LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 SUPERFAMILY SSF52540 4 226 8.05E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Gene3D G3DSA:1.10.3710.10 333 423 1.8E-25 T 22-04-2016 LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Gene3D G3DSA:1.20.272.10 235 332 1.5E-40 T 22-04-2016 LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Pfam PF16193 AAA C-terminal domain 173 253 8.2E-23 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Gene3D G3DSA:3.40.50.300 2 140 6.7E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 418 7.2E-64 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 43 145 6.5E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 SMART SM00382 39 151 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 Gene3D G3DSA:1.10.8.60 141 208 3.1E-8 T 22-04-2016 LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 PANTHER PTHR13779:SF7 3 425 5.1E-153 T 22-04-2016 LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 SUPERFAMILY SSF48019 239 419 3.06E-70 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LMES_RS08305 69e18ab0e4f1b60bc4bb11cfe16d1e18 428 PANTHER PTHR13779 3 425 5.1E-153 T 22-04-2016 LMES_RS03340 01d075b3fe06d38301d57161e13b7a55 217 PANTHER PTHR23029:SF1 5 208 1.5E-36 T 22-04-2016 LMES_RS03340 01d075b3fe06d38301d57161e13b7a55 217 SMART SM00855 3 162 1.8E-14 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS03340 01d075b3fe06d38301d57161e13b7a55 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 204 5.8E-45 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS03340 01d075b3fe06d38301d57161e13b7a55 217 PANTHER PTHR23029 5 208 1.5E-36 T 22-04-2016 LMES_RS03340 01d075b3fe06d38301d57161e13b7a55 217 SUPERFAMILY SSF53254 1 210 2.49E-44 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS03340 01d075b3fe06d38301d57161e13b7a55 217 Gene3D G3DSA:3.40.50.1240 1 214 3.2E-49 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 Gene3D G3DSA:3.40.50.2020 286 454 1.5E-39 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 Pfam PF13537 Glutamine amidotransferase domain 111 227 1.7E-17 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 Gene3D G3DSA:3.60.20.10 29 272 3.5E-60 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 28 477 43.214 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 SUPERFAMILY SSF56235 29 254 1.29E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 PANTHER PTHR11907 26 489 5.9E-208 T 22-04-2016 LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 29 476 7.2E-144 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 SUPERFAMILY SSF53271 267 482 7.34E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 PANTHER PTHR11907:SF0 26 489 5.9E-208 T 22-04-2016 LMES_RS03480 9c074ca1b9b3ddd28d77292ce767de2b 536 PIRSF PIRSF000485 25 489 4.2E-157 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LMES_RS09375 e0bd868d1d4ce7314638e719cf9b07c2 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS09375 e0bd868d1d4ce7314638e719cf9b07c2 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.4E-21 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS09375 e0bd868d1d4ce7314638e719cf9b07c2 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.357 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS09375 e0bd868d1d4ce7314638e719cf9b07c2 44 PANTHER PTHR14503 1 44 1.0E-19 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS09375 e0bd868d1d4ce7314638e719cf9b07c2 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 2 42 3.0E-14 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS09375 e0bd868d1d4ce7314638e719cf9b07c2 44 Pfam PF00468 Ribosomal protein L34 1 44 3.7E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02250 7658520d469db8eaef167e928e6ed4c6 321 PANTHER PTHR16119 3 305 2.6E-53 T 22-04-2016 LMES_RS02250 7658520d469db8eaef167e928e6ed4c6 321 SUPERFAMILY SSF103481 41 134 2.88E-7 T 22-04-2016 LMES_RS02250 7658520d469db8eaef167e928e6ed4c6 321 Pfam PF06800 Sugar transport protein 6 306 6.7E-70 T 22-04-2016 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 LMES_RS02250 7658520d469db8eaef167e928e6ed4c6 321 PANTHER PTHR16119:SF19 3 305 2.6E-53 T 22-04-2016 LMES_RS06245 6f44e182fc64a0acdea910a330309970 383 Pfam PF00535 Glycosyl transferase family 2 9 168 1.6E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS06245 6f44e182fc64a0acdea910a330309970 383 Gene3D G3DSA:3.90.550.10 6 202 7.5E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06245 6f44e182fc64a0acdea910a330309970 383 PANTHER PTHR22916:SF32 1 304 5.6E-35 T 22-04-2016 LMES_RS06245 6f44e182fc64a0acdea910a330309970 383 PANTHER PTHR22916 1 304 5.6E-35 T 22-04-2016 LMES_RS06245 6f44e182fc64a0acdea910a330309970 383 SUPERFAMILY SSF53448 7 212 9.19E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 Gene3D G3DSA:4.10.520.10 3 91 1.7E-40 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.3E-36 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 SUPERFAMILY SSF47729 3 91 2.65E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 SMART SM00411 2 91 3.8E-50 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 4.5E-22 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 4.5E-22 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 4.5E-22 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LMES_RS05595 1a4e81790d65563a8f765d250458a3a6 91 PANTHER PTHR33175 1 91 3.1E-46 T 22-04-2016 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 Pfam PF00137 ATP synthase subunit C 9 72 4.1E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 Gene3D G3DSA:1.20.20.10 4 73 2.1E-23 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 PRINTS PR00124 ATP synthase C subunit signature 10 29 6.3E-16 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 PRINTS PR00124 ATP synthase C subunit signature 48 73 6.3E-16 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 PRINTS PR00124 ATP synthase C subunit signature 31 46 6.3E-16 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 75 14.691 T 22-04-2016 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 73 1.7E-18 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 SUPERFAMILY SSF81333 4 74 3.14E-17 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site LMES_RS08420 c99c355b5d0dddb5529230219b35796e 75 PANTHER PTHR10031 8 73 7.4E-14 T 22-04-2016 LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 297 3.2E-12 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 SUPERFAMILY SSF52540 5 255 3.17E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 3.5E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 SMART SM00382 34 234 2.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 PANTHER PTHR24220 7 326 9.9E-161 T 22-04-2016 LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 Pfam PF00005 ABC transporter 26 184 3.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 Gene3D G3DSA:3.40.50.300 4 258 5.8E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08705 cc45a98dbaf88b29997ff546f23ee14b 349 PANTHER PTHR24220:SF535 7 326 9.9E-161 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 SMART SM00480 17 371 4.0E-125 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 Gene3D G3DSA:3.10.150.10 1 127 8.4E-28 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 PANTHER PTHR30478 2 378 1.4E-108 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 SUPERFAMILY SSF55979 1 125 4.49E-23 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 SUPERFAMILY SSF55979 252 377 2.38E-28 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 PIRSF PIRSF000804 1 378 4.9E-104 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 Gene3D G3DSA:3.10.150.10 256 377 4.2E-32 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 3.8E-100 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 Gene3D G3DSA:3.10.150.10 131 255 3.8E-33 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 125 5.4E-31 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 135 250 1.4E-30 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 SUPERFAMILY SSF55979 132 253 1.96E-22 T 22-04-2016 LMES_RS00010 24d976a89f2e0249f6cbf21120c1d264 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 371 1.1E-29 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:2.70.20.10 204 335 4.4E-28 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:2.70.20.10 338 473 5.3E-32 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 25 628 7.1E-234 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PANTHER PTHR11390 21 682 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:1.10.460.10 155 202 2.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:1.10.460.10 637 640 2.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:1.10.460.10 474 578 2.4E-56 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:3.40.50.140 22 154 2.0E-43 T 22-04-2016 IPR006171 Toprim domain LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 SMART SM00493 23 123 1.2E-28 T 22-04-2016 IPR006171 Toprim domain LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PANTHER PTHR11390:SF27 21 682 0.0 T 22-04-2016 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Pfam PF01131 DNA topoisomerase 148 565 3.9E-124 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 SMART SM00437 263 527 7.5E-111 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 SMART SM00436 124 212 2.7E-46 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 SUPERFAMILY SSF57783 592 630 3.74E-12 T 22-04-2016 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Hamap MF_00952 DNA topoisomerase 1 [topA]. 23 650 52.217 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Pfam PF01751 Toprim domain 25 133 1.8E-30 T 22-04-2016 IPR006171 Toprim domain LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Gene3D G3DSA:3.30.65.10 591 636 2.7E-17 T 22-04-2016 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 SUPERFAMILY SSF56712 23 606 6.15E-187 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 4.9E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 392 408 4.9E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 4.9E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 97 110 4.9E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 182 200 4.9E-35 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 595 629 3.8E-13 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LMES_RS03585 77149698031c1b583a181dbef8fbba89 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 635 672 2.6E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LMES_RS01305 410167952f085a6e0ee6cc174c90584f 300 PANTHER PTHR11669:SF8 24 182 1.3E-23 T 22-04-2016 LMES_RS01305 410167952f085a6e0ee6cc174c90584f 300 PANTHER PTHR11669 24 182 1.3E-23 T 22-04-2016 LMES_RS01305 410167952f085a6e0ee6cc174c90584f 300 Pfam PF13177 DNA polymerase III, delta subunit 15 162 3.5E-33 T 22-04-2016 LMES_RS01305 410167952f085a6e0ee6cc174c90584f 300 SUPERFAMILY SSF52540 15 161 3.8E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01305 410167952f085a6e0ee6cc174c90584f 300 Gene3D G3DSA:3.40.50.300 16 162 4.2E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08820 9ef22ad4128fb8acf75e6a6a4bfdce1f 165 PANTHER PTHR10681:SF81 5 164 1.3E-36 T 22-04-2016 LMES_RS08820 9ef22ad4128fb8acf75e6a6a4bfdce1f 165 Pfam PF00578 AhpC/TSA family 19 140 3.9E-20 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LMES_RS08820 9ef22ad4128fb8acf75e6a6a4bfdce1f 165 SUPERFAMILY SSF52833 3 157 2.42E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS08820 9ef22ad4128fb8acf75e6a6a4bfdce1f 165 PANTHER PTHR10681 5 164 1.3E-36 T 22-04-2016 LMES_RS08820 9ef22ad4128fb8acf75e6a6a4bfdce1f 165 Gene3D G3DSA:3.40.30.10 2 162 7.5E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 271 5.3E-47 T 22-04-2016 IPR000150 Cof protein GO:0016787 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 271 2.4E-53 T 22-04-2016 IPR023214 HAD-like domain LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 PANTHER PTHR10000:SF8 1 277 2.3E-43 T 22-04-2016 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 243 5.8E-23 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 Gene3D G3DSA:3.30.1240.10 91 189 6.8E-11 T 22-04-2016 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 Gene3D G3DSA:3.40.50.1000 1 76 2.1E-42 T 22-04-2016 IPR023214 HAD-like domain LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 Gene3D G3DSA:3.40.50.1000 190 274 2.1E-42 T 22-04-2016 IPR023214 HAD-like domain LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 SUPERFAMILY SSF56784 1 274 1.43E-62 T 22-04-2016 IPR023214 HAD-like domain LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 13 27 1.9E-5 T 22-04-2016 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 224 243 1.9E-5 T 22-04-2016 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 247 259 1.9E-5 T 22-04-2016 LMES_RS02590 dfce3882edf24a43e5cf705e61e50af1 277 PANTHER PTHR10000 1 277 2.3E-43 T 22-04-2016 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.466 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 494 6.4E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.5E-69 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 PANTHER PTHR15184 1 485 2.5E-290 T 22-04-2016 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 1.6E-18 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Gene3D G3DSA:1.20.150.20 372 498 3.1E-50 T 22-04-2016 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 SUPERFAMILY SSF50615 10 94 1.23E-27 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 SUPERFAMILY SSF47917 372 498 6.54E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 2.5E-247 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 PANTHER PTHR15184:SF3 1 485 2.5E-290 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Gene3D G3DSA:2.40.30.20 2 93 1.8E-34 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 PIRSF PIRSF039088 1 501 3.5E-238 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 Gene3D G3DSA:3.40.50.300 94 371 3.1E-113 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08405 032769162f3c075fcac3eab3c31f4d24 505 SUPERFAMILY SSF52540 95 370 2.1E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 682 698 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 SMART SM00533 276 584 2.1E-101 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 SUPERFAMILY SSF55271 5 114 2.62E-41 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 PANTHER PTHR11361 5 851 0.0 T 22-04-2016 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Gene3D G3DSA:1.10.1420.10 255 460 5.7E-55 T 22-04-2016 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 SUPERFAMILY SSF52540 560 793 5.84E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Gene3D G3DSA:3.40.1170.10 6 118 1.8E-47 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Pfam PF05190 MutS family domain IV 420 510 5.8E-27 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Gene3D G3DSA:3.30.420.110 126 252 2.8E-23 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 845 23.674 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Pfam PF05192 MutS domain III 262 552 3.0E-43 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 SUPERFAMILY SSF53150 117 271 5.36E-26 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Pfam PF00488 MutS domain V 604 791 5.6E-80 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 PANTHER PTHR11361:SF86 5 851 0.0 T 22-04-2016 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Pfam PF05188 MutS domain II 127 204 5.7E-9 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 SMART SM00534 601 789 1.1E-108 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Pfam PF01624 MutS domain I 7 116 8.5E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 SUPERFAMILY SSF48334 260 557 1.44E-84 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LMES_RS07040 332a61ca146b8195e7b761f8f08d005a 854 Gene3D G3DSA:3.40.50.300 561 793 1.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05525 01cf3bd95890e3f617372494885092fd 288 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 283 2.6E-72 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 LMES_RS05525 01cf3bd95890e3f617372494885092fd 288 PANTHER PTHR32039:SF8 55 284 2.2E-80 T 22-04-2016 LMES_RS05525 01cf3bd95890e3f617372494885092fd 288 SUPERFAMILY SSF102405 78 283 4.58E-32 T 22-04-2016 LMES_RS05525 01cf3bd95890e3f617372494885092fd 288 Pfam PF02481 DNA recombination-mediator protein A 71 275 4.8E-74 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 LMES_RS05525 01cf3bd95890e3f617372494885092fd 288 PANTHER PTHR32039 55 284 2.2E-80 T 22-04-2016 LMES_RS05525 01cf3bd95890e3f617372494885092fd 288 Gene3D G3DSA:3.40.50.450 111 260 1.3E-7 T 22-04-2016 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 SUPERFAMILY SSF50677 227 413 1.57E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Pfam PF08264 Anticodon-binding domain of tRNA 661 771 3.6E-20 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Gene3D G3DSA:3.90.740.10 224 422 9.1E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 SUPERFAMILY SSF52374 414 628 7.27E-135 T 22-04-2016 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 SUPERFAMILY SSF52374 1 227 7.27E-135 T 22-04-2016 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 807 22.587 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 222 402 6.3E-69 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 2.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 2.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 2.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 2.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 2.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 2.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 807 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Gene3D G3DSA:3.40.50.620 423 608 4.3E-159 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Gene3D G3DSA:3.40.50.620 1 223 4.3E-159 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 415 606 4.5E-20 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Gene3D G3DSA:1.10.730.10 609 743 1.7E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 SUPERFAMILY SSF47323 624 807 7.66E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946:SF7 1 208 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946:SF7 289 454 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946:SF7 474 807 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946:SF7 241 266 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 Pfam PF09334 tRNA synthetases class I (M) 34 157 3.9E-17 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946 1 208 0.0 T 22-04-2016 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946 289 454 0.0 T 22-04-2016 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946 474 807 0.0 T 22-04-2016 LMES_RS03045 7ac62c6eff24437ff1b6702471d414ab 808 PANTHER PTHR11946 241 266 0.0 T 22-04-2016 LMES_RS03595 9f24920f119833ca6adbbf887f0ad429 167 Pfam PF12685 SpoIIIAH-like protein 20 118 5.1E-7 T 22-04-2016 IPR024232 Stage III sporulation protein AH-like LMES_RS03595 9f24920f119833ca6adbbf887f0ad429 167 Gene3D G3DSA:3.30.700.10 24 154 8.4E-4 T 22-04-2016 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 Pfam PF02504 Fatty acid synthesis protein 1 320 1.7E-105 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 Gene3D G3DSA:3.40.718.10 1 330 7.1E-127 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 PIRSF PIRSF002465 1 336 3.9E-118 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 PANTHER PTHR30100 1 338 9.0E-117 T 22-04-2016 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 332 7.6E-109 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 PANTHER PTHR30100:SF1 1 338 9.0E-117 T 22-04-2016 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 SUPERFAMILY SSF53659 1 328 3.17E-97 T 22-04-2016 LMES_RS02575 17bd84ac909fcf3fd2187499c5fdbd73 348 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 336 138.781 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LMES_RS08725 3ef5cdf513f9f0906ad65ca84554a5f0 219 PANTHER PTHR30614 9 217 7.2E-76 T 22-04-2016 LMES_RS08725 3ef5cdf513f9f0906ad65ca84554a5f0 219 PANTHER PTHR30614:SF12 9 217 7.2E-76 T 22-04-2016 LMES_RS08725 3ef5cdf513f9f0906ad65ca84554a5f0 219 Gene3D G3DSA:1.10.3720.10 15 218 2.6E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08725 3ef5cdf513f9f0906ad65ca84554a5f0 219 SUPERFAMILY SSF161098 17 203 3.27E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08725 3ef5cdf513f9f0906ad65ca84554a5f0 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 112 6.2E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS08725 3ef5cdf513f9f0906ad65ca84554a5f0 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 218 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 355 4.5E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 Pfam PF01434 Peptidase family M41 417 623 6.9E-72 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 Gene3D G3DSA:1.10.8.60 366 429 5.6E-27 T 22-04-2016 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 132 623 2.5E-219 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 638 35.66 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 SUPERFAMILY SSF140990 438 624 4.84E-63 T 22-04-2016 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 PANTHER PTHR23076 8 700 5.9E-283 T 22-04-2016 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 Pfam PF06480 FtsH Extracellular 13 123 8.8E-10 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 PANTHER PTHR23076:SF10 8 700 5.9E-283 T 22-04-2016 LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 SMART SM00382 219 358 8.5E-22 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 SUPERFAMILY SSF52540 181 426 4.83E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01915 3df90e27c2ad9b5e95bc2fd55a131fac 700 Gene3D G3DSA:3.40.50.300 180 365 2.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09420 983f99d7c7df6cc5ecc4bae5da30d983 98 Gene3D G3DSA:3.40.50.1820 11 96 1.9E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS09420 983f99d7c7df6cc5ecc4bae5da30d983 98 SUPERFAMILY SSF53474 10 94 9.66E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 Gene3D G3DSA:3.40.50.2300 174 306 3.9E-33 T 22-04-2016 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.5E-11 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 PANTHER PTHR30146 1 308 1.1E-72 T 22-04-2016 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 SUPERFAMILY SSF47413 3 60 1.69E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 SUPERFAMILY SSF53822 59 307 5.44E-49 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 SMART SM00354 2 72 2.0E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 Gene3D G3DSA:3.40.50.2300 55 173 1.6E-29 T 22-04-2016 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 Gene3D G3DSA:1.10.260.40 3 54 2.7E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04290 404a095ac97ce1da584b45995f86081a 335 Pfam PF13377 Periplasmic binding protein-like domain 170 308 1.7E-24 T 22-04-2016 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 SUPERFAMILY SSF52374 10 105 1.01E-21 T 22-04-2016 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 SUPERFAMILY SSF52374 190 223 1.01E-21 T 22-04-2016 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 PANTHER PTHR37825 2 350 6.6E-90 T 22-04-2016 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 Pfam PF05636 HIGH Nucleotidyl Transferase 1 375 3.9E-130 T 22-04-2016 IPR008513 Uncharacterised protein family UPF0348 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 58 6.1E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 Gene3D G3DSA:3.40.50.620 1 225 6.2E-80 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 Hamap MF_01539 UPF0348 protein . 2 387 39.016 T 22-04-2016 IPR008513 Uncharacterised protein family UPF0348 LMES_RS07750 04a9b33689a5dda597b8cdbe0c390284 390 PANTHER PTHR37825:SF1 2 350 6.6E-90 T 22-04-2016 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SUPERFAMILY SSF52440 551 668 8.49E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 6.7E-75 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 4.0E-40 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SMART SM00851 949 1036 1.6E-21 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.40.50.20 3 108 3.6E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PANTHER PTHR11405 1 1050 0.0 T 22-04-2016 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:1.10.1030.10 399 531 3.5E-46 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SMART SM01096 420 540 2.9E-60 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.40.50.1380 931 1056 1.3E-33 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SUPERFAMILY SSF52440 1 127 2.45E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PANTHER PTHR11405:SF5 1 1050 0.0 T 22-04-2016 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.40.50.20 532 655 5.5E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1058 13.188 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SUPERFAMILY SSF56059 128 399 6.19E-106 T 22-04-2016 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Pfam PF02142 MGS-like domain 950 1036 3.1E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SUPERFAMILY SSF48108 395 546 3.01E-46 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 12.879 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.30.470.20 738 927 1.3E-70 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.30.470.20 201 398 7.8E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.30.1490.20 679 737 1.1E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Gene3D G3DSA:3.30.1490.20 142 200 2.0E-21 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SMART SM01209 672 837 0.007 T 22-04-2016 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.5E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SUPERFAMILY SSF52335 930 1051 4.32E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 SUPERFAMILY SSF56059 666 927 1.7E-99 T 22-04-2016 LMES_RS05315 bd5490e8049199d671216f170d4f0eae 1059 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 540 2.2E-36 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS00030 415414971ac69e572842aa833212f596 848 Gene3D G3DSA:3.30.1360.40 237 333 2.4E-37 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LMES_RS00030 415414971ac69e572842aa833212f596 848 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 809 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 812 28.958 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 SUPERFAMILY SSF56719 32 487 4.19E-179 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LMES_RS00030 415414971ac69e572842aa833212f596 848 SUPERFAMILY SSF101904 500 820 4.58E-105 T 22-04-2016 LMES_RS00030 415414971ac69e572842aa833212f596 848 PANTHER PTHR10169:SF48 5 778 0.0 T 22-04-2016 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 759 2.1E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 505 550 4.4E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 762 808 2.9E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 657 4.3E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 705 6.3E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 1.1E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 PANTHER PTHR10169 5 778 0.0 T 22-04-2016 LMES_RS00030 415414971ac69e572842aa833212f596 848 Gene3D G3DSA:3.90.199.10 334 399 2.5E-120 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Gene3D G3DSA:3.90.199.10 32 236 2.5E-120 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 470 7.4E-159 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 SMART SM00434 12 465 1.1E-277 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00030 415414971ac69e572842aa833212f596 848 Gene3D G3DSA:2.120.10.90 497 808 8.7E-121 T 22-04-2016 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 309 1.8E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 50.545 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 409 7.2E-190 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 SMART SM00382 110 271 7.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 393 1.9E-17 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Pfam PF06689 ClpX C4-type zinc finger 12 49 4.9E-18 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Gene3D G3DSA:3.40.50.300 292 309 1.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Gene3D G3DSA:3.40.50.300 64 252 1.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 SUPERFAMILY SSF57716 11 47 2.85E-9 T 22-04-2016 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 PANTHER PTHR11262 3 413 6.1E-233 T 22-04-2016 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 Gene3D G3DSA:1.10.8.60 314 414 3.2E-36 T 22-04-2016 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 SMART SM00994 10 50 1.0E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 SUPERFAMILY SSF52540 62 401 1.31E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06740 4fa82898bc0fe82936a4113dbea49a86 416 SMART SM01086 315 409 8.0E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 SUPERFAMILY SSF75445 133 207 1.83E-19 T 22-04-2016 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 222 4.1E-76 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 Gene3D G3DSA:3.40.50.1360 8 144 1.5E-52 T 22-04-2016 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 Gene3D G3DSA:3.30.70.260 145 205 2.4E-20 T 22-04-2016 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 5 225 31.361 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 221 1.2E-55 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 SUPERFAMILY SSF100950 5 146 1.09E-39 T 22-04-2016 LMES_RS00700 cd9ac00f8ddaa839bd8b30d75caca585 228 PANTHER PTHR11934 4 227 2.1E-82 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 9.9E-34 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LMES_RS01485 5b875586f022a5671e971a2b42760341 458 Gene3D G3DSA:3.30.1490.20 130 202 1.0E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 SUPERFAMILY SSF51246 331 445 3.09E-34 T 22-04-2016 IPR011054 Rudiment single hybrid motif LMES_RS01485 5b875586f022a5671e971a2b42760341 458 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 4.7E-67 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 SUPERFAMILY SSF52440 1 113 3.74E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS01485 5b875586f022a5671e971a2b42760341 458 Gene3D G3DSA:3.30.470.20 204 446 1.7E-86 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 SMART SM00878 336 443 9.5E-44 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal LMES_RS01485 5b875586f022a5671e971a2b42760341 458 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.2E-43 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LMES_RS01485 5b875586f022a5671e971a2b42760341 458 SUPERFAMILY SSF56059 83 350 1.52E-63 T 22-04-2016 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 Gene3D G3DSA:3.40.50.20 1 129 6.7E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS01485 5b875586f022a5671e971a2b42760341 458 PANTHER PTHR18866 1 443 8.9E-243 T 22-04-2016 LMES_RS01485 5b875586f022a5671e971a2b42760341 458 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 3.5E-189 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 SUPERFAMILY SSF53474 65 197 2.77E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 SUPERFAMILY SSF53474 236 307 2.77E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 PANTHER PTHR12277:SF68 66 307 2.3E-79 T 22-04-2016 LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 Pfam PF12146 Serine aminopeptidase, S33 87 194 3.7E-8 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 Gene3D G3DSA:3.40.50.1820 56 196 9.2E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 Gene3D G3DSA:3.40.50.1820 237 307 9.2E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02345 60790952446c37bd79f33dd5f5aee45e 309 PANTHER PTHR12277 66 307 2.3E-79 T 22-04-2016 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 SUPERFAMILY SSF51366 1 229 2.67E-58 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 SMART SM00934 5 225 1.5E-78 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 PANTHER PTHR32119 1 230 1.2E-82 T 22-04-2016 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 Gene3D G3DSA:3.20.20.70 4 230 2.8E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 PANTHER PTHR32119:SF2 1 230 1.2E-82 T 22-04-2016 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 230 33.278 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 225 8.9E-53 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05310 95aa7609b869de972f393a871c6d0168 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 224 5.5E-41 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 423 38.537 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 422 7.1E-141 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PANTHER PTHR11482:SF5 1 430 1.2E-149 T 22-04-2016 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PANTHER PTHR11482 1 430 1.2E-149 T 22-04-2016 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 Gene3D G3DSA:3.20.20.10 37 276 8.9E-74 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 Gene3D G3DSA:2.40.37.10 277 423 5.6E-49 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 47 289 5.4E-50 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 298 399 3.4E-13 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 59 77 2.5E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 194 207 2.5E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 380 393 2.5E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 79 91 2.5E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 279 298 2.5E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 SUPERFAMILY SSF51419 26 291 3.93E-73 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 77 94 5.1E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 390 412 5.1E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 166 175 5.1E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 PRINTS PR01181 Diaminopimelate decarboxylase signature 308 326 5.1E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03200 9f7f4b512db0e5787766331adf612a20 430 SUPERFAMILY SSF50621 267 422 4.81E-51 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 Pfam PF00842 Alanine racemase, C-terminal domain 249 373 2.3E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 SUPERFAMILY SSF50621 244 373 1.36E-45 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 TIGRFAM TIGR00492 alr: alanine racemase 10 373 1.1E-94 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 Pfam PF01168 Alanine racemase, N-terminal domain 16 235 1.9E-56 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 Hamap MF_01201 Alanine racemase. 9 373 30.291 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 Gene3D G3DSA:2.40.37.10 228 373 1.7E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 208 235 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 282 297 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 167 178 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 302 319 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 265 280 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 356 369 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 132 144 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PRINTS PR00992 Alanine racemase signature 34 50 2.9E-47 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 SUPERFAMILY SSF51419 16 250 8.83E-58 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PANTHER PTHR30511 9 373 4.8E-124 T 22-04-2016 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 Gene3D G3DSA:3.20.20.10 18 227 1.9E-60 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 SMART SM01005 249 373 7.8E-58 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 39 49 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08135 2c6eea92e57f76e3e8b8e8e2e5eabf47 373 PANTHER PTHR30511:SF0 9 373 4.8E-124 T 22-04-2016 LMES_RS06885 3a75dfc1a157d11612746dec0f367625 234 Pfam PF03070 TENA/THI-4/PQQC family 9 217 1.3E-37 T 22-04-2016 IPR004305 Thiaminase-2/PQQC LMES_RS06885 3a75dfc1a157d11612746dec0f367625 234 SUPERFAMILY SSF48613 2 224 2.52E-57 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LMES_RS06885 3a75dfc1a157d11612746dec0f367625 234 Gene3D G3DSA:1.20.910.10 1 229 1.4E-60 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LMES_RS06885 3a75dfc1a157d11612746dec0f367625 234 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 10 218 3.5E-50 T 22-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 LMES_RS06885 3a75dfc1a157d11612746dec0f367625 234 PANTHER PTHR20858 1 180 1.0E-38 T 22-04-2016 LMES_RS06885 3a75dfc1a157d11612746dec0f367625 234 PANTHER PTHR20858:SF20 1 180 1.0E-38 T 22-04-2016 LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 PIRSF PIRSF004793 3 268 1.9E-85 T 22-04-2016 IPR014046 Diadenylate cyclase-like LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 Gene3D G3DSA:3.40.1700.10 110 239 6.7E-54 T 22-04-2016 LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 11 252 1.3E-82 T 22-04-2016 IPR014046 Diadenylate cyclase-like LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 117 234 7.4E-43 T 22-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 PANTHER PTHR34185:SF1 1 267 5.0E-98 T 22-04-2016 LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 SUPERFAMILY SSF143597 40 239 9.68E-69 T 22-04-2016 LMES_RS07005 474d0038fffb0cf03e0061cd8010768f 273 PANTHER PTHR34185 1 267 5.0E-98 T 22-04-2016 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 474 4.9E-22 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 Gene3D G3DSA:3.30.420.40 12 266 5.9E-25 T 22-04-2016 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 PANTHER PTHR10196 7 537 1.1E-153 T 22-04-2016 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 PANTHER PTHR10196:SF61 7 537 1.1E-153 T 22-04-2016 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 16 239 2.0E-15 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 SUPERFAMILY SSF53067 273 519 9.5E-9 T 22-04-2016 LMES_RS04130 70680a284fd97e98ddebb1d7ac5a83ac 539 SUPERFAMILY SSF53067 16 261 5.7E-27 T 22-04-2016 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Gene3D G3DSA:3.40.1440.10 20 95 4.0E-11 T 22-04-2016 IPR027299 GIY-YIG domain LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 SUPERFAMILY SSF46600 186 239 7.45E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 6 592 25.802 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 SMART SM00465 19 99 2.8E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 PANTHER PTHR30562:SF1 2 593 2.8E-220 T 22-04-2016 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 PANTHER PTHR30562 2 593 2.8E-220 T 22-04-2016 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Gene3D G3DSA:1.10.150.20 542 593 5.1E-17 T 22-04-2016 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 SUPERFAMILY SSF82771 20 98 1.31E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 528 4.5E-42 T 22-04-2016 IPR001162 UvrC family homology region LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Pfam PF01541 GIY-YIG catalytic domain 21 94 4.1E-10 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Pfam PF02151 UvrB/uvrC motif 202 233 2.6E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Gene3D G3DSA:4.10.860.10 180 239 3.0E-15 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 SUPERFAMILY SSF47781 506 590 2.32E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 Pfam PF14520 Helix-hairpin-helix domain 543 593 7.7E-8 T 22-04-2016 LMES_RS02485 5e4994af616a7ce5c4847810724fa284 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 574 2.7E-176 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 PANTHER PTHR11758 1 132 5.3E-67 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 Gene3D G3DSA:3.30.1370.30 2 73 4.6E-31 T 22-04-2016 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 Pfam PF00410 Ribosomal protein S8 5 132 1.8E-53 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.688 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 SUPERFAMILY SSF56047 2 132 1.57E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LMES_RS00965 79da49550e19327c30472f9c6179321b 132 Gene3D G3DSA:3.30.1490.10 76 132 1.3E-29 T 22-04-2016 LMES_RS03265 59b419812adaf546b804bd6328ea9fe1 299 PANTHER PTHR11079:SF73 37 298 1.9E-74 T 22-04-2016 LMES_RS03265 59b419812adaf546b804bd6328ea9fe1 299 PANTHER PTHR11079 37 298 1.9E-74 T 22-04-2016 LMES_RS03265 59b419812adaf546b804bd6328ea9fe1 299 Pfam PF00849 RNA pseudouridylate synthase 86 241 1.5E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS03265 59b419812adaf546b804bd6328ea9fe1 299 SUPERFAMILY SSF55120 73 296 3.36E-67 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS03265 59b419812adaf546b804bd6328ea9fe1 299 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 130 144 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS03265 59b419812adaf546b804bd6328ea9fe1 299 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 295 3.1E-67 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 PIRSF PIRSF001604 8 678 2.8E-236 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Pfam PF14520 Helix-hairpin-helix domain 454 506 5.6E-5 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Hamap MF_01588 DNA ligase [ligA]. 14 674 48.974 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 601 672 7.1E-11 T 22-04-2016 IPR001357 BRCT domain LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Gene3D G3DSA:2.40.50.140 326 397 2.8E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Gene3D G3DSA:3.30.470.30 130 259 2.2E-48 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SUPERFAMILY SSF56091 13 325 8.43E-111 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Gene3D G3DSA:1.10.287.610 7 77 8.4E-23 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SUPERFAMILY SSF47781 411 590 4.45E-58 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SUPERFAMILY SSF50249 324 406 1.71E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SMART SM00292 600 677 1.3E-7 T 22-04-2016 IPR001357 BRCT domain LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 23 670 3.1E-241 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 325 1.3E-115 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Gene3D G3DSA:1.10.150.20 441 509 2.5E-25 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 329 405 4.7E-33 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Pfam PF12826 Helix-hairpin-helix motif 516 578 2.9E-21 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 338 353 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 415 440 1.3E-7 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 126 155 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SMART SM00278 486 505 1900.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SMART SM00278 452 471 73.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SMART SM00278 550 569 75.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Gene3D G3DSA:3.40.50.10190 598 672 8.8E-20 T 22-04-2016 IPR001357 BRCT domain LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 Gene3D G3DSA:1.10.150.20 510 589 1.4E-24 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SMART SM00532 15 454 6.7E-262 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 SUPERFAMILY SSF52113 599 672 3.05E-16 T 22-04-2016 IPR001357 BRCT domain LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 PANTHER PTHR23389:SF9 9 538 1.8E-174 T 22-04-2016 LMES_RS02730 fe432ce08b9a65510307e41590804ee5 680 PANTHER PTHR23389 9 538 1.8E-174 T 22-04-2016 LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 SUPERFAMILY SSF53383 9 388 1.12E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 PANTHER PTHR11751 7 390 1.4E-113 T 22-04-2016 LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 Gene3D G3DSA:3.40.640.10 48 272 9.3E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 Pfam PF00155 Aminotransferase class I and II 32 378 7.9E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 PANTHER PTHR11751:SF417 7 390 1.4E-113 T 22-04-2016 LMES_RS05885 6e5b8893ed11e3f65ef976de0757b575 391 Gene3D G3DSA:3.90.1150.10 273 389 3.8E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 PANTHER PTHR21237:SF23 2 189 6.6E-47 T 22-04-2016 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 PANTHER PTHR21237 2 189 6.6E-47 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 ProSitePatterns PS01071 grpE protein signature. 144 187 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 Hamap MF_01151 Protein GrpE [grpE]. 3 189 20.352 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 SUPERFAMILY SSF58014 39 133 1.57E-22 T 22-04-2016 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 Gene3D G3DSA:2.30.22.10 133 189 2.2E-24 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 Pfam PF01025 GrpE 27 189 4.3E-48 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 PRINTS PR00773 GrpE protein signature 59 75 1.0E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 PRINTS PR00773 GrpE protein signature 168 187 1.0E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 PRINTS PR00773 GrpE protein signature 141 156 1.0E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 PRINTS PR00773 GrpE protein signature 87 102 1.0E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 SUPERFAMILY SSF51064 135 189 4.58E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 LMES_RS05860 02ad4ceb34aeb53d796171b9276477f8 189 Gene3D G3DSA:3.90.20.20 36 131 4.7E-27 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil LMES_RS07835 cf7930615700c23be6acd6b90ba4ef16 135 Pfam PF06114 Domain of unknown function (DUF955) 28 96 8.3E-7 T 22-04-2016 IPR010359 HTH domain, IrrE-type LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 Pfam PF03471 Transporter associated domain 357 434 3.8E-8 T 22-04-2016 IPR005170 Transporter-associated domain LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 Pfam PF01595 Domain of unknown function DUF21 13 204 3.3E-34 T 22-04-2016 IPR002550 Domain of unknown function DUF21 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 SMART SM00116 229 279 0.95 T 22-04-2016 IPR000644 CBS domain LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 SMART SM00116 292 340 21.0 T 22-04-2016 IPR000644 CBS domain LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 SUPERFAMILY SSF56176 354 433 4.91E-12 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 Gene3D G3DSA:3.10.580.10 208 347 1.3E-22 T 22-04-2016 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 Gene3D G3DSA:3.30.465.10 355 434 3.0E-16 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 PANTHER PTHR22777:SF18 5 452 1.3E-100 T 22-04-2016 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 SUPERFAMILY SSF54631 210 350 2.78E-28 T 22-04-2016 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 Pfam PF00571 CBS domain 286 339 6.5E-7 T 22-04-2016 IPR000644 CBS domain LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 Pfam PF00571 CBS domain 227 276 2.5E-4 T 22-04-2016 IPR000644 CBS domain LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 PANTHER PTHR22777 5 452 1.3E-100 T 22-04-2016 LMES_RS01165 b77ee8080199db2d71bb4dc0072ff5c3 466 SMART SM01091 356 436 4.5E-11 T 22-04-2016 IPR005170 Transporter-associated domain LMES_RS08175 7beab7aad7b3465fd1f700dd03f34260 278 Gene3D G3DSA:3.40.50.1820 38 266 3.7E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS08175 7beab7aad7b3465fd1f700dd03f34260 278 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 31 267 1.2E-68 T 22-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like LMES_RS08175 7beab7aad7b3465fd1f700dd03f34260 278 SUPERFAMILY SSF53474 42 266 1.18E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 359 2.1E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PANTHER PTHR24423:SF526 7 16 4.5E-70 T 22-04-2016 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PANTHER PTHR24423:SF526 68 360 4.5E-70 T 22-04-2016 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 Gene3D G3DSA:3.30.565.10 211 359 1.6E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 SUPERFAMILY SSF55874 192 358 2.62E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PANTHER PTHR24423 7 16 4.5E-70 T 22-04-2016 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PANTHER PTHR24423 68 360 4.5E-70 T 22-04-2016 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 357 3.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 3.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 314 3.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 339 3.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 Gene3D G3DSA:1.10.287.130 128 198 2.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 SMART SM00387 249 360 2.3E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 SUPERFAMILY SSF47384 121 202 5.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 136 202 3.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS01655 0f9f59e3bee94b74a1d5defc1bd38249 361 SMART SM00388 136 203 1.6E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 SUPERFAMILY SSF52540 66 284 7.19E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 Gene3D G3DSA:2.40.50.140 1 61 6.0E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 279 5.2E-70 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 Gene3D G3DSA:1.10.40.50 227 292 1.3E-23 T 22-04-2016 LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 PANTHER PTHR32120:SF2 1 289 7.8E-107 T 22-04-2016 LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 SUPERFAMILY SSF50249 1 63 2.47E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 Pfam PF16745 RsgA N-terminal domain 3 55 2.4E-18 T 22-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 Gene3D G3DSA:3.40.50.300 66 221 6.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 2 288 36.821 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 PANTHER PTHR32120 1 289 7.8E-107 T 22-04-2016 LMES_RS06685 0e80d70bd671ccac877a1055046bc996 295 Pfam PF03193 Protein of unknown function, DUF258 59 223 6.9E-57 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 LMES_RS02215 05fccd709ba24b52522fce2648ab7098 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 3.7E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LMES_RS07485 5f84c0199e237024d21aa2f3de002fa4 68 SMART SM00530 8 64 0.0097 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS07485 5f84c0199e237024d21aa2f3de002fa4 68 SUPERFAMILY SSF47413 4 64 1.54E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS07485 5f84c0199e237024d21aa2f3de002fa4 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 9 63 3.1E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS07485 5f84c0199e237024d21aa2f3de002fa4 68 Gene3D G3DSA:1.10.260.40 4 64 4.1E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02085 b92297597a10db7d10b460291174f167 480 PANTHER PTHR30614 30 480 8.5E-169 T 22-04-2016 LMES_RS02085 b92297597a10db7d10b460291174f167 480 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 479 3.2E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02085 b92297597a10db7d10b460291174f167 480 Gene3D G3DSA:3.40.190.10 211 253 5.2E-38 T 22-04-2016 LMES_RS02085 b92297597a10db7d10b460291174f167 480 Gene3D G3DSA:3.40.190.10 30 107 5.2E-38 T 22-04-2016 LMES_RS02085 b92297597a10db7d10b460291174f167 480 SMART SM00079 30 244 0.0043 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LMES_RS02085 b92297597a10db7d10b460291174f167 480 PANTHER PTHR30614:SF0 30 480 8.5E-169 T 22-04-2016 LMES_RS02085 b92297597a10db7d10b460291174f167 480 Gene3D G3DSA:1.10.3720.10 273 479 2.0E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02085 b92297597a10db7d10b460291174f167 480 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 251 3.8E-59 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS02085 b92297597a10db7d10b460291174f167 480 SUPERFAMILY SSF161098 276 464 1.7E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02085 b92297597a10db7d10b460291174f167 480 Gene3D G3DSA:3.40.190.10 108 204 5.4E-29 T 22-04-2016 LMES_RS02085 b92297597a10db7d10b460291174f167 480 SMART SM00062 30 253 9.5E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS02085 b92297597a10db7d10b460291174f167 480 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 276 373 7.2E-27 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS02085 b92297597a10db7d10b460291174f167 480 SUPERFAMILY SSF53850 2 252 1.01E-64 T 22-04-2016 LMES_RS06055 e6c81579998143da377ff780c4169b96 339 Pfam PF00288 GHMP kinases N terminal domain 99 168 2.5E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LMES_RS06055 e6c81579998143da377ff780c4169b96 339 SUPERFAMILY SSF54211 1 224 9.11E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS06055 e6c81579998143da377ff780c4169b96 339 Gene3D G3DSA:3.30.230.10 5 204 1.0E-57 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS06055 e6c81579998143da377ff780c4169b96 339 Gene3D G3DSA:3.30.70.890 209 336 2.5E-15 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS06055 e6c81579998143da377ff780c4169b96 339 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 6 333 1.8E-49 T 22-04-2016 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 LMES_RS06055 e6c81579998143da377ff780c4169b96 339 SUPERFAMILY SSF55060 207 332 9.11E-17 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS06055 e6c81579998143da377ff780c4169b96 339 Pfam PF08544 GHMP kinases C terminal 250 312 1.5E-4 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 1.0E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 102 1.0E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 Gene3D G3DSA:3.40.50.300 9 192 1.3E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 SUPERFAMILY SSF52540 11 208 2.92E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 Pfam PF07650 KH domain 210 287 2.8E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 PANTHER PTHR11649:SF3 7 303 5.8E-118 T 22-04-2016 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 Pfam PF01926 50S ribosome-binding GTPase 11 126 2.3E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 Hamap MF_00367 GTPase Era [era]. 6 298 37.654 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 281 5.3E-97 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 PANTHER PTHR11649 7 303 5.8E-118 T 22-04-2016 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 Gene3D G3DSA:3.30.300.20 193 294 1.5E-40 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 SUPERFAMILY SSF54814 184 299 3.07E-41 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LMES_RS03750 1b43c8d0b22bd6ad5e5e74e8730acca7 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 170 1.0E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS05070 35047a04487a69d4c17ac7f1dea72d3f 65 PANTHER PTHR34472:SF1 1 65 7.8E-13 T 22-04-2016 LMES_RS05070 35047a04487a69d4c17ac7f1dea72d3f 65 PANTHER PTHR34472 1 65 7.8E-13 T 22-04-2016 LMES_RS05070 35047a04487a69d4c17ac7f1dea72d3f 65 Pfam PF02597 ThiS family 3 65 1.1E-8 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 LMES_RS05070 35047a04487a69d4c17ac7f1dea72d3f 65 Gene3D G3DSA:3.10.20.30 1 65 1.6E-17 T 22-04-2016 IPR012675 Beta-grasp domain LMES_RS05070 35047a04487a69d4c17ac7f1dea72d3f 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 8.7E-14 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis LMES_RS05070 35047a04487a69d4c17ac7f1dea72d3f 65 SUPERFAMILY SSF54285 2 64 1.1E-13 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LMES_RS06130 93a268ca470d589fe8887972e6c03448 461 Pfam PF04932 O-Antigen ligase 234 348 1.2E-6 T 22-04-2016 IPR007016 O-antigen ligase-related LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 351 161.92 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 271 344 1.3E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Gene3D G3DSA:3.40.50.300 39 193 2.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 PANTHER PTHR13779 28 344 6.2E-170 T 22-04-2016 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Gene3D G3DSA:3.40.50.300 265 284 6.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 SUPERFAMILY SSF46785 275 345 2.63E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 43 344 6.0E-141 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Gene3D G3DSA:1.10.10.10 285 345 1.7E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 SUPERFAMILY SSF52540 38 270 1.69E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 26 253 2.2E-113 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 SMART SM00382 69 196 7.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 269 347 4.0E-27 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 Gene3D G3DSA:1.10.8.60 200 264 1.4E-30 T 22-04-2016 LMES_RS02940 be0abc838f29e0c0f60fc7ca195c2655 351 PANTHER PTHR13779:SF25 28 344 6.2E-170 T 22-04-2016 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 508 41.998 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 508 3.9E-199 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 PANTHER PTHR11692:SF2 1 508 3.0E-281 T 22-04-2016 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 SMART SM00851 13 128 2.6E-55 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 Gene3D G3DSA:3.40.140.20 356 497 4.1E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 SUPERFAMILY SSF53927 202 508 5.31E-116 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 Gene3D G3DSA:3.40.50.1380 2 184 5.7E-81 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 Gene3D G3DSA:3.40.140.20 236 350 3.0E-45 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 440 1.2E-112 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 SMART SM00798 133 441 3.1E-175 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 Pfam PF02142 MGS-like domain 13 127 2.8E-27 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 PIRSF PIRSF000414 1 508 1.2E-198 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 SUPERFAMILY SSF52335 2 190 3.01E-69 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain LMES_RS03495 3afadd31a2472ce01ab09a143ba0d33f 508 PANTHER PTHR11692 1 508 3.0E-281 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 Gene3D G3DSA:3.40.50.300 355 586 1.7E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 Pfam PF00005 ABC transporter 372 521 1.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 PANTHER PTHR24221 15 591 3.2E-209 T 22-04-2016 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 SUPERFAMILY SSF90123 25 334 2.09E-60 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 PANTHER PTHR24221:SF258 15 591 3.2E-209 T 22-04-2016 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 Gene3D G3DSA:1.20.1560.10 25 334 2.9E-61 T 22-04-2016 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 SUPERFAMILY SSF52540 351 591 1.04E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 Pfam PF00664 ABC transporter transmembrane region 39 310 1.7E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS08745 0f542cec420874f51cd53085d5f8b5fa 599 SMART SM00382 381 573 1.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 PANTHER PTHR33406 951 1190 1.4E-126 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 PANTHER PTHR33406 13 486 1.4E-126 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 SUPERFAMILY SSF82866 137 339 3.79E-34 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 569 594 1.4E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 511 533 1.7E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 513 540 1.1E-6 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 PANTHER PTHR33406 507 593 1.4E-126 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 Gene3D G3DSA:1.20.1640.10 135 341 2.5E-31 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 Gene3D G3DSA:1.20.1640.10 1013 1195 2.7E-20 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 SUPERFAMILY SSF82866 993 1194 1.44E-28 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 PANTHER PTHR33406:SF2 507 593 1.4E-126 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 PANTHER PTHR33406:SF2 13 486 1.4E-126 T 22-04-2016 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 Pfam PF03176 MMPL family 51 358 2.1E-55 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 Pfam PF03176 MMPL family 873 1190 4.0E-33 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LMES_RS03920 c3b6d97998844b279381165d191b05e5 1200 PANTHER PTHR33406:SF2 951 1190 1.4E-126 T 22-04-2016 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 Gene3D G3DSA:3.90.1170.10 23 135 1.6E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 6.4E-35 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 6.4E-35 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 6.4E-35 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 6.4E-35 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 SUPERFAMILY SSF54686 1 135 1.31E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 PANTHER PTHR12220 1 135 1.6E-63 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.6E-56 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.6E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LMES_RS00935 2879befadd3bfb32f8887b8067ebf8f0 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.18 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 PANTHER PTHR30349 1 298 8.8E-111 T 22-04-2016 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 298 1.6E-116 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 298 32.873 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 SUPERFAMILY SSF56349 9 291 1.82E-66 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 Pfam PF00589 Phage integrase family 113 284 3.0E-51 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 91 6.3E-18 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 Gene3D G3DSA:1.10.150.130 6 100 3.5E-26 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 Gene3D G3DSA:1.10.443.10 113 292 4.7E-61 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 PANTHER PTHR30349:SF5 1 298 8.8E-111 T 22-04-2016 LMES_RS05645 87703d689ad017e1accaad6a3c99bf90 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 55.186 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 670 713 1.7E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 893 165.838 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 Pfam PF02272 DHHA1 domain 818 886 9.7E-13 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PANTHER PTHR11777 1 893 0.0 T 22-04-2016 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 873 2.3E-285 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 5.2E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 5.2E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 5.2E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 5.2E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 231 244 5.2E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 SMART SM00863 670 713 3.9E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 SUPERFAMILY SSF55681 5 250 4.47E-85 T 22-04-2016 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 Gene3D G3DSA:3.30.930.10 4 245 4.5E-95 T 22-04-2016 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 SUPERFAMILY SSF55186 569 729 4.45E-48 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 Pfam PF01411 tRNA synthetases class II (A) 8 572 6.9E-186 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 PANTHER PTHR11777:SF9 1 893 0.0 T 22-04-2016 LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 SUPERFAMILY SSF50447 469 569 2.4E-11 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS02670 a4fd54913af89fa11eae2cdb21189335 893 SUPERFAMILY SSF101353 251 448 1.27E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 PANTHER PTHR10029 1 89 7.6E-20 T 22-04-2016 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 SUPERFAMILY SSF54975 2 89 1.4E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 Pfam PF00708 Acylphosphatase 1 89 3.1E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 PRINTS PR00112 Acylphosphatase signature 3 18 3.9E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 PRINTS PR00112 Acylphosphatase signature 24 49 3.9E-8 T 22-04-2016 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LMES_RS07730 a8d89302a2ff57b54c413bf0c752cac6 90 Gene3D G3DSA:3.30.70.100 1 89 1.6E-26 T 22-04-2016 LMES_RS06975 709cb2fd69d49ddb4df414b1011f45bf 114 Hamap MF_00245 UPF0122 protein . 3 103 17.069 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like LMES_RS06975 709cb2fd69d49ddb4df414b1011f45bf 114 Gene3D G3DSA:1.10.10.10 1 103 4.1E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS06975 709cb2fd69d49ddb4df414b1011f45bf 114 PANTHER PTHR40083 2 114 5.6E-22 T 22-04-2016 LMES_RS06975 709cb2fd69d49ddb4df414b1011f45bf 114 SUPERFAMILY SSF88659 2 103 8.78E-27 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS06975 709cb2fd69d49ddb4df414b1011f45bf 114 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 4 91 7.9E-27 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 SUPERFAMILY SSF52922 189 324 1.31E-38 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 SUPERFAMILY SSF52518 3 204 1.0E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 PANTHER PTHR11624 7 325 2.5E-159 T 22-04-2016 IPR033247 Transketolase family LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 Gene3D G3DSA:3.40.50.920 198 321 9.5E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 Pfam PF02779 Transketolase, pyrimidine binding domain 5 178 1.5E-37 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 Gene3D G3DSA:3.40.50.970 5 196 3.8E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 SMART SM00861 4 179 1.4E-57 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 Pfam PF02780 Transketolase, C-terminal domain 195 314 1.9E-35 T 22-04-2016 IPR033248 Transketolase, C-terminal domain LMES_RS03545 26611544d3ab99165870f9e50d7528a8 326 PANTHER PTHR11624:SF79 7 325 2.5E-159 T 22-04-2016 LMES_RS09440 ec2850c8f08ddb031ff8d244de5066d5 333 SUPERFAMILY SSF53448 6 218 6.94E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS09440 ec2850c8f08ddb031ff8d244de5066d5 333 Pfam PF00535 Glycosyl transferase family 2 8 131 8.2E-33 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS09440 ec2850c8f08ddb031ff8d244de5066d5 333 PANTHER PTHR22916 1 313 6.6E-51 T 22-04-2016 LMES_RS09440 ec2850c8f08ddb031ff8d244de5066d5 333 Gene3D G3DSA:3.90.550.10 2 200 7.9E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS09440 ec2850c8f08ddb031ff8d244de5066d5 333 PANTHER PTHR22916:SF24 1 313 6.6E-51 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 Pfam PF08544 GHMP kinases C terminal 196 266 5.4E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PANTHER PTHR20861 1 270 3.6E-72 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 SUPERFAMILY SSF54211 1 147 1.82E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 Gene3D G3DSA:3.30.230.10 1 145 2.5E-43 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 Gene3D G3DSA:3.30.70.890 152 270 1.2E-31 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 TIGRFAM TIGR00191 thrB: homoserine kinase 2 290 6.0E-68 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PRINTS PR00958 Homoserine kinase signature 159 176 2.2E-37 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PRINTS PR00958 Homoserine kinase signature 9 24 2.2E-37 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PRINTS PR00958 Homoserine kinase signature 86 101 2.2E-37 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PRINTS PR00958 Homoserine kinase signature 239 254 2.2E-37 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PRINTS PR00958 Homoserine kinase signature 120 133 2.2E-37 T 22-04-2016 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 Hamap MF_00384 Homoserine kinase [thrB]. 2 288 30.012 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 SUPERFAMILY SSF55060 155 269 1.76E-27 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 Pfam PF00288 GHMP kinases N terminal domain 72 133 1.4E-12 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PIRSF PIRSF000676 1 291 5.6E-79 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 79 90 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LMES_RS03775 aaaf805afb81a0bed9e89ceb03dc653a 292 PANTHER PTHR20861:SF1 1 270 3.6E-72 T 22-04-2016 LMES_RS00495 4d6b3239743b53ea106d0fae18229f2c 185 PANTHER PTHR23091:SF259 11 162 1.0E-21 T 22-04-2016 LMES_RS00495 4d6b3239743b53ea106d0fae18229f2c 185 Gene3D G3DSA:3.40.630.30 5 162 8.9E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS00495 4d6b3239743b53ea106d0fae18229f2c 185 Pfam PF13673 Acetyltransferase (GNAT) domain 28 159 3.3E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS00495 4d6b3239743b53ea106d0fae18229f2c 185 SUPERFAMILY SSF55729 5 158 9.37E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS00495 4d6b3239743b53ea106d0fae18229f2c 185 PANTHER PTHR23091 11 162 1.0E-21 T 22-04-2016 LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 SUPERFAMILY SSF52540 9 240 9.91E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 Pfam PF00005 ABC transporter 336 470 6.3E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 Pfam PF00005 ABC transporter 20 187 3.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 Gene3D G3DSA:3.40.50.300 5 283 6.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 Gene3D G3DSA:3.40.50.300 321 556 4.0E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 Pfam PF12848 ABC transporter 226 294 5.6E-10 T 22-04-2016 IPR032781 ABC-transporter extension domain LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 SMART SM00382 344 521 6.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 SMART SM00382 28 239 2.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 SUPERFAMILY SSF52540 314 517 6.78E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 Pfam PF16326 ABC transporter C-terminal domain 554 620 7.4E-18 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 PANTHER PTHR19211 5 564 3.7E-191 T 22-04-2016 LMES_RS05530 ce7e4d4b929cc425a08b2fd37f524bc6 625 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 Pfam PF13347 MFS/sugar transport protein 13 453 4.1E-88 T 22-04-2016 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 493 611 2.7E-41 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 SUPERFAMILY SSF103473 14 458 1.31E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 71 96 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 Gene3D G3DSA:1.20.1250.20 15 221 2.7E-7 T 22-04-2016 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 Gene3D G3DSA:1.20.1250.20 248 459 6.9E-13 T 22-04-2016 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 PANTHER PTHR11328 7 494 1.7E-46 T 22-04-2016 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 466 3.5E-144 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 492 613 2.7E-42 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 Gene3D G3DSA:2.70.70.10 485 638 1.3E-50 T 22-04-2016 LMES_RS04220 21fb674046265e9e0d59541d7ab5f6fd 640 SUPERFAMILY SSF51261 480 636 3.66E-46 T 22-04-2016 IPR011055 Duplicated hybrid motif LMES_RS02690 80821be8791534618688fbcaf39c61fb 492 PIRSF PIRSF006446 4 487 1.4E-139 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LMES_RS02690 80821be8791534618688fbcaf39c61fb 492 PANTHER PTHR30365:SF5 1 489 1.2E-166 T 22-04-2016 LMES_RS02690 80821be8791534618688fbcaf39c61fb 492 PANTHER PTHR30365 1 489 1.2E-166 T 22-04-2016 LMES_RS02690 80821be8791534618688fbcaf39c61fb 492 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 467 2.9E-150 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 SUPERFAMILY SSF53067 1 158 2.22E-55 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:3.90.640.10 201 286 1.5E-29 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:2.60.34.10 361 502 2.3E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:1.20.1270.10 503 579 2.2E-20 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Pfam PF00012 Hsp70 protein 4 580 4.5E-236 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 580 6.4E-277 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:3.30.30.30 39 99 1.3E-11 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:3.30.420.40 166 200 1.3E-35 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:3.30.420.40 290 332 1.3E-35 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PANTHER PTHR19375 2 614 0.0 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 SUPERFAMILY SSF53067 161 352 2.52E-65 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 SUPERFAMILY SSF100920 355 511 5.62E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PANTHER PTHR19375:SF173 2 614 0.0 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 113 133 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 336 356 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 359 378 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 173 183 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 440 456 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 PRINTS PR00301 70kDa heat shock protein signature 305 321 1.1E-77 T 22-04-2016 IPR013126 Heat shock protein 70 family LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 607 36.058 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 SUPERFAMILY SSF100934 478 581 1.2E-10 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:3.30.420.40 100 165 1.2E-57 T 22-04-2016 LMES_RS05855 1ba6a0d874ccc8ad011c4ca8de78feed 615 Gene3D G3DSA:3.30.420.40 3 38 1.2E-57 T 22-04-2016 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 172 2.3E-40 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 Gene3D G3DSA:3.30.1330.20 215 319 4.1E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 PANTHER PTHR30314:SF3 1 321 6.6E-176 T 22-04-2016 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 330 37.289 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 SMART SM00865 208 325 4.8E-54 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 PRINTS PR00423 Cell division protein FtsZ signature 99 119 3.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 PRINTS PR00423 Cell division protein FtsZ signature 190 212 3.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 PRINTS PR00423 Cell division protein FtsZ signature 213 234 3.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 PRINTS PR00423 Cell division protein FtsZ signature 127 148 3.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 SUPERFAMILY SSF52490 15 209 1.7E-66 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 Pfam PF12327 FtsZ family, C-terminal domain 223 317 1.1E-34 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 Gene3D G3DSA:3.40.50.1440 15 214 1.7E-90 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 PANTHER PTHR30314 1 321 6.6E-176 T 22-04-2016 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 327 1.0E-124 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 SUPERFAMILY SSF55307 205 318 1.37E-42 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal LMES_RS06595 42a33c6e1f981e3e5b8b2b307c0ea6b9 435 SMART SM00864 14 206 1.1E-106 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 Gene3D G3DSA:3.40.50.720 166 281 2.2E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 133 4.3E-31 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 PANTHER PTHR11695:SF429 12 337 6.7E-87 T 22-04-2016 LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 Pfam PF00107 Zinc-binding dehydrogenase 175 295 1.6E-12 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 PANTHER PTHR11695 12 337 6.7E-87 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 SUPERFAMILY SSF50129 1 172 1.17E-50 T 22-04-2016 IPR011032 GroES-like LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 Gene3D G3DSA:3.90.180.10 1 165 5.7E-51 T 22-04-2016 IPR011032 GroES-like LMES_RS02895 7ff59484b3026d2e8bd30a38bc562153 338 SUPERFAMILY SSF51735 141 302 4.16E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 PANTHER PTHR33164 7 145 2.3E-20 T 22-04-2016 LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 SUPERFAMILY SSF46785 4 132 5.29E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 Gene3D G3DSA:1.10.10.10 3 131 7.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 SMART SM00347 21 121 3.7E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04650 9c9a1930bda3fa5bbf5509bd02d389c5 147 Pfam PF12802 MarR family 26 84 1.2E-11 T 22-04-2016 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 SUPERFAMILY SSF51695 105 334 9.94E-48 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 110 334 2.0E-27 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 Gene3D G3DSA:2.20.120.10 32 62 3.5E-4 T 22-04-2016 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 Gene3D G3DSA:2.20.120.10 63 96 2.2E-5 T 22-04-2016 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 PANTHER PTHR23344 102 334 7.8E-44 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 SUPERFAMILY SSF69360 35 102 2.22E-8 T 22-04-2016 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 PANTHER PTHR23344:SF28 102 334 7.8E-44 T 22-04-2016 LMES_RS02955 6e3311a99e426b399d56d1af5c2f2e73 341 Gene3D G3DSA:3.20.20.190 104 334 2.7E-50 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LMES_RS07240 a49b81cfe58e1ec3cc4c1a9bb6243c9b 137 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 21.643 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 LMES_RS07240 a49b81cfe58e1ec3cc4c1a9bb6243c9b 137 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 1.3E-37 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 LMES_RS07240 a49b81cfe58e1ec3cc4c1a9bb6243c9b 137 PANTHER PTHR11078 1 135 2.5E-34 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 LMES_RS07240 a49b81cfe58e1ec3cc4c1a9bb6243c9b 137 Pfam PF01029 NusB family 8 132 5.8E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LMES_RS07240 a49b81cfe58e1ec3cc4c1a9bb6243c9b 137 Gene3D G3DSA:1.10.940.10 4 134 2.7E-38 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LMES_RS07240 a49b81cfe58e1ec3cc4c1a9bb6243c9b 137 SUPERFAMILY SSF48013 4 133 7.46E-34 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 44 1.1E-19 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 SUPERFAMILY SSF55653 57 149 4.84E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 PANTHER PTHR21368 1 147 2.6E-41 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 1.8E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 Gene3D G3DSA:3.10.430.100 60 149 4.5E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 SUPERFAMILY SSF55658 1 56 4.01E-16 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 Gene3D G3DSA:3.40.5.10 1 52 1.8E-20 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.4E-42 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08890 4b83b057ec1465431f3ce227d230648a 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 23.84 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 Gene3D G3DSA:3.40.50.970 355 558 1.6E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 Gene3D G3DSA:3.40.50.970 10 181 1.8E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 567 1.1E-210 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 PANTHER PTHR18968:SF116 1 569 2.7E-253 T 22-04-2016 LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 SUPERFAMILY SSF52518 373 567 1.14E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 SUPERFAMILY SSF52518 6 178 8.06E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 178 4.1E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 Gene3D G3DSA:3.40.50.1220 198 354 1.4E-51 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 335 4.1E-37 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 SUPERFAMILY SSF52467 195 361 6.18E-50 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 543 1.6E-46 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LMES_RS08855 1931ea0796870aaf6fbab66688785776 570 PANTHER PTHR18968 1 569 2.7E-253 T 22-04-2016 LMES_RS04095 34ea688ec172482df86fdcc48610c0da 109 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 105 2.3E-18 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD LMES_RS08785 48555d22437faa3149b59c663a96284b 159 PANTHER PTHR33603:SF1 1 159 1.4E-63 T 22-04-2016 LMES_RS08785 48555d22437faa3149b59c663a96284b 159 PANTHER PTHR33603 1 159 1.4E-63 T 22-04-2016 LMES_RS08785 48555d22437faa3149b59c663a96284b 159 SUPERFAMILY SSF75217 1 157 4.32E-59 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LMES_RS08785 48555d22437faa3149b59c663a96284b 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 9.0E-53 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS08785 48555d22437faa3149b59c663a96284b 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 2.4E-58 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS08785 48555d22437faa3149b59c663a96284b 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.122 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS08785 48555d22437faa3149b59c663a96284b 159 PIRSF PIRSF004505 1 159 1.4E-53 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS08785 48555d22437faa3149b59c663a96284b 159 Gene3D G3DSA:3.40.1280.10 1 159 6.4E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SUPERFAMILY SSF54106 98 141 3.79E-10 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Pfam PF01476 LysM domain 174 217 1.7E-13 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Pfam PF01476 LysM domain 32 71 8.8E-13 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Pfam PF01476 LysM domain 99 142 1.7E-13 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SUPERFAMILY SSF55797 263 363 1.43E-12 T 22-04-2016 IPR014044 CAP domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 PANTHER PTHR21666:SF206 28 219 9.1E-13 T 22-04-2016 LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SUPERFAMILY SSF54106 173 216 3.79E-10 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Gene3D G3DSA:3.40.33.10 261 349 5.2E-6 T 22-04-2016 IPR014044 CAP domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Gene3D G3DSA:3.10.350.10 32 71 3.3E-14 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 PANTHER PTHR21666 28 219 9.1E-13 T 22-04-2016 LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Pfam PF00188 Cysteine-rich secretory protein family 271 364 2.1E-7 T 22-04-2016 IPR014044 CAP domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SUPERFAMILY SSF54106 29 70 1.09E-8 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Gene3D G3DSA:3.10.350.10 174 216 1.2E-16 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 Gene3D G3DSA:3.10.350.10 99 141 1.0E-16 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SMART SM00257 98 142 1.2E-16 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SMART SM00257 29 73 2.4E-13 T 22-04-2016 IPR018392 LysM domain LMES_RS01525 be52b1ba4d942580b2424d44479c9493 372 SMART SM00257 173 217 6.4E-17 T 22-04-2016 IPR018392 LysM domain LMES_RS07590 8ddc1dcfa5529698df3a7bbff66c45ac 134 SUPERFAMILY SSF52821 14 129 1.28E-21 T 22-04-2016 IPR001763 Rhodanese-like domain LMES_RS07590 8ddc1dcfa5529698df3a7bbff66c45ac 134 Gene3D G3DSA:3.40.250.10 27 130 1.2E-16 T 22-04-2016 IPR001763 Rhodanese-like domain LMES_RS07590 8ddc1dcfa5529698df3a7bbff66c45ac 134 SMART SM00450 37 134 2.1E-13 T 22-04-2016 IPR001763 Rhodanese-like domain LMES_RS07590 8ddc1dcfa5529698df3a7bbff66c45ac 134 Pfam PF00581 Rhodanese-like domain 41 129 8.8E-12 T 22-04-2016 IPR001763 Rhodanese-like domain LMES_RS04215 925a192ad567580b22b4f859779b28a4 173 PANTHER PTHR40037:SF1 1 170 2.5E-13 T 22-04-2016 LMES_RS04215 925a192ad567580b22b4f859779b28a4 173 SUPERFAMILY SSF55144 7 129 1.12E-14 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase LMES_RS04215 925a192ad567580b22b4f859779b28a4 173 PANTHER PTHR40037 1 170 2.5E-13 T 22-04-2016 LMES_RS04215 925a192ad567580b22b4f859779b28a4 173 Gene3D G3DSA:3.90.1140.10 32 132 4.8E-8 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase LMES_RS04215 925a192ad567580b22b4f859779b28a4 173 Pfam PF13563 2'-5' RNA ligase superfamily 13 154 1.2E-28 T 22-04-2016 LMES_RS03140 64dfe089eac5c455e727ddc023b9cdab 132 PANTHER PTHR35794 95 126 3.4E-22 T 22-04-2016 LMES_RS03140 64dfe089eac5c455e727ddc023b9cdab 132 PANTHER PTHR35794 2 75 3.4E-22 T 22-04-2016 LMES_RS03140 64dfe089eac5c455e727ddc023b9cdab 132 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 7 41 9.9E-12 T 22-04-2016 IPR019933 DivIVA domain LMES_RS03140 64dfe089eac5c455e727ddc023b9cdab 132 Pfam PF05103 DivIVA protein 6 109 6.4E-18 T 22-04-2016 IPR007793 DivIVA family LMES_RS03140 64dfe089eac5c455e727ddc023b9cdab 132 PANTHER PTHR35794:SF1 95 126 3.4E-22 T 22-04-2016 LMES_RS03140 64dfe089eac5c455e727ddc023b9cdab 132 PANTHER PTHR35794:SF1 2 75 3.4E-22 T 22-04-2016 LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 Pfam PF00106 short chain dehydrogenase 5 184 3.1E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 Gene3D G3DSA:3.40.50.720 4 272 1.9E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PANTHER PTHR24322:SF397 147 178 4.9E-56 T 22-04-2016 LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PANTHER PTHR24322:SF397 9 131 4.9E-56 T 22-04-2016 LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 SUPERFAMILY SSF51735 3 269 2.63E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PANTHER PTHR24322 147 178 4.9E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PANTHER PTHR24322 9 131 4.9E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.3E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04385 14a3ba8b318cecd0ceb2ebc0ec0e0147 273 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 219 36.716 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 212 7.1E-71 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 Pfam PF03167 Uracil DNA glycosylase superfamily 54 207 6.7E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 SUPERFAMILY SSF52141 4 218 1.36E-80 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 SMART SM00986 50 208 6.1E-33 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 PANTHER PTHR11264 7 218 1.2E-100 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 Gene3D G3DSA:3.40.470.10 4 218 1.6E-85 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 SMART SM00987 50 208 6.1E-33 T 22-04-2016 LMES_RS06470 922316793ff67804023e8cc1e03d3ffc 220 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 LMES_RS00525 f0125ab8fbeec0c8d2abb9f436ba32a2 248 Gene3D G3DSA:3.50.30.50 15 246 1.2E-54 T 22-04-2016 LMES_RS00525 f0125ab8fbeec0c8d2abb9f436ba32a2 248 PANTHER PTHR31118 16 246 1.7E-60 T 22-04-2016 LMES_RS00525 f0125ab8fbeec0c8d2abb9f436ba32a2 248 SUPERFAMILY SSF102198 15 244 1.96E-52 T 22-04-2016 LMES_RS00525 f0125ab8fbeec0c8d2abb9f436ba32a2 248 PANTHER PTHR31118:SF9 16 246 1.7E-60 T 22-04-2016 LMES_RS00525 f0125ab8fbeec0c8d2abb9f436ba32a2 248 Pfam PF04199 Putative cyclase 18 184 2.4E-31 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 Gene3D G3DSA:2.40.380.10 9 176 1.9E-47 T 22-04-2016 IPR007295 Domain of unknown function DUF402 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 PANTHER PTHR39159:SF1 5 182 5.8E-65 T 22-04-2016 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 Hamap MF_01568 UPF0374 protein . 7 181 47.255 T 22-04-2016 IPR016882 Uncharacterised protein family UPF0374 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 Pfam PF04167 Protein of unknown function (DUF402) 66 130 4.0E-16 T 22-04-2016 IPR007295 Domain of unknown function DUF402 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 PIRSF PIRSF028345 7 186 3.0E-74 T 22-04-2016 IPR016882 Uncharacterised protein family UPF0374 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 SUPERFAMILY SSF159234 12 176 8.89E-32 T 22-04-2016 LMES_RS03230 dbe3b217492e414086f29c47bdb84cd9 189 PANTHER PTHR39159 5 182 5.8E-65 T 22-04-2016 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 8 303 4.0E-138 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 PIRSF PIRSF001478 1 474 4.9E-222 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 PANTHER PTHR38464:SF1 2 473 7.0E-154 T 22-04-2016 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 SUPERFAMILY SSF53743 1 326 1.12E-118 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 Pfam PF02610 L-arabinose isomerase 5 357 1.1E-163 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 PANTHER PTHR38464 2 473 7.0E-154 T 22-04-2016 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 Hamap MF_00519 L-arabinose isomerase [araA]. 1 474 57.144 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 SUPERFAMILY SSF50443 327 474 2.2E-55 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal LMES_RS04120 83aa4c17cd07c03bb64d3645e19246ee 474 Pfam PF11762 L-arabinose isomerase C-terminal domain 360 473 7.4E-43 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 PANTHER PTHR10381 39 171 1.6E-30 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 PRINTS PR00127 Clp protease catalytic subunit P signature 42 62 7.0E-7 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 PRINTS PR00127 Clp protease catalytic subunit P signature 149 168 7.0E-7 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 PRINTS PR00127 Clp protease catalytic subunit P signature 73 90 7.0E-7 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 Gene3D G3DSA:3.90.226.10 39 176 1.3E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 PANTHER PTHR10381:SF23 39 171 1.6E-30 T 22-04-2016 LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 Pfam PF00574 Clp protease 40 172 4.9E-29 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LMES_RS07370 b8a5e8b6b19373e058f797c6c30ffbe1 229 SUPERFAMILY SSF52096 38 175 2.7E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 Gene3D G3DSA:3.40.190.10 224 266 1.3E-39 T 22-04-2016 LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 Gene3D G3DSA:3.40.190.10 43 120 1.3E-39 T 22-04-2016 LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 PANTHER PTHR18966 42 269 1.4E-42 T 22-04-2016 LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 266 1.4E-60 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 SMART SM00062 46 268 6.0E-59 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 SUPERFAMILY SSF53850 31 268 1.52E-63 T 22-04-2016 LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 SMART SM00079 46 267 4.0E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LMES_RS05455 1ce6022db887d53d1723c7be746b55d2 278 Gene3D G3DSA:3.40.190.10 121 221 1.3E-23 T 22-04-2016 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 PANTHER PTHR11649:SF37 1 147 4.8E-230 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 PANTHER PTHR11649:SF37 263 675 4.8E-230 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 636 8.4E-164 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 Pfam PF07670 Nucleoside recognition 354 448 8.8E-11 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 Pfam PF07670 Nucleoside recognition 515 639 1.8E-28 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 SUPERFAMILY SSF52540 6 164 2.75E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 PANTHER PTHR11649 1 147 4.8E-230 T 22-04-2016 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 PANTHER PTHR11649 263 675 4.8E-230 T 22-04-2016 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 Gene3D G3DSA:3.40.50.300 3 172 2.6E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 Pfam PF02421 Ferrous iron transport protein B 6 160 3.3E-63 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 Pfam PF07664 Ferrous iron transport protein B C terminus 460 510 2.2E-15 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 9.9E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS01330 da37b04ead7b1619847221486ce06f05 704 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 9.9E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS06495 1aa76d0652184024b1bcce665a930926 278 PANTHER PTHR37308 3 276 2.7E-49 T 22-04-2016 LMES_RS06495 1aa76d0652184024b1bcce665a930926 278 Pfam PF04018 Domain of unknown function (DUF368) 24 237 8.2E-32 T 22-04-2016 IPR007163 Protein of unknown function DUF368 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 PANTHER PTHR24221:SF215 11 549 9.3E-214 T 22-04-2016 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 Gene3D G3DSA:1.20.1560.10 16 318 4.8E-30 T 22-04-2016 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 PANTHER PTHR24221 11 549 9.3E-214 T 22-04-2016 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 SUPERFAMILY SSF52540 327 558 7.17E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 SMART SM00382 357 551 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 SUPERFAMILY SSF90123 473 481 1.1E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 SUPERFAMILY SSF90123 14 297 1.1E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 16 539 1.4E-159 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 Gene3D G3DSA:3.40.50.300 334 567 3.7E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 Pfam PF00005 ABC transporter 348 498 5.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02700 0dd2f843be0d89b8a45c0d9754ff609c 575 Pfam PF00664 ABC transporter transmembrane region 17 264 5.5E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS07600 de48911c88a4aabdcbd52dfefc819eaf 144 PANTHER PTHR30041 1 134 5.5E-62 T 22-04-2016 LMES_RS07600 de48911c88a4aabdcbd52dfefc819eaf 144 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 9.0E-33 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR LMES_RS07600 de48911c88a4aabdcbd52dfefc819eaf 144 PANTHER PTHR30041:SF5 1 134 5.5E-62 T 22-04-2016 LMES_RS07600 de48911c88a4aabdcbd52dfefc819eaf 144 Pfam PF03960 ArsC family 18 113 3.0E-21 T 22-04-2016 IPR006660 Arsenate reductase-like LMES_RS07600 de48911c88a4aabdcbd52dfefc819eaf 144 SUPERFAMILY SSF52833 1 126 1.68E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS07600 de48911c88a4aabdcbd52dfefc819eaf 144 Gene3D G3DSA:3.40.30.10 1 124 5.9E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS00360 f69e9db1d805e2f73ca2cfa8c8947df5 373 PANTHER PTHR32196 10 358 4.3E-89 T 22-04-2016 LMES_RS00360 f69e9db1d805e2f73ca2cfa8c8947df5 373 PANTHER PTHR32196:SF30 10 358 4.3E-89 T 22-04-2016 LMES_RS00360 f69e9db1d805e2f73ca2cfa8c8947df5 373 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 334 1.1E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PANTHER PTHR11071 141 192 2.0E-90 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PANTHER PTHR11071 16 117 2.0E-90 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 Gene3D G3DSA:2.40.100.10 7 192 6.6E-70 T 22-04-2016 IPR029000 Cyclophilin-like domain LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 30 45 2.0E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 2.0E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 56 68 2.0E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 2.0E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 SUPERFAMILY SSF50891 15 117 1.46E-61 T 22-04-2016 IPR029000 Cyclophilin-like domain LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 SUPERFAMILY SSF50891 144 192 1.46E-61 T 22-04-2016 IPR029000 Cyclophilin-like domain LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PANTHER PTHR11071:SF282 141 192 2.0E-90 T 22-04-2016 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 PANTHER PTHR11071:SF282 16 117 2.0E-90 T 22-04-2016 LMES_RS07635 05e8416aff85e7ae447635a37bf4c090 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 191 8.0E-50 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 Gene3D G3DSA:3.40.50.620 2 228 2.8E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 411 4.4E-118 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 156 171 1.5E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.5E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 177 199 1.5E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 212 224 1.5E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 414 41.523 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 Gene3D G3DSA:1.10.240.10 229 312 3.5E-43 T 22-04-2016 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 PANTHER PTHR11766 1 411 4.8E-195 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 SUPERFAMILY SSF52374 1 319 4.97E-103 T 22-04-2016 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 Gene3D G3DSA:3.10.290.10 313 413 4.6E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 SUPERFAMILY SSF55174 317 411 3.01E-20 T 22-04-2016 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 PANTHER PTHR11766:SF3 1 411 4.8E-195 T 22-04-2016 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS09270 5a233636d4803e9a64ea108ebf371f7e 415 Pfam PF00579 tRNA synthetases class I (W and Y) 29 319 1.6E-81 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Gene3D G3DSA:4.10.860.10 622 665 1.3E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 SUPERFAMILY SSF52540 9 421 2.17E-135 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 664 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Gene3D G3DSA:3.40.50.300 283 343 5.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Gene3D G3DSA:3.40.50.300 393 410 5.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Gene3D G3DSA:3.40.50.300 11 94 5.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 SUPERFAMILY SSF46600 624 665 6.67E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 PANTHER PTHR24029 4 664 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 SMART SM00487 14 432 7.1E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 SUPERFAMILY SSF52540 476 601 5.45E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 SUPERFAMILY SSF52540 40 85 5.45E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Pfam PF00271 Helicase conserved C-terminal domain 440 551 1.4E-21 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Gene3D G3DSA:3.40.50.300 425 586 3.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Gene3D G3DSA:3.30.2060.10 165 238 9.8E-12 T 22-04-2016 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Pfam PF12344 Ultra-violet resistance protein B 558 600 9.4E-23 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Pfam PF02151 UvrB/uvrC motif 634 664 3.1E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 SMART SM00490 466 552 1.4E-23 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Pfam PF04851 Type III restriction enzyme, res subunit 16 116 2.4E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LMES_RS01855 455889d7ecf5680b4517c7f882ebb20a 669 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 666 43.033 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 162 3.2E-50 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 3.8E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.8E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 3.8E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 359 381 3.8E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.8E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 3.8E-85 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 Gene3D G3DSA:1.10.1040.10 182 436 1.1E-108 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PANTHER PTHR11811:SF25 1 475 9.2E-276 T 22-04-2016 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 256 268 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PIRSF PIRSF000109 1 475 6.8E-225 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 SUPERFAMILY SSF51735 4 167 1.36E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 Gene3D G3DSA:1.20.5.320 439 474 1.0E-19 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 PANTHER PTHR11811 1 475 9.2E-276 T 22-04-2016 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 472 3.6E-211 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 Gene3D G3DSA:3.40.50.720 1 181 5.5E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 471 1.0E-122 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 SUPERFAMILY SSF48179 178 473 1.13E-121 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS04460 d52f3ac65816541c815b24cd1ad94686 475 SMART SM01350 180 472 1.3E-204 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 365 2.1E-149 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 Gene3D G3DSA:3.30.160.20 228 306 1.3E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 SUPERFAMILY SSF75620 29 366 2.22E-124 T 22-04-2016 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 SMART SM00937 84 195 1.3E-49 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 Pfam PF00472 RF-1 domain 229 338 2.2E-35 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 PANTHER PTHR11075:SF6 1 372 1.6E-147 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 245 261 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 PANTHER PTHR11075 1 372 1.6E-147 T 22-04-2016 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 Pfam PF03462 PCRF domain 30 220 2.6E-56 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 Gene3D G3DSA:1.20.58.410 2 115 6.8E-24 T 22-04-2016 LMES_RS00845 7330eb378eb07484ffacf6d14b300685 372 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 366 40.016 T 22-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 PANTHER PTHR33280 1 86 2.7E-29 T 22-04-2016 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.37 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 PRINTS PR01249 Ribosomal protein L31 signature 44 59 9.2E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.2E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 PRINTS PR01249 Ribosomal protein L31 signature 59 77 9.2E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 SUPERFAMILY SSF143800 1 81 1.84E-21 T 22-04-2016 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 PANTHER PTHR33280:SF2 1 86 2.7E-29 T 22-04-2016 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.6E-18 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02145 a1a1d4b647ebc9d9352fd9c3e59d18ed 88 Pfam PF01197 Ribosomal protein L31 1 78 6.2E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF04565 RNA polymerase Rpb2, domain 3 475 543 4.2E-27 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:2.40.50.150 784 916 3.5E-56 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:3.90.1110.10 382 406 7.9E-59 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:3.90.1110.10 142 301 7.9E-59 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 PANTHER PTHR20856 3 292 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 PANTHER PTHR20856 385 1149 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:2.40.50.100 679 749 5.0E-27 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:3.90.1100.10 623 677 2.5E-146 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:3.90.1100.10 21 140 2.5E-146 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:3.90.1100.10 407 553 2.5E-146 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 SUPERFAMILY SSF64484 13 294 0.0 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 SUPERFAMILY SSF64484 373 1156 0.0 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 221 892 2.4E-290 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF00562 RNA polymerase Rpb2, domain 6 681 1067 5.4E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 PANTHER PTHR20856:SF20 3 292 0.0 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 ProSitePatterns PS01166 RNA polymerases beta chain signature. 920 932 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:2.40.270.10 917 1045 1.1E-74 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:2.40.270.10 750 777 1.1E-74 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1145 12.227 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 PANTHER PTHR20856:SF20 385 1149 0.0 T 22-04-2016 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF04563 RNA polymerase beta subunit 28 460 1.9E-26 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF04561 RNA polymerase Rpb2, domain 2 377 416 2.4E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 294 1.0E-18 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF04560 RNA polymerase Rpb2, domain 7 1069 1143 2.1E-25 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Pfam PF10385 RNA polymerase beta subunit external 1 domain 553 620 6.5E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS08200 6ad6a50067eae23acdd31b9c57987836 1202 Gene3D G3DSA:2.30.150.10 554 620 2.3E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 PANTHER PTHR26402:SF577 1 115 3.6E-12 T 22-04-2016 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 Pfam PF00072 Response regulator receiver domain 3 108 3.1E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 SMART SM00850 138 232 3.5E-10 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 Gene3D G3DSA:2.40.50.40 130 196 3.4E-9 T 22-04-2016 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 PANTHER PTHR26402 1 115 3.6E-12 T 22-04-2016 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 Pfam PF04397 LytTr DNA-binding domain 141 228 1.6E-10 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 Gene3D G3DSA:3.40.50.2300 2 115 2.0E-9 T 22-04-2016 LMES_RS00040 3a99449ddb6e537acd351a9f12e40d97 237 SUPERFAMILY SSF52172 2 114 1.99E-9 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS07500 43363d0aa34dbf12e3db84d3ca403a03 80 Gene3D G3DSA:1.10.10.10 24 74 6.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07500 43363d0aa34dbf12e3db84d3ca403a03 80 SUPERFAMILY SSF46955 24 74 7.51E-5 T 22-04-2016 IPR009061 Putative DNA-binding domain LMES_RS04565 ae09409bc08170be162e7eb6f30dfd77 119 PANTHER PTHR33204 1 118 2.0E-40 T 22-04-2016 LMES_RS04565 ae09409bc08170be162e7eb6f30dfd77 119 Gene3D G3DSA:1.10.10.10 8 114 9.2E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04565 ae09409bc08170be162e7eb6f30dfd77 119 Pfam PF01638 HxlR-like helix-turn-helix 20 108 1.4E-31 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type LMES_RS04565 ae09409bc08170be162e7eb6f30dfd77 119 SUPERFAMILY SSF46785 10 114 2.61E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 Gene3D G3DSA:3.40.50.2300 2 123 1.2E-43 T 22-04-2016 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.3E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 PANTHER PTHR26402 2 228 1.8E-105 T 22-04-2016 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 Gene3D G3DSA:1.10.10.10 129 229 4.5E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 SMART SM00448 2 113 1.0E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 SMART SM00862 152 228 3.0E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 SUPERFAMILY SSF52172 1 126 4.27E-43 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 PANTHER PTHR26402:SF614 2 228 1.8E-105 T 22-04-2016 LMES_RS02810 8e784a222b6309071f7aa6946318961f 230 SUPERFAMILY SSF46894 129 228 1.08E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 PANTHER PTHR24220 4 238 3.0E-83 T 22-04-2016 LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 SMART SM00382 32 222 4.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 SUPERFAMILY SSF52540 3 235 9.61E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 Gene3D G3DSA:3.40.50.300 2 238 6.6E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 Pfam PF00005 ABC transporter 23 173 1.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01050 d2aee56a596f5ecb4a7fc084079c733c 285 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 279 1.3E-105 T 22-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:1.20.1580.10 699 825 4.0E-55 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:1.20.1580.10 94 131 7.8E-47 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:1.20.1580.10 414 484 7.8E-47 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:1.20.1580.10 257 290 7.8E-47 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 929 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 PANTHER PTHR32282 2 948 0.0 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 PANTHER PTHR32282:SF2 2 948 0.0 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 SUPERFAMILY SSF52540 437 576 1.4E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 SUPERFAMILY SSF52540 6 207 1.4E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:1.10.8.280 292 413 8.7E-44 T 22-04-2016 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:3.30.1490.20 203 243 3.1E-18 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:3.30.1490.20 132 155 3.1E-18 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 SUPERFAMILY SSF52540 620 918 4.28E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 945 21.958 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 SMART SM00382 25 571 22.0 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 SMART SM00382 638 927 9.9E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 ProSitePatterns PS00211 ABC transporters family signature. 835 849 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:3.40.50.300 3 91 8.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:3.40.50.300 485 602 8.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:3.40.50.300 826 947 7.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Gene3D G3DSA:3.40.50.300 612 691 7.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01860 710ce0703f82c887c18b175c166d3eb2 952 Pfam PF00005 ABC transporter 629 865 1.2E-11 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PIRSF PIRSF002401 1 381 5.5E-134 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 Pfam PF01018 GTP1/OBG 3 158 1.3E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 373 437 5.9E-21 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PANTHER PTHR11702:SF3 424 436 2.8E-153 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PANTHER PTHR11702:SF3 1 344 2.8E-153 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 SUPERFAMILY SSF102741 365 436 5.36E-19 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 334 1.9E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 SUPERFAMILY SSF52540 151 347 1.02E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PANTHER PTHR11702 424 436 2.8E-153 T 22-04-2016 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PANTHER PTHR11702 1 344 2.8E-153 T 22-04-2016 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 Pfam PF09269 Domain of unknown function (DUF1967) 366 437 2.2E-22 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 Gene3D G3DSA:2.70.210.12 3 156 9.0E-54 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 SUPERFAMILY SSF82051 3 158 1.09E-52 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.1E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.1E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.1E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.1E-33 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 Hamap MF_01454 GTPase Obg [obg]. 2 336 45.947 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.0E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS02490 1a0fc3b0f55a8b78307b41f5f5490259 439 Gene3D G3DSA:3.40.50.300 160 340 1.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1437 387.422 T 22-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044:SF26 823 908 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044:SF26 24 548 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044:SF26 926 1068 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044:SF26 1106 1411 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 SUPERFAMILY SSF50249 230 311 1.35E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Gene3D G3DSA:3.20.20.140 329 417 7.0E-45 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Gene3D G3DSA:3.20.20.140 628 793 7.0E-45 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Gene3D G3DSA:3.30.420.10 418 585 4.4E-53 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Pfam PF11490 DNA polymerase III polC-type N-terminus II 93 203 2.7E-16 T 22-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 SUPERFAMILY SSF53098 419 873 1.6E-93 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 SMART SM00481 331 398 2.3E-21 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044 823 908 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044 24 548 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044 926 1068 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 PANTHER PTHR23044 1106 1411 0.0 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Gene3D G3DSA:2.40.50.140 231 319 6.9E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 822 1241 2.1E-84 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Gene3D G3DSA:1.10.150.280 1373 1418 3.5E-10 T 22-04-2016 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 226 1435 0.0 T 22-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 413 633 1.7E-37 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Pfam PF02811 PHP domain 332 692 3.7E-42 T 22-04-2016 IPR004013 PHP domain GO:0003824 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Pfam PF14579 Helix-hairpin-helix motif 1348 1426 6.2E-6 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 SMART SM00479 418 584 2.5E-38 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Pfam PF00929 Exonuclease 420 571 3.9E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LMES_RS03310 4889553e279bd38acaa8bbbe3b93e573 1437 Pfam PF14480 DNA polymerase III polC-type N-terminus I 9 79 2.9E-17 T 22-04-2016 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 Gene3D G3DSA:3.30.1940.10 20 89 1.3E-17 T 22-04-2016 IPR027855 Domain of unknown function DUF4479 LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 Gene3D G3DSA:2.40.50.140 92 199 3.3E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 Pfam PF01588 Putative tRNA binding domain 95 192 7.2E-13 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 Pfam PF14794 Domain of unknown function (DUF4479) 20 90 3.1E-19 T 22-04-2016 IPR027855 Domain of unknown function DUF4479 LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 SUPERFAMILY SSF50249 93 200 9.55E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 PANTHER PTHR10947:SF0 86 171 1.1E-13 T 22-04-2016 LMES_RS03400 377b7ee6368163a2db2665e75b7adf29 218 PANTHER PTHR10947 86 171 1.1E-13 T 22-04-2016 LMES_RS03590 1aee920ed5a4d28d7b599004bdd63e5f 295 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 279 6.6E-17 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 LMES_RS03590 1aee920ed5a4d28d7b599004bdd63e5f 295 PANTHER PTHR33545 1 288 1.4E-107 T 22-04-2016 LMES_RS03590 1aee920ed5a4d28d7b599004bdd63e5f 295 PIRSF PIRSF006483 1 285 5.4E-81 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS03590 1aee920ed5a4d28d7b599004bdd63e5f 295 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 220 2.9E-62 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS03590 1aee920ed5a4d28d7b599004bdd63e5f 295 PANTHER PTHR33545:SF7 1 288 1.4E-107 T 22-04-2016 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 PANTHER PTHR10772:SF0 2 94 1.2E-34 T 22-04-2016 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 3.2E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 PANTHER PTHR10772 2 94 1.2E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 SUPERFAMILY SSF50129 1 94 1.05E-29 T 22-04-2016 IPR011032 GroES-like LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 Gene3D G3DSA:2.30.33.40 2 94 4.3E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 23.293 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 SMART SM00883 1 93 2.6E-45 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 PRINTS PR00297 10kDa chaperonin signature 80 93 3.5E-26 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 PRINTS PR00297 10kDa chaperonin signature 59 71 3.5E-26 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 PRINTS PR00297 10kDa chaperonin signature 2 17 3.5E-26 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS07895 e8c60b9f44edbb01844eed793657a9b4 94 PRINTS PR00297 10kDa chaperonin signature 24 45 3.5E-26 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LMES_RS05410 c80925e766907233fc406ecb463ae14f 246 PANTHER PTHR24220 4 223 4.4E-68 T 22-04-2016 LMES_RS05410 c80925e766907233fc406ecb463ae14f 246 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS05410 c80925e766907233fc406ecb463ae14f 246 SUPERFAMILY SSF52540 3 224 5.43E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05410 c80925e766907233fc406ecb463ae14f 246 Pfam PF00005 ABC transporter 18 161 3.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS05410 c80925e766907233fc406ecb463ae14f 246 Gene3D G3DSA:3.40.50.300 3 225 3.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05410 c80925e766907233fc406ecb463ae14f 246 SMART SM00382 27 212 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 SMART SM00829 15 345 3.9E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 PANTHER PTHR11695 15 347 6.8E-113 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 SUPERFAMILY SSF50129 2 180 9.89E-42 T 22-04-2016 IPR011032 GroES-like LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 Gene3D G3DSA:3.40.50.720 179 295 2.9E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 SUPERFAMILY SSF51735 148 316 5.09E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 7.0E-27 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 PANTHER PTHR11695:SF498 15 347 6.8E-113 T 22-04-2016 LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 Pfam PF00107 Zinc-binding dehydrogenase 185 309 6.8E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LMES_RS08655 e030bec97a8f2d237e56e65814e01807 350 Gene3D G3DSA:3.90.180.10 1 178 6.8E-53 T 22-04-2016 IPR011032 GroES-like LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 Pfam PF12836 Helix-hairpin-helix motif 148 210 1.4E-23 T 22-04-2016 LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 SMART SM00278 159 178 0.45 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 SMART SM00278 189 208 1.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 SUPERFAMILY SSF47781 133 211 1.08E-30 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 150 211 2.4E-24 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 Gene3D G3DSA:3.10.560.10 70 118 7.8E-10 T 22-04-2016 LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 Pfam PF10531 SLBB domain 70 125 9.4E-15 T 22-04-2016 IPR019554 Soluble ligand binding domain LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 Gene3D G3DSA:1.10.150.280 119 211 2.2E-22 T 22-04-2016 LMES_RS07105 c5e90bf3f5c2040b92c2d4a7447b6b03 211 PANTHER PTHR21180 1 211 7.8E-41 T 22-04-2016 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Gene3D G3DSA:1.10.1780.10 1 147 8.1E-34 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 PANTHER PTHR11638 1 825 0.0 T 22-04-2016 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 626 644 5.8E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 552 570 5.8E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 673 5.8E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 615 5.8E-40 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 SMART SM01086 725 814 2.8E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 PANTHER PTHR11638:SF18 1 825 0.0 T 22-04-2016 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 315 3.6E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 99 145 1.7E-5 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 1.2E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Gene3D G3DSA:3.40.50.300 169 349 1.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 SUPERFAMILY SSF52540 167 469 3.01E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Gene3D G3DSA:1.10.8.60 737 821 2.1E-28 T 22-04-2016 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Pfam PF07724 AAA domain (Cdc48 subfamily) 547 718 1.1E-50 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 SUPERFAMILY SSF52540 497 800 3.87E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 SMART SM00382 206 351 4.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 SMART SM00382 548 688 3.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Gene3D G3DSA:1.10.8.60 351 434 4.0E-32 T 22-04-2016 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Pfam PF02151 UvrB/uvrC motif 428 457 1.3E-5 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 725 804 4.3E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 582 600 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 SUPERFAMILY SSF81923 3 149 5.49E-24 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Gene3D G3DSA:3.40.50.300 502 672 7.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00850 ec94ba72ede8ee76791e89d9bd04e9c5 826 Gene3D G3DSA:3.40.50.300 706 736 7.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09325 db568e2106051c4dc70191a940637f45 262 Gene3D G3DSA:3.90.850.10 5 261 2.8E-44 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LMES_RS09325 db568e2106051c4dc70191a940637f45 262 PANTHER PTHR30143 1 261 2.8E-32 T 22-04-2016 LMES_RS09325 db568e2106051c4dc70191a940637f45 262 SUPERFAMILY SSF56529 6 261 3.82E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 PANTHER PTHR30446:SF0 1 201 2.0E-99 T 22-04-2016 LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 Pfam PF13662 Toprim domain 82 174 1.5E-21 T 22-04-2016 IPR006171 Toprim domain LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 SUPERFAMILY SSF111304 1 201 1.57E-69 T 22-04-2016 IPR023627 Recombination protein RecR LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 SMART SM00493 82 168 2.0E-12 T 22-04-2016 IPR006171 Toprim domain LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 Pfam PF02132 RecR protein 39 80 3.0E-14 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 PANTHER PTHR30446 1 201 2.0E-99 T 22-04-2016 LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 TIGRFAM TIGR00615 recR: recombination protein RecR 1 199 4.9E-74 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 ProSitePatterns PS01300 RecR protein signature. 57 80 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 LMES_RS01285 38d0e7d0a7ed71419b2e65c4e856dd61 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 201 99.383 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 PANTHER PTHR10108 1 150 1.8E-26 T 22-04-2016 LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 PANTHER PTHR10108 184 249 1.8E-26 T 22-04-2016 LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 PANTHER PTHR10108:SF872 1 150 1.8E-26 T 22-04-2016 LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 PANTHER PTHR10108:SF872 184 249 1.8E-26 T 22-04-2016 LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 SUPERFAMILY SSF53335 7 250 1.37E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 Pfam PF13649 Methyltransferase domain 41 137 1.9E-14 T 22-04-2016 LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 Gene3D G3DSA:3.40.50.150 3 164 9.5E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07755 2dcfccc16bd8676d7b15055869442ff3 250 Gene3D G3DSA:3.40.50.150 203 229 9.5E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 SMART SM00434 8 461 2.1E-231 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 SUPERFAMILY SSF101904 498 803 7.19E-66 T 22-04-2016 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 468 5.7E-143 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 607 647 0.62 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 547 583 8.0E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 656 700 1.4E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 PANTHER PTHR10169 2 810 0.0 T 22-04-2016 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 PANTHER PTHR10169:SF47 2 810 0.0 T 22-04-2016 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Gene3D G3DSA:3.30.1360.40 233 329 1.8E-30 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 SUPERFAMILY SSF56719 28 483 2.88E-159 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 5 744 1.8E-291 T 22-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Gene3D G3DSA:3.90.199.10 330 395 8.1E-108 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Gene3D G3DSA:3.90.199.10 27 232 8.1E-108 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 4 806 33.006 T 22-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS05935 a869944fda0c11c32a6339f386ecc9d6 812 Gene3D G3DSA:2.120.10.90 498 799 4.6E-59 T 22-04-2016 LMES_RS06785 e57bd91b9ae171556b4ab407344e75d4 401 Gene3D G3DSA:3.40.50.300 12 204 1.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06785 e57bd91b9ae171556b4ab407344e75d4 401 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 40 388 8.5E-109 T 22-04-2016 IPR018647 Domain of unknown function DUF2075 LMES_RS06785 e57bd91b9ae171556b4ab407344e75d4 401 SUPERFAMILY SSF52540 14 171 4.03E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05800 e11687cc7f6c39eb31e2a90da3360d2e 176 PANTHER PTHR23091:SF247 1 174 1.4E-26 T 22-04-2016 LMES_RS05800 e11687cc7f6c39eb31e2a90da3360d2e 176 SUPERFAMILY SSF55729 1 161 1.83E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS05800 e11687cc7f6c39eb31e2a90da3360d2e 176 Gene3D G3DSA:3.40.630.30 1 163 1.2E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS05800 e11687cc7f6c39eb31e2a90da3360d2e 176 PANTHER PTHR23091 1 174 1.4E-26 T 22-04-2016 LMES_RS05800 e11687cc7f6c39eb31e2a90da3360d2e 176 Pfam PF13420 Acetyltransferase (GNAT) domain 3 156 1.2E-41 T 22-04-2016 LMES_RS04030 2ebe0cbbb4a4964cbf1fc3ba8fbbd467 655 Pfam PF02687 FtsX-like permease family 62 176 2.6E-6 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LMES_RS04030 2ebe0cbbb4a4964cbf1fc3ba8fbbd467 655 PIRSF PIRSF018968 1 654 3.8E-60 T 22-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 LMES_RS04030 2ebe0cbbb4a4964cbf1fc3ba8fbbd467 655 PANTHER PTHR30489 1 640 5.0E-21 T 22-04-2016 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 Pfam PF01196 Ribosomal protein L17 16 126 5.5E-36 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 Gene3D G3DSA:3.90.1030.10 2 127 8.9E-46 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 PANTHER PTHR14413 1 127 8.1E-50 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 126 26.867 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 SUPERFAMILY SSF64263 2 127 4.45E-40 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 PANTHER PTHR14413:SF5 1 127 8.1E-50 T 22-04-2016 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01030 508f70d203d1b55eeaf7dfd39f9a3ad5 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 127 3.0E-44 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 Gene3D G3DSA:1.20.5.440 99 143 5.4E-15 T 22-04-2016 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 10 141 20.599 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 SUPERFAMILY SSF46604 97 142 4.45E-5 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 97 142 1.2E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 Gene3D G3DSA:2.60.15.10 12 98 1.9E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 13 91 4.7E-22 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 SUPERFAMILY SSF51344 12 92 9.02E-19 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 41 95 9.0E-12 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 PANTHER PTHR13822 12 144 2.2E-27 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08390 1241b77b6a4bbaf0946851a3289d586e 148 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 12 140 3.6E-25 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PANTHER PTHR21060 66 414 1.9E-190 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PANTHER PTHR21060 1 45 1.9E-190 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PIRSF PIRSF000722 1 418 1.0E-139 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PANTHER PTHR21060:SF11 66 414 1.9E-190 T 22-04-2016 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PANTHER PTHR21060:SF11 1 45 1.9E-190 T 22-04-2016 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 Hamap MF_00020 Acetate kinase [ackA]. 1 418 177.414 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 224 241 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 Gene3D G3DSA:3.30.420.40 226 413 7.2E-74 T 22-04-2016 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 SUPERFAMILY SSF53067 178 414 3.67E-86 T 22-04-2016 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PRINTS PR00471 Acetate kinase family signature 194 207 3.2E-38 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PRINTS PR00471 Acetate kinase family signature 342 358 3.2E-38 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PRINTS PR00471 Acetate kinase family signature 224 245 3.2E-38 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PRINTS PR00471 Acetate kinase family signature 4 15 3.2E-38 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PRINTS PR00471 Acetate kinase family signature 396 408 3.2E-38 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 PRINTS PR00471 Acetate kinase family signature 320 333 3.2E-38 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 Pfam PF00871 Acetokinase family 3 45 4.5E-7 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 Pfam PF00871 Acetokinase family 59 409 5.5E-138 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 SUPERFAMILY SSF53067 1 215 3.97E-65 T 22-04-2016 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 Gene3D G3DSA:3.30.420.40 132 225 2.1E-6 T 22-04-2016 LMES_RS05540 6f5c38ddd55de36060ce8a5aab889e3c 418 TIGRFAM TIGR00016 ackA: acetate kinase 59 414 2.1E-142 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS04260 21e0ea9d19738aa7059a43579a97373a 115 Pfam PF03551 Transcriptional regulator PadR-like family 18 87 1.6E-19 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal LMES_RS04260 21e0ea9d19738aa7059a43579a97373a 115 PANTHER PTHR33169:SF1 1 107 6.1E-27 T 22-04-2016 LMES_RS04260 21e0ea9d19738aa7059a43579a97373a 115 SUPERFAMILY SSF46785 8 104 3.93E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04260 21e0ea9d19738aa7059a43579a97373a 115 PANTHER PTHR33169 1 107 6.1E-27 T 22-04-2016 LMES_RS04260 21e0ea9d19738aa7059a43579a97373a 115 Gene3D G3DSA:1.10.10.10 3 110 1.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 ProSitePatterns PS00512 Alpha-galactosidase signature. 366 381 - T 22-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PIRSF PIRSF005536 4 738 9.0E-299 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 32 292 6.9E-86 T 22-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PANTHER PTHR22762:SF81 335 716 8.3E-84 T 22-04-2016 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 657 734 4.2E-16 T 22-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 Pfam PF02065 Melibiase 297 644 2.3E-163 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 SUPERFAMILY SSF51445 334 675 5.51E-107 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PANTHER PTHR22762 335 716 8.3E-84 T 22-04-2016 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 365 380 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 299 319 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 337 351 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 248 263 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 529 545 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 554 570 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 475 490 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 PRINTS PR00743 Glycosyl hydrolase family 36 signature 417 439 1.8E-65 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LMES_RS04230 21852b993a54890e2b6aaff65a4925e0 740 Gene3D G3DSA:3.20.20.70 334 628 9.5E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PANTHER PTHR22807:SF36 1 249 2.7E-102 T 22-04-2016 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PANTHER PTHR22807:SF36 266 366 2.7E-102 T 22-04-2016 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 2 84 2.7E-16 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 SUPERFAMILY SSF53335 3 309 1.49E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 418 466 3.6E-15 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 Pfam PF01189 16S rRNA methyltransferase RsmB/F 90 307 1.2E-44 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 292 309 4.0E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 166 178 4.0E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 70 84 4.0E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 99 109 4.0E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 216 232 4.0E-24 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 338 401 2.4E-21 T 22-04-2016 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 Gene3D G3DSA:3.40.50.150 82 309 9.4E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PANTHER PTHR22807 1 249 2.7E-102 T 22-04-2016 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 PANTHER PTHR22807 266 366 2.7E-102 T 22-04-2016 LMES_RS03325 884eb7b0a6e543e580d0386357997feb 470 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 165 176 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS04020 6c97014f6f11991e810e0d60cb83a20e 331 PANTHER PTHR24423 97 325 3.8E-50 T 22-04-2016 LMES_RS04020 6c97014f6f11991e810e0d60cb83a20e 331 PANTHER PTHR24423:SF557 97 325 3.8E-50 T 22-04-2016 LMES_RS04020 6c97014f6f11991e810e0d60cb83a20e 331 SMART SM00387 222 329 8.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04020 6c97014f6f11991e810e0d60cb83a20e 331 Gene3D G3DSA:3.30.565.10 182 325 8.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04020 6c97014f6f11991e810e0d60cb83a20e 331 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 223 327 7.7E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04020 6c97014f6f11991e810e0d60cb83a20e 331 SUPERFAMILY SSF55874 169 325 8.25E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 SUPERFAMILY SSF55205 1 418 3.6E-122 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 3.7E-142 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 1.6E-77 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 38.143 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 Gene3D G3DSA:3.65.10.10 222 419 3.0E-52 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 PANTHER PTHR21090:SF19 1 417 6.4E-144 T 22-04-2016 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 Gene3D G3DSA:3.65.10.10 21 221 8.0E-56 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LMES_RS02140 288065ee4e4d0d2ee829a0940c85e82e 428 PANTHER PTHR21090 1 417 6.4E-144 T 22-04-2016 LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 SUPERFAMILY SSF52540 1 238 4.91E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 Gene3D G3DSA:3.40.50.300 1 239 8.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 PANTHER PTHR24220:SF550 3 241 4.1E-122 T 22-04-2016 LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 PANTHER PTHR24220 3 241 4.1E-122 T 22-04-2016 LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 SMART SM00382 26 216 8.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 Pfam PF00005 ABC transporter 18 168 2.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01750 50048721acb786b8308a5c3b816db24c 245 PIRSF PIRSF039085 1 244 8.8E-104 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS00075 cbe3b9bf0ab9dc98985b8e8f594c5019 124 SUPERFAMILY SSF54637 3 117 5.27E-22 T 22-04-2016 IPR029069 HotDog domain LMES_RS00075 cbe3b9bf0ab9dc98985b8e8f594c5019 124 Pfam PF03061 Thioesterase superfamily 33 102 2.2E-12 T 22-04-2016 IPR006683 Thioesterase domain LMES_RS00075 cbe3b9bf0ab9dc98985b8e8f594c5019 124 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 3 116 2.8E-24 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain LMES_RS00075 cbe3b9bf0ab9dc98985b8e8f594c5019 124 Gene3D G3DSA:3.10.129.10 2 121 1.8E-34 T 22-04-2016 IPR029069 HotDog domain LMES_RS00075 cbe3b9bf0ab9dc98985b8e8f594c5019 124 PANTHER PTHR12418:SF33 3 117 1.4E-30 T 22-04-2016 LMES_RS00075 cbe3b9bf0ab9dc98985b8e8f594c5019 124 PANTHER PTHR12418 3 117 1.4E-30 T 22-04-2016 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 Pfam PF00696 Amino acid kinase family 7 217 1.0E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 4.9E-97 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 Gene3D G3DSA:3.40.1160.10 2 238 3.2E-84 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 PANTHER PTHR21499:SF23 3 241 1.2E-114 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 PANTHER PTHR21499 3 241 1.2E-114 T 22-04-2016 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 SUPERFAMILY SSF53633 5 239 3.4E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 43.86 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LMES_RS05265 a5c4a3a725541510960b0d1059811767 241 PIRSF PIRSF005650 1 241 1.9E-92 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 PANTHER PTHR10992 1 260 5.7E-45 T 22-04-2016 LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 17 265 30.913 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 22 262 2.8E-73 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 PANTHER PTHR10992:SF880 1 260 5.7E-45 T 22-04-2016 LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 Pfam PF00561 alpha/beta hydrolase fold 25 254 6.4E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 SUPERFAMILY SSF53474 4 262 2.03E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS03615 3802422c33d6d815a99e4797a54e73da 266 Gene3D G3DSA:3.40.50.1820 13 262 8.0E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 Gene3D G3DSA:3.40.50.720 138 262 3.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PANTHER PTHR10025 1 279 1.2E-104 T 22-04-2016 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 129 280 2.6E-57 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 Gene3D G3DSA:3.40.192.10 6 137 2.3E-30 T 22-04-2016 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 116 2.8E-28 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 SUPERFAMILY SSF51735 126 279 3.24E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 105 126 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 29 51 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 70 97 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 152 172 9.2E-64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 SUPERFAMILY SSF53223 1 117 2.78E-28 T 22-04-2016 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 281 30.64 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS02195 cebe9fadb063159f44948a71c26aa07c 281 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 228 318 1.2E-13 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 1393 1464 2.1E-13 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 150 227 2.2E-15 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 1326 1392 6.6E-17 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 1261 1325 4.3E-12 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 1204 1260 7.1E-15 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Pfam PF02324 Glycosyl hydrolase family 70 370 1169 0.0 T 22-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1193 1256 5.6E-15 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 166 218 1.4E-17 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1258 1321 2.0E-17 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1323 1375 1.3E-14 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.20.120.10 1162 1203 1.4E-6 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:3.20.20.80 947 1030 6.1E-21 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:2.10.270.10 1465 1523 1.2E-4 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 9 29 2.9E-6 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 SUPERFAMILY SSF51445 712 759 2.5E-35 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 SUPERFAMILY SSF51445 482 675 2.5E-35 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 SUPERFAMILY SSF69360 1371 1484 2.55E-19 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 SUPERFAMILY SSF69360 1150 1356 5.95E-36 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 SUPERFAMILY SSF51445 922 1072 2.37E-25 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 SUPERFAMILY SSF69360 150 304 8.63E-32 T 22-04-2016 LMES_RS07815 d0656d56a86b85f890099b5f4ae9909f 1527 Gene3D G3DSA:3.20.20.80 465 767 1.8E-25 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 SUPERFAMILY SSF101473 7 205 1.31E-45 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 Pfam PF13684 Dihydroxyacetone kinase family 246 568 3.2E-118 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 SMART SM01120 39 204 7.9E-71 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 15 568 1.2E-200 T 22-04-2016 IPR019986 DAK2 domain-containing protein YloV LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 PANTHER PTHR33434:SF4 8 568 4.1E-210 T 22-04-2016 LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 Pfam PF02734 DAK2 domain 39 203 5.6E-41 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 PANTHER PTHR33434 8 568 4.1E-210 T 22-04-2016 LMES_RS06655 6cdd5a19e9021c40dc8ebdc4d2b22b51 568 SMART SM01121 246 568 1.0E-183 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 PANTHER PTHR10099:SF2 9 731 0.0 T 22-04-2016 LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 PIRSF PIRSF001587 6 738 2.2E-286 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 SUPERFAMILY SSF56042 572 722 4.78E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 PANTHER PTHR10099 9 731 0.0 T 22-04-2016 LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 88 193 5.8E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Pfam PF00586 AIR synthase related protein, N-terminal domain 444 560 5.9E-22 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 738 289.326 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Gene3D G3DSA:3.90.650.10 255 361 4.3E-5 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 574 707 2.2E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 1.4E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 SUPERFAMILY SSF55326 395 567 3.27E-54 T 22-04-2016 LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 22 732 2.0E-272 T 22-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 SUPERFAMILY SSF56042 203 427 5.38E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Gene3D G3DSA:3.30.1330.10 55 196 7.1E-46 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 Gene3D G3DSA:3.30.1330.10 417 564 9.0E-55 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LMES_RS03475 f4af4730cb17686a7dfab68323b64edc 738 SUPERFAMILY SSF55326 17 198 1.94E-49 T 22-04-2016 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 Gene3D G3DSA:3.20.20.70 8 255 4.7E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 SUPERFAMILY SSF51366 1 254 9.32E-78 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 Pfam PF00290 Tryptophan synthase alpha chain 9 254 3.5E-84 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 PANTHER PTHR10314 69 234 4.4E-16 T 22-04-2016 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 PANTHER PTHR10314 1 46 4.4E-16 T 22-04-2016 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 PANTHER PTHR10314:SF4 69 234 4.4E-16 T 22-04-2016 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 PANTHER PTHR10314:SF4 1 46 4.4E-16 T 22-04-2016 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 251 3.7E-77 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS05140 64c97f25fdc51a19edb1fa1500828da9 258 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 9 253 33.028 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS00435 70f94c670a7cef6586116eba033c7aa0 267 PANTHER PTHR20858 1 259 4.0E-62 T 22-04-2016 LMES_RS00435 70f94c670a7cef6586116eba033c7aa0 267 Gene3D G3DSA:3.40.1190.20 2 257 8.1E-58 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS00435 70f94c670a7cef6586116eba033c7aa0 267 SUPERFAMILY SSF53613 1 258 3.9E-53 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS00435 70f94c670a7cef6586116eba033c7aa0 267 Pfam PF08543 Phosphomethylpyrimidine kinase 11 256 2.9E-58 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LMES_RS00435 70f94c670a7cef6586116eba033c7aa0 267 PANTHER PTHR20858:SF19 1 259 4.0E-62 T 22-04-2016 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 PIRSF PIRSF002134 1 123 8.5E-42 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 Gene3D G3DSA:1.10.8.50 1 73 4.6E-28 T 22-04-2016 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 121 27.0 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 Gene3D G3DSA:4.10.910.10 74 123 5.1E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 PANTHER PTHR10871 1 123 1.8E-62 T 22-04-2016 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 116 5.7E-49 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 89 102 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 Pfam PF00416 Ribosomal protein S13/S18 3 110 9.0E-31 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01015 069cd45629d51536a9ea4e18969e922a 123 SUPERFAMILY SSF46946 2 115 3.93E-41 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LMES_RS00990 a4e2e9aeedf1d9fda44291ec9e8f1bf5 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 20.071 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 LMES_RS00990 a4e2e9aeedf1d9fda44291ec9e8f1bf5 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 141 1.1E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P LMES_RS00990 a4e2e9aeedf1d9fda44291ec9e8f1bf5 144 SUPERFAMILY SSF52080 4 140 1.83E-43 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P LMES_RS00990 a4e2e9aeedf1d9fda44291ec9e8f1bf5 144 Gene3D G3DSA:3.100.10.10 32 143 4.6E-33 T 22-04-2016 LMES_RS00990 a4e2e9aeedf1d9fda44291ec9e8f1bf5 144 PANTHER PTHR12934 1 140 1.2E-65 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00990 a4e2e9aeedf1d9fda44291ec9e8f1bf5 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 141 9.3E-52 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 LMES_RS07560 50540fc9d5ef811727e3acd48993784a 319 SUPERFAMILY SSF101478 5 278 3.79E-32 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 LMES_RS07560 50540fc9d5ef811727e3acd48993784a 319 Pfam PF03747 ADP-ribosylglycohydrolase 42 278 5.9E-20 T 22-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 216 4.8E-91 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 SMART SM01211 1 218 1.7E-113 T 22-04-2016 LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 Gene3D G3DSA:3.40.50.880 1 215 3.3E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 216 42.216 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 204 1.9E-42 T 22-04-2016 LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 SUPERFAMILY SSF52317 1 215 4.17E-71 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 PANTHER PTHR10099 1 220 4.1E-110 T 22-04-2016 LMES_RS03470 aaeffe44b17bbe724b6ce118f664f0c0 222 PIRSF PIRSF001586 1 220 3.5E-83 T 22-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 374 5.7E-8 T 22-04-2016 IPR000014 PAS domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Gene3D G3DSA:3.30.565.10 431 611 1.4E-50 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SUPERFAMILY SSF47384 363 445 5.89E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PANTHER PTHR24423 247 621 1.3E-145 T 22-04-2016 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PANTHER PTHR24423 1 12 1.3E-145 T 22-04-2016 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SMART SM00387 499 611 5.5E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 608 2.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 2.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 2.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 589 2.0E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SMART SM00388 377 444 3.3E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Pfam PF00512 His Kinase A (phospho-acceptor) domain 378 444 3.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SUPERFAMILY SSF55874 433 609 5.89E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SUPERFAMILY SSF158472 205 254 5.89E-8 T 22-04-2016 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PANTHER PTHR24423:SF568 247 621 1.3E-145 T 22-04-2016 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 PANTHER PTHR24423:SF568 1 12 1.3E-145 T 22-04-2016 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Pfam PF00989 PAS fold 265 368 3.2E-9 T 22-04-2016 IPR013767 PAS fold GO:0006355 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Gene3D G3DSA:3.30.450.20 261 368 9.6E-14 T 22-04-2016 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SUPERFAMILY SSF55785 254 369 5.76E-12 T 22-04-2016 IPR000014 PAS domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Pfam PF00672 HAMP domain 186 253 7.9E-17 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SMART SM00304 205 257 3.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 607 6.4E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 SMART SM00091 264 330 2.4E-7 T 22-04-2016 IPR000014 PAS domain LMES_RS08805 7be120849e4ab4d1eb585223d7441bd2 621 Gene3D G3DSA:1.10.287.130 369 430 3.7E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 3.2E-48 T 22-04-2016 IPR023214 HAD-like domain LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 Gene3D G3DSA:3.30.1240.10 84 182 3.8E-16 T 22-04-2016 LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 Gene3D G3DSA:3.40.50.1000 183 266 1.4E-42 T 22-04-2016 IPR023214 HAD-like domain LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 Gene3D G3DSA:3.40.50.1000 1 74 1.4E-42 T 22-04-2016 IPR023214 HAD-like domain LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 3.3E-23 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 PANTHER PTHR10000 1 267 8.7E-40 T 22-04-2016 LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 PANTHER PTHR10000:SF27 1 267 8.7E-40 T 22-04-2016 LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 SUPERFAMILY SSF56784 1 266 3.76E-52 T 22-04-2016 IPR023214 HAD-like domain LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 8.2E-45 T 22-04-2016 IPR000150 Cof protein GO:0016787 LMES_RS06960 9a989d4e33ae6fe16d44306e1389555c 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 22-04-2016 LMES_RS05030 f636332a15e497edd0b62aa509b004df 456 Gene3D G3DSA:3.30.465.10 106 209 5.1E-11 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LMES_RS05030 f636332a15e497edd0b62aa509b004df 456 Pfam PF01565 FAD binding domain 42 181 2.9E-26 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LMES_RS05030 f636332a15e497edd0b62aa509b004df 456 Gene3D G3DSA:3.30.43.10 27 102 2.7E-9 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LMES_RS05030 f636332a15e497edd0b62aa509b004df 456 PANTHER PTHR11748 40 212 7.4E-48 T 22-04-2016 LMES_RS05030 f636332a15e497edd0b62aa509b004df 456 SUPERFAMILY SSF56176 35 212 8.88E-44 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 234 406 9.5E-36 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 Gene3D G3DSA:3.30.930.10 107 427 1.3E-134 T 22-04-2016 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PRINTS PR00981 Seryl-tRNA synthetase signature 358 374 2.6E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PRINTS PR00981 Seryl-tRNA synthetase signature 271 283 2.6E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PRINTS PR00981 Seryl-tRNA synthetase signature 283 296 2.6E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PRINTS PR00981 Seryl-tRNA synthetase signature 323 336 2.6E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PRINTS PR00981 Seryl-tRNA synthetase signature 340 356 2.6E-29 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 5.5E-159 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PANTHER PTHR11778:SF0 1 434 3.2E-198 T 22-04-2016 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PANTHER PTHR11778 1 434 3.2E-198 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.9E-27 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 SUPERFAMILY SSF55681 138 424 1.28E-96 T 22-04-2016 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 SUPERFAMILY SSF46589 1 113 7.32E-27 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 Gene3D G3DSA:1.10.287.40 1 105 8.4E-25 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 PIRSF PIRSF001529 1 432 7.8E-169 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00835 83c055cca61d098341f30d530c98e770 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 39.983 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 Gene3D G3DSA:3.30.860.10 1 90 1.4E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.7E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.7E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.7E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 Pfam PF00203 Ribosomal protein S19 3 83 1.4E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 PANTHER PTHR11880 1 92 2.7E-51 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 PIRSF PIRSF002144 1 92 8.9E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 SUPERFAMILY SSF54570 3 84 3.79E-34 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.925 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 LMES_RS00920 d44ddceb3af89b2a19443124b947bc67 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 3.1E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 PANTHER PTHR10996:SF121 1 345 2.5E-104 T 22-04-2016 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 Gene3D G3DSA:3.30.70.260 300 385 1.0E-19 T 22-04-2016 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 Gene3D G3DSA:3.40.50.720 93 273 1.8E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 Gene3D G3DSA:3.40.50.720 48 92 3.7E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 35 303 2.4E-14 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 PANTHER PTHR10996 1 345 2.5E-104 T 22-04-2016 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 SUPERFAMILY SSF52283 32 102 3.4E-15 T 22-04-2016 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 271 1.6E-39 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 SUPERFAMILY SSF55021 308 384 8.1E-13 T 22-04-2016 LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 SUPERFAMILY SSF51735 85 271 2.3E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06445 2736aeaa711d343766140b2207749ac0 392 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 137 164 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 SUPERFAMILY SSF56300 2 271 7.59E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PIRSF PIRSF036361 1 445 1.6E-143 T 22-04-2016 IPR011240 Phosphoesterase-related protein YunD LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 Pfam PF02872 5'-nucleotidase, C-terminal domain 293 409 1.0E-5 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 Gene3D G3DSA:3.60.21.10 2 276 2.9E-56 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PRINTS PR01607 Apyrase family signature 165 182 2.2E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PRINTS PR01607 Apyrase family signature 2 20 2.2E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PRINTS PR01607 Apyrase family signature 211 231 2.2E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PRINTS PR01607 Apyrase family signature 395 414 2.2E-8 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 Gene3D G3DSA:3.90.780.10 293 442 3.5E-12 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 Pfam PF00149 Calcineurin-like phosphoesterase 5 200 6.1E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PANTHER PTHR11575:SF23 4 438 7.0E-88 T 22-04-2016 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 PANTHER PTHR11575 4 438 7.0E-88 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 ProSitePatterns PS00785 5'-nucleotidase signature 1. 4 16 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 LMES_RS05750 db3e727a1c44ae5e9faa4532b4dbb2cb 447 SUPERFAMILY SSF55816 292 443 2.49E-19 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 LMES_RS06955 e27fd00bc2c0977b1f0e0cac251bc607 280 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 5 273 6.9E-62 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 LMES_RS06955 e27fd00bc2c0977b1f0e0cac251bc607 280 Gene3D G3DSA:3.20.20.140 1 271 1.1E-26 T 22-04-2016 LMES_RS06955 e27fd00bc2c0977b1f0e0cac251bc607 280 Pfam PF02811 PHP domain 5 178 3.9E-9 T 22-04-2016 IPR004013 PHP domain GO:0003824 LMES_RS06955 e27fd00bc2c0977b1f0e0cac251bc607 280 SUPERFAMILY SSF89550 3 275 7.19E-36 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LMES_RS06955 e27fd00bc2c0977b1f0e0cac251bc607 280 PANTHER PTHR21039 3 278 4.0E-56 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 PANTHER PTHR15238 1 49 9.9E-16 T 22-04-2016 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 Pfam PF00471 Ribosomal protein L33 4 49 1.3E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.377 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 SUPERFAMILY SSF57829 1 49 7.32E-15 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 49 1.7E-16 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05925 6e86047e7b0f21f321abb171bdc93f4a 49 PANTHER PTHR15238:SF3 1 49 9.9E-16 T 22-04-2016 LMES_RS09220 df0c4bd2b9f7a21840f2be6203a038e9 476 SUPERFAMILY SSF101960 43 471 4.18E-133 T 22-04-2016 LMES_RS09220 df0c4bd2b9f7a21840f2be6203a038e9 476 PANTHER PTHR30508:SF1 25 476 1.3E-218 T 22-04-2016 LMES_RS09220 df0c4bd2b9f7a21840f2be6203a038e9 476 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 22 467 7.3E-211 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 LMES_RS09220 df0c4bd2b9f7a21840f2be6203a038e9 476 PANTHER PTHR30508 25 476 1.3E-218 T 22-04-2016 LMES_RS09220 df0c4bd2b9f7a21840f2be6203a038e9 476 Pfam PF01458 Uncharacterized protein family (UPF0051) 222 447 5.8E-70 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 LMES_RS09060 5f2168b8c3ee6ffbc9a1ce2c15d87b26 173 Gene3D G3DSA:1.10.10.10 6 88 2.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09060 5f2168b8c3ee6ffbc9a1ce2c15d87b26 173 PANTHER PTHR33169:SF4 6 169 3.9E-29 T 22-04-2016 LMES_RS09060 5f2168b8c3ee6ffbc9a1ce2c15d87b26 173 PANTHER PTHR33169 6 169 3.9E-29 T 22-04-2016 LMES_RS09060 5f2168b8c3ee6ffbc9a1ce2c15d87b26 173 SUPERFAMILY SSF46785 8 171 1.66E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09060 5f2168b8c3ee6ffbc9a1ce2c15d87b26 173 Pfam PF10400 Virulence activator alpha C-term 94 171 2.5E-6 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal LMES_RS09060 5f2168b8c3ee6ffbc9a1ce2c15d87b26 173 Pfam PF03551 Transcriptional regulator PadR-like family 9 82 3.4E-18 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 Gene3D G3DSA:3.20.20.140 10 261 5.6E-88 T 22-04-2016 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 135 145 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 SUPERFAMILY SSF51556 14 261 8.29E-84 T 22-04-2016 IPR032466 Metal-dependent hydrolase LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 14 261 2.3E-81 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 Pfam PF01026 TatD related DNase 15 261 1.9E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 PANTHER PTHR10060:SF20 15 265 5.8E-107 T 22-04-2016 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 PANTHER PTHR10060 15 265 5.8E-107 T 22-04-2016 IPR001130 TatD family GO:0016788 LMES_RS07235 61057f39cfd2a4e71511b95320b8567c 265 PIRSF PIRSF005902 3 265 3.2E-77 T 22-04-2016 IPR001130 TatD family GO:0016788 LMES_RS06725 736d29020e88b091fcdc59b86f967b62 255 Pfam PF04973 Nicotinamide mononucleotide transporter 58 250 1.4E-35 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LMES_RS06725 736d29020e88b091fcdc59b86f967b62 255 PANTHER PTHR36122:SF2 34 255 4.2E-32 T 22-04-2016 LMES_RS06725 736d29020e88b091fcdc59b86f967b62 255 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 57 254 3.8E-39 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LMES_RS06725 736d29020e88b091fcdc59b86f967b62 255 PANTHER PTHR36122 34 255 4.2E-32 T 22-04-2016 LMES_RS07960 2b24d5831949b89d0ab765f5b9f22756 137 PANTHER PTHR23091 1 137 2.4E-23 T 22-04-2016 LMES_RS07960 2b24d5831949b89d0ab765f5b9f22756 137 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 132 4.8E-29 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 LMES_RS07960 2b24d5831949b89d0ab765f5b9f22756 137 Gene3D G3DSA:3.40.630.30 2 136 1.1E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07960 2b24d5831949b89d0ab765f5b9f22756 137 SUPERFAMILY SSF55729 1 136 3.84E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07960 2b24d5831949b89d0ab765f5b9f22756 137 PANTHER PTHR23091:SF122 1 137 2.4E-23 T 22-04-2016 LMES_RS07960 2b24d5831949b89d0ab765f5b9f22756 137 Pfam PF13673 Acetyltransferase (GNAT) domain 47 135 2.5E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 Pfam PF01047 MarR family 39 97 6.6E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 PANTHER PTHR33164 9 151 3.0E-22 T 22-04-2016 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 Gene3D G3DSA:1.10.10.10 8 148 5.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 SMART SM00347 32 132 7.2E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 SUPERFAMILY SSF46785 12 150 1.17E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 5.7E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 5.7E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 5.7E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS01440 f2213d8cd9eeb7435c12a78921fde12b 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 5.7E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 SUPERFAMILY SSF50249 126 231 2.57E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 Hamap MF_01895 Ribonuclease R [rnr]. 25 712 53.292 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 Pfam PF00575 S1 RNA binding domain 632 707 7.0E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 Gene3D G3DSA:2.40.50.140 635 723 4.1E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 Pfam PF00773 RNB domain 254 579 2.2E-107 T 22-04-2016 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 SUPERFAMILY SSF50249 630 707 1.72E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 SMART SM00955 254 583 8.7E-178 T 22-04-2016 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 TIGRFAM TIGR02063 RNase_R: ribonuclease R 6 712 7.6E-242 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 Pfam PF08206 Ribonuclease B OB domain 76 130 2.0E-11 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 ProSitePatterns PS01175 Ribonuclease II family signature. 550 574 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 PANTHER PTHR23355:SF9 73 745 4.6E-215 T 22-04-2016 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 SUPERFAMILY SSF50249 214 629 3.2E-140 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 72 712 1.4E-191 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 SMART SM00316 630 712 2.2E-15 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 PANTHER PTHR23355 73 745 4.6E-215 T 22-04-2016 LMES_RS07710 3b455aebb35cb3f36f0f2fea8b3ff7bb 774 SUPERFAMILY SSF50249 59 135 1.18E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00615 fa119a4fbebd74f1933813967560ac48 240 PANTHER PTHR30614 4 231 1.7E-55 T 22-04-2016 LMES_RS00615 fa119a4fbebd74f1933813967560ac48 240 Gene3D G3DSA:1.10.3720.10 14 225 1.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00615 fa119a4fbebd74f1933813967560ac48 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 223 9.8E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00615 fa119a4fbebd74f1933813967560ac48 240 SUPERFAMILY SSF161098 15 211 4.06E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00615 fa119a4fbebd74f1933813967560ac48 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 118 1.0E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS07725 aa96ef56c7a0c3084004fe01ef12ab25 307 PANTHER PTHR12428:SF20 30 258 2.3E-48 T 22-04-2016 LMES_RS07725 aa96ef56c7a0c3084004fe01ef12ab25 307 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 55 242 5.2E-35 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LMES_RS07725 aa96ef56c7a0c3084004fe01ef12ab25 307 PANTHER PTHR12428 30 258 2.3E-48 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LMES_RS07725 aa96ef56c7a0c3084004fe01ef12ab25 307 Pfam PF02096 60Kd inner membrane protein 56 241 1.3E-32 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 Gene3D G3DSA:1.10.560.10 3 194 2.1E-46 T 22-04-2016 IPR027413 GroEL-like equatorial domain LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 40.573 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 PANTHER PTHR11353 1 539 3.2E-240 T 22-04-2016 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 1.6E-250 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 Gene3D G3DSA:3.50.7.10 195 364 3.1E-94 T 22-04-2016 IPR027409 GroEL-like apical domain LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 SUPERFAMILY SSF52029 182 374 1.65E-81 T 22-04-2016 IPR027409 GroEL-like apical domain LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 SUPERFAMILY SSF54849 137 194 1.37E-19 T 22-04-2016 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 Gene3D G3DSA:1.10.560.10 365 515 1.2E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 2.4E-101 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 PRINTS PR00298 60kDa chaperonin signature 26 52 1.4E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 PRINTS PR00298 60kDa chaperonin signature 266 289 1.4E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 PRINTS PR00298 60kDa chaperonin signature 82 109 1.4E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 PRINTS PR00298 60kDa chaperonin signature 396 417 1.4E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 PRINTS PR00298 60kDa chaperonin signature 348 373 1.4E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 SUPERFAMILY SSF48592 6 133 2.67E-77 T 22-04-2016 LMES_RS07890 1c7a410892b8ba654120c4d7e9bf3725 539 SUPERFAMILY SSF48592 404 518 2.67E-77 T 22-04-2016 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 Gene3D G3DSA:1.10.10.10 10 66 4.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 PRINTS PR01467 Bacterial arginine repressor signature 124 139 5.1E-12 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 PRINTS PR01467 Bacterial arginine repressor signature 38 53 5.1E-12 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 PRINTS PR01467 Bacterial arginine repressor signature 94 107 5.1E-12 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 PRINTS PR01467 Bacterial arginine repressor signature 22 35 5.1E-12 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 Gene3D G3DSA:3.30.1360.40 81 154 1.4E-18 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 Pfam PF02863 Arginine repressor, C-terminal domain 87 150 1.1E-16 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 PANTHER PTHR34471:SF1 1 155 2.0E-28 T 22-04-2016 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 SUPERFAMILY SSF55252 86 154 2.49E-14 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 Hamap MF_00173 Arginine repressor [argR]. 1 156 45.925 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 Pfam PF01316 Arginine repressor, DNA binding domain 2 69 2.0E-18 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 SUPERFAMILY SSF46785 1 69 1.09E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 PANTHER PTHR34471 1 155 2.0E-28 T 22-04-2016 LMES_RS05350 4a267f6d7e96151c88590c2f5ac969c4 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 93 136 9.0E-6 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 Pfam PF04616 Glycosyl hydrolases family 43 4 315 2.0E-83 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 Gene3D G3DSA:2.115.10.20 4 329 1.8E-83 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 PANTHER PTHR22925:SF44 262 547 1.3E-109 T 22-04-2016 LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 PANTHER PTHR22925:SF44 4 242 1.3E-109 T 22-04-2016 LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 SUPERFAMILY SSF75005 4 322 7.28E-85 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 SUPERFAMILY SSF49899 342 550 3.05E-39 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 Gene3D G3DSA:2.60.120.200 345 550 5.2E-31 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 PANTHER PTHR22925 262 547 1.3E-109 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 LMES_RS04085 87d515f572c356258d90d68e14a9e749 552 PANTHER PTHR22925 4 242 1.3E-109 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 LMES_RS03645 71f5fcced023222dfc967f0a0b3b46e2 328 SUPERFAMILY SSF53590 1 304 8.24E-88 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03645 71f5fcced023222dfc967f0a0b3b46e2 328 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 294 8.6E-64 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03645 71f5fcced023222dfc967f0a0b3b46e2 328 PANTHER PTHR12304 2 314 2.4E-84 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LMES_RS03645 71f5fcced023222dfc967f0a0b3b46e2 328 Gene3D G3DSA:3.90.245.10 1 306 7.8E-91 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS00910 526048dc26592ea6f4ce17b4eb251476 95 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site LMES_RS00910 526048dc26592ea6f4ce17b4eb251476 95 PANTHER PTHR11620 1 94 2.6E-25 T 22-04-2016 LMES_RS00910 526048dc26592ea6f4ce17b4eb251476 95 Gene3D G3DSA:3.30.70.330 1 93 3.0E-32 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 LMES_RS00910 526048dc26592ea6f4ce17b4eb251476 95 SUPERFAMILY SSF54189 1 92 1.65E-29 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00910 526048dc26592ea6f4ce17b4eb251476 95 Pfam PF00276 Ribosomal protein L23 5 87 1.9E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LMES_RS00910 526048dc26592ea6f4ce17b4eb251476 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 21.873 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LMES_RS01345 7823835df733043798f5bde43b7f0041 421 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 8 421 1.0E-117 T 22-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 LMES_RS01345 7823835df733043798f5bde43b7f0041 421 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 14 27 - T 22-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 LMES_RS01345 7823835df733043798f5bde43b7f0041 421 Gene3D G3DSA:2.115.10.20 20 290 1.0E-25 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LMES_RS01345 7823835df733043798f5bde43b7f0041 421 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 14 326 9.9E-91 T 22-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal LMES_RS01345 7823835df733043798f5bde43b7f0041 421 PANTHER PTHR30175:SF0 12 334 2.6E-76 T 22-04-2016 LMES_RS01345 7823835df733043798f5bde43b7f0041 421 SUPERFAMILY SSF49899 334 421 1.19E-6 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain LMES_RS01345 7823835df733043798f5bde43b7f0041 421 PANTHER PTHR30175 12 334 2.6E-76 T 22-04-2016 LMES_RS01345 7823835df733043798f5bde43b7f0041 421 SMART SM00640 14 412 4.6E-82 T 22-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 LMES_RS01345 7823835df733043798f5bde43b7f0041 421 SUPERFAMILY SSF75005 11 327 1.57E-95 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LMES_RS08585 3f9e70ac5ee8c06d0fbe58501a2d3fbe 165 Gene3D G3DSA:1.25.40.10 17 147 2.3E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS08585 3f9e70ac5ee8c06d0fbe58501a2d3fbe 165 Pfam PF12688 Tetratrico peptide repeat 41 141 9.5E-12 T 22-04-2016 LMES_RS08585 3f9e70ac5ee8c06d0fbe58501a2d3fbe 165 SUPERFAMILY SSF48452 8 159 5.26E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 Pfam PF00753 Metallo-beta-lactamase superfamily 16 164 2.1E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 Gene3D G3DSA:3.60.15.10 3 253 3.9E-62 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 PANTHER PTHR11203:SF38 1 583 2.5E-215 T 22-04-2016 LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 5 554 1.6E-145 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 SMART SM00849 16 216 1.3E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 SUPERFAMILY SSF56281 5 423 1.57E-66 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 PANTHER PTHR11203 1 583 2.5E-215 T 22-04-2016 LMES_RS03000 c787a372a914d19dcfb6edc097d29c60 609 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 364 405 1.2E-9 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LMES_RS04560 09b3bd1259a1461beba3e36d701b5a47 188 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 31 73 1.6E-5 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LMES_RS04560 09b3bd1259a1461beba3e36d701b5a47 188 SUPERFAMILY SSF51735 1 174 8.35E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04560 09b3bd1259a1461beba3e36d701b5a47 188 Gene3D G3DSA:3.40.50.720 1 165 1.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04560 09b3bd1259a1461beba3e36d701b5a47 188 PANTHER PTHR14239 1 163 8.1E-26 T 22-04-2016 LMES_RS02770 b4e5e9ee1a7c1bf982ea9d462026d51c 212 PANTHER PTHR24220 3 203 3.9E-84 T 22-04-2016 LMES_RS02770 b4e5e9ee1a7c1bf982ea9d462026d51c 212 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02770 b4e5e9ee1a7c1bf982ea9d462026d51c 212 SUPERFAMILY SSF52540 1 206 1.0E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02770 b4e5e9ee1a7c1bf982ea9d462026d51c 212 SMART SM00382 26 210 2.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02770 b4e5e9ee1a7c1bf982ea9d462026d51c 212 Gene3D G3DSA:3.40.50.300 1 204 9.3E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02770 b4e5e9ee1a7c1bf982ea9d462026d51c 212 Pfam PF00005 ABC transporter 18 162 3.1E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02965 87c5a3b77bd5c026e0b13dfe6f13b839 210 Pfam PF01712 Deoxynucleoside kinase 5 205 1.2E-52 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain LMES_RS02965 87c5a3b77bd5c026e0b13dfe6f13b839 210 PANTHER PTHR10513:SF17 1 210 6.5E-54 T 22-04-2016 LMES_RS02965 87c5a3b77bd5c026e0b13dfe6f13b839 210 PANTHER PTHR10513 1 210 6.5E-54 T 22-04-2016 LMES_RS02965 87c5a3b77bd5c026e0b13dfe6f13b839 210 PIRSF PIRSF000705 1 210 6.4E-57 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 LMES_RS02965 87c5a3b77bd5c026e0b13dfe6f13b839 210 Gene3D G3DSA:3.40.50.300 1 204 4.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02965 87c5a3b77bd5c026e0b13dfe6f13b839 210 SUPERFAMILY SSF52540 6 203 1.1E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07375 5c713d9578a157f1644252bcfa50f45d 380 Pfam PF04860 Phage portal protein 49 343 6.3E-40 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein LMES_RS07375 5c713d9578a157f1644252bcfa50f45d 380 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 41 347 1.1E-41 T 22-04-2016 IPR006427 Phage portal protein, HK97 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PANTHER PTHR10353:SF35 7 478 3.9E-226 T 22-04-2016 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 SUPERFAMILY SSF51445 3 470 2.61E-163 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 Pfam PF00232 Glycosyl hydrolase family 1 2 474 2.8E-135 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 Gene3D G3DSA:3.20.20.80 4 475 6.4E-152 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PANTHER PTHR10353 7 478 3.9E-226 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 2.2E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 2.2E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 2.2E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 2.2E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04475 4d986aedc6901a9cbd835dd0d70dcc86 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 305 319 2.2E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS00620 bbd64acfb3b9100541b66591453121ea 236 Gene3D G3DSA:1.10.3720.10 14 226 2.0E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00620 bbd64acfb3b9100541b66591453121ea 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 224 1.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00620 bbd64acfb3b9100541b66591453121ea 236 PANTHER PTHR30614 1 232 1.4E-53 T 22-04-2016 LMES_RS00620 bbd64acfb3b9100541b66591453121ea 236 SUPERFAMILY SSF161098 15 212 1.7E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 SUPERFAMILY SSF52374 1 200 1.34E-142 T 22-04-2016 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 SUPERFAMILY SSF52374 396 644 1.34E-142 T 22-04-2016 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 635 2.0E-195 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Pfam PF08264 Anticodon-binding domain of tRNA 680 831 6.9E-23 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Gene3D G3DSA:3.90.740.10 205 382 2.2E-46 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 918 18.934 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Gene3D G3DSA:1.10.730.10 636 820 9.4E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 836 3.0E-274 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Gene3D G3DSA:3.40.50.620 399 630 4.7E-130 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 Gene3D G3DSA:3.40.50.620 13 198 4.7E-130 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 SUPERFAMILY SSF47323 647 917 1.06E-61 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 522 535 2.5E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 2.5E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 2.5E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 556 565 2.5E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 394 409 2.5E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 SUPERFAMILY SSF50677 202 396 2.09E-45 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PANTHER PTHR11946 5 249 0.0 T 22-04-2016 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PANTHER PTHR11946 274 929 0.0 T 22-04-2016 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PANTHER PTHR11946:SF11 5 249 0.0 T 22-04-2016 LMES_RS06570 0deac73ef89d603fba11e1481e9bb0b9 930 PANTHER PTHR11946:SF11 274 929 0.0 T 22-04-2016 LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 Gene3D G3DSA:3.40.50.300 250 423 2.6E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 PANTHER PTHR30195 33 858 4.6E-168 T 22-04-2016 LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 SUPERFAMILY SSF52540 585 657 4.09E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 SUPERFAMILY SSF52540 274 312 4.09E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 SUPERFAMILY SSF52540 213 421 1.39E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 SMART SM00487 248 447 2.7E-12 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 54 685 2.2E-137 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 Pfam PF04851 Type III restriction enzyme, res subunit 252 421 3.0E-30 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 197 5.1E-35 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 PANTHER PTHR30195:SF16 33 858 4.6E-168 T 22-04-2016 LMES_RS06765 b89359c99253bcc06a0be9487b941256 953 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 691 950 7.5E-43 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 PANTHER PTHR11759 9 128 4.3E-68 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 ProSitePatterns PS00054 Ribosomal protein S11 signature. 96 118 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 SUPERFAMILY SSF53137 12 128 7.85E-48 T 22-04-2016 LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 Pfam PF00411 Ribosomal protein S11 18 127 6.6E-49 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 Gene3D G3DSA:3.30.420.80 6 128 1.2E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 128 32.884 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 PIRSF PIRSF002131 1 128 1.0E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LMES_RS01020 fef7136cde71a52fe2bee51043b27bd5 128 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 125 1.0E-57 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PRINTS PR01874 DNA repair protein radA signature 33 61 4.3E-77 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PRINTS PR01874 DNA repair protein radA signature 272 295 4.3E-77 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PRINTS PR01874 DNA repair protein radA signature 163 191 4.3E-77 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PRINTS PR01874 DNA repair protein radA signature 198 224 4.3E-77 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PRINTS PR01874 DNA repair protein radA signature 74 91 4.3E-77 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PRINTS PR01874 DNA repair protein radA signature 124 148 4.3E-77 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 SUPERFAMILY SSF54211 253 407 9.86E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 SUPERFAMILY SSF54211 205 219 9.86E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 Gene3D G3DSA:3.30.230.10 240 407 2.7E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 SMART SM00382 41 194 2.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 Pfam PF13541 Subunit ChlI of Mg-chelatase 314 380 3.6E-10 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 SUPERFAMILY SSF52540 19 241 1.16E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 Pfam PF13481 AAA domain 15 172 2.6E-16 T 22-04-2016 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 Gene3D G3DSA:3.40.50.300 9 226 4.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 TIGRFAM TIGR00416 sms: DNA repair protein RadA 7 402 1.4E-178 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LMES_RS00715 d41802195432089f38410b6f29bab1c5 408 PANTHER PTHR32472 8 404 1.7E-186 T 22-04-2016 LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 Pfam PF00582 Universal stress protein family 1 142 7.5E-27 T 22-04-2016 IPR006016 UspA GO:0006950 LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 SUPERFAMILY SSF52402 3 143 1.67E-31 T 22-04-2016 LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 PRINTS PR01438 Universal stress protein signature 103 115 1.0E-14 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 PRINTS PR01438 Universal stress protein signature 2 20 1.0E-14 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 PRINTS PR01438 Universal stress protein signature 121 143 1.0E-14 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 Gene3D G3DSA:3.40.50.620 3 142 4.7E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS05560 aebcc3a221399978c2801b2c230e3d73 143 PANTHER PTHR31964 1 142 9.1E-25 T 22-04-2016 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 SUPERFAMILY SSF48108 398 550 4.71E-36 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 SUPERFAMILY SSF56059 130 403 5.13E-60 T 22-04-2016 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Gene3D G3DSA:3.30.1490.20 137 199 1.7E-5 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 SMART SM01096 424 544 3.0E-37 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Gene3D G3DSA:3.40.50.20 536 655 6.1E-24 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 131 331 6.8E-29 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Gene3D G3DSA:1.10.1030.10 402 535 9.3E-33 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Gene3D G3DSA:3.30.470.20 200 401 8.5E-41 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 SUPERFAMILY SSF52440 5 122 2.01E-19 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 PANTHER PTHR11405 130 636 2.8E-65 T 22-04-2016 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 PANTHER PTHR11405:SF5 130 636 2.8E-65 T 22-04-2016 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Gene3D G3DSA:3.40.50.20 5 99 1.9E-14 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 544 3.0E-24 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 SUPERFAMILY SSF52440 554 652 1.58E-19 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 382 400 1.4E-22 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 203 222 1.4E-22 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 238 255 1.4E-22 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05970 7a4fe2131688effdec4ffa63547dfeec 833 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 1.4E-22 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 Pfam PF01433 Peptidase family M1 6 379 4.4E-129 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 SUPERFAMILY SSF63737 5 188 5.49E-46 T 22-04-2016 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 SUPERFAMILY SSF55486 196 445 2.05E-79 T 22-04-2016 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 Pfam PF11838 ERAP1-like C-terminal domain 509 815 1.4E-47 T 22-04-2016 IPR024571 ERAP1-like C-terminal domain LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PANTHER PTHR11533:SF190 6 844 1.5E-213 T 22-04-2016 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 Gene3D G3DSA:1.10.390.10 299 447 1.9E-47 T 22-04-2016 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 250 260 2.8E-28 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 2.8E-28 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 305 317 2.8E-28 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 171 186 2.8E-28 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 286 301 2.8E-28 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LMES_RS02410 617411d9d43ff9f5314e167b45ca0f6b 844 PANTHER PTHR11533 6 844 1.5E-213 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 Gene3D G3DSA:3.40.50.300 251 456 1.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 PANTHER PTHR24220 5 369 1.9E-57 T 22-04-2016 LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 SUPERFAMILY SSF52540 252 458 7.32E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 Pfam PF00005 ABC transporter 264 408 6.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 Pfam PF00005 ABC transporter 19 169 8.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 SMART SM00382 28 214 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 SMART SM00382 273 458 1.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 SUPERFAMILY SSF52540 4 223 9.66E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 ProSitePatterns PS00211 ABC transporters family signature. 381 395 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS06875 87a8f5c4f114580b3c14f4747ee5d91c 467 Gene3D G3DSA:3.40.50.300 3 224 2.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 PANTHER PTHR15239 1 400 2.8E-106 T 22-04-2016 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 PANTHER PTHR15239 417 557 2.8E-106 T 22-04-2016 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 PANTHER PTHR15239:SF1 1 400 2.8E-106 T 22-04-2016 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 PANTHER PTHR15239:SF1 417 557 2.8E-106 T 22-04-2016 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 Gene3D G3DSA:2.30.310.10 1 167 2.0E-58 T 22-04-2016 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 Pfam PF05670 Domain of unknown function (DUF814) 447 531 3.3E-25 T 22-04-2016 IPR008532 Domain of unknown function DUF814 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 440 3.2E-144 T 22-04-2016 LMES_RS06390 02eed9c4479c094822b42ac65bfd79e4 564 Gene3D G3DSA:3.40.970.40 239 287 1.9E-14 T 22-04-2016 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 417 1.5E-86 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 Pfam PF13180 PDZ domain 203 266 5.5E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 SMART SM00228 189 259 6.9E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 PANTHER PTHR22939 204 417 5.1E-59 T 22-04-2016 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 Pfam PF02163 Peptidase family M50 8 406 4.6E-78 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 SUPERFAMILY SSF50156 172 268 6.18E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 PANTHER PTHR22939:SF78 204 417 5.1E-59 T 22-04-2016 LMES_RS03300 f864980569a58f6cf6e378729884b494 417 Gene3D G3DSA:2.30.42.10 167 269 5.7E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 Pfam PF00753 Metallo-beta-lactamase superfamily 22 170 3.3E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 PIRSF PIRSF004803 4 560 2.2E-222 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 369 397 - T 22-04-2016 IPR001587 Ribonuclease J, conserved site LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 PANTHER PTHR11203 3 558 4.1E-218 T 22-04-2016 LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 364 412 1.2E-8 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 SUPERFAMILY SSF56281 14 428 4.32E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 Gene3D G3DSA:3.60.15.10 10 260 3.8E-71 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 Hamap MF_01491 Ribonuclease J [rnj]. 7 560 44.173 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 SMART SM00849 24 219 9.2E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 PANTHER PTHR11203:SF22 3 558 4.1E-218 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 LMES_RS07270 d6b051bf63827ff741a8162f18fcad0a 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 12 557 5.3E-197 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 SUPERFAMILY SSF53850 3 253 8.91E-63 T 22-04-2016 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 Gene3D G3DSA:3.40.190.10 213 254 3.5E-38 T 22-04-2016 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 Gene3D G3DSA:3.40.190.10 31 109 3.5E-38 T 22-04-2016 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 SMART SM00062 32 255 1.2E-51 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 PANTHER PTHR30614:SF0 33 481 3.9E-159 T 22-04-2016 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 Gene3D G3DSA:1.10.3720.10 262 480 6.3E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 253 1.5E-55 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 SUPERFAMILY SSF161098 277 469 4.58E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 PANTHER PTHR30614 33 481 3.9E-159 T 22-04-2016 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 Gene3D G3DSA:3.40.190.10 110 205 6.1E-24 T 22-04-2016 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 300 480 5.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02095 a4c4c8ce03e821b66bd9e74dc5a6acac 481 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 278 375 8.5E-28 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 787 808 1.8E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 612 628 1.8E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 468 486 1.8E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 584 600 1.8E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 644 669 1.8E-17 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Gene3D G3DSA:2.70.150.10 115 232 5.9E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Gene3D G3DSA:2.70.150.10 16 56 5.9E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SMART SM00831 2 76 2.8E-9 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 612 631 3.2E-42 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 3.2E-42 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 3.2E-42 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 542 3.2E-42 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 510 521 3.2E-42 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 648 3.2E-42 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PANTHER PTHR24093 764 878 8.4E-276 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 PANTHER PTHR24093 8 748 8.4E-276 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Pfam PF00702 haloacid dehalogenase-like hydrolase 330 626 3.0E-24 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Gene3D G3DSA:1.20.1110.10 581 872 3.9E-104 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Gene3D G3DSA:1.20.1110.10 57 114 3.9E-104 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Pfam PF00689 Cation transporting ATPase, C-terminus 697 872 3.5E-40 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Gene3D G3DSA:3.40.1110.10 324 517 1.0E-44 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 335 341 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF81653 120 231 3.53E-28 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF81660 342 518 2.83E-36 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Pfam PF00122 E1-E2 ATPase 88 324 7.8E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 584 703 3.8E-32 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 89 358 2.0E-39 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF56784 331 351 2.47E-54 T 22-04-2016 IPR023214 HAD-like domain LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF56784 465 715 2.47E-54 T 22-04-2016 IPR023214 HAD-like domain LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF81665 234 327 1.44E-109 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF81665 4 120 1.44E-109 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 SUPERFAMILY SSF81665 662 876 1.44E-109 T 22-04-2016 LMES_RS03975 baae749ad70ea9b3c5a464341de95e70 879 Pfam PF00690 Cation transporter/ATPase, N-terminus 7 71 2.7E-13 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 PANTHER PTHR11647:SF70 1 423 6.6E-161 T 22-04-2016 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 Gene3D G3DSA:2.30.40.10 3 66 1.8E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 Pfam PF01979 Amidohydrolase family 50 419 1.7E-34 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 ProSitePatterns PS00482 Dihydroorotase signature 1. 55 63 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 Gene3D G3DSA:3.20.20.140 67 405 3.7E-107 T 22-04-2016 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 PANTHER PTHR11647 1 423 6.6E-161 T 22-04-2016 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 422 1.6E-124 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 423 42.53 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 SUPERFAMILY SSF51338 365 423 1.57E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 SUPERFAMILY SSF51338 3 51 1.57E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 SUPERFAMILY SSF51556 52 362 1.21E-102 T 22-04-2016 IPR032466 Metal-dependent hydrolase LMES_RS05325 7990cbccd6118e7ef4a0c43a86525867 425 ProSitePatterns PS00483 Dihydroorotase signature 2. 300 311 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS03565 2c7b99b8a975efdd956c1e207c62e64a 557 Gene3D G3DSA:3.20.20.190 300 537 7.0E-41 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LMES_RS03565 2c7b99b8a975efdd956c1e207c62e64a 557 PANTHER PTHR23344:SF23 45 557 4.4E-35 T 22-04-2016 LMES_RS03565 2c7b99b8a975efdd956c1e207c62e64a 557 SUPERFAMILY SSF51695 304 532 9.68E-40 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LMES_RS03565 2c7b99b8a975efdd956c1e207c62e64a 557 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 310 527 1.2E-14 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LMES_RS03565 2c7b99b8a975efdd956c1e207c62e64a 557 PANTHER PTHR23344 45 557 4.4E-35 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LMES_RS07540 fb53d3b5a923993ec444817efe23af17 129 Pfam PF05656 Protein of unknown function (DUF805) 13 118 1.6E-15 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 LMES_RS02445 546cd2f315fc4eef1acfb3c6285c08ea 448 SMART SM00471 55 186 1.4E-12 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS02445 546cd2f315fc4eef1acfb3c6285c08ea 448 PANTHER PTHR11373 9 321 2.5E-88 T 22-04-2016 LMES_RS02445 546cd2f315fc4eef1acfb3c6285c08ea 448 Pfam PF01966 HD domain 59 179 1.1E-14 T 22-04-2016 IPR006674 HD domain LMES_RS02445 546cd2f315fc4eef1acfb3c6285c08ea 448 SUPERFAMILY SSF109604 5 420 4.36E-120 T 22-04-2016 LMES_RS02445 546cd2f315fc4eef1acfb3c6285c08ea 448 Gene3D G3DSA:1.10.3210.10 8 258 6.6E-87 T 22-04-2016 IPR006674 HD domain LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.7E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 PANTHER PTHR11761 1 122 3.3E-70 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 Gene3D G3DSA:2.40.150.20 1 122 5.5E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.1E-55 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.365 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 SUPERFAMILY SSF50193 1 122 6.15E-48 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LMES_RS00950 003fd851f632fdd3b60673813a2be5d7 122 SMART SM01374 1 122 3.8E-80 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 SUPERFAMILY SSF75304 4 481 1.05E-163 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 Gene3D G3DSA:3.90.1300.10 4 483 1.3E-180 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 474 3.3E-195 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 PANTHER PTHR11895:SF75 1 482 2.2E-219 T 22-04-2016 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 PANTHER PTHR11895 1 482 2.2E-219 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 ProSitePatterns PS00571 Amidases signature. 151 182 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 13 476 91.997 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS07060 db678f513960cc4655a74e8aaab09751 488 Pfam PF01425 Amidase 26 464 1.5E-161 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 Gene3D G3DSA:3.40.50.2300 2 124 5.4E-32 T 22-04-2016 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 SMART SM00448 3 113 3.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 PANTHER PTHR26402 3 223 9.6E-83 T 22-04-2016 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 PANTHER PTHR26402:SF519 3 223 9.6E-83 T 22-04-2016 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 Pfam PF00072 Response regulator receiver domain 5 113 4.5E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 SMART SM00862 148 223 1.0E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 SUPERFAMILY SSF52172 3 176 1.57E-32 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 Gene3D G3DSA:1.10.10.10 127 224 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04015 9c4549307a093d78c9503a77c57e7743 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 3.5E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 Gene3D G3DSA:3.40.50.300 3 213 2.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 PANTHER PTHR24220:SF587 4 217 5.5E-81 T 22-04-2016 LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 Pfam PF00005 ABC transporter 21 166 1.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 PANTHER PTHR24220 4 217 5.5E-81 T 22-04-2016 LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 SUPERFAMILY SSF52540 3 216 8.88E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02980 c9e7244fbb42c6bc9c6b917da87b46e0 220 SMART SM00382 29 217 3.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS05580 7fc963749a4a68ef692ddbb2b90f26f1 379 Gene3D G3DSA:3.40.640.10 1 242 4.6E-95 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS05580 7fc963749a4a68ef692ddbb2b90f26f1 379 Gene3D G3DSA:3.90.1150.10 243 377 9.1E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS05580 7fc963749a4a68ef692ddbb2b90f26f1 379 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 375 2.0E-149 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS05580 7fc963749a4a68ef692ddbb2b90f26f1 379 PANTHER PTHR11808 1 379 4.2E-183 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS05580 7fc963749a4a68ef692ddbb2b90f26f1 379 SUPERFAMILY SSF53383 4 377 2.02E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS05580 7fc963749a4a68ef692ddbb2b90f26f1 379 PIRSF PIRSF001434 1 379 7.9E-141 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS05680 10f9036d5dcf88af77f80a4a0868fc94 288 PIRSF PIRSF006483 1 288 8.4E-98 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS05680 10f9036d5dcf88af77f80a4a0868fc94 288 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 220 4.2E-55 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS05680 10f9036d5dcf88af77f80a4a0868fc94 288 PANTHER PTHR33545:SF5 1 283 3.6E-75 T 22-04-2016 LMES_RS05680 10f9036d5dcf88af77f80a4a0868fc94 288 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 226 281 1.3E-15 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 LMES_RS05680 10f9036d5dcf88af77f80a4a0868fc94 288 PANTHER PTHR33545 1 283 3.6E-75 T 22-04-2016 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00959 Mevalonate kinase family signature 164 183 2.7E-41 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00959 Mevalonate kinase family signature 26 50 2.7E-41 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00959 Mevalonate kinase family signature 335 352 2.7E-41 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00959 Mevalonate kinase family signature 121 143 2.7E-41 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PIRSF PIRSF000530 1 389 3.2E-118 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 TIGRFAM TIGR00131 gal_kin: galactokinase 6 386 1.8E-116 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PANTHER PTHR10457:SF6 6 391 1.0E-122 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 Gene3D G3DSA:3.30.70.890 212 378 6.0E-59 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 Pfam PF00288 GHMP kinases N terminal domain 117 183 4.0E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 Pfam PF08544 GHMP kinases C terminal 286 368 6.7E-16 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 Gene3D G3DSA:3.30.230.10 4 211 4.6E-69 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 SUPERFAMILY SSF54211 2 205 5.39E-60 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PANTHER PTHR10457 6 391 1.0E-122 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 SUPERFAMILY SSF55060 207 388 2.88E-55 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 123 134 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00473 Galactokinase signature 93 104 6.0E-26 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00473 Galactokinase signature 271 285 6.0E-26 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00473 Galactokinase signature 114 132 6.0E-26 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 PRINTS PR00473 Galactokinase signature 28 46 6.0E-26 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 Hamap MF_00246 Galactokinase [galK]. 26 388 46.214 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS04235 327678ce0d2931bd33222c9b1ff2ae87 394 Pfam PF10509 Galactokinase galactose-binding signature 12 58 2.0E-19 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS08275 7a328a741d3afeb23d69c6d327142a04 466 PIRSF PIRSF006060 9 465 3.0E-85 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08275 7a328a741d3afeb23d69c6d327142a04 466 Pfam PF13520 Amino acid permease 27 434 1.2E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08275 7a328a741d3afeb23d69c6d327142a04 466 PANTHER PTHR11785:SF342 5 464 6.7E-124 T 22-04-2016 LMES_RS08275 7a328a741d3afeb23d69c6d327142a04 466 PANTHER PTHR11785 5 464 6.7E-124 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 PANTHER PTHR24220 5 235 6.7E-104 T 22-04-2016 LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 Gene3D G3DSA:3.40.50.300 2 224 4.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 Pfam PF00005 ABC transporter 23 171 2.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 Pfam PF12704 MacB-like periplasmic core domain 265 503 1.9E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 PANTHER PTHR24220:SF86 5 235 6.7E-104 T 22-04-2016 LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 SMART SM00382 32 226 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 SUPERFAMILY SSF52540 4 235 3.19E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01550 36ef09b42b3780cb9682d7c82400f841 662 Pfam PF02687 FtsX-like permease family 538 654 9.6E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LMES_RS01035 ce0e2e3eb0dd7388e62bb451050f73cd 332 SUPERFAMILY SSF48576 6 331 1.92E-70 T 22-04-2016 IPR008949 Isoprenoid synthase domain LMES_RS01035 ce0e2e3eb0dd7388e62bb451050f73cd 332 Gene3D G3DSA:1.10.600.10 13 331 8.1E-75 T 22-04-2016 IPR008949 Isoprenoid synthase domain LMES_RS01035 ce0e2e3eb0dd7388e62bb451050f73cd 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 101 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LMES_RS01035 ce0e2e3eb0dd7388e62bb451050f73cd 332 PANTHER PTHR12001 49 332 9.7E-69 T 22-04-2016 IPR017446 Polyprenyl synthetase-related LMES_RS01035 ce0e2e3eb0dd7388e62bb451050f73cd 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LMES_RS01035 ce0e2e3eb0dd7388e62bb451050f73cd 332 Pfam PF00348 Polyprenyl synthetase 38 271 3.0E-56 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Pfam PF05697 Bacterial trigger factor protein (TF) 10 146 7.1E-34 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 PANTHER PTHR30560:SF3 10 429 4.3E-103 T 22-04-2016 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 PANTHER PTHR30560 10 429 4.3E-103 T 22-04-2016 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 SUPERFAMILY SSF102735 9 128 1.44E-28 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 SUPERFAMILY SSF109998 252 429 3.79E-36 T 22-04-2016 IPR027304 Trigger factor/SurA domain LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Hamap MF_00303 Trigger factor [tig]. 2 431 20.954 T 22-04-2016 IPR005215 Trigger factor GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Gene3D G3DSA:1.10.3120.10 220 404 1.2E-57 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 SUPERFAMILY SSF54534 90 245 8.64E-34 T 22-04-2016 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Gene3D G3DSA:3.10.50.40 155 219 3.7E-10 T 22-04-2016 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 241 8.9E-16 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Gene3D G3DSA:3.30.70.1050 9 120 1.2E-28 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 TIGRFAM TIGR00115 tig: trigger factor 13 422 2.4E-122 T 22-04-2016 IPR005215 Trigger factor GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 266 425 1.8E-36 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LMES_RS06770 544eed0c75714244f0e1c1bd5d82249a 431 PIRSF PIRSF003095 3 431 6.4E-116 T 22-04-2016 IPR005215 Trigger factor GO:0015031 LMES_RS06900 84793bbd7a7eeed264f38b11832da78e 132 SUPERFAMILY SSF141734 8 112 5.62E-45 T 22-04-2016 LMES_RS06900 84793bbd7a7eeed264f38b11832da78e 132 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 103 4.0E-17 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LMES_RS06900 84793bbd7a7eeed264f38b11832da78e 132 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 104 8.6E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LMES_RS06900 84793bbd7a7eeed264f38b11832da78e 132 PANTHER PTHR21256 7 107 6.1E-52 T 22-04-2016 LMES_RS02200 2df601a1dcaf12c12837f00254399906 313 Gene3D G3DSA:3.40.50.300 125 281 7.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02200 2df601a1dcaf12c12837f00254399906 313 SUPERFAMILY SSF52540 3 267 6.23E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02200 2df601a1dcaf12c12837f00254399906 313 PANTHER PTHR30258 3 265 1.2E-73 T 22-04-2016 LMES_RS02200 2df601a1dcaf12c12837f00254399906 313 Pfam PF00437 Type II/IV secretion system protein 11 261 1.6E-54 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LMES_RS02200 2df601a1dcaf12c12837f00254399906 313 PANTHER PTHR30258:SF2 3 265 1.2E-73 T 22-04-2016 LMES_RS02200 2df601a1dcaf12c12837f00254399906 313 Gene3D G3DSA:3.30.450.90 3 100 1.9E-20 T 22-04-2016 LMES_RS01435 be12a255d9e0de7b09b4f6f79414babd 148 SUPERFAMILY SSF54637 7 145 4.59E-42 T 22-04-2016 IPR029069 HotDog domain LMES_RS01435 be12a255d9e0de7b09b4f6f79414babd 148 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 143 31.805 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LMES_RS01435 be12a255d9e0de7b09b4f6f79414babd 148 Gene3D G3DSA:3.10.129.10 2 141 1.4E-49 T 22-04-2016 IPR029069 HotDog domain LMES_RS01435 be12a255d9e0de7b09b4f6f79414babd 148 Pfam PF07977 FabA-like domain 13 135 2.1E-30 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LMES_RS01435 be12a255d9e0de7b09b4f6f79414babd 148 PANTHER PTHR30272 1 145 5.6E-60 T 22-04-2016 LMES_RS01435 be12a255d9e0de7b09b4f6f79414babd 148 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 140 7.3E-52 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 138 1.2E-53 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.5E-26 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 SUPERFAMILY SSF46906 67 138 3.14E-22 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 139 29.385 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 Gene3D G3DSA:3.30.1550.10 2 71 9.6E-35 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 73 2.0E-11 T 22-04-2016 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 Gene3D G3DSA:1.10.10.250 72 138 9.8E-27 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 ProSitePatterns PS00359 Ribosomal protein L11 signature. 124 139 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 137 2.8E-20 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 SMART SM00649 9 138 3.0E-71 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 PANTHER PTHR11661:SF7 2 141 2.4E-59 T 22-04-2016 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 PANTHER PTHR11661 2 141 2.4E-59 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LMES_RS01245 41b363891166d1ae425ce34d9e1b508c 154 SUPERFAMILY SSF54747 3 72 2.88E-27 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Gene3D G3DSA:1.10.10.10 322 393 1.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Pfam PF03979 Sigma-70 factor, region 1.1 33 113 2.1E-13 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PANTHER PTHR30603 38 397 1.5E-204 T 22-04-2016 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 SUPERFAMILY SSF88659 233 307 3.36E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 32 393 34.222 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PANTHER PTHR30603:SF0 38 397 1.5E-204 T 22-04-2016 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Pfam PF04539 Sigma-70 region 3 239 315 1.1E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Pfam PF04545 Sigma-70, region 4 328 381 1.3E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PRINTS PR00046 Major sigma-70 factor signature 208 216 5.2E-32 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PRINTS PR00046 Major sigma-70 factor signature 353 368 5.2E-32 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PRINTS PR00046 Major sigma-70 factor signature 184 197 5.2E-32 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PRINTS PR00046 Major sigma-70 factor signature 368 379 5.2E-32 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 PRINTS PR00046 Major sigma-70 factor signature 332 344 5.2E-32 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Pfam PF00140 Sigma-70 factor, region 1.2 122 154 1.1E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Pfam PF04542 Sigma-70 region 2 160 229 6.3E-23 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 353 379 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 156 392 6.9E-124 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 156 381 4.6E-41 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 SUPERFAMILY SSF88946 121 230 2.88E-54 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Gene3D G3DSA:1.10.601.10 30 229 8.0E-75 T 22-04-2016 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 SUPERFAMILY SSF88659 290 392 4.11E-30 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 Gene3D G3DSA:1.10.10.10 233 284 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05480 debd4799a87093a0491cadb939a2b3ab 397 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 184 197 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS00945 cca060300437879713108839d94ede5f 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 1.1E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 1.1E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 1.1E-10 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 SUPERFAMILY SSF50249 8 85 1.07E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00945 cca060300437879713108839d94ede5f 88 Gene3D G3DSA:2.40.50.140 8 85 9.9E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00945 cca060300437879713108839d94ede5f 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 79 6.8E-34 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 Pfam PF00366 Ribosomal protein S17 13 80 1.4E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 79 7.0E-29 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 22.978 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 PANTHER PTHR10744 8 87 2.1E-39 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00945 cca060300437879713108839d94ede5f 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 59 71 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 Gene3D G3DSA:3.90.79.10 239 337 1.2E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 41 170 5.3E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 Pfam PF14815 NUDIX domain 244 335 2.3E-16 T 22-04-2016 IPR029119 MutY, C-terminal LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 SUPERFAMILY SSF55811 226 338 6.15E-15 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 PANTHER PTHR10359 5 282 3.6E-91 T 22-04-2016 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 12 275 4.8E-91 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 SUPERFAMILY SSF48150 9 228 3.61E-66 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 Gene3D G3DSA:1.10.1670.10 129 230 8.2E-31 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 Pfam PF00633 Helix-hairpin-helix motif 113 134 9.5E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 Gene3D G3DSA:1.10.340.30 28 128 4.4E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 PANTHER PTHR10359:SF1 5 282 3.6E-91 T 22-04-2016 LMES_RS08360 0f2f98f89a589513b65783aa546b3ae7 342 SMART SM00478 45 196 1.2E-45 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Pfam PF00009 Elongation factor Tu GTP binding domain 10 254 3.5E-48 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 503 47.715 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 SUPERFAMILY SSF52540 8 254 5.01E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 146 3.8E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PANTHER PTHR23115:SF69 228 445 9.2E-216 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PANTHER PTHR23115:SF69 1 182 9.2E-216 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PANTHER PTHR23115 228 445 9.2E-216 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PANTHER PTHR23115 1 182 9.2E-216 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 SUPERFAMILY SSF50447 239 367 4.78E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Pfam PF03144 Elongation factor Tu domain 2 292 358 4.3E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Pfam PF16658 Class II release factor RF3, C-terminal domain 366 490 6.3E-45 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 228 250 9.8E-6 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 121 144 9.8E-6 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Gene3D G3DSA:3.30.70.870 374 443 2.6E-11 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 SUPERFAMILY SSF54980 372 444 2.88E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Gene3D G3DSA:2.40.30.10 270 367 1.4E-25 T 22-04-2016 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 Gene3D G3DSA:3.40.50.300 5 258 3.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.2E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.2E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.2E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00630 3c9cb52c1325220ada8ec8642b56409a 503 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.2E-8 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 252 8.0E-106 T 22-04-2016 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 Gene3D G3DSA:3.40.50.720 3 250 4.0E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 SUPERFAMILY SSF51735 3 251 2.86E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 1.0E-55 T 22-04-2016 LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PANTHER PTHR24322 7 133 3.4E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PANTHER PTHR24322 149 181 3.4E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.4E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.7E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PANTHER PTHR24322:SF460 7 133 3.4E-51 T 22-04-2016 LMES_RS05045 a9562e0921db5ea9e223aab517e2aafb 253 PANTHER PTHR24322:SF460 149 181 3.4E-51 T 22-04-2016 LMES_RS00210 6a662c4357a1d350ed1cdc65679ad8d1 732 PANTHER PTHR10342 240 596 7.8E-112 T 22-04-2016 LMES_RS00210 6a662c4357a1d350ed1cdc65679ad8d1 732 PIRSF PIRSF005091 4 655 3.8E-200 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 LMES_RS00210 6a662c4357a1d350ed1cdc65679ad8d1 732 PANTHER PTHR10342:SF214 240 596 7.8E-112 T 22-04-2016 LMES_RS00210 6a662c4357a1d350ed1cdc65679ad8d1 732 Gene3D G3DSA:3.40.720.10 268 579 2.3E-34 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LMES_RS00210 6a662c4357a1d350ed1cdc65679ad8d1 732 SUPERFAMILY SSF53649 266 669 1.72E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LMES_RS00210 6a662c4357a1d350ed1cdc65679ad8d1 732 Pfam PF00884 Sulfatase 268 566 1.3E-35 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 PANTHER PTHR11014:SF16 3 195 2.1E-46 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 PANTHER PTHR11014:SF16 266 474 2.1E-46 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 SUPERFAMILY SSF55031 191 382 5.71E-47 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 Gene3D G3DSA:3.30.70.360 291 383 8.0E-32 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 Pfam PF01546 Peptidase family M20/M25/M40 89 472 1.8E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 SUPERFAMILY SSF53187 393 474 3.43E-58 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 SUPERFAMILY SSF53187 4 191 3.43E-58 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 PANTHER PTHR11014 3 195 2.1E-46 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 PANTHER PTHR11014 266 474 2.1E-46 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 Gene3D G3DSA:3.40.630.10 4 191 5.1E-57 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 Gene3D G3DSA:3.40.630.10 392 474 5.1E-57 T 22-04-2016 LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 Gene3D G3DSA:3.30.70.360 209 290 7.2E-21 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS08915 44fc7149dfc4fd5722d54ad744d4c371 476 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 470 2.5E-124 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- LMES_RS03605 34feddcd9523a296505bfb14f922a6d3 384 Gene3D G3DSA:3.60.120.10 95 374 1.1E-72 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LMES_RS03605 34feddcd9523a296505bfb14f922a6d3 384 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 95 373 1.1E-86 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 LMES_RS03605 34feddcd9523a296505bfb14f922a6d3 384 PANTHER PTHR11236 112 375 2.5E-86 T 22-04-2016 LMES_RS03605 34feddcd9523a296505bfb14f922a6d3 384 PANTHER PTHR11236:SF3 112 375 2.5E-86 T 22-04-2016 LMES_RS03605 34feddcd9523a296505bfb14f922a6d3 384 SUPERFAMILY SSF56322 44 374 2.22E-80 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LMES_RS03605 34feddcd9523a296505bfb14f922a6d3 384 Pfam PF00425 chorismate binding enzyme 112 365 4.9E-68 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LMES_RS02755 0316e0c5f4d4e9df7ce9936c6476e6ad 285 PANTHER PTHR34138 1 281 1.7E-53 T 22-04-2016 LMES_RS02755 0316e0c5f4d4e9df7ce9936c6476e6ad 285 PIRSF PIRSF038471 1 284 3.3E-70 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LMES_RS02755 0316e0c5f4d4e9df7ce9936c6476e6ad 285 PANTHER PTHR34138:SF1 1 281 1.7E-53 T 22-04-2016 LMES_RS02755 0316e0c5f4d4e9df7ce9936c6476e6ad 285 Pfam PF04085 rod shape-determining protein MreC 127 277 6.5E-41 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LMES_RS02755 0316e0c5f4d4e9df7ce9936c6476e6ad 285 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 57 278 1.3E-44 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 331 2.6E-117 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 Gene3D G3DSA:3.30.360.10 164 321 3.9E-55 T 22-04-2016 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 1.0E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 1.0E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.0E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 1.0E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 1.0E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PANTHER PTHR10836:SF57 1 337 2.4E-159 T 22-04-2016 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 Gene3D G3DSA:3.40.50.720 2 163 7.7E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 319 3.8E-49 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 SUPERFAMILY SSF55347 155 320 1.68E-51 T 22-04-2016 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 1.7E-51 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 SMART SM00846 3 155 3.1E-84 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PIRSF PIRSF000149 1 339 6.5E-108 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 PANTHER PTHR10836 1 337 2.4E-159 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LMES_RS01425 97d2bf8a51b0d29d9839f7f5756a2531 339 SUPERFAMILY SSF51735 1 176 5.14E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Pfam PF00476 DNA polymerase family A 514 891 5.2E-152 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SUPERFAMILY SSF47807 178 294 7.92E-33 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 ProSitePatterns PS00447 DNA polymerase family A signature. 719 738 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SMART SM00475 4 269 9.1E-114 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SMART SM00279 180 215 5.9E-14 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 TIGRFAM TIGR00593 pola: DNA polymerase I 6 893 0.0 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:1.20.1060.10 507 625 8.3E-40 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SUPERFAMILY SSF56672 486 893 4.45E-153 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:1.10.150.20 676 783 3.8E-35 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:3.30.420.10 326 506 4.5E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 179 272 1.5E-29 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 177 8.1E-44 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 778 789 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 840 853 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 810 826 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 719 744 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 707 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 618 640 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 641 656 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 767 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PRINTS PR00868 DNA-polymerase family A (pol I) signature 664 687 5.6E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SMART SM00482 649 857 9.1E-109 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:1.10.150.20 193 253 2.1E-26 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PANTHER PTHR10133 1 893 0.0 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:3.30.70.370 626 675 4.2E-66 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:3.30.70.370 784 893 4.2E-66 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 Gene3D G3DSA:3.40.50.1010 4 192 1.1E-57 T 22-04-2016 IPR029060 PIN domain-like LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SUPERFAMILY SSF53098 327 483 1.47E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 PANTHER PTHR10133:SF27 1 893 0.0 T 22-04-2016 LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SUPERFAMILY SSF88723 4 177 1.4E-44 T 22-04-2016 IPR029060 PIN domain-like LMES_RS03425 0606fc242dfd529dfb340d20d2777171 893 SMART SM00474 308 482 2.0E-7 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LMES_RS04790 e5a46409108da42d4c212f692125f4a0 222 PANTHER PTHR20858 1 180 4.5E-52 T 22-04-2016 LMES_RS04790 e5a46409108da42d4c212f692125f4a0 222 Gene3D G3DSA:1.20.910.10 2 219 4.7E-76 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LMES_RS04790 e5a46409108da42d4c212f692125f4a0 222 Pfam PF03070 TENA/THI-4/PQQC family 11 215 1.3E-50 T 22-04-2016 IPR004305 Thiaminase-2/PQQC LMES_RS04790 e5a46409108da42d4c212f692125f4a0 222 SUPERFAMILY SSF48613 1 214 8.46E-70 T 22-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LMES_RS04790 e5a46409108da42d4c212f692125f4a0 222 PIRSF PIRSF003170 1 218 1.6E-29 T 22-04-2016 IPR026285 TenA_E protein LMES_RS04790 e5a46409108da42d4c212f692125f4a0 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 13 215 3.3E-58 T 22-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PANTHER PTHR11731 265 403 4.2E-59 T 22-04-2016 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PANTHER PTHR11731 440 538 4.2E-59 T 22-04-2016 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PANTHER PTHR11731 165 210 4.2E-59 T 22-04-2016 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 SUPERFAMILY SSF81761 2 142 2.75E-34 T 22-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 SUPERFAMILY SSF53474 146 557 2.83E-93 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 184 193 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 511 527 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 738 753 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 198 214 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 150 162 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 375 391 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 166 176 7.8E-39 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 2 141 2.4E-38 T 22-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 537 767 2.0E-29 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PANTHER PTHR11731:SF148 265 403 4.2E-59 T 22-04-2016 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PANTHER PTHR11731:SF148 440 538 4.2E-59 T 22-04-2016 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 PANTHER PTHR11731:SF148 165 210 4.2E-59 T 22-04-2016 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Gene3D G3DSA:2.60.120.260 548 655 1.8E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Gene3D G3DSA:2.60.120.260 693 773 1.8E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 180 505 9.2E-71 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 SMART SM00939 519 770 5.3E-52 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 SMART SM00940 1 141 1.0E-61 T 22-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 SUPERFAMILY SSF49785 568 773 8.29E-66 T 22-04-2016 IPR008979 Galactose-binding domain-like LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Gene3D G3DSA:3.40.50.1820 459 547 2.9E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Gene3D G3DSA:3.40.50.1820 160 211 2.9E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02420 29efd4c34124c400c674a1e61fd5c9b0 777 Gene3D G3DSA:3.40.50.1820 271 385 2.9E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS00390 bd3958a2bd80d1ba5a030df0ac1ca206 195 SMART SM00530 17 72 1.3E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00390 bd3958a2bd80d1ba5a030df0ac1ca206 195 SUPERFAMILY SSF47413 12 73 1.13E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00390 bd3958a2bd80d1ba5a030df0ac1ca206 195 Pfam PF01381 Helix-turn-helix 18 72 4.0E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00390 bd3958a2bd80d1ba5a030df0ac1ca206 195 Gene3D G3DSA:1.10.260.40 12 73 2.5E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08710 7b45c0f99600fda6dc1b82bd0e9f9bf4 341 SUPERFAMILY SSF161098 133 319 4.84E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08710 7b45c0f99600fda6dc1b82bd0e9f9bf4 341 PANTHER PTHR30465:SF75 21 340 2.8E-114 T 22-04-2016 LMES_RS08710 7b45c0f99600fda6dc1b82bd0e9f9bf4 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 85 1.8E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LMES_RS08710 7b45c0f99600fda6dc1b82bd0e9f9bf4 341 PANTHER PTHR30465 21 340 2.8E-114 T 22-04-2016 LMES_RS08710 7b45c0f99600fda6dc1b82bd0e9f9bf4 341 Gene3D G3DSA:1.10.3720.10 133 336 5.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08710 7b45c0f99600fda6dc1b82bd0e9f9bf4 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 156 338 4.3E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08550 437f1f7fed0e89c6412655479abacde1 182 PANTHER PTHR13256:SF39 1 174 4.4E-40 T 22-04-2016 LMES_RS08550 437f1f7fed0e89c6412655479abacde1 182 Pfam PF13420 Acetyltransferase (GNAT) domain 38 163 3.4E-13 T 22-04-2016 LMES_RS08550 437f1f7fed0e89c6412655479abacde1 182 PANTHER PTHR13256 1 174 4.4E-40 T 22-04-2016 LMES_RS08550 437f1f7fed0e89c6412655479abacde1 182 Gene3D G3DSA:3.40.630.30 4 174 1.5E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08550 437f1f7fed0e89c6412655479abacde1 182 SUPERFAMILY SSF55729 2 169 1.12E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 32 56 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 133 159 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 2.2E-92 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 Pfam PF00815 Histidinol dehydrogenase 22 423 5.4E-170 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 Gene3D G3DSA:3.40.50.1980 221 370 1.3E-66 T 22-04-2016 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 SUPERFAMILY SSF53720 23 423 1.26E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PIRSF PIRSF000099 2 425 6.8E-168 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 424 42.711 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 PANTHER PTHR21256 1 425 6.0E-204 T 22-04-2016 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 Gene3D G3DSA:3.40.50.1980 27 220 2.9E-85 T 22-04-2016 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS06925 d87066e6b6bb7c064c261f80c78a12e4 425 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 32 423 6.9E-169 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LMES_RS04930 39f8ee303127bd6ef393dd406c7d42b8 132 SUPERFAMILY SSF54427 5 113 4.62E-7 T 22-04-2016 IPR032710 NTF2-like domain LMES_RS04930 39f8ee303127bd6ef393dd406c7d42b8 132 Gene3D G3DSA:3.40.390.10 5 116 3.3E-4 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LMES_RS06395 12c6bf40715c294dc49818a3d7831353 252 Pfam PF13649 Methyltransferase domain 43 137 2.2E-16 T 22-04-2016 LMES_RS06395 12c6bf40715c294dc49818a3d7831353 252 SUPERFAMILY SSF53335 11 214 8.91E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06395 12c6bf40715c294dc49818a3d7831353 252 Gene3D G3DSA:3.40.50.150 12 223 8.1E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06395 12c6bf40715c294dc49818a3d7831353 252 PANTHER PTHR10108 28 164 7.4E-20 T 22-04-2016 LMES_RS06395 12c6bf40715c294dc49818a3d7831353 252 PANTHER PTHR10108 184 211 7.4E-20 T 22-04-2016 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 Gene3D G3DSA:3.90.226.10 11 196 5.2E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 PANTHER PTHR10381 3 196 1.1E-98 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 37.693 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 88 99 - T 22-04-2016 IPR018215 ClpP, Ser active site LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 2.6E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 2.6E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 2.6E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 2.6E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 2.6E-40 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 SUPERFAMILY SSF52096 10 193 8.84E-63 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 Pfam PF00574 Clp protease 12 192 3.9E-72 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LMES_RS01875 7dde6736b0f054fc3980ba2581738773 200 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 22-04-2016 IPR033135 ClpP, histidine active site LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 PANTHER PTHR11712 1 416 9.1E-165 T 22-04-2016 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 SUPERFAMILY SSF53901 1 257 4.1E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 PIRSF PIRSF000447 1 418 1.3E-156 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 Gene3D G3DSA:3.40.47.10 2 262 8.0E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 161 177 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 Gene3D G3DSA:3.40.47.10 268 417 1.3E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 414 1.4E-167 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 SUPERFAMILY SSF53901 220 416 4.48E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 260 372 1.9E-32 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 SMART SM00825 Beta-ketoacyl synthase 4 418 1.4E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LMES_RS01470 68f40704cfa6f3c84c9b488ac9d0d56f 420 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 252 4.5E-53 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LMES_RS01055 d30aae8efcb331df2be0f642c9c637b9 267 Pfam PF02361 Cobalt transport protein 13 235 3.5E-45 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component LMES_RS01055 d30aae8efcb331df2be0f642c9c637b9 267 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 34.379 T 22-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 LMES_RS01055 d30aae8efcb331df2be0f642c9c637b9 267 PANTHER PTHR33514:SF2 1 266 1.4E-103 T 22-04-2016 LMES_RS01055 d30aae8efcb331df2be0f642c9c637b9 267 PANTHER PTHR33514 1 266 1.4E-103 T 22-04-2016 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 Gene3D G3DSA:1.10.10.60 249 297 2.2E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 SUPERFAMILY SSF51182 23 99 1.87E-10 T 22-04-2016 IPR011051 RmlC-like cupin domain LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 PANTHER PTHR11019 35 146 8.7E-25 T 22-04-2016 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 PANTHER PTHR11019 193 298 8.7E-25 T 22-04-2016 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 248 290 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 SMART SM00342 211 294 1.4E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 SUPERFAMILY SSF46689 248 297 1.48E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 Gene3D G3DSA:1.10.10.60 206 248 6.1E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 Pfam PF02311 AraC-like ligand binding domain 34 150 2.5E-10 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 Gene3D G3DSA:2.60.120.280 13 111 3.7E-11 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS04065 e0dd6b081617b3118fb1da36a8688e22 298 Pfam PF12833 Helix-turn-helix domain 221 295 5.3E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 SUPERFAMILY SSF52540 474 714 3.08E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 Pfam PF03412 Peptidase C39 family 3 140 3.1E-45 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 Gene3D G3DSA:1.20.1560.10 155 459 1.3E-75 T 22-04-2016 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 Pfam PF00664 ABC transporter transmembrane region 168 436 1.1E-59 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 SUPERFAMILY SSF90123 155 459 1.44E-64 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 9 714 0.0 T 22-04-2016 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 KEGG: 00900+3.4.22.- LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 Gene3D G3DSA:3.40.50.300 482 711 4.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 Gene3D G3DSA:3.90.70.10 11 139 6.4E-19 T 22-04-2016 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 PANTHER PTHR24221 136 714 1.3E-159 T 22-04-2016 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 SMART SM00382 507 708 4.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 Pfam PF00005 ABC transporter 498 647 1.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00405 e4722a32b17126b9ebc13c13cc9692ea 715 ProSitePatterns PS00211 ABC transporters family signature. 619 633 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 PANTHER PTHR21085 1 392 1.1E-156 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 Gene3D G3DSA:3.60.150.10 1 391 1.2E-133 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 TIGRFAM TIGR00033 aroC: chorismate synthase 1 371 2.6E-114 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 ProSitePatterns PS00788 Chorismate synthase signature 2. 130 146 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 Hamap MF_00300 Chorismate synthase [aroC]. 1 374 32.789 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 Pfam PF01264 Chorismate synthase 1 367 6.7E-109 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 PANTHER PTHR21085:SF0 1 392 1.1E-156 T 22-04-2016 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 SUPERFAMILY SSF103263 1 391 1.19E-131 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05105 33c8cb70e69498e913576b6b26ce7a48 392 PIRSF PIRSF001456 1 384 9.9E-115 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Gene3D G3DSA:3.40.50.300 234 434 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Gene3D G3DSA:1.10.150.20 8 36 2.0E-4 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031:SF249 170 264 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031:SF249 604 650 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031:SF249 28 61 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031:SF249 281 581 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Pfam PF17191 RecG wedge domain 10 156 7.5E-14 T 22-04-2016 IPR033454 RecG, wedge domain LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 SUPERFAMILY SSF50249 3 157 1.35E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 SMART SM00487 247 438 1.2E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Pfam PF00271 Helicase conserved C-terminal domain 452 567 5.3E-19 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Pfam PF00270 DEAD/DEAH box helicase 254 411 3.5E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 SMART SM00490 484 568 3.8E-22 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 SUPERFAMILY SSF52540 170 432 2.67E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 SUPERFAMILY SSF52540 372 581 6.63E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 643 2.0E-223 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Gene3D G3DSA:3.40.50.300 435 616 3.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031 170 264 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031 604 650 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031 28 61 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 PANTHER PTHR24031 281 581 1.9E-116 T 22-04-2016 LMES_RS02570 2a3695541cc7319b4607b0f1146735f6 676 Gene3D G3DSA:2.40.50.140 51 118 9.6E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 SUPERFAMILY SSF47413 3 59 2.04E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 4.3E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 SUPERFAMILY SSF53822 62 312 5.68E-30 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 SMART SM00354 4 73 2.0E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 Gene3D G3DSA:3.40.50.2300 160 320 3.5E-13 T 22-04-2016 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 Gene3D G3DSA:3.40.50.2300 56 159 1.1E-23 T 22-04-2016 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 Gene3D G3DSA:1.10.260.40 6 55 2.6E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 PANTHER PTHR30146 4 320 6.4E-49 T 22-04-2016 LMES_RS01335 2e509fbfc339501d1ade99ad39ab4da3 321 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 259 5.2E-8 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 2 330 25.312 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 Gene3D G3DSA:3.30.450.40 178 339 2.1E-30 T 22-04-2016 IPR029016 GAF domain-like LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 PANTHER PTHR34824 1 340 4.1E-73 T 22-04-2016 LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 4 335 7.6E-82 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 SUPERFAMILY SSF55781 72 338 1.53E-53 T 22-04-2016 IPR029016 GAF domain-like LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 3 60 1.3E-5 T 22-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 Pfam PF01628 HrcA protein C terminal domain 105 320 9.4E-43 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 SUPERFAMILY SSF46785 3 80 1.09E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 PIRSF PIRSF005485 1 340 3.9E-84 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 LMES_RS05865 7a7d7dfad6f5209ba690da6a8b13a8ef 341 Gene3D G3DSA:1.10.10.10 2 83 2.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 414 1.0E-154 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 PANTHER PTHR11476:SF9 6 430 3.0E-200 T 22-04-2016 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 Gene3D G3DSA:3.30.930.10 5 188 1.5E-96 T 22-04-2016 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 Gene3D G3DSA:3.30.930.10 224 327 1.5E-96 T 22-04-2016 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 PIRSF PIRSF001549 3 423 2.6E-122 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 SUPERFAMILY SSF52954 333 422 1.8E-22 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 Pfam PF03129 Anticodon binding domain 336 420 7.7E-13 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 Pfam PF13393 Histidyl-tRNA synthetase 11 317 5.7E-42 T 22-04-2016 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 SUPERFAMILY SSF55681 5 325 1.91E-98 T 22-04-2016 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 Gene3D G3DSA:3.40.50.800 330 422 1.4E-25 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 427 33.21 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 LMES_RS05690 e14a2c9cadae9b9de90426324f01cdc0 433 PANTHER PTHR11476 6 430 3.0E-200 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 SUPERFAMILY SSF52954 463 567 2.11E-27 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.6E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.6E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.6E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.6E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Gene3D G3DSA:3.30.930.10 388 469 4.7E-93 T 22-04-2016 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Gene3D G3DSA:3.30.930.10 12 234 4.7E-93 T 22-04-2016 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 SUPERFAMILY SSF55681 10 237 7.19E-95 T 22-04-2016 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 SUPERFAMILY SSF55681 406 477 7.19E-95 T 22-04-2016 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 457 2.1E-56 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 372 2.3E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PANTHER PTHR11451 398 568 3.7E-139 T 22-04-2016 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PANTHER PTHR11451 4 244 3.7E-139 T 22-04-2016 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 561 1.2E-213 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Gene3D G3DSA:3.40.50.800 470 568 3.5E-27 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 SUPERFAMILY SSF55826 218 376 9.29E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PANTHER PTHR11451:SF3 398 568 3.7E-139 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 PANTHER PTHR11451:SF3 4 244 3.7E-139 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 38.996 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Pfam PF03129 Anticodon binding domain 475 563 1.3E-17 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS03305 4087d45f7105664a41c4ddc39a9f1cd0 572 Gene3D G3DSA:3.90.960.10 255 376 1.6E-29 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 448 5.4E-137 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 PANTHER PTHR13710:SF81 7 601 1.6E-238 T 22-04-2016 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Gene3D G3DSA:1.10.150.80 527 599 3.3E-22 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 597 1.5E-228 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SMART SM00341 526 602 5.5E-12 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SMART SM00490 244 325 4.4E-30 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Pfam PF09382 RQC domain 402 510 9.1E-31 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SMART SM00487 15 212 4.6E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Gene3D G3DSA:1.10.10.10 339 509 2.3E-51 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SUPERFAMILY SSF46785 397 514 4.76E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Pfam PF00271 Helicase conserved C-terminal domain 217 325 1.5E-20 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SUPERFAMILY SSF47819 527 600 3.92E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Pfam PF16124 RecQ zinc-binding 336 399 2.6E-16 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 PANTHER PTHR13710 7 601 1.6E-238 T 22-04-2016 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SMART SM00956 406 510 1.4E-37 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Gene3D G3DSA:3.40.50.300 202 338 5.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Pfam PF00270 DEAD/DEAH box helicase 22 182 4.1E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Gene3D G3DSA:3.40.50.300 8 193 2.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 Pfam PF00570 HRDC domain 530 596 9.0E-19 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LMES_RS08940 28ff7eb199afdb9d8b8406c84641426a 602 SUPERFAMILY SSF52540 59 347 2.76E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 SUPERFAMILY SSF51735 103 300 6.89E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 Gene3D G3DSA:3.40.50.720 143 305 4.5E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 PANTHER PTHR10996:SF161 1 330 2.4E-105 T 22-04-2016 LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 PANTHER PTHR10996 1 330 2.4E-105 T 22-04-2016 LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 329 2.1E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 Gene3D G3DSA:3.40.50.720 1 142 2.5E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 SUPERFAMILY SSF52283 2 135 7.94E-35 T 22-04-2016 LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 298 6.2E-50 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LMES_RS07860 92ba775532ca6d5c23ea2fbcf3cd8ff5 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 242 2.9E-109 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 PANTHER PTHR24220 5 251 8.3E-129 T 22-04-2016 LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 Gene3D G3DSA:3.40.50.300 3 233 4.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 SMART SM00382 28 225 0.0012 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 Pfam PF00005 ABC transporter 19 171 2.1E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 PANTHER PTHR24220:SF85 5 251 8.3E-129 T 22-04-2016 LMES_RS09240 97d4ae0c8c9235abd43d96cd065724d2 266 SUPERFAMILY SSF52540 3 231 4.75E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03830 8b0d0d63164946e8cb01baef2de3bc75 407 PANTHER PTHR10590 6 407 6.1E-165 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 LMES_RS03830 8b0d0d63164946e8cb01baef2de3bc75 407 PANTHER PTHR10590:SF19 6 407 6.1E-165 T 22-04-2016 LMES_RS03830 8b0d0d63164946e8cb01baef2de3bc75 407 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 405 2.4E-52 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 LMES_RS03830 8b0d0d63164946e8cb01baef2de3bc75 407 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 77 6.5E-19 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 SUPERFAMILY SSF56601 203 587 1.35E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 PANTHER PTHR30627 6 612 1.5E-144 T 22-04-2016 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 Pfam PF03793 PASTA domain 598 650 2.4E-7 T 22-04-2016 IPR005543 PASTA domain LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 Gene3D G3DSA:3.90.1310.10 150 250 2.7E-25 T 22-04-2016 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 SUPERFAMILY SSF56519 65 243 1.05E-38 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 SMART SM00740 652 710 0.0016 T 22-04-2016 IPR005543 PASTA domain LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 SMART SM00740 593 651 1.4E-7 T 22-04-2016 IPR005543 PASTA domain LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 Pfam PF03717 Penicillin-binding Protein dimerisation domain 68 228 1.4E-21 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 SUPERFAMILY SSF54184 594 650 1.96E-11 T 22-04-2016 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 PANTHER PTHR30627:SF1 6 612 1.5E-144 T 22-04-2016 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 SUPERFAMILY SSF54184 655 709 5.36E-11 T 22-04-2016 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 Pfam PF00905 Penicillin binding protein transpeptidase domain 270 560 1.3E-70 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LMES_RS06625 b92bb1c18c33f830d92df29b4e8bbafc 712 Gene3D G3DSA:3.40.710.10 251 585 1.8E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS07065 82fa106bc0409eefd5b043ab17539fcb 102 PANTHER PTHR15004 6 102 2.2E-24 T 22-04-2016 LMES_RS07065 82fa106bc0409eefd5b043ab17539fcb 102 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 6 97 7.5E-24 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LMES_RS07065 82fa106bc0409eefd5b043ab17539fcb 102 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 5 98 21.1 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LMES_RS07065 82fa106bc0409eefd5b043ab17539fcb 102 SUPERFAMILY SSF141000 6 96 1.57E-26 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LMES_RS07065 82fa106bc0409eefd5b043ab17539fcb 102 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 22 93 7.1E-16 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LMES_RS07065 82fa106bc0409eefd5b043ab17539fcb 102 PANTHER PTHR15004:SF0 6 102 2.2E-24 T 22-04-2016 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PRINTS PR00108 Thymidylate synthase family signature 173 192 8.5E-46 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PRINTS PR00108 Thymidylate synthase family signature 199 214 8.5E-46 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PRINTS PR00108 Thymidylate synthase family signature 46 67 8.5E-46 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PRINTS PR00108 Thymidylate synthase family signature 217 243 8.5E-46 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PRINTS PR00108 Thymidylate synthase family signature 255 272 8.5E-46 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 SUPERFAMILY SSF55831 5 322 1.83E-125 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PANTHER PTHR11548 5 103 5.4E-151 T 22-04-2016 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 PANTHER PTHR11548 142 322 5.4E-151 T 22-04-2016 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 Gene3D G3DSA:3.30.572.10 137 322 1.6E-120 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 Gene3D G3DSA:3.30.572.10 2 98 1.6E-120 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 Hamap MF_00008 Thymidylate synthase [thyA]. 5 322 43.359 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 6 322 5.9E-141 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS02185 0e4c2c632195654839f5e64467de1176 322 Pfam PF00303 Thymidylate synthase 6 322 1.9E-108 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 SUPERFAMILY SSF51366 13 259 3.06E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 PANTHER PTHR22854:SF2 2 258 1.1E-83 T 22-04-2016 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 70 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 260 33.29 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 Gene3D G3DSA:3.20.20.70 1 260 2.2E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 258 4.1E-83 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LMES_RS05150 a59539cef870e4e6e908567bde66e02a 262 PANTHER PTHR22854 2 258 1.1E-83 T 22-04-2016 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PIRSF PIRSF000110 1 485 5.5E-173 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 484 82.869 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 188 1.5E-56 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 Gene3D G3DSA:3.30.360.10 188 483 6.3E-101 T 22-04-2016 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PANTHER PTHR23429 12 482 1.8E-169 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 SUPERFAMILY SSF55347 183 484 9.48E-97 T 22-04-2016 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 3.86E-42 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 3.86E-42 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 3.86E-42 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 3.86E-42 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 3.86E-42 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 SUPERFAMILY SSF51735 4 187 8.66E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 Gene3D G3DSA:3.40.50.720 8 187 1.2E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 PANTHER PTHR23429:SF0 12 482 1.8E-169 T 22-04-2016 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 482 9.3E-158 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS09130 b5a8b4d22237d02d5202a404ab2fe9af 486 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 482 1.6E-91 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LMES_RS01445 eb7007445568f908230d7472de421919 323 PANTHER PTHR34069:SF2 1 323 1.0E-108 T 22-04-2016 LMES_RS01445 eb7007445568f908230d7472de421919 323 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 321 4.6E-94 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01445 eb7007445568f908230d7472de421919 323 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 181 1.1E-26 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01445 eb7007445568f908230d7472de421919 323 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 323 62.411 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01445 eb7007445568f908230d7472de421919 323 SUPERFAMILY SSF53901 4 322 7.09E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01445 eb7007445568f908230d7472de421919 323 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 8.6E-29 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01445 eb7007445568f908230d7472de421919 323 Gene3D G3DSA:3.40.47.10 160 322 6.1E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01445 eb7007445568f908230d7472de421919 323 PANTHER PTHR34069 1 323 1.0E-108 T 22-04-2016 LMES_RS01445 eb7007445568f908230d7472de421919 323 Gene3D G3DSA:3.40.47.10 1 159 7.0E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 10 256 2.4E-112 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 PANTHER PTHR24220 11 254 2.0E-123 T 22-04-2016 LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 Gene3D G3DSA:3.40.50.300 8 251 2.9E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 PANTHER PTHR24220:SF585 11 254 2.0E-123 T 22-04-2016 LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 SMART SM00382 34 228 2.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 Pfam PF00005 ABC transporter 25 181 2.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02845 a3693eaea4116d5986007dd0f2a2c430 256 SUPERFAMILY SSF52540 8 241 3.03E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 Gene3D G3DSA:3.30.470.20 105 230 1.7E-43 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 Pfam PF01259 SAICAR synthetase 18 242 3.3E-51 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 PANTHER PTHR11609:SF2 14 244 2.0E-83 T 22-04-2016 LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 15 246 24.625 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 Gene3D G3DSA:3.30.200.20 19 104 1.6E-29 T 22-04-2016 LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 PANTHER PTHR11609 14 244 2.0E-83 T 22-04-2016 LMES_RS03460 e677709ebc1f7f02b2c3da47baadf3ba 249 SUPERFAMILY SSF56104 12 246 7.52E-68 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 SUPERFAMILY SSF51905 1 354 5.76E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 351 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 251 265 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 300 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 165 190 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 408 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 435 2.2E-43 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PANTHER PTHR22912 1 444 3.4E-101 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 434 3.4E-13 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 312 1.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 SUPERFAMILY SSF55424 331 442 1.89E-21 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 Gene3D G3DSA:3.50.50.60 2 131 4.7E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 4.1E-25 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 266 4.1E-25 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 4.1E-25 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 4.1E-25 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 4.1E-25 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 Gene3D G3DSA:3.50.50.60 132 324 7.0E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 Gene3D G3DSA:3.30.390.30 328 436 7.5E-19 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PANTHER PTHR22912:SF157 1 444 3.4E-101 T 22-04-2016 LMES_RS04575 c13ccf5eb7860961835b13c0f298e511 446 PIRSF PIRSF000350 1 438 3.5E-60 T 22-04-2016 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Gene3D G3DSA:3.40.50.300 3 209 5.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 603 3.0E-273 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 SUPERFAMILY SSF52540 4 211 6.58E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Gene3D G3DSA:3.30.70.870 307 403 5.7E-37 T 22-04-2016 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Gene3D G3DSA:3.30.70.240 404 482 3.0E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Gene3D G3DSA:2.40.50.250 487 581 6.1E-35 T 22-04-2016 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Gene3D G3DSA:2.40.30.10 210 306 4.0E-25 T 22-04-2016 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PANTHER PTHR23115:SF14 3 595 8.0E-269 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 145 6.0E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 SUPERFAMILY SSF54980 306 391 1.04E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 SMART SM00838 402 487 2.1E-5 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.9E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Pfam PF00009 Elongation factor Tu GTP binding domain 6 200 3.1E-53 T 22-04-2016 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Pfam PF00679 Elongation factor G C-terminus 402 479 5.8E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 PANTHER PTHR23115 3 595 8.0E-269 T 22-04-2016 LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 SUPERFAMILY SSF50447 154 303 1.21E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 SUPERFAMILY SSF54980 402 516 2.88E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS05830 1e2430d80ea36edfbc392c6fd5b41771 613 Pfam PF03144 Elongation factor Tu domain 2 223 292 7.5E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LMES_RS03395 921fe67ae76f33e3995535d5931b6cf6 224 Pfam PF01048 Phosphorylase superfamily 2 218 1.8E-38 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LMES_RS03395 921fe67ae76f33e3995535d5931b6cf6 224 Gene3D G3DSA:3.40.50.1580 1 222 1.1E-68 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LMES_RS03395 921fe67ae76f33e3995535d5931b6cf6 224 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 218 4.2E-61 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 LMES_RS03395 921fe67ae76f33e3995535d5931b6cf6 224 PANTHER PTHR21234:SF16 1 222 2.0E-46 T 22-04-2016 LMES_RS03395 921fe67ae76f33e3995535d5931b6cf6 224 PANTHER PTHR21234 1 222 2.0E-46 T 22-04-2016 IPR018017 Nucleoside phosphorylase LMES_RS03395 921fe67ae76f33e3995535d5931b6cf6 224 SUPERFAMILY SSF53167 1 221 3.67E-63 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 PANTHER PTHR10174 57 346 3.2E-57 T 22-04-2016 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 332 4.0E-48 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 Gene3D G3DSA:3.40.50.720 1 142 9.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 Gene3D G3DSA:3.30.360.10 143 328 5.2E-69 T 22-04-2016 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 SUPERFAMILY SSF55347 129 333 2.05E-65 T 22-04-2016 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 SMART SM00859 6 121 2.2E-40 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 9.3E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 SUPERFAMILY SSF51735 5 156 7.92E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 PIRSF PIRSF000148 4 351 1.8E-117 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 PANTHER PTHR10174:SF2 57 346 3.2E-57 T 22-04-2016 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 346 35.305 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS08760 117c0a618066d4c4eb492e7ca6020c90 364 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 346 1.8E-131 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 Gene3D G3DSA:1.20.1250.20 9 187 1.0E-30 T 22-04-2016 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 SUPERFAMILY SSF103473 4 386 2.49E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 Pfam PF07690 Major Facilitator Superfamily 23 353 1.1E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 384 3.8E-73 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 PANTHER PTHR23502 9 385 9.9E-57 T 22-04-2016 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 PRINTS PR01036 Tetracycline resistance protein TetB signature 340 360 2.0E-8 T 22-04-2016 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 2.0E-8 T 22-04-2016 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 2.0E-8 T 22-04-2016 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 2.0E-8 T 22-04-2016 LMES_RS04915 fc602d6cda26558da863e73c55b2a44f 393 Gene3D G3DSA:1.20.1250.20 208 388 9.9E-6 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 672 9.1E-40 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 177 191 9.1E-40 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 340 354 9.1E-40 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 9.1E-40 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 567 9.1E-40 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 546 9.1E-40 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF81665 686 892 7.06E-112 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF81665 240 334 7.06E-112 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF81665 19 130 7.06E-112 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Gene3D G3DSA:2.70.150.10 125 239 5.5E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Gene3D G3DSA:2.70.150.10 32 70 5.5E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 342 348 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF81660 347 539 3.6E-39 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Gene3D G3DSA:1.20.1110.10 71 124 4.3E-101 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Gene3D G3DSA:1.20.1110.10 605 889 4.3E-101 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Pfam PF00702 haloacid dehalogenase-like hydrolase 336 650 5.4E-26 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF81653 130 239 9.81E-29 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Gene3D G3DSA:3.40.50.1000 543 593 1.0E-4 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SMART SM00831 19 92 3.3E-21 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 603 724 4.3E-31 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 227 362 4.1E-24 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF56784 489 738 2.86E-57 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 SUPERFAMILY SSF56784 338 358 2.86E-57 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PANTHER PTHR24093 28 772 2.5E-265 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PANTHER PTHR24093 788 896 2.5E-265 T 22-04-2016 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Gene3D G3DSA:3.40.1110.10 331 542 2.5E-38 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Pfam PF00122 E1-E2 ATPase 97 331 1.7E-61 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Pfam PF00690 Cation transporter/ATPase, N-terminus 21 86 2.3E-18 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 Pfam PF00689 Cation transporting ATPase, C-terminus 720 889 7.2E-40 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 608 624 2.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 668 693 2.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 636 652 2.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS04660 ec76b4581669e40720d1bdc62ad3ecc4 896 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 492 510 2.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS04390 88e236ffcfe1ff278ec397b10c10457a 245 Gene3D G3DSA:1.10.10.10 187 241 6.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04390 88e236ffcfe1ff278ec397b10c10457a 245 SUPERFAMILY SSF55811 7 126 1.68E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS04390 88e236ffcfe1ff278ec397b10c10457a 245 SUPERFAMILY SSF55811 156 177 1.68E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS04390 88e236ffcfe1ff278ec397b10c10457a 245 Gene3D G3DSA:3.90.79.10 9 186 3.2E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS04390 88e236ffcfe1ff278ec397b10c10457a 245 SUPERFAMILY SSF46785 181 237 1.5E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04390 88e236ffcfe1ff278ec397b10c10457a 245 Pfam PF00293 NUDIX domain 24 128 4.4E-8 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LMES_RS01170 2019234fddeab0187f1012d91acbb36b 76 PANTHER PTHR34386 1 74 5.6E-17 T 22-04-2016 LMES_RS01170 2019234fddeab0187f1012d91acbb36b 76 Pfam PF00462 Glutaredoxin 4 59 2.5E-14 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LMES_RS01170 2019234fddeab0187f1012d91acbb36b 76 PANTHER PTHR34386:SF1 1 74 5.6E-17 T 22-04-2016 LMES_RS01170 2019234fddeab0187f1012d91acbb36b 76 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 4 74 1.6E-30 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 LMES_RS01170 2019234fddeab0187f1012d91acbb36b 76 Gene3D G3DSA:3.40.30.10 3 74 3.1E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS01170 2019234fddeab0187f1012d91acbb36b 76 SUPERFAMILY SSF52833 3 73 4.71E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS05735 684c278583478a1224c548077ce761cd 347 ProSitePatterns PS00770 Aminotransferases class-IV signature. 226 255 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 LMES_RS05735 684c278583478a1224c548077ce761cd 347 PANTHER PTHR11825 1 343 4.0E-139 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LMES_RS05735 684c278583478a1224c548077ce761cd 347 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 37 344 8.6E-120 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 LMES_RS05735 684c278583478a1224c548077ce761cd 347 PIRSF PIRSF006468 1 345 1.3E-109 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 LMES_RS05735 684c278583478a1224c548077ce761cd 347 Gene3D G3DSA:3.30.470.10 4 167 3.4E-60 T 22-04-2016 LMES_RS05735 684c278583478a1224c548077ce761cd 347 Gene3D G3DSA:3.20.10.10 168 331 5.2E-53 T 22-04-2016 LMES_RS05735 684c278583478a1224c548077ce761cd 347 Pfam PF01063 Amino-transferase class IV 63 300 1.1E-35 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LMES_RS05735 684c278583478a1224c548077ce761cd 347 SUPERFAMILY SSF56752 7 341 2.88E-101 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LMES_RS05735 684c278583478a1224c548077ce761cd 347 PANTHER PTHR11825:SF2 1 343 4.0E-139 T 22-04-2016 LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 SMART SM00382 29 216 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 Gene3D G3DSA:3.40.50.300 3 232 1.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 267 2.9E-107 T 22-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 SUPERFAMILY SSF52540 4 230 3.79E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 Pfam PF00005 ABC transporter 21 166 2.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 PANTHER PTHR24220:SF435 6 229 3.4E-89 T 22-04-2016 LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 PANTHER PTHR24220 6 229 3.4E-89 T 22-04-2016 LMES_RS01045 5342eb656d27e687a1469958df34ffb8 272 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 PANTHER PTHR18966:SF152 8 284 1.3E-31 T 22-04-2016 LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 PANTHER PTHR18966 8 284 1.3E-31 T 22-04-2016 LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 284 1.8E-57 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 Gene3D G3DSA:3.40.190.10 135 236 5.3E-19 T 22-04-2016 LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 Gene3D G3DSA:3.40.190.10 244 283 1.1E-37 T 22-04-2016 LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 Gene3D G3DSA:3.40.190.10 55 134 1.1E-37 T 22-04-2016 LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 SMART SM00062 57 284 5.8E-60 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS02775 fbd4149ee8a8a007acec906305b5bfdc 284 SUPERFAMILY SSF53850 17 283 4.5E-62 T 22-04-2016 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 Gene3D G3DSA:1.10.260.40 1 51 2.6E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 SUPERFAMILY SSF47413 1 58 1.78E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 Gene3D G3DSA:3.40.50.2300 52 160 1.2E-16 T 22-04-2016 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 SUPERFAMILY SSF53822 73 305 7.71E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 PANTHER PTHR30146 1 316 1.5E-76 T 22-04-2016 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 Gene3D G3DSA:3.40.50.2300 161 295 3.0E-32 T 22-04-2016 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.6E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 SMART SM00354 1 72 2.3E-24 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 Pfam PF13377 Periplasmic binding protein-like domain 158 316 7.2E-32 T 22-04-2016 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 PANTHER PTHR30146:SF32 1 316 1.5E-76 T 22-04-2016 LMES_RS04270 bcbddefe147efa3d2556e8abc965ce35 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 Gene3D G3DSA:3.30.428.10 3 137 8.8E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 PANTHER PTHR23089:SF14 3 137 1.5E-48 T 22-04-2016 LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 PRINTS PR00332 Histidine triad family signature 92 102 1.8E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 PRINTS PR00332 Histidine triad family signature 24 42 1.8E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 PRINTS PR00332 Histidine triad family signature 3 19 1.8E-16 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 Pfam PF01230 HIT domain 10 106 4.6E-23 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 SUPERFAMILY SSF54197 3 137 3.09E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LMES_RS05415 f9b5eb647fc686247a48ca6795316b4c 140 PANTHER PTHR23089 3 137 1.5E-48 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376:SF32 560 583 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376:SF32 599 1079 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376:SF32 1120 1182 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376:SF32 1 541 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 332 3.6E-88 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 6 1193 10.09 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 SUPERFAMILY SSF64484 6 1185 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 SMART SM00663 225 504 2.4E-170 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 664 3.1E-30 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 475 5.6E-36 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 11 1184 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Pfam PF05000 RNA polymerase Rpb1, domain 4 693 759 1.5E-13 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1132 6.3E-56 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Gene3D G3DSA:2.40.40.20 407 476 1.0E-34 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 Gene3D G3DSA:2.40.40.20 339 366 1.0E-34 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376 560 583 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376 599 1079 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376 1120 1182 0.0 T 22-04-2016 LMES_RS08195 a83b0602da0dabe7b4e5061febfdbe66 1220 PANTHER PTHR19376 1 541 0.0 T 22-04-2016 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 Gene3D G3DSA:2.40.37.10 225 369 5.6E-49 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 SUPERFAMILY SSF50621 239 369 2.62E-43 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PANTHER PTHR30511:SF0 3 370 9.2E-115 T 22-04-2016 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 SMART SM01005 244 369 8.7E-60 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 TIGRFAM TIGR00492 alr: alanine racemase 9 370 1.9E-96 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 Pfam PF01168 Alanine racemase, N-terminal domain 13 230 5.8E-55 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 Hamap MF_01201 Alanine racemase. 6 369 29.528 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 Pfam PF00842 Alanine racemase, C-terminal domain 244 367 4.3E-34 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 277 292 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 67 85 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 127 139 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 297 314 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 203 230 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 163 174 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 31 47 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 351 364 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PRINTS PR00992 Alanine racemase signature 260 275 4.0E-50 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 PANTHER PTHR30511 3 370 9.2E-115 T 22-04-2016 LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 SUPERFAMILY SSF51419 13 245 2.8E-52 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS08765 dac18e69bdee6ea55c9416903088b333 370 Gene3D G3DSA:3.20.20.10 16 224 1.2E-59 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS08485 f9be9e20b99997ebdbb7e9bab9334419 100 Gene3D G3DSA:1.20.1440.50 4 82 1.3E-38 T 22-04-2016 IPR023130 Ta0600-like domain LMES_RS08485 f9be9e20b99997ebdbb7e9bab9334419 100 Pfam PF08951 Enterocin A Immunity 8 79 1.7E-15 T 22-04-2016 IPR015046 Enterocin A Immunity LMES_RS08485 f9be9e20b99997ebdbb7e9bab9334419 100 SUPERFAMILY SSF109797 3 100 5.75E-30 T 22-04-2016 LMES_RS08465 113a4aed6a9a216213f806b2cdc6959f 139 SUPERFAMILY SSF46785 13 137 3.13E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08465 113a4aed6a9a216213f806b2cdc6959f 139 Gene3D G3DSA:1.10.10.10 4 138 2.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08465 113a4aed6a9a216213f806b2cdc6959f 139 SMART SM00347 25 125 4.3E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS08465 113a4aed6a9a216213f806b2cdc6959f 139 Pfam PF01047 MarR family 41 89 2.0E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 SUPERFAMILY SSF54211 88 180 3.41E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 39.659 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 PANTHER PTHR23133 1 195 1.1E-93 T 22-04-2016 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 SUPERFAMILY SSF54211 3 86 3.16E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 Gene3D G3DSA:3.30.230.40 91 194 1.1E-29 T 22-04-2016 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 Gene3D G3DSA:3.30.230.40 2 90 7.8E-36 T 22-04-2016 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 PANTHER PTHR23133:SF2 1 195 1.1E-93 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LMES_RS06920 71db12c3fd482c6482302fdbd280fbb1 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 5.1E-62 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 Gene3D G3DSA:3.40.50.10490 200 417 1.7E-87 T 22-04-2016 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 Pfam PF00342 Phosphoglucose isomerase 74 296 8.1E-17 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 SUPERFAMILY SSF53697 5 445 4.11E-129 T 22-04-2016 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PANTHER PTHR11469 56 439 3.5E-127 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 25.008 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 3.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 3.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 3.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 3.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 3.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 3.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LMES_RS01670 9d529f77c1ed0d8b34b73f4ca377eacd 450 Gene3D G3DSA:3.40.50.10490 68 199 1.9E-27 T 22-04-2016 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 4 302 6.1E-98 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 Gene3D G3DSA:3.30.420.150 128 304 3.1E-39 T 22-04-2016 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 PANTHER PTHR30005 1 305 9.3E-71 T 22-04-2016 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 SUPERFAMILY SSF53067 4 126 6.91E-36 T 22-04-2016 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 SUPERFAMILY SSF53067 129 304 3.52E-37 T 22-04-2016 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 Pfam PF02541 Ppx/GppA phosphatase family 22 303 5.5E-61 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LMES_RS01130 344be6e5717b11d38f454166216e2794 321 Gene3D G3DSA:3.30.420.40 1 125 1.8E-43 T 22-04-2016 LMES_RS00045 0908e16e831af7c68880d74100e2f44d 277 SUPERFAMILY SSF55874 131 238 1.15E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS00045 0908e16e831af7c68880d74100e2f44d 277 PANTHER PTHR40448 1 262 1.4E-24 T 22-04-2016 LMES_RS00045 0908e16e831af7c68880d74100e2f44d 277 Pfam PF14501 GHKL domain 159 258 2.0E-11 T 22-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain LMES_RS00045 0908e16e831af7c68880d74100e2f44d 277 PANTHER PTHR40448:SF1 1 262 1.4E-24 T 22-04-2016 LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 SUPERFAMILY SSF51735 100 279 3.0E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 Gene3D G3DSA:3.40.50.720 106 279 1.4E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 310 2.0E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 SUPERFAMILY SSF52283 1 131 1.61E-29 T 22-04-2016 LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 PANTHER PTHR10996 3 312 1.2E-110 T 22-04-2016 LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 Gene3D G3DSA:3.40.50.720 3 105 1.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02405 83fb68c28cf5726f54c816e92fed5ad9 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 278 3.4E-59 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 SUPERFAMILY SSF48163 307 491 3.79E-31 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 211 7.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 7.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PRINTS PR00987 Glutamyl-tRNA synthetase signature 217 225 7.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 7.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 7.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PANTHER PTHR11451 268 393 1.2E-96 T 22-04-2016 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PANTHER PTHR11451 3 252 1.2E-96 T 22-04-2016 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Gene3D G3DSA:3.90.800.10 70 202 1.5E-32 T 22-04-2016 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Gene3D G3DSA:1.10.10.350 406 490 3.2E-8 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Gene3D G3DSA:3.40.50.620 5 69 1.0E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Gene3D G3DSA:3.40.50.620 203 252 1.0E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 490 7.2E-155 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Gene3D G3DSA:1.10.1160.10 256 339 4.5E-31 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 493 31.883 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PANTHER PTHR11451:SF41 268 393 1.2E-96 T 22-04-2016 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 PANTHER PTHR11451:SF41 3 252 1.2E-96 T 22-04-2016 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 SUPERFAMILY SSF52374 5 323 6.44E-100 T 22-04-2016 LMES_RS00730 5859ff69cc3c20ff609db9484496d92b 498 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 331 1.6E-111 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LMES_RS01730 c0d33df323be6064b33a1ce0d107fcb8 166 PANTHER PTHR11080:SF13 3 159 4.4E-27 T 22-04-2016 LMES_RS01730 c0d33df323be6064b33a1ce0d107fcb8 166 Gene3D G3DSA:3.40.50.850 7 142 1.4E-34 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LMES_RS01730 c0d33df323be6064b33a1ce0d107fcb8 166 PANTHER PTHR11080 3 159 4.4E-27 T 22-04-2016 LMES_RS01730 c0d33df323be6064b33a1ce0d107fcb8 166 Pfam PF00857 Isochorismatase family 7 132 1.0E-27 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LMES_RS01730 c0d33df323be6064b33a1ce0d107fcb8 166 SUPERFAMILY SSF52499 7 164 6.28E-40 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LMES_RS03860 68883e926ae7fefcbcb9a31ed5f6d2fa 149 Gene3D G3DSA:1.10.10.10 12 80 8.0E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03860 68883e926ae7fefcbcb9a31ed5f6d2fa 149 SUPERFAMILY SSF46785 12 140 8.84E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03860 68883e926ae7fefcbcb9a31ed5f6d2fa 149 PANTHER PTHR33202 5 144 3.8E-18 T 22-04-2016 LMES_RS03860 68883e926ae7fefcbcb9a31ed5f6d2fa 149 Pfam PF01475 Ferric uptake regulator family 18 115 7.3E-18 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LMES_RS02605 dacb267217639e2937bf402940baac2a 365 SUPERFAMILY SSF53092 4 138 5.06E-26 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal LMES_RS02605 dacb267217639e2937bf402940baac2a 365 PANTHER PTHR10804 1 363 1.6E-116 T 22-04-2016 LMES_RS02605 dacb267217639e2937bf402940baac2a 365 Pfam PF00557 Metallopeptidase family M24 147 344 4.8E-55 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS02605 dacb267217639e2937bf402940baac2a 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 139 9.0E-19 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 LMES_RS02605 dacb267217639e2937bf402940baac2a 365 PANTHER PTHR10804:SF106 1 363 1.6E-116 T 22-04-2016 LMES_RS02605 dacb267217639e2937bf402940baac2a 365 SUPERFAMILY SSF55920 96 359 8.77E-71 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS02605 dacb267217639e2937bf402940baac2a 365 Gene3D G3DSA:3.40.350.10 4 137 7.9E-26 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LMES_RS02605 dacb267217639e2937bf402940baac2a 365 Gene3D G3DSA:3.90.230.10 139 362 6.1E-70 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS02605 dacb267217639e2937bf402940baac2a 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 295 307 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LMES_RS08515 f4a0141a34b1c96ed766ff88bf0c1d4c 251 Pfam PF01381 Helix-turn-helix 7 59 7.0E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08515 f4a0141a34b1c96ed766ff88bf0c1d4c 251 SUPERFAMILY SSF47413 1 65 9.29E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08515 f4a0141a34b1c96ed766ff88bf0c1d4c 251 PANTHER PTHR10245 1 133 3.8E-15 T 22-04-2016 LMES_RS08515 f4a0141a34b1c96ed766ff88bf0c1d4c 251 SMART SM00530 6 61 8.5E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08515 f4a0141a34b1c96ed766ff88bf0c1d4c 251 Gene3D G3DSA:1.10.260.40 1 64 8.3E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 PRINTS PR00421 Thioredoxin family signature 67 78 6.2E-7 T 22-04-2016 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 PRINTS PR00421 Thioredoxin family signature 20 28 6.2E-7 T 22-04-2016 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 PRINTS PR00421 Thioredoxin family signature 28 37 6.2E-7 T 22-04-2016 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 6.6E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 SUPERFAMILY SSF52833 3 103 3.43E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 PANTHER PTHR10438 2 104 9.6E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 Gene3D G3DSA:3.40.30.10 1 102 1.4E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 PIRSF PIRSF000077 1 103 2.9E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS00520 9fc32f5f8633cca0ad9dcef24ca5b748 104 Pfam PF00085 Thioredoxin 3 101 4.6E-26 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 PANTHER PTHR18964 1 288 1.7E-74 T 22-04-2016 LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 Pfam PF00480 ROK family 5 286 1.5E-64 T 22-04-2016 IPR000600 ROK family LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 ProSitePatterns PS01125 ROK family signature. 131 156 - T 22-04-2016 IPR000600 ROK family LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 Gene3D G3DSA:3.30.420.40 106 286 7.3E-63 T 22-04-2016 LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 Gene3D G3DSA:3.30.420.40 2 105 1.6E-32 T 22-04-2016 LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 PANTHER PTHR18964:SF10 1 288 1.7E-74 T 22-04-2016 LMES_RS01350 1832bac1c32fd687456ddfa370d75914 288 SUPERFAMILY SSF53067 3 286 4.56E-47 T 22-04-2016 LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 SUPERFAMILY SSF51735 8 243 2.55E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 Gene3D G3DSA:3.40.50.720 8 243 2.2E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PANTHER PTHR24321:SF6 4 243 1.0E-47 T 22-04-2016 LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 PANTHER PTHR24321 4 243 1.0E-47 T 22-04-2016 LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 242 4.0E-52 T 22-04-2016 LMES_RS05470 7d5029fb86e0781369301ef9a166a07d 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 1.0E-10 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 SUPERFAMILY SSF116842 3 69 1.57E-16 T 22-04-2016 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 PIRSF PIRSF006488 1 74 1.3E-17 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 Pfam PF02609 Exonuclease VII small subunit 7 56 1.4E-15 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 13.329 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 Gene3D G3DSA:1.10.287.1040 3 71 3.9E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 5.9E-19 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07175 dd8e4a8a4aee3b24c29ca59e6eaab74a 74 PANTHER PTHR34137 1 74 8.9E-15 T 22-04-2016 LMES_RS08330 6e032de7eef6ba8a81b15c4ca34aa76c 443 Pfam PF13520 Amino acid permease 12 406 9.1E-59 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08330 6e032de7eef6ba8a81b15c4ca34aa76c 443 PANTHER PTHR11785:SF261 3 439 7.9E-96 T 22-04-2016 LMES_RS08330 6e032de7eef6ba8a81b15c4ca34aa76c 443 PANTHER PTHR11785 3 439 7.9E-96 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08330 6e032de7eef6ba8a81b15c4ca34aa76c 443 PIRSF PIRSF006060 1 443 8.7E-76 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08560 91cdaff381ccacc6bd1bb10660377191 167 SUPERFAMILY SSF52540 1 153 3.35E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08560 91cdaff381ccacc6bd1bb10660377191 167 PANTHER PTHR37816:SF1 2 167 2.9E-44 T 22-04-2016 LMES_RS08560 91cdaff381ccacc6bd1bb10660377191 167 Gene3D G3DSA:3.40.50.300 1 157 1.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08560 91cdaff381ccacc6bd1bb10660377191 167 PANTHER PTHR37816 2 167 2.9E-44 T 22-04-2016 LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 Gene3D G3DSA:3.40.50.720 4 113 2.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 SUPERFAMILY SSF52283 4 128 1.47E-30 T 22-04-2016 LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 280 1.2E-56 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 PANTHER PTHR10996 4 312 4.0E-100 T 22-04-2016 LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 Gene3D G3DSA:3.40.50.720 114 281 1.5E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 190 212 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 312 2.7E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS05440 c8c622b17514d8288f2cc2fb826adf24 312 SUPERFAMILY SSF51735 101 281 9.34E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05875 9901e11c593403fc03d9d0c94ef7086e 302 PANTHER PTHR13767:SF2 1 299 1.1E-92 T 22-04-2016 LMES_RS05875 9901e11c593403fc03d9d0c94ef7086e 302 PANTHER PTHR13767 1 299 1.1E-92 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05875 9901e11c593403fc03d9d0c94ef7086e 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 7 299 17.391 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05875 9901e11c593403fc03d9d0c94ef7086e 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 29 183 2.9E-53 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 LMES_RS05875 9901e11c593403fc03d9d0c94ef7086e 302 SUPERFAMILY SSF55120 7 237 2.08E-74 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05875 9901e11c593403fc03d9d0c94ef7086e 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 7 220 4.3E-69 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 SUPERFAMILY SSF51445 4 428 1.48E-72 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS01815 f3a6954826067b0db7d628972f156842 492 SMART SM00642 6 426 5.4E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 PANTHER PTHR10357 345 464 3.5E-103 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 PANTHER PTHR10357 1 297 3.5E-103 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 PANTHER PTHR10357:SF132 345 464 3.5E-103 T 22-04-2016 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 PANTHER PTHR10357:SF132 1 297 3.5E-103 T 22-04-2016 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 Gene3D G3DSA:3.90.400.10 88 170 1.6E-30 T 22-04-2016 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 PIRSF PIRSF003059 1 492 6.8E-190 T 22-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 477 2.3E-262 T 22-04-2016 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 Gene3D G3DSA:3.20.20.80 176 428 1.1E-93 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 Gene3D G3DSA:3.20.20.80 4 87 1.1E-93 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS01815 f3a6954826067b0db7d628972f156842 492 Pfam PF00128 Alpha amylase, catalytic domain 36 264 1.4E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PRINTS PR00070 Dihydrofolate reductase signature 15 25 6.0E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PRINTS PR00070 Dihydrofolate reductase signature 42 53 6.0E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PRINTS PR00070 Dihydrofolate reductase signature 96 110 6.0E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PRINTS PR00070 Dihydrofolate reductase signature 29 37 6.0E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PANTHER PTHR22778:SF16 1 164 5.8E-33 T 22-04-2016 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 Gene3D G3DSA:3.40.430.10 1 164 3.0E-51 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PANTHER PTHR22778 1 164 5.8E-33 T 22-04-2016 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 SUPERFAMILY SSF53597 2 164 5.63E-50 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 Pfam PF00186 Dihydrofolate reductase 3 164 4.1E-55 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS03635 99b1cefc875ce9e63acd784ab01f7df3 165 PIRSF PIRSF000194 1 165 6.8E-50 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LMES_RS05450 fdd450119c32649119076321ed3d848f 219 SUPERFAMILY SSF161098 13 204 5.36E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS05450 fdd450119c32649119076321ed3d848f 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.5E-23 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS05450 fdd450119c32649119076321ed3d848f 219 Gene3D G3DSA:1.10.3720.10 10 216 7.3E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS05450 fdd450119c32649119076321ed3d848f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 4.1E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS05450 fdd450119c32649119076321ed3d848f 219 PANTHER PTHR30614 1 219 1.1E-81 T 22-04-2016 LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 9 83 6.7E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 243 6.2E-80 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 SUPERFAMILY SSF55315 3 80 7.42E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 Gene3D G3DSA:3.40.1280.10 94 244 4.0E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 PANTHER PTHR12029 8 240 2.3E-76 T 22-04-2016 LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 SMART SM00967 9 84 2.5E-19 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 SUPERFAMILY SSF75217 72 245 1.44E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 Gene3D G3DSA:3.30.1330.30 4 79 2.4E-23 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS08185 a355c2809f3f97af576a36079a85c864 249 Pfam PF00588 SpoU rRNA Methylase family 101 240 6.2E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 2 403 6.3E-188 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 PIRSF PIRSF005572 18 407 6.1E-56 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 Pfam PF00266 Aminotransferase class-V 22 392 1.3E-159 T 22-04-2016 IPR000192 Aminotransferase class V domain LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 SUPERFAMILY SSF53383 2 400 1.24E-131 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 PANTHER PTHR11601 4 405 9.5E-211 T 22-04-2016 LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 Gene3D G3DSA:3.90.1150.10 280 399 6.7E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 Gene3D G3DSA:3.40.640.10 32 279 8.7E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS09230 4ad96333e8ffc5af0f4ba0dd43a057fb 408 PANTHER PTHR11601:SF17 4 405 9.5E-211 T 22-04-2016 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 PANTHER PTHR11070 488 767 2.9E-132 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 Gene3D G3DSA:3.40.50.300 626 786 4.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 SUPERFAMILY SSF52540 689 771 2.66E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 SUPERFAMILY SSF52540 415 660 4.95E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 SUPERFAMILY SSF52540 210 315 4.95E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 Pfam PF13245 Part of AAA domain 218 278 7.2E-8 T 22-04-2016 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 Pfam PF13538 UvrD-like helicase C-terminal domain 720 767 1.8E-9 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 Gene3D G3DSA:3.40.50.300 203 312 1.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 Gene3D G3DSA:3.40.50.300 534 625 1.3E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 PANTHER PTHR11070 110 291 2.9E-132 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 PANTHER PTHR11070 339 431 2.9E-132 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 PANTHER PTHR11070:SF17 488 767 2.9E-132 T 22-04-2016 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 PANTHER PTHR11070:SF17 339 431 2.9E-132 T 22-04-2016 LMES_RS08460 ef57c679baaba8c9213abf544e65ea88 787 PANTHER PTHR11070:SF17 110 291 2.9E-132 T 22-04-2016 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 6 517 2.4E-217 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 SMART SM00322 206 273 5.4E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 Pfam PF00013 KH domain 212 268 1.1E-6 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 TIGRFAM TIGR00277 HDIG: HDIG domain 330 407 4.0E-24 T 22-04-2016 IPR006675 HDIG domain LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 Gene3D G3DSA:1.10.3210.10 313 492 2.6E-41 T 22-04-2016 IPR006674 HD domain LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 SUPERFAMILY SSF54791 209 302 1.18E-15 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 Pfam PF12072 Domain of unknown function (DUF3552) 4 202 4.6E-57 T 22-04-2016 IPR022711 Ribonuclease Y, N-terminal LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 Pfam PF01966 HD domain 334 426 5.4E-18 T 22-04-2016 IPR006674 HD domain LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 SMART SM00471 330 436 2.9E-13 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 Gene3D G3DSA:3.30.1370.10 218 295 4.4E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 SUPERFAMILY SSF109604 316 467 1.55E-28 T 22-04-2016 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 PANTHER PTHR12826 188 517 9.7E-133 T 22-04-2016 LMES_RS07700 30c9a2f577ab9021d6e960e522b107a5 518 Hamap MF_00335 Ribonuclease Y [rny]. 3 518 24.112 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 SUPERFAMILY SSF53335 56 265 7.89E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 Pfam PF01728 FtsJ-like methyltransferase 63 245 2.8E-18 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 SMART SM00363 6 72 3.0E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 240 1.0E-82 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 Pfam PF01479 S4 domain 6 40 2.1E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 Gene3D G3DSA:3.10.290.10 6 93 5.6E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 PANTHER PTHR32319:SF0 1 267 9.6E-127 T 22-04-2016 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 PIRSF PIRSF005578 1 265 2.4E-98 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 Gene3D G3DSA:3.40.50.150 94 161 3.5E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 PANTHER PTHR32319 1 267 9.6E-127 T 22-04-2016 LMES_RS07165 937e5b69a58ce1776efb2590240fec87 278 SUPERFAMILY SSF55174 3 72 2.06E-9 T 22-04-2016 LMES_RS04705 b6a5ce9ef14168589a03df3b32e2bf65 556 Gene3D G3DSA:3.10.20.320 272 346 9.3E-18 T 22-04-2016 IPR009459 MucBP domain LMES_RS04705 b6a5ce9ef14168589a03df3b32e2bf65 556 Gene3D G3DSA:2.60.120.200 47 262 9.8E-16 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain LMES_RS04705 b6a5ce9ef14168589a03df3b32e2bf65 556 Pfam PF06458 MucBP domain 274 336 8.9E-17 T 22-04-2016 IPR009459 MucBP domain LMES_RS04705 b6a5ce9ef14168589a03df3b32e2bf65 556 SUPERFAMILY SSF49899 47 263 2.08E-21 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain LMES_RS04705 b6a5ce9ef14168589a03df3b32e2bf65 556 Pfam PF03388 Legume-like lectin family 43 117 1.9E-5 T 22-04-2016 IPR005052 Legume-like lectin GO:0016020 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 PANTHER PTHR30175:SF1 5 494 5.4E-107 T 22-04-2016 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 Pfam PF00367 phosphotransferase system, EIIB 11 44 1.0E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 Gene3D G3DSA:3.30.1360.60 5 76 3.6E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 PANTHER PTHR30175 5 494 5.4E-107 T 22-04-2016 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 SUPERFAMILY SSF55604 9 85 6.41E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 Gene3D G3DSA:3.40.367.20 77 159 4.8E-4 T 22-04-2016 LMES_RS02430 925f6878bfb6024094f9fca4ea23195b 504 Pfam PF02378 Phosphotransferase system, EIIC 130 419 3.8E-30 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 PANTHER PTHR10000 1 255 4.2E-26 T 22-04-2016 LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 SUPERFAMILY SSF56784 1 252 4.55E-47 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 245 1.0E-44 T 22-04-2016 IPR000150 Cof protein GO:0016787 LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 224 4.0E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 Gene3D G3DSA:3.40.50.1000 160 254 1.7E-35 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 Gene3D G3DSA:3.40.50.1000 1 72 1.7E-35 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 243 2.6E-44 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04425 b4040fa9f08a58e86065f82f61dbff3a 255 PANTHER PTHR10000:SF25 1 255 4.2E-26 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.9E-6 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.9E-6 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.9E-6 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.5E-7 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 5.5E-7 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 5.5E-7 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Pfam PF02540 NAD synthase 216 284 1.7E-7 T 22-04-2016 IPR022310 NAD/GMP synthase LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 SUPERFAMILY SSF52402 189 407 1.75E-59 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 5 514 52.88 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Pfam PF00958 GMP synthase C terminal domain 422 513 2.7E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Gene3D G3DSA:3.30.300.10 390 514 1.0E-49 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.4E-5 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.4E-5 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 8 22 1.4E-5 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 SUPERFAMILY SSF52317 6 229 2.04E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Gene3D G3DSA:3.40.50.620 215 389 6.4E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Pfam PF00117 Glutamine amidotransferase class-I 10 191 6.0E-41 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 8 196 2.1E-68 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 Gene3D G3DSA:3.40.50.880 6 214 2.1E-60 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PANTHER PTHR11922:SF2 6 511 7.7E-278 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 PANTHER PTHR11922 6 511 7.7E-278 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 SUPERFAMILY SSF54810 394 514 5.36E-50 T 22-04-2016 LMES_RS03110 69ba1b63b5abdcca9c1aaf5d0cdaa228 514 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 514 1.4E-152 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PANTHER PTHR21087:SF0 8 181 2.3E-49 T 22-04-2016 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 SUPERFAMILY SSF48600 178 263 5.8E-14 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 Pfam PF01202 Shikimate kinase 14 167 4.5E-45 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 Hamap MF_00109 Shikimate kinase [aroK]. 5 170 27.144 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 Gene3D G3DSA:1.20.59.10 170 261 2.2E-14 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PRINTS PR01100 Shikimate kinase family signature 8 23 2.8E-23 T 22-04-2016 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PRINTS PR01100 Shikimate kinase family signature 77 86 2.8E-23 T 22-04-2016 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PRINTS PR01100 Shikimate kinase family signature 60 68 2.8E-23 T 22-04-2016 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PRINTS PR01100 Shikimate kinase family signature 99 116 2.8E-23 T 22-04-2016 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PRINTS PR01100 Shikimate kinase family signature 32 45 2.8E-23 T 22-04-2016 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 Pfam PF01817 Chorismate mutase type II 182 260 3.9E-14 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 SMART SM00830 182 263 3.1E-12 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 Gene3D G3DSA:3.40.50.300 6 169 6.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 ProSitePatterns PS01128 Shikimate kinase signature. 61 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 SUPERFAMILY SSF52540 9 166 8.13E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05090 1d2abb8b9728a0a4268971e8b371a450 266 PANTHER PTHR21087 8 181 2.3E-49 T 22-04-2016 LMES_RS03875 2358d60da60207706c5a81648d236859 266 PANTHER PTHR30477:SF0 1 257 1.5E-43 T 22-04-2016 LMES_RS03875 2358d60da60207706c5a81648d236859 266 PANTHER PTHR30477 1 257 1.5E-43 T 22-04-2016 LMES_RS03875 2358d60da60207706c5a81648d236859 266 Pfam PF00950 ABC 3 transport family 4 257 2.7E-48 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LMES_RS03875 2358d60da60207706c5a81648d236859 266 SUPERFAMILY SSF81345 2 255 4.71E-28 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LMES_RS06240 373b367d1a8df1b281a16080cb60edda 291 Gene3D G3DSA:3.90.550.10 1 257 4.1E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06240 373b367d1a8df1b281a16080cb60edda 291 SUPERFAMILY SSF53448 1 287 1.45E-92 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06240 373b367d1a8df1b281a16080cb60edda 291 PANTHER PTHR22572 2 269 4.0E-160 T 22-04-2016 LMES_RS06240 373b367d1a8df1b281a16080cb60edda 291 Pfam PF00483 Nucleotidyl transferase 2 238 1.5E-71 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LMES_RS06240 373b367d1a8df1b281a16080cb60edda 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.2E-147 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LMES_RS06240 373b367d1a8df1b281a16080cb60edda 291 PANTHER PTHR22572:SF105 2 269 4.0E-160 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LMES_RS06115 79e35c1f101bc4e967c587bcb53e422c 317 Pfam PF00535 Glycosyl transferase family 2 15 147 3.7E-29 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS06115 79e35c1f101bc4e967c587bcb53e422c 317 SUPERFAMILY SSF53448 13 233 1.86E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06115 79e35c1f101bc4e967c587bcb53e422c 317 PANTHER PTHR10859:SF81 14 317 5.3E-136 T 22-04-2016 LMES_RS06115 79e35c1f101bc4e967c587bcb53e422c 317 Gene3D G3DSA:3.90.550.10 13 158 9.4E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06115 79e35c1f101bc4e967c587bcb53e422c 317 PANTHER PTHR10859 14 317 5.3E-136 T 22-04-2016 LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 SUPERFAMILY SSF53067 5 116 8.42E-12 T 22-04-2016 LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 Gene3D G3DSA:3.30.420.40 7 116 1.6E-11 T 22-04-2016 LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 Pfam PF01966 HD domain 317 432 3.7E-5 T 22-04-2016 IPR006674 HD domain LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 PANTHER PTHR30005:SF0 32 479 9.4E-20 T 22-04-2016 LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 Pfam PF02541 Ppx/GppA phosphatase family 14 292 1.2E-12 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 Gene3D G3DSA:1.10.3210.10 296 436 9.5E-9 T 22-04-2016 IPR006674 HD domain LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 PANTHER PTHR30005 32 479 9.4E-20 T 22-04-2016 LMES_RS01120 06ff7eb07c772b018b76c867d84ad2ba 492 SUPERFAMILY SSF109604 304 488 1.7E-38 T 22-04-2016 LMES_RS04500 93b28ebcfef8dd22f067c2ae59bf0070 449 Pfam PF02378 Phosphotransferase system, EIIC 35 369 1.7E-48 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS04500 93b28ebcfef8dd22f067c2ae59bf0070 449 PIRSF PIRSF006351 3 448 1.1E-120 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LMES_RS04500 93b28ebcfef8dd22f067c2ae59bf0070 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 19 441 1.0E-89 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LMES_RS04500 93b28ebcfef8dd22f067c2ae59bf0070 449 PANTHER PTHR33989 1 442 1.6E-106 T 22-04-2016 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 1.27E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 1.27E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.27E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.27E-22 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 561 1.5E-99 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 7.1E-224 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 SUPERFAMILY SSF50249 3 106 1.62E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Gene3D G3DSA:3.30.930.10 134 280 7.8E-102 T 22-04-2016 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Gene3D G3DSA:3.30.930.10 416 586 7.8E-102 T 22-04-2016 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 567 34.418 T 22-04-2016 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Gene3D G3DSA:2.40.50.140 1 109 1.1E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 1.1E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Gene3D G3DSA:3.30.1360.30 281 415 1.4E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 SUPERFAMILY SSF55261 295 420 3.76E-39 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PANTHER PTHR22594 370 575 3.1E-222 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PANTHER PTHR22594 1 301 3.1E-222 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PANTHER PTHR22594:SF5 370 575 3.1E-222 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 PANTHER PTHR22594:SF5 1 301 3.1E-222 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 Pfam PF02938 GAD domain 312 405 5.0E-28 T 22-04-2016 IPR029351 GAD domain LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 SUPERFAMILY SSF55681 426 585 5.16E-95 T 22-04-2016 LMES_RS05685 6686de0a112b4f9e8a0dec37707efcd2 591 SUPERFAMILY SSF55681 110 296 5.16E-95 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 SUPERFAMILY SSF81653 188 283 2.09E-21 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 Pfam PF00702 haloacid dehalogenase-like hydrolase 382 587 1.5E-31 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 119 681 1.9E-147 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 386 392 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 SUPERFAMILY SSF81665 135 189 4.71E-8 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 SUPERFAMILY SSF81665 286 373 4.71E-8 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 Pfam PF00122 E1-E2 ATPase 158 374 1.8E-47 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 Gene3D G3DSA:2.70.150.10 180 284 4.6E-20 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 629 1.9E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 573 589 1.9E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 546 562 1.9E-5 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 Gene3D G3DSA:3.40.50.1000 494 641 8.9E-41 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 Gene3D G3DSA:3.40.50.1000 360 392 8.9E-41 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 145 681 1.0E-95 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 Gene3D G3DSA:3.40.1110.10 393 428 3.2E-4 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 160 666 9.9E-79 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 SUPERFAMILY SSF56784 440 679 2.02E-48 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 SUPERFAMILY SSF56784 385 402 2.02E-48 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PANTHER PTHR24093:SF332 4 682 8.2E-181 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PANTHER PTHR24093 4 682 8.2E-181 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 596 608 1.7E-23 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 592 1.7E-23 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 531 1.7E-23 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 235 249 1.7E-23 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 384 398 1.7E-23 T 22-04-2016 LMES_RS00235 66dedd3cae56680e73c1961b71de5848 683 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 101 682 7.2E-160 T 22-04-2016 LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 PIRSF PIRSF000525 1 362 1.4E-134 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 SUPERFAMILY SSF53383 3 359 2.96E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 Pfam PF00266 Aminotransferase class-V 4 350 5.8E-44 T 22-04-2016 IPR000192 Aminotransferase class V domain LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 Gene3D G3DSA:3.40.640.10 15 259 8.5E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 PANTHER PTHR21152:SF1 4 355 5.9E-123 T 22-04-2016 LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 PANTHER PTHR21152 4 355 5.9E-123 T 22-04-2016 LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 Gene3D G3DSA:3.90.1150.10 260 359 2.3E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS06450 f49290d15007489bc9bbad93c6ffc690 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 361 41.277 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 SUPERFAMILY SSF52507 4 177 6.02E-53 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 Pfam PF02441 Flavoprotein 8 133 3.1E-32 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 Gene3D G3DSA:3.40.50.10300 186 400 5.5E-80 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 SUPERFAMILY SSF102645 186 399 1.06E-70 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 PANTHER PTHR14359:SF20 1 400 9.3E-152 T 22-04-2016 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 Gene3D G3DSA:3.40.50.1950 6 182 4.1E-53 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 371 6.3E-69 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 PANTHER PTHR14359 1 400 9.3E-152 T 22-04-2016 LMES_RS05365 dfd20e29d0dc4c7b833d4453daea6522 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 396 2.0E-129 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 LMES_RS06820 37c76acd90ec5290e8ff3913301ae071 395 Pfam PF04203 Sortase family 114 238 7.2E-21 T 22-04-2016 IPR005754 Sortase family LMES_RS06820 37c76acd90ec5290e8ff3913301ae071 395 TIGRFAM TIGR01076 sortase_fam: sortase 111 239 1.1E-42 T 22-04-2016 IPR005754 Sortase family LMES_RS06820 37c76acd90ec5290e8ff3913301ae071 395 SUPERFAMILY SSF63817 98 240 4.58E-41 T 22-04-2016 IPR023365 Sortase domain LMES_RS06820 37c76acd90ec5290e8ff3913301ae071 395 Gene3D G3DSA:2.40.260.10 106 240 2.7E-42 T 22-04-2016 IPR023365 Sortase domain LMES_RS06820 37c76acd90ec5290e8ff3913301ae071 395 PANTHER PTHR33393:SF5 111 320 4.0E-19 T 22-04-2016 LMES_RS06820 37c76acd90ec5290e8ff3913301ae071 395 PANTHER PTHR33393 111 320 4.0E-19 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 812 40.478 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 818 8.0E-242 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Pfam PF03483 B3/4 domain 234 405 3.5E-68 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 PANTHER PTHR10947 2 818 1.6E-246 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 PANTHER PTHR10947:SF0 2 818 1.6E-246 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SMART SM00896 725 818 1.2E-36 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SMART SM00874 423 491 1.2E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:3.30.56.20 425 495 1.8E-23 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:2.40.50.140 47 172 4.5E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Pfam PF03147 Ferredoxin-fold anticodon binding domain 725 818 1.3E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:3.30.70.380 727 818 4.3E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SUPERFAMILY SSF54991 720 818 1.31E-27 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SUPERFAMILY SSF50249 47 213 1.3E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Pfam PF03484 tRNA synthetase B5 domain 427 491 4.3E-17 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SUPERFAMILY SSF56037 217 414 1.73E-71 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:3.50.40.10 217 414 9.3E-82 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SUPERFAMILY SSF55681 487 708 8.95E-46 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:3.30.930.10 508 711 1.4E-57 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SUPERFAMILY SSF46955 425 495 3.57E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 SMART SM00873 232 406 1.9E-88 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:3.30.56.10 1 43 4.1E-15 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Gene3D G3DSA:3.30.56.10 173 202 4.1E-15 T 22-04-2016 LMES_RS02135 424bc6258bfe026840acf48dbf76ac46 818 Pfam PF01588 Putative tRNA binding domain 50 138 1.4E-14 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 PANTHER PTHR18804 1 36 1.4E-18 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 Pfam PF00444 Ribosomal protein L36 1 38 7.6E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 9.0E-8 T 22-04-2016 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 SUPERFAMILY SSF57840 1 38 1.57E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.2E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.201 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01010 c43e7b0d134b51de550b968f7da86fbf 39 PANTHER PTHR18804:SF7 1 36 1.4E-18 T 22-04-2016 LMES_RS07555 292664d91acc12360719e67ed2512515 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 47 110 6.0E-6 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LMES_RS07555 292664d91acc12360719e67ed2512515 303 SUPERFAMILY SSF111331 6 301 2.03E-18 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 SUPERFAMILY SSF48498 82 176 1.67E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 PANTHER PTHR30055 9 190 4.2E-25 T 22-04-2016 LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 SUPERFAMILY SSF46689 6 72 1.13E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 Gene3D G3DSA:1.10.357.10 3 194 1.1E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 9.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 9.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS00725 420125d4a9068d26ced0ac2865a8dc7c 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.7E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 SUPERFAMILY SSF51011 498 560 4.14E-12 T 22-04-2016 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 SUPERFAMILY SSF51445 4 486 1.4E-149 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04355 6686691419ee032e5a74f96077f56333 570 Gene3D G3DSA:3.90.400.10 106 177 2.0E-30 T 22-04-2016 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 Gene3D G3DSA:3.20.20.80 4 105 1.9E-119 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 Gene3D G3DSA:3.20.20.80 178 488 1.9E-119 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 Gene3D G3DSA:2.60.40.1180 497 560 4.4E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LMES_RS04355 6686691419ee032e5a74f96077f56333 570 SMART SM00642 14 428 9.8E-147 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 Pfam PF11941 Domain of unknown function (DUF3459) 472 542 5.6E-6 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LMES_RS04355 6686691419ee032e5a74f96077f56333 570 PANTHER PTHR10357:SF142 1 404 3.2E-224 T 22-04-2016 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 PANTHER PTHR10357:SF142 465 551 3.2E-224 T 22-04-2016 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 PANTHER PTHR10357:SF142 421 433 3.2E-224 T 22-04-2016 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 Pfam PF00128 Alpha amylase, catalytic domain 29 383 5.7E-116 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 PANTHER PTHR10357 1 404 3.2E-224 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 PANTHER PTHR10357 465 551 3.2E-224 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04355 6686691419ee032e5a74f96077f56333 570 PANTHER PTHR10357 421 433 3.2E-224 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS02540 7710c628f8c1a5125f25f4b0966ee2f3 429 Pfam PF07261 Replication initiation and membrane attachment 303 370 4.4E-8 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain LMES_RS02540 7710c628f8c1a5125f25f4b0966ee2f3 429 ProDom PD042352 MG349 G12_ORF413 HOMOLOG 70 198 6.0E-7 T 22-04-2016 LMES_RS05405 42660ad7499050ccaac2260a922ae786 428 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 408 3.1E-93 T 22-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 LMES_RS05405 42660ad7499050ccaac2260a922ae786 428 PIRSF PIRSF037259 1 428 7.4E-65 T 22-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 LMES_RS05405 42660ad7499050ccaac2260a922ae786 428 PANTHER PTHR41253 1 428 2.8E-27 T 22-04-2016 LMES_RS02275 4a4cb11221acc56f5df3f9bb53cf6088 385 PANTHER PTHR38730:SF1 4 383 8.3E-15 T 22-04-2016 LMES_RS02275 4a4cb11221acc56f5df3f9bb53cf6088 385 Pfam PF09967 VWA-like domain (DUF2201) 263 385 7.9E-15 T 22-04-2016 IPR018698 VWA-like domain LMES_RS02275 4a4cb11221acc56f5df3f9bb53cf6088 385 PANTHER PTHR38730 4 383 8.3E-15 T 22-04-2016 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 SUPERFAMILY SSF46785 94 138 5.57E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 515 651 8.4E-16 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Gene3D G3DSA:1.10.10.10 91 157 5.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 SUPERFAMILY SSF63520 301 392 1.96E-19 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 SUPERFAMILY SSF52794 402 482 8.37E-6 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Gene3D G3DSA:3.40.930.10 509 650 1.0E-16 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Pfam PF00874 PRD domain 205 283 1.1E-7 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Pfam PF00874 PRD domain 304 391 4.9E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Pfam PF05043 Mga helix-turn-helix domain 94 171 2.3E-11 T 22-04-2016 IPR007737 Mga helix-turn-helix domain LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 SUPERFAMILY SSF63520 197 283 9.81E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 PANTHER PTHR30185:SF5 1 658 3.0E-129 T 22-04-2016 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Gene3D G3DSA:1.10.10.10 1 64 8.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Gene3D G3DSA:1.10.1790.10 302 394 2.1E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Gene3D G3DSA:1.10.1790.10 200 284 1.9E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 PANTHER PTHR30185 1 658 3.0E-129 T 22-04-2016 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Gene3D G3DSA:3.40.50.270 405 486 1.7E-5 T 22-04-2016 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 404 482 9.1E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 SUPERFAMILY SSF55804 513 653 8.55E-18 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LMES_RS04485 dfda2407494d897bdfe116e65fe89564 663 Pfam PF08279 HTH domain 5 63 1.1E-9 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 PANTHER PTHR10196 1 508 2.2E-230 T 22-04-2016 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 Gene3D G3DSA:3.30.420.40 1 248 9.3E-64 T 22-04-2016 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 3 508 2.2E-232 T 22-04-2016 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 3.6E-66 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 SUPERFAMILY SSF53067 3 250 4.29E-65 T 22-04-2016 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 SUPERFAMILY SSF53067 251 499 2.18E-67 T 22-04-2016 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 PANTHER PTHR10196:SF41 1 508 2.2E-230 T 22-04-2016 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 451 6.4E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 Gene3D G3DSA:3.30.420.40 251 497 3.6E-59 T 22-04-2016 LMES_RS02650 1a99349fd91df3fc3fc1a43271328fe1 512 PIRSF PIRSF000538 1 504 2.4E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LMES_RS01765 0da758a20873d9a640fd389158110628 257 SUPERFAMILY SSF52540 4 240 2.21E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01765 0da758a20873d9a640fd389158110628 257 Pfam PF00005 ABC transporter 19 170 5.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01765 0da758a20873d9a640fd389158110628 257 PANTHER PTHR24220 5 246 1.1E-124 T 22-04-2016 LMES_RS01765 0da758a20873d9a640fd389158110628 257 SMART SM00382 28 218 3.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01765 0da758a20873d9a640fd389158110628 257 Gene3D G3DSA:3.40.50.300 3 241 9.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01765 0da758a20873d9a640fd389158110628 257 PANTHER PTHR24220:SF550 5 246 1.1E-124 T 22-04-2016 LMES_RS01765 0da758a20873d9a640fd389158110628 257 PIRSF PIRSF039085 1 245 7.2E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS01765 0da758a20873d9a640fd389158110628 257 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 Pfam PF13377 Periplasmic binding protein-like domain 194 355 2.1E-32 T 22-04-2016 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 SUPERFAMILY SSF53822 81 356 3.08E-62 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 PANTHER PTHR30146:SF39 22 355 1.8E-72 T 22-04-2016 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 Gene3D G3DSA:3.40.50.2300 81 196 3.5E-31 T 22-04-2016 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 Gene3D G3DSA:3.40.50.2300 197 356 6.3E-44 T 22-04-2016 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 SMART SM00345 8 67 1.8E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 SUPERFAMILY SSF46785 3 71 1.12E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 Gene3D G3DSA:1.10.10.10 3 71 1.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.5E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.5E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS04115 9f87e31964280e2d4787aa6721f2aafa 359 PANTHER PTHR30146 22 355 1.8E-72 T 22-04-2016 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 Pfam PF00171 Aldehyde dehydrogenase family 35 277 2.6E-13 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 412 37.156 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 Gene3D G3DSA:3.40.309.10 222 370 1.0E-37 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 PANTHER PTHR11063:SF8 1 413 1.1E-155 T 22-04-2016 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 319 341 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 402 1.6E-134 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 PANTHER PTHR11063 1 413 1.1E-155 T 22-04-2016 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 Gene3D G3DSA:3.40.605.10 2 220 6.4E-89 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 Gene3D G3DSA:3.40.605.10 371 412 6.4E-89 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 SUPERFAMILY SSF53720 2 412 1.44E-105 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LMES_RS01375 d447c22144a6b0c9be319670fdb5f164 413 PIRSF PIRSF000151 1 413 4.2E-162 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 Gene3D G3DSA:3.30.1330.80 102 198 9.5E-37 T 22-04-2016 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 Pfam PF03306 Alpha-acetolactate decarboxylase 4 222 7.0E-69 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 PANTHER PTHR35524 1 236 2.5E-57 T 22-04-2016 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 PIRSF PIRSF001332 1 236 2.4E-66 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 SUPERFAMILY SSF117856 3 235 3.24E-68 T 22-04-2016 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 Gene3D G3DSA:3.30.1330.80 2 101 1.4E-25 T 22-04-2016 LMES_RS04610 c954fcf890a177376251ea8b2dc2da68 236 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 3 235 1.4E-60 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 LMES_RS01850 c453dae833a9f2d7848cd97710fc56df 712 PANTHER PTHR10342 238 590 1.0E-112 T 22-04-2016 LMES_RS01850 c453dae833a9f2d7848cd97710fc56df 712 PANTHER PTHR10342:SF214 238 590 1.0E-112 T 22-04-2016 LMES_RS01850 c453dae833a9f2d7848cd97710fc56df 712 SUPERFAMILY SSF53649 264 648 2.8E-77 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LMES_RS01850 c453dae833a9f2d7848cd97710fc56df 712 Gene3D G3DSA:3.40.720.10 266 574 6.0E-36 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LMES_RS01850 c453dae833a9f2d7848cd97710fc56df 712 PIRSF PIRSF005091 12 650 5.4E-181 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 LMES_RS01850 c453dae833a9f2d7848cd97710fc56df 712 Pfam PF00884 Sulfatase 266 560 1.2E-34 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 SUPERFAMILY SSF46785 17 87 4.67E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 Gene3D G3DSA:3.40.640.10 143 346 1.2E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 Gene3D G3DSA:1.10.10.10 16 83 1.3E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 82 6.7E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 PANTHER PTHR11751 140 450 6.6E-35 T 22-04-2016 LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 SUPERFAMILY SSF53383 117 450 8.25E-46 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 SMART SM00345 23 82 2.3E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 Pfam PF00155 Aminotransferase class I and II 128 325 9.1E-14 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS08535 42ce7d3a75886f8163cbd7af490562d8 453 PANTHER PTHR11751:SF294 140 450 6.6E-35 T 22-04-2016 LMES_RS08830 71f4d4bdf338b4c86701b3dbc1d2b78f 308 PANTHER PTHR11835 1 234 4.2E-12 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LMES_RS08830 71f4d4bdf338b4c86701b3dbc1d2b78f 308 PANTHER PTHR11835:SF49 1 234 4.2E-12 T 22-04-2016 LMES_RS08830 71f4d4bdf338b4c86701b3dbc1d2b78f 308 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 243 3.8E-27 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS08830 71f4d4bdf338b4c86701b3dbc1d2b78f 308 Gene3D G3DSA:3.40.718.10 2 269 5.8E-33 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS08830 71f4d4bdf338b4c86701b3dbc1d2b78f 308 SUPERFAMILY SSF53659 2 260 3.29E-34 T 22-04-2016 LMES_RS08830 71f4d4bdf338b4c86701b3dbc1d2b78f 308 SMART SM01329 3 300 5.6E-7 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS05465 980088c2780ea86491010a5a03d79363 301 SUPERFAMILY SSF53850 97 293 7.78E-8 T 22-04-2016 LMES_RS05465 980088c2780ea86491010a5a03d79363 301 SUPERFAMILY SSF46785 1 79 1.47E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05465 980088c2780ea86491010a5a03d79363 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS05465 980088c2780ea86491010a5a03d79363 301 Gene3D G3DSA:1.10.10.10 1 78 3.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05465 980088c2780ea86491010a5a03d79363 301 PANTHER PTHR30126 1 300 6.6E-35 T 22-04-2016 LMES_RS05465 980088c2780ea86491010a5a03d79363 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS05465 980088c2780ea86491010a5a03d79363 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS05465 980088c2780ea86491010a5a03d79363 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS03540 fe384d92a4316ab6f28d56cc0b58be89 378 PANTHER PTHR11516:SF1 21 369 1.1E-101 T 22-04-2016 LMES_RS03540 fe384d92a4316ab6f28d56cc0b58be89 378 Pfam PF00676 Dehydrogenase E1 component 58 351 2.6E-80 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 LMES_RS03540 fe384d92a4316ab6f28d56cc0b58be89 378 SUPERFAMILY SSF52518 25 373 3.4E-91 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03540 fe384d92a4316ab6f28d56cc0b58be89 378 Gene3D G3DSA:3.40.50.970 15 371 2.7E-106 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03540 fe384d92a4316ab6f28d56cc0b58be89 378 PANTHER PTHR11516 21 369 1.1E-101 T 22-04-2016 LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 Gene3D G3DSA:1.10.3210.10 3 193 1.1E-58 T 22-04-2016 IPR006674 HD domain LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 Pfam PF01966 HD domain 24 137 3.6E-14 T 22-04-2016 IPR006674 HD domain LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 17 188 5.1E-42 T 22-04-2016 IPR005249 Conserved hypothetical protein CHP00488 LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 SMART SM00471 20 148 1.6E-6 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 TIGRFAM TIGR00277 HDIG: HDIG domain 25 115 4.5E-8 T 22-04-2016 IPR006675 HDIG domain LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 PANTHER PTHR35795 1 190 3.4E-52 T 22-04-2016 LMES_RS07765 e1af9894616499d589f5797c888b3cb2 194 SUPERFAMILY SSF109604 2 192 2.43E-33 T 22-04-2016 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 610 626 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 7 17 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 476 485 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 244 262 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 197 210 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 378 398 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 182 197 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 314 330 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 594 606 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR01159 DNA gyrase subunit B signature 364 378 4.81E-54 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Pfam PF01751 Toprim domain 425 535 1.3E-16 T 22-04-2016 IPR006171 Toprim domain LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Pfam PF00204 DNA gyrase B 224 394 9.9E-56 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 176 5.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 SMART SM00433 36 634 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 36 51 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 510 527 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 573 589 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 492 508 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 270 283 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 530 542 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 71 84 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 426 440 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PRINTS PR00418 DNA topoisomerase II family signature 113 127 8.53E-65 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PANTHER PTHR10169 3 633 0.0 T 22-04-2016 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 630 1.5E-26 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Gene3D G3DSA:3.30.565.10 7 212 1.7E-81 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 SUPERFAMILY SSF54211 224 394 1.14E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 4 641 0.0 T 22-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Gene3D G3DSA:3.30.230.10 223 394 1.6E-61 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 SMART SM00387 32 177 2.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Gene3D G3DSA:3.40.50.670 411 622 1.1E-82 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 SUPERFAMILY SSF56719 405 636 9.42E-81 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 PANTHER PTHR10169:SF44 3 633 0.0 T 22-04-2016 LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 SUPERFAMILY SSF55874 6 219 1.49E-64 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05940 62cd12fc19f21f93404ce67711d667d6 687 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 5 639 46.431 T 22-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS02320 fb731daac10570b5595f5aa0312d9204 277 PANTHER PTHR20858:SF17 3 265 6.1E-105 T 22-04-2016 LMES_RS02320 fb731daac10570b5595f5aa0312d9204 277 Gene3D G3DSA:3.40.1190.20 6 261 1.0E-96 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS02320 fb731daac10570b5595f5aa0312d9204 277 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 261 4.6E-97 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LMES_RS02320 fb731daac10570b5595f5aa0312d9204 277 SUPERFAMILY SSF53613 6 265 9.67E-80 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS02320 fb731daac10570b5595f5aa0312d9204 277 PANTHER PTHR20858 3 265 6.1E-105 T 22-04-2016 LMES_RS02320 fb731daac10570b5595f5aa0312d9204 277 Pfam PF08543 Phosphomethylpyrimidine kinase 15 260 5.9E-90 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 Pfam PF07690 Major Facilitator Superfamily 5 266 4.1E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 Gene3D G3DSA:1.20.1250.20 218 389 6.7E-16 T 22-04-2016 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 Gene3D G3DSA:1.20.1250.20 5 196 2.3E-32 T 22-04-2016 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 SUPERFAMILY SSF103473 5 390 6.41E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 PANTHER PTHR23504 5 388 1.3E-44 T 22-04-2016 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 PRINTS PR01035 Tetracycline resistance protein signature 307 327 3.0E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 PRINTS PR01035 Tetracycline resistance protein signature 342 365 3.0E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 PRINTS PR01035 Tetracycline resistance protein signature 138 160 3.0E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05035 cb508b2294d680663badfe939323ba5a 399 PRINTS PR01035 Tetracycline resistance protein signature 11 27 3.0E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 PANTHER PTHR24031 2 521 1.3E-220 T 22-04-2016 LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 SUPERFAMILY SSF52540 69 354 1.51E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 SMART SM00487 20 217 6.1E-65 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 Pfam PF00271 Helicase conserved C-terminal domain 226 334 2.7E-29 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 Pfam PF00270 DEAD/DEAH box helicase 25 190 4.0E-52 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 Gene3D G3DSA:3.40.50.300 207 366 3.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 SMART SM00490 253 334 1.1E-34 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 1 525 42.661 T 22-04-2016 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 PANTHER PTHR24031:SF261 2 521 1.3E-220 T 22-04-2016 LMES_RS02165 528be99042d31ca2fefe6cae4fda4e01 528 Gene3D G3DSA:3.40.50.300 2 206 4.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09005 b5a0a20b36c33ee162672e986d9f5ab1 287 PANTHER PTHR12110 4 259 1.6E-76 T 22-04-2016 LMES_RS09005 b5a0a20b36c33ee162672e986d9f5ab1 287 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 3 282 1.3E-98 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 LMES_RS09005 b5a0a20b36c33ee162672e986d9f5ab1 287 Gene3D G3DSA:3.20.20.150 3 278 5.8E-37 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LMES_RS09005 b5a0a20b36c33ee162672e986d9f5ab1 287 SUPERFAMILY SSF51658 3 278 1.44E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LMES_RS09005 b5a0a20b36c33ee162672e986d9f5ab1 287 Pfam PF01261 Xylose isomerase-like TIM barrel 22 233 5.3E-24 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LMES_RS09005 b5a0a20b36c33ee162672e986d9f5ab1 287 PANTHER PTHR12110:SF20 4 259 1.6E-76 T 22-04-2016 LMES_RS03260 31be9c9a67762169c9e1fa14b5ad9997 264 Gene3D G3DSA:2.60.200.30 116 226 4.0E-30 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LMES_RS03260 31be9c9a67762169c9e1fa14b5ad9997 264 SUPERFAMILY SSF111331 17 259 6.67E-62 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LMES_RS03260 31be9c9a67762169c9e1fa14b5ad9997 264 Hamap MF_00361 NAD kinase [nadK]. 1 261 23.34 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LMES_RS03260 31be9c9a67762169c9e1fa14b5ad9997 264 PANTHER PTHR20275 27 256 1.7E-53 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LMES_RS03260 31be9c9a67762169c9e1fa14b5ad9997 264 Pfam PF01513 ATP-NAD kinase 32 243 3.4E-23 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LMES_RS03260 31be9c9a67762169c9e1fa14b5ad9997 264 Gene3D G3DSA:3.40.50.10330 25 115 4.5E-21 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.2E-37 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.433 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 SMART SM01387 8 88 2.4E-48 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 Pfam PF00312 Ribosomal protein S15 8 88 3.4E-35 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 SUPERFAMILY SSF47060 3 89 4.41E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 PANTHER PTHR23321 1 89 1.3E-42 T 22-04-2016 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-30 T 22-04-2016 LMES_RS07070 67c75a962b22f5ac8b008abed3b21ccc 89 Gene3D G3DSA:1.10.287.10 3 89 5.9E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 LMES_RS01985 31c60922c4046a1d60dc6eb79e5e53fa 136 Pfam PF11457 Protein of unknown function (DUF3021) 5 124 5.7E-14 T 22-04-2016 IPR021560 Protein of unknown function DUF3021 LMES_RS08930 fb7a08d9c524f83cdb02e93aefdccd16 187 Pfam PF07155 ECF-type riboflavin transporter, S component 10 176 7.1E-49 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 LMES_RS08930 fb7a08d9c524f83cdb02e93aefdccd16 187 PANTHER PTHR37815 6 187 3.2E-64 T 22-04-2016 LMES_RS08930 fb7a08d9c524f83cdb02e93aefdccd16 187 PANTHER PTHR37815:SF2 6 187 3.2E-64 T 22-04-2016 LMES_RS08930 fb7a08d9c524f83cdb02e93aefdccd16 187 Hamap MF_01572 UPF0397 protein . 8 187 24.841 T 22-04-2016 IPR022914 Protein of unknown function UPF0397 LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 Gene3D G3DSA:3.30.565.10 236 255 2.6E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 Gene3D G3DSA:3.30.565.10 300 394 2.6E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 PANTHER PTHR24421 20 402 3.9E-45 T 22-04-2016 LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 SMART SM00387 302 396 9.9E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 PANTHER PTHR24421:SF10 20 402 3.9E-45 T 22-04-2016 LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 SUPERFAMILY SSF55874 270 393 3.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 Pfam PF07730 Histidine kinase 197 263 1.1E-15 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 LMES_RS05015 601242a4a0ae07f28f9604cb01cc9611 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 394 1.0E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 492 9.2E-77 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 Gene3D G3DSA:2.40.50.140 8 147 5.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 Gene3D G3DSA:3.30.930.10 150 491 7.2E-118 T 22-04-2016 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PANTHER PTHR22594:SF4 1 495 3.7E-251 T 22-04-2016 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 Pfam PF01336 OB-fold nucleic acid binding domain 62 136 1.2E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 SUPERFAMILY SSF50249 6 147 3.43E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PANTHER PTHR22594 1 495 3.7E-251 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 494 9.8E-202 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 495 43.23 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 SUPERFAMILY SSF55681 154 493 2.49E-117 T 22-04-2016 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 2.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 2.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 2.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 2.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS01925 ae4ea9251ca0fc3ce3a53f4bc8c07632 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 2.8E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PANTHER PTHR10353:SF35 10 52 2.1E-247 T 22-04-2016 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PANTHER PTHR10353:SF35 73 486 2.1E-247 T 22-04-2016 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PANTHER PTHR10353 10 52 2.1E-247 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PANTHER PTHR10353 73 486 2.1E-247 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 Pfam PF00232 Glycosyl hydrolase family 1 9 482 2.2E-132 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 14 28 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 Gene3D G3DSA:3.20.20.80 10 485 2.0E-144 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 380 388 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 SUPERFAMILY SSF51445 7 479 1.07E-157 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 401 412 7.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 422 439 7.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 447 459 7.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 316 330 7.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04320 d98410e6a2e680592962e528c1ffc4cb 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 380 388 7.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 SUPERFAMILY SSF56784 2 269 1.23E-64 T 22-04-2016 IPR023214 HAD-like domain LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 PANTHER PTHR10000 1 270 1.6E-68 T 22-04-2016 LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 Gene3D G3DSA:3.30.1240.10 89 184 7.0E-21 T 22-04-2016 LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 219 241 - T 22-04-2016 LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 Gene3D G3DSA:3.40.50.1000 1 77 7.0E-54 T 22-04-2016 IPR023214 HAD-like domain LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 Gene3D G3DSA:3.40.50.1000 185 270 7.0E-54 T 22-04-2016 IPR023214 HAD-like domain LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 238 6.8E-29 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 265 1.6E-60 T 22-04-2016 IPR023214 HAD-like domain LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 PANTHER PTHR10000:SF16 1 270 1.6E-68 T 22-04-2016 LMES_RS08825 2a3cbbfb9d49797a5b5854353b6e9cad 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 265 4.5E-58 T 22-04-2016 IPR000150 Cof protein GO:0016787 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 Gene3D G3DSA:3.60.120.10 5 450 1.0E-152 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 PANTHER PTHR11236:SF9 4 449 2.0E-202 T 22-04-2016 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 SUPERFAMILY SSF56322 6 449 3.66E-145 T 22-04-2016 IPR005801 ADC synthase GO:0009058 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 PANTHER PTHR11236 4 449 2.0E-202 T 22-04-2016 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 Pfam PF00425 chorismate binding enzyme 191 443 3.6E-93 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 PRINTS PR00095 Anthranilate synthase component I signature 400 414 4.1E-21 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 PRINTS PR00095 Anthranilate synthase component I signature 385 399 4.1E-21 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 PRINTS PR00095 Anthranilate synthase component I signature 291 304 4.1E-21 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 PRINTS PR00095 Anthranilate synthase component I signature 305 318 4.1E-21 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 142 1.8E-33 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS05135 9ecdacdf770cb23d3525a2bce42b73b0 454 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 9 450 4.9E-174 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 PANTHER PTHR24220:SF327 6 244 6.0E-131 T 22-04-2016 LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 Gene3D G3DSA:3.40.50.300 4 241 5.6E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 PANTHER PTHR24220 6 244 6.0E-131 T 22-04-2016 LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 PIRSF PIRSF039085 1 244 2.9E-107 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 SUPERFAMILY SSF52540 4 239 1.25E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 Pfam PF00005 ABC transporter 21 169 1.3E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS03015 338ad18c59ac7c80c8678c583339916a 244 SMART SM00382 29 217 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03180 fd37fe263d5b9ff1b2e2e7a8934fb6d0 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LMES_RS03180 fd37fe263d5b9ff1b2e2e7a8934fb6d0 457 PIRSF PIRSF006060 1 452 7.2E-54 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS03180 fd37fe263d5b9ff1b2e2e7a8934fb6d0 457 PANTHER PTHR11785:SF29 12 451 3.0E-124 T 22-04-2016 LMES_RS03180 fd37fe263d5b9ff1b2e2e7a8934fb6d0 457 Pfam PF00324 Amino acid permease 19 436 4.0E-88 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LMES_RS03180 fd37fe263d5b9ff1b2e2e7a8934fb6d0 457 PANTHER PTHR11785 12 451 3.0E-124 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 Pfam PF00293 NUDIX domain 3 126 6.2E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 PANTHER PTHR22769 4 151 3.1E-16 T 22-04-2016 LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 Gene3D G3DSA:3.90.79.10 10 155 1.7E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 PRINTS PR00502 NUDIX hydrolase family signature 35 49 2.5E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 PRINTS PR00502 NUDIX hydrolase family signature 49 64 2.5E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LMES_RS04060 b3278330d947fa5985f7d1e89ab66d33 166 SUPERFAMILY SSF55811 5 147 2.03E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 SUPERFAMILY SSF75625 3 239 3.27E-87 T 22-04-2016 IPR029072 YebC-like LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 Gene3D G3DSA:3.30.70.980 136 207 6.6E-27 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 Pfam PF01709 Transcriptional regulator 5 238 1.5E-89 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 Gene3D G3DSA:3.30.1270.10 81 135 4.0E-31 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 Gene3D G3DSA:3.30.1270.10 214 240 4.0E-31 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 1.9E-89 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 Gene3D G3DSA:1.10.10.200 1 78 4.1E-34 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 33.423 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS06435 87420cc7c5f7644f6c08e6ec12b9b9c4 240 PANTHER PTHR12532 1 237 6.1E-104 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 PANTHER PTHR23416 66 233 3.2E-48 T 22-04-2016 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 233 1.4E-104 T 22-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 232 42.698 T 22-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 171 199 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Gene3D G3DSA:2.160.10.10 86 222 3.5E-48 T 22-04-2016 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Gene3D G3DSA:3.30.70.250 2 84 1.9E-27 T 22-04-2016 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 162 197 1.3E-11 T 22-04-2016 IPR001451 Hexapeptide repeat LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 115 5.9E-4 T 22-04-2016 IPR001451 Hexapeptide repeat LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 153 7.6E-10 T 22-04-2016 IPR001451 Hexapeptide repeat LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 PANTHER PTHR23416:SF50 66 233 3.2E-48 T 22-04-2016 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 5 83 1.4E-23 T 22-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 LMES_RS03205 024e1f09f6bb592fe9597f7478695590 233 SUPERFAMILY SSF51161 85 224 3.19E-50 T 22-04-2016 IPR011004 Trimeric LpxA-like LMES_RS05950 2a3ea1e8ce5283a051e0d0824683bb8e 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.3E-58 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LMES_RS05950 2a3ea1e8ce5283a051e0d0824683bb8e 149 PANTHER PTHR10472 2 146 8.6E-73 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LMES_RS05950 2a3ea1e8ce5283a051e0d0824683bb8e 149 Gene3D G3DSA:3.50.80.10 1 145 3.1E-60 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain LMES_RS05950 2a3ea1e8ce5283a051e0d0824683bb8e 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.236 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LMES_RS05950 2a3ea1e8ce5283a051e0d0824683bb8e 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.3E-54 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LMES_RS05950 2a3ea1e8ce5283a051e0d0824683bb8e 149 SUPERFAMILY SSF69500 1 145 6.41E-58 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain LMES_RS03555 5445946391872c18614d0581d01052a0 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 458 1.2E-29 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 SUPERFAMILY SSF51905 8 340 1.88E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PANTHER PTHR22912:SF146 1 462 1.5E-178 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PIRSF PIRSF000350 2 462 4.6E-92 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 3.16E-39 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 3.16E-39 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 3.16E-39 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 159 3.16E-39 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 3.16E-39 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 Gene3D G3DSA:3.50.50.60 9 144 2.0E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 Gene3D G3DSA:3.30.390.30 349 463 1.6E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 153 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 346 367 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 3.25E-70 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 Gene3D G3DSA:3.50.50.60 145 338 2.2E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 469 3.3E-156 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 LMES_RS03555 5445946391872c18614d0581d01052a0 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 3.4E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03555 5445946391872c18614d0581d01052a0 469 PANTHER PTHR22912 1 462 1.5E-178 T 22-04-2016 LMES_RS03555 5445946391872c18614d0581d01052a0 469 SUPERFAMILY SSF55424 349 468 2.06E-33 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PANTHER PTHR30050:SF2 6 447 1.4E-160 T 22-04-2016 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Gene3D G3DSA:1.10.1750.10 345 445 1.7E-35 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Gene3D G3DSA:1.10.8.60 277 344 1.6E-21 T 22-04-2016 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 8 445 29.549 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 SMART SM00382 141 277 4.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 SMART SM00760 354 423 1.1E-34 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Gene3D G3DSA:3.40.50.300 105 274 5.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 269 2.2E-42 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 174 188 2.2E-42 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 208 222 2.2E-42 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 142 162 2.2E-42 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 404 423 2.2E-42 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 SUPERFAMILY SSF52540 108 319 2.19E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 PANTHER PTHR30050 6 447 1.4E-160 T 22-04-2016 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 SUPERFAMILY SSF48295 341 445 2.14E-33 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 ProSitePatterns PS01008 DnaA protein signature. 404 423 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 355 423 2.0E-28 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Pfam PF11638 DnaA N-terminal domain 8 58 2.3E-8 T 22-04-2016 IPR024633 DnaA N-terminal domain LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 11 444 6.7E-143 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LMES_RS00005 97dfb79b464eef1d243066271987d23c 448 Pfam PF00308 Bacterial dnaA protein 109 324 2.9E-82 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA LMES_RS05515 1d3fe9fd8a3b976e08b4b6d2a58c5eee 191 Gene3D G3DSA:1.10.357.10 4 157 1.2E-16 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS05515 1d3fe9fd8a3b976e08b4b6d2a58c5eee 191 PANTHER PTHR30055 1 132 4.5E-16 T 22-04-2016 LMES_RS05515 1d3fe9fd8a3b976e08b4b6d2a58c5eee 191 PANTHER PTHR30055:SF55 1 132 4.5E-16 T 22-04-2016 LMES_RS05515 1d3fe9fd8a3b976e08b4b6d2a58c5eee 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 1.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS05515 1d3fe9fd8a3b976e08b4b6d2a58c5eee 191 SUPERFAMILY SSF46689 4 70 1.23E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 Gene3D G3DSA:3.65.10.10 22 229 3.5E-57 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 SUPERFAMILY SSF55205 8 429 6.54E-127 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 430 2.7E-119 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 Gene3D G3DSA:3.65.10.10 230 427 1.8E-49 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 432 32.249 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 PIRSF PIRSF000505 1 433 1.5E-114 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 PANTHER PTHR21090 1 429 1.6E-161 T 22-04-2016 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 425 1.1E-115 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05100 9e5ce2681ef52d3eb0a9cd2b447cacd6 434 PANTHER PTHR21090:SF5 1 429 1.6E-161 T 22-04-2016 LMES_RS02795 e11539b754ce5db2c84f87162b7000ee 291 PANTHER PTHR34475:SF1 9 205 6.1E-27 T 22-04-2016 LMES_RS02795 e11539b754ce5db2c84f87162b7000ee 291 PANTHER PTHR34475 9 205 6.1E-27 T 22-04-2016 LMES_RS02795 e11539b754ce5db2c84f87162b7000ee 291 SUPERFAMILY SSF47413 4 76 5.94E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02795 e11539b754ce5db2c84f87162b7000ee 291 Pfam PF13413 Helix-turn-helix domain 12 73 1.1E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02795 e11539b754ce5db2c84f87162b7000ee 291 Gene3D G3DSA:1.10.260.40 8 93 3.6E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 Gene3D G3DSA:3.40.50.1240 2 213 8.1E-76 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 212 9.3E-35 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 PANTHER PTHR11931 2 213 1.9E-105 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 SUPERFAMILY SSF53254 1 213 1.94E-63 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 219 40.561 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 SMART SM00855 4 182 1.5E-26 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS07140 37984d2d3b63e388a6531c2de6c389f0 220 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 213 3.3E-80 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.0E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 Gene3D G3DSA:3.30.70.600 4 102 1.5E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 PANTHER PTHR11700 1 102 8.1E-49 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.204 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.1E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 SMART SM01403 7 101 1.4E-58 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.4E-21 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.4E-21 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.4E-21 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 SUPERFAMILY SSF54999 5 102 5.62E-39 T 22-04-2016 IPR027486 Ribosomal protein S10 domain LMES_RS00895 1b963e2d89385030ca3ecb7186db3aac 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06165 f4abba023608df3a57fd9951a5f4fcb1 211 Gene3D G3DSA:2.10.270.10 163 209 1.3E-8 T 22-04-2016 LMES_RS06165 f4abba023608df3a57fd9951a5f4fcb1 211 Gene3D G3DSA:2.10.270.10 99 162 2.8E-11 T 22-04-2016 LMES_RS06165 f4abba023608df3a57fd9951a5f4fcb1 211 Gene3D G3DSA:2.10.270.10 12 98 7.3E-12 T 22-04-2016 LMES_RS06165 f4abba023608df3a57fd9951a5f4fcb1 211 SUPERFAMILY SSF69360 13 208 1.26E-30 T 22-04-2016 LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 6 241 4.4E-44 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 SUPERFAMILY SSF75217 71 243 6.54E-45 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 SUPERFAMILY SSF88697 1 68 9.44E-7 T 22-04-2016 IPR015947 PUA-like domain LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 PANTHER PTHR30027:SF3 1 243 2.2E-60 T 22-04-2016 LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 Gene3D G3DSA:3.40.1280.10 1 243 3.7E-67 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 PANTHER PTHR30027 1 243 2.2E-60 T 22-04-2016 LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 PIRSF PIRSF015601 1 244 2.8E-47 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS05215 dc6b11d69b5bdc9c556a377ced9b06ba 245 Pfam PF04452 RNA methyltransferase 18 239 6.7E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS03840 ef2623ad267424ec9dc916de7c9f13d1 319 SUPERFAMILY SSF53590 2 313 4.32E-83 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03840 ef2623ad267424ec9dc916de7c9f13d1 319 PANTHER PTHR12304:SF4 1 316 1.6E-72 T 22-04-2016 LMES_RS03840 ef2623ad267424ec9dc916de7c9f13d1 319 PANTHER PTHR12304 1 316 1.6E-72 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LMES_RS03840 ef2623ad267424ec9dc916de7c9f13d1 319 Gene3D G3DSA:3.90.245.10 2 313 9.9E-94 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03840 ef2623ad267424ec9dc916de7c9f13d1 319 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 306 1.1E-66 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 Pfam PF01761 3-dehydroquinate synthase 68 322 1.1E-81 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 PANTHER PTHR21090 1 341 7.6E-110 T 22-04-2016 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 343 4.7E-99 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 SUPERFAMILY SSF56796 4 341 1.96E-88 T 22-04-2016 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 Gene3D G3DSA:1.20.1090.10 174 343 1.3E-45 T 22-04-2016 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 Gene3D G3DSA:3.40.50.1970 2 173 6.1E-55 T 22-04-2016 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 PIRSF PIRSF001455 3 353 5.0E-93 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LMES_RS05110 8ee9633d44835527803a02fd2035053a 354 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 354 33.809 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LMES_RS05370 a778a854cacd2fddc8126f9b6b802829 165 PANTHER PTHR31087:SF9 6 158 5.9E-24 T 22-04-2016 LMES_RS05370 a778a854cacd2fddc8126f9b6b802829 165 PANTHER PTHR31087 6 158 5.9E-24 T 22-04-2016 LMES_RS05370 a778a854cacd2fddc8126f9b6b802829 165 SUPERFAMILY SSF54518 2 154 6.02E-30 T 22-04-2016 IPR025659 Tubby C-terminal-like domain LMES_RS05370 a778a854cacd2fddc8126f9b6b802829 165 Pfam PF04525 LURP-one-related 6 148 1.2E-5 T 22-04-2016 IPR007612 LURP1-related protein domain LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 3.3E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 SUPERFAMILY SSF52172 3 128 2.7E-34 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 Gene3D G3DSA:1.10.10.10 127 227 3.8E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 PANTHER PTHR26402 5 225 6.5E-74 T 22-04-2016 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 SUPERFAMILY SSF46894 126 226 2.02E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 Gene3D G3DSA:3.40.50.2300 2 123 3.4E-31 T 22-04-2016 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 PANTHER PTHR26402:SF518 5 225 6.5E-74 T 22-04-2016 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 SMART SM00862 149 224 6.9E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 Pfam PF00072 Response regulator receiver domain 7 115 7.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS08125 9f94123dc84a4f1dd97705a69f525056 233 SMART SM00448 5 115 3.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 276 1.1E-62 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 SUPERFAMILY SSF101852 175 281 1.96E-26 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 PIRSF PIRSF006779 1 283 2.1E-81 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 PANTHER PTHR35092:SF2 2 286 9.0E-113 T 22-04-2016 LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 Gene3D G3DSA:2.40.30.90 179 281 3.5E-19 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 PANTHER PTHR35092 2 286 9.0E-113 T 22-04-2016 LMES_RS08935 63cbff2ffdb1958950d475d95c1c201b 286 SUPERFAMILY SSF102522 4 167 4.84E-53 T 22-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Pfam PF00571 CBS domain 139 196 6.3E-7 T 22-04-2016 IPR000644 CBS domain LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Pfam PF00571 CBS domain 203 258 7.9E-8 T 22-04-2016 IPR000644 CBS domain LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 SUPERFAMILY SSF161093 279 447 1.7E-42 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 SUPERFAMILY SSF158791 10 136 5.49E-27 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Gene3D G3DSA:3.10.580.10 132 264 1.0E-22 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 PANTHER PTHR11911 24 422 7.0E-36 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 SUPERFAMILY SSF54631 138 270 4.55E-30 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Gene3D G3DSA:1.10.357.20 280 450 8.9E-50 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Pfam PF03448 MgtE intracellular N domain 34 136 2.7E-23 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 PANTHER PTHR11911:SF23 24 422 7.0E-36 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 TIGRFAM TIGR00400 mgtE: magnesium transporter 16 449 3.8E-105 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 SMART SM00924 34 139 2.7E-26 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Gene3D G3DSA:1.25.60.10 4 131 3.2E-31 T 22-04-2016 LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 SMART SM00116 210 258 1.7E-6 T 22-04-2016 IPR000644 CBS domain LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 SMART SM00116 146 199 1.1 T 22-04-2016 IPR000644 CBS domain LMES_RS03270 3074d9dbc510219f0e83c4f0388ad533 454 Pfam PF01769 Divalent cation transporter 323 442 6.4E-25 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 Gene3D G3DSA:2.40.33.10 82 178 4.4E-27 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 SUPERFAMILY SSF50800 80 177 2.62E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 Gene3D G3DSA:3.20.20.60 13 81 5.9E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 Gene3D G3DSA:3.20.20.60 179 335 5.9E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 SUPERFAMILY SSF52935 333 482 1.7E-39 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 Pfam PF02887 Pyruvate kinase, alpha/beta domain 367 479 2.9E-33 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 Pfam PF00224 Pyruvate kinase, barrel domain 13 352 1.8E-146 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 Gene3D G3DSA:3.40.1380.20 336 482 3.8E-48 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PANTHER PTHR11817:SF3 14 482 4.3E-221 T 22-04-2016 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 279 303 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 304 322 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 196 210 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 68 84 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 323 339 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 254 278 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PRINTS PR01050 Pyruvate kinase family signature 227 253 1.8E-70 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 ProSitePatterns PS00110 Pyruvate kinase active site signature. 225 237 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 SUPERFAMILY SSF51621 11 83 1.61E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 SUPERFAMILY SSF51621 166 350 1.61E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 13 482 2.3E-167 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS03725 c0daa4de1391735a20419fc69b2f540f 482 PANTHER PTHR11817 14 482 4.3E-221 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 PIRSF PIRSF006809 1 430 8.9E-139 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 PANTHER PTHR10229 2 413 8.4E-134 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 PANTHER PTHR10229:SF0 2 413 8.4E-134 T 22-04-2016 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 Pfam PF13167 GTP-binding GTPase N-terminal 22 109 1.1E-32 T 22-04-2016 IPR025121 GTPase HflX, N-terminal LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 5.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 280 298 5.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 7 368 1.8E-121 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 Gene3D G3DSA:3.40.50.300 173 209 2.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 Pfam PF01926 50S ribosome-binding GTPase 201 331 3.4E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 SUPERFAMILY SSF52540 193 369 2.36E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 Gene3D G3DSA:3.40.50.300 210 370 1.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 Pfam PF16360 GTP-binding GTPase Middle Region 111 194 1.7E-21 T 22-04-2016 IPR032305 GTP-binding protein, middle domain LMES_RS08340 ad608c41d6d395d0eb6c9f4f91528c83 433 Hamap MF_00900 GTPase HflX [hflX]. 24 398 43.665 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 Pfam PF00664 ABC transporter transmembrane region 25 308 2.0E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 Gene3D G3DSA:3.40.50.300 354 582 2.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 Gene3D G3DSA:1.20.1560.10 11 334 6.8E-63 T 22-04-2016 LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 SMART SM00382 379 565 6.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 PANTHER PTHR24221:SF266 14 590 2.9E-236 T 22-04-2016 LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 PANTHER PTHR24221 14 590 2.9E-236 T 22-04-2016 LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 SUPERFAMILY SSF52540 345 590 5.65E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 SUPERFAMILY SSF90123 9 335 6.15E-63 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS01825 35b99b21c30337f0a489b207fa2f95c6 593 Pfam PF00005 ABC transporter 370 519 3.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 SUPERFAMILY SSF53187 5 186 1.14E-48 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 SUPERFAMILY SSF53187 356 441 1.14E-48 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 Gene3D G3DSA:3.40.630.10 381 441 2.9E-54 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 Gene3D G3DSA:3.40.630.10 4 196 2.9E-54 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 Pfam PF07687 Peptidase dimerisation domain 184 342 5.8E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 Gene3D G3DSA:3.30.70.360 197 353 3.3E-53 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 Pfam PF01546 Peptidase family M20/M25/M40 72 439 2.7E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 PANTHER PTHR11014:SF15 274 443 8.9E-110 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 PANTHER PTHR11014:SF15 2 254 8.9E-110 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 PANTHER PTHR11014 274 443 8.9E-110 T 22-04-2016 LMES_RS02040 2e9417fc7c191cad9335e52d681bc944 443 PANTHER PTHR11014 2 254 8.9E-110 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PANTHER PTHR19375 1 317 2.3E-150 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 Gene3D G3DSA:3.30.420.40 152 177 1.0E-31 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 Gene3D G3DSA:3.30.420.40 254 308 1.0E-31 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 Pfam PF06723 MreB/Mbl protein 3 325 3.9E-140 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 SUPERFAMILY SSF53067 140 322 8.84E-47 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 SUPERFAMILY SSF53067 3 139 7.38E-38 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 325 9.7E-131 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 Gene3D G3DSA:3.30.420.40 2 151 7.7E-41 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 Gene3D G3DSA:3.90.640.10 178 249 2.8E-27 T 22-04-2016 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 178 198 1.0E-49 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 123 142 1.0E-49 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 291 317 1.0E-49 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 60 83 1.0E-49 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 40 58 1.0E-49 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS01205 bf2dadd44fb55ffa1dc758ea13afc46b 330 PANTHER PTHR19375:SF203 1 317 2.3E-150 T 22-04-2016 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 5.9E-12 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 5.9E-12 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 5.9E-12 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 SUPERFAMILY SSF51230 75 149 2.5E-22 T 22-04-2016 IPR011053 Single hybrid motif LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 3 149 3.7E-36 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 Gene3D G3DSA:2.40.50.100 73 149 3.7E-26 T 22-04-2016 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 106 123 - T 22-04-2016 IPR001882 Biotin-binding site LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 PANTHER PTHR23151 3 152 5.2E-26 T 22-04-2016 LMES_RS01475 4769c3914f2381d1d0be3ae9368c34d0 152 Pfam PF00364 Biotin-requiring enzyme 76 149 6.0E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LMES_RS01980 10a09f24dd83a6df90c1260d891dc0b0 155 Pfam PF04397 LytTr DNA-binding domain 50 146 8.7E-16 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LMES_RS01980 10a09f24dd83a6df90c1260d891dc0b0 155 Gene3D G3DSA:2.40.50.40 41 110 3.2E-12 T 22-04-2016 LMES_RS01980 10a09f24dd83a6df90c1260d891dc0b0 155 SMART SM00850 49 147 2.6E-20 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 SUPERFAMILY SSF46557 5 80 1.83E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 87 159 2.7E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 1.8E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 PANTHER PTHR30437 1 158 1.5E-53 T 22-04-2016 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 SUPERFAMILY SSF54534 87 158 5.1E-16 T 22-04-2016 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 7.4E-49 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 Gene3D G3DSA:1.10.287.180 5 77 1.9E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 Gene3D G3DSA:3.10.50.30 81 158 5.1E-23 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 159 28.012 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LMES_RS02255 7dfddc355f9ded76ed2a1be4cee02cc2 160 PIRSF PIRSF006092 1 160 2.3E-43 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LMES_RS09245 d63d50774645e013258f808f5d89366b 280 SUPERFAMILY SSF47413 9 61 4.74E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS09245 d63d50774645e013258f808f5d89366b 280 SMART SM00530 6 60 0.0091 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS09245 d63d50774645e013258f808f5d89366b 280 SUPERFAMILY SSF140663 155 227 2.88E-6 T 22-04-2016 IPR023203 TTHA0068-like domain LMES_RS09245 d63d50774645e013258f808f5d89366b 280 Gene3D G3DSA:1.10.260.40 10 62 5.2E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS09245 d63d50774645e013258f808f5d89366b 280 Gene3D G3DSA:1.10.3450.10 157 228 5.8E-5 T 22-04-2016 IPR023203 TTHA0068-like domain LMES_RS09290 a4ee397d904c240f2548f2ade5d9ee29 297 PANTHER PTHR23024:SF202 32 284 3.1E-33 T 22-04-2016 LMES_RS09290 a4ee397d904c240f2548f2ade5d9ee29 297 Pfam PF07859 alpha/beta hydrolase fold 77 275 1.5E-11 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LMES_RS09290 a4ee397d904c240f2548f2ade5d9ee29 297 Gene3D G3DSA:3.40.50.1820 22 293 2.9E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS09290 a4ee397d904c240f2548f2ade5d9ee29 297 PANTHER PTHR23024 32 284 3.1E-33 T 22-04-2016 LMES_RS09290 a4ee397d904c240f2548f2ade5d9ee29 297 SUPERFAMILY SSF53474 16 295 4.47E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Gene3D G3DSA:3.30.300.20 201 278 2.1E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Gene3D G3DSA:2.40.50.140 130 200 1.8E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 SUPERFAMILY SSF54814 281 346 7.85E-16 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 365 28.592 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 PANTHER PTHR22648 1 349 4.4E-139 T 22-04-2016 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Pfam PF13184 NusA-like KH domain 232 299 5.7E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 SUPERFAMILY SSF50249 134 201 2.03E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Pfam PF08529 NusA N-terminal domain 4 126 2.0E-38 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Gene3D G3DSA:3.30.300.20 280 348 1.7E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 345 3.3E-123 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 SUPERFAMILY SSF69705 1 127 1.96E-38 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 PANTHER PTHR22648:SF0 1 349 4.4E-139 T 22-04-2016 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 SUPERFAMILY SSF54814 203 278 2.94E-28 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 SMART SM00316 135 202 8.1E-4 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS05910 95c24ad2c506cded9797cc4801efbb15 365 Gene3D G3DSA:3.30.1480.10 1 126 1.5E-42 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 SUPERFAMILY SSF55681 7 285 7.21E-126 T 22-04-2016 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PANTHER PTHR30075 6 293 1.8E-217 T 22-04-2016 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 286 55.417 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 3.6E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 3.6E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 3.6E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 3.6E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 3.6E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 3.6E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 284 4.5E-139 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 Gene3D G3DSA:1.20.58.180 210 291 2.1E-35 T 22-04-2016 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 Gene3D G3DSA:3.30.930.10 2 208 4.3E-96 T 22-04-2016 LMES_RS05250 165ff7a0c445aa7c850d1368b20f51c1 313 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 293 1.5E-144 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 PANTHER PTHR30218:SF0 9 701 3.5E-296 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Gene3D G3DSA:3.30.870.10 499 678 9.6E-67 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Gene3D G3DSA:3.30.1840.10 113 299 5.3E-55 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 SUPERFAMILY SSF56024 499 676 7.18E-65 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 9 676 8.5E-270 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Hamap MF_00347 Polyphosphate kinase [ppk]. 7 679 30.815 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Pfam PF13089 Polyphosphate kinase N-terminal domain 10 115 2.9E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 SUPERFAMILY SSF56024 327 494 1.95E-55 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 SUPERFAMILY SSF143724 115 313 2.16E-49 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 SUPERFAMILY SSF140356 7 109 2.35E-34 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Pfam PF02503 Polyphosphate kinase middle domain 125 318 2.9E-53 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 PIRSF PIRSF015589 1 697 8.5E-255 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 PANTHER PTHR30218 9 701 3.5E-296 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Gene3D G3DSA:3.30.870.10 326 498 2.7E-73 T 22-04-2016 LMES_RS01125 6986ce69ecfea9aacf9757f96b6f4607 710 Pfam PF13090 Polyphosphate kinase C-terminal domain 329 675 9.7E-152 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 SMART SM00490 302 385 7.9E-8 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 Pfam PF00271 Helicase conserved C-terminal domain 281 384 8.6E-12 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 SMART SM00487 82 264 9.0E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 Gene3D G3DSA:3.40.50.300 79 235 8.8E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 Gene3D G3DSA:3.40.50.300 277 409 3.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 SUPERFAMILY SSF52540 104 394 1.58E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01140 9ea0e05ff3b84de9131901dbf2de7e2b 426 Pfam PF04851 Type III restriction enzyme, res subunit 85 233 1.3E-7 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 Pfam PF07690 Major Facilitator Superfamily 11 401 3.6E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 SUPERFAMILY SSF103473 241 408 1.44E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 SUPERFAMILY SSF103473 2 187 1.44E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 Gene3D G3DSA:1.20.1250.20 3 177 1.3E-22 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 PANTHER PTHR23501:SF7 2 466 2.9E-106 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 5 429 1.8E-73 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 Gene3D G3DSA:1.20.1250.20 258 413 2.0E-18 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 Gene3D G3DSA:1.20.1250.20 484 507 2.0E-18 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 130 154 1.5E-9 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 295 319 1.5E-9 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 69 91 1.5E-9 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 PRINTS PR01036 Tetracycline resistance protein TetB signature 9 33 1.5E-9 T 22-04-2016 LMES_RS09065 60e1b526877e649a917c75f89b642fe3 510 PANTHER PTHR23501 2 466 2.9E-106 T 22-04-2016 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 PANTHER PTHR11019:SF11 41 284 2.3E-29 T 22-04-2016 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 SMART SM00342 193 276 8.8E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 PANTHER PTHR11019 41 284 2.3E-29 T 22-04-2016 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 SUPERFAMILY SSF46689 183 227 9.86E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 Gene3D G3DSA:1.10.10.60 230 280 7.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 Pfam PF12833 Helix-turn-helix domain 199 278 9.9E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 Pfam PF02311 AraC-like ligand binding domain 20 151 3.7E-17 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 Gene3D G3DSA:1.10.10.60 182 229 4.9E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 SUPERFAMILY SSF46689 229 280 8.51E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 SUPERFAMILY SSF51215 6 159 1.57E-24 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS05700 2de27d0df0b4e9ab89d70e9e27cfdf74 309 Gene3D G3DSA:2.60.120.280 9 159 2.5E-27 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS02785 2454a63d7dbd592b2c377415e2cfeaf4 421 Gene3D G3DSA:3.30.830.10 244 410 1.2E-27 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LMES_RS02785 2454a63d7dbd592b2c377415e2cfeaf4 421 Pfam PF05193 Peptidase M16 inactive domain 185 357 1.5E-22 T 22-04-2016 IPR007863 Peptidase M16, C-terminal LMES_RS02785 2454a63d7dbd592b2c377415e2cfeaf4 421 SUPERFAMILY SSF63411 6 223 4.22E-21 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LMES_RS02785 2454a63d7dbd592b2c377415e2cfeaf4 421 Gene3D G3DSA:3.30.830.10 2 229 5.8E-69 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LMES_RS02785 2454a63d7dbd592b2c377415e2cfeaf4 421 PANTHER PTHR11851 105 409 6.0E-26 T 22-04-2016 LMES_RS02785 2454a63d7dbd592b2c377415e2cfeaf4 421 SUPERFAMILY SSF63411 250 415 2.07E-30 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 SUPERFAMILY SSF53328 3 205 1.44E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 308 6.8E-88 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 Gene3D G3DSA:3.10.25.10 213 306 8.0E-21 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 Pfam PF00551 Formyl transferase 5 181 3.2E-34 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 SUPERFAMILY SSF50486 219 310 7.85E-19 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 3 308 31.716 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 PANTHER PTHR11138 3 304 1.3E-92 T 22-04-2016 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 Pfam PF02911 Formyl transferase, C-terminal domain 207 305 5.4E-20 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06705 28f9c1eed085a474f0211e69ec86fb19 321 Gene3D G3DSA:3.40.50.170 3 207 1.3E-63 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 PANTHER PTHR11014 1 192 2.7E-54 T 22-04-2016 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 PANTHER PTHR11014 260 471 2.7E-54 T 22-04-2016 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 Gene3D G3DSA:3.30.70.360 285 378 4.4E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 SUPERFAMILY SSF55031 188 377 2.24E-51 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 15 464 1.6E-157 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 Gene3D G3DSA:3.40.630.10 4 188 1.6E-63 T 22-04-2016 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 Gene3D G3DSA:3.40.630.10 385 469 1.6E-63 T 22-04-2016 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 118 156 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 SUPERFAMILY SSF53187 386 468 2.1E-62 T 22-04-2016 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 SUPERFAMILY SSF53187 2 188 2.1E-62 T 22-04-2016 LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 Gene3D G3DSA:3.30.70.360 206 284 2.3E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS06780 730139857051c729b3a6c394ab637d8e 471 Pfam PF01546 Peptidase family M20/M25/M40 86 465 3.0E-29 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS02425 066c37bf55f06e5fcd07b44faf5f0899 161 SUPERFAMILY SSF51261 5 153 1.29E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif LMES_RS02425 066c37bf55f06e5fcd07b44faf5f0899 161 PANTHER PTHR30175 10 107 1.8E-32 T 22-04-2016 LMES_RS02425 066c37bf55f06e5fcd07b44faf5f0899 161 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 14 132 1.7E-36 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS02425 066c37bf55f06e5fcd07b44faf5f0899 161 Gene3D G3DSA:2.70.70.10 6 153 3.3E-54 T 22-04-2016 LMES_RS02425 066c37bf55f06e5fcd07b44faf5f0899 161 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 13 134 8.7E-47 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS02425 066c37bf55f06e5fcd07b44faf5f0899 161 PANTHER PTHR30175:SF6 10 107 1.8E-32 T 22-04-2016 LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 SUPERFAMILY SSF56042 171 338 3.59E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 SUPERFAMILY SSF55326 5 167 5.58E-44 T 22-04-2016 LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 PANTHER PTHR10520 1 330 7.5E-147 T 22-04-2016 LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 Gene3D G3DSA:3.30.1330.10 21 167 2.8E-50 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 5 340 39.935 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 338 1.5E-31 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 Gene3D G3DSA:3.90.650.10 171 338 6.7E-56 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 330 2.8E-117 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03485 c6db4f1acb28c7d7e3f8619c02f55559 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 65 161 7.1E-14 T 22-04-2016 IPR016188 PurM-like, N-terminal domain LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 PANTHER PTHR30514 4 259 9.0E-60 T 22-04-2016 LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 PANTHER PTHR30514:SF1 4 259 9.0E-60 T 22-04-2016 LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 SUPERFAMILY SSF46689 2 75 6.27E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 76 1.6E-16 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 Gene3D G3DSA:1.10.10.10 2 77 3.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 Gene3D G3DSA:3.40.50.10490 108 281 2.7E-36 T 22-04-2016 LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 Pfam PF01380 SIS domain 129 257 3.2E-20 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LMES_RS02640 44b78307e3382a01494afaa142dbfb17 284 SUPERFAMILY SSF53697 94 281 4.06E-41 T 22-04-2016 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 12 107 5.2E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PANTHER PTHR22855 13 266 5.7E-69 T 22-04-2016 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 72 90 3.8E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 128 141 3.8E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 165 3.8E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 93 109 3.8E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 47 58 3.8E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 125 3.8E-31 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 Gene3D G3DSA:3.90.226.10 18 228 1.3E-43 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 PANTHER PTHR22855:SF42 13 266 5.7E-69 T 22-04-2016 LMES_RS01495 965f6d81c0efb273ad9f505283f30de2 267 SUPERFAMILY SSF52096 14 266 1.16E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS02735 0f0392b8cf78964c2c9169738466e1a4 380 Pfam PF07537 CamS sex pheromone cAM373 precursor 62 372 1.3E-109 T 22-04-2016 IPR011426 CamS sex pheromone cAM373 LMES_RS02735 0f0392b8cf78964c2c9169738466e1a4 380 Gene3D G3DSA:3.10.570.10 58 380 5.0E-117 T 22-04-2016 LMES_RS02735 0f0392b8cf78964c2c9169738466e1a4 380 PIRSF PIRSF012509 7 380 2.1E-107 T 22-04-2016 IPR011426 CamS sex pheromone cAM373 LMES_RS02735 0f0392b8cf78964c2c9169738466e1a4 380 PANTHER PTHR41246 7 380 4.1E-53 T 22-04-2016 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PANTHER PTHR22807 24 446 1.4E-109 T 22-04-2016 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 Gene3D G3DSA:3.40.50.150 240 446 8.4E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 Pfam PF01029 NusB family 10 131 6.1E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 Gene3D G3DSA:1.10.940.10 8 158 1.8E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 SUPERFAMILY SSF53335 142 446 1.31E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 12 446 1.4E-105 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 SUPERFAMILY SSF48013 9 132 2.75E-30 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 378 394 4.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 429 446 4.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 244 4.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 260 270 4.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 328 340 4.2E-29 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 256 445 1.5E-56 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 PANTHER PTHR22807:SF30 24 446 1.4E-109 T 22-04-2016 LMES_RS06700 bc4ab4b398834815042ca3629e48d981 448 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 327 338 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 ProSitePatterns PS01347 MraY family signature 1. 45 57 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 PANTHER PTHR22926:SF5 1 319 1.4E-86 T 22-04-2016 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 PANTHER PTHR22926 1 319 1.4E-86 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 320 18.83 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 15 317 9.6E-71 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 45 57 8.5E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 Pfam PF00953 Glycosyl transferase family 4 81 246 1.0E-33 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06620 0e96581759265870a4573f17b9cdca7b 320 ProSitePatterns PS01348 MraY family signature 2. 166 177 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS00490 69f3b18bb31470bbee8c2c5895ed4178 444 SUPERFAMILY SSF103378 12 416 3.27E-59 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 LMES_RS00490 69f3b18bb31470bbee8c2c5895ed4178 444 PANTHER PTHR16943:SF8 1 410 9.2E-63 T 22-04-2016 LMES_RS00490 69f3b18bb31470bbee8c2c5895ed4178 444 Pfam PF03972 MmgE/PrpD family 11 412 1.4E-58 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 LMES_RS00490 69f3b18bb31470bbee8c2c5895ed4178 444 PANTHER PTHR16943 1 410 9.2E-63 T 22-04-2016 IPR005656 MmgE/PrpD GO:0016829 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 TIGRFAM TIGR01178 ade: adenine deaminase 9 548 1.2E-164 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 Pfam PF13382 Adenine deaminase C-terminal domain 382 544 2.8E-59 T 22-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 SUPERFAMILY SSF51556 59 305 3.33E-32 T 22-04-2016 IPR032466 Metal-dependent hydrolase LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 SUPERFAMILY SSF51338 6 59 9.1E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 SUPERFAMILY SSF51338 307 337 9.1E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 PANTHER PTHR11113 375 543 2.5E-157 T 22-04-2016 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 PANTHER PTHR11113 9 340 2.5E-157 T 22-04-2016 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 Hamap MF_01518 Adenine deaminase [ade]. 6 548 35.116 T 22-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 PANTHER PTHR11113:SF2 375 543 2.5E-157 T 22-04-2016 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 PANTHER PTHR11113:SF2 9 340 2.5E-157 T 22-04-2016 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 Gene3D G3DSA:2.30.40.10 7 89 1.3E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 Gene3D G3DSA:2.30.40.10 249 343 4.6E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS03280 1387da7a28e205c8f74a303e59fed06f 551 Pfam PF01979 Amidohydrolase family 55 335 6.7E-26 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 277 35.089 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PANTHER PTHR22855 1 280 5.4E-119 T 22-04-2016 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 Pfam PF01039 Carboxyl transferase domain 89 238 1.3E-16 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 Gene3D G3DSA:3.90.226.10 22 277 2.6E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PANTHER PTHR22855:SF17 1 280 5.4E-119 T 22-04-2016 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 SUPERFAMILY SSF52096 30 275 6.53E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 247 256 9.3E-34 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 225 236 9.3E-34 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 159 177 9.3E-34 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 125 139 9.3E-34 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS01490 8125479b3b4c745567f976717f9d3ef6 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 196 213 9.3E-34 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 Gene3D G3DSA:3.40.50.300 136 285 6.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 Gene3D G3DSA:3.40.50.300 4 100 6.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 PANTHER PTHR19211 1 497 1.1E-204 T 22-04-2016 LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 SUPERFAMILY SSF52540 310 504 2.66E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 Pfam PF12848 ABC transporter 227 312 1.0E-23 T 22-04-2016 IPR032781 ABC-transporter extension domain LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 PANTHER PTHR19211:SF65 1 497 1.1E-204 T 22-04-2016 LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 Gene3D G3DSA:3.40.50.300 321 504 1.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 Pfam PF00005 ABC transporter 20 188 2.4E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 Pfam PF00005 ABC transporter 337 467 8.6E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 SMART SM00382 346 512 2.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 SMART SM00382 28 249 8.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 SUPERFAMILY SSF52540 4 235 2.52E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08635 0a378ce1e703a3a56458bc6323c96a87 518 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 Gene3D G3DSA:3.40.50.510 1 138 1.5E-46 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 Pfam PF03610 PTS system fructose IIA component 4 112 8.0E-32 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 SUPERFAMILY SSF52728 153 312 1.24E-53 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 Pfam PF03830 PTS system sorbose subfamily IIB component 154 301 4.5E-50 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 SUPERFAMILY SSF53062 1 128 2.22E-35 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 PANTHER PTHR33799:SF7 2 314 2.5E-166 T 22-04-2016 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 Gene3D G3DSA:3.40.35.10 153 312 9.1E-63 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 105 3.5E-32 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS07920 e9330918c2c98512312f3c6b110fea8e 314 PANTHER PTHR33799 2 314 2.5E-166 T 22-04-2016 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 Pfam PF01430 Hsp33 protein 3 281 1.8E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 PIRSF PIRSF005261 1 293 1.0E-57 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 Gene3D G3DSA:3.90.1280.10 241 292 6.5E-15 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 292 30.521 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 Gene3D G3DSA:3.55.30.10 3 232 1.0E-69 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 PANTHER PTHR30111:SF1 1 296 2.8E-71 T 22-04-2016 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 PANTHER PTHR30111 1 296 2.8E-71 T 22-04-2016 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 SUPERFAMILY SSF118352 241 291 1.06E-9 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LMES_RS01920 4c421218ce2e2d74e7de88f54aa87a8b 297 SUPERFAMILY SSF64397 3 226 3.92E-60 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 SUPERFAMILY SSF53271 1 186 1.42E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 Gene3D G3DSA:3.40.50.2020 1 188 6.7E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.861 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 PANTHER PTHR11776 1 188 6.8E-77 T 22-04-2016 LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 188 2.8E-80 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 Pfam PF00156 Phosphoribosyl transferase domain 32 156 3.0E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS09345 84865fef519a6c84ee007312c90bb4e9 189 PANTHER PTHR11776:SF1 1 188 6.8E-77 T 22-04-2016 LMES_RS00020 bc5467704b33eced30a8373756696d49 374 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 344 7.1E-15 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LMES_RS00020 bc5467704b33eced30a8373756696d49 374 Gene3D G3DSA:3.40.50.300 3 168 2.5E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00020 bc5467704b33eced30a8373756696d49 374 Gene3D G3DSA:3.40.50.300 238 346 2.5E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00020 bc5467704b33eced30a8373756696d49 374 SUPERFAMILY SSF52540 244 352 1.0E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00020 bc5467704b33eced30a8373756696d49 374 SUPERFAMILY SSF52540 3 217 1.0E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00020 bc5467704b33eced30a8373756696d49 374 PANTHER PTHR32182:SF0 2 368 5.6E-78 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LMES_RS00020 bc5467704b33eced30a8373756696d49 374 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 374 102.631 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LMES_RS00020 bc5467704b33eced30a8373756696d49 374 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 366 3.8E-125 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LMES_RS00020 bc5467704b33eced30a8373756696d49 374 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LMES_RS00020 bc5467704b33eced30a8373756696d49 374 PANTHER PTHR32182 2 368 5.6E-78 T 22-04-2016 LMES_RS00020 bc5467704b33eced30a8373756696d49 374 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 5.2E-28 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 Pfam PF06827 Zinc finger found in FPG and IleRS 246 273 3.2E-10 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 SUPERFAMILY SSF57716 223 273 5.13E-16 T 22-04-2016 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 SUPERFAMILY SSF46946 133 223 3.53E-27 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 PANTHER PTHR22993:SF15 1 273 1.1E-97 T 22-04-2016 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 Gene3D G3DSA:1.10.8.50 135 273 9.7E-46 T 22-04-2016 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 SMART SM00898 2 117 6.1E-43 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 SUPERFAMILY SSF81624 2 141 9.94E-37 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 SMART SM01232 134 226 5.1E-37 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 PANTHER PTHR22993 1 273 1.1E-97 T 22-04-2016 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 Gene3D G3DSA:3.20.190.10 2 134 2.3E-35 T 22-04-2016 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 39.487 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 116 3.8E-33 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LMES_RS02525 6150d59410fa7b03fe02ece1746749ed 277 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 3.1E-92 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LMES_RS06755 fdfe17a19e2d3c983014fe859baaf8f3 381 SUPERFAMILY SSF116734 5 190 7.03E-38 T 22-04-2016 LMES_RS06755 fdfe17a19e2d3c983014fe859baaf8f3 381 PANTHER PTHR30408:SF2 19 207 2.9E-17 T 22-04-2016 LMES_RS06755 fdfe17a19e2d3c983014fe859baaf8f3 381 PANTHER PTHR30408 19 207 2.9E-17 T 22-04-2016 LMES_RS06755 fdfe17a19e2d3c983014fe859baaf8f3 381 SUPERFAMILY SSF116734 184 380 9.16E-29 T 22-04-2016 LMES_RS06755 fdfe17a19e2d3c983014fe859baaf8f3 381 Pfam PF01420 Type I restriction modification DNA specificity domain 10 167 6.1E-13 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LMES_RS06755 fdfe17a19e2d3c983014fe859baaf8f3 381 Pfam PF01420 Type I restriction modification DNA specificity domain 194 369 3.6E-6 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 PANTHER PTHR21327 5 397 8.6E-162 T 22-04-2016 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 Pfam PF00925 GTP cyclohydrolase II 214 373 5.6E-55 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 SUPERFAMILY SSF55821 4 201 4.81E-67 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 Gene3D G3DSA:3.90.870.10 3 205 1.5E-73 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 6 200 3.7E-59 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 SUPERFAMILY SSF142695 214 375 2.48E-48 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 PIRSF PIRSF001259 3 397 3.0E-125 T 22-04-2016 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 PANTHER PTHR21327:SF6 5 397 8.6E-162 T 22-04-2016 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 10 199 4.0E-67 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03965 f9405b2567c08cdcc2ca385b6aacde3d 397 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 215 396 6.6E-63 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LMES_RS06105 a2890e33d5ac2abff4bd825ab678dde2 635 SUPERFAMILY SSF53649 365 559 1.77E-10 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LMES_RS06105 a2890e33d5ac2abff4bd825ab678dde2 635 Pfam PF00884 Sulfatase 265 551 2.1E-21 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Pfam PF01588 Putative tRNA binding domain 609 699 1.7E-20 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PANTHER PTHR11946 2 658 1.1E-279 T 22-04-2016 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Pfam PF09334 tRNA synthetases class I (M) 39 404 1.0E-113 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Gene3D G3DSA:1.10.730.10 381 554 5.9E-51 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Gene3D G3DSA:2.40.50.140 593 701 6.0E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Hamap MF_01228 Methionine--tRNA ligase [metG]. 33 554 48.216 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 SUPERFAMILY SSF47323 397 564 2.43E-40 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Gene3D G3DSA:2.170.220.10 150 268 9.3E-48 T 22-04-2016 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 300 315 2.4E-31 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 54 2.4E-31 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 121 132 2.4E-31 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 73 87 2.4E-31 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 392 403 2.4E-31 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 267 278 2.4E-31 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 SUPERFAMILY SSF50249 599 701 1.79E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Gene3D G3DSA:3.40.50.620 269 377 1.7E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 Gene3D G3DSA:3.40.50.620 36 147 1.7E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 PANTHER PTHR11946:SF1 2 658 1.1E-279 T 22-04-2016 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 39 554 4.1E-168 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LMES_RS01400 21d5bbc5e73c8337360976098f869277 702 SUPERFAMILY SSF52374 36 391 2.68E-105 T 22-04-2016 LMES_RS02075 65dfaaefd78547ccef4d2d5608469b4e 325 PIRSF PIRSF007023 1 325 8.3E-61 T 22-04-2016 IPR016503 UDP-galactofuranosyltransferase GO:0016757 LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 Pfam PF00557 Metallopeptidase family M24 210 354 1.5E-26 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 PANTHER PTHR10804 132 367 1.7E-27 T 22-04-2016 LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 Pfam PF01321 Creatinase/Prolidase N-terminal domain 11 140 7.4E-16 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 Gene3D G3DSA:3.90.230.10 140 371 1.5E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 PANTHER PTHR10804:SF86 132 367 1.7E-27 T 22-04-2016 LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 SUPERFAMILY SSF53092 6 116 2.09E-18 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 SUPERFAMILY SSF55920 140 370 5.89E-45 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS08520 4a2af67413aa1f3e550ae8626c60fe95 374 Gene3D G3DSA:3.40.350.10 5 116 1.6E-21 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 PANTHER PTHR21581 38 295 3.6E-44 T 22-04-2016 LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 PANTHER PTHR21581:SF11 38 295 3.6E-44 T 22-04-2016 LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 SUPERFAMILY SSF56601 1 296 4.23E-46 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 Gene3D G3DSA:3.40.710.10 36 296 6.6E-59 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 35 278 4.1E-46 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 4.5E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 4.5E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LMES_RS09135 03e24532022f69ebbe30e2f2658681ac 298 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 4.5E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LMES_RS03850 7220f876b3250528e65240e89667c993 318 Gene3D G3DSA:3.10.580.10 192 317 9.1E-32 T 22-04-2016 LMES_RS03850 7220f876b3250528e65240e89667c993 318 Pfam PF00571 CBS domain 205 255 9.8E-8 T 22-04-2016 IPR000644 CBS domain LMES_RS03850 7220f876b3250528e65240e89667c993 318 Pfam PF00571 CBS domain 266 318 1.4E-9 T 22-04-2016 IPR000644 CBS domain LMES_RS03850 7220f876b3250528e65240e89667c993 318 SMART SM00116 208 256 0.025 T 22-04-2016 IPR000644 CBS domain LMES_RS03850 7220f876b3250528e65240e89667c993 318 SMART SM00116 273 318 1.4 T 22-04-2016 IPR000644 CBS domain LMES_RS03850 7220f876b3250528e65240e89667c993 318 PIRSF PIRSF004692 1 318 2.9E-104 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LMES_RS03850 7220f876b3250528e65240e89667c993 318 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 42 311 1.4E-80 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LMES_RS03850 7220f876b3250528e65240e89667c993 318 Gene3D G3DSA:3.40.50.10490 8 191 2.0E-42 T 22-04-2016 LMES_RS03850 7220f876b3250528e65240e89667c993 318 SUPERFAMILY SSF53697 5 317 4.0E-55 T 22-04-2016 LMES_RS03850 7220f876b3250528e65240e89667c993 318 Pfam PF01380 SIS domain 38 172 6.2E-26 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LMES_RS03850 7220f876b3250528e65240e89667c993 318 PANTHER PTHR38418 29 316 9.4E-28 T 22-04-2016 LMES_RS07245 4ebf8ea4b01749caeadb7de2f9f85270 150 Pfam PF03780 Asp23 family, cell envelope-related function 25 128 2.7E-32 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 LMES_RS07245 4ebf8ea4b01749caeadb7de2f9f85270 150 PANTHER PTHR34297:SF1 2 150 5.9E-30 T 22-04-2016 LMES_RS07245 4ebf8ea4b01749caeadb7de2f9f85270 150 PANTHER PTHR34297 2 150 5.9E-30 T 22-04-2016 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 SUPERFAMILY SSF81606 2 240 3.4E-50 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 SMART SM00332 1 239 6.9E-16 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 Pfam PF13672 Protein phosphatase 2C 12 236 2.5E-16 T 22-04-2016 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 Gene3D G3DSA:3.60.40.10 2 240 1.7E-52 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 PANTHER PTHR13832 1 239 6.1E-39 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 SMART SM00331 7 241 2.3E-6 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LMES_RS06695 d41173780d51d55f81540527a445c5f1 244 PANTHER PTHR13832:SF278 1 239 6.1E-39 T 22-04-2016 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 SUPERFAMILY SSF52317 391 601 1.4E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 Gene3D G3DSA:3.40.50.880 391 602 5.1E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 Pfam PF08533 Beta-galactosidase C-terminal domain 625 670 2.0E-6 T 22-04-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 Gene3D G3DSA:3.20.20.80 9 383 2.3E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 PANTHER PTHR36447 3 673 3.6E-98 T 22-04-2016 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 Pfam PF02449 Beta-galactosidase 13 379 1.7E-65 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 PANTHER PTHR36447:SF1 3 673 3.6E-98 T 22-04-2016 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 Pfam PF08532 Beta-galactosidase trimerisation domain 392 601 5.3E-39 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 LMES_RS04070 6ecdf3c267981ee3663b3650d1973e40 673 SUPERFAMILY SSF51445 8 382 4.9E-68 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 176 2.1E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 PIRSF PIRSF006806 1 178 1.8E-43 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 Gene3D G3DSA:3.40.50.10420 3 175 3.9E-50 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 SUPERFAMILY SSF100950 3 176 8.51E-50 T 22-04-2016 LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 PANTHER PTHR23407:SF1 1 176 4.5E-49 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 175 4.9E-46 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LMES_RS03795 582a524e23e83e2c19cbb2a35c4732ce 178 PANTHER PTHR23407 1 176 4.5E-49 T 22-04-2016 LMES_RS07145 cd20c5faeba86496b0cff0acc200a2e5 451 PANTHER PTHR11206:SF107 3 434 3.1E-116 T 22-04-2016 LMES_RS07145 cd20c5faeba86496b0cff0acc200a2e5 451 Pfam PF01554 MatE 241 399 3.6E-18 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LMES_RS07145 cd20c5faeba86496b0cff0acc200a2e5 451 Pfam PF01554 MatE 19 178 6.3E-31 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LMES_RS07145 cd20c5faeba86496b0cff0acc200a2e5 451 PANTHER PTHR11206 3 434 3.1E-116 T 22-04-2016 LMES_RS07145 cd20c5faeba86496b0cff0acc200a2e5 451 PIRSF PIRSF006603 1 450 1.0E-87 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LMES_RS07145 cd20c5faeba86496b0cff0acc200a2e5 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 364 3.5E-62 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LMES_RS07965 019de2f7d8d9cf23f0b31e945f23db02 185 Pfam PF00583 Acetyltransferase (GNAT) family 78 155 2.2E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS07965 019de2f7d8d9cf23f0b31e945f23db02 185 PANTHER PTHR23091:SF1 1 174 8.5E-31 T 22-04-2016 LMES_RS07965 019de2f7d8d9cf23f0b31e945f23db02 185 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 40 174 1.1E-31 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 LMES_RS07965 019de2f7d8d9cf23f0b31e945f23db02 185 SUPERFAMILY SSF55729 30 177 2.06E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07965 019de2f7d8d9cf23f0b31e945f23db02 185 Gene3D G3DSA:3.40.630.30 31 180 3.1E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07965 019de2f7d8d9cf23f0b31e945f23db02 185 PANTHER PTHR23091 1 174 8.5E-31 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Pfam PF03793 PASTA domain 395 457 1.9E-12 T 22-04-2016 IPR005543 PASTA domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Pfam PF03793 PASTA domain 467 526 7.3E-10 T 22-04-2016 IPR005543 PASTA domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Pfam PF03793 PASTA domain 531 593 1.0E-5 T 22-04-2016 IPR005543 PASTA domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 SMART SM00740 391 458 6.5E-14 T 22-04-2016 IPR005543 PASTA domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 SMART SM00740 459 526 4.4E-10 T 22-04-2016 IPR005543 PASTA domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 SMART SM00740 527 594 1.7E-9 T 22-04-2016 IPR005543 PASTA domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 SMART SM00220 11 268 8.3E-59 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 PANTHER PTHR24362 1 304 7.3E-99 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 PANTHER PTHR24362 627 641 7.3E-99 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 PANTHER PTHR24362 401 455 7.3E-99 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Gene3D G3DSA:3.30.200.20 5 108 2.5E-23 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Pfam PF00069 Protein kinase domain 11 257 5.9E-52 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 SUPERFAMILY SSF56112 8 274 2.83E-76 T 22-04-2016 IPR011009 Protein kinase-like domain LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Gene3D G3DSA:1.10.510.10 109 272 5.5E-52 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 Gene3D G3DSA:1.10.510.10 581 637 5.5E-52 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 PANTHER PTHR24362:SF160 1 304 7.3E-99 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 PANTHER PTHR24362:SF160 627 641 7.3E-99 T 22-04-2016 LMES_RS06690 5cf394658e0f7516d55c2277363ab95a 641 PANTHER PTHR24362:SF160 401 455 7.3E-99 T 22-04-2016 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 SUPERFAMILY SSF64153 4 204 3.66E-51 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 Gene3D G3DSA:3.40.50.10260 1 204 4.8E-56 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 205 25.282 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 5 204 5.7E-42 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 PANTHER PTHR12592:SF0 3 216 4.5E-43 T 22-04-2016 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 PANTHER PTHR12592 3 216 4.5E-43 T 22-04-2016 LMES_RS08770 5eebb2df79f29582fc9ef1701936723b 221 Pfam PF03853 YjeF-related protein N-terminus 26 184 1.4E-37 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 LMES_RS01880 91d30098a4778c198df65d4ab720df31 214 Pfam PF00571 CBS domain 9 61 0.0023 T 22-04-2016 IPR000644 CBS domain LMES_RS01880 91d30098a4778c198df65d4ab720df31 214 Gene3D G3DSA:3.10.580.10 5 129 5.5E-16 T 22-04-2016 LMES_RS01880 91d30098a4778c198df65d4ab720df31 214 PIRSF PIRSF035040 1 212 7.3E-69 T 22-04-2016 IPR017036 Uncharacterised conserved protein UCP035040, CBS-type LMES_RS01880 91d30098a4778c198df65d4ab720df31 214 Gene3D G3DSA:3.30.70.260 138 209 6.5E-4 T 22-04-2016 LMES_RS01880 91d30098a4778c198df65d4ab720df31 214 SUPERFAMILY SSF54631 5 127 3.54E-16 T 22-04-2016 LMES_RS09110 1a399a039a0863644f9ad8b581eb584d 156 Gene3D G3DSA:1.10.10.10 2 133 1.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09110 1a399a039a0863644f9ad8b581eb584d 156 Pfam PF01047 MarR family 31 88 1.0E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS09110 1a399a039a0863644f9ad8b581eb584d 156 SUPERFAMILY SSF46785 7 133 4.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09110 1a399a039a0863644f9ad8b581eb584d 156 SMART SM00347 24 126 6.7E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS09110 1a399a039a0863644f9ad8b581eb584d 156 PANTHER PTHR33164:SF4 9 149 1.3E-16 T 22-04-2016 LMES_RS09110 1a399a039a0863644f9ad8b581eb584d 156 PANTHER PTHR33164 9 149 1.3E-16 T 22-04-2016 LMES_RS06805 c381fecd4546f2beb0049fe0c7b7e72d 162 PANTHER PTHR23091 11 162 1.8E-13 T 22-04-2016 LMES_RS06805 c381fecd4546f2beb0049fe0c7b7e72d 162 Pfam PF00583 Acetyltransferase (GNAT) family 81 136 3.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS06805 c381fecd4546f2beb0049fe0c7b7e72d 162 SUPERFAMILY SSF55729 13 159 3.19E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS06805 c381fecd4546f2beb0049fe0c7b7e72d 162 Gene3D G3DSA:3.40.630.30 10 151 1.3E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 PANTHER PTHR30175:SF1 1 562 1.9E-230 T 22-04-2016 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 PANTHER PTHR30175 1 562 1.9E-230 T 22-04-2016 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 529 541 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 SUPERFAMILY SSF51261 463 597 4.71E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.0E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 467 587 1.2E-43 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 Gene3D G3DSA:2.70.70.10 460 603 1.1E-56 T 22-04-2016 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 Pfam PF02378 Phosphotransferase system, EIIC 111 389 3.3E-31 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 467 590 5.1E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 SUPERFAMILY SSF55604 6 81 1.22E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 Gene3D G3DSA:3.30.1360.60 1 81 5.0E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS04315 9f9aac32e2079210179c2ef9855185c3 612 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 5 609 5.4E-226 T 22-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 SUPERFAMILY SSF74731 1 116 4.58E-47 T 22-04-2016 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 19 71 1.0E-14 T 22-04-2016 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 ProSitePatterns PS00937 Ribosomal protein L20 signature. 53 69 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 PANTHER PTHR10986 1 120 2.0E-59 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 Gene3D G3DSA:1.10.1900.20 54 116 3.0E-30 T 22-04-2016 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 PRINTS PR00062 Ribosomal protein L20 signature 41 70 2.5E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 PRINTS PR00062 Ribosomal protein L20 signature 74 100 2.5E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 PRINTS PR00062 Ribosomal protein L20 signature 11 40 2.5E-38 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 PANTHER PTHR10986:SF12 1 120 2.0E-59 T 22-04-2016 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 1 114 28.396 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 4.5E-46 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS06335 a402688565288ad7ce70622316aa60c3 139 Pfam PF00453 Ribosomal protein L20 2 108 2.3E-45 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 PANTHER PTHR21499 1 368 7.0E-124 T 22-04-2016 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 Gene3D G3DSA:3.30.360.10 148 298 1.8E-52 T 22-04-2016 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 182 204 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 PIRSF PIRSF000098 1 424 2.3E-147 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 Gene3D G3DSA:3.30.70.260 347 409 9.8E-4 T 22-04-2016 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 Pfam PF00742 Homoserine dehydrogenase 136 313 2.4E-60 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 SUPERFAMILY SSF55347 136 301 2.94E-49 T 22-04-2016 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 SUPERFAMILY SSF55021 347 413 6.7E-9 T 22-04-2016 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 PANTHER PTHR21499:SF2 1 368 7.0E-124 T 22-04-2016 LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 SUPERFAMILY SSF51735 3 157 1.23E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 Gene3D G3DSA:3.40.50.720 2 147 1.4E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03780 3575d0b976d8641061674b6b950d087c 425 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 128 2.3E-18 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 LMES_RS08625 5d015b9b08436469d5757db28454dd5f 123 SUPERFAMILY SSF55021 1 51 1.33E-6 T 22-04-2016 LMES_RS08625 5d015b9b08436469d5757db28454dd5f 123 Gene3D G3DSA:3.30.2130.10 1 117 4.8E-21 T 22-04-2016 LMES_RS08625 5d015b9b08436469d5757db28454dd5f 123 PANTHER PTHR31131 33 123 7.1E-16 T 22-04-2016 LMES_RS08625 5d015b9b08436469d5757db28454dd5f 123 Pfam PF13840 ACT domain 54 114 1.2E-20 T 22-04-2016 IPR027795 GATS-like ACT domain LMES_RS08625 5d015b9b08436469d5757db28454dd5f 123 SUPERFAMILY SSF55021 56 117 4.34E-18 T 22-04-2016 LMES_RS02920 6d278163fa952d4b90c11c4cbd58d594 237 Gene3D G3DSA:3.30.1380.20 7 120 1.7E-12 T 22-04-2016 LMES_RS02920 6d278163fa952d4b90c11c4cbd58d594 237 SUPERFAMILY SSF111126 6 124 1.1E-20 T 22-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain LMES_RS02920 6d278163fa952d4b90c11c4cbd58d594 237 Pfam PF10702 Protein of unknown function (DUF2507) 19 139 8.5E-42 T 22-04-2016 IPR019642 Protein of unknown function DUF2507 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 Gene3D G3DSA:3.40.50.300 4 264 1.9E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 SUPERFAMILY SSF52540 42 269 1.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 Pfam PF00571 CBS domain 340 388 0.0011 T 22-04-2016 IPR000644 CBS domain LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 Pfam PF00005 ABC transporter 45 191 1.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 SMART SM00382 52 241 1.1E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 PANTHER PTHR24220 40 270 3.0E-150 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 PANTHER PTHR24220 323 373 3.0E-150 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 PANTHER PTHR24220 5 15 3.0E-150 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 Gene3D G3DSA:3.10.580.10 272 389 2.1E-14 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 35 390 2.3E-140 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 PANTHER PTHR24220:SF374 40 270 3.0E-150 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 PANTHER PTHR24220:SF374 323 373 3.0E-150 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 PANTHER PTHR24220:SF374 5 15 3.0E-150 T 22-04-2016 LMES_RS01680 01d1136e427753d9df7b34d555e37268 397 SUPERFAMILY SSF54631 273 389 9.22E-15 T 22-04-2016 LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 PANTHER PTHR10363 1 445 5.1E-201 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 63 74 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 PANTHER PTHR10363:SF4 1 445 5.1E-201 T 22-04-2016 LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 Pfam PF03051 Peptidase C1-like family 4 442 2.7E-186 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 362 372 - T 22-04-2016 IPR025660 Cysteine peptidase, histidine active site LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 PIRSF PIRSF005700 1 445 1.8E-170 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 Gene3D G3DSA:3.90.70.10 51 445 8.6E-165 T 22-04-2016 LMES_RS07880 84877e7b81fe4cced8d73bd236ee2e91 445 SUPERFAMILY SSF54001 18 445 1.19E-127 T 22-04-2016 LMES_RS08640 ff76b274283939306e06e7fff1751298 315 Pfam PF01381 Helix-turn-helix 8 60 1.5E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08640 ff76b274283939306e06e7fff1751298 315 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 136 294 6.3E-11 T 22-04-2016 IPR010057 Transcription activator MutR, C-terminal LMES_RS08640 ff76b274283939306e06e7fff1751298 315 SMART SM00530 6 60 4.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08640 ff76b274283939306e06e7fff1751298 315 SUPERFAMILY SSF47413 1 62 2.9E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08640 ff76b274283939306e06e7fff1751298 315 PANTHER PTHR37038 1 305 1.2E-15 T 22-04-2016 LMES_RS08640 ff76b274283939306e06e7fff1751298 315 Gene3D G3DSA:1.10.260.40 2 62 9.9E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS09095 57da795a66d02c931282582653e43ee8 396 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 334 1.8E-72 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LMES_RS09095 57da795a66d02c931282582653e43ee8 396 PANTHER PTHR22893 9 331 3.0E-95 T 22-04-2016 LMES_RS09095 57da795a66d02c931282582653e43ee8 396 PANTHER PTHR22893:SF48 9 331 3.0E-95 T 22-04-2016 LMES_RS09095 57da795a66d02c931282582653e43ee8 396 Gene3D G3DSA:3.20.20.70 2 346 1.0E-98 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS09095 57da795a66d02c931282582653e43ee8 396 SUPERFAMILY SSF51395 7 340 2.37E-90 T 22-04-2016 LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 PIRSF PIRSF004776 4 380 2.1E-101 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 SUPERFAMILY SSF52374 17 174 5.9E-16 T 22-04-2016 LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 Pfam PF13521 AAA domain 183 340 3.0E-21 T 22-04-2016 LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 PANTHER PTHR37512 14 337 3.7E-32 T 22-04-2016 LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 SUPERFAMILY SSF52540 177 324 3.81E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 Gene3D G3DSA:3.40.50.300 182 366 8.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 Gene3D G3DSA:3.40.50.620 17 180 6.4E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS06720 e5b3fd30186e0b343235fdc87a2f1377 380 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 17 351 2.6E-105 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 LMES_RS08090 001c33b4d9965b32748ee10f23b74a1a 375 Gene3D G3DSA:3.20.20.210 10 372 3.8E-110 T 22-04-2016 LMES_RS08090 001c33b4d9965b32748ee10f23b74a1a 375 PANTHER PTHR30519 11 372 3.3E-118 T 22-04-2016 LMES_RS08090 001c33b4d9965b32748ee10f23b74a1a 375 PANTHER PTHR30519:SF3 11 372 3.3E-118 T 22-04-2016 LMES_RS08090 001c33b4d9965b32748ee10f23b74a1a 375 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 16 348 1.6E-16 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08090 001c33b4d9965b32748ee10f23b74a1a 375 SUPERFAMILY SSF51726 14 372 1.57E-77 T 22-04-2016 LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.8E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 255 1.5E-56 T 22-04-2016 LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PANTHER PTHR24322 8 138 2.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PANTHER PTHR24322 154 190 2.0E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 SUPERFAMILY SSF51735 3 256 8.05E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 Gene3D G3DSA:3.40.50.720 1 255 5.2E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 TIGRFAM TIGR02415 23BDH: acetoin reductases 4 257 2.3E-101 T 22-04-2016 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 9.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00535 fde5934cdf1383898ffaf219742885ea 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 9.0E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00870 95f8cecab5f9d14df8500fbcc1207da2 397 Gene3D G3DSA:1.20.1250.20 198 392 2.1E-17 T 22-04-2016 LMES_RS00870 95f8cecab5f9d14df8500fbcc1207da2 397 PANTHER PTHR23523 4 397 1.6E-114 T 22-04-2016 LMES_RS00870 95f8cecab5f9d14df8500fbcc1207da2 397 PANTHER PTHR23523:SF2 4 397 1.6E-114 T 22-04-2016 LMES_RS00870 95f8cecab5f9d14df8500fbcc1207da2 397 Pfam PF07690 Major Facilitator Superfamily 17 326 8.8E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS00870 95f8cecab5f9d14df8500fbcc1207da2 397 Gene3D G3DSA:1.20.1250.20 11 180 8.5E-17 T 22-04-2016 LMES_RS00870 95f8cecab5f9d14df8500fbcc1207da2 397 SUPERFAMILY SSF103473 10 389 1.31E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 PANTHER PTHR30146:SF31 2 321 6.6E-92 T 22-04-2016 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 Gene3D G3DSA:1.10.260.40 4 54 2.1E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 SMART SM00354 2 72 1.5E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 Gene3D G3DSA:3.40.50.2300 55 169 1.2E-39 T 22-04-2016 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.3E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 4.4E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 4.4E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 SUPERFAMILY SSF53822 60 310 6.34E-57 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 Gene3D G3DSA:3.40.50.2300 170 307 3.3E-29 T 22-04-2016 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 Pfam PF13407 Periplasmic binding protein domain 63 305 3.2E-22 T 22-04-2016 IPR025997 Periplasmic binding protein LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 SUPERFAMILY SSF47413 3 60 5.63E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02900 a32035246390434a04f6ae9b108ff2b2 326 PANTHER PTHR30146 2 321 6.6E-92 T 22-04-2016 LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 SUPERFAMILY SSF55729 9 155 3.97E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 PANTHER PTHR36174 1 338 1.3E-35 T 22-04-2016 LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 SUPERFAMILY SSF55729 170 338 1.85E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 Gene3D G3DSA:3.40.630.30 162 316 3.2E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 PANTHER PTHR36174:SF1 1 338 1.3E-35 T 22-04-2016 LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 Gene3D G3DSA:3.40.630.30 3 156 8.1E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 Pfam PF02388 FemAB family 242 337 2.3E-16 T 22-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 LMES_RS07945 cfc8bb3d183313977f2288c04ebcc13d 345 Pfam PF02388 FemAB family 13 229 1.8E-17 T 22-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 SUPERFAMILY SSF51735 1 185 1.6E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 Pfam PF00106 short chain dehydrogenase 2 90 1.3E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 Gene3D G3DSA:3.40.50.720 2 187 3.5E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00395 cff667a3bd625aae73515cd833fd4cd1 245 PANTHER PTHR24322 6 121 1.2E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04040 8475b47742e0994aee97618a973bf8ea 445 Gene3D G3DSA:3.90.1150.10 320 436 5.2E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS04040 8475b47742e0994aee97618a973bf8ea 445 Pfam PF00202 Aminotransferase class-III 31 432 1.1E-82 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS04040 8475b47742e0994aee97618a973bf8ea 445 SUPERFAMILY SSF53383 15 435 5.17E-107 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS04040 8475b47742e0994aee97618a973bf8ea 445 Gene3D G3DSA:3.40.640.10 64 319 5.8E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS04040 8475b47742e0994aee97618a973bf8ea 445 PANTHER PTHR11986:SF87 21 441 1.9E-217 T 22-04-2016 LMES_RS04040 8475b47742e0994aee97618a973bf8ea 445 PANTHER PTHR11986 21 441 1.9E-217 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 PANTHER PTHR30146 1 305 2.0E-77 T 22-04-2016 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 Gene3D G3DSA:3.40.50.2300 56 169 9.6E-28 T 22-04-2016 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 SMART SM00354 2 73 8.4E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 Pfam PF13377 Periplasmic binding protein-like domain 171 306 3.4E-23 T 22-04-2016 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 Gene3D G3DSA:1.10.260.40 3 55 1.1E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 SUPERFAMILY SSF53822 63 325 7.92E-54 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 SUPERFAMILY SSF47413 2 61 1.09E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 50 4.3E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 8.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 8.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03990 d089f1580f9d01ec7320a7a7b31926a7 326 Gene3D G3DSA:3.40.50.2300 170 325 5.9E-40 T 22-04-2016 LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 Gene3D G3DSA:3.40.50.1000 2 78 1.2E-51 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 Gene3D G3DSA:3.40.50.1000 186 272 1.2E-51 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 Gene3D G3DSA:3.30.1240.10 91 185 4.4E-8 T 22-04-2016 LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 SUPERFAMILY SSF56784 2 271 2.59E-63 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 PANTHER PTHR10000:SF8 4 273 1.2E-54 T 22-04-2016 LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 PANTHER PTHR10000 4 273 1.2E-54 T 22-04-2016 LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 267 3.5E-60 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 267 1.9E-55 T 22-04-2016 IPR000150 Cof protein GO:0016787 LMES_RS09040 cd98b9828b26fd17521b3fdee38fa17d 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 240 1.5E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS00225 ad38ea41e151bd1c00639156dd0fd42b 297 PANTHER PTHR11079:SF73 44 297 1.9E-54 T 22-04-2016 LMES_RS00225 ad38ea41e151bd1c00639156dd0fd42b 297 PANTHER PTHR11079 44 297 1.9E-54 T 22-04-2016 LMES_RS00225 ad38ea41e151bd1c00639156dd0fd42b 297 Pfam PF00849 RNA pseudouridylate synthase 93 245 1.6E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS00225 ad38ea41e151bd1c00639156dd0fd42b 297 SUPERFAMILY SSF55120 82 295 1.92E-60 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS00225 ad38ea41e151bd1c00639156dd0fd42b 297 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 298 31.776 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 Pfam PF00589 Phage integrase family 113 283 8.7E-48 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 PANTHER PTHR30349:SF38 11 300 2.0E-123 T 22-04-2016 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 SUPERFAMILY SSF56349 7 289 7.36E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 88 5.7E-19 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 Gene3D G3DSA:1.10.150.130 7 99 7.8E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 PANTHER PTHR30349 11 300 2.0E-123 T 22-04-2016 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 Gene3D G3DSA:1.10.443.10 113 291 2.2E-54 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS05170 33c75d759303d86d88bab4a028d17a29 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 9 300 4.2E-104 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 SUPERFAMILY SSF53383 47 391 2.39E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 Gene3D G3DSA:3.40.640.10 9 255 1.9E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 Gene3D G3DSA:3.90.1150.10 256 392 1.2E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 PANTHER PTHR11808:SF49 1 394 8.1E-162 T 22-04-2016 LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 PANTHER PTHR11808 1 394 8.1E-162 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 PIRSF PIRSF001434 1 393 9.2E-128 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS05460 b92a451820ef460a7cb89632cf3397e7 398 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 389 3.8E-118 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS09300 8d60a1f23fc30c13278e4f0309ad064b 393 PANTHER PTHR30572 1 393 1.1E-57 T 22-04-2016 LMES_RS09300 8d60a1f23fc30c13278e4f0309ad064b 393 Pfam PF12704 MacB-like periplasmic core domain 21 235 1.3E-21 T 22-04-2016 IPR025857 MacB-like periplasmic core domain LMES_RS09300 8d60a1f23fc30c13278e4f0309ad064b 393 Pfam PF02687 FtsX-like permease family 276 387 2.7E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 Gene3D G3DSA:3.40.50.1370 140 283 3.8E-43 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 Gene3D G3DSA:3.40.50.1370 1 139 3.0E-40 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00101 Aspartate carbamoyltransferase signature 210 219 1.4E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00101 Aspartate carbamoyltransferase signature 128 145 1.4E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00101 Aspartate carbamoyltransferase signature 32 54 1.4E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00101 Aspartate carbamoyltransferase signature 277 291 1.4E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00101 Aspartate carbamoyltransferase signature 70 79 1.4E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00101 Aspartate carbamoyltransferase signature 253 258 1.4E-29 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 141 1.7E-30 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 42 49 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 249 258 5.9E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 42 61 5.9E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 261 284 5.9E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 5.9E-20 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 SUPERFAMILY SSF53671 1 296 1.41E-81 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PANTHER PTHR11405:SF16 1 295 2.7E-105 T 22-04-2016 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 PANTHER PTHR11405 1 295 2.7E-105 T 22-04-2016 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 297 34.564 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 148 294 2.0E-22 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LMES_RS05330 6dfbee18f7bb72fd95df9fb27d04ebc0 297 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 3 296 9.5E-83 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS03980 42407f538b31833a5c40153f5f409c00 392 Gene3D G3DSA:1.20.1250.20 9 187 7.4E-23 T 22-04-2016 LMES_RS03980 42407f538b31833a5c40153f5f409c00 392 Gene3D G3DSA:1.20.1250.20 202 388 6.2E-13 T 22-04-2016 LMES_RS03980 42407f538b31833a5c40153f5f409c00 392 PANTHER PTHR23501 10 338 2.0E-21 T 22-04-2016 LMES_RS03980 42407f538b31833a5c40153f5f409c00 392 Pfam PF07690 Major Facilitator Superfamily 16 198 3.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS03980 42407f538b31833a5c40153f5f409c00 392 SUPERFAMILY SSF103473 5 387 6.02E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS02125 6b1813d0ede5362969b3149cb463945f 122 SUPERFAMILY SSF46785 14 107 3.04E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02125 6b1813d0ede5362969b3149cb463945f 122 PANTHER PTHR33204:SF13 1 112 5.3E-30 T 22-04-2016 LMES_RS02125 6b1813d0ede5362969b3149cb463945f 122 Pfam PF01638 HxlR-like helix-turn-helix 22 109 9.0E-23 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type LMES_RS02125 6b1813d0ede5362969b3149cb463945f 122 PANTHER PTHR33204 1 112 5.3E-30 T 22-04-2016 LMES_RS02125 6b1813d0ede5362969b3149cb463945f 122 Gene3D G3DSA:1.10.10.10 6 107 7.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00090 e41cbe624e9d8ad37df06a298304a769 394 Gene3D G3DSA:3.90.1150.10 260 389 2.8E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS00090 e41cbe624e9d8ad37df06a298304a769 394 PANTHER PTHR11751 15 389 1.5E-191 T 22-04-2016 LMES_RS00090 e41cbe624e9d8ad37df06a298304a769 394 SUPERFAMILY SSF53383 6 389 7.07E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS00090 e41cbe624e9d8ad37df06a298304a769 394 Pfam PF00155 Aminotransferase class I and II 32 386 1.4E-62 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS00090 e41cbe624e9d8ad37df06a298304a769 394 Gene3D G3DSA:3.40.640.10 46 259 4.2E-58 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS00090 e41cbe624e9d8ad37df06a298304a769 394 PANTHER PTHR11751:SF391 15 389 1.5E-191 T 22-04-2016 LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 SUPERFAMILY SSF52283 11 116 4.25E-12 T 22-04-2016 LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 Gene3D G3DSA:3.40.50.720 110 274 1.2E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 PANTHER PTHR10996:SF168 61 311 7.1E-45 T 22-04-2016 LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 PANTHER PTHR10996 61 311 7.1E-45 T 22-04-2016 LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 SUPERFAMILY SSF51735 96 274 9.47E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 272 1.5E-34 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 129 3.5E-8 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS05730 3ff96cd19a52d6aecde21bf0f35bcfef 314 Gene3D G3DSA:3.40.50.720 10 109 1.4E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PRINTS PR00148 Enolase signature 37 51 5.0E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PRINTS PR00148 Enolase signature 162 175 5.0E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PRINTS PR00148 Enolase signature 367 384 5.0E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PRINTS PR00148 Enolase signature 108 124 5.0E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PRINTS PR00148 Enolase signature 315 326 5.0E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PRINTS PR00148 Enolase signature 338 352 5.0E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 427 1.3E-125 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 SUPERFAMILY SSF54826 3 138 3.03E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 SUPERFAMILY SSF51604 139 430 8.06E-126 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 ProSitePatterns PS00164 Enolase signature. 338 351 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PANTHER PTHR11902 1 439 2.0E-252 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 SMART SM01193 4 135 3.5E-92 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 Gene3D G3DSA:3.30.390.10 4 127 3.3E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 4.8E-205 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 Hamap MF_00318 Enolase [eno]. 2 415 44.626 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 Pfam PF03952 Enolase, N-terminal domain 4 135 2.6E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 SMART SM01192 140 429 4.7E-206 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 PIRSF PIRSF001400 1 429 2.2E-187 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LMES_RS01110 814b5cbe71ee000330edb1a3aa7b2d89 441 Gene3D G3DSA:3.20.20.120 129 428 1.0E-130 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LMES_RS00300 02c740e20c390e8057590e7669a47d5f 168 Pfam PF01161 Phosphatidylethanolamine-binding protein 16 160 6.7E-26 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LMES_RS00300 02c740e20c390e8057590e7669a47d5f 168 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 22 161 1.8E-31 T 22-04-2016 IPR005247 YbhB/YbcL LMES_RS00300 02c740e20c390e8057590e7669a47d5f 168 SUPERFAMILY SSF49777 3 162 3.01E-31 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LMES_RS00300 02c740e20c390e8057590e7669a47d5f 168 Gene3D G3DSA:3.90.280.10 8 162 2.1E-42 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein LMES_RS00300 02c740e20c390e8057590e7669a47d5f 168 PANTHER PTHR30289 9 162 9.8E-23 T 22-04-2016 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 Gene3D G3DSA:3.40.50.140 4 168 2.6E-26 T 22-04-2016 IPR006171 Toprim domain LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 406 422 3.1E-6 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 506 520 3.1E-6 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 325 334 3.1E-6 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 115 128 3.1E-6 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 Gene3D G3DSA:1.10.290.10 309 418 1.1E-13 T 22-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PANTHER PTHR11390 93 513 3.9E-13 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PANTHER PTHR11390 1 76 3.9E-13 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 Pfam PF01131 DNA topoisomerase 169 581 1.5E-72 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 SMART SM00437 283 537 3.1E-8 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 SUPERFAMILY SSF56712 269 588 3.4E-84 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LMES_RS01990 a003be6248361d0cf0b396d704194166 696 SUPERFAMILY SSF56712 1 242 3.4E-84 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LMES_RS01990 a003be6248361d0cf0b396d704194166 696 SMART SM00493 3 141 4.1E-11 T 22-04-2016 IPR006171 Toprim domain LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PANTHER PTHR11390:SF21 93 513 3.9E-13 T 22-04-2016 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 PANTHER PTHR11390:SF21 1 76 3.9E-13 T 22-04-2016 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 Pfam PF01751 Toprim domain 5 137 3.8E-13 T 22-04-2016 IPR006171 Toprim domain LMES_RS01990 a003be6248361d0cf0b396d704194166 696 Gene3D G3DSA:1.10.460.10 476 587 1.0E-10 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LMES_RS01990 a003be6248361d0cf0b396d704194166 696 Gene3D G3DSA:1.10.460.10 177 231 1.0E-10 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 340 38.112 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 Gene3D G3DSA:3.30.360.10 159 314 7.3E-59 T 22-04-2016 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 111 5.4E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 SUPERFAMILY SSF55347 150 314 1.96E-51 T 22-04-2016 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 SUPERFAMILY SSF51735 6 176 1.65E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 317 8.0E-24 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 SMART SM00859 7 145 1.5E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 PANTHER PTHR32338:SF8 1 346 8.9E-134 T 22-04-2016 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 PANTHER PTHR32338 1 346 8.9E-134 T 22-04-2016 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 343 7.4E-120 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00295 9a59dd27f566529dc6bdaee4b04baac6 346 Gene3D G3DSA:3.40.50.720 5 158 5.2E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01910 178c56b7771182ddfe3ebf5271d0178d 179 Pfam PF00156 Phosphoribosyl transferase domain 8 159 1.1E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS01910 178c56b7771182ddfe3ebf5271d0178d 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 1.6E-57 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 LMES_RS01910 178c56b7771182ddfe3ebf5271d0178d 179 SUPERFAMILY SSF53271 3 177 2.36E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS01910 178c56b7771182ddfe3ebf5271d0178d 179 PANTHER PTHR22573 3 179 2.9E-68 T 22-04-2016 LMES_RS01910 178c56b7771182ddfe3ebf5271d0178d 179 Gene3D G3DSA:3.40.50.2020 2 178 5.2E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS01910 178c56b7771182ddfe3ebf5271d0178d 179 PANTHER PTHR22573:SF56 3 179 2.9E-68 T 22-04-2016 LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 PANTHER PTHR19211 1 529 2.8E-285 T 22-04-2016 LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 SUPERFAMILY SSF52540 295 516 2.8E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 SUPERFAMILY SSF52540 125 248 1.75E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 SUPERFAMILY SSF52540 2 92 1.75E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 Pfam PF00005 ABC transporter 335 469 1.7E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 Pfam PF00005 ABC transporter 18 184 1.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 Pfam PF12848 ABC transporter 224 308 1.0E-19 T 22-04-2016 IPR032781 ABC-transporter extension domain LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 SMART SM00382 344 514 0.0023 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 SMART SM00382 26 229 6.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 Gene3D G3DSA:3.40.50.300 317 533 2.5E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 Gene3D G3DSA:3.40.50.300 2 271 1.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05205 73955a8f849183b5bc30bd73b5697343 540 PANTHER PTHR19211:SF38 1 529 2.8E-285 T 22-04-2016 LMES_RS05060 87e43f2335caf8394a8d505069780d99 258 Gene3D G3DSA:3.20.20.70 7 237 4.9E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05060 87e43f2335caf8394a8d505069780d99 258 Pfam PF05690 Thiazole biosynthesis protein ThiG 10 249 2.6E-99 T 22-04-2016 LMES_RS05060 87e43f2335caf8394a8d505069780d99 258 PANTHER PTHR34266 2 256 8.1E-128 T 22-04-2016 LMES_RS05060 87e43f2335caf8394a8d505069780d99 258 SUPERFAMILY SSF110399 6 236 3.14E-74 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 LMES_RS05060 87e43f2335caf8394a8d505069780d99 258 Hamap MF_00443 Thiazole synthase [thiG]. 7 256 38.706 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 LMES_RS05980 6caef0f8004b1ef07b2d01bfc3c23b25 175 Gene3D G3DSA:3.40.50.2020 4 169 4.5E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS05980 6caef0f8004b1ef07b2d01bfc3c23b25 175 Pfam PF00156 Phosphoribosyl transferase domain 4 149 2.2E-23 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS05980 6caef0f8004b1ef07b2d01bfc3c23b25 175 SUPERFAMILY SSF53271 4 169 9.05E-37 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS05980 6caef0f8004b1ef07b2d01bfc3c23b25 175 PANTHER PTHR11608 1 173 3.2E-80 T 22-04-2016 LMES_RS05980 6caef0f8004b1ef07b2d01bfc3c23b25 175 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 175 35.104 T 22-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 SUPERFAMILY SSF53254 1 228 1.04E-69 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 236 2.0E-99 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 PANTHER PTHR11931 1 231 3.1E-132 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 235 42.548 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 129 1.7E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 137 225 2.3E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 Gene3D G3DSA:3.40.50.1240 1 232 2.2E-92 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS08435 a58a6d90ae2c97b184fd0f0176eae056 237 SMART SM00855 3 196 1.5E-26 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS06380 3849397d823cf058ea323182d43abd89 189 SUPERFAMILY SSF52833 7 189 8.29E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06380 3849397d823cf058ea323182d43abd89 189 PIRSF PIRSF000239 1 189 4.9E-59 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LMES_RS06380 3849397d823cf058ea323182d43abd89 189 Gene3D G3DSA:3.40.30.10 7 185 4.3E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06380 3849397d823cf058ea323182d43abd89 189 Pfam PF00578 AhpC/TSA family 8 134 1.0E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LMES_RS06380 3849397d823cf058ea323182d43abd89 189 PANTHER PTHR10681 6 189 3.0E-77 T 22-04-2016 LMES_RS06380 3849397d823cf058ea323182d43abd89 189 PANTHER PTHR10681:SF121 6 189 3.0E-77 T 22-04-2016 LMES_RS06380 3849397d823cf058ea323182d43abd89 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 183 7.5E-9 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LMES_RS06380 3849397d823cf058ea323182d43abd89 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 4 189 1.4E-83 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LMES_RS03075 c6c343b835e7c57871aef0d8ed19a34d 325 PANTHER PTHR33545:SF5 1 293 1.0E-82 T 22-04-2016 LMES_RS03075 c6c343b835e7c57871aef0d8ed19a34d 325 PIRSF PIRSF006483 1 289 1.1E-79 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS03075 c6c343b835e7c57871aef0d8ed19a34d 325 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 220 5.3E-54 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS03075 c6c343b835e7c57871aef0d8ed19a34d 325 PANTHER PTHR33545 1 293 1.0E-82 T 22-04-2016 LMES_RS03075 c6c343b835e7c57871aef0d8ed19a34d 325 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 1.0E-16 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 LMES_RS09015 985371082ee6f303db7783fdc15c209d 101 SUPERFAMILY SSF52794 1 90 9.68E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS09015 985371082ee6f303db7783fdc15c209d 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 86 3.1E-13 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS09015 985371082ee6f303db7783fdc15c209d 101 Gene3D G3DSA:3.40.50.270 2 92 4.5E-12 T 22-04-2016 LMES_RS02885 2dbc24a8ee1d167e56fea3402f4469f3 127 Gene3D G3DSA:3.10.180.10 10 124 5.2E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LMES_RS02885 2dbc24a8ee1d167e56fea3402f4469f3 127 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 97 1.7E-6 T 22-04-2016 LMES_RS02885 2dbc24a8ee1d167e56fea3402f4469f3 127 SUPERFAMILY SSF54593 9 125 4.13E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LMES_RS05260 9e0964a6414b135028d59dc64b0db1b4 181 TIGRFAM TIGR00496 frr: ribosome recycling factor 9 181 1.0E-66 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LMES_RS05260 9e0964a6414b135028d59dc64b0db1b4 181 PANTHER PTHR20982 1 181 6.3E-74 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LMES_RS05260 9e0964a6414b135028d59dc64b0db1b4 181 Pfam PF01765 Ribosome recycling factor 19 179 2.4E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain LMES_RS05260 9e0964a6414b135028d59dc64b0db1b4 181 Hamap MF_00040 Ribosome-recycling factor [frr]. 2 181 26.206 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LMES_RS05260 9e0964a6414b135028d59dc64b0db1b4 181 Gene3D G3DSA:1.10.132.20 65 181 6.6E-40 T 22-04-2016 IPR023584 Ribosome recycling factor domain LMES_RS05260 9e0964a6414b135028d59dc64b0db1b4 181 SUPERFAMILY SSF55194 3 181 2.35E-68 T 22-04-2016 IPR023584 Ribosome recycling factor domain LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PANTHER PTHR10353:SF35 1 474 1.1E-179 T 22-04-2016 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 Pfam PF00232 Glycosyl hydrolase family 1 3 473 2.0E-120 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 SUPERFAMILY SSF51445 4 474 8.04E-134 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 Gene3D G3DSA:3.20.20.80 1 473 3.7E-120 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PANTHER PTHR10353 1 474 1.1E-179 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 2.3E-18 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 2.3E-18 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 2.3E-18 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 2.3E-18 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS04550 849e141784eef30c6d71c81e946da1a8 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 2.3E-18 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LMES_RS03150 8101ff412971bf31eccd8eb2edaac1f9 342 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 341 1.4E-113 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LMES_RS03150 8101ff412971bf31eccd8eb2edaac1f9 342 PANTHER PTHR30344:SF1 3 341 2.4E-93 T 22-04-2016 LMES_RS03150 8101ff412971bf31eccd8eb2edaac1f9 342 Gene3D G3DSA:2.130.10.10 4 341 6.9E-87 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LMES_RS03150 8101ff412971bf31eccd8eb2edaac1f9 342 PANTHER PTHR30344 3 341 2.4E-93 T 22-04-2016 LMES_RS03150 8101ff412971bf31eccd8eb2edaac1f9 342 SUPERFAMILY SSF51004 34 341 6.02E-46 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LMES_RS07760 cf1d015e54216feb7cd054af78b848e9 124 PANTHER PTHR21043 10 117 1.0E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LMES_RS07760 cf1d015e54216feb7cd054af78b848e9 124 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 12 109 2.9E-37 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LMES_RS07760 cf1d015e54216feb7cd054af78b848e9 124 Gene3D G3DSA:3.30.460.10 9 113 1.4E-37 T 22-04-2016 LMES_RS07760 cf1d015e54216feb7cd054af78b848e9 124 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 8 110 24.968 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LMES_RS07760 cf1d015e54216feb7cd054af78b848e9 124 SUPERFAMILY SSF81301 7 120 2.45E-40 T 22-04-2016 LMES_RS07760 cf1d015e54216feb7cd054af78b848e9 124 Pfam PF02410 Ribosomal silencing factor during starvation 14 109 2.0E-27 T 22-04-2016 LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 SMART SM00382 29 216 1.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 Pfam PF00005 ABC transporter 21 165 1.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 SUPERFAMILY SSF52540 4 235 2.61E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 PIRSF PIRSF039137 1 237 1.7E-104 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 PANTHER PTHR24220:SF568 6 235 2.1E-124 T 22-04-2016 LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 Gene3D G3DSA:3.40.50.300 3 233 4.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 PANTHER PTHR24220 6 235 2.1E-124 T 22-04-2016 LMES_RS02310 fe1f79c65fc5706d0aae53aa677a7843 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Pfam PF01807 CHC2 zinc finger 6 98 9.4E-32 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 SUPERFAMILY SSF57783 4 98 3.06E-31 T 22-04-2016 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 SMART SM00493 262 333 2.0E-11 T 22-04-2016 IPR006171 Toprim domain LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 3.1E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 PANTHER PTHR30313 3 615 3.3E-111 T 22-04-2016 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 PIRSF PIRSF002811 2 620 3.8E-161 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Gene3D G3DSA:3.40.1360.10 244 367 1.7E-36 T 22-04-2016 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 SMART SM00400 36 90 3.4E-20 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Pfam PF13155 Toprim-like 265 350 4.2E-17 T 22-04-2016 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 TIGRFAM TIGR01391 dnaG: DNA primase 4 420 8.7E-124 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Hamap MF_00974 DNA primase [dnaG]. 4 610 24.741 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Gene3D G3DSA:3.90.580.10 3 98 1.4E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 SUPERFAMILY SSF56731 116 426 8.89E-81 T 22-04-2016 LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Gene3D G3DSA:3.90.980.10 116 243 7.9E-35 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal LMES_RS05485 4417895e9ce9c1fec784524cf2ba2e60 620 Pfam PF10410 DnaB-helicase binding domain of primase 372 425 3.5E-4 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 LMES_RS02470 7277aae0d4accea4f333e9490f0c4adc 180 PANTHER PTHR34295 1 175 7.2E-46 T 22-04-2016 LMES_RS02470 7277aae0d4accea4f333e9490f0c4adc 180 Pfam PF02632 BioY family 29 173 1.1E-31 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 LMES_RS02470 7277aae0d4accea4f333e9490f0c4adc 180 PIRSF PIRSF016661 1 178 4.5E-36 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 LMES_RS02470 7277aae0d4accea4f333e9490f0c4adc 180 PANTHER PTHR34295:SF2 1 175 7.2E-46 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Pfam PF00679 Elongation factor G C-terminus 608 694 1.3E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Hamap MF_00054_B Elongation factor G [fusA]. 7 699 105.66 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SMART SM00889 488 606 3.6E-69 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Gene3D G3DSA:3.30.70.870 414 488 1.4E-36 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SUPERFAMILY SSF50447 273 412 2.25E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Gene3D G3DSA:3.30.70.240 606 698 4.1E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SMART SM00838 608 695 2.9E-54 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Pfam PF03764 Elongation factor G, domain IV 487 605 5.3E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SUPERFAMILY SSF54980 611 697 2.01E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PANTHER PTHR23115:SF66 311 699 0.0 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PANTHER PTHR23115:SF66 1 187 0.0 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PANTHER PTHR23115:SF66 263 291 0.0 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Gene3D G3DSA:3.30.230.10 492 605 4.9E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SUPERFAMILY SSF52540 6 289 1.88E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 699 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Pfam PF00009 Elongation factor Tu GTP binding domain 10 289 3.1E-67 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PRINTS PR00315 GTP-binding elongation factor signature 104 115 4.6E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PRINTS PR00315 GTP-binding elongation factor signature 13 26 4.6E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.6E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PRINTS PR00315 GTP-binding elongation factor signature 140 149 4.6E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PRINTS PR00315 GTP-binding elongation factor signature 88 98 4.6E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PANTHER PTHR23115 311 699 0.0 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PANTHER PTHR23115 1 187 0.0 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 PANTHER PTHR23115 263 291 0.0 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Gene3D G3DSA:3.40.50.300 7 295 2.1E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 189 1.1E-38 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SUPERFAMILY SSF54980 412 489 1.8E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Gene3D G3DSA:2.40.30.10 313 413 1.2E-35 T 22-04-2016 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 SUPERFAMILY SSF54211 487 606 1.67E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Pfam PF03144 Elongation factor Tu domain 2 332 399 1.1E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LMES_RS00865 6c1d0ce6e60ecb878b72fb70e8a76069 703 Pfam PF14492 Elongation Factor G, domain II 412 485 1.7E-33 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 Gene3D G3DSA:1.20.1250.20 275 489 1.5E-22 T 22-04-2016 LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 Pfam PF07690 Major Facilitator Superfamily 22 426 4.0E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 441 8.3E-88 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 PANTHER PTHR23501 10 492 4.1E-161 T 22-04-2016 LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 PANTHER PTHR23501:SF82 10 492 4.1E-161 T 22-04-2016 LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 Gene3D G3DSA:1.20.1250.20 16 206 5.4E-24 T 22-04-2016 LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 SUPERFAMILY SSF103473 265 437 3.92E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 SUPERFAMILY SSF103473 466 489 3.92E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08450 be8f97a5ec2227c0de4630c50894b0bc 503 SUPERFAMILY SSF103473 12 213 3.92E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 SUPERFAMILY SSF53271 96 235 2.98E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 PANTHER PTHR11776:SF9 48 263 4.3E-97 T 22-04-2016 LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 73 6.0E-24 T 22-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 Gene3D G3DSA:1.10.10.10 1 73 5.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 264 1.0E-101 T 22-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 Gene3D G3DSA:3.40.50.2020 82 253 1.7E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 SUPERFAMILY SSF46785 2 74 4.63E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 Pfam PF00156 Phosphoribosyl transferase domain 118 242 3.6E-19 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 PANTHER PTHR11776 48 263 4.3E-97 T 22-04-2016 LMES_RS07200 a2e52ae7519e8ae6ca3f40ff3b47773c 277 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 3.8E-29 T 22-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.128 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 Gene3D G3DSA:3.90.930.12 2 82 7.7E-31 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 SUPERFAMILY SSF56053 83 177 7.19E-32 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 Gene3D G3DSA:3.90.930.12 83 177 4.0E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 Pfam PF00347 Ribosomal protein L6 90 164 1.6E-16 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 Pfam PF00347 Ribosomal protein L6 12 82 3.6E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.8E-73 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 PANTHER PTHR11655:SF14 1 178 3.7E-84 T 22-04-2016 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 PANTHER PTHR11655 1 178 3.7E-84 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 8.9E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 8.9E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 8.9E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 SUPERFAMILY SSF56053 1 82 2.88E-26 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS00970 ea13dc6eed97576b12259aa4c2717bed 178 PIRSF PIRSF002162 1 177 1.7E-45 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS05775 eee611f8d5971729244d28e672497cbd 193 Gene3D G3DSA:1.10.357.10 42 134 1.2E-10 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS05775 eee611f8d5971729244d28e672497cbd 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 60 2.0E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS05775 eee611f8d5971729244d28e672497cbd 193 SUPERFAMILY SSF46689 8 71 3.69E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05775 eee611f8d5971729244d28e672497cbd 193 Gene3D G3DSA:1.10.10.60 2 41 2.9E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 PANTHER PTHR34134 1 129 2.7E-22 T 22-04-2016 LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 PIRSF PIRSF019455 1 130 2.0E-36 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 SUPERFAMILY SSF46785 5 122 4.01E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 Pfam PF03965 Penicillinase repressor 5 119 1.5E-28 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 Gene3D G3DSA:1.10.10.10 4 78 4.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 PANTHER PTHR34134:SF1 1 129 2.7E-22 T 22-04-2016 LMES_RS00240 2d6bbc4c09bc09faa79ff00b7664d0b9 141 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 5 133 3.5E-40 T 22-04-2016 IPR014071 Copper transport repressor CopY/TcrY LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 Pfam PF01168 Alanine racemase, N-terminal domain 15 231 6.9E-51 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 SUPERFAMILY SSF50621 239 372 1.57E-32 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PANTHER PTHR30511 4 373 4.3E-94 T 22-04-2016 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PANTHER PTHR30511:SF0 4 373 4.3E-94 T 22-04-2016 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 Hamap MF_01201 Alanine racemase. 7 372 25.695 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 Gene3D G3DSA:2.40.37.10 222 372 9.4E-36 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 TIGRFAM TIGR00492 alr: alanine racemase 8 372 1.5E-74 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 SUPERFAMILY SSF51419 15 247 4.09E-48 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 Gene3D G3DSA:3.20.20.10 17 221 9.6E-54 T 22-04-2016 IPR029066 PLP-binding barrel LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 262 277 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 279 294 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 129 141 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 32 48 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 164 175 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 68 86 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 300 317 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 PRINTS PR00992 Alanine racemase signature 205 232 1.6E-38 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 SMART SM01005 246 372 7.7E-40 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS02005 b157cbaa867d083e4102b0cace596338 373 Pfam PF00842 Alanine racemase, C-terminal domain 246 370 1.0E-23 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LMES_RS08480 704af3b3f304cde4e63bcf07b5030e93 206 Pfam PF13508 Acetyltransferase (GNAT) domain 122 180 2.3E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS08480 704af3b3f304cde4e63bcf07b5030e93 206 SUPERFAMILY SSF55729 1 86 1.52E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08480 704af3b3f304cde4e63bcf07b5030e93 206 SUPERFAMILY SSF55729 116 186 1.52E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08480 704af3b3f304cde4e63bcf07b5030e93 206 Gene3D G3DSA:3.40.630.30 1 186 1.5E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08480 704af3b3f304cde4e63bcf07b5030e93 206 PANTHER PTHR23091 118 184 4.4E-12 T 22-04-2016 LMES_RS08480 704af3b3f304cde4e63bcf07b5030e93 206 PANTHER PTHR23091 1 77 4.4E-12 T 22-04-2016 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 2.3E-249 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 PANTHER PTHR15184:SF8 1 466 0.0 T 22-04-2016 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 Gene3D G3DSA:2.40.10.170 1 77 1.6E-29 T 22-04-2016 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 Gene3D G3DSA:3.40.50.300 79 346 2.2E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 SMART SM00382 145 330 1.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 SUPERFAMILY SSF47917 349 465 1.28E-50 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 SUPERFAMILY SSF52540 79 351 1.52E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.5E-68 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.852 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 PANTHER PTHR15184 1 466 0.0 T 22-04-2016 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 3.9E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 SUPERFAMILY SSF50615 1 77 4.19E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS08395 9331d77b9c36ac8d21ff6ae51ec3089c 466 Gene3D G3DSA:1.10.1140.10 349 465 7.1E-51 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS00885 8dac9eb6d96697d22dc1707e393e6393 276 Gene3D G3DSA:1.10.3720.10 6 260 2.6E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00885 8dac9eb6d96697d22dc1707e393e6393 276 PANTHER PTHR30222 6 256 7.7E-70 T 22-04-2016 LMES_RS00885 8dac9eb6d96697d22dc1707e393e6393 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 259 6.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00885 8dac9eb6d96697d22dc1707e393e6393 276 SUPERFAMILY SSF161098 5 253 2.9E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00885 8dac9eb6d96697d22dc1707e393e6393 276 PANTHER PTHR30222:SF1 6 256 7.7E-70 T 22-04-2016 LMES_RS08850 04631a7fcc996638ab6d9965031f4072 81 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-6 T 22-04-2016 LMES_RS08850 04631a7fcc996638ab6d9965031f4072 81 Pfam PF01842 ACT domain 5 67 9.2E-13 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LMES_RS08850 04631a7fcc996638ab6d9965031f4072 81 SUPERFAMILY SSF55021 6 74 1.78E-10 T 22-04-2016 LMES_RS08850 04631a7fcc996638ab6d9965031f4072 81 Gene3D G3DSA:3.30.70.260 3 76 1.2E-13 T 22-04-2016 LMES_RS06605 95fce99c3137ec8675be44151dc349fd 234 PANTHER PTHR37820 3 232 1.0E-21 T 22-04-2016 LMES_RS06605 95fce99c3137ec8675be44151dc349fd 234 Hamap MF_00912 Cell division protein DivIB [divIB]. 2 234 24.173 T 22-04-2016 IPR026580 Cell division protein DivIB LMES_RS06605 95fce99c3137ec8675be44151dc349fd 234 Pfam PF03799 Cell division protein FtsQ 113 222 9.6E-5 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 Pfam PF06723 MreB/Mbl protein 8 332 5.7E-133 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 8 333 5.7E-139 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PANTHER PTHR19375 5 323 2.3E-147 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 Gene3D G3DSA:3.90.640.10 182 256 2.1E-25 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 SUPERFAMILY SSF53067 145 326 3.01E-46 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 SUPERFAMILY SSF53067 9 143 4.8E-36 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.8E-55 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 1.8E-55 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 45 63 1.8E-55 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.8E-55 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 65 88 1.8E-55 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 PANTHER PTHR19375:SF117 5 323 2.3E-147 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 Gene3D G3DSA:3.30.420.40 8 154 5.8E-40 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 Gene3D G3DSA:3.30.420.40 155 181 1.1E-31 T 22-04-2016 LMES_RS02750 cb06d7c3dbfc69d5774a0fd23a748e74 335 Gene3D G3DSA:3.30.420.40 260 314 1.1E-31 T 22-04-2016 LMES_RS08030 51c9bb4102848e68dbae381fd4e845e3 614 PANTHER PTHR11785 18 479 3.2E-170 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08030 51c9bb4102848e68dbae381fd4e845e3 614 PANTHER PTHR11785:SF125 18 479 3.2E-170 T 22-04-2016 LMES_RS08030 51c9bb4102848e68dbae381fd4e845e3 614 Pfam PF13520 Amino acid permease 40 445 1.4E-30 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS06190 ce7e5d49beffa05948ca0d042ebc792c 358 Gene3D G3DSA:2.10.270.10 257 355 1.4E-14 T 22-04-2016 LMES_RS06190 ce7e5d49beffa05948ca0d042ebc792c 358 Gene3D G3DSA:3.20.20.80 45 240 7.7E-47 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06190 ce7e5d49beffa05948ca0d042ebc792c 358 Pfam PF01183 Glycosyl hydrolases family 25 48 228 2.7E-39 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 LMES_RS06190 ce7e5d49beffa05948ca0d042ebc792c 358 SUPERFAMILY SSF69360 207 356 1.83E-16 T 22-04-2016 LMES_RS06190 ce7e5d49beffa05948ca0d042ebc792c 358 SMART SM00641 45 158 2.7E-5 T 22-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup LMES_RS06190 ce7e5d49beffa05948ca0d042ebc792c 358 SUPERFAMILY SSF51445 47 240 4.77E-41 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS08380 2a054af55dc2be0549add755d6cf18e6 414 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 337 1.2E-65 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LMES_RS08380 2a054af55dc2be0549add755d6cf18e6 414 SUPERFAMILY SSF51395 14 338 5.64E-87 T 22-04-2016 LMES_RS08380 2a054af55dc2be0549add755d6cf18e6 414 Gene3D G3DSA:3.20.20.70 13 342 1.5E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS08380 2a054af55dc2be0549add755d6cf18e6 414 PANTHER PTHR22893 8 344 9.6E-84 T 22-04-2016 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Gene3D G3DSA:1.10.3500.10 120 327 1.5E-82 T 22-04-2016 IPR023323 Tex-like domain LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Gene3D G3DSA:1.10.3500.10 455 502 1.5E-82 T 22-04-2016 IPR023323 Tex-like domain LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Pfam PF16921 Tex protein YqgF-like domain 331 455 8.5E-51 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Pfam PF12836 Helix-hairpin-helix motif 495 559 4.9E-26 T 22-04-2016 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Gene3D G3DSA:3.30.420.140 330 454 1.3E-47 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SUPERFAMILY SSF53098 327 473 7.36E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Gene3D G3DSA:1.10.150.310 503 637 4.5E-42 T 22-04-2016 IPR023097 Tex RuvX-like domain LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SUPERFAMILY SSF47781 564 639 5.56E-14 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Pfam PF09371 Tex-like protein N-terminal domain 21 200 6.5E-60 T 22-04-2016 IPR018974 Tex-like protein, N-terminal LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SMART SM00732 331 428 3.1E-35 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SUPERFAMILY SSF50249 644 727 8.21E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Pfam PF00575 S1 RNA binding domain 656 726 1.3E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 PANTHER PTHR10724 10 730 2.7E-297 T 22-04-2016 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 PANTHER PTHR10724:SF1 10 730 2.7E-297 T 22-04-2016 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Gene3D G3DSA:2.40.50.140 651 727 7.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SMART SM00316 656 727 2.7E-22 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SUPERFAMILY SSF158832 19 326 4.32E-96 T 22-04-2016 LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 Gene3D G3DSA:1.10.10.650 14 119 8.6E-38 T 22-04-2016 IPR023319 Tex-like protein, HTH domain LMES_RS05555 194260c70220c598b0ec8b532230d52b 730 SUPERFAMILY SSF47781 474 560 1.26E-24 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 PANTHER PTHR23508:SF4 1 422 1.3E-230 T 22-04-2016 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 Pfam PF00083 Sugar (and other) transporter 16 225 2.1E-26 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 PANTHER PTHR23508 1 422 1.3E-230 T 22-04-2016 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 Gene3D G3DSA:1.20.1250.20 231 419 2.4E-19 T 22-04-2016 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 Gene3D G3DSA:1.20.1250.20 15 217 5.8E-23 T 22-04-2016 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 287 304 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS05665 72c5e270dbbf5bfad681e1c69f8cc3ad 422 SUPERFAMILY SSF103473 11 413 3.01E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04255 3d57885fcb849fc82e1454d823325ab4 190 Gene3D G3DSA:1.10.357.10 9 132 2.4E-11 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS04255 3d57885fcb849fc82e1454d823325ab4 190 PANTHER PTHR30055 1 157 9.8E-16 T 22-04-2016 LMES_RS04255 3d57885fcb849fc82e1454d823325ab4 190 SUPERFAMILY SSF46689 5 67 6.98E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS04255 3d57885fcb849fc82e1454d823325ab4 190 PANTHER PTHR30055:SF55 1 157 9.8E-16 T 22-04-2016 LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 Pfam PF01966 HD domain 163 280 2.2E-8 T 22-04-2016 IPR006674 HD domain LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 SMART SM00471 156 290 0.0022 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 PANTHER PTHR37294 1 316 4.1E-98 T 22-04-2016 LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 TIGRFAM TIGR00277 HDIG: HDIG domain 159 205 1.9E-7 T 22-04-2016 IPR006675 HDIG domain LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 Gene3D G3DSA:1.10.3210.10 150 284 1.3E-6 T 22-04-2016 IPR006674 HD domain LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 PANTHER PTHR37294:SF1 1 316 4.1E-98 T 22-04-2016 LMES_RS03510 f0fa4abcfd91c3a744291dbbb23f1818 316 SUPERFAMILY SSF109604 141 280 9.42E-12 T 22-04-2016 LMES_RS08025 efd744534244c09587344aa5ca085095 243 PANTHER PTHR21343 4 226 7.3E-75 T 22-04-2016 LMES_RS08025 efd744534244c09587344aa5ca085095 243 SUPERFAMILY SSF52317 21 206 5.0E-26 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS08025 efd744534244c09587344aa5ca085095 243 PANTHER PTHR21343:SF9 4 226 7.3E-75 T 22-04-2016 LMES_RS08025 efd744534244c09587344aa5ca085095 243 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 8 210 2.6E-40 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 LMES_RS08025 efd744534244c09587344aa5ca085095 243 Gene3D G3DSA:3.40.50.880 27 223 5.0E-17 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00097 Anthranilate synthase component II signature 97 105 3.2E-30 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.2E-30 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00097 Anthranilate synthase component II signature 162 175 3.2E-30 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00097 Anthranilate synthase component II signature 45 54 3.2E-30 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00097 Anthranilate synthase component II signature 116 128 3.2E-30 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00097 Anthranilate synthase component II signature 72 83 3.2E-30 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 1.1E-52 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LMES_RS05130 d408e43247f8422faa69777545505080 190 PANTHER PTHR11922:SF7 1 186 3.9E-56 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 Pfam PF00117 Glutamine amidotransferase class-I 4 183 6.3E-45 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 42 56 4.3E-8 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 72 88 4.3E-8 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 Gene3D G3DSA:3.40.50.880 1 188 3.5E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05130 d408e43247f8422faa69777545505080 190 SUPERFAMILY SSF52317 1 187 1.1E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 2.2E-13 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 2.2E-13 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PRINTS PR00096 Glutamine amidotransferase superfamily signature 45 54 2.2E-13 T 22-04-2016 LMES_RS05130 d408e43247f8422faa69777545505080 190 PANTHER PTHR11922 1 186 3.9E-56 T 22-04-2016 LMES_RS03945 7f163fcbfa83ad06a50db7b1e40138ad 301 Gene3D G3DSA:1.20.1510.10 8 214 4.7E-10 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain LMES_RS03945 7f163fcbfa83ad06a50db7b1e40138ad 301 SUPERFAMILY SSF161111 5 219 3.4E-16 T 22-04-2016 LMES_RS03945 7f163fcbfa83ad06a50db7b1e40138ad 301 Pfam PF01545 Cation efflux family 13 218 9.8E-27 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 PIRSF PIRSF005814 1 800 4.6E-244 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 Pfam PF01713 Smr domain 725 800 4.3E-21 T 22-04-2016 IPR002625 Smr domain LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 PANTHER PTHR11361 34 602 7.0E-211 T 22-04-2016 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 SMART SM00463 722 800 3.9E-21 T 22-04-2016 IPR002625 Smr domain LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 411 427 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 800 1.3E-220 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 Pfam PF00488 MutS domain V 332 512 1.8E-33 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 SUPERFAMILY SSF160443 724 800 5.36E-9 T 22-04-2016 IPR002625 Smr domain LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 799 20.578 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 SMART SM00533 13 316 3.3E-19 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 SUPERFAMILY SSF52540 294 517 1.21E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 Gene3D G3DSA:3.40.50.300 294 516 2.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 SMART SM00534 329 514 8.6E-72 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 SUPERFAMILY SSF48334 5 290 1.44E-33 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LMES_RS07665 b557e3bb0ab9adf30d0ca7e5012a61ab 800 PANTHER PTHR11361:SF14 34 602 7.0E-211 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 Gene3D G3DSA:3.40.50.1000 2 171 6.9E-32 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 PANTHER PTHR23133 10 173 2.8E-15 T 22-04-2016 LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 PIRSF PIRSF004682 2 175 3.2E-30 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 SUPERFAMILY SSF56784 3 152 4.0E-26 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 Pfam PF13242 HAD-hyrolase-like 94 149 7.4E-12 T 22-04-2016 LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 PANTHER PTHR23133:SF3 10 173 2.8E-15 T 22-04-2016 LMES_RS04975 a24541fce302a5b66b3c5263fb4dc3fd 177 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 9 142 6.5E-22 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 PANTHER PTHR23501 8 454 2.1E-73 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 Pfam PF07690 Major Facilitator Superfamily 18 406 6.0E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 SUPERFAMILY SSF103473 6 194 1.15E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 SUPERFAMILY SSF103473 247 455 1.15E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 8.1E-14 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 8.1E-14 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 8.1E-14 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 8.1E-14 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 8.1E-14 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 Gene3D G3DSA:1.20.1250.20 25 189 3.6E-23 T 22-04-2016 LMES_RS02175 ae1aad0d2753084a02af7dafc9209aea 462 Gene3D G3DSA:1.20.1250.20 265 454 2.6E-16 T 22-04-2016 LMES_RS07550 3e69105a15226c77545f75d0ce24f5ab 504 PIRSF PIRSF006677 3 504 2.1E-125 T 22-04-2016 IPR007566 Phosphoenolpyruvate carboxylase, archaeal-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LMES_RS07550 3e69105a15226c77545f75d0ce24f5ab 504 Hamap MF_01904 Phosphoenolpyruvate carboxylase [ppcA]. 5 504 38.692 T 22-04-2016 IPR007566 Phosphoenolpyruvate carboxylase, archaeal-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LMES_RS07550 3e69105a15226c77545f75d0ce24f5ab 504 Pfam PF14010 Phosphoenolpyruvate carboxylase 6 504 1.1E-134 T 22-04-2016 IPR007566 Phosphoenolpyruvate carboxylase, archaeal-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LMES_RS07550 3e69105a15226c77545f75d0ce24f5ab 504 SUPERFAMILY SSF51621 128 429 8.0E-44 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS07550 3e69105a15226c77545f75d0ce24f5ab 504 TIGRFAM TIGR02751 PEPCase_arch: phosphoenolpyruvate carboxylase 6 504 2.4E-187 T 22-04-2016 IPR007566 Phosphoenolpyruvate carboxylase, archaeal-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 12 452 3.8E-108 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 PRINTS PR00171 Sugar transporter signature 22 32 4.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 PRINTS PR00171 Sugar transporter signature 380 392 4.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 PRINTS PR00171 Sugar transporter signature 108 127 4.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 PRINTS PR00171 Sugar transporter signature 267 277 4.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 PRINTS PR00171 Sugar transporter signature 357 378 4.9E-27 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 Gene3D G3DSA:1.20.1250.20 18 199 4.7E-31 T 22-04-2016 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 Gene3D G3DSA:1.20.1250.20 261 453 5.6E-21 T 22-04-2016 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 86 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 PANTHER PTHR23500 16 454 7.7E-158 T 22-04-2016 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 Pfam PF00083 Sugar (and other) transporter 16 454 2.3E-109 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 SUPERFAMILY SSF103473 236 453 8.24E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04125 65cc270940abcd71955ed6fa0cf6bd8e 459 SUPERFAMILY SSF103473 13 208 8.24E-77 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS02660 fae74b184e7774cfb1ee0e813f5dbe00 476 PANTHER PTHR11785 21 472 4.9E-124 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS02660 fae74b184e7774cfb1ee0e813f5dbe00 476 Pfam PF13520 Amino acid permease 31 442 3.2E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS02660 fae74b184e7774cfb1ee0e813f5dbe00 476 PANTHER PTHR11785:SF342 21 472 4.9E-124 T 22-04-2016 LMES_RS02660 fae74b184e7774cfb1ee0e813f5dbe00 476 PIRSF PIRSF006060 12 475 1.6E-82 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PANTHER PTHR11071 189 247 8.5E-71 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PANTHER PTHR11071 2 166 8.5E-71 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 91 108 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 Gene3D G3DSA:2.40.100.10 47 247 8.2E-63 T 22-04-2016 IPR029000 Cyclophilin-like domain LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PANTHER PTHR11071:SF282 189 247 8.5E-71 T 22-04-2016 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PANTHER PTHR11071:SF282 2 166 8.5E-71 T 22-04-2016 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 58 243 2.9E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 85 2.7E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 96 108 2.7E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 2.7E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LMES_RS03030 96dee8b63b0c9e88d25c84f48ca9a4cc 249 SUPERFAMILY SSF50891 57 245 5.11E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 PANTHER PTHR23406:SF3 27 325 7.5E-45 T 22-04-2016 LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 322 4.1E-115 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 322 4.3E-111 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 PANTHER PTHR23406 27 325 7.5E-45 T 22-04-2016 LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 PIRSF PIRSF000428 1 326 3.1E-104 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 Gene3D G3DSA:3.40.50.10750 137 298 2.0E-64 T 22-04-2016 LMES_RS06465 27637ac609b6b50f587c4722b5ba8bcf 326 SUPERFAMILY SSF53659 2 325 4.52E-89 T 22-04-2016 LMES_RS03700 03e8441128a8c81118ac0dd143499c85 229 SUPERFAMILY SSF53335 10 105 5.78E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03700 03e8441128a8c81118ac0dd143499c85 229 PANTHER PTHR38451 2 229 5.0E-63 T 22-04-2016 LMES_RS03700 03e8441128a8c81118ac0dd143499c85 229 PIRSF PIRSF018637 4 229 1.2E-72 T 22-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 LMES_RS03700 03e8441128a8c81118ac0dd143499c85 229 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 226 2.8E-64 T 22-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 LMES_RS03700 03e8441128a8c81118ac0dd143499c85 229 Gene3D G3DSA:3.40.50.150 17 155 1.8E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 Gene3D G3DSA:3.40.50.1370 5 144 1.2E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PANTHER PTHR11405:SF44 294 334 9.8E-169 T 22-04-2016 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PANTHER PTHR11405:SF44 1 274 9.8E-169 T 22-04-2016 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.0E-44 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 327 3.5E-53 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 SUPERFAMILY SSF53671 5 331 9.69E-98 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 Gene3D G3DSA:3.40.50.1370 145 316 1.3E-63 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PANTHER PTHR11405 294 334 9.8E-169 T 22-04-2016 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PANTHER PTHR11405 1 274 9.8E-169 T 22-04-2016 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 329 1.7E-116 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 3.4E-27 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 3.4E-27 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 3.4E-27 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 3.4E-27 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 308 319 3.4E-27 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 6.4E-22 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 6.4E-22 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 6.4E-22 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 6.4E-22 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LMES_RS06415 e750dd8ebb61ada6b98b1c35db04afb6 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 330 77.332 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LMES_RS07265 ad628dd73044104814149f5d16454b12 70 PANTHER PTHR41306 2 70 2.8E-14 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 LMES_RS07265 ad628dd73044104814149f5d16454b12 70 Hamap MF_01553 UPF0356 protein . 1 70 20.136 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 LMES_RS07265 ad628dd73044104814149f5d16454b12 70 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 2.0E-15 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 LMES_RS07265 ad628dd73044104814149f5d16454b12 70 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 2.2E-29 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 LMES_RS08040 09ae76892872ecd54b4ad592390c15bc 331 Pfam PF01594 Domain of unknown function DUF20 18 325 2.9E-38 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LMES_RS08040 09ae76892872ecd54b4ad592390c15bc 331 PANTHER PTHR21716 1 322 1.4E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LMES_RS08040 09ae76892872ecd54b4ad592390c15bc 331 PANTHER PTHR21716:SF11 1 322 1.4E-50 T 22-04-2016 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 Gene3D G3DSA:3.40.1190.20 4 251 1.9E-63 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 154 171 6.3E-23 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 81 98 6.3E-23 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 24 45 6.3E-23 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 111 125 6.3E-23 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 55 63 6.3E-23 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PANTHER PTHR20857:SF19 3 256 6.0E-43 T 22-04-2016 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PANTHER PTHR20857 3 256 6.0E-43 T 22-04-2016 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 5 248 26.253 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 Pfam PF02110 Hydroxyethylthiazole kinase family 3 242 7.8E-60 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 SUPERFAMILY SSF53613 5 248 8.57E-49 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS02315 eeaf13d3d8c20dbdb99bbcbe593cff14 259 PIRSF PIRSF000513 1 256 1.8E-72 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 SUPERFAMILY SSF53613 6 270 5.73E-61 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 5 273 21.659 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 PANTHER PTHR12592:SF0 5 268 5.0E-54 T 22-04-2016 LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 4 269 2.1E-50 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 Gene3D G3DSA:3.40.1190.20 4 271 2.4E-69 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 Pfam PF01256 Carbohydrate kinase 28 265 2.4E-54 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 PANTHER PTHR12592 5 268 5.0E-54 T 22-04-2016 LMES_RS06790 85cc328fe1e70cca54dbd6f671c1faae 273 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 209 219 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 SUPERFAMILY SSF55315 3 99 3.88E-23 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 PANTHER PTHR12029 1 254 2.2E-52 T 22-04-2016 LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 34 99 4.5E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 SUPERFAMILY SSF75217 89 254 1.44E-36 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 Gene3D G3DSA:3.40.1280.10 111 253 2.6E-41 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 SMART SM00967 31 101 6.9E-13 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 Pfam PF00588 SpoU rRNA Methylase family 113 251 4.0E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LMES_RS07720 0495ba3bb6e186e0238554c14e702812 257 Gene3D G3DSA:3.30.1330.30 3 98 4.5E-25 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS01150 d0e0e4ba247f7cb007728e85109c86bf 181 Gene3D G3DSA:3.30.160.100 3 98 2.6E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LMES_RS01150 d0e0e4ba247f7cb007728e85109c86bf 181 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 95 2.2E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LMES_RS01150 d0e0e4ba247f7cb007728e85109c86bf 181 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 123 176 1.2E-25 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal LMES_RS01150 d0e0e4ba247f7cb007728e85109c86bf 181 PANTHER PTHR33231 3 181 3.6E-51 T 22-04-2016 LMES_RS01150 d0e0e4ba247f7cb007728e85109c86bf 181 SUPERFAMILY SSF69754 4 106 3.4E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LMES_RS01150 d0e0e4ba247f7cb007728e85109c86bf 181 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 4 101 6.9E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 Gene3D G3DSA:3.40.50.300 1 239 1.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 PANTHER PTHR24220:SF327 3 242 6.1E-116 T 22-04-2016 LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 PIRSF PIRSF039085 1 244 4.9E-99 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 SUPERFAMILY SSF52540 1 238 1.91E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 SMART SM00382 26 216 6.5E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 Pfam PF00005 ABC transporter 17 168 2.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00625 ad317f7cf9550e889dea33347af97611 260 PANTHER PTHR24220 3 242 6.1E-116 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 437 5.5E-12 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PANTHER PTHR22912:SF125 3 436 4.9E-79 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 Gene3D G3DSA:3.50.50.60 5 133 3.2E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 Gene3D G3DSA:3.30.390.30 336 438 7.6E-17 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PIRSF PIRSF000350 1 438 2.1E-68 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PANTHER PTHR22912 3 436 4.9E-79 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 SUPERFAMILY SSF55424 334 442 8.42E-21 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 253 267 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 437 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 1.4E-43 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 SUPERFAMILY SSF51905 1 316 1.62E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 Gene3D G3DSA:3.50.50.60 134 321 7.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 314 1.1E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 3.1E-25 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 3.1E-25 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.1E-25 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 268 3.1E-25 T 22-04-2016 LMES_RS03880 a1e0d82e8539464591f12a0ec257af94 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 3.1E-25 T 22-04-2016 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 ProSitePatterns PS00163 Fumarate lyases signature. 314 323 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 Pfam PF10415 Fumarase C C-terminus 406 456 3.1E-15 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 PANTHER PTHR11444 1 457 7.0E-198 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 Gene3D G3DSA:1.10.40.30 406 455 9.4E-16 T 22-04-2016 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 PANTHER PTHR11444:SF25 1 457 7.0E-198 T 22-04-2016 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 Gene3D G3DSA:1.20.200.10 137 400 1.2E-80 T 22-04-2016 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 SUPERFAMILY SSF48557 1 451 3.93E-130 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 Pfam PF00206 Lyase 9 339 4.0E-89 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 PRINTS PR00149 Fumarate lyase superfamily signature 268 295 5.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 PRINTS PR00149 Fumarate lyase superfamily signature 177 195 5.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 PRINTS PR00149 Fumarate lyase superfamily signature 314 330 5.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 5.4E-29 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS00695 d1bf1418b79912bdeb3298df08eb77c4 476 Gene3D G3DSA:1.10.275.10 1 136 1.5E-50 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LMES_RS02160 0da7dc8618518e642d6cddedabbfaa16 380 PANTHER PTHR22935:SF1 37 374 1.4E-27 T 22-04-2016 LMES_RS02160 0da7dc8618518e642d6cddedabbfaa16 380 Pfam PF00144 Beta-lactamase 75 365 4.7E-30 T 22-04-2016 IPR001466 Beta-lactamase-related LMES_RS02160 0da7dc8618518e642d6cddedabbfaa16 380 SUPERFAMILY SSF56601 64 371 2.82E-52 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS02160 0da7dc8618518e642d6cddedabbfaa16 380 Gene3D G3DSA:3.40.710.10 63 373 1.3E-43 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS02160 0da7dc8618518e642d6cddedabbfaa16 380 PANTHER PTHR22935 37 374 1.4E-27 T 22-04-2016 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 Pfam PF00762 Ferrochelatase 3 311 4.5E-96 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 SUPERFAMILY SSF53800 1 313 8.24E-91 T 22-04-2016 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 ProSitePatterns PS00534 Ferrochelatase signature. 180 198 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 Gene3D G3DSA:3.40.50.1400 190 313 3.5E-30 T 22-04-2016 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 PANTHER PTHR11108 3 311 1.0E-90 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 TIGRFAM TIGR00109 hemH: ferrochelatase 2 308 5.7E-81 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 Gene3D G3DSA:3.40.50.1400 2 189 4.4E-58 T 22-04-2016 LMES_RS01955 b699d4ca8c45a9f825f3519e455a86ed 315 Hamap MF_00323 Ferrochelatase [hemH]. 2 312 32.97 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 SUPERFAMILY SSF48179 168 298 2.95E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 238 250 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 SUPERFAMILY SSF51735 1 158 1.51E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 300 4.3E-120 T 22-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 Gene3D G3DSA:1.10.1040.10 172 279 5.8E-35 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 159 187 1.0E-31 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 1.0E-31 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 61 90 1.0E-31 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 1.0E-31 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 PANTHER PTHR11811:SF28 1 299 3.5E-141 T 22-04-2016 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 SMART SM01350 170 297 9.6E-6 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 Gene3D G3DSA:3.40.50.720 1 171 3.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 170 279 3.5E-24 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 PANTHER PTHR11811 1 299 3.5E-141 T 22-04-2016 LMES_RS02645 8b0e34f99be9ba6f47f3a89dc72ecba0 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 1.7E-40 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 PANTHER PTHR12383:SF21 2 187 1.7E-43 T 22-04-2016 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 SUPERFAMILY SSF51306 24 192 1.83E-47 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 92 2.97E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 26 42 2.97E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 149 168 2.97E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 188 3.8E-47 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 PANTHER PTHR12383 2 187 1.7E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 Pfam PF00717 Peptidase S24-like 32 102 1.7E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 ProSitePatterns PS00760 Signal peptidases I lysine active site. 82 94 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 ProSitePatterns PS00761 Signal peptidases I signature 3. 154 167 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 Gene3D G3DSA:2.10.109.10 149 194 4.5E-35 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 Gene3D G3DSA:2.10.109.10 22 90 4.5E-35 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LMES_RS05335 d71b0fa1fcc37030affb017d0d9d04c9 207 Pfam PF10502 Signal peptidase, peptidase S26 145 182 5.1E-6 T 22-04-2016 IPR019533 Peptidase S26 LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 SUPERFAMILY SSF102114 47 121 3.92E-8 T 22-04-2016 LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 PANTHER PTHR30352 9 186 3.6E-85 T 22-04-2016 LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 Pfam PF13353 4Fe-4S single cluster domain 35 174 4.4E-50 T 22-04-2016 LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 26 176 8.5E-53 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 PIRSF PIRSF000368 16 191 2.1E-70 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 Gene3D G3DSA:3.80.30.10 88 188 9.1E-12 T 22-04-2016 LMES_RS06845 ad634e817dc26d5c070b1843786c63e0 193 PANTHER PTHR30352:SF2 9 186 3.6E-85 T 22-04-2016 LMES_RS06500 0d11d7a3897022ba3a5908a519a6b088 176 PANTHER PTHR32315 11 176 1.0E-67 T 22-04-2016 LMES_RS06500 0d11d7a3897022ba3a5908a519a6b088 176 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 5 176 37.065 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 LMES_RS06500 0d11d7a3897022ba3a5908a519a6b088 176 Pfam PF00156 Phosphoribosyl transferase domain 47 151 5.3E-14 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS06500 0d11d7a3897022ba3a5908a519a6b088 176 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 5 176 6.2E-63 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 LMES_RS06500 0d11d7a3897022ba3a5908a519a6b088 176 Gene3D G3DSA:3.40.50.2020 5 176 6.4E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS06500 0d11d7a3897022ba3a5908a519a6b088 176 SUPERFAMILY SSF53271 6 166 1.25E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 Pfam PF00677 Lumazine binding domain 102 186 9.1E-18 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 Pfam PF00677 Lumazine binding domain 3 88 3.1E-15 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 Gene3D G3DSA:2.40.30.20 7 105 9.8E-25 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 Gene3D G3DSA:2.40.30.20 106 194 3.3E-23 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 PANTHER PTHR21098 1 192 9.4E-63 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 193 6.3E-55 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 SUPERFAMILY SSF63380 1 90 1.87E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 SUPERFAMILY SSF63380 94 194 7.23E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LMES_RS03960 9d51154c2a0dc0cd668ca0dfac6cc7b6 196 PIRSF PIRSF000498 1 195 3.2E-60 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 Pfam PF13538 UvrD-like helicase C-terminal domain 672 719 3.3E-17 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 8 747 26.225 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 SMART SM00382 345 620 0.0022 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 Gene3D G3DSA:3.40.50.300 293 526 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 Pfam PF14490 Helix-hairpin-helix containing domain 155 242 1.4E-20 T 22-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 PANTHER PTHR10887:SF284 672 726 4.7E-82 T 22-04-2016 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 PANTHER PTHR10887:SF284 34 46 4.7E-82 T 22-04-2016 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 PANTHER PTHR10887:SF284 329 597 4.7E-82 T 22-04-2016 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 11 744 6.8E-206 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 PANTHER PTHR10887 672 726 4.7E-82 T 22-04-2016 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 PANTHER PTHR10887 34 46 4.7E-82 T 22-04-2016 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 PANTHER PTHR10887 329 597 4.7E-82 T 22-04-2016 LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 SUPERFAMILY SSF52540 191 505 8.17E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 Gene3D G3DSA:3.40.50.300 663 757 1.2E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 SUPERFAMILY SSF52540 458 523 2.43E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 SUPERFAMILY SSF52540 562 744 2.43E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03345 fc05b637f81483cb3562bc4670446bb8 795 Pfam PF13604 AAA domain 331 528 1.3E-43 T 22-04-2016 LMES_RS05610 0a8ae477e47eafcc17d6d0601cc80698 224 Gene3D G3DSA:3.40.50.300 4 219 3.6E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05610 0a8ae477e47eafcc17d6d0601cc80698 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 215 9.9E-81 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LMES_RS05610 0a8ae477e47eafcc17d6d0601cc80698 224 Pfam PF02224 Cytidylate kinase 6 219 2.5E-77 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LMES_RS05610 0a8ae477e47eafcc17d6d0601cc80698 224 SUPERFAMILY SSF52540 1 221 2.14E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05610 0a8ae477e47eafcc17d6d0601cc80698 224 PANTHER PTHR21299 6 219 1.1E-64 T 22-04-2016 LMES_RS05610 0a8ae477e47eafcc17d6d0601cc80698 224 Hamap MF_00238 Cytidylate kinase [cmk]. 4 222 33.905 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 PANTHER PTHR10572 5 400 1.3E-102 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 Gene3D G3DSA:3.90.770.10 205 344 8.9E-76 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 Gene3D G3DSA:3.90.770.10 3 102 8.9E-76 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 Gene3D G3DSA:3.30.70.420 103 195 2.7E-27 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 34 354 3.9E-83 T 22-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 SUPERFAMILY SSF56542 3 105 3.92E-90 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 SUPERFAMILY SSF56542 200 397 3.92E-90 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 26 355 8.8E-90 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 SUPERFAMILY SSF55035 98 195 8.63E-24 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 283 304 2.0E-9 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 153 171 2.0E-9 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 65 85 2.0E-9 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 38 59 2.0E-9 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS01570 86c7fa7525498a18b94f1b6e514bd09c 401 PANTHER PTHR10572:SF6 5 400 1.3E-102 T 22-04-2016 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 Pfam PF00005 ABC transporter 347 496 1.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 SUPERFAMILY SSF90123 5 320 1.19E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 SMART SM00382 356 542 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 PANTHER PTHR24221:SF240 1 566 9.3E-170 T 22-04-2016 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 Gene3D G3DSA:1.20.1560.10 5 313 2.5E-52 T 22-04-2016 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 Pfam PF00664 ABC transporter transmembrane region 16 283 1.8E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 Gene3D G3DSA:3.40.50.300 330 557 2.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 PANTHER PTHR24221 1 566 9.3E-170 T 22-04-2016 LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 SUPERFAMILY SSF52540 324 566 2.61E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01820 ba20fd402f5bb8e904eb85fac8f11ee2 572 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS09010 710c46a5559ad786bc4562d00ecb3676 212 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 202 4.0E-23 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS09010 710c46a5559ad786bc4562d00ecb3676 212 SMART SM00934 5 203 2.8E-31 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS09010 710c46a5559ad786bc4562d00ecb3676 212 PANTHER PTHR35039:SF2 1 211 1.6E-79 T 22-04-2016 LMES_RS09010 710c46a5559ad786bc4562d00ecb3676 212 PANTHER PTHR35039 1 211 1.6E-79 T 22-04-2016 LMES_RS09010 710c46a5559ad786bc4562d00ecb3676 212 SUPERFAMILY SSF51366 1 208 1.97E-35 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS09010 710c46a5559ad786bc4562d00ecb3676 212 Gene3D G3DSA:3.20.20.70 1 212 9.9E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05570 57cffb20d04ed12d78fb5370498ce1c7 746 Pfam PF14262 Domain of unknown function (DUF4353) 223 454 5.9E-33 T 22-04-2016 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 LMES_RS05570 57cffb20d04ed12d78fb5370498ce1c7 746 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 14 34 5.4E-9 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 Gene3D G3DSA:3.20.20.100 7 276 1.6E-90 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PRINTS PR00069 Aldo-keto reductase signature 125 142 8.2E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PRINTS PR00069 Aldo-keto reductase signature 93 111 8.2E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PRINTS PR00069 Aldo-keto reductase signature 197 221 8.2E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PRINTS PR00069 Aldo-keto reductase signature 37 61 8.2E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PRINTS PR00069 Aldo-keto reductase signature 159 188 8.2E-42 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 Pfam PF00248 Aldo/keto reductase family 18 261 3.4E-43 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 SUPERFAMILY SSF51430 7 266 2.75E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PANTHER PTHR11732 3 279 9.8E-114 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 PIRSF PIRSF000097 1 280 2.5E-75 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04180 33e973499acfbdb8f981d45bd227ed9e 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 PANTHER PTHR36174:SF2 1 416 3.0E-103 T 22-04-2016 LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 SUPERFAMILY SSF55729 168 245 1.84E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 SUPERFAMILY SSF55729 312 408 1.84E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 PANTHER PTHR36174 1 416 3.0E-103 T 22-04-2016 LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 SUPERFAMILY SSF46589 245 308 7.85E-7 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 Gene3D G3DSA:3.40.630.30 167 244 1.7E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 Gene3D G3DSA:3.40.630.30 311 387 1.7E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 Pfam PF02388 FemAB family 8 412 6.2E-138 T 22-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 Gene3D G3DSA:3.40.630.30 4 166 3.4E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01530 c67de418ab130f15f177bd4febabe424 417 SUPERFAMILY SSF55729 3 163 7.21E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08645 1bf869161bdc66eb22a8fdc443e765ce 426 Pfam PF07690 Major Facilitator Superfamily 15 375 1.7E-8 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08645 1bf869161bdc66eb22a8fdc443e765ce 426 SUPERFAMILY SSF103473 6 411 3.4E-22 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS03360 c4cc752dedf5530cf8b3911c041bcdf1 330 Pfam PF00248 Aldo/keto reductase family 28 328 2.4E-59 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS03360 c4cc752dedf5530cf8b3911c041bcdf1 330 SUPERFAMILY SSF51430 13 328 1.28E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS03360 c4cc752dedf5530cf8b3911c041bcdf1 330 PANTHER PTHR11732:SF191 13 330 2.1E-129 T 22-04-2016 LMES_RS03360 c4cc752dedf5530cf8b3911c041bcdf1 330 Gene3D G3DSA:3.20.20.100 14 328 9.0E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS03360 c4cc752dedf5530cf8b3911c041bcdf1 330 PANTHER PTHR11732 13 330 2.1E-129 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 Gene3D G3DSA:3.40.50.2300 2 122 4.7E-31 T 22-04-2016 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 SMART SM00421 149 206 8.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.6E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.6E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.6E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 SUPERFAMILY SSF52172 3 133 1.04E-32 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 Pfam PF00072 Response regulator receiver domain 5 116 2.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 PANTHER PTHR26402:SF458 3 215 7.4E-55 T 22-04-2016 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 SUPERFAMILY SSF46894 143 213 2.55E-15 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 Gene3D G3DSA:1.10.10.10 123 213 4.7E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 7.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 SMART SM00448 3 116 4.7E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS05010 88c83249eb2608720453c01c0525e1af 215 PANTHER PTHR26402 3 215 7.4E-55 T 22-04-2016 LMES_RS05025 f37f2a9623ceeed08ac361bcfe107902 153 PANTHER PTHR23091 1 147 3.1E-31 T 22-04-2016 LMES_RS05025 f37f2a9623ceeed08ac361bcfe107902 153 SUPERFAMILY SSF55729 2 147 2.34E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS05025 f37f2a9623ceeed08ac361bcfe107902 153 PANTHER PTHR23091:SF244 1 147 3.1E-31 T 22-04-2016 LMES_RS05025 f37f2a9623ceeed08ac361bcfe107902 153 Gene3D G3DSA:3.40.630.30 2 151 1.6E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS05025 f37f2a9623ceeed08ac361bcfe107902 153 Pfam PF00583 Acetyltransferase (GNAT) family 67 143 7.3E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS05305 e46938c9755ca05209f2dd92d440d4bf 210 SUPERFAMILY SSF53271 12 209 6.03E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS05305 e46938c9755ca05209f2dd92d440d4bf 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 30.127 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05305 e46938c9755ca05209f2dd92d440d4bf 210 Pfam PF00156 Phosphoribosyl transferase domain 51 153 1.2E-16 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS05305 e46938c9755ca05209f2dd92d440d4bf 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 12 180 3.7E-45 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 LMES_RS05305 e46938c9755ca05209f2dd92d440d4bf 210 Gene3D G3DSA:3.40.50.2020 2 209 2.0E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS05305 e46938c9755ca05209f2dd92d440d4bf 210 PANTHER PTHR19278 1 210 2.4E-67 T 22-04-2016 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 Pfam PF04918 DltD central region 101 266 8.4E-47 T 22-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 PANTHER PTHR40039:SF1 4 425 3.8E-104 T 22-04-2016 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 PIRSF PIRSF021438 3 397 8.5E-128 T 22-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 Pfam PF04914 DltD C-terminal region 268 395 6.1E-49 T 22-04-2016 IPR006998 DltD, C-terminal UniPathway: UPA00556 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 11 394 5.1E-130 T 22-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 Pfam PF04915 DltD N-terminal region 39 100 2.8E-26 T 22-04-2016 IPR006999 DltD, N-terminal UniPathway: UPA00556 LMES_RS08145 5e60d1701ecbe3406f46b8d52922e450 428 PANTHER PTHR40039 4 425 3.8E-104 T 22-04-2016 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 Pfam PF00875 DNA photolyase 3 160 9.4E-36 T 22-04-2016 IPR006050 DNA photolyase, N-terminal LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 Pfam PF03441 FAD binding domain of DNA photolyase 265 464 6.4E-81 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 PRINTS PR00147 DNA photolyase signature 139 155 2.8E-31 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 PRINTS PR00147 DNA photolyase signature 373 387 2.8E-31 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 PRINTS PR00147 DNA photolyase signature 334 352 2.8E-31 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 PRINTS PR00147 DNA photolyase signature 314 330 2.8E-31 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 Gene3D G3DSA:1.25.40.80 148 271 5.2E-33 T 22-04-2016 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 314 326 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 SUPERFAMILY SSF48173 198 468 2.49E-110 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 Gene3D G3DSA:1.10.579.10 272 466 2.0E-77 T 22-04-2016 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 Gene3D G3DSA:3.40.50.620 2 147 2.1E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 334 353 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 PANTHER PTHR11455 1 465 8.2E-168 T 22-04-2016 LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 SUPERFAMILY SSF52425 3 179 6.93E-36 T 22-04-2016 IPR006050 DNA photolyase, N-terminal LMES_RS03900 c385d1328ff43dc114c47502c67a786f 470 PANTHER PTHR11455:SF18 1 465 8.2E-168 T 22-04-2016 LMES_RS02415 21455ba147fbd932d45766828e191ff4 590 PANTHER PTHR37417 1 587 0.0 T 22-04-2016 LMES_RS02415 21455ba147fbd932d45766828e191ff4 590 SUPERFAMILY SSF51905 26 291 3.29E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS02415 21455ba147fbd932d45766828e191ff4 590 Pfam PF06100 MCRA family 22 521 1.8E-210 T 22-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 LMES_RS02415 21455ba147fbd932d45766828e191ff4 590 Gene3D G3DSA:3.50.50.60 226 313 3.6E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS02415 21455ba147fbd932d45766828e191ff4 590 Gene3D G3DSA:3.50.50.60 27 137 3.6E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS02415 21455ba147fbd932d45766828e191ff4 590 PANTHER PTHR37417:SF1 1 587 0.0 T 22-04-2016 LMES_RS05945 82f6c8c34e14495005d93dc1ddb93953 204 SMART SM01207 9 184 1.3E-78 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LMES_RS05945 82f6c8c34e14495005d93dc1ddb93953 204 PANTHER PTHR30309 1 191 6.9E-69 T 22-04-2016 LMES_RS05945 82f6c8c34e14495005d93dc1ddb93953 204 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 183 2.4E-49 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LMES_RS05945 82f6c8c34e14495005d93dc1ddb93953 204 PANTHER PTHR30309:SF0 1 191 6.9E-69 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LMES_RS05945 82f6c8c34e14495005d93dc1ddb93953 204 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 192 19.08 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LMES_RS05945 82f6c8c34e14495005d93dc1ddb93953 204 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 191 1.7E-56 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LMES_RS01660 140648c8773eabbd3f8f9c7f8cc5b6a8 444 Gene3D G3DSA:3.40.710.10 21 331 5.4E-52 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS01660 140648c8773eabbd3f8f9c7f8cc5b6a8 444 SUPERFAMILY SSF56601 10 331 6.96E-41 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS01660 140648c8773eabbd3f8f9c7f8cc5b6a8 444 PANTHER PTHR21581:SF11 53 440 2.3E-32 T 22-04-2016 LMES_RS01660 140648c8773eabbd3f8f9c7f8cc5b6a8 444 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 53 307 2.6E-35 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LMES_RS01660 140648c8773eabbd3f8f9c7f8cc5b6a8 444 PANTHER PTHR21581 53 440 2.3E-32 T 22-04-2016 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 180 18.108 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 SUPERFAMILY SSF47928 8 108 2.48E-20 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 4.2E-22 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 PRINTS PR00125 ATP synthase delta subunit signature 76 87 4.2E-22 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 PRINTS PR00125 ATP synthase delta subunit signature 8 27 4.2E-22 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 PRINTS PR00125 ATP synthase delta subunit signature 87 101 4.2E-22 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 4.2E-22 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 178 1.4E-35 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 PANTHER PTHR11910 12 178 5.3E-35 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 8 178 4.2E-44 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LMES_RS08410 d1165c685dcf15f6b44d76d618d8cc2e 180 Gene3D G3DSA:1.10.520.20 5 107 2.3E-21 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain LMES_RS07130 408d5fdf899649f6c9d90217b82ec82b 390 Pfam PF01098 Cell cycle protein 14 373 2.0E-76 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LMES_RS07130 408d5fdf899649f6c9d90217b82ec82b 390 PANTHER PTHR30474 3 389 3.8E-88 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LMES_RS07130 408d5fdf899649f6c9d90217b82ec82b 390 PANTHER PTHR30474:SF2 3 389 3.8E-88 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 SUPERFAMILY SSF51726 8 397 6.41E-92 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 7 319 4.5E-107 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 434 754 2.3E-141 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 PANTHER PTHR30519 3 765 0.0 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 Gene3D G3DSA:3.20.20.210 6 392 4.9E-119 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 Gene3D G3DSA:3.20.20.210 396 762 8.6E-120 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 PIRSF PIRSF000382 4 765 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 PANTHER PTHR30519:SF0 3 765 0.0 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 5 761 32.937 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 SUPERFAMILY SSF51726 399 756 4.58E-108 T 22-04-2016 LMES_RS08055 85e4e70bcc0c6c3772651d71acf2d6b5 765 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 10 754 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 PANTHER PTHR24220 18 376 2.4E-162 T 22-04-2016 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 SUPERFAMILY SSF50331 249 354 6.8E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 Pfam PF08402 TOBE domain 285 353 6.2E-10 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 47 328 4.7E-107 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 PANTHER PTHR24220:SF150 18 376 2.4E-162 T 22-04-2016 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 SUPERFAMILY SSF52540 17 253 8.25E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 Gene3D G3DSA:3.40.50.300 11 250 8.0E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 Pfam PF00005 ABC transporter 32 174 2.0E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00875 0411cf9bd351db35570feca3d19fcf1d 376 SMART SM00382 41 224 1.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 445 455 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 Gene3D G3DSA:2.40.50.140 12 83 4.0E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 392 423 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 SUPERFAMILY SSF50249 12 70 4.97E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 Gene3D G3DSA:3.40.50.150 263 461 2.9E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 PANTHER PTHR11061:SF30 13 463 2.3E-116 T 22-04-2016 LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 100 459 2.5E-22 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 29 455 9.0E-107 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 PANTHER PTHR11061 13 463 2.3E-116 T 22-04-2016 LMES_RS02150 5cf5d428526648005a18baf25cfcc06d 463 SUPERFAMILY SSF53335 91 462 1.17E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 PRINTS PR01467 Bacterial arginine repressor signature 88 101 3.7E-11 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 PRINTS PR01467 Bacterial arginine repressor signature 21 34 3.7E-11 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 PRINTS PR01467 Bacterial arginine repressor signature 37 52 3.7E-11 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 PRINTS PR01467 Bacterial arginine repressor signature 118 133 3.7E-11 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 Hamap MF_00173 Arginine repressor [argR]. 1 151 50.697 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 PANTHER PTHR34471:SF1 1 150 4.8E-36 T 22-04-2016 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 Gene3D G3DSA:1.10.10.10 1 69 5.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 Gene3D G3DSA:3.30.1360.40 74 148 1.3E-17 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 PANTHER PTHR34471 1 150 4.8E-36 T 22-04-2016 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 Pfam PF02863 Arginine repressor, C-terminal domain 80 146 8.3E-13 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 Pfam PF01316 Arginine repressor, DNA binding domain 1 68 1.8E-19 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 SUPERFAMILY SSF55252 80 148 5.89E-15 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 LMES_RS07160 eff33c5ce4aa06f8f3974f387111c646 151 SUPERFAMILY SSF46785 1 71 8.16E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 SUPERFAMILY SSF46785 5 60 3.99E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 SUPERFAMILY SSF50037 274 316 3.3E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 316 2.3E-40 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Pfam PF02237 Biotin protein ligase C terminal domain 274 317 5.4E-7 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Gene3D G3DSA:3.30.930.10 77 265 3.2E-44 T 22-04-2016 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 204 3.2E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Gene3D G3DSA:1.10.10.10 2 62 2.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 SUPERFAMILY SSF55681 76 262 3.08E-42 T 22-04-2016 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Gene3D G3DSA:2.30.30.100 274 315 2.2E-9 T 22-04-2016 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Pfam PF08279 HTH domain 5 58 5.0E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 318 28.975 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 LMES_RS01405 923a3bf209422ceb7ed34d425d71176a 327 PANTHER PTHR12835 5 316 7.8E-40 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 SMART SM01097 1 131 1.7E-67 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PANTHER PTHR11405 1 356 1.4E-120 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 SUPERFAMILY SSF52317 138 354 9.38E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 Gene3D G3DSA:3.50.30.20 3 141 2.1E-49 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 SUPERFAMILY SSF52021 3 142 9.94E-49 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 352 4.9E-109 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 212 221 4.8E-7 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 4.8E-7 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 326 339 4.8E-7 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 Pfam PF00117 Glutamine amidotransferase class-I 172 349 2.2E-26 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 355 37.522 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 Gene3D G3DSA:3.40.50.880 143 353 5.0E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 7.1E-44 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PANTHER PTHR11405:SF4 1 356 1.4E-120 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 1.1E-22 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 170 184 1.1E-22 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 209 223 1.1E-22 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 1.1E-22 T 22-04-2016 LMES_RS05975 8a9487602dfdd2c2d018f8723f959ef6 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 1.1E-22 T 22-04-2016 LMES_RS02000 7f4ac12bdfe4e08208100ab687e8454e 182 SUPERFAMILY SSF46689 7 71 4.24E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS02000 7f4ac12bdfe4e08208100ab687e8454e 182 Gene3D G3DSA:1.10.10.60 4 40 3.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS02000 7f4ac12bdfe4e08208100ab687e8454e 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 59 2.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS02000 7f4ac12bdfe4e08208100ab687e8454e 182 Gene3D G3DSA:1.10.357.10 41 93 8.2E-10 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS01800 1f14d6a119669612315e94879c5022dd 164 SUPERFAMILY SSF55811 15 140 2.3E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS01800 1f14d6a119669612315e94879c5022dd 164 Pfam PF00293 NUDIX domain 22 142 2.6E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LMES_RS01800 1f14d6a119669612315e94879c5022dd 164 PRINTS PR00502 NUDIX hydrolase family signature 47 61 4.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LMES_RS01800 1f14d6a119669612315e94879c5022dd 164 PRINTS PR00502 NUDIX hydrolase family signature 61 76 4.2E-5 T 22-04-2016 IPR020476 NUDIX hydrolase LMES_RS01800 1f14d6a119669612315e94879c5022dd 164 PANTHER PTHR22769 21 130 7.0E-14 T 22-04-2016 LMES_RS01800 1f14d6a119669612315e94879c5022dd 164 Gene3D G3DSA:3.90.79.10 6 134 3.1E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 PANTHER PTHR32219:SF5 8 265 3.4E-54 T 22-04-2016 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 Gene3D G3DSA:3.10.290.10 186 241 3.4E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 PANTHER PTHR32219 8 265 3.4E-54 T 22-04-2016 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 Pfam PF01479 S4 domain 189 234 2.0E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 SUPERFAMILY SSF55174 185 256 1.31E-30 T 22-04-2016 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 SUPERFAMILY SSF55174 40 131 1.31E-30 T 22-04-2016 LMES_RS06580 accadb949807e77ac8875ba0d33898fd 265 SMART SM00363 188 255 3.3E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 137 154 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 PRINTS PR00069 Aldo-keto reductase signature 106 124 1.4E-14 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 PRINTS PR00069 Aldo-keto reductase signature 232 256 1.4E-14 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 PRINTS PR00069 Aldo-keto reductase signature 137 154 1.4E-14 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 Gene3D G3DSA:3.20.20.100 13 301 1.1E-81 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 Pfam PF00248 Aldo/keto reductase family 13 297 9.4E-67 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 SUPERFAMILY SSF51430 13 301 3.93E-79 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04055 a5b0b4f13b97ad9af2fb1d3e1bde26e9 302 PANTHER PTHR11732 13 302 3.7E-95 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS08775 eb297d00a3be4f289cbfdd5c7d431073 150 SUPERFAMILY SSF46785 2 137 2.57E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08775 eb297d00a3be4f289cbfdd5c7d431073 150 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 137 3.8E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LMES_RS08775 eb297d00a3be4f289cbfdd5c7d431073 150 Pfam PF02082 Transcriptional regulator 1 83 3.5E-20 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LMES_RS08775 eb297d00a3be4f289cbfdd5c7d431073 150 PANTHER PTHR33221 2 149 1.3E-30 T 22-04-2016 LMES_RS08775 eb297d00a3be4f289cbfdd5c7d431073 150 PANTHER PTHR33221:SF6 2 149 1.3E-30 T 22-04-2016 LMES_RS08775 eb297d00a3be4f289cbfdd5c7d431073 150 Gene3D G3DSA:1.10.10.10 1 137 1.6E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 SMART SM00327 141 400 2.3E-13 T 22-04-2016 IPR002035 von Willebrand factor, type A LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 Gene3D G3DSA:2.60.40.10 762 813 5.5E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 SUPERFAMILY SSF49478 760 833 3.18E-9 T 22-04-2016 LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 Pfam PF05738 Cna protein B-type domain 669 703 1.6E-6 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 Pfam PF05738 Cna protein B-type domain 770 831 1.6E-13 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 Pfam PF13519 von Willebrand factor type A domain 144 269 4.2E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 Gene3D G3DSA:2.60.40.1140 529 631 1.8E-9 T 22-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 SUPERFAMILY SSF49478 528 630 2.75E-11 T 22-04-2016 LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 SUPERFAMILY SSF53300 140 282 3.86E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A LMES_RS06835 f66ac047e9c552f53183874cab5fd37e 906 Gene3D G3DSA:3.40.50.410 140 281 2.7E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Gene3D G3DSA:3.30.460.10 183 330 2.5E-47 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Pfam PF13328 HD domain 31 180 7.4E-51 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 SMART SM00954 241 351 1.3E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Pfam PF02824 TGS domain 399 458 1.3E-16 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 SUPERFAMILY SSF81301 185 403 1.13E-61 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Gene3D G3DSA:3.10.20.30 399 460 2.5E-18 T 22-04-2016 IPR012675 Beta-grasp domain LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 SUPERFAMILY SSF55021 669 743 8.01E-7 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 SUPERFAMILY SSF81271 387 459 1.79E-18 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 SMART SM00471 46 158 1.8E-11 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 SUPERFAMILY SSF109604 11 195 4.92E-74 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 PANTHER PTHR21262 11 745 0.0 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Gene3D G3DSA:3.30.70.260 668 741 5.6E-7 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Pfam PF04607 Region found in RelA / SpoT proteins 241 350 7.6E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 Pfam PF13291 ACT domain 667 742 1.5E-18 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 PANTHER PTHR21262:SF0 11 745 0.0 T 22-04-2016 LMES_RS05955 c4a356cb0544b492a97a8b47bd75e09c 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 742 3.2E-237 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 LMES_RS06895 91bc2a547245e7dddb7258245ffe34c6 114 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 88 6.7E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LMES_RS06895 91bc2a547245e7dddb7258245ffe34c6 114 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 3 88 20.884 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LMES_RS06895 91bc2a547245e7dddb7258245ffe34c6 114 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 89 2.3E-14 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LMES_RS06895 91bc2a547245e7dddb7258245ffe34c6 114 SUPERFAMILY SSF101386 5 92 2.8E-23 T 22-04-2016 LMES_RS06895 91bc2a547245e7dddb7258245ffe34c6 114 PANTHER PTHR21256 1 91 1.7E-34 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 Gene3D G3DSA:3.30.70.360 179 295 7.2E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 PIRSF PIRSF005962 2 383 6.1E-96 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 PANTHER PTHR11014 6 384 9.2E-139 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 Gene3D G3DSA:3.40.630.10 5 176 5.9E-72 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 Gene3D G3DSA:3.40.630.10 296 380 5.9E-72 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 SUPERFAMILY SSF55031 180 287 4.71E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 366 4.2E-90 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 PANTHER PTHR11014:SF98 6 384 9.2E-139 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 Pfam PF07687 Peptidase dimerisation domain 180 279 1.3E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 SUPERFAMILY SSF53187 6 195 2.62E-63 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 SUPERFAMILY SSF53187 297 376 2.62E-63 T 22-04-2016 LMES_RS03210 bcbb7404fc05ba52cb808a19d3e9d978 384 Pfam PF01546 Peptidase family M20/M25/M40 72 377 1.5E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 Gene3D G3DSA:3.40.190.10 43 126 7.2E-37 T 22-04-2016 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 Gene3D G3DSA:3.40.190.10 231 266 7.2E-37 T 22-04-2016 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 Gene3D G3DSA:1.10.3720.10 284 487 1.2E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 SUPERFAMILY SSF161098 285 471 1.3E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 266 3.2E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 Gene3D G3DSA:3.40.190.10 127 222 1.7E-17 T 22-04-2016 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 PANTHER PTHR30614 37 490 4.2E-215 T 22-04-2016 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 304 486 4.9E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 SMART SM00079 46 266 0.0029 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 72 85 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 PANTHER PTHR30614:SF15 37 490 4.2E-215 T 22-04-2016 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 SMART SM00062 46 271 1.3E-45 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 SUPERFAMILY SSF53850 17 266 2.79E-62 T 22-04-2016 LMES_RS03145 ae88a5cc9368c10f29f9df0f4c8ddc0a 490 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 285 380 5.9E-27 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SMART SM00316 19 94 2.8E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SMART SM00316 195 265 4.0E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SMART SM00316 280 351 3.3E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SMART SM00316 108 176 2.6E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Pfam PF00575 S1 RNA binding domain 19 84 4.0E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Pfam PF00575 S1 RNA binding domain 108 176 1.9E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Pfam PF00575 S1 RNA binding domain 194 265 5.8E-26 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Pfam PF00575 S1 RNA binding domain 280 351 1.1E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SUPERFAMILY SSF50249 109 189 4.82E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Gene3D G3DSA:2.40.50.140 276 356 2.7E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PANTHER PTHR10724 1 357 1.3E-91 T 22-04-2016 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SUPERFAMILY SSF50249 9 105 4.1E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SUPERFAMILY SSF50249 265 355 4.58E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Gene3D G3DSA:2.40.50.140 13 95 6.9E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Gene3D G3DSA:2.40.50.140 107 178 8.5E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 217 238 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 295 314 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 334 352 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 131 148 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 113 129 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PRINTS PR00681 Ribosomal protein S1 signature 160 180 4.2E-41 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 Gene3D G3DSA:2.40.50.140 197 275 3.7E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 SUPERFAMILY SSF50249 195 281 7.86E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05605 e2306f147f4037ffb41ee7009e94a6bb 396 PANTHER PTHR10724:SF6 1 357 1.3E-91 T 22-04-2016 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 PANTHER PTHR23500 14 473 1.2E-143 T 22-04-2016 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 462 2.6E-103 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 SUPERFAMILY SSF103473 9 463 5.75E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 Gene3D G3DSA:1.20.1250.20 15 201 4.9E-25 T 22-04-2016 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 Gene3D G3DSA:1.20.1250.20 256 461 1.4E-14 T 22-04-2016 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 Pfam PF00083 Sugar (and other) transporter 15 465 1.1E-105 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 PRINTS PR00171 Sugar transporter signature 265 275 1.2E-26 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 PRINTS PR00171 Sugar transporter signature 20 30 1.2E-26 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 PRINTS PR00171 Sugar transporter signature 105 124 1.2E-26 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 PRINTS PR00171 Sugar transporter signature 379 391 1.2E-26 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS00570 e905cc566dcabddc7bcf27b591ea9748 484 PRINTS PR00171 Sugar transporter signature 356 377 1.2E-26 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 PANTHER PTHR23105:SF5 22 230 3.5E-75 T 22-04-2016 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 122 140 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 Gene3D G3DSA:3.30.190.20 162 228 1.4E-41 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 Gene3D G3DSA:3.30.190.20 18 69 1.4E-41 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 41.452 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 PANTHER PTHR23105 22 230 3.5E-75 T 22-04-2016 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 229 1.2E-97 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 Gene3D G3DSA:3.40.50.790 70 160 9.9E-42 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 PIRSF PIRSF002155 2 228 2.3E-73 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 SUPERFAMILY SSF56808 8 228 1.83E-77 T 22-04-2016 IPR023674 Ribosomal protein L1-like LMES_RS01250 4d1670947eb3a9b4a6c8a863afa41434 230 Pfam PF00687 Ribosomal protein L1p/L10e family 36 221 9.4E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 PANTHER PTHR12001 3 247 1.4E-62 T 22-04-2016 IPR017446 Polyprenyl synthetase-related LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 230 242 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 PANTHER PTHR12001:SF23 3 247 1.4E-62 T 22-04-2016 LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 SUPERFAMILY SSF48576 5 282 2.06E-60 T 22-04-2016 IPR008949 Isoprenoid synthase domain LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 Pfam PF00348 Polyprenyl synthetase 32 247 6.4E-42 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LMES_RS07170 ce6e8d2a41473fd9fd3a85114d94af33 304 Gene3D G3DSA:1.10.600.10 2 295 4.3E-73 T 22-04-2016 IPR008949 Isoprenoid synthase domain LMES_RS08650 bfb7f3e1c77565921c59700618565a23 110 Gene3D G3DSA:3.10.180.10 10 106 2.5E-5 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LMES_RS08650 bfb7f3e1c77565921c59700618565a23 110 SUPERFAMILY SSF54593 1 108 2.13E-8 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 SUPERFAMILY SSF53067 127 304 4.1E-33 T 22-04-2016 LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 Gene3D G3DSA:3.30.420.150 128 304 5.9E-40 T 22-04-2016 LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 Pfam PF02541 Ppx/GppA phosphatase family 23 303 4.3E-56 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 PANTHER PTHR30005 3 307 4.3E-64 T 22-04-2016 LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 SUPERFAMILY SSF53067 4 125 4.21E-28 T 22-04-2016 LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 Gene3D G3DSA:3.30.420.40 1 123 1.7E-33 T 22-04-2016 LMES_RS01565 1e27daa6d7211c943b3f3d25df8bdb28 307 PANTHER PTHR30005:SF0 3 307 4.3E-64 T 22-04-2016 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 PANTHER PTHR21708:SF24 1 305 4.3E-60 T 22-04-2016 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 SUPERFAMILY SSF48179 175 301 8.84E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 PANTHER PTHR21708 1 305 4.3E-60 T 22-04-2016 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 Gene3D G3DSA:3.40.50.720 1 183 1.2E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 1.3E-36 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 175 301 1.9E-30 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 301 4.2E-69 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 SUPERFAMILY SSF51735 1 158 4.43E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06520 daaad4c75be226961a80ff26968f51f8 317 Gene3D G3DSA:1.10.1040.10 184 304 2.8E-32 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS03905 7a925634201c890992ce921c48617b6e 348 PANTHER PTHR30572:SF11 1 348 1.9E-39 T 22-04-2016 LMES_RS03905 7a925634201c890992ce921c48617b6e 348 PANTHER PTHR30572 1 348 1.9E-39 T 22-04-2016 LMES_RS03905 7a925634201c890992ce921c48617b6e 348 Pfam PF02687 FtsX-like permease family 231 342 5.8E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 SUPERFAMILY SSF53613 16 262 2.62E-44 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 Gene3D G3DSA:3.40.1190.20 15 262 8.5E-57 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PIRSF PIRSF000513 6 272 7.5E-72 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 Pfam PF02110 Hydroxyethylthiazole kinase family 15 256 2.9E-46 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PANTHER PTHR20857:SF19 15 271 7.3E-45 T 22-04-2016 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PANTHER PTHR20857 15 271 7.3E-45 T 22-04-2016 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 7 269 23.414 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 1.31E-22 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 1.31E-22 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 169 186 1.31E-22 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 118 132 1.31E-22 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 1.31E-22 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS04530 d5dcecbdcbacbd006cd822e954a73d86 273 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 1.31E-22 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS08080 d233e546ef2e36092d4ba9a10b0f3984 375 SUPERFAMILY SSF51726 12 375 7.98E-85 T 22-04-2016 LMES_RS08080 d233e546ef2e36092d4ba9a10b0f3984 375 Gene3D G3DSA:3.20.20.210 8 375 6.8E-115 T 22-04-2016 LMES_RS08080 d233e546ef2e36092d4ba9a10b0f3984 375 PANTHER PTHR30519:SF3 13 375 2.1E-129 T 22-04-2016 LMES_RS08080 d233e546ef2e36092d4ba9a10b0f3984 375 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 14 72 3.6E-6 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08080 d233e546ef2e36092d4ba9a10b0f3984 375 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 169 349 1.5E-7 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LMES_RS08080 d233e546ef2e36092d4ba9a10b0f3984 375 PANTHER PTHR30519 13 375 2.1E-129 T 22-04-2016 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 18 35 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 Pfam PF00367 phosphotransferase system, EIIB 8 40 5.1E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 466 2.2E-179 T 22-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 SUPERFAMILY SSF55604 7 81 8.5E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 Gene3D G3DSA:2.70.70.10 489 640 1.9E-61 T 22-04-2016 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 493 617 7.0E-53 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 Pfam PF02378 Phosphotransferase system, EIIC 111 408 4.9E-51 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 496 614 2.5E-47 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 27 111 9.6E-14 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 Gene3D G3DSA:3.30.1360.60 2 82 8.7E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 556 568 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 SUPERFAMILY SSF51261 491 639 6.8E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 PANTHER PTHR30175 1 589 7.6E-186 T 22-04-2016 LMES_RS01340 b67553f7ffe3d105c0dcb6b0e3f19d26 653 PANTHER PTHR30175:SF7 1 589 7.6E-186 T 22-04-2016 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 5 477 35.14 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 146 160 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 SUPERFAMILY SSF89095 302 402 2.62E-29 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 SMART SM00845 330 476 2.2E-68 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 SUPERFAMILY SSF55931 7 298 1.63E-111 T 22-04-2016 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 Pfam PF02637 GatB domain 330 476 5.2E-46 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 Pfam PF02934 GatB/GatE catalytic domain 9 291 3.4E-102 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 PANTHER PTHR11659:SF0 5 479 3.0E-214 T 22-04-2016 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 PANTHER PTHR11659 5 479 3.0E-214 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 LMES_RS07055 7a4eb50f107f662ad7352f02daf0b025 479 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 5 476 2.3E-157 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 SUPERFAMILY SSF81330 10 117 2.75E-31 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 120 1.2E-41 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 PANTHER PTHR30266 1 122 4.7E-38 T 22-04-2016 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 121 1.6E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 86 95 1.7E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 77 85 1.7E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.7E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 PANTHER PTHR30266:SF2 1 122 4.7E-38 T 22-04-2016 LMES_RS02970 06aad959f3dedf413de3f21cc44d4951 127 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 124 22.36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS09365 0f47e334cb0244dd1162d109c166b5cb 278 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 64 247 1.3E-56 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LMES_RS09365 0f47e334cb0244dd1162d109c166b5cb 278 Pfam PF02096 60Kd inner membrane protein 65 247 8.8E-50 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LMES_RS09365 0f47e334cb0244dd1162d109c166b5cb 278 PANTHER PTHR12428 3 249 3.1E-55 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LMES_RS09365 0f47e334cb0244dd1162d109c166b5cb 278 PRINTS PR00701 60kDa inner membrane protein signature 130 153 8.2E-10 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LMES_RS09365 0f47e334cb0244dd1162d109c166b5cb 278 PRINTS PR00701 60kDa inner membrane protein signature 214 237 8.2E-10 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LMES_RS09365 0f47e334cb0244dd1162d109c166b5cb 278 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 8 251 27.82 T 22-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 201 2.0E-64 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 SUPERFAMILY SSF52317 3 202 3.51E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 Pfam PF00117 Glutamine amidotransferase class-I 5 190 3.8E-20 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 PIRSF PIRSF000495 1 204 2.4E-73 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 201 34.239 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 Gene3D G3DSA:3.40.50.880 2 203 5.9E-76 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 PANTHER PTHR21235:SF1 3 205 1.6E-80 T 22-04-2016 LMES_RS06915 33433813da453a5143c59a71aec3f5c4 205 PANTHER PTHR21235 3 205 1.6E-80 T 22-04-2016 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 326 34.947 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 Gene3D G3DSA:3.40.50.720 1 187 7.9E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02870 27ab719ec3378600e722764c1e162311 336 SUPERFAMILY SSF51735 3 182 1.53E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02870 27ab719ec3378600e722764c1e162311 336 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 164 2.4E-49 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 1.2E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.2E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 1.2E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.2E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 1.2E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 1.2E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PIRSF PIRSF000114 1 336 1.7E-107 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 324 4.6E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 SUPERFAMILY SSF48179 184 335 6.97E-54 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 PANTHER PTHR11728 3 335 4.5E-127 T 22-04-2016 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 Gene3D G3DSA:1.10.1040.10 188 330 8.8E-57 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS02870 27ab719ec3378600e722764c1e162311 336 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 207 4.1E-50 T 22-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 16 118 2.9E-19 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 SMART SM00983 143 206 7.1E-17 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 Gene3D G3DSA:3.40.50.10240 2 118 3.7E-26 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 SUPERFAMILY SSF63999 3 130 6.93E-31 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 148 205 9.8E-10 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 PANTHER PTHR41299:SF1 2 214 1.0E-37 T 22-04-2016 LMES_RS06675 a88dc9a8a50a9d68c9f2b4895240d7dc 219 PANTHER PTHR41299 2 214 1.0E-37 T 22-04-2016 LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 321 1.3E-18 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 Gene3D G3DSA:3.40.50.720 116 293 7.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 PANTHER PTHR10996:SF161 1 321 5.5E-74 T 22-04-2016 LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 Gene3D G3DSA:3.40.50.720 1 115 3.8E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 SUPERFAMILY SSF51735 106 291 6.79E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 PANTHER PTHR10996 1 321 5.5E-74 T 22-04-2016 LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 290 2.6E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS01760 61e0006ccc501fdd4c5e7e5f7ee2e64a 323 SUPERFAMILY SSF52283 2 126 2.0E-24 T 22-04-2016 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Gene3D G3DSA:1.10.260.30 328 430 1.0E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 453 33.588 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Gene3D G3DSA:3.40.50.300 95 298 5.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 PANTHER PTHR11564 1 434 6.8E-245 T 22-04-2016 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 SUPERFAMILY SSF52540 43 355 1.56E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Pfam PF02978 Signal peptide binding domain 328 427 4.1E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 SMART SM00962 101 297 2.0E-113 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 SMART SM00382 100 278 1.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.5E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 PANTHER PTHR11564:SF7 1 434 6.8E-245 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 SUPERFAMILY SSF47446 328 429 8.34E-36 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 3.6E-74 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 Gene3D G3DSA:1.20.120.140 3 90 3.9E-34 T 22-04-2016 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 SMART SM00963 2 87 3.3E-31 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06970 6221016684e8a4a415b170082c2bbf8b 491 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 4.7E-182 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LMES_RS01965 90b560947ef7bb7921b75c508fcc4cc7 482 Pfam PF00860 Permease family 196 441 2.1E-16 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS01965 90b560947ef7bb7921b75c508fcc4cc7 482 PANTHER PTHR11119 198 468 1.1E-109 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS01965 90b560947ef7bb7921b75c508fcc4cc7 482 PANTHER PTHR11119 1 173 1.1E-109 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS01965 90b560947ef7bb7921b75c508fcc4cc7 482 PANTHER PTHR11119:SF9 198 468 1.1E-109 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LMES_RS01965 90b560947ef7bb7921b75c508fcc4cc7 482 PANTHER PTHR11119:SF9 1 173 1.1E-109 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 Gene3D G3DSA:3.90.1150.10 276 393 3.1E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 PANTHER PTHR11751 19 395 1.9E-130 T 22-04-2016 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 SUPERFAMILY SSF53383 12 393 2.89E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 Gene3D G3DSA:3.40.640.10 50 275 3.5E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 PANTHER PTHR11751:SF417 19 395 1.9E-130 T 22-04-2016 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 120 141 1.4E-12 T 22-04-2016 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 98 118 1.4E-12 T 22-04-2016 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 168 192 1.4E-12 T 22-04-2016 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 204 227 1.4E-12 T 22-04-2016 LMES_RS06005 63314beabcaf63a4b843ddd88ff74911 400 Pfam PF00155 Aminotransferase class I and II 36 386 6.8E-66 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS06300 be01607f9d4bdd262e5beeb1591b7f91 254 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 38 243 4.2E-61 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 LMES_RS06300 be01607f9d4bdd262e5beeb1591b7f91 254 PANTHER PTHR32309:SF13 30 254 7.7E-60 T 22-04-2016 LMES_RS06300 be01607f9d4bdd262e5beeb1591b7f91 254 SUPERFAMILY SSF52540 58 232 1.28E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06300 be01607f9d4bdd262e5beeb1591b7f91 254 Gene3D G3DSA:3.40.50.300 58 236 2.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06300 be01607f9d4bdd262e5beeb1591b7f91 254 Pfam PF13614 AAA domain 70 204 1.2E-14 T 22-04-2016 IPR025669 AAA domain LMES_RS06300 be01607f9d4bdd262e5beeb1591b7f91 254 PANTHER PTHR32309 30 254 7.7E-60 T 22-04-2016 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 Pfam PF00155 Aminotransferase class I and II 31 346 2.2E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 355 55.387 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 3 347 1.5E-90 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 Gene3D G3DSA:3.40.640.10 41 251 6.0E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 Gene3D G3DSA:3.90.1150.10 252 347 7.7E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 SUPERFAMILY SSF53383 23 347 1.99E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 PANTHER PTHR11751 3 353 1.5E-91 T 22-04-2016 LMES_RS06890 eeb91d5e056cb7784c13f25cadbe1671 357 PANTHER PTHR11751:SF366 3 353 1.5E-91 T 22-04-2016 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 Pfam PF00005 ABC transporter 276 432 4.6E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 Pfam PF00005 ABC transporter 24 172 2.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 PANTHER PTHR24220 9 385 8.8E-187 T 22-04-2016 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 SMART SM00382 32 220 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 PANTHER PTHR24220:SF239 9 385 8.8E-187 T 22-04-2016 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 Gene3D G3DSA:3.40.50.300 4 233 5.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 Gene3D G3DSA:3.40.50.300 257 495 4.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 SUPERFAMILY SSF52540 249 490 1.64E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00355 db38bc0277108770f6f543952d8720f9 518 SUPERFAMILY SSF52540 6 230 1.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 7.5E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 58.964 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PANTHER PTHR23115 1 394 7.8E-239 T 22-04-2016 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 9.4E-218 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 SUPERFAMILY SSF52540 8 226 1.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 SUPERFAMILY SSF50447 205 300 1.85E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Gene3D G3DSA:2.40.30.10 302 393 2.5E-44 T 22-04-2016 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 5.2E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 SUPERFAMILY SSF50465 303 394 1.3E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PANTHER PTHR23115:SF112 1 394 7.8E-239 T 22-04-2016 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Gene3D G3DSA:3.40.50.300 7 211 3.4E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.4E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.4E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.4E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.4E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.4E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Gene3D G3DSA:2.40.30.10 212 299 3.1E-37 T 22-04-2016 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 7.2E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LMES_RS03010 2e575ba4d46d77415d5e27e77f06e55f 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-59 T 22-04-2016 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 PANTHER PTHR23504 1 389 7.8E-44 T 22-04-2016 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 Pfam PF07690 Major Facilitator Superfamily 17 303 1.7E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 SUPERFAMILY SSF103473 9 389 2.75E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 Gene3D G3DSA:1.20.1250.20 218 389 4.8E-18 T 22-04-2016 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 Gene3D G3DSA:1.20.1250.20 11 193 8.6E-33 T 22-04-2016 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 PRINTS PR01035 Tetracycline resistance protein signature 53 72 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 PRINTS PR01035 Tetracycline resistance protein signature 84 108 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 PRINTS PR01035 Tetracycline resistance protein signature 257 277 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05430 22a41271fdf8bd4e53b38044e6be65fe 401 PRINTS PR01035 Tetracycline resistance protein signature 141 163 4.1E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS01795 3c31d1ed5c7ce967281dea9f818597a9 217 SUPERFAMILY SSF109604 3 188 6.28E-31 T 22-04-2016 LMES_RS01795 3c31d1ed5c7ce967281dea9f818597a9 217 Pfam PF12917 HD containing hydrolase-like enzyme 1 207 6.5E-96 T 22-04-2016 IPR027366 HD containing hydrolase-like enzyme LMES_RS01795 3c31d1ed5c7ce967281dea9f818597a9 217 Gene3D G3DSA:1.10.3210.10 2 191 2.0E-29 T 22-04-2016 IPR006674 HD domain LMES_RS02535 3e9f3331999d178a45e36d1b347717ff 206 Pfam PF01121 Dephospho-CoA kinase 3 183 1.5E-56 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LMES_RS02535 3e9f3331999d178a45e36d1b347717ff 206 Gene3D G3DSA:3.40.50.300 1 199 2.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02535 3e9f3331999d178a45e36d1b347717ff 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 199 28.468 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LMES_RS02535 3e9f3331999d178a45e36d1b347717ff 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 9.9E-57 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LMES_RS02535 3e9f3331999d178a45e36d1b347717ff 206 PANTHER PTHR10695 1 198 8.7E-75 T 22-04-2016 LMES_RS02535 3e9f3331999d178a45e36d1b347717ff 206 SUPERFAMILY SSF52540 1 195 1.71E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07180 d5a88c6a6ec5e380336e00610ef055bb 425 Pfam PF02601 Exonuclease VII, large subunit 133 417 2.0E-92 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 LMES_RS07180 d5a88c6a6ec5e380336e00610ef055bb 425 PANTHER PTHR30008:SF0 1 425 1.1E-138 T 22-04-2016 LMES_RS07180 d5a88c6a6ec5e380336e00610ef055bb 425 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 10 419 3.3E-135 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07180 d5a88c6a6ec5e380336e00610ef055bb 425 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 420 26.935 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LMES_RS07180 d5a88c6a6ec5e380336e00610ef055bb 425 Pfam PF13742 OB-fold nucleic acid binding domain 9 104 6.5E-23 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 LMES_RS07180 d5a88c6a6ec5e380336e00610ef055bb 425 PANTHER PTHR30008 1 425 1.1E-138 T 22-04-2016 LMES_RS08325 1c088abe06b1d44cc0afa29a0cfa9f63 392 PANTHER PTHR33392 227 353 2.2E-75 T 22-04-2016 LMES_RS08325 1c088abe06b1d44cc0afa29a0cfa9f63 392 PANTHER PTHR33392 22 209 2.2E-75 T 22-04-2016 LMES_RS08325 1c088abe06b1d44cc0afa29a0cfa9f63 392 PANTHER PTHR33392:SF5 227 353 2.2E-75 T 22-04-2016 LMES_RS08325 1c088abe06b1d44cc0afa29a0cfa9f63 392 PANTHER PTHR33392:SF5 22 209 2.2E-75 T 22-04-2016 LMES_RS08325 1c088abe06b1d44cc0afa29a0cfa9f63 392 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 96 196 1.2E-26 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS08325 1c088abe06b1d44cc0afa29a0cfa9f63 392 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 97 269 5.7E-44 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 22-04-2016 IPR030659 SecY conserved site LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 427 3.7E-125 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PIRSF PIRSF004557 1 436 1.5E-114 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 Gene3D G3DSA:1.10.3370.10 4 435 1.3E-130 T 22-04-2016 IPR023201 SecY subunit domain LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 9.8E-85 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 431 25.786 T 22-04-2016 IPR026593 Protein translocase subunit SecY LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 Pfam PF00344 SecY translocase 68 414 6.1E-95 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PANTHER PTHR10906 1 443 1.0E-153 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 PANTHER PTHR10906:SF2 1 443 1.0E-153 T 22-04-2016 LMES_RS00995 7feb79bc57240c5eb048a8c4bc39fc25 444 SUPERFAMILY SSF103491 4 421 1.44E-113 T 22-04-2016 IPR023201 SecY subunit domain LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 60.012 T 22-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Pfam PF01709 Transcriptional regulator 4 236 1.7E-76 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 30.099 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Gene3D G3DSA:1.10.10.200 1 78 3.7E-27 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Gene3D G3DSA:3.30.70.980 133 203 1.3E-19 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 SUPERFAMILY SSF75625 1 237 1.83E-76 T 22-04-2016 IPR029072 YebC-like LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Gene3D G3DSA:3.30.1270.10 82 132 1.4E-32 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 Gene3D G3DSA:3.30.1270.10 211 237 1.4E-32 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 PANTHER PTHR12532:SF4 1 237 9.9E-133 T 22-04-2016 LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 PANTHER PTHR12532 1 237 9.9E-133 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS01950 39c3e47a317ebdd90adf6859e64807d8 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 2.4E-65 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 SMART SM00062 50 277 2.3E-55 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 Gene3D G3DSA:3.40.190.10 238 275 2.5E-28 T 22-04-2016 LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 Gene3D G3DSA:3.40.190.10 49 134 2.5E-28 T 22-04-2016 LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 275 2.3E-48 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 Gene3D G3DSA:3.40.190.10 135 237 1.3E-21 T 22-04-2016 LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 SMART SM00079 65 276 7.2E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 SUPERFAMILY SSF53850 17 275 6.92E-57 T 22-04-2016 LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 PANTHER PTHR18966:SF207 36 273 6.8E-57 T 22-04-2016 LMES_RS08735 851a68e64d711d3e9e2b2a5fbf00e55b 288 PANTHER PTHR18966 36 273 6.8E-57 T 22-04-2016 LMES_RS02800 80608979c91167f1b26b859ff4fd7c6e 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 81 1.8E-16 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LMES_RS02800 80608979c91167f1b26b859ff4fd7c6e 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LMES_RS02800 80608979c91167f1b26b859ff4fd7c6e 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 188 3.3E-54 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LMES_RS02800 80608979c91167f1b26b859ff4fd7c6e 193 PIRSF PIRSF000847 1 192 1.4E-52 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LMES_RS02800 80608979c91167f1b26b859ff4fd7c6e 193 PANTHER PTHR14269 1 183 2.9E-41 T 22-04-2016 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 Gene3D G3DSA:3.30.70.660 115 252 1.1E-43 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 254 35.329 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 PANTHER PTHR11142:SF0 1 255 1.4E-85 T 22-04-2016 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 SUPERFAMILY SSF55120 1 255 3.31E-78 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 PANTHER PTHR11142 1 255 1.4E-85 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 Pfam PF01416 tRNA pseudouridine synthase 6 112 1.2E-9 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 Pfam PF01416 tRNA pseudouridine synthase 154 255 1.3E-26 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 249 4.0E-57 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 PIRSF PIRSF001430 1 255 6.7E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01060 ed2ab030f2e7e878d34e5220eba3f3c8 255 Gene3D G3DSA:3.30.70.580 1 112 3.2E-32 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 13 330 1.6E-102 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 Gene3D G3DSA:3.20.20.140 8 334 1.8E-92 T 22-04-2016 LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 Pfam PF00962 Adenosine/AMP deaminase 13 328 6.8E-61 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 PANTHER PTHR11409 7 337 1.2E-137 T 22-04-2016 LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 PANTHER PTHR11409:SF41 7 337 1.2E-137 T 22-04-2016 LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 SUPERFAMILY SSF51556 8 334 9.18E-77 T 22-04-2016 IPR032466 Metal-dependent hydrolase LMES_RS03895 bf687245d364d8b4a959e08360347cc7 338 Hamap MF_01962 Adenine deaminase. 9 320 64.3 T 22-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 LMES_RS00605 0a246af0c29a71bf6c399304a65493b8 333 SUPERFAMILY SSF51726 12 330 1.07E-35 T 22-04-2016 LMES_RS00605 0a246af0c29a71bf6c399304a65493b8 333 Gene3D G3DSA:3.20.20.210 60 330 1.6E-24 T 22-04-2016 LMES_RS00605 0a246af0c29a71bf6c399304a65493b8 333 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 72 330 2.6E-17 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LMES_RS08565 cabd2d8f52917e311f99d53d76869a3a 171 PIRSF PIRSF031551 1 171 1.1E-55 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 LMES_RS08565 cabd2d8f52917e311f99d53d76869a3a 171 PANTHER PTHR40658 1 171 6.0E-62 T 22-04-2016 LMES_RS08565 cabd2d8f52917e311f99d53d76869a3a 171 Pfam PF08020 Protein of unknown function (DUF1706) 1 166 6.4E-57 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 LMES_RS08565 cabd2d8f52917e311f99d53d76869a3a 171 PANTHER PTHR40658:SF3 1 171 6.0E-62 T 22-04-2016 LMES_RS05675 9467c527a891170998abae5f10f92040 468 PANTHER PTHR11785:SF29 16 459 1.4E-115 T 22-04-2016 LMES_RS05675 9467c527a891170998abae5f10f92040 468 Pfam PF00324 Amino acid permease 22 444 1.2E-85 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LMES_RS05675 9467c527a891170998abae5f10f92040 468 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LMES_RS05675 9467c527a891170998abae5f10f92040 468 PANTHER PTHR11785 16 459 1.4E-115 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS05675 9467c527a891170998abae5f10f92040 468 PIRSF PIRSF006060 1 466 4.2E-57 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 21 454 5.5E-139 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 Gene3D G3DSA:1.20.1250.20 240 446 1.2E-13 T 22-04-2016 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 Gene3D G3DSA:1.20.1250.20 29 217 3.2E-19 T 22-04-2016 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 PANTHER PTHR11328:SF38 20 441 4.8E-93 T 22-04-2016 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 PANTHER PTHR11328 20 441 4.8E-93 T 22-04-2016 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 Pfam PF13347 MFS/sugar transport protein 23 442 4.6E-97 T 22-04-2016 LMES_RS04350 f6681b8ac22792bdbee498b8245bb4f0 467 SUPERFAMILY SSF103473 19 443 1.83E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 PANTHER PTHR34069 1 321 2.1E-101 T 22-04-2016 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 SUPERFAMILY SSF53901 4 321 2.31E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 Gene3D G3DSA:3.40.47.10 1 161 2.8E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 PANTHER PTHR34069:SF2 1 321 2.1E-101 T 22-04-2016 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 Gene3D G3DSA:3.40.47.10 162 321 5.0E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 322 56.554 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 322 6.6E-91 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 321 1.4E-25 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS01510 4a00bccd1d8afd59d22986712191209b 322 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 174 3.6E-26 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LMES_RS04285 88c83341021138ff7418c7e89621262a 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 188 1.3E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LMES_RS04285 88c83341021138ff7418c7e89621262a 228 Gene3D G3DSA:3.40.50.1000 2 20 2.8E-28 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04285 88c83341021138ff7418c7e89621262a 228 Gene3D G3DSA:3.40.50.1000 100 210 2.8E-28 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04285 88c83341021138ff7418c7e89621262a 228 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 194 2.7E-51 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase LMES_RS04285 88c83341021138ff7418c7e89621262a 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 189 3.6E-18 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04285 88c83341021138ff7418c7e89621262a 228 PANTHER PTHR18901 6 226 3.5E-56 T 22-04-2016 LMES_RS04285 88c83341021138ff7418c7e89621262a 228 Gene3D G3DSA:1.10.150.240 21 98 1.4E-26 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LMES_RS04285 88c83341021138ff7418c7e89621262a 228 SUPERFAMILY SSF56784 6 212 7.68E-39 T 22-04-2016 IPR023214 HAD-like domain LMES_RS04285 88c83341021138ff7418c7e89621262a 228 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 7 195 2.8E-71 T 22-04-2016 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 LMES_RS04285 88c83341021138ff7418c7e89621262a 228 PANTHER PTHR18901:SF19 6 226 3.5E-56 T 22-04-2016 LMES_RS00720 503019783cec2b072fcb634b89a90cd1 412 Pfam PF12698 ABC-2 family transporter protein 16 394 5.6E-15 T 22-04-2016 LMES_RS00720 503019783cec2b072fcb634b89a90cd1 412 PANTHER PTHR30294:SF4 39 408 3.7E-13 T 22-04-2016 LMES_RS00720 503019783cec2b072fcb634b89a90cd1 412 PANTHER PTHR30294 39 408 3.7E-13 T 22-04-2016 LMES_RS02675 a0c5b1e06c1869232f56eece0a6346f1 83 PANTHER PTHR40067 2 82 6.0E-35 T 22-04-2016 LMES_RS02675 a0c5b1e06c1869232f56eece0a6346f1 83 Hamap MF_01507 UPF0297 protein . 1 83 24.338 T 22-04-2016 IPR009309 Uncharacterised protein family UPF0297 LMES_RS02675 a0c5b1e06c1869232f56eece0a6346f1 83 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 4.6E-35 T 22-04-2016 IPR009309 Uncharacterised protein family UPF0297 LMES_RS02675 a0c5b1e06c1869232f56eece0a6346f1 83 PIRSF PIRSF037258 1 83 2.3E-39 T 22-04-2016 IPR009309 Uncharacterised protein family UPF0297 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 PANTHER PTHR11019:SF50 8 232 5.9E-16 T 22-04-2016 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 Pfam PF02311 AraC-like ligand binding domain 18 92 2.9E-7 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 SMART SM00342 170 249 3.1E-9 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 SUPERFAMILY SSF46689 154 204 7.62E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 SUPERFAMILY SSF51215 27 100 9.68E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 Pfam PF12833 Helix-turn-helix domain 176 233 1.3E-13 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 PANTHER PTHR11019 8 232 5.9E-16 T 22-04-2016 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 Gene3D G3DSA:2.60.120.280 26 103 9.8E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LMES_RS05005 45f5d0236661a71a441897a749bc3820 257 Gene3D G3DSA:1.10.10.60 152 207 1.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 Gene3D G3DSA:3.40.640.10 48 279 9.9E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 Gene3D G3DSA:3.90.1150.10 282 371 9.4E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 Gene3D G3DSA:3.90.1150.10 3 46 9.4E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 Pfam PF00202 Aminotransferase class-III 8 370 6.1E-89 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 SUPERFAMILY SSF53383 4 371 1.77E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 PANTHER PTHR11986 1 372 6.7E-129 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 PANTHER PTHR11986:SF79 1 372 6.7E-129 T 22-04-2016 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 200 237 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS00280 a5b3325e8e9d17d3f53294423bb8670b 372 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 371 37.642 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LMES_RS04935 a09e7c6bed8582a55d5b15e70a344777 154 Pfam PF01047 MarR family 43 90 2.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04935 a09e7c6bed8582a55d5b15e70a344777 154 SUPERFAMILY SSF46785 37 151 2.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04935 a09e7c6bed8582a55d5b15e70a344777 154 PANTHER PTHR35790 43 154 1.4E-12 T 22-04-2016 LMES_RS04935 a09e7c6bed8582a55d5b15e70a344777 154 PANTHER PTHR35790:SF1 43 154 1.4E-12 T 22-04-2016 LMES_RS04935 a09e7c6bed8582a55d5b15e70a344777 154 Gene3D G3DSA:1.10.10.10 15 152 6.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04935 a09e7c6bed8582a55d5b15e70a344777 154 SMART SM00347 34 138 4.2E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 SUPERFAMILY SSF63411 271 416 1.27E-7 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 Pfam PF00675 Insulinase (Peptidase family M16) 62 174 5.1E-13 T 22-04-2016 IPR011765 Peptidase M16, N-terminal LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 PANTHER PTHR11851 13 403 6.6E-89 T 22-04-2016 LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 SUPERFAMILY SSF63411 12 219 2.93E-34 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 Gene3D G3DSA:3.30.830.10 9 219 7.6E-34 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 PANTHER PTHR11851:SF134 13 403 6.6E-89 T 22-04-2016 LMES_RS02790 8d759d1debb06dee312674ef2710677b 423 Pfam PF05193 Peptidase M16 inactive domain 181 344 5.3E-10 T 22-04-2016 IPR007863 Peptidase M16, C-terminal LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 Gene3D G3DSA:3.40.50.720 3 256 1.3E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 SUPERFAMILY SSF51735 3 256 1.84E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 255 2.7E-58 T 22-04-2016 LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.4E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 TIGRFAM TIGR02415 23BDH: acetoin reductases 5 257 1.1E-107 T 22-04-2016 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PANTHER PTHR24322:SF347 9 138 3.8E-59 T 22-04-2016 LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PANTHER PTHR24322:SF347 154 186 3.8E-59 T 22-04-2016 LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PANTHER PTHR24322 9 138 3.8E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS00655 a0fdc63d5d1de00409686b86e9f95318 258 PANTHER PTHR24322 154 186 3.8E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01365 c4fd15aa8655faa6cd631a3c3a80c789 215 PIRSF PIRSF000705 1 211 2.3E-53 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 LMES_RS01365 c4fd15aa8655faa6cd631a3c3a80c789 215 SUPERFAMILY SSF52540 2 207 1.12E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01365 c4fd15aa8655faa6cd631a3c3a80c789 215 PANTHER PTHR10513:SF17 1 203 1.9E-51 T 22-04-2016 LMES_RS01365 c4fd15aa8655faa6cd631a3c3a80c789 215 Pfam PF01712 Deoxynucleoside kinase 2 206 7.9E-57 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain LMES_RS01365 c4fd15aa8655faa6cd631a3c3a80c789 215 Gene3D G3DSA:3.40.50.300 1 189 1.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01365 c4fd15aa8655faa6cd631a3c3a80c789 215 PANTHER PTHR10513 1 203 1.9E-51 T 22-04-2016 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 309 1.2E-79 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 Gene3D G3DSA:3.40.50.1980 30 190 2.3E-51 T 22-04-2016 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PANTHER PTHR30477:SF12 1 309 1.5E-113 T 22-04-2016 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 Gene3D G3DSA:3.40.50.1980 191 312 7.1E-45 T 22-04-2016 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 SUPERFAMILY SSF53807 30 312 1.08E-86 T 22-04-2016 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 224 242 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 61 79 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 140 159 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 290 308 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 80 99 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 269 287 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 198 215 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 247 264 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00691 Adhesin B signature 36 57 1.3E-80 T 22-04-2016 IPR006129 Adhesin B GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00690 Adhesin family signature 277 296 1.8E-49 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00690 Adhesin family signature 198 219 1.8E-49 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00690 Adhesin family signature 251 269 1.8E-49 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00690 Adhesin family signature 80 97 1.8E-49 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00690 Adhesin family signature 67 80 1.8E-49 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PRINTS PR00690 Adhesin family signature 36 54 1.8E-49 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS04605 5110bd7056e44a8ba073c0c53f4f3ce5 313 PANTHER PTHR30477 1 309 1.5E-113 T 22-04-2016 LMES_RS07435 700e7ab7b0b33fb038d73d20a93598ad 147 TIGRFAM TIGR01636 phage_rinA: phage transcriptional regulator, RinA family 5 121 2.0E-8 T 22-04-2016 IPR006523 Transcription activator RinA LMES_RS07435 700e7ab7b0b33fb038d73d20a93598ad 147 SUPERFAMILY SSF88659 65 127 2.75E-5 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS07435 700e7ab7b0b33fb038d73d20a93598ad 147 Pfam PF05263 Protein of unknown function (DUF722) 2 126 2.3E-52 T 22-04-2016 IPR007927 Protein of unknown function DUF722 LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 SUPERFAMILY SSF52518 8 295 4.16E-89 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 315 6.7E-104 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 SUPERFAMILY SSF52922 516 639 1.06E-24 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 Pfam PF02779 Transketolase, pyrimidine binding domain 337 503 4.3E-39 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 PANTHER PTHR11624 3 640 1.5E-256 T 22-04-2016 IPR033247 Transketolase family LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 Gene3D G3DSA:3.40.50.970 6 298 7.2E-95 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 Gene3D G3DSA:3.40.50.920 519 639 2.6E-26 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 Gene3D G3DSA:3.40.50.970 329 506 4.2E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 SUPERFAMILY SSF52518 335 503 1.18E-55 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 SMART SM00861 334 505 9.8E-53 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LMES_RS05125 ee9f1e8100b49ec0842d1433e2324d24 640 PANTHER PTHR11624:SF1 3 640 1.5E-256 T 22-04-2016 LMES_RS01520 3817b89f281ce40b5cc3206829a711b1 117 Pfam PF00877 NlpC/P60 family 25 104 1.6E-6 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS01520 3817b89f281ce40b5cc3206829a711b1 117 SUPERFAMILY SSF54001 19 111 7.85E-10 T 22-04-2016 LMES_RS01520 3817b89f281ce40b5cc3206829a711b1 117 Gene3D G3DSA:3.90.1720.10 24 110 9.2E-11 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 Gene3D G3DSA:3.40.50.1100 41 142 2.8E-29 T 22-04-2016 LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 291 1.6E-62 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 Gene3D G3DSA:3.40.50.1100 2 40 3.2E-68 T 22-04-2016 LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 Gene3D G3DSA:3.40.50.1100 148 302 3.2E-68 T 22-04-2016 LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 SUPERFAMILY SSF53686 3 300 5.63E-84 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 PANTHER PTHR10314:SF8 3 299 2.4E-105 T 22-04-2016 LMES_RS05575 7ff7f0533562359831ba9bf760eca114 304 PANTHER PTHR10314 3 299 2.4E-105 T 22-04-2016 LMES_RS08190 976b3ee0f8f8ff90c7949f4a16e8f9ae 135 Pfam PF00636 Ribonuclease III domain 13 112 5.3E-15 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS08190 976b3ee0f8f8ff90c7949f4a16e8f9ae 135 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 3 129 27.832 T 22-04-2016 IPR008226 Mini-ribonuclease 3 family LMES_RS08190 976b3ee0f8f8ff90c7949f4a16e8f9ae 135 Gene3D G3DSA:1.10.1520.10 3 131 9.3E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS08190 976b3ee0f8f8ff90c7949f4a16e8f9ae 135 PIRSF PIRSF005520 1 134 4.4E-46 T 22-04-2016 IPR008226 Mini-ribonuclease 3 family LMES_RS08190 976b3ee0f8f8ff90c7949f4a16e8f9ae 135 PANTHER PTHR34276 6 129 4.0E-45 T 22-04-2016 LMES_RS08190 976b3ee0f8f8ff90c7949f4a16e8f9ae 135 SUPERFAMILY SSF69065 5 128 4.19E-42 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 Gene3D G3DSA:1.10.10.60 316 363 4.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 SUPERFAMILY SSF46689 262 312 4.21E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 PANTHER PTHR11019:SF141 264 368 1.3E-27 T 22-04-2016 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 SMART SM00342 277 360 7.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 SUPERFAMILY SSF46689 314 364 4.39E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 Gene3D G3DSA:1.10.10.60 264 313 9.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 Pfam PF12833 Helix-turn-helix domain 283 361 3.3E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS06840 a0c388cd83b128cc205ce46969174bfc 370 PANTHER PTHR11019 264 368 1.3E-27 T 22-04-2016 LMES_RS04420 400a3ca50fa0e76d27498c20ddbd74a3 168 Pfam PF07155 ECF-type riboflavin transporter, S component 5 159 4.1E-41 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 LMES_RS04420 400a3ca50fa0e76d27498c20ddbd74a3 168 PANTHER PTHR37815:SF1 2 168 3.5E-27 T 22-04-2016 LMES_RS04420 400a3ca50fa0e76d27498c20ddbd74a3 168 PANTHER PTHR37815 2 168 3.5E-27 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 SUPERFAMILY SSF82866 121 336 3.14E-31 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 PANTHER PTHR33406:SF5 1 704 1.1E-164 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 SUPERFAMILY SSF82866 452 688 3.14E-30 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 Gene3D G3DSA:1.20.1640.10 132 341 2.1E-33 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 Gene3D G3DSA:1.20.1640.10 467 694 1.1E-35 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 PANTHER PTHR33406 1 704 1.1E-164 T 22-04-2016 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 Pfam PF03176 MMPL family 427 691 2.3E-39 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LMES_RS05020 3c96fa6e31ed8193ce436912886fe6be 704 Pfam PF03176 MMPL family 46 355 3.3E-60 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 SMART SM00354 1 67 3.4E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 Gene3D G3DSA:3.40.50.2300 163 302 5.3E-24 T 22-04-2016 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 Gene3D G3DSA:1.10.260.40 1 49 4.8E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 SUPERFAMILY SSF47413 1 55 1.08E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 SUPERFAMILY SSF53822 54 306 1.07E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 PANTHER PTHR30146 1 303 2.8E-70 T 22-04-2016 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 Pfam PF13377 Periplasmic binding protein-like domain 160 324 5.2E-22 T 22-04-2016 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 Gene3D G3DSA:3.40.50.2300 50 162 6.3E-36 T 22-04-2016 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 PANTHER PTHR30146:SF31 1 303 2.8E-70 T 22-04-2016 LMES_RS04340 57dd76f16b9ec91bf2d1aa0280e071ca 325 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 44 5.7E-12 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 276 4.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 Gene3D G3DSA:1.10.287.130 204 264 3.4E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 SMART SM00387 322 432 3.8E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 Gene3D G3DSA:3.30.565.10 265 432 2.0E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 PANTHER PTHR24423 86 114 2.2E-61 T 22-04-2016 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 PANTHER PTHR24423 208 432 2.2E-61 T 22-04-2016 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 432 1.6E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 SUPERFAMILY SSF47384 199 276 7.65E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 6.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 6.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 6.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 6.3E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 SMART SM00388 210 277 2.9E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08120 6b25b6da15536bd495405e747601dae5 432 SUPERFAMILY SSF55874 266 432 2.75E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04745 88492ab73a8e0c3e542e6669c08d1856 216 PANTHER PTHR40078:SF1 6 203 4.2E-19 T 22-04-2016 LMES_RS04745 88492ab73a8e0c3e542e6669c08d1856 216 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 197 1.5E-5 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT LMES_RS04745 88492ab73a8e0c3e542e6669c08d1856 216 PANTHER PTHR40078 6 203 4.2E-19 T 22-04-2016 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 PANTHER PTHR39080 1 57 1.1E-12 T 22-04-2016 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 3.4E-16 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 SUPERFAMILY SSF143800 3 62 4.51E-17 T 22-04-2016 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 Pfam PF00830 Ribosomal L28 family 3 59 2.0E-16 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 PANTHER PTHR39080:SF1 1 57 1.1E-12 T 22-04-2016 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 Gene3D G3DSA:2.30.170.40 2 63 3.6E-17 T 22-04-2016 LMES_RS06665 921a4102d87b1f3b6df11731b1675783 66 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 66 16.918 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00860 8061925653a239215322f7939c879a25 156 PIRSF PIRSF002122 3 156 3.6E-57 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 LMES_RS00860 8061925653a239215322f7939c879a25 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.8E-68 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LMES_RS00860 8061925653a239215322f7939c879a25 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.4E-64 T 22-04-2016 IPR023798 Ribosomal protein S7 domain LMES_RS00860 8061925653a239215322f7939c879a25 156 Gene3D G3DSA:1.10.455.10 8 156 6.5E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain LMES_RS00860 8061925653a239215322f7939c879a25 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.013 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LMES_RS00860 8061925653a239215322f7939c879a25 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 LMES_RS00860 8061925653a239215322f7939c879a25 156 PANTHER PTHR11205 1 156 8.4E-89 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 LMES_RS00860 8061925653a239215322f7939c879a25 156 SUPERFAMILY SSF47973 7 149 6.41E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain LMES_RS07795 b5572cbeb9c933d0ad4daf18b9d8d2f5 167 Pfam PF07274 Protein of unknown function (DUF1440) 17 150 8.0E-54 T 22-04-2016 IPR009898 Protein of unknown function DUF1440 LMES_RS05745 ffbcc278087bfa10018c8fed5a6cb86c 165 PIRSF PIRSF012565 2 165 8.8E-45 T 22-04-2016 IPR009370 Protein of unknown function DUF1027 LMES_RS05745 ffbcc278087bfa10018c8fed5a6cb86c 165 PANTHER PTHR41319:SF1 5 119 3.1E-27 T 22-04-2016 LMES_RS05745 ffbcc278087bfa10018c8fed5a6cb86c 165 Pfam PF06265 Protein of unknown function (DUF1027) 32 114 2.4E-31 T 22-04-2016 IPR009370 Protein of unknown function DUF1027 LMES_RS05745 ffbcc278087bfa10018c8fed5a6cb86c 165 PANTHER PTHR41319 5 119 3.1E-27 T 22-04-2016 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 PANTHER PTHR22573 19 466 1.7E-206 T 22-04-2016 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 PANTHER PTHR22573 482 563 1.7E-206 T 22-04-2016 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 9.0E-42 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Gene3D G3DSA:3.40.120.10 224 301 1.5E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Gene3D G3DSA:3.30.310.50 474 562 2.9E-23 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 136 150 6.2E-5 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 290 305 6.2E-5 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Gene3D G3DSA:3.40.120.10 302 448 2.4E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 207 306 7.5E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 SUPERFAMILY SSF53738 26 228 9.81E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 SUPERFAMILY SSF53738 298 448 3.92E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 499 548 2.3E-10 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 137 146 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 SUPERFAMILY SSF55957 438 475 7.33E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 SUPERFAMILY SSF55957 506 563 7.33E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 PANTHER PTHR22573:SF54 19 466 1.7E-206 T 22-04-2016 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 PANTHER PTHR22573:SF54 482 563 1.7E-206 T 22-04-2016 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 SUPERFAMILY SSF53738 201 306 9.81E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 318 445 1.8E-20 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS02910 7b53e4c9d25de5e3c35930b27ff13d83 566 Gene3D G3DSA:3.40.120.10 22 208 2.2E-57 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 PRINTS PR00625 DnaJ domain signature 41 61 4.2E-29 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 PRINTS PR00625 DnaJ domain signature 7 25 4.2E-29 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 PRINTS PR00625 DnaJ domain signature 25 40 4.2E-29 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 PRINTS PR00625 DnaJ domain signature 61 80 4.2E-29 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 PANTHER PTHR24078:SF190 2 294 2.5E-111 T 22-04-2016 LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 SUPERFAMILY SSF49493 111 189 2.49E-18 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 Gene3D G3DSA:1.10.287.110 2 107 4.3E-35 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 SUPERFAMILY SSF46565 2 105 1.7E-33 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 Pfam PF00226 DnaJ domain 5 66 3.2E-25 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 Pfam PF01556 DnaJ C terminal domain 118 268 3.0E-39 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 SMART SM00271 4 61 5.6E-28 T 22-04-2016 IPR001623 DnaJ domain LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 PANTHER PTHR24078 2 294 2.5E-111 T 22-04-2016 LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 Gene3D G3DSA:2.60.260.20 193 269 1.9E-21 T 22-04-2016 LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 Gene3D G3DSA:2.60.260.20 110 188 3.5E-21 T 22-04-2016 LMES_RS05850 d2d4aadc0d113da56ef076a577c014ba 299 SUPERFAMILY SSF49493 194 279 2.62E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 Gene3D G3DSA:3.90.110.10 148 300 8.5E-43 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PANTHER PTHR11540:SF3 2 298 6.5E-75 T 22-04-2016 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 299 6.9E-13 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 Gene3D G3DSA:3.40.50.720 1 146 4.9E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 3 143 8.4E-24 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PANTHER PTHR11540 2 298 6.5E-75 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 173 179 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 SUPERFAMILY SSF51735 1 145 3.95E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.6E-34 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 1.6E-34 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 1.6E-34 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.6E-34 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.6E-34 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 SUPERFAMILY SSF56327 144 300 7.93E-39 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LMES_RS00370 7d4f247b206075e5a5698752f6f790c9 304 PIRSF PIRSF000102 1 303 2.2E-81 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LMES_RS00710 2e422fc394d3871319a1a4b40887b9b8 179 SUPERFAMILY SSF51283 3 40 4.36E-31 T 22-04-2016 IPR029054 dUTPase-like LMES_RS00710 2e422fc394d3871319a1a4b40887b9b8 179 SUPERFAMILY SSF51283 71 178 4.36E-31 T 22-04-2016 IPR029054 dUTPase-like LMES_RS00710 2e422fc394d3871319a1a4b40887b9b8 179 PANTHER PTHR11241 6 41 1.8E-20 T 22-04-2016 LMES_RS00710 2e422fc394d3871319a1a4b40887b9b8 179 PANTHER PTHR11241 64 179 1.8E-20 T 22-04-2016 LMES_RS00710 2e422fc394d3871319a1a4b40887b9b8 179 Pfam PF00692 dUTPase 74 178 3.4E-7 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LMES_RS00710 2e422fc394d3871319a1a4b40887b9b8 179 Gene3D G3DSA:2.70.40.10 2 160 3.3E-36 T 22-04-2016 IPR029054 dUTPase-like LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 42.664 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 SUPERFAMILY SSF53927 10 160 1.44E-46 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 Pfam PF14437 MafB19-like deaminase 14 157 4.6E-34 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 PANTHER PTHR11079 13 166 1.1E-40 T 22-04-2016 LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 Gene3D G3DSA:3.40.140.10 8 154 1.3E-53 T 22-04-2016 LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LMES_RS01270 b0d5916d3d6428efa9dad0fb72118e88 168 PANTHER PTHR11079:SF72 13 166 1.1E-40 T 22-04-2016 LMES_RS01810 5d204f2960686a291f8af87335aba2a2 396 Pfam PF07690 Major Facilitator Superfamily 13 271 9.2E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS01810 5d204f2960686a291f8af87335aba2a2 396 PANTHER PTHR23501 11 392 2.6E-17 T 22-04-2016 LMES_RS01810 5d204f2960686a291f8af87335aba2a2 396 Gene3D G3DSA:1.20.1250.20 207 390 1.3E-14 T 22-04-2016 LMES_RS01810 5d204f2960686a291f8af87335aba2a2 396 Gene3D G3DSA:1.20.1250.20 11 185 3.4E-24 T 22-04-2016 LMES_RS01810 5d204f2960686a291f8af87335aba2a2 396 SUPERFAMILY SSF103473 7 391 5.1E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 Pfam PF01170 Putative RNA methylase family UPF0020 164 365 1.4E-52 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 SUPERFAMILY SSF53335 256 365 2.97E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 SUPERFAMILY SSF53335 147 219 2.97E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 Gene3D G3DSA:3.40.50.150 150 216 4.9E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 Gene3D G3DSA:3.40.50.150 253 375 4.9E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 Pfam PF02926 THUMP domain 36 154 1.3E-6 T 22-04-2016 IPR004114 THUMP domain GO:0003723 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 PANTHER PTHR18895 44 220 1.4E-84 T 22-04-2016 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 PANTHER PTHR18895 255 377 1.4E-84 T 22-04-2016 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 301 307 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 SMART SM00981 58 156 1.6E-5 T 22-04-2016 IPR004114 THUMP domain GO:0003723 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 PANTHER PTHR18895:SF62 44 220 1.4E-84 T 22-04-2016 LMES_RS06010 2deb93d065bf894fed0628688ed7fae6 377 PANTHER PTHR18895:SF62 255 377 1.4E-84 T 22-04-2016 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 294 322 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 PIRSF PIRSF039102 1 360 8.0E-100 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 SUPERFAMILY SSF56059 135 358 3.36E-55 T 22-04-2016 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 Gene3D G3DSA:3.30.1490.20 153 218 7.9E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 PANTHER PTHR23132:SF8 1 365 2.2E-102 T 22-04-2016 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 SUPERFAMILY SSF52440 3 134 5.66E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS01225 330730376a998360597d9db8df2b90f0 377 Gene3D G3DSA:3.40.50.20 1 124 2.1E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS01225 330730376a998360597d9db8df2b90f0 377 Gene3D G3DSA:3.30.470.20 221 367 3.2E-43 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 PANTHER PTHR23132 1 365 2.2E-102 T 22-04-2016 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 352 35.606 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 102 113 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 Pfam PF07478 D-ala D-ala ligase C-terminus 142 349 3.3E-74 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 349 1.3E-84 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS01225 330730376a998360597d9db8df2b90f0 377 Pfam PF01820 D-ala D-ala ligase N-terminus 5 125 3.2E-25 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 SMART SM00838 410 496 6.0E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Pfam PF00009 Elongation factor Tu GTP binding domain 14 193 3.8E-51 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 SUPERFAMILY SSF54980 304 382 6.47E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Pfam PF06421 GTP-binding protein LepA C-terminus 500 606 4.6E-45 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PRINTS PR00315 GTP-binding elongation factor signature 61 69 3.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PRINTS PR00315 GTP-binding elongation factor signature 86 96 3.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PRINTS PR00315 GTP-binding elongation factor signature 18 31 3.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PRINTS PR00315 GTP-binding elongation factor signature 102 113 3.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PRINTS PR00315 GTP-binding elongation factor signature 138 147 3.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Pfam PF00679 Elongation factor G C-terminus 411 497 3.7E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Gene3D G3DSA:3.30.70.870 304 381 1.0E-24 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 SUPERFAMILY SSF54980 411 506 2.78E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 SUPERFAMILY SSF52540 8 242 2.39E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 TIGRFAM TIGR01393 lepA: elongation factor 4 14 608 1.5E-295 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 184 3.7E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PANTHER PTHR23115:SF175 1 385 1.5E-271 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PANTHER PTHR23115:SF175 409 608 1.5E-271 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Pfam PF03144 Elongation factor Tu domain 2 217 287 2.5E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Gene3D G3DSA:3.30.70.240 413 502 1.5E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Hamap MF_00071 Elongation factor 4 [lepA]. 1 610 289.154 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Gene3D G3DSA:2.40.30.10 206 301 5.9E-24 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PANTHER PTHR23115 1 385 1.5E-271 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 PANTHER PTHR23115 409 608 1.5E-271 T 22-04-2016 LMES_RS05235 d485b48988f3ad9a8f6a7bade2b481cc 617 Gene3D G3DSA:3.40.50.300 9 205 1.9E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 21 36 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 Gene3D G3DSA:3.40.50.150 8 229 1.1E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 10 236 1.0E-71 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 SUPERFAMILY SSF53335 6 226 5.83E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 Pfam PF01209 ubiE/COQ5 methyltransferase family 6 236 4.0E-74 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 PANTHER PTHR10108 6 232 7.8E-70 T 22-04-2016 LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 PANTHER PTHR10108:SF928 6 232 7.8E-70 T 22-04-2016 LMES_RS09150 08b01ff3a684e0ea505396e8dd20a5c4 236 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 236 34.014 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Pfam PF01751 Toprim domain 455 566 4.9E-17 T 22-04-2016 IPR006171 Toprim domain LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 601 661 1.5E-24 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 641 657 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 230 243 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 38 48 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 410 430 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 215 230 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 256 278 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 625 637 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 506 515 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 396 410 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR01159 DNA gyrase subunit B signature 348 364 1.3E-65 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Gene3D G3DSA:3.40.50.670 440 653 7.3E-85 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 38 672 4.5E-284 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 SMART SM00433 67 665 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 SUPERFAMILY SSF55874 38 247 1.83E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 66 208 1.5E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PANTHER PTHR10169 18 672 7.6E-273 T 22-04-2016 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 ProSitePatterns PS00177 DNA topoisomerase II signature. 458 466 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 35 672 84.646 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Gene3D G3DSA:3.30.230.10 256 428 3.0E-69 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 SUPERFAMILY SSF54211 257 428 1.69E-58 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Gene3D G3DSA:3.30.565.10 38 247 9.7E-88 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 604 620 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 540 557 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 67 82 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 304 317 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 560 572 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 522 538 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 102 115 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 145 159 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 PRINTS PR00418 DNA topoisomerase II family signature 456 470 7.4E-67 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 SUPERFAMILY SSF56719 431 663 3.66E-81 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 Pfam PF00204 DNA gyrase B 257 426 1.3E-62 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 LMES_RS00025 6d6ff4d2b465c2f034896407fbcefec6 672 SMART SM00387 63 209 7.1E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS05920 7a492681e30bdc14ece526019e46e82f 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 24.105 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid LMES_RS05920 7a492681e30bdc14ece526019e46e82f 89 PANTHER PTHR19836 1 89 9.3E-50 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05920 7a492681e30bdc14ece526019e46e82f 89 SUPERFAMILY SSF57716 2 89 9.27E-30 T 22-04-2016 LMES_RS05920 7a492681e30bdc14ece526019e46e82f 89 Gene3D G3DSA:4.10.830.10 36 89 2.0E-28 T 22-04-2016 LMES_RS05920 7a492681e30bdc14ece526019e46e82f 89 PANTHER PTHR19836:SF20 1 89 9.3E-50 T 22-04-2016 LMES_RS05920 7a492681e30bdc14ece526019e46e82f 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.5E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02300 97a0f9302e211c78830c92ab75f6da02 324 PANTHER PTHR30482 1 307 2.6E-98 T 22-04-2016 LMES_RS02300 97a0f9302e211c78830c92ab75f6da02 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 290 8.7E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LMES_RS02300 97a0f9302e211c78830c92ab75f6da02 324 PANTHER PTHR30482:SF10 1 307 2.6E-98 T 22-04-2016 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 Gene3D G3DSA:3.40.192.10 2 105 1.0E-34 T 22-04-2016 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 SUPERFAMILY SSF53223 2 100 1.73E-28 T 22-04-2016 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 272 3.6E-60 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 274 30.049 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 Gene3D G3DSA:3.40.50.720 106 273 1.1E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 PANTHER PTHR21089 1 274 1.2E-71 T 22-04-2016 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 7.9E-25 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LMES_RS05120 b37c241300ae4a7de8a72e68408b5522 274 SUPERFAMILY SSF51735 101 273 1.25E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03600 34bac9b64361d3d463897c627aca4843 267 Gene3D G3DSA:3.40.1190.20 3 249 4.1E-67 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS03600 34bac9b64361d3d463897c627aca4843 267 PANTHER PTHR20858:SF19 2 250 7.3E-63 T 22-04-2016 LMES_RS03600 34bac9b64361d3d463897c627aca4843 267 PANTHER PTHR20858 2 250 7.3E-63 T 22-04-2016 LMES_RS03600 34bac9b64361d3d463897c627aca4843 267 SUPERFAMILY SSF53613 3 249 2.65E-56 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS03600 34bac9b64361d3d463897c627aca4843 267 Pfam PF08543 Phosphomethylpyrimidine kinase 12 250 1.0E-61 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 9 460 5.1E-182 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 155 349 1.3E-10 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 PANTHER PTHR11098 9 474 1.1E-200 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 SUPERFAMILY SSF54675 2 137 6.62E-48 T 22-04-2016 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 PIRSF PIRSF000484 3 474 2.6E-149 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 SUPERFAMILY SSF51690 138 472 6.18E-127 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 PANTHER PTHR11098:SF1 9 474 1.1E-200 T 22-04-2016 LMES_RS06855 1590996e44a51563844b83bc84f2cb8e 480 Gene3D G3DSA:3.20.140.10 4 381 5.8E-135 T 22-04-2016 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 PANTHER PTHR11609 4 356 8.7E-127 T 22-04-2016 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 SUPERFAMILY SSF51246 303 363 1.96E-14 T 22-04-2016 IPR011054 Rudiment single hybrid motif LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 Gene3D G3DSA:3.30.470.20 142 354 2.0E-78 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 SUPERFAMILY SSF56059 105 299 6.36E-55 T 22-04-2016 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 Pfam PF02222 ATP-grasp domain 116 278 8.7E-49 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 10 354 40.557 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 PANTHER PTHR11609:SF5 4 356 8.7E-127 T 22-04-2016 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 SUPERFAMILY SSF52440 8 91 2.45E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 353 2.5E-111 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LMES_RS03455 cbde430ffbccc73f4b6a195b6de2e8ad 369 Gene3D G3DSA:3.40.50.20 2 113 1.8E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 PANTHER PTHR11113 3 378 7.5E-131 T 22-04-2016 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 Gene3D G3DSA:2.30.40.10 29 62 4.6E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 SUPERFAMILY SSF51556 57 345 5.05E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 PANTHER PTHR11113:SF7 3 378 7.5E-131 T 22-04-2016 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 Pfam PF01979 Amidohydrolase family 53 365 3.2E-17 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 Gene3D G3DSA:3.20.20.140 63 332 2.0E-91 T 22-04-2016 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 PIRSF PIRSF038994 1 378 1.1E-111 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 SUPERFAMILY SSF51338 347 376 5.25E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 SUPERFAMILY SSF51338 2 56 5.25E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 Gene3D G3DSA:2.30.40.10 333 363 1.2E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LMES_RS02020 2da5a9f573b784604f53108fea17bd9c 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 369 3.4E-90 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 LMES_RS01745 ddfff8ba2b1f7209857657caf7270fe2 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 228 5.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01745 ddfff8ba2b1f7209857657caf7270fe2 234 PANTHER PTHR30614:SF16 1 233 2.0E-59 T 22-04-2016 LMES_RS01745 ddfff8ba2b1f7209857657caf7270fe2 234 Gene3D G3DSA:1.10.3720.10 15 229 3.4E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01745 ddfff8ba2b1f7209857657caf7270fe2 234 PANTHER PTHR30614 1 233 2.0E-59 T 22-04-2016 LMES_RS01745 ddfff8ba2b1f7209857657caf7270fe2 234 SUPERFAMILY SSF161098 15 213 2.75E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08470 412540a6adc3074aa635cfb228b139f4 307 Gene3D G3DSA:1.20.1510.10 8 215 4.1E-6 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain LMES_RS08470 412540a6adc3074aa635cfb228b139f4 307 SUPERFAMILY SSF161111 5 219 4.32E-14 T 22-04-2016 LMES_RS08470 412540a6adc3074aa635cfb228b139f4 307 Pfam PF01545 Cation efflux family 11 217 2.1E-28 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 PANTHER PTHR24031 1 343 4.3E-90 T 22-04-2016 LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 Pfam PF00270 DEAD/DEAH box helicase 17 177 1.4E-36 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 SUPERFAMILY SSF52540 61 342 4.23E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 SMART SM00490 242 324 1.4E-18 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 Gene3D G3DSA:3.40.50.300 200 349 1.0E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 Gene3D G3DSA:3.40.50.300 3 198 1.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 Pfam PF00271 Helicase conserved C-terminal domain 221 324 4.8E-19 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS02520 b14d12eede0855f72e7c635aca468587 431 SMART SM00487 12 208 7.8E-42 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 PANTHER PTHR11544 1 65 3.9E-38 T 22-04-2016 LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 Gene3D G3DSA:2.40.50.140 1 64 4.6E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 SUPERFAMILY SSF50249 1 64 5.14E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.7E-29 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 SMART SM00357 3 66 3.3E-27 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 PIRSF PIRSF002599 1 66 4.9E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 22-04-2016 IPR019844 Cold-shock conserved site LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 PRINTS PR00050 Cold shock protein signature 39 57 4.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 PRINTS PR00050 Cold shock protein signature 24 33 4.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS08440 ccec9c40c01aff6aa01ed68add0a294a 66 PRINTS PR00050 Cold shock protein signature 4 19 4.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 Pfam PF00572 Ribosomal protein L13 15 139 3.0E-52 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 PANTHER PTHR11545 1 145 3.2E-68 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 142 26.26 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 Gene3D G3DSA:3.90.1180.10 4 142 1.3E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 143 3.6E-58 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 SUPERFAMILY SSF52161 6 144 4.45E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 LMES_RS01070 d6002da30add47fe95e6607f1d58638c 147 PIRSF PIRSF002181 1 146 1.8E-47 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LMES_RS04370 c67fe3e3a83a906c0b5be13d3deaff4e 448 Gene3D G3DSA:3.90.550.10 55 305 1.4E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04370 c67fe3e3a83a906c0b5be13d3deaff4e 448 Pfam PF00535 Glycosyl transferase family 2 58 235 1.7E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS04370 c67fe3e3a83a906c0b5be13d3deaff4e 448 SUPERFAMILY SSF53448 44 341 1.69E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04370 c67fe3e3a83a906c0b5be13d3deaff4e 448 TIGRFAM TIGR03111 glyc2_xrt_Gpos1: putative glycosyltransferase, exosortase G-associated 8 442 4.0E-181 T 22-04-2016 IPR017542 Putative glycosyltransferase, exosortase G-associated LMES_RS04370 c67fe3e3a83a906c0b5be13d3deaff4e 448 PANTHER PTHR10859:SF50 38 413 2.8E-35 T 22-04-2016 LMES_RS04370 c67fe3e3a83a906c0b5be13d3deaff4e 448 PANTHER PTHR10859 38 413 2.8E-35 T 22-04-2016 LMES_RS08910 91b1e38370c18d0a42457d4f05cf80b1 98 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 96 9.6E-24 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS08910 91b1e38370c18d0a42457d4f05cf80b1 98 Pfam PF01250 Ribosomal protein S6 5 94 3.8E-26 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS08910 91b1e38370c18d0a42457d4f05cf80b1 98 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 97 20.65 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS08910 91b1e38370c18d0a42457d4f05cf80b1 98 PANTHER PTHR21011 5 96 1.2E-24 T 22-04-2016 LMES_RS08910 91b1e38370c18d0a42457d4f05cf80b1 98 SUPERFAMILY SSF54995 4 96 1.14E-30 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LMES_RS08910 91b1e38370c18d0a42457d4f05cf80b1 98 Gene3D G3DSA:3.30.70.60 4 97 7.1E-32 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LMES_RS03135 ebccdf8a2a66562fdf33a4c042ed7d3c 188 PANTHER PTHR38440 1 180 2.6E-40 T 22-04-2016 LMES_RS03135 ebccdf8a2a66562fdf33a4c042ed7d3c 188 Gene3D G3DSA:3.40.50.450 1 178 1.9E-66 T 22-04-2016 LMES_RS03135 ebccdf8a2a66562fdf33a4c042ed7d3c 188 PIRSF PIRSF021290 1 178 2.6E-62 T 22-04-2016 IPR010697 Protein of unknown function DUF1273 LMES_RS03135 ebccdf8a2a66562fdf33a4c042ed7d3c 188 Pfam PF06908 Protein of unknown function (DUF1273) 3 170 7.0E-69 T 22-04-2016 IPR010697 Protein of unknown function DUF1273 LMES_RS03135 ebccdf8a2a66562fdf33a4c042ed7d3c 188 Hamap MF_01575 UPF0398 protein . 1 176 32.938 T 22-04-2016 IPR010697 Protein of unknown function DUF1273 LMES_RS03135 ebccdf8a2a66562fdf33a4c042ed7d3c 188 SUPERFAMILY SSF102405 1 176 1.83E-62 T 22-04-2016 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 282 2.4E-33 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 PANTHER PTHR22981:SF65 3 283 5.5E-116 T 22-04-2016 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 PANTHER PTHR22981 3 283 5.5E-116 T 22-04-2016 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 Gene3D G3DSA:1.10.1040.10 163 284 1.6E-39 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 SUPERFAMILY SSF48179 163 284 1.47E-35 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 158 3.6E-47 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 Gene3D G3DSA:3.40.50.720 1 161 1.0E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 SUPERFAMILY SSF51735 1 162 2.27E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09395 0445d611d1a525cf5b9341333ace9421 287 PIRSF PIRSF000103 1 286 3.7E-71 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 SUPERFAMILY SSF55874 284 446 7.47E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 SUPERFAMILY SSF47384 215 294 3.34E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 Gene3D G3DSA:3.30.565.10 281 446 3.9E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 PANTHER PTHR24423 113 446 4.1E-79 T 22-04-2016 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 294 6.3E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 Gene3D G3DSA:1.10.287.130 220 280 2.3E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 SMART SM00388 228 295 1.1E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 SMART SM00387 335 446 1.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 Gene3D G3DSA:3.30.450.20 109 155 1.7E-5 T 22-04-2016 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 SUPERFAMILY SSF55785 112 220 3.66E-5 T 22-04-2016 IPR000014 PAS domain LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 446 1.6E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 3.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 3.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS02820 93e8f2152d311a30d7258b83f66d1239 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 445 3.4E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS04490 f15e47d48a6cc058a219ba397a272f93 119 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 101 8.8E-31 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04490 f15e47d48a6cc058a219ba397a272f93 119 PANTHER PTHR34382 1 109 5.9E-31 T 22-04-2016 LMES_RS04490 f15e47d48a6cc058a219ba397a272f93 119 PIRSF PIRSF000699 1 108 2.5E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04490 f15e47d48a6cc058a219ba397a272f93 119 PANTHER PTHR34382:SF2 1 109 5.9E-31 T 22-04-2016 LMES_RS04490 f15e47d48a6cc058a219ba397a272f93 119 Gene3D G3DSA:1.20.58.80 2 104 1.5E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04490 f15e47d48a6cc058a219ba397a272f93 119 SUPERFAMILY SSF46973 1 101 6.67E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS03330 1dbd1d54a61b5f1b799bf53fef86b428 371 SUPERFAMILY SSF53822 43 316 2.59E-13 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS03330 1dbd1d54a61b5f1b799bf53fef86b428 371 Pfam PF02608 Basic membrane protein 42 360 1.1E-63 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 LMES_RS03330 1dbd1d54a61b5f1b799bf53fef86b428 371 PANTHER PTHR34296:SF2 14 370 1.2E-86 T 22-04-2016 LMES_RS03330 1dbd1d54a61b5f1b799bf53fef86b428 371 Gene3D G3DSA:3.40.50.2300 36 177 1.2E-37 T 22-04-2016 LMES_RS03330 1dbd1d54a61b5f1b799bf53fef86b428 371 PANTHER PTHR34296 14 370 1.2E-86 T 22-04-2016 LMES_RS03330 1dbd1d54a61b5f1b799bf53fef86b428 371 Gene3D G3DSA:3.40.50.2300 178 249 5.5E-7 T 22-04-2016 LMES_RS05435 fea07c240944169efb7057472fe11c22 399 Gene3D G3DSA:3.90.1150.10 259 390 1.1E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS05435 fea07c240944169efb7057472fe11c22 399 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LMES_RS05435 fea07c240944169efb7057472fe11c22 399 SUPERFAMILY SSF53383 13 391 8.91E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS05435 fea07c240944169efb7057472fe11c22 399 PANTHER PTHR11751:SF417 18 391 1.3E-139 T 22-04-2016 LMES_RS05435 fea07c240944169efb7057472fe11c22 399 Pfam PF00155 Aminotransferase class I and II 36 385 5.1E-63 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS05435 fea07c240944169efb7057472fe11c22 399 PANTHER PTHR11751 18 391 1.3E-139 T 22-04-2016 LMES_RS05435 fea07c240944169efb7057472fe11c22 399 Gene3D G3DSA:3.40.640.10 53 258 1.8E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS07150 0d8c93f636f6739a25ec342de8ac708e 435 Pfam PF00860 Permease family 20 394 3.9E-43 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS07150 0d8c93f636f6739a25ec342de8ac708e 435 PANTHER PTHR11119:SF9 2 434 1.5E-147 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LMES_RS07150 0d8c93f636f6739a25ec342de8ac708e 435 PANTHER PTHR11119 2 434 1.5E-147 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS07150 0d8c93f636f6739a25ec342de8ac708e 435 PIRSF PIRSF005353 1 435 4.1E-161 T 22-04-2016 IPR026033 Purine permease PbuG-like LMES_RS01515 49f4c592540620c987f08c176d997e59 431 SUPERFAMILY SSF54106 88 131 8.89E-9 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Gene3D G3DSA:1.10.238.10 165 287 2.9E-6 T 22-04-2016 IPR011992 EF-hand domain pair LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Gene3D G3DSA:3.40.33.10 323 417 3.2E-5 T 22-04-2016 IPR014044 CAP domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 SUPERFAMILY SSF55797 325 423 2.62E-12 T 22-04-2016 IPR014044 CAP domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Pfam PF00188 Cysteine-rich secretory protein family 330 424 2.8E-9 T 22-04-2016 IPR014044 CAP domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 SUPERFAMILY SSF54106 30 73 1.29E-7 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Pfam PF01476 LysM domain 32 73 7.9E-10 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Pfam PF01476 LysM domain 89 131 2.8E-9 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 ProSitePatterns PS00018 EF-hand calcium-binding domain. 168 180 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site LMES_RS01515 49f4c592540620c987f08c176d997e59 431 ProSitePatterns PS00018 EF-hand calcium-binding domain. 272 284 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site LMES_RS01515 49f4c592540620c987f08c176d997e59 431 ProSitePatterns PS00018 EF-hand calcium-binding domain. 215 227 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site LMES_RS01515 49f4c592540620c987f08c176d997e59 431 SMART SM00257 88 132 4.3E-12 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 SMART SM00257 30 74 6.9E-12 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Gene3D G3DSA:3.10.350.10 87 132 1.5E-13 T 22-04-2016 IPR018392 LysM domain LMES_RS01515 49f4c592540620c987f08c176d997e59 431 Gene3D G3DSA:3.10.350.10 32 73 2.7E-12 T 22-04-2016 IPR018392 LysM domain LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 SUPERFAMILY SSF53178 2 182 6.15E-62 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 PANTHER PTHR17224 2 175 7.7E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 187 2.4E-60 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 Pfam PF01195 Peptidyl-tRNA hydrolase 4 176 1.7E-55 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 179 34.543 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 Gene3D G3DSA:3.40.50.1470 2 187 2.2E-67 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LMES_RS01885 851cb3048931ed04aad36e956f4c7722 188 PANTHER PTHR17224:SF1 2 175 7.7E-71 T 22-04-2016 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 SUPERFAMILY SSF143034 2 62 7.72E-19 T 22-04-2016 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.571 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 Pfam PF01632 Ribosomal protein L35 2 62 6.1E-19 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.1E-19 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.8E-11 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LMES_RS06340 63d3eb87cb2bcfebeccfd7910cd7e403 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.8E-11 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LMES_RS08430 3d5b86edcb2478e1426b267a91a7cc7b 423 PANTHER PTHR11119:SF49 1 417 5.8E-144 T 22-04-2016 LMES_RS08430 3d5b86edcb2478e1426b267a91a7cc7b 423 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 414 3.5E-114 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LMES_RS08430 3d5b86edcb2478e1426b267a91a7cc7b 423 PANTHER PTHR11119 1 417 5.8E-144 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS08430 3d5b86edcb2478e1426b267a91a7cc7b 423 Pfam PF00860 Permease family 21 389 1.2E-91 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 Pfam PF00230 Major intrinsic protein 2 227 1.2E-43 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PANTHER PTHR19139 1 249 2.9E-59 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PANTHER PTHR19139:SF103 1 249 2.9E-59 T 22-04-2016 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.7E-46 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PRINTS PR00783 Major intrinsic protein family signature 144 162 3.7E-46 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PRINTS PR00783 Major intrinsic protein family signature 39 63 3.7E-46 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PRINTS PR00783 Major intrinsic protein family signature 172 194 3.7E-46 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PRINTS PR00783 Major intrinsic protein family signature 76 95 3.7E-46 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 PRINTS PR00783 Major intrinsic protein family signature 211 231 3.7E-46 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 SUPERFAMILY SSF81338 1 231 8.11E-57 T 22-04-2016 IPR023271 Aquaporin-like LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 Gene3D G3DSA:1.20.1080.10 1 237 2.2E-59 T 22-04-2016 IPR023271 Aquaporin-like LMES_RS00230 d3f53800bddaa320c4d253cc688e5ec0 250 ProSitePatterns PS00221 MIP family signature. 57 65 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 SMART SM00382 415 585 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 SMART SM00382 84 227 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Pfam PF02151 UvrB/uvrC motif 301 333 3.0E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 PANTHER PTHR11638 11 653 0.0 T 22-04-2016 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 584 654 3.0E-18 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 PANTHER PTHR11638:SF117 11 653 0.0 T 22-04-2016 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Gene3D G3DSA:3.40.50.300 370 594 1.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 179 191 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 SUPERFAMILY SSF52540 46 336 1.19E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Gene3D G3DSA:3.40.50.300 47 226 4.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Gene3D G3DSA:1.10.8.60 228 304 7.0E-30 T 22-04-2016 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 449 467 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 89 217 1.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 7.0E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 526 540 7.0E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 419 437 7.0E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 464 482 7.0E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 SUPERFAMILY SSF52540 364 654 2.04E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Gene3D G3DSA:1.10.8.60 595 672 7.5E-22 T 22-04-2016 LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 SMART SM01086 584 671 6.6E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS02745 847daff9c4d55a77deed5d0544f7bece 684 Pfam PF07724 AAA domain (Cdc48 subfamily) 414 578 1.8E-50 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS02765 392cff8a1b74f9055dab20f778fbf5fb 213 Gene3D G3DSA:1.10.3720.10 9 209 1.4E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02765 392cff8a1b74f9055dab20f778fbf5fb 213 PANTHER PTHR30614:SF11 1 213 4.4E-81 T 22-04-2016 LMES_RS02765 392cff8a1b74f9055dab20f778fbf5fb 213 SUPERFAMILY SSF161098 10 198 1.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02765 392cff8a1b74f9055dab20f778fbf5fb 213 PANTHER PTHR30614 1 213 4.4E-81 T 22-04-2016 LMES_RS02765 392cff8a1b74f9055dab20f778fbf5fb 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 204 4.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02765 392cff8a1b74f9055dab20f778fbf5fb 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 2.6E-27 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS03870 2ee265ad1557774f86ea29dbe6080de3 228 SUPERFAMILY SSF52540 3 210 1.74E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03870 2ee265ad1557774f86ea29dbe6080de3 228 Pfam PF00005 ABC transporter 22 163 4.1E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS03870 2ee265ad1557774f86ea29dbe6080de3 228 SMART SM00382 30 212 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03870 2ee265ad1557774f86ea29dbe6080de3 228 PANTHER PTHR24220 7 210 4.4E-34 T 22-04-2016 LMES_RS03870 2ee265ad1557774f86ea29dbe6080de3 228 PANTHER PTHR24220:SF309 7 210 4.4E-34 T 22-04-2016 LMES_RS03870 2ee265ad1557774f86ea29dbe6080de3 228 Gene3D G3DSA:3.40.50.300 4 209 4.8E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 Gene3D G3DSA:3.30.460.10 2 143 2.4E-36 T 22-04-2016 LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 Pfam PF04607 Region found in RelA / SpoT proteins 42 160 6.1E-35 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 SMART SM00954 42 163 2.2E-40 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 PANTHER PTHR21262:SF11 2 188 7.3E-83 T 22-04-2016 LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 Gene3D G3DSA:1.10.287.860 146 188 1.3E-13 T 22-04-2016 LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 PANTHER PTHR21262 2 188 7.3E-83 T 22-04-2016 LMES_RS03255 f2bed4694a7276cfd8c08b0efe6336ee 191 SUPERFAMILY SSF81301 1 188 6.21E-53 T 22-04-2016 LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 PANTHER PTHR11061 5 464 2.8E-140 T 22-04-2016 LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 SUPERFAMILY SSF53335 80 461 8.37E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 SUPERFAMILY SSF50249 8 70 2.4E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 100 460 7.7E-22 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 Gene3D G3DSA:3.40.50.150 256 460 4.7E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 Gene3D G3DSA:2.40.50.140 7 83 6.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 28 454 7.4E-130 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 Pfam PF01938 TRAM domain 17 69 6.1E-7 T 22-04-2016 IPR002792 TRAM domain LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 391 422 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 444 454 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LMES_RS07045 376be4d165e913fe284c9a9f5c32117f 464 PANTHER PTHR11061:SF30 5 464 2.8E-140 T 22-04-2016 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 PANTHER PTHR11808:SF50 5 379 7.9E-177 T 22-04-2016 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 PANTHER PTHR11808 5 379 7.9E-177 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 Gene3D G3DSA:3.90.1150.10 244 377 5.0E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 Gene3D G3DSA:3.40.640.10 5 243 8.9E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 7.4E-142 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 PIRSF PIRSF001434 1 379 9.1E-138 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08095 92182d21640cee284ccd205a14f50622 379 SUPERFAMILY SSF53383 16 376 1.53E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS08730 385515ae7d885bdf7b5f88dce1045de5 213 PANTHER PTHR30614:SF7 1 209 2.7E-81 T 22-04-2016 LMES_RS08730 385515ae7d885bdf7b5f88dce1045de5 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 104 5.8E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS08730 385515ae7d885bdf7b5f88dce1045de5 213 SUPERFAMILY SSF161098 9 195 6.28E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08730 385515ae7d885bdf7b5f88dce1045de5 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 210 2.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08730 385515ae7d885bdf7b5f88dce1045de5 213 Gene3D G3DSA:1.10.3720.10 6 210 4.5E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08730 385515ae7d885bdf7b5f88dce1045de5 213 PANTHER PTHR30614 1 209 2.7E-81 T 22-04-2016 LMES_RS00465 d5b92e785ee27585e57482b6d753b002 334 Pfam PF00535 Glycosyl transferase family 2 13 177 7.7E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS00465 d5b92e785ee27585e57482b6d753b002 334 PANTHER PTHR10859:SF86 1 320 3.2E-96 T 22-04-2016 LMES_RS00465 d5b92e785ee27585e57482b6d753b002 334 SUPERFAMILY SSF53448 6 235 3.09E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS00465 d5b92e785ee27585e57482b6d753b002 334 PANTHER PTHR10859 1 320 3.2E-96 T 22-04-2016 LMES_RS00465 d5b92e785ee27585e57482b6d753b002 334 Gene3D G3DSA:3.90.550.10 7 135 1.8E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS05895 32f095eabf850584ca90789fca25e562 834 SUPERFAMILY SSF50447 507 590 5.89E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS05895 32f095eabf850584ca90789fca25e562 834 PANTHER PTHR23115:SF184 312 654 2.6E-198 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 PANTHER PTHR23115:SF184 687 831 2.6E-198 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 259 307 5.3E-12 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal LMES_RS05895 32f095eabf850584ca90789fca25e562 834 SUPERFAMILY SSF52156 618 742 6.67E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 337 494 1.5E-34 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 PANTHER PTHR23115 312 654 2.6E-198 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 PANTHER PTHR23115 687 831 2.6E-198 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 SUPERFAMILY SSF52540 325 508 2.46E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Gene3D G3DSA:2.40.30.10 736 833 3.9E-32 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Gene3D G3DSA:3.40.50.10050 636 713 1.3E-25 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 SUPERFAMILY SSF50447 736 833 2.5E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Pfam PF00009 Elongation factor Tu GTP binding domain 340 496 7.7E-34 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 253 832 4.6E-247 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Pfam PF11987 Translation-initiation factor 2 621 725 3.6E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 833 16.487 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Gene3D G3DSA:2.40.30.10 506 597 3.1E-23 T 22-04-2016 LMES_RS05895 32f095eabf850584ca90789fca25e562 834 Gene3D G3DSA:3.40.50.300 333 495 3.7E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 PIRSF PIRSF001235 2 399 8.0E-106 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 PANTHER PTHR32494:SF5 2 398 1.5E-107 T 22-04-2016 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 Pfam PF07687 Peptidase dimerisation domain 213 300 1.2E-4 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 Gene3D G3DSA:3.30.70.360 221 300 1.2E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 Gene3D G3DSA:3.40.630.10 3 220 1.6E-75 T 22-04-2016 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 Gene3D G3DSA:3.40.630.10 339 397 1.6E-75 T 22-04-2016 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 6 396 1.6E-94 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 SUPERFAMILY SSF55031 208 302 1.48E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 SUPERFAMILY SSF53187 324 397 4.86E-64 T 22-04-2016 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 SUPERFAMILY SSF53187 2 218 4.86E-64 T 22-04-2016 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 Pfam PF01546 Peptidase family M20/M25/M40 74 394 3.8E-22 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS05050 5454e80f7ed72e24a746f141679865e3 399 PANTHER PTHR32494 2 398 1.5E-107 T 22-04-2016 LMES_RS00905 d7fd5954cfa1fd687298e8a3575e53db 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 5.0E-80 T 22-04-2016 IPR013005 50S ribosomal protein uL4 LMES_RS00905 d7fd5954cfa1fd687298e8a3575e53db 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 203 5.3E-69 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 LMES_RS00905 d7fd5954cfa1fd687298e8a3575e53db 207 Gene3D G3DSA:3.40.1370.10 58 204 1.2E-61 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LMES_RS00905 d7fd5954cfa1fd687298e8a3575e53db 207 PANTHER PTHR10746 1 203 5.8E-86 T 22-04-2016 IPR013005 50S ribosomal protein uL4 LMES_RS00905 d7fd5954cfa1fd687298e8a3575e53db 207 SUPERFAMILY SSF52166 1 204 1.7E-77 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LMES_RS00905 d7fd5954cfa1fd687298e8a3575e53db 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 35.537 T 22-04-2016 IPR013005 50S ribosomal protein uL4 LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 PANTHER PTHR33238 68 157 1.0E-16 T 22-04-2016 LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 Pfam PF04023 FeoA domain 85 153 4.4E-14 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 Pfam PF04023 FeoA domain 4 73 2.3E-9 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 SUPERFAMILY SSF50037 87 155 7.02E-18 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 SUPERFAMILY SSF50037 4 74 9.84E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 SMART SM00899 2 74 6.6E-5 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 LMES_RS01325 c07e9339aaa4790f9e8385fd3fbb4847 157 SMART SM00899 84 156 7.7E-21 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 6.3E-5 T 22-04-2016 IPR001451 Hexapeptide repeat LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 Gene3D G3DSA:2.160.10.10 257 436 4.5E-43 T 22-04-2016 LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 PANTHER PTHR22572:SF115 5 449 7.3E-201 T 22-04-2016 LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 450 8.1E-170 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 SUPERFAMILY SSF53448 4 252 1.22E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 39.342 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 Pfam PF12804 MobA-like NTP transferase domain 6 154 5.3E-20 T 22-04-2016 IPR025877 MobA-like NTP transferase LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 SUPERFAMILY SSF51161 255 436 4.54E-43 T 22-04-2016 IPR011004 Trimeric LpxA-like LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 PANTHER PTHR22572 5 449 7.3E-201 T 22-04-2016 LMES_RS07195 28c936a4bff676a1856858ded5ce85de 457 Gene3D G3DSA:3.90.550.10 1 251 8.0E-73 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 SUPERFAMILY SSF141986 169 316 2.75E-28 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 PANTHER PTHR30237:SF5 3 322 3.7E-92 T 22-04-2016 LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 Gene3D G3DSA:3.50.30.60 188 316 7.2E-25 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 PANTHER PTHR30237 3 322 3.7E-92 T 22-04-2016 LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 Gene3D G3DSA:3.40.50.10740 1 167 2.5E-47 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 Pfam PF02016 LD-carboxypeptidase 15 311 1.4E-63 T 22-04-2016 IPR003507 Peptidase family S66 LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 SUPERFAMILY SSF52317 2 165 1.14E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04465 1e90d7a530defe1294d084d324e04baf 326 PIRSF PIRSF028757 3 324 6.4E-70 T 22-04-2016 IPR003507 Peptidase family S66 LMES_RS06095 b1038db41de56278873ed5389adae52e 300 PANTHER PTHR22916 5 263 5.6E-35 T 22-04-2016 LMES_RS06095 b1038db41de56278873ed5389adae52e 300 SUPERFAMILY SSF53448 5 287 1.22E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06095 b1038db41de56278873ed5389adae52e 300 Gene3D G3DSA:3.90.550.10 5 244 9.9E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06095 b1038db41de56278873ed5389adae52e 300 Pfam PF00535 Glycosyl transferase family 2 6 172 1.2E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 SUPERFAMILY SSF55120 72 300 1.17E-78 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 Pfam PF00849 RNA pseudouridylate synthase 87 239 2.2E-37 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 SMART SM00363 14 78 3.3E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 132 146 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 PANTHER PTHR11079 15 311 2.3E-123 T 22-04-2016 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 300 1.3E-96 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 PANTHER PTHR11079:SF73 15 311 2.3E-123 T 22-04-2016 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 Gene3D G3DSA:3.10.290.10 15 101 5.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 SUPERFAMILY SSF55174 15 100 2.35E-9 T 22-04-2016 LMES_RS05985 2aff5cf5f85b28ea0a428791308e55b5 312 Pfam PF01479 S4 domain 15 60 1.8E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 PANTHER PTHR21403:SF3 1 205 3.4E-65 T 22-04-2016 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 SUPERFAMILY SSF53850 3 198 1.81E-50 T 22-04-2016 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 PANTHER PTHR21403 1 205 3.4E-65 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 44.342 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 Gene3D G3DSA:3.40.190.10 4 105 6.8E-29 T 22-04-2016 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 Pfam PF01634 ATP phosphoribosyltransferase 48 185 2.4E-39 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 Gene3D G3DSA:3.40.190.10 106 170 6.1E-28 T 22-04-2016 LMES_RS06930 8ace315b94def640ba0d7d24e8a462e6 207 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 178 1.4E-52 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LMES_RS08675 beebe37e7ffa353ec3d11d1533d22ea5 481 Gene3D G3DSA:3.40.50.2000 303 452 7.3E-12 T 22-04-2016 LMES_RS08675 beebe37e7ffa353ec3d11d1533d22ea5 481 Pfam PF00534 Glycosyl transferases group 1 300 431 9.6E-22 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS08675 beebe37e7ffa353ec3d11d1533d22ea5 481 SUPERFAMILY SSF53756 205 477 3.77E-38 T 22-04-2016 LMES_RS08675 beebe37e7ffa353ec3d11d1533d22ea5 481 PANTHER PTHR12526 237 476 3.1E-23 T 22-04-2016 LMES_RS08675 beebe37e7ffa353ec3d11d1533d22ea5 481 Hamap MF_01472 Glycosyltransferase Gtf1 [gtf1]. 1 480 26.976 T 22-04-2016 IPR014267 Glycosyltransferase Gtf1 GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- LMES_RS02340 9cdaf2dccb6ecf825409de9393eeb4c9 603 Pfam PF08439 Oligopeptidase F 114 178 1.1E-12 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain LMES_RS02340 9cdaf2dccb6ecf825409de9393eeb4c9 603 PANTHER PTHR11804:SF46 171 599 5.3E-129 T 22-04-2016 LMES_RS02340 9cdaf2dccb6ecf825409de9393eeb4c9 603 Pfam PF01432 Peptidase family M3 340 568 5.4E-16 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LMES_RS02340 9cdaf2dccb6ecf825409de9393eeb4c9 603 SUPERFAMILY SSF55486 59 598 1.41E-90 T 22-04-2016 LMES_RS02340 9cdaf2dccb6ecf825409de9393eeb4c9 603 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 6 597 1.2E-185 T 22-04-2016 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 LMES_RS02340 9cdaf2dccb6ecf825409de9393eeb4c9 603 PANTHER PTHR11804 171 599 5.3E-129 T 22-04-2016 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 Gene3D G3DSA:2.160.10.10 54 164 1.3E-31 T 22-04-2016 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 SUPERFAMILY SSF51161 2 161 1.39E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 2 158 8.0E-64 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 PIRSF PIRSF000441 1 166 1.2E-67 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 PANTHER PTHR23416 1 166 2.6E-70 T 22-04-2016 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 119 147 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 143 4.2E-9 T 22-04-2016 IPR001451 Hexapeptide repeat LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 Gene3D G3DSA:1.10.3130.10 2 53 1.8E-17 T 22-04-2016 LMES_RS04045 d3b0156581cf7f07b340d36ce98dac90 167 PANTHER PTHR23416:SF55 1 166 2.6E-70 T 22-04-2016 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 63 3.3E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PANTHER PTHR21342:SF1 1 158 2.0E-62 T 22-04-2016 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PANTHER PTHR21342 1 158 2.0E-62 T 22-04-2016 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 Pfam PF01467 Cytidylyltransferase-like 5 132 5.1E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 4.5E-41 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 4.5E-41 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 4.5E-41 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 4.5E-41 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 4.5E-41 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 31.605 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 1.0E-55 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 Gene3D G3DSA:3.40.50.620 1 157 1.4E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS07115 e105f432c1791cecdc9d517ea86b2547 162 SUPERFAMILY SSF52374 1 156 1.18E-37 T 22-04-2016 LMES_RS00285 97b22c88552746319e44832bde517523 244 PANTHER PTHR23342 4 238 6.6E-66 T 22-04-2016 LMES_RS00285 97b22c88552746319e44832bde517523 244 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 244 24.019 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00285 97b22c88552746319e44832bde517523 244 PIRSF PIRSF000728 1 242 8.0E-73 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00285 97b22c88552746319e44832bde517523 244 Gene3D G3DSA:3.40.1160.10 2 235 1.6E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS00285 97b22c88552746319e44832bde517523 244 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 231 5.1E-77 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS00285 97b22c88552746319e44832bde517523 244 Pfam PF00696 Amino acid kinase family 2 233 3.7E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS00285 97b22c88552746319e44832bde517523 244 SUPERFAMILY SSF53633 1 242 1.07E-56 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS06085 991c06e910bbd7f60c27aa018503a136 150 PANTHER PTHR19384:SF81 1 144 1.3E-28 T 22-04-2016 LMES_RS06085 991c06e910bbd7f60c27aa018503a136 150 Pfam PF00258 Flavodoxin 5 128 7.8E-15 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LMES_RS06085 991c06e910bbd7f60c27aa018503a136 150 SUPERFAMILY SSF52218 1 145 9.72E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain LMES_RS06085 991c06e910bbd7f60c27aa018503a136 150 PANTHER PTHR19384 1 144 1.3E-28 T 22-04-2016 LMES_RS06085 991c06e910bbd7f60c27aa018503a136 150 Gene3D G3DSA:3.40.50.360 3 144 2.4E-30 T 22-04-2016 IPR029039 Flavoprotein-like domain LMES_RS05145 77620062167b06037a6d28aaddcefc7e 191 SUPERFAMILY SSF51366 2 188 1.24E-38 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS05145 77620062167b06037a6d28aaddcefc7e 191 Gene3D G3DSA:3.20.20.70 1 189 1.2E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05145 77620062167b06037a6d28aaddcefc7e 191 PANTHER PTHR22854 1 191 1.1E-35 T 22-04-2016 LMES_RS05145 77620062167b06037a6d28aaddcefc7e 191 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 184 1.3E-39 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 LMES_RS05145 77620062167b06037a6d28aaddcefc7e 191 PANTHER PTHR22854:SF6 1 191 1.1E-35 T 22-04-2016 LMES_RS05145 77620062167b06037a6d28aaddcefc7e 191 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 190 25.755 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 Pfam PF01702 Queuine tRNA-ribosyltransferase 137 391 1.7E-77 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 18 312 2.8E-132 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 SUPERFAMILY SSF51713 9 396 4.19E-139 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 9 390 51.588 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 17 310 2.3E-125 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 340 399 3.8E-15 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 PANTHER PTHR21148 341 396 2.4E-145 T 22-04-2016 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 PANTHER PTHR21148 3 318 2.4E-145 T 22-04-2016 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 PANTHER PTHR21148:SF26 341 396 2.4E-145 T 22-04-2016 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 PANTHER PTHR21148:SF26 3 318 2.4E-145 T 22-04-2016 LMES_RS01775 70c9050d5c941d1e648a2d3b52e008a2 406 Gene3D G3DSA:3.20.20.105 4 397 1.9E-153 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS03065 840becb0c6ba93dbadb9978821efe01f 182 Gene3D G3DSA:1.20.1440.20 13 182 7.2E-66 T 22-04-2016 IPR023353 LemA-like domain LMES_RS03065 840becb0c6ba93dbadb9978821efe01f 182 Pfam PF04011 LemA family 5 182 5.3E-71 T 22-04-2016 IPR007156 LemA LMES_RS03065 840becb0c6ba93dbadb9978821efe01f 182 SUPERFAMILY SSF140478 24 172 3.27E-55 T 22-04-2016 IPR023353 LemA-like domain LMES_RS03065 840becb0c6ba93dbadb9978821efe01f 182 PANTHER PTHR34478 1 182 2.9E-80 T 22-04-2016 LMES_RS03065 840becb0c6ba93dbadb9978821efe01f 182 PANTHER PTHR34478:SF2 1 182 2.9E-80 T 22-04-2016 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 PANTHER PTHR32108:SF0 1 313 9.3E-128 T 22-04-2016 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 35.767 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Gene3D G3DSA:3.30.1360.10 2 62 1.3E-12 T 22-04-2016 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 SMART SM00662 18 227 1.4E-88 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 312 2.1E-113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Gene3D G3DSA:1.10.150.20 250 313 2.2E-30 T 22-04-2016 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 PANTHER PTHR32108 1 313 9.3E-128 T 22-04-2016 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 SUPERFAMILY SSF56553 48 171 1.19E-39 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 SUPERFAMILY SSF47789 250 312 5.36E-23 T 22-04-2016 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 314 4.0E-20 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 221 2.2E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 304 3.9E-28 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 SUPERFAMILY SSF55257 4 48 1.83E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 SUPERFAMILY SSF55257 172 226 1.83E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 55 149 3.4E-22 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS01025 954e3ce6f545bacb38ad691002dc91fd 314 Gene3D G3DSA:2.170.120.12 63 170 3.6E-42 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 SMART SM00388 135 202 9.4E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 Gene3D G3DSA:3.30.565.10 190 362 3.1E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 SMART SM00387 247 359 8.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 2.3E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 2.3E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 356 2.3E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 337 2.3E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 SUPERFAMILY SSF55874 191 361 2.36E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 SUPERFAMILY SSF47384 118 200 2.55E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 PANTHER PTHR24423 60 366 1.8E-69 T 22-04-2016 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 357 2.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 Gene3D G3DSA:1.10.287.130 126 189 9.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 SMART SM00304 80 134 0.0032 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 Pfam PF00672 HAMP domain 61 131 2.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LMES_RS07735 6aa8cfe5aaf66073f157e8045d41104f 366 Pfam PF00512 His Kinase A (phospho-acceptor) domain 136 201 1.2E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 PANTHER PTHR30294 1 243 3.1E-86 T 22-04-2016 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 PANTHER PTHR30294 718 898 3.1E-86 T 22-04-2016 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 5 167 6.7E-60 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 SUPERFAMILY SSF101967 260 425 1.03E-5 T 22-04-2016 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 PANTHER PTHR30294:SF25 1 243 3.1E-86 T 22-04-2016 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 PANTHER PTHR30294:SF25 718 898 3.1E-86 T 22-04-2016 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 Pfam PF12698 ABC-2 family transporter protein 19 216 9.0E-14 T 22-04-2016 LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 703 904 7.4E-70 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 289 316 2.5E-4 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 215 239 2.6E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 240 267 9.5E-7 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 171 197 7.9E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 268 295 6.2E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 561 584 3.3E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 524 551 1.9E-6 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 636 663 2.6E-6 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 261 288 4.7E-6 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08525 116f4c81b1ffd5e9d55857f7cb4e92c5 915 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 545 572 2.3E-4 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 329 7.5E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 Gene3D G3DSA:3.40.50.720 118 301 7.4E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 Gene3D G3DSA:3.40.50.720 2 117 5.9E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 PANTHER PTHR10996 3 329 4.7E-97 T 22-04-2016 LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 PANTHER PTHR10996:SF161 3 329 4.7E-97 T 22-04-2016 LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 298 3.9E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 SUPERFAMILY SSF52283 1 137 4.68E-26 T 22-04-2016 LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS08260 13368f662c895a4a736359399d12a7ae 329 SUPERFAMILY SSF51735 104 299 3.86E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 Pfam PF01016 Ribosomal L27 protein 12 91 5.2E-32 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 11 94 25.227 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 38 79 7.0E-13 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 TIGRFAM TIGR00062 L27: ribosomal protein bL27 11 91 5.6E-35 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 SUPERFAMILY SSF110324 12 93 1.46E-29 T 22-04-2016 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 PANTHER PTHR15893 11 99 1.1E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 ProSitePatterns PS00831 Ribosomal protein L27 signature. 44 58 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 Gene3D G3DSA:2.40.50.100 30 93 2.2E-28 T 22-04-2016 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 PRINTS PR00063 Ribosomal protein L27 signature 14 38 1.7E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 PRINTS PR00063 Ribosomal protein L27 signature 39 63 1.7E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05765 5286c3d993ffb43e30a018652447f0ed 105 PRINTS PR00063 Ribosomal protein L27 signature 64 88 1.7E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PANTHER PTHR24322 152 184 9.8E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PANTHER PTHR24322 11 136 9.8E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 Pfam PF00106 short chain dehydrogenase 7 191 1.5E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 SUPERFAMILY SSF51735 6 252 1.64E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PANTHER PTHR24322:SF397 152 184 9.8E-49 T 22-04-2016 LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 PANTHER PTHR24322:SF397 11 136 9.8E-49 T 22-04-2016 LMES_RS04695 7c356af8eed0dd495a3088440afac9f0 287 Gene3D G3DSA:3.40.50.720 6 252 4.4E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09320 d68b10e85e204b4d56426e6273869d9c 255 SUPERFAMILY SSF47413 1 67 7.78E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS09320 d68b10e85e204b4d56426e6273869d9c 255 Gene3D G3DSA:1.10.260.40 4 66 9.0E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS09320 d68b10e85e204b4d56426e6273869d9c 255 Gene3D G3DSA:1.10.357.10 78 243 2.1E-6 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS09320 d68b10e85e204b4d56426e6273869d9c 255 PANTHER PTHR10245 3 63 1.7E-12 T 22-04-2016 LMES_RS09320 d68b10e85e204b4d56426e6273869d9c 255 SMART SM00530 7 62 3.7E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS09320 d68b10e85e204b4d56426e6273869d9c 255 Pfam PF01381 Helix-turn-helix 8 62 1.0E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS05635 512f6cd172eddcda00938a7aafa3553d 258 PANTHER PTHR33969:SF2 1 252 4.2E-59 T 22-04-2016 LMES_RS05635 512f6cd172eddcda00938a7aafa3553d 258 Pfam PF02616 Segregation and condensation protein ScpA 28 251 3.0E-34 T 22-04-2016 IPR003768 Segregation and condensation protein A LMES_RS05635 512f6cd172eddcda00938a7aafa3553d 258 Hamap MF_01805 Segregation and condensation protein A [scpA]. 11 253 22.37 T 22-04-2016 IPR003768 Segregation and condensation protein A LMES_RS05635 512f6cd172eddcda00938a7aafa3553d 258 PANTHER PTHR33969 1 252 4.2E-59 T 22-04-2016 LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.5E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.5E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.5E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.5E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.5E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 Gene3D G3DSA:3.40.50.720 2 254 1.1E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PANTHER PTHR24322 10 145 2.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PANTHER PTHR24322 161 195 2.5E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 253 1.7E-57 T 22-04-2016 LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PANTHER PTHR24322:SF328 10 145 2.5E-41 T 22-04-2016 LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 PANTHER PTHR24322:SF328 161 195 2.5E-41 T 22-04-2016 LMES_RS04520 a2f296f169c968be6c47376929b2f6d8 255 SUPERFAMILY SSF51735 4 254 3.8E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07085 053769469af5f46e102436da8d9979b9 326 SUPERFAMILY SSF64182 15 304 6.93E-68 T 22-04-2016 LMES_RS07085 053769469af5f46e102436da8d9979b9 326 Gene3D G3DSA:3.90.1640.10 16 197 1.1E-27 T 22-04-2016 LMES_RS07085 053769469af5f46e102436da8d9979b9 326 Pfam PF02272 DHHA1 domain 255 313 1.3E-6 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LMES_RS07085 053769469af5f46e102436da8d9979b9 326 Pfam PF01368 DHH family 18 160 1.2E-12 T 22-04-2016 IPR001667 DDH domain LMES_RS00595 276942710c07ac8128bb94c9061b17b9 281 PANTHER PTHR30622 1 274 5.7E-99 T 22-04-2016 LMES_RS00595 276942710c07ac8128bb94c9061b17b9 281 Pfam PF02673 Bacitracin resistance protein BacA 7 270 3.6E-74 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LMES_RS00595 276942710c07ac8128bb94c9061b17b9 281 PANTHER PTHR30622:SF5 1 274 5.7E-99 T 22-04-2016 LMES_RS00595 276942710c07ac8128bb94c9061b17b9 281 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 275 16.955 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 PANTHER PTHR12383:SF14 1 181 1.1E-42 T 22-04-2016 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 7 182 7.7E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 SUPERFAMILY SSF51306 22 187 7.19E-45 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 PANTHER PTHR12383 1 181 1.1E-42 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 ProSitePatterns PS00761 Signal peptidases I signature 3. 148 161 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 162 5.8E-16 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 5.8E-16 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 78 90 5.8E-16 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 Pfam PF00717 Peptidase S24-like 30 102 6.4E-16 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 Gene3D G3DSA:2.10.109.10 20 88 3.7E-32 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LMES_RS09360 b296d5fc6d64175acf77ed7b7bf4ff74 201 Gene3D G3DSA:2.10.109.10 143 188 3.7E-32 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LMES_RS04295 4a42b671a81250407512218b07f55b19 556 Pfam PF00128 Alpha amylase, catalytic domain 29 381 7.3E-121 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 Gene3D G3DSA:3.90.400.10 106 175 1.1E-32 T 22-04-2016 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 PANTHER PTHR10357:SF142 418 430 2.9E-234 T 22-04-2016 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 PANTHER PTHR10357:SF142 462 540 2.9E-234 T 22-04-2016 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 PANTHER PTHR10357:SF142 1 395 2.9E-234 T 22-04-2016 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 SMART SM00642 14 425 2.6E-152 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 Gene3D G3DSA:2.60.40.1180 487 555 4.0E-22 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LMES_RS04295 4a42b671a81250407512218b07f55b19 556 SUPERFAMILY SSF51445 5 481 2.26E-154 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04295 4a42b671a81250407512218b07f55b19 556 PANTHER PTHR10357 418 430 2.9E-234 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 PANTHER PTHR10357 462 540 2.9E-234 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 PANTHER PTHR10357 1 395 2.9E-234 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 SUPERFAMILY SSF51011 486 555 1.86E-15 T 22-04-2016 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 Gene3D G3DSA:3.20.20.80 4 105 1.5E-123 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 Gene3D G3DSA:3.20.20.80 176 483 1.5E-123 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04295 4a42b671a81250407512218b07f55b19 556 Pfam PF11941 Domain of unknown function (DUF3459) 469 544 5.2E-5 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 Hamap MF_00235 Adenylate kinase [adk]. 3 184 41.651 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 ProSitePatterns PS00113 Adenylate kinase signature. 83 94 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 PRINTS PR00094 Adenylate kinase signature 148 162 7.5E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 PRINTS PR00094 Adenylate kinase signature 131 146 7.5E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 PRINTS PR00094 Adenylate kinase signature 83 99 7.5E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 PRINTS PR00094 Adenylate kinase signature 34 48 7.5E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 PRINTS PR00094 Adenylate kinase signature 6 19 7.5E-28 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 Gene3D G3DSA:3.40.50.300 3 182 2.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 SUPERFAMILY SSF52540 2 184 4.16E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 Pfam PF00406 Adenylate kinase 7 161 3.6E-51 T 22-04-2016 LMES_RS01000 72cb89995cc77f58e210e446b22d95d6 187 PANTHER PTHR23359 3 187 5.6E-70 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:3.20.20.80 998 1112 4.9E-16 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 SUPERFAMILY SSF69360 80 218 2.98E-17 T 22-04-2016 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:2.10.270.10 80 147 6.3E-10 T 22-04-2016 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 SUPERFAMILY SSF51445 976 1147 3.44E-18 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 1 17 3.2E-5 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:2.10.270.10 238 295 4.6E-10 T 22-04-2016 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:2.10.270.10 164 217 1.9E-7 T 22-04-2016 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:2.10.270.10 297 341 3.1E-6 T 22-04-2016 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:3.20.20.80 520 710 2.7E-15 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:3.20.20.80 743 807 2.7E-15 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 SUPERFAMILY SSF69360 235 342 7.98E-16 T 22-04-2016 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 SUPERFAMILY SSF51445 745 784 1.03E-15 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 SUPERFAMILY SSF51445 504 705 1.03E-15 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Pfam PF02324 Glycosyl hydrolase family 70 410 1207 1.9E-229 T 22-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 95 151 2.9E-17 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 243 296 2.2E-17 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS06170 679f50d849237f4e28f43d35fda39d65 1264 Gene3D G3DSA:2.10.270.10 1210 1263 4.1E-5 T 22-04-2016 LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 PANTHER PTHR23117:SF13 1 144 2.9E-15 T 22-04-2016 LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 Gene3D G3DSA:3.40.50.300 81 143 3.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 Gene3D G3DSA:3.40.50.300 1 26 3.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 Pfam PF00625 Guanylate kinase 5 136 7.2E-16 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 SUPERFAMILY SSF52540 4 181 8.07E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 PANTHER PTHR23117 1 144 2.9E-15 T 22-04-2016 LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 SMART SM00072 3 185 2.0E-5 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LMES_RS08270 cdfd8d2e00e7063e9d18a3bed9ddd2a6 196 Gene3D G3DSA:3.30.63.10 34 80 1.2E-13 T 22-04-2016 LMES_RS07850 d364bd1efd6a47b5b57452dd57acebb9 233 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 16 192 7.1E-13 T 22-04-2016 IPR010057 Transcription activator MutR, C-terminal LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 Pfam PF01207 Dihydrouridine synthase (Dus) 30 330 1.5E-49 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 Gene3D G3DSA:1.10.1200.80 266 331 8.9E-6 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 PIRSF PIRSF006621 16 344 8.8E-76 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 PANTHER PTHR11082:SF30 25 329 4.3E-117 T 22-04-2016 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 113 131 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 PANTHER PTHR11082 25 329 4.3E-117 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 SUPERFAMILY SSF51395 27 334 1.34E-54 T 22-04-2016 LMES_RS03525 719171ad67039cfa357d6eba82f0ffb7 365 Gene3D G3DSA:3.20.20.70 26 262 1.8E-55 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 Gene3D G3DSA:3.30.1320.10 2 83 4.3E-37 T 22-04-2016 IPR023803 Ribosomal protein S16 domain LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 PANTHER PTHR12919 2 83 5.7E-47 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 SUPERFAMILY SSF54565 2 94 7.98E-36 T 22-04-2016 IPR023803 Ribosomal protein S16 domain LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 Pfam PF00886 Ribosomal protein S16 9 67 1.0E-26 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.9E-36 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06560 36e16ac78ddd5b3c17a63bd6245187fb 139 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 26.495 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS03315 094710d11e865a9562f6ba976f4be6ff 135 Pfam PF06146 Phosphate-starvation-inducible E 58 120 4.2E-10 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like LMES_RS03315 094710d11e865a9562f6ba976f4be6ff 135 PANTHER PTHR37819:SF1 1 135 4.0E-18 T 22-04-2016 LMES_RS03315 094710d11e865a9562f6ba976f4be6ff 135 PIRSF PIRSF029598 1 135 4.4E-26 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 LMES_RS03315 094710d11e865a9562f6ba976f4be6ff 135 PANTHER PTHR37819 1 135 4.0E-18 T 22-04-2016 LMES_RS02100 e042120b0a9063a46b5a45c934524cd1 340 PANTHER PTHR41265 1 143 6.0E-31 T 22-04-2016 LMES_RS02100 e042120b0a9063a46b5a45c934524cd1 340 PANTHER PTHR41265:SF1 1 143 6.0E-31 T 22-04-2016 LMES_RS02100 e042120b0a9063a46b5a45c934524cd1 340 Pfam PF06054 Competence protein CoiA-like family 5 174 7.9E-39 T 22-04-2016 IPR010330 Competence-induced protein CoiA-like LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 Gene3D G3DSA:3.90.226.10 24 214 8.8E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 Pfam PF00378 Enoyl-CoA hydratase/isomerase 25 272 3.0E-71 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 PANTHER PTHR11941 1 270 1.6E-150 T 22-04-2016 LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 4 276 48.434 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 Gene3D G3DSA:1.10.12.10 216 265 7.2E-29 T 22-04-2016 IPR014748 Crontonase, C-terminal LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 SUPERFAMILY SSF52096 11 273 1.33E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 TIGRFAM TIGR01929 menB: naphthoate synthase 12 273 7.4E-111 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS00080 2090bf788a8e52b653e512003853a77e 277 PANTHER PTHR11941:SF20 1 270 1.6E-150 T 22-04-2016 LMES_RS02720 19975090db358eed5703d111043af230 749 PANTHER PTHR11070 535 745 1.2E-230 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS02720 19975090db358eed5703d111043af230 749 PANTHER PTHR11070 1 518 1.2E-230 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS02720 19975090db358eed5703d111043af230 749 SUPERFAMILY SSF52540 3 648 1.25E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02720 19975090db358eed5703d111043af230 749 Gene3D G3DSA:1.10.10.160 115 192 2.6E-24 T 22-04-2016 IPR013986 DExx box DNA helicase domain LMES_RS02720 19975090db358eed5703d111043af230 749 Pfam PF13361 UvrD-like helicase C-terminal domain 280 619 7.0E-76 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LMES_RS02720 19975090db358eed5703d111043af230 749 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 6 746 0.0 T 22-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 LMES_RS02720 19975090db358eed5703d111043af230 749 Gene3D G3DSA:1.10.486.10 391 546 2.1E-44 T 22-04-2016 LMES_RS02720 19975090db358eed5703d111043af230 749 Gene3D G3DSA:3.40.50.300 288 390 2.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02720 19975090db358eed5703d111043af230 749 Gene3D G3DSA:3.40.50.300 558 648 2.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02720 19975090db358eed5703d111043af230 749 Gene3D G3DSA:3.40.50.300 4 111 2.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02720 19975090db358eed5703d111043af230 749 Gene3D G3DSA:3.40.50.300 193 287 2.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02720 19975090db358eed5703d111043af230 749 PANTHER PTHR11070:SF7 535 745 1.2E-230 T 22-04-2016 LMES_RS02720 19975090db358eed5703d111043af230 749 PANTHER PTHR11070:SF7 1 518 1.2E-230 T 22-04-2016 LMES_RS02720 19975090db358eed5703d111043af230 749 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 274 2.5E-79 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 Pfam PF00764 Arginosuccinate synthase 6 392 1.6E-168 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 397 51.32 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 395 3.3E-159 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 Gene3D G3DSA:3.40.50.620 5 171 2.2E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 Gene3D G3DSA:3.90.1260.10 173 397 9.3E-90 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 SUPERFAMILY SSF52402 4 202 7.06E-46 T 22-04-2016 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 PANTHER PTHR11587 6 402 7.9E-205 T 22-04-2016 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 PANTHER PTHR11587:SF2 6 402 7.9E-205 T 22-04-2016 LMES_RS06425 d58998939c1bc6beb55f905b9d295ba8 408 SUPERFAMILY SSF69864 172 401 7.19E-93 T 22-04-2016 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 166 1.3E-53 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 SUPERFAMILY SSF46785 83 157 1.02E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 PANTHER PTHR34298 1 182 2.1E-53 T 22-04-2016 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 PANTHER PTHR34298:SF2 1 182 2.1E-53 T 22-04-2016 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 183 32.338 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 SUPERFAMILY SSF46785 3 79 1.5E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 174 1.1E-46 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 PIRSF PIRSF019345 1 198 8.3E-52 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 Gene3D G3DSA:1.10.10.10 5 79 1.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05630 25cff5880ef20cb8d69dc94050838b66 199 Gene3D G3DSA:1.10.10.10 84 157 6.0E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 3.8E-188 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 Gene3D G3DSA:3.30.70.360 214 323 5.2E-44 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 SUPERFAMILY SSF53187 326 407 1.8E-70 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 SUPERFAMILY SSF53187 5 214 1.8E-70 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 PANTHER PTHR11014 6 94 8.7E-166 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 PANTHER PTHR11014 135 411 8.7E-166 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 SUPERFAMILY SSF55031 213 324 7.33E-40 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 181 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 Gene3D G3DSA:3.40.630.10 326 410 2.1E-111 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 Gene3D G3DSA:3.40.630.10 2 213 2.1E-111 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 Hamap MF_00550 Peptidase T [pepT]. 4 408 55.738 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 PANTHER PTHR11014:SF3 6 94 8.7E-166 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 PANTHER PTHR11014:SF3 135 411 8.7E-166 T 22-04-2016 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 Pfam PF07687 Peptidase dimerisation domain 212 309 6.4E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 PIRSF PIRSF037215 2 411 5.1E-180 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LMES_RS03710 d75e216ebd4658857562ed73dc81ef9b 411 Pfam PF01546 Peptidase family M20/M25/M40 143 406 2.6E-9 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 PANTHER PTHR32419 76 357 5.7E-82 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 PANTHER PTHR32419:SF6 76 357 5.7E-82 T 22-04-2016 LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 Pfam PF13410 Glutathione S-transferase, C-terminal domain 235 304 1.7E-13 T 22-04-2016 LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 SUPERFAMILY SSF47616 197 327 2.09E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 Gene3D G3DSA:3.40.30.10 74 204 1.1E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 Pfam PF13409 Glutathione S-transferase, N-terminal domain 89 183 3.7E-9 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LMES_RS00485 b892369c452a534065b5bb5f31e9a015 360 Gene3D G3DSA:1.20.1050.10 205 316 4.1E-21 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 Pfam PF10509 Galactokinase galactose-binding signature 10 58 4.6E-20 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PANTHER PTHR10457:SF6 2 389 2.3E-129 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 Hamap MF_00246 Galactokinase [galK]. 25 387 48.612 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PIRSF PIRSF000530 1 389 2.0E-124 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 Pfam PF08544 GHMP kinases C terminal 286 360 8.7E-15 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00473 Galactokinase signature 27 45 6.4E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00473 Galactokinase signature 113 131 6.4E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00473 Galactokinase signature 270 284 6.4E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00473 Galactokinase signature 92 103 6.4E-29 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 SUPERFAMILY SSF54211 2 202 1.59E-61 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00959 Mevalonate kinase family signature 120 142 1.2E-42 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00959 Mevalonate kinase family signature 25 49 1.2E-42 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00959 Mevalonate kinase family signature 163 182 1.2E-42 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PRINTS PR00959 Mevalonate kinase family signature 334 351 1.2E-42 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 Gene3D G3DSA:3.30.70.890 211 377 8.0E-61 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 TIGRFAM TIGR00131 gal_kin: galactokinase 6 386 3.6E-121 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 SUPERFAMILY SSF55060 206 386 3.78E-58 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 PANTHER PTHR10457 2 389 2.3E-129 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 Gene3D G3DSA:3.30.230.10 3 210 9.8E-73 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS05705 30430262d8362b0f8f8da03856cf45bd 390 Pfam PF00288 GHMP kinases N terminal domain 115 182 3.9E-12 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 PANTHER PTHR10996 1 309 2.9E-104 T 22-04-2016 LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 309 5.2E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 Gene3D G3DSA:3.40.50.720 1 109 2.3E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 Gene3D G3DSA:3.40.50.720 110 277 2.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 SUPERFAMILY SSF51735 98 277 1.89E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 7.6E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 SMART SM00997 127 272 0.0072 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LMES_RS02120 87485ed1556293f27eb0ddc2ef23636d 309 SUPERFAMILY SSF52283 16 119 1.76E-29 T 22-04-2016 LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 PANTHER PTHR24220 7 249 5.7E-87 T 22-04-2016 LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 Pfam PF00005 ABC transporter 22 178 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 Gene3D G3DSA:3.40.50.300 2 236 1.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 SMART SM00382 31 236 1.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 PANTHER PTHR24220:SF534 7 249 5.7E-87 T 22-04-2016 LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 SUPERFAMILY SSF52540 4 233 2.44E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00375 d395e444cc3149ff66f3100c55dade24 251 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS09160 be2285425fc2197b0bcb24d084ddca28 171 Gene3D G3DSA:3.40.630.30 1 134 5.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS09160 be2285425fc2197b0bcb24d084ddca28 171 SUPERFAMILY SSF55729 1 128 1.42E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS09160 be2285425fc2197b0bcb24d084ddca28 171 Pfam PF00583 Acetyltransferase (GNAT) family 50 95 1.4E-4 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 PANTHER PTHR30146 2 306 3.2E-95 T 22-04-2016 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 SMART SM00354 3 74 9.0E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 Pfam PF13377 Periplasmic binding protein-like domain 170 326 4.3E-37 T 22-04-2016 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 Gene3D G3DSA:3.40.50.2300 169 327 1.7E-49 T 22-04-2016 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 Gene3D G3DSA:1.10.260.40 5 60 1.6E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 SUPERFAMILY SSF47413 2 60 1.79E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 1.1E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 Gene3D G3DSA:3.40.50.2300 61 168 1.4E-20 T 22-04-2016 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 PANTHER PTHR30146:SF56 2 306 3.2E-95 T 22-04-2016 LMES_RS03825 b9aab4dd6c52ecf893377c9e0f372dbe 336 SUPERFAMILY SSF53822 63 329 1.58E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS02285 fcd5b2d2332cc48f4e5a5f3d529176a0 168 SUPERFAMILY SSF54909 100 147 8.05E-5 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PANTHER PTHR12128 7 287 4.2E-100 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 SUPERFAMILY SSF51569 7 287 7.64E-85 T 22-04-2016 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 SMART SM01130 3 286 1.0E-105 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 Pfam PF00701 Dihydrodipicolinate synthetase family 6 287 6.1E-81 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 1.7E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 1.7E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.7E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.7E-31 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 Gene3D G3DSA:3.20.20.70 7 288 2.8E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PIRSF PIRSF001365 4 288 2.0E-81 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 PANTHER PTHR12128:SF34 7 287 4.2E-100 T 22-04-2016 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 287 1.6E-88 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03215 10c43282f8ce1e74359136f926b7812b 288 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 56.463 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 385 51.585 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 SUPERFAMILY SSF55973 3 108 1.49E-38 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 384 1.7E-164 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 SUPERFAMILY SSF55973 235 383 3.81E-66 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 SUPERFAMILY SSF55973 113 234 7.46E-44 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 99 8.2E-36 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 373 1.0E-66 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 116 233 6.3E-41 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Gene3D G3DSA:3.30.300.10 246 384 7.0E-67 T 22-04-2016 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Gene3D G3DSA:3.30.300.10 133 235 7.6E-38 T 22-04-2016 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 PIRSF PIRSF000497 1 385 6.7E-168 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 Gene3D G3DSA:3.30.300.10 10 132 4.8E-38 T 22-04-2016 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 PANTHER PTHR11964 5 380 6.9E-221 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS07565 64729a815543d93ffc77c0e8e6d97c04 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 45.829 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 Gene3D G3DSA:4.10.950.10 196 275 3.0E-32 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 PIRSF PIRSF002158 4 277 5.6E-96 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 PANTHER PTHR13691 2 275 4.3E-135 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 43 117 2.7E-30 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 2.0E-129 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 Gene3D G3DSA:2.40.50.140 2 114 1.3E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 SUPERFAMILY SSF50104 126 272 3.25E-58 T 22-04-2016 IPR008991 Translation protein SH3-like domain LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 Gene3D G3DSA:2.30.30.30 118 195 6.5E-34 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 5.6E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 SMART SM01382 124 253 7.8E-90 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 SUPERFAMILY SSF50249 2 125 2.43E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 LMES_RS00915 3d78c7f543c94c3a7d397ad72a083557 277 SMART SM01383 42 118 3.0E-41 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08475 ff9e96e4caf68a8833ba6562e3b91b68 329 Pfam PF01569 PAP2 superfamily 193 316 1.0E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS08475 ff9e96e4caf68a8833ba6562e3b91b68 329 SMART SM00014 190 314 8.3E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS08475 ff9e96e4caf68a8833ba6562e3b91b68 329 Gene3D G3DSA:1.20.144.10 162 311 7.0E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS08475 ff9e96e4caf68a8833ba6562e3b91b68 329 SUPERFAMILY SSF48317 153 315 4.71E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS04960 d23575940dd510f05b9ae090ee4ce7a0 297 PANTHER PTHR30195:SF16 4 294 1.9E-49 T 22-04-2016 LMES_RS04960 d23575940dd510f05b9ae090ee4ce7a0 297 SUPERFAMILY SSF52540 240 294 7.77E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04960 d23575940dd510f05b9ae090ee4ce7a0 297 PANTHER PTHR30195 4 294 1.9E-49 T 22-04-2016 LMES_RS04960 d23575940dd510f05b9ae090ee4ce7a0 297 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 200 1.1E-22 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 LMES_RS01160 5898359bad33c8f8f97511d6a502347b 223 PANTHER PTHR23029 1 203 1.5E-47 T 22-04-2016 LMES_RS01160 5898359bad33c8f8f97511d6a502347b 223 PANTHER PTHR23029:SF29 1 203 1.5E-47 T 22-04-2016 LMES_RS01160 5898359bad33c8f8f97511d6a502347b 223 Gene3D G3DSA:3.40.50.1240 1 218 4.5E-52 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS01160 5898359bad33c8f8f97511d6a502347b 223 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 216 6.0E-36 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS01160 5898359bad33c8f8f97511d6a502347b 223 SMART SM00855 4 180 1.2E-20 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS01160 5898359bad33c8f8f97511d6a502347b 223 SUPERFAMILY SSF53254 1 218 4.58E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS03430 18bea6ced5527141f14c20af5acb71c0 330 Pfam PF04203 Sortase family 136 283 4.1E-25 T 22-04-2016 IPR005754 Sortase family LMES_RS03430 18bea6ced5527141f14c20af5acb71c0 330 SUPERFAMILY SSF63817 122 287 6.8E-24 T 22-04-2016 IPR023365 Sortase domain LMES_RS03430 18bea6ced5527141f14c20af5acb71c0 330 Gene3D G3DSA:2.40.260.10 127 288 1.3E-35 T 22-04-2016 IPR023365 Sortase domain LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 Gene3D G3DSA:3.40.50.720 339 382 1.1E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 Gene3D G3DSA:3.40.50.720 193 270 1.1E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 Gene3D G3DSA:3.40.50.720 7 86 1.1E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 SUPERFAMILY SSF51971 8 279 3.24E-51 T 22-04-2016 LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 SUPERFAMILY SSF51971 349 379 3.24E-51 T 22-04-2016 LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 Pfam PF13450 NAD(P)-binding Rossmann-like domain 14 80 4.5E-17 T 22-04-2016 LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 Pfam PF03275 UDP-galactopyranose mutase 158 364 1.0E-80 T 22-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 PANTHER PTHR21197 1 387 1.8E-99 T 22-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 10 380 1.2E-120 T 22-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LMES_RS06120 ccfe531a8d4488f6dd909e2e5d980817 396 SUPERFAMILY SSF54373 261 330 5.89E-25 T 22-04-2016 LMES_RS00530 71963554b39ab8b74a6277908b7fc3b1 443 PIRSF PIRSF006060 1 438 6.4E-59 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS00530 71963554b39ab8b74a6277908b7fc3b1 443 Pfam PF13520 Amino acid permease 19 408 7.2E-37 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS00530 71963554b39ab8b74a6277908b7fc3b1 443 PANTHER PTHR11785 8 428 1.3E-121 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS00530 71963554b39ab8b74a6277908b7fc3b1 443 PANTHER PTHR11785:SF197 8 428 1.3E-121 T 22-04-2016 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 PIRSF PIRSF000732 1 571 1.8E-213 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 Gene3D G3DSA:3.50.30.10 135 257 2.2E-42 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 2.4E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 567 6.9E-224 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 Gene3D G3DSA:3.20.20.60 258 570 3.2E-112 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 253 542 6.6E-122 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 2.2E-30 T 22-04-2016 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 2.2E-30 T 22-04-2016 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 2.2E-30 T 22-04-2016 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 2.2E-30 T 22-04-2016 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 1.0E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 SUPERFAMILY SSF47831 24 145 2.75E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 SUPERFAMILY SSF52009 127 248 1.15E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 Gene3D G3DSA:1.10.274.10 24 134 6.8E-39 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 SUPERFAMILY SSF51621 251 550 2.22E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LMES_RS07975 9fc0febf06cc545c90e5e6010d4f42ab 571 PANTHER PTHR22931 70 551 3.1E-197 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 650 675 5.6E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 618 634 5.6E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 471 489 5.6E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 606 5.6E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 330 336 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Gene3D G3DSA:3.40.1110.10 318 520 7.6E-58 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF81653 117 227 2.48E-31 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Gene3D G3DSA:1.20.1110.10 587 881 5.0E-118 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Gene3D G3DSA:1.20.1110.10 59 111 5.0E-118 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 12 879 1.5E-156 T 22-04-2016 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Pfam PF00122 E1-E2 ATPase 84 319 2.9E-68 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 213 380 2.0E-28 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 589 701 3.4E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 184 8.4E-22 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Pfam PF00690 Cation transporter/ATPase, N-terminus 10 74 1.9E-19 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF81660 334 525 8.72E-54 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SMART SM00831 5 79 2.1E-30 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PANTHER PTHR24093 789 886 0.0 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PANTHER PTHR24093 13 753 0.0 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Gene3D G3DSA:2.70.150.10 112 227 3.0E-45 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Gene3D G3DSA:2.70.150.10 16 58 3.0E-45 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Pfam PF00702 haloacid dehalogenase-like hydrolase 328 632 2.9E-24 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF56784 468 722 1.92E-57 T 22-04-2016 IPR023214 HAD-like domain LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF56784 327 346 1.92E-57 T 22-04-2016 IPR023214 HAD-like domain LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF81665 228 322 6.15E-129 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF81665 5 117 6.15E-129 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 SUPERFAMILY SSF81665 668 886 6.15E-129 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 328 342 2.8E-38 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 545 2.8E-38 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 637 2.8E-38 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 654 2.8E-38 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 2.8E-38 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 524 2.8E-38 T 22-04-2016 LMES_RS02065 41f3a9055a8bf5122347af2f099ff027 887 Pfam PF00689 Cation transporting ATPase, C-terminus 703 879 8.7E-46 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PRINTS PR00783 Major intrinsic protein family signature 3 22 2.09E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PRINTS PR00783 Major intrinsic protein family signature 168 190 2.09E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PRINTS PR00783 Major intrinsic protein family signature 216 236 2.09E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.09E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PRINTS PR00783 Major intrinsic protein family signature 137 155 2.09E-21 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PANTHER PTHR19139 1 237 2.4E-43 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 SUPERFAMILY SSF81338 2 237 3.79E-49 T 22-04-2016 IPR023271 Aquaporin-like LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 PANTHER PTHR19139:SF147 1 237 2.4E-43 T 22-04-2016 LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 Gene3D G3DSA:1.20.1080.10 2 237 1.1E-57 T 22-04-2016 IPR023271 Aquaporin-like LMES_RS06080 b243429d8ea1751b9562c650a7429598 239 Pfam PF00230 Major intrinsic protein 2 231 1.4E-29 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 PANTHER PTHR10285:SF7 18 176 4.7E-49 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 PANTHER PTHR10285:SF7 192 228 4.7E-49 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 PANTHER PTHR10285 18 176 4.7E-49 T 22-04-2016 LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 PANTHER PTHR10285 192 228 4.7E-49 T 22-04-2016 LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 Gene3D G3DSA:3.40.50.300 16 224 1.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 18 147 4.1E-15 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LMES_RS08455 43dbe396c0b59f96f533ab681bbbe319 229 SUPERFAMILY SSF52540 13 225 1.86E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 Gene3D G3DSA:3.40.50.300 2 241 7.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 PANTHER PTHR24220 5 244 1.6E-103 T 22-04-2016 LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 SMART SM00382 28 218 1.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 PIRSF PIRSF039085 1 246 4.4E-88 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 PANTHER PTHR24220:SF327 5 244 1.6E-103 T 22-04-2016 LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 Pfam PF00005 ABC transporter 19 170 1.7E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00505 69bc4f166ceeab849d0c18df6f876d79 250 SUPERFAMILY SSF52540 3 238 1.36E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 Gene3D G3DSA:3.20.20.70 1 235 5.8E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 PANTHER PTHR21235 1 236 2.5E-93 T 22-04-2016 LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 236 35.006 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 Pfam PF00977 Histidine biosynthesis protein 1 229 1.4E-75 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 SUPERFAMILY SSF51366 1 235 2.49E-67 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 PANTHER PTHR21235:SF15 1 236 2.5E-93 T 22-04-2016 LMES_RS06910 2c518ab1646a75f2cf7ed8f9e091c245 238 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 231 3.3E-79 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 LMES_RS09355 27b0ad7c5cf94062ff88d973c9b8f960 154 Gene3D G3DSA:3.40.630.30 10 138 1.7E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS09355 27b0ad7c5cf94062ff88d973c9b8f960 154 SUPERFAMILY SSF55729 15 141 2.3E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS09355 27b0ad7c5cf94062ff88d973c9b8f960 154 Pfam PF13673 Acetyltransferase (GNAT) domain 58 138 2.9E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 SUPERFAMILY SSF53067 81 220 8.42E-65 T 22-04-2016 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PANTHER PTHR21060:SF11 70 417 2.2E-188 T 22-04-2016 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PANTHER PTHR21060:SF11 1 46 2.2E-188 T 22-04-2016 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PRINTS PR00471 Acetate kinase family signature 4 15 4.4E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PRINTS PR00471 Acetate kinase family signature 345 361 4.4E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PRINTS PR00471 Acetate kinase family signature 197 210 4.4E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PRINTS PR00471 Acetate kinase family signature 323 336 4.4E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PRINTS PR00471 Acetate kinase family signature 227 248 4.4E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PRINTS PR00471 Acetate kinase family signature 399 411 4.4E-42 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 Gene3D G3DSA:3.30.420.40 114 228 2.4E-8 T 22-04-2016 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PANTHER PTHR21060 70 417 2.2E-188 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PANTHER PTHR21060 1 46 2.2E-188 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 Hamap MF_00020 Acetate kinase [ackA]. 1 419 177.38 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 Pfam PF00871 Acetokinase family 4 412 3.5E-144 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 TIGRFAM TIGR00016 ackA: acetate kinase 64 417 3.9E-145 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 SUPERFAMILY SSF53067 181 417 1.19E-88 T 22-04-2016 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 227 244 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 PIRSF PIRSF000722 51 419 6.6E-137 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 Gene3D G3DSA:3.30.420.40 229 416 1.4E-75 T 22-04-2016 LMES_RS02240 9f490ca43e5c11e31400dafb7fc77ebe 419 SUPERFAMILY SSF53067 2 52 8.42E-65 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Gene3D G3DSA:3.90.640.10 233 295 2.5E-22 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Pfam PF02491 SHS2 domain inserted in FTSA 82 156 1.2E-17 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 356 1.5E-82 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 PANTHER PTHR32432 1 394 4.7E-104 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Pfam PF14450 Cell division protein FtsA 205 365 3.0E-16 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Gene3D G3DSA:3.30.420.40 196 231 7.8E-15 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Gene3D G3DSA:3.30.420.40 296 348 7.8E-15 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 PANTHER PTHR32432:SF4 1 394 4.7E-104 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 SUPERFAMILY SSF53067 6 193 7.63E-48 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 PIRSF PIRSF003101 1 414 8.2E-117 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Gene3D G3DSA:3.30.420.40 1 138 9.9E-38 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 SMART SM00842 7 194 5.3E-76 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 SUPERFAMILY SSF53067 197 360 1.01E-32 T 22-04-2016 LMES_RS06600 5df4d2b9c94d1fea4d972fed3e871de7 443 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 440 24.525 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LMES_RS07210 35d92c649be62ac547a188ad6afaeffe 234 PANTHER PTHR24220 6 209 3.4E-49 T 22-04-2016 LMES_RS07210 35d92c649be62ac547a188ad6afaeffe 234 SUPERFAMILY SSF52540 3 209 6.68E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07210 35d92c649be62ac547a188ad6afaeffe 234 Pfam PF00005 ABC transporter 20 157 1.5E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS07210 35d92c649be62ac547a188ad6afaeffe 234 Gene3D G3DSA:3.40.50.300 2 217 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07210 35d92c649be62ac547a188ad6afaeffe 234 SMART SM00382 29 206 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01735 9b1c1ce19e3ddf13e189833814ba5c7c 248 Gene3D G3DSA:1.10.3720.10 12 223 1.8E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01735 9b1c1ce19e3ddf13e189833814ba5c7c 248 SUPERFAMILY SSF161098 16 216 5.23E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01735 9b1c1ce19e3ddf13e189833814ba5c7c 248 PANTHER PTHR30614 1 229 1.9E-70 T 22-04-2016 LMES_RS01735 9b1c1ce19e3ddf13e189833814ba5c7c 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 5.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01735 9b1c1ce19e3ddf13e189833814ba5c7c 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 118 2.9E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS03225 325d5ff75cf0201dd887839f1d5c36e0 267 Pfam PF02631 RecX family 84 206 1.1E-29 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 LMES_RS03225 325d5ff75cf0201dd887839f1d5c36e0 267 PANTHER PTHR33602:SF1 4 227 8.2E-39 T 22-04-2016 LMES_RS03225 325d5ff75cf0201dd887839f1d5c36e0 267 Gene3D G3DSA:1.10.10.10 107 151 5.0E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03225 325d5ff75cf0201dd887839f1d5c36e0 267 PANTHER PTHR33602 4 227 8.2E-39 T 22-04-2016 LMES_RS03225 325d5ff75cf0201dd887839f1d5c36e0 267 Hamap MF_01114 Regulatory protein RecX [recX]. 41 208 16.766 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 Hamap MF_00165 Thymidylate kinase [tmk]. 5 209 31.006 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 199 3.6E-60 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 Gene3D G3DSA:3.40.50.300 4 210 6.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 SUPERFAMILY SSF52540 1 211 3.35E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 PANTHER PTHR10344 1 211 1.7E-64 T 22-04-2016 LMES_RS01295 2ebd4416aa42002fc6eaec4b69b6a33c 213 Pfam PF02223 Thymidylate kinase 9 198 6.3E-55 T 22-04-2016 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 SUPERFAMILY SSF53271 7 157 6.97E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 Gene3D G3DSA:3.40.50.2020 161 286 3.0E-38 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 Gene3D G3DSA:3.40.50.2020 5 160 3.4E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 313 2.2E-100 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 311 1.3E-24 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 SMART SM01400 5 121 6.4E-61 T 22-04-2016 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 SUPERFAMILY SSF53271 88 302 1.75E-41 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 PANTHER PTHR10210:SF41 7 319 5.6E-135 T 22-04-2016 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 121 2.2E-41 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS03350 75b0ca896a1ea6ff617b84d19d342d09 323 PANTHER PTHR10210 7 319 5.6E-135 T 22-04-2016 LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 SUPERFAMILY SSF56784 3 266 1.11E-48 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 PANTHER PTHR10000:SF27 1 268 3.7E-40 T 22-04-2016 LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 261 5.7E-39 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 22-04-2016 LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 9.4E-22 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 PANTHER PTHR10000 1 268 3.7E-40 T 22-04-2016 LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 Gene3D G3DSA:3.40.50.1000 2 75 2.1E-39 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 Gene3D G3DSA:3.40.50.1000 183 267 2.1E-39 T 22-04-2016 IPR023214 HAD-like domain LMES_RS09400 a145ced7268b1ab87d9bee3650a25ccc 269 Gene3D G3DSA:3.30.1240.10 93 182 5.9E-14 T 22-04-2016 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 SUPERFAMILY SSF55874 2 214 9.95E-56 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 SUPERFAMILY SSF118116 444 632 2.88E-47 T 22-04-2016 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 Pfam PF08676 MutL C terminal dimerisation domain 447 590 2.3E-39 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 4.0E-10 T 22-04-2016 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 1.7E-32 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 306 2.7E-96 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 630 26.648 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 SMART SM01340 208 326 8.0E-48 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 PANTHER PTHR10073 3 643 1.6E-161 T 22-04-2016 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 SMART SM00853 448 590 6.9E-49 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 Gene3D G3DSA:3.30.565.10 2 202 4.5E-73 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 SUPERFAMILY SSF54211 191 326 2.01E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS07035 7bbbd296fdd6d114f426a82d98eca974 648 Gene3D G3DSA:3.30.230.10 203 325 2.7E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 PANTHER PTHR11808:SF12 1 241 3.1E-214 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 PANTHER PTHR11808:SF12 270 430 3.1E-214 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 SUPERFAMILY SSF53383 9 426 1.6E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 Gene3D G3DSA:3.90.1150.10 293 428 7.8E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 426 2.4E-137 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 PIRSF PIRSF001434 1 430 6.3E-127 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 204 218 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 10 426 3.1E-183 T 22-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 PANTHER PTHR11808 1 241 3.1E-214 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 PANTHER PTHR11808 270 430 3.1E-214 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08075 9523303503aa7d053fe7cd6d73516e78 430 Gene3D G3DSA:3.40.640.10 9 291 1.8E-109 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS04435 97ab51fad250875f84a8edaf57184279 168 Pfam PF01965 DJ-1/PfpI family 3 165 1.2E-52 T 22-04-2016 IPR002818 DJ-1/PfpI LMES_RS04435 97ab51fad250875f84a8edaf57184279 168 SUPERFAMILY SSF52317 1 167 9.76E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04435 97ab51fad250875f84a8edaf57184279 168 PANTHER PTHR11019:SF115 1 164 4.2E-57 T 22-04-2016 LMES_RS04435 97ab51fad250875f84a8edaf57184279 168 Gene3D G3DSA:3.40.50.880 1 167 6.3E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04435 97ab51fad250875f84a8edaf57184279 168 PANTHER PTHR11019 1 164 4.2E-57 T 22-04-2016 LMES_RS04435 97ab51fad250875f84a8edaf57184279 168 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 168 3.5E-50 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Gene3D G3DSA:3.40.30.10 357 459 6.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Gene3D G3DSA:3.40.30.10 469 561 2.3E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PANTHER PTHR22912:SF48 1 315 1.4E-108 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Gene3D G3DSA:3.50.50.60 121 232 2.1E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 SUPERFAMILY SSF52833 358 466 8.48E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.5E-34 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 2.5E-34 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.5E-34 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.5E-34 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 2.5E-34 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 300 7.4E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PANTHER PTHR22912 1 315 1.4E-108 T 22-04-2016 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Pfam PF13192 Thioredoxin domain 484 558 3.0E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 SUPERFAMILY SSF51905 2 306 8.64E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 240 261 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 1.5E-58 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 SUPERFAMILY SSF52833 472 561 1.92E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Gene3D G3DSA:3.50.50.60 246 311 1.5E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS06385 0d98c38ebc16a711abf597fca91227a7 569 Gene3D G3DSA:3.50.50.60 4 120 1.5E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00015 dccc0672c97c17db4c74b424d5fff90e 148 Gene3D G3DSA:3.10.290.10 2 68 1.1E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS00015 dccc0672c97c17db4c74b424d5fff90e 148 PANTHER PTHR32319:SF3 6 93 3.5E-22 T 22-04-2016 LMES_RS00015 dccc0672c97c17db4c74b424d5fff90e 148 PANTHER PTHR32319 6 93 3.5E-22 T 22-04-2016 LMES_RS00015 dccc0672c97c17db4c74b424d5fff90e 148 Pfam PF13275 S4 domain 5 68 1.7E-25 T 22-04-2016 LMES_RS00015 dccc0672c97c17db4c74b424d5fff90e 148 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 5 63 1.8E-26 T 22-04-2016 IPR014330 RNA-binding S4-related,YaaA LMES_RS00015 dccc0672c97c17db4c74b424d5fff90e 148 SUPERFAMILY SSF55174 3 68 3.92E-17 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 Gene3D G3DSA:3.10.105.10 338 531 8.7E-7 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 PANTHER PTHR30290 124 549 1.6E-78 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 PANTHER PTHR30290 20 80 1.6E-78 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 SUPERFAMILY SSF53850 124 564 9.41E-58 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 Pfam PF12793 Sugar transport-related sRNA regulator N-term 3 94 1.4E-8 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 Gene3D G3DSA:3.90.76.10 135 274 2.6E-26 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 167 478 1.5E-30 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 PANTHER PTHR30290:SF30 124 549 1.6E-78 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 PANTHER PTHR30290:SF30 20 80 1.6E-78 T 22-04-2016 LMES_RS08290 805a71c9b9874e6646d70b902f082673 569 Gene3D G3DSA:3.40.190.10 275 312 2.5E-5 T 22-04-2016 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 2 1229 17.036 T 22-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070:SF14 323 519 8.5E-229 T 22-04-2016 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070:SF14 6 182 8.5E-229 T 22-04-2016 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070:SF14 538 810 8.5E-229 T 22-04-2016 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070:SF14 843 1206 8.5E-229 T 22-04-2016 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 4 1228 0.0 T 22-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Gene3D G3DSA:3.90.320.10 986 1226 1.4E-19 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Pfam PF13361 UvrD-like helicase C-terminal domain 464 865 2.0E-33 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Gene3D G3DSA:3.40.50.300 468 603 1.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Gene3D G3DSA:3.40.50.300 763 921 1.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 SUPERFAMILY SSF52540 348 795 1.67E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 SUPERFAMILY SSF52540 3 177 1.67E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 SUPERFAMILY SSF52540 844 870 1.67E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Gene3D G3DSA:1.10.486.10 610 750 2.8E-27 T 22-04-2016 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 SUPERFAMILY SSF52980 997 1207 1.5E-22 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070 323 519 8.5E-229 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070 6 182 8.5E-229 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070 538 810 8.5E-229 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 PANTHER PTHR11070 843 1206 8.5E-229 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 454 1.5E-66 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Gene3D G3DSA:3.40.50.300 4 162 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Gene3D G3DSA:3.40.50.300 358 457 1.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06540 b116e39b5a73b914cf7d51d6da40d594 1230 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1049 1208 1.7E-6 T 22-04-2016 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PANTHER PTHR10584 1 302 3.8E-83 T 22-04-2016 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 Pfam PF00294 pfkB family carbohydrate kinase 3 296 6.8E-61 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 301 5.5E-98 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 Gene3D G3DSA:3.40.1190.20 2 302 4.6E-88 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 SUPERFAMILY SSF53613 3 302 1.71E-78 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PRINTS PR00990 Ribokinase signature 34 53 1.1E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PRINTS PR00990 Ribokinase signature 218 229 1.1E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PRINTS PR00990 Ribokinase signature 106 119 1.1E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PRINTS PR00990 Ribokinase signature 173 188 1.1E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PRINTS PR00990 Ribokinase signature 7 28 1.1E-30 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03320 9c908c02442c2dce8e4051db9ae743a3 303 PANTHER PTHR10584:SF184 1 302 3.8E-83 T 22-04-2016 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 SUPERFAMILY SSF53383 20 428 2.04E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 PANTHER PTHR11986 2 433 5.2E-150 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 Pfam PF00202 Aminotransferase class-III 20 424 1.4E-103 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 Gene3D G3DSA:3.40.640.10 61 326 1.2E-75 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 PANTHER PTHR11986:SF17 2 433 5.2E-150 T 22-04-2016 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 Gene3D G3DSA:3.90.1150.10 2 60 1.4E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS02665 c55d475263ec4e7f64457e0fe226da71 444 Gene3D G3DSA:3.90.1150.10 328 426 1.4E-32 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 Pfam PF07690 Major Facilitator Superfamily 17 238 2.3E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PANTHER PTHR23504:SF14 1 395 2.0E-87 T 22-04-2016 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 Pfam PF00083 Sugar (and other) transporter 249 395 2.0E-9 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 Gene3D G3DSA:1.20.1250.20 220 396 3.6E-29 T 22-04-2016 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 Gene3D G3DSA:1.20.1250.20 11 197 3.6E-40 T 22-04-2016 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PRINTS PR01035 Tetracycline resistance protein signature 112 133 8.7E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PRINTS PR01035 Tetracycline resistance protein signature 142 164 8.7E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PRINTS PR01035 Tetracycline resistance protein signature 347 370 8.7E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PRINTS PR01035 Tetracycline resistance protein signature 85 109 8.7E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PRINTS PR01035 Tetracycline resistance protein signature 23 39 8.7E-9 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 SUPERFAMILY SSF103473 1 398 6.54E-74 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS05960 3c54a3ebe92b65b60409ac26cfa397f1 402 PANTHER PTHR23504 1 395 2.0E-87 T 22-04-2016 LMES_RS04685 3e393db94f1967af241854749e5d01cb 190 Pfam PF01810 LysE type translocator 16 186 5.6E-19 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LMES_RS04685 3e393db94f1967af241854749e5d01cb 190 PANTHER PTHR30086 1 183 6.1E-28 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LMES_RS07770 b0b81ac72018c5712cc52510539512be 212 Pfam PF01467 Cytidylyltransferase-like 26 182 8.3E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LMES_RS07770 b0b81ac72018c5712cc52510539512be 212 PANTHER PTHR12039 1 209 2.8E-18 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LMES_RS07770 b0b81ac72018c5712cc52510539512be 212 SUPERFAMILY SSF52374 21 208 1.63E-37 T 22-04-2016 LMES_RS07770 b0b81ac72018c5712cc52510539512be 212 Gene3D G3DSA:3.40.50.620 19 208 8.2E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS07770 b0b81ac72018c5712cc52510539512be 212 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 22 208 24.372 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 153 1.2E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 Gene3D G3DSA:2.40.280.10 11 130 5.4E-47 T 22-04-2016 IPR023620 Small protein B LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 66.976 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 PANTHER PTHR30308 1 154 1.4E-69 T 22-04-2016 LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 Pfam PF01668 SmpB protein 12 75 6.7E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 PANTHER PTHR30308:SF2 1 154 1.4E-69 T 22-04-2016 LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 SUPERFAMILY SSF74982 5 135 8.24E-49 T 22-04-2016 IPR023620 Small protein B LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site LMES_RS07705 9972170cdf653188e1b871b4d334858a 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 13 129 4.0E-41 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 LMES_RS08755 cba1ad78ea774544d96086259478de66 335 PANTHER PTHR30336 39 286 1.6E-21 T 22-04-2016 LMES_RS08755 cba1ad78ea774544d96086259478de66 335 Gene3D G3DSA:3.40.50.620 167 292 7.4E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS08755 cba1ad78ea774544d96086259478de66 335 Pfam PF02698 DUF218 domain 167 290 1.7E-22 T 22-04-2016 IPR003848 Domain of unknown function DUF218 LMES_RS05725 421c02c3976259320aeb025a5a56ef45 451 PANTHER PTHR31082 46 436 2.1E-19 T 22-04-2016 LMES_RS05725 421c02c3976259320aeb025a5a56ef45 451 PANTHER PTHR31082:SF6 46 436 2.1E-19 T 22-04-2016 LMES_RS05725 421c02c3976259320aeb025a5a56ef45 451 Pfam PF12821 Threonine/Serine exporter, ThrE 316 440 3.4E-18 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE LMES_RS05725 421c02c3976259320aeb025a5a56ef45 451 Pfam PF06738 Putative threonine/serine exporter 47 290 9.1E-64 T 22-04-2016 IPR010619 Putative threonine/serine exporter LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 Gene3D G3DSA:3.50.50.60 110 302 4.2E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.1E-38 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.1E-38 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.1E-38 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.1E-38 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.1E-38 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PANTHER PTHR22912:SF48 1 308 2.3E-124 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 2.8E-67 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 Gene3D G3DSA:3.50.50.60 6 109 3.8E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 306 4.8E-110 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 PANTHER PTHR22912 1 308 2.3E-124 T 22-04-2016 LMES_RS02880 51a3e76aeb7c2d64f2a86b601456a115 317 SUPERFAMILY SSF51905 5 305 1.25E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 SUPERFAMILY SSF56425 255 403 1.94E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 PANTHER PTHR11632:SF6 3 461 7.6E-135 T 22-04-2016 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 19 455 3.3E-141 T 22-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 SUPERFAMILY SSF51905 402 463 2.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 SUPERFAMILY SSF51905 17 274 2.2E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 Pfam PF00890 FAD binding domain 19 443 5.5E-85 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 Gene3D G3DSA:3.50.50.60 395 463 1.2E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 Gene3D G3DSA:3.50.50.60 13 256 1.2E-92 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 407 429 3.712167E-6 T 22-04-2016 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 3.712167E-6 T 22-04-2016 LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 Gene3D G3DSA:3.90.700.10 257 394 5.2E-35 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LMES_RS00445 dd41eb2121a10c9cab848dcd1256b282 465 PANTHER PTHR11632 3 461 7.6E-135 T 22-04-2016 LMES_RS03515 0c277734f3ace5a52b8999fb0eaa0705 429 PANTHER PTHR10151 175 414 2.3E-36 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family LMES_RS03515 0c277734f3ace5a52b8999fb0eaa0705 429 PANTHER PTHR10151 4 142 2.3E-36 T 22-04-2016 IPR024873 Ectonucleotide pyrophosphatase/phosphodiesterase family LMES_RS03515 0c277734f3ace5a52b8999fb0eaa0705 429 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 7 317 8.6E-51 T 22-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 LMES_RS03515 0c277734f3ace5a52b8999fb0eaa0705 429 Gene3D G3DSA:3.40.720.10 4 297 9.0E-64 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LMES_RS03515 0c277734f3ace5a52b8999fb0eaa0705 429 SUPERFAMILY SSF53649 4 411 2.62E-88 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 Gene3D G3DSA:3.40.50.300 2 224 4.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 PANTHER PTHR24220 5 233 6.9E-107 T 22-04-2016 LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 SMART SM00382 34 220 7.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 PANTHER PTHR24220:SF494 5 233 6.9E-107 T 22-04-2016 LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 Pfam PF00005 ABC transporter 25 172 3.2E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS04025 6ff62f4e4e760602acd0ec8ccb8bad2d 251 SUPERFAMILY SSF52540 3 227 1.33E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 PANTHER PTHR22911:SF41 2 293 1.1E-86 T 22-04-2016 LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 PANTHER PTHR22911 2 293 1.1E-86 T 22-04-2016 LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 Pfam PF00892 EamA-like transporter family 6 145 9.8E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 Pfam PF00892 EamA-like transporter family 156 281 2.9E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 SUPERFAMILY SSF103481 40 147 3.53E-12 T 22-04-2016 LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 SUPERFAMILY SSF103481 191 284 2.09E-10 T 22-04-2016 LMES_RS05805 e45ece85cb88919718b38795c2e316a0 296 TIGRFAM TIGR00688 rarD: protein RarD 7 258 2.4E-59 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 327 7.4E-124 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 SUPERFAMILY SSF51735 4 183 2.86E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 178 4.7E-70 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 Gene3D G3DSA:3.50.50.60 4 38 1.3E-4 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 PANTHER PTHR21371 3 342 2.0E-166 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 2.7E-59 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 SUPERFAMILY SSF48179 184 334 5.27E-63 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 PIRSF PIRSF000116 1 327 3.9E-53 T 22-04-2016 IPR014359 Ketol-acid reductoisomerase, bacteria GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 Gene3D G3DSA:1.10.1040.10 39 326 4.4E-100 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS08845 c9c37e6278eeb157973fe39360150511 347 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 329 43.272 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 PANTHER PTHR22683:SF41 235 777 3.5E-211 T 22-04-2016 LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 Pfam PF01580 FtsK/SpoIIIE family 420 615 2.5E-53 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 PANTHER PTHR22683 235 777 3.5E-211 T 22-04-2016 LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 44 187 1.8E-7 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 Pfam PF09397 Ftsk gamma domain 719 779 4.2E-29 T 22-04-2016 IPR018541 FtsK gamma domain LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 SMART SM00843 717 782 1.0E-37 T 22-04-2016 IPR018541 FtsK gamma domain LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 Gene3D G3DSA:3.40.50.300 391 681 4.4E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 SUPERFAMILY SSF46785 717 780 3.99E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03170 3df49dbd9a02c2752348dfd278a38022 788 SUPERFAMILY SSF52540 390 687 4.78E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 Pfam PF01938 TRAM domain 45 100 2.7E-11 T 22-04-2016 IPR002792 TRAM domain LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 57 485 5.4E-134 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 SUPERFAMILY SSF50249 41 101 1.66E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 PANTHER PTHR11061 20 496 2.0E-191 T 22-04-2016 LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 305 493 3.9E-17 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 Gene3D G3DSA:2.40.50.140 41 117 1.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 Gene3D G3DSA:3.40.50.150 295 492 6.9E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 SUPERFAMILY SSF53335 108 493 1.86E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 PANTHER PTHR11061:SF35 20 496 2.0E-191 T 22-04-2016 LMES_RS00665 2a5fa22d556be156ba13826fe677a167 496 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 425 456 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 PANTHER PTHR10357:SF142 1 432 2.3E-241 T 22-04-2016 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 PANTHER PTHR10357:SF142 464 558 2.3E-241 T 22-04-2016 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 SUPERFAMILY SSF51011 488 558 6.6E-16 T 22-04-2016 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 Gene3D G3DSA:3.20.20.80 6 106 4.3E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 Gene3D G3DSA:3.20.20.80 177 486 4.3E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 Pfam PF11941 Domain of unknown function (DUF3459) 471 549 1.2E-5 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 PANTHER PTHR10357 1 432 2.3E-241 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 PANTHER PTHR10357 464 558 2.3E-241 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 Gene3D G3DSA:2.60.40.1180 489 558 3.7E-21 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 Pfam PF00128 Alpha amylase, catalytic domain 30 382 7.3E-124 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 Gene3D G3DSA:3.90.400.10 107 176 1.1E-31 T 22-04-2016 LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 SUPERFAMILY SSF51445 6 485 4.09E-156 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04305 fd5b0b9897534b852af6f51adc5fa30a 560 SMART SM00642 15 427 3.1E-157 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS05995 e7ab07dc5952551e4a971cfa46daf4ee 127 Pfam PF00075 RNase H 2 82 7.5E-12 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 LMES_RS05995 e7ab07dc5952551e4a971cfa46daf4ee 127 Gene3D G3DSA:3.30.420.10 2 124 5.0E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS05995 e7ab07dc5952551e4a971cfa46daf4ee 127 SUPERFAMILY SSF53098 1 123 5.82E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 SMART SM00535 22 159 1.5E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 Gene3D G3DSA:1.10.1520.10 10 150 7.3E-45 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 SMART SM00358 163 231 4.1E-13 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 PANTHER PTHR11207 12 231 2.4E-59 T 22-04-2016 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 229 1.9E-67 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 SUPERFAMILY SSF69065 7 160 2.09E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 Pfam PF00035 Double-stranded RNA binding motif 164 230 1.3E-12 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 Pfam PF14622 Ribonuclease-III-like 20 150 2.3E-30 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 SUPERFAMILY SSF54768 117 230 1.21E-17 T 22-04-2016 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 ProSitePatterns PS00517 Ribonuclease III family signature. 46 54 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 227 28.172 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 LMES_RS06990 2116b5d4f9abc5431b9d5e1b395a5e46 236 Gene3D G3DSA:3.30.160.20 162 229 1.8E-19 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LMES_RS07285 3356879542c12eebb00cd8c22f2b63bc 363 SUPERFAMILY SSF51445 28 229 4.7E-32 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07285 3356879542c12eebb00cd8c22f2b63bc 363 Pfam PF01183 Glycosyl hydrolases family 25 32 219 3.3E-29 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 LMES_RS07285 3356879542c12eebb00cd8c22f2b63bc 363 SMART SM00641 123 235 1.2E-10 T 22-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup LMES_RS07285 3356879542c12eebb00cd8c22f2b63bc 363 Gene3D G3DSA:3.20.20.80 27 227 1.1E-46 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS08180 66c0d8aa84b1604f8c143776c19315f8 183 Pfam PF04542 Sigma-70 region 2 29 91 6.5E-5 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS08180 66c0d8aa84b1604f8c143776c19315f8 183 SUPERFAMILY SSF88946 7 97 1.48E-10 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS08180 66c0d8aa84b1604f8c143776c19315f8 183 Gene3D G3DSA:1.10.1740.10 11 100 4.9E-7 T 22-04-2016 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 SUPERFAMILY SSF53187 107 281 4.71E-46 T 22-04-2016 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 SUPERFAMILY SSF50044 58 90 2.2E-5 T 22-04-2016 IPR001452 SH3 domain GO:0005515 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 SMART SM00646 169 277 2.3E-15 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 Pfam PF08239 Bacterial SH3 domain 42 91 3.5E-10 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 Gene3D G3DSA:3.40.630.40 108 281 8.9E-50 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 109 277 7.3E-42 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 PANTHER PTHR30032 104 286 3.7E-40 T 22-04-2016 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 PANTHER PTHR30032:SF6 104 286 3.7E-40 T 22-04-2016 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 Gene3D G3DSA:2.30.30.40 56 90 5.4E-5 T 22-04-2016 LMES_RS05545 5505f4ae838dbd98410ced1ab825b87b 287 SMART SM00287 32 96 5.0E-7 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 SUPERFAMILY SSF56024 112 309 1.35E-35 T 22-04-2016 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 Gene3D G3DSA:3.30.870.10 320 460 2.0E-29 T 22-04-2016 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 Gene3D G3DSA:3.30.870.10 112 310 2.1E-39 T 22-04-2016 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 SUPERFAMILY SSF56024 268 463 2.02E-35 T 22-04-2016 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 16 481 8.5E-99 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 PANTHER PTHR21248 22 481 1.8E-89 T 22-04-2016 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 Pfam PF13091 PLD-like domain 322 448 6.1E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 Pfam PF13091 PLD-like domain 139 263 1.4E-10 T 22-04-2016 IPR025202 Phospholipase D-like domain LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 PANTHER PTHR21248:SF5 22 481 1.8E-89 T 22-04-2016 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 Pfam PF13396 Phospholipase_D-nuclease N-terminal 26 63 6.3E-9 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 SMART SM00155 216 243 1.9E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LMES_RS04820 de8b5fe2e542a3f597355e692a4b328c 481 SMART SM00155 395 422 1.3E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 ProSitePatterns PS00455 Putative AMP-binding domain signature. 140 151 - T 22-04-2016 IPR020845 AMP-binding, conserved site LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Pfam PF13193 AMP-binding enzyme C-terminal domain 390 462 4.9E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 1 471 39.66 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Gene3D G3DSA:2.30.38.10 305 374 4.0E-18 T 22-04-2016 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Gene3D G3DSA:3.30.300.30 377 466 1.0E-20 T 22-04-2016 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Gene3D G3DSA:3.40.50.980 3 149 1.0E-25 T 22-04-2016 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 26 466 3.1E-121 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 PANTHER PTHR24096:SF179 1 466 1.8E-142 T 22-04-2016 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 SUPERFAMILY SSF56801 3 472 6.67E-111 T 22-04-2016 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 PANTHER PTHR24096 1 466 1.8E-142 T 22-04-2016 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Pfam PF00501 AMP-binding enzyme 7 381 1.9E-73 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LMES_RS09155 4fad7ed70d1ef1563e6efe09ad236be7 479 Gene3D G3DSA:3.40.50.980 150 304 8.1E-35 T 22-04-2016 LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 SMART SM00849 18 196 0.002 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 PANTHER PTHR12553 184 309 1.0E-81 T 22-04-2016 LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 PANTHER PTHR12553 1 153 1.0E-81 T 22-04-2016 LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 Gene3D G3DSA:3.60.15.10 4 309 2.9E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 Pfam PF00753 Metallo-beta-lactamase superfamily 18 80 2.3E-8 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 SUPERFAMILY SSF56281 1 308 1.62E-78 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 308 3.4E-108 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LMES_RS06510 b1684f463fabdb21ba633761109736e7 318 Hamap MF_01818 Ribonuclease BN [rbn]. 1 308 39.778 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 5 60 1.0E-13 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 Pfam PF01192 RNA polymerase Rpb6 9 60 1.7E-12 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 63 14.538 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 SMART SM01409 9 62 6.3E-13 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 SUPERFAMILY SSF63562 2 69 1.05E-21 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 PANTHER PTHR34476 3 70 1.9E-16 T 22-04-2016 LMES_RS07640 c39493fc9d255d9c5e186850f57174a2 70 Gene3D G3DSA:3.90.940.10 2 68 9.5E-23 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LMES_RS02550 fe98c82974b7fbee9bdd6c706797b3e1 361 PANTHER PTHR41771 11 356 4.2E-25 T 22-04-2016 LMES_RS02550 fe98c82974b7fbee9bdd6c706797b3e1 361 PANTHER PTHR41771:SF1 11 356 4.2E-25 T 22-04-2016 LMES_RS02550 fe98c82974b7fbee9bdd6c706797b3e1 361 Pfam PF07907 YibE/F-like protein 119 351 1.6E-59 T 22-04-2016 IPR012507 YibE/F-like LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 PANTHER PTHR30290 1 544 3.5E-131 T 22-04-2016 LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 PANTHER PTHR30290:SF10 1 544 3.5E-131 T 22-04-2016 LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 Gene3D G3DSA:3.10.105.10 306 514 1.7E-42 T 22-04-2016 LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 Gene3D G3DSA:3.40.190.10 177 305 1.3E-35 T 22-04-2016 LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 PIRSF PIRSF002741 8 544 5.5E-85 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 464 2.1E-73 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 SUPERFAMILY SSF53850 31 536 5.0E-111 T 22-04-2016 LMES_RS08720 7c5cec498e98164c2c77792fe6fac6b2 544 Gene3D G3DSA:3.90.76.10 69 176 2.1E-34 T 22-04-2016 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 SUPERFAMILY SSF47413 2 50 2.25E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 SUPERFAMILY SSF53822 75 315 7.92E-33 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 PANTHER PTHR30146 1 332 3.8E-50 T 22-04-2016 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.8E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 Pfam PF13377 Periplasmic binding protein-like domain 167 332 9.0E-23 T 22-04-2016 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 Gene3D G3DSA:1.10.260.40 1 48 9.8E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 Gene3D G3DSA:3.40.50.2300 114 175 5.0E-7 T 22-04-2016 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 Gene3D G3DSA:3.40.50.2300 176 309 7.2E-30 T 22-04-2016 LMES_RS04225 1f8b8ab1cdfb7d9606a62bebe1e14a88 335 SMART SM00354 1 69 1.7E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS03950 0ceaef486883e0dd4aac54377bc911b9 319 Gene3D G3DSA:3.75.10.10 1 317 4.6E-79 T 22-04-2016 LMES_RS03950 0ceaef486883e0dd4aac54377bc911b9 319 SUPERFAMILY SSF55909 2 316 1.07E-53 T 22-04-2016 LMES_RS03950 0ceaef486883e0dd4aac54377bc911b9 319 Pfam PF02274 Amidinotransferase 60 315 5.3E-29 T 22-04-2016 LMES_RS03950 0ceaef486883e0dd4aac54377bc911b9 319 PANTHER PTHR12737 125 319 4.1E-22 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 PANTHER PTHR18895:SF60 1 183 3.7E-42 T 22-04-2016 LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 Pfam PF03602 Conserved hypothetical protein 95 1 181 1.7E-57 T 22-04-2016 LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 PIRSF PIRSF004553 1 184 1.3E-50 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 SUPERFAMILY SSF53335 1 181 1.65E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 Gene3D G3DSA:3.40.50.150 1 182 3.4E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 PANTHER PTHR18895 1 183 3.7E-42 T 22-04-2016 LMES_RS07120 37693ff9669399e8ef9661568701aaea 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 7.9E-50 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Pfam PF02875 Mur ligase family, glutamate ligase domain 300 377 2.3E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Gene3D G3DSA:3.40.1190.10 82 296 2.4E-61 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Pfam PF01225 Mur ligase family, catalytic domain 23 80 2.0E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 SUPERFAMILY SSF53244 299 440 2.27E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 PANTHER PTHR23135:SF3 10 440 3.1E-138 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 SUPERFAMILY SSF53623 99 296 7.85E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Gene3D G3DSA:3.90.190.20 299 441 4.2E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 SUPERFAMILY SSF63418 2 96 7.85E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 441 32.401 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Pfam PF08245 Mur ligase middle domain 105 278 4.5E-46 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 Gene3D G3DSA:3.40.1390.10 1 79 1.4E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 440 5.1E-120 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02155 b77e0e287f168eaa1b9a4221ba301ebe 442 PANTHER PTHR23135 10 440 3.1E-138 T 22-04-2016 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 4 295 1.8E-69 T 22-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 SUPERFAMILY SSF53098 90 300 9.56E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 PIRSF PIRSF037748 1 303 2.0E-97 T 22-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 Pfam PF11858 Domain of unknown function (DUF3378) 3 76 5.9E-23 T 22-04-2016 IPR024568 Ribonuclease HIII, N-terminal LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 PANTHER PTHR10954 11 303 3.0E-83 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 PANTHER PTHR10954:SF12 11 303 3.0E-83 T 22-04-2016 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 Gene3D G3DSA:3.30.420.10 91 256 3.2E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 303 29.884 T 22-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 LMES_RS07685 4d3275b41f6ee69e385be1c730f1b466 303 Pfam PF01351 Ribonuclease HII 92 296 2.0E-39 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 195 205 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 TIGRFAM TIGR00067 glut_race: glutamate racemase 20 269 4.5E-77 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 Hamap MF_00258 Glutamate racemase [murI]. 18 272 38.156 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 PANTHER PTHR21198:SF2 11 282 8.4E-100 T 22-04-2016 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 SUPERFAMILY SSF53681 19 121 3.92E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 PANTHER PTHR21198 11 282 8.4E-100 T 22-04-2016 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 SUPERFAMILY SSF53681 124 274 1.16E-37 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 Pfam PF01177 Asp/Glu/Hydantoin racemase 20 227 1.5E-35 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 Gene3D G3DSA:3.40.50.1860 16 187 8.7E-58 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS02925 634d76635b0786c8b2ee60caa901fb5f 291 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 85 93 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 PANTHER PTHR24220:SF578 3 225 1.7E-98 T 22-04-2016 LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 SUPERFAMILY SSF52540 1 221 1.92E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 SMART SM00382 30 223 3.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 Pfam PF00005 ABC transporter 21 169 9.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 Gene3D G3DSA:3.40.50.300 1 226 8.7E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS09305 b84cd91189553e18d035e89c7cc61e16 229 PANTHER PTHR24220 3 225 1.7E-98 T 22-04-2016 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Pfam PF11798 IMS family HHH motif 176 206 5.1E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Hamap MF_01113 DNA polymerase IV [dinB]. 10 360 33.76 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 PANTHER PTHR11076 10 361 2.3E-115 T 22-04-2016 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Gene3D G3DSA:3.30.1490.100 250 357 9.9E-25 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Pfam PF11799 impB/mucB/samB family C-terminal domain 246 352 3.1E-15 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Gene3D G3DSA:1.10.150.20 175 244 2.3E-16 T 22-04-2016 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Gene3D G3DSA:3.30.70.270 79 173 2.1E-29 T 22-04-2016 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 SUPERFAMILY SSF100879 251 360 6.54E-20 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 SUPERFAMILY SSF56672 9 239 7.74E-82 T 22-04-2016 LMES_RS07090 5e540fe54ac9b3f6ba61fd71de903dd0 361 Pfam PF00817 impB/mucB/samB family 16 163 1.6E-43 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 Gene3D G3DSA:3.40.50.1110 43 229 4.7E-46 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 Gene3D G3DSA:3.40.50.1110 265 296 4.7E-46 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 PANTHER PTHR30383 45 127 1.8E-15 T 22-04-2016 LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 PANTHER PTHR30383 146 222 1.8E-15 T 22-04-2016 LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 49 281 2.0E-23 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 SUPERFAMILY SSF52266 44 220 1.31E-33 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03655 49ef5e8d0f46e05ebb7017e8f49ed34d 303 SUPERFAMILY SSF52266 255 295 1.31E-33 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 PANTHER PTHR11807 1 399 1.4E-56 T 22-04-2016 LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 Pfam PF01171 PP-loop family 18 188 2.6E-51 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 Gene3D G3DSA:3.40.50.620 5 168 1.7E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 SUPERFAMILY SSF52402 4 220 2.87E-49 T 22-04-2016 LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 PANTHER PTHR11807:SF2 1 399 1.4E-56 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 287 22.692 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 18 192 1.1E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 349 390 4.9E-6 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LMES_RS01905 70423653b258dfe6bbdd7b1a1c522d2a 430 SMART SM00977 349 425 8.8E-10 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 SUPERFAMILY SSF75420 2 88 8.89E-21 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 Gene3D G3DSA:2.30.30.180 99 154 6.0E-8 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 Gene3D G3DSA:3.30.300.70 3 85 2.8E-21 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 SUPERFAMILY SSF74942 89 158 1.7E-10 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 PANTHER PTHR33867 1 158 2.6E-30 T 22-04-2016 LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 Pfam PF02576 Putative ribosome maturation factor RimP 12 153 8.4E-29 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 158 19.491 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 LMES_RS05915 a6057f7b3b8b52a01d996f842c219424 158 PANTHER PTHR33867:SF1 1 158 2.6E-30 T 22-04-2016 LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 SUPERFAMILY SSF54637 3 144 1.16E-37 T 22-04-2016 IPR029069 HotDog domain LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 PANTHER PTHR31727:SF6 51 230 2.1E-22 T 22-04-2016 LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 PANTHER PTHR31727 51 230 2.1E-22 T 22-04-2016 LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 Pfam PF01643 Acyl-ACP thioesterase 2 242 1.7E-56 T 22-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 SUPERFAMILY SSF54637 148 241 4.98E-20 T 22-04-2016 IPR029069 HotDog domain LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 Gene3D G3DSA:3.10.129.10 2 142 2.9E-31 T 22-04-2016 IPR029069 HotDog domain LMES_RS01315 617daa7331d9a21ea8abcc4b79a7fa98 243 Gene3D G3DSA:3.10.129.10 149 241 2.2E-20 T 22-04-2016 IPR029069 HotDog domain LMES_RS05425 cd20a8a0374e5f90d5bc929a7fb83c79 336 Pfam PF13145 PPIC-type PPIASE domain 126 237 8.2E-10 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LMES_RS05425 cd20a8a0374e5f90d5bc929a7fb83c79 336 SUPERFAMILY SSF109998 36 165 5.49E-14 T 22-04-2016 IPR027304 Trigger factor/SurA domain LMES_RS05425 cd20a8a0374e5f90d5bc929a7fb83c79 336 Gene3D G3DSA:3.10.50.40 148 252 2.9E-14 T 22-04-2016 LMES_RS05425 cd20a8a0374e5f90d5bc929a7fb83c79 336 Hamap MF_01145 Foldase protein PrsA [prsA]. 4 294 16.764 T 22-04-2016 IPR023059 Foldase protein PrsA GO:0003755 LMES_RS05425 cd20a8a0374e5f90d5bc929a7fb83c79 336 SUPERFAMILY SSF54534 143 234 4.71E-10 T 22-04-2016 LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 65 4.4E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 215 4.4E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 135 4.4E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 186 4.4E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 252 272 4.4E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 234 4.4E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 Gene3D G3DSA:3.40.50.720 43 288 1.8E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 SUPERFAMILY SSF51735 45 288 1.5E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 183 211 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 56 288 4.0E-55 T 22-04-2016 LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PANTHER PTHR24322:SF564 51 180 4.5E-51 T 22-04-2016 LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PANTHER PTHR24322:SF564 196 228 4.5E-51 T 22-04-2016 LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PANTHER PTHR24322 51 180 4.5E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04140 d7a701daf28086dc4354864079f8aca6 289 PANTHER PTHR24322 196 228 4.5E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS08130 f1aa63f94d9dc105932d2a27edf07334 121 Gene3D G3DSA:2.30.30.110 8 120 2.1E-40 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor LMES_RS08130 f1aa63f94d9dc105932d2a27edf07334 121 PANTHER PTHR33988:SF2 3 121 1.6E-42 T 22-04-2016 LMES_RS08130 f1aa63f94d9dc105932d2a27edf07334 121 SUPERFAMILY SSF50118 9 120 8.5E-34 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor LMES_RS08130 f1aa63f94d9dc105932d2a27edf07334 121 PANTHER PTHR33988 3 121 1.6E-42 T 22-04-2016 LMES_RS08130 f1aa63f94d9dc105932d2a27edf07334 121 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 10 117 4.3E-29 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 LMES_RS08130 f1aa63f94d9dc105932d2a27edf07334 121 PIRSF PIRSF033490 6 120 1.3E-31 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 LMES_RS04680 16b5ede7161b7fe80e944ffed78150c0 154 PANTHER PTHR30411:SF6 1 154 7.7E-52 T 22-04-2016 LMES_RS04680 16b5ede7161b7fe80e944ffed78150c0 154 Pfam PF04073 Aminoacyl-tRNA editing domain 27 141 7.8E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS04680 16b5ede7161b7fe80e944ffed78150c0 154 SUPERFAMILY SSF55826 1 151 7.06E-33 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS04680 16b5ede7161b7fe80e944ffed78150c0 154 PANTHER PTHR30411 1 154 7.7E-52 T 22-04-2016 LMES_RS04680 16b5ede7161b7fe80e944ffed78150c0 154 Gene3D G3DSA:3.90.960.10 1 152 4.1E-35 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 SUPERFAMILY SSF55068 3 154 3.66E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 Pfam PF01625 Peptide methionine sulfoxide reductase 5 154 2.5E-59 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 154 1.7E-60 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 PANTHER PTHR10173:SF6 2 153 2.2E-64 T 22-04-2016 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 PANTHER PTHR10173 2 153 2.2E-64 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 Gene3D G3DSA:3.30.1060.10 3 154 4.9E-68 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LMES_RS06515 0763b89637a612dd62e53babe21c609f 171 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 35.043 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 292 83.674 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 SUPERFAMILY SSF56194 188 291 5.89E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 Gene3D G3DSA:3.30.465.10 82 217 1.1E-44 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 191 288 5.4E-26 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 14 290 8.4E-67 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 Gene3D G3DSA:3.30.43.10 3 78 2.1E-16 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 PANTHER PTHR21071:SF4 1 292 2.8E-99 T 22-04-2016 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 SUPERFAMILY SSF56176 5 185 3.32E-43 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 Pfam PF01565 FAD binding domain 27 154 2.4E-20 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 PANTHER PTHR21071 1 292 2.8E-99 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS07015 03a839baeba30aadcd2f9592dbe8a37c 292 Gene3D G3DSA:3.90.78.10 218 291 3.7E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 Gene3D G3DSA:3.40.50.1360 3 139 3.1E-55 T 22-04-2016 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 222 32.0 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 PANTHER PTHR11934 1 228 3.1E-80 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 Gene3D G3DSA:3.30.70.260 140 202 4.2E-20 T 22-04-2016 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 218 6.1E-57 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 SUPERFAMILY SSF100950 2 145 4.19E-42 T 22-04-2016 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 SUPERFAMILY SSF75445 127 205 3.53E-19 T 22-04-2016 LMES_RS03020 79e876006cdf9ccb411df7e1e404b460 229 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 219 3.9E-78 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 Pfam PF00005 ABC transporter 55 204 1.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 SUPERFAMILY SSF52540 30 268 1.11E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 PANTHER PTHR24220:SF585 37 278 1.7E-112 T 22-04-2016 LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 36 280 2.6E-109 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 PANTHER PTHR24220 37 278 1.7E-112 T 22-04-2016 LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 SMART SM00382 60 268 1.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 ProSitePatterns PS00211 ABC transporters family signature. 177 191 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02840 9ae292674b0f04fb6a82b9b1486066af 280 Gene3D G3DSA:3.40.50.300 27 271 1.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Gene3D G3DSA:3.40.50.300 88 271 9.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 PANTHER PTHR11638 87 705 0.0 T 22-04-2016 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 PANTHER PTHR11638:SF101 87 705 0.0 T 22-04-2016 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 568 582 3.6E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 460 478 3.6E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 505 523 3.6E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 3.6E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Gene3D G3DSA:3.40.50.300 413 629 3.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 SUPERFAMILY SSF52540 405 684 9.15E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 SMART SM00382 125 272 8.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 SMART SM00382 456 619 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Gene3D G3DSA:1.10.8.60 630 711 6.6E-26 T 22-04-2016 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 SMART SM01086 618 705 1.5E-28 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Pfam PF02151 UvrB/uvrC motif 343 377 1.5E-4 T 22-04-2016 IPR001943 UVR domain GO:0005515 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 130 262 2.6E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Pfam PF07724 AAA domain (Cdc48 subfamily) 455 610 4.2E-40 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 SUPERFAMILY SSF52540 87 354 5.49E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 618 689 5.0E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal LMES_RS00680 d6bdaa50a65c28cba1522b9b89a42fe9 716 Gene3D G3DSA:1.10.8.60 273 354 1.4E-23 T 22-04-2016 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 297 1.0E-22 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 Gene3D G3DSA:3.40.366.10 194 295 4.0E-58 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 Gene3D G3DSA:3.40.366.10 2 118 4.0E-58 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 Pfam PF00698 Acyl transferase domain 6 290 7.0E-34 T 22-04-2016 IPR014043 Acyl transferase LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 SUPERFAMILY SSF55048 124 194 2.22E-11 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 PANTHER PTHR10982 1 312 6.9E-85 T 22-04-2016 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 SUPERFAMILY SSF52151 187 307 1.05E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 SUPERFAMILY SSF52151 3 118 1.05E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 Gene3D G3DSA:3.30.70.250 123 193 5.0E-20 T 22-04-2016 LMES_RS01460 37abebdc0fc44fa0846d178c4feb30f7 312 PIRSF PIRSF000446 1 308 9.8E-71 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 Pfam PF05175 Methyltransferase small domain 162 245 1.7E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 PANTHER PTHR18895 69 330 1.1E-67 T 22-04-2016 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 50 326 1.5E-59 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 75 326 6.2E-78 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 SUPERFAMILY SSF53335 51 324 9.58E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 Gene3D G3DSA:3.40.50.150 137 328 3.1E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 Gene3D G3DSA:1.10.8.10 52 135 4.6E-10 T 22-04-2016 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 233 239 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 PANTHER PTHR18895:SF64 69 330 1.1E-67 T 22-04-2016 LMES_RS07995 73bae7e1b546293fc90103facbf26fef 330 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 50 330 36.98 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 Pfam PF13377 Periplasmic binding protein-like domain 174 333 2.5E-26 T 22-04-2016 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 SUPERFAMILY SSF53822 66 334 4.91E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.7E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 Gene3D G3DSA:1.10.260.40 7 58 4.0E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 TIGRFAM TIGR01481 ccpA: catabolite control protein A 5 333 4.1E-136 T 22-04-2016 IPR006377 Catabolite control protein A GO:0006355 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 Gene3D G3DSA:3.40.50.2300 178 314 7.3E-37 T 22-04-2016 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 SMART SM00354 6 76 9.6E-35 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 5.1E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 5.1E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 Gene3D G3DSA:3.40.50.2300 59 177 4.2E-47 T 22-04-2016 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 SUPERFAMILY SSF47413 6 64 9.15E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 PANTHER PTHR30146:SF4 6 334 4.0E-111 T 22-04-2016 LMES_RS02610 23f819cd0845d15038f2a152e72cd167 335 PANTHER PTHR30146 6 334 4.0E-111 T 22-04-2016 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 4 355 2.5E-151 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 Gene3D G3DSA:1.20.58.410 8 92 4.2E-19 T 22-04-2016 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 SMART SM00937 62 177 1.7E-58 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 PANTHER PTHR11075:SF9 2 354 2.1E-163 T 22-04-2016 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 Pfam PF03462 PCRF domain 13 202 7.3E-72 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 Gene3D G3DSA:3.30.160.20 210 287 1.1E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 PANTHER PTHR11075 2 354 2.1E-163 T 22-04-2016 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 SUPERFAMILY SSF75620 12 351 3.01E-127 T 22-04-2016 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 355 38.006 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LMES_RS08000 ceba4b59384df9ae172a2ef9bc7b1635 356 Pfam PF00472 RF-1 domain 210 319 1.8E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 Pfam PF00459 Inositol monophosphatase family 33 258 1.8E-36 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 67 83 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 45 65 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 89 102 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 Gene3D G3DSA:3.30.540.10 11 162 1.1E-32 T 22-04-2016 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 PANTHER PTHR20854 3 259 5.0E-39 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 Gene3D G3DSA:3.40.190.80 176 260 2.3E-16 T 22-04-2016 LMES_RS05835 c873881863e3e136484bfa9b826377a2 262 SUPERFAMILY SSF56655 14 259 1.2E-52 T 22-04-2016 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 PANTHER PTHR21600:SF2 1 244 1.8E-76 T 22-04-2016 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 SUPERFAMILY SSF55120 63 238 1.1E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 PANTHER PTHR21600 1 244 1.8E-76 T 22-04-2016 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 231 7.6E-52 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 Pfam PF01479 S4 domain 6 52 2.4E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 SMART SM00363 6 69 5.3E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 Gene3D G3DSA:3.10.290.10 5 67 2.3E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 Pfam PF00849 RNA pseudouridylate synthase 67 200 2.5E-23 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS05625 82dbc2879fb3603d904605677e8db8ae 249 SUPERFAMILY SSF55174 4 70 8.05E-16 T 22-04-2016 LMES_RS05185 07a9c5771ce3f1a54d3055007ccbc928 90 SUPERFAMILY SSF55021 3 84 2.4E-22 T 22-04-2016 LMES_RS05185 07a9c5771ce3f1a54d3055007ccbc928 90 Hamap MF_01054 UPF0237 protein . 2 90 24.692 T 22-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type LMES_RS05185 07a9c5771ce3f1a54d3055007ccbc928 90 PANTHER PTHR34875 1 90 1.2E-23 T 22-04-2016 LMES_RS05185 07a9c5771ce3f1a54d3055007ccbc928 90 Pfam PF13740 ACT domain 5 77 1.4E-15 T 22-04-2016 LMES_RS05185 07a9c5771ce3f1a54d3055007ccbc928 90 Gene3D G3DSA:3.30.70.260 1 90 2.4E-31 T 22-04-2016 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 Gene3D G3DSA:3.90.180.10 1 169 4.2E-46 T 22-04-2016 IPR011032 GroES-like LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 SUPERFAMILY SSF51735 143 311 2.55E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 PANTHER PTHR11695:SF38 113 349 2.8E-100 T 22-04-2016 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 PANTHER PTHR11695:SF38 12 96 2.8E-100 T 22-04-2016 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 Gene3D G3DSA:3.40.50.720 170 288 2.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 Pfam PF00107 Zinc-binding dehydrogenase 178 306 5.1E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 PANTHER PTHR11695 113 349 2.8E-100 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 PANTHER PTHR11695 12 96 2.8E-100 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 137 8.7E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 SUPERFAMILY SSF50129 1 177 9.43E-44 T 22-04-2016 IPR011032 GroES-like LMES_RS04400 6294477ce38f9e5304f5cf084f200b61 349 SMART SM00829 8 344 2.2E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 SUPERFAMILY SSF51971 155 414 1.35E-56 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 Gene3D G3DSA:1.10.1060.10 3 157 2.3E-31 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 Gene3D G3DSA:3.50.50.60 158 255 2.6E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 PANTHER PTHR11938:SF75 10 470 7.4E-104 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 143 1.4E-15 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 Gene3D G3DSA:3.50.50.60 256 402 1.4E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 SUPERFAMILY SSF46548 5 167 3.19E-27 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 PANTHER PTHR11938 10 470 7.4E-104 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 157 458 1.7E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 PRINTS PR00419 Adrenodoxin reductase family signature 158 180 9.4E-22 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 PRINTS PR00419 Adrenodoxin reductase family signature 298 312 9.4E-22 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 PRINTS PR00419 Adrenodoxin reductase family signature 223 233 9.4E-22 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 PRINTS PR00419 Adrenodoxin reductase family signature 181 194 9.4E-22 T 22-04-2016 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 Gene3D G3DSA:3.40.50.720 403 473 9.9E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 472 6.1E-144 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 LMES_RS03940 2e937e8420c1091f420b0dadc291dd87 484 SUPERFAMILY SSF51971 390 465 4.0E-5 T 22-04-2016 LMES_RS05870 076926b999b48616169695dd7d175a36 316 SUPERFAMILY SSF52374 23 180 2.82E-23 T 22-04-2016 LMES_RS05870 076926b999b48616169695dd7d175a36 316 Gene3D G3DSA:2.40.30.30 185 314 5.7E-37 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 LMES_RS05870 076926b999b48616169695dd7d175a36 316 Gene3D G3DSA:3.40.50.620 19 184 9.0E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS05870 076926b999b48616169695dd7d175a36 316 PANTHER PTHR22749 1 312 5.6E-97 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 LMES_RS05870 076926b999b48616169695dd7d175a36 316 SMART SM00904 188 313 1.5E-52 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LMES_RS05870 076926b999b48616169695dd7d175a36 316 PANTHER PTHR22749:SF3 1 312 5.6E-97 T 22-04-2016 LMES_RS05870 076926b999b48616169695dd7d175a36 316 Pfam PF06574 FAD synthetase 18 171 5.9E-42 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LMES_RS05870 076926b999b48616169695dd7d175a36 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 24 313 2.4E-71 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LMES_RS05870 076926b999b48616169695dd7d175a36 316 PIRSF PIRSF004491 7 316 6.6E-89 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LMES_RS05870 076926b999b48616169695dd7d175a36 316 SUPERFAMILY SSF82114 179 313 2.4E-41 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LMES_RS05870 076926b999b48616169695dd7d175a36 316 Pfam PF01687 Riboflavin kinase 190 312 2.0E-31 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 PANTHER PTHR11751:SF306 4 376 1.8E-123 T 22-04-2016 LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 Gene3D G3DSA:3.90.1150.10 254 378 1.1E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 Pfam PF00155 Aminotransferase class I and II 14 368 2.3E-73 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 216 229 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 PANTHER PTHR11751 4 376 1.8E-123 T 22-04-2016 LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 SUPERFAMILY SSF53383 6 376 3.67E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS06030 976ad0cfc751a36bc6da005525a2fe85 379 Gene3D G3DSA:3.40.640.10 27 253 3.8E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 SUPERFAMILY SSF46992 4 83 4.19E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 83 12.037 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 Pfam PF01649 Ribosomal protein S20 4 83 6.0E-23 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 PANTHER PTHR33398 1 83 3.9E-24 T 22-04-2016 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 79 1.0E-16 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 Gene3D G3DSA:1.20.58.110 1 83 9.1E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS07075 7e33d96b6ee0c3e845808087708083f6 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 83 1.4E-18 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 SMART SM00342 223 306 5.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 Gene3D G3DSA:1.10.10.60 262 307 2.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 Pfam PF12833 Helix-turn-helix domain 229 307 3.4E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 PANTHER PTHR11019:SF141 36 310 3.2E-20 T 22-04-2016 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 Gene3D G3DSA:1.10.10.60 210 261 4.0E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 SUPERFAMILY SSF46689 207 256 3.37E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 PANTHER PTHR11019 36 310 3.2E-20 T 22-04-2016 LMES_RS05040 7eba1d68ab75ba23c5d811abbd4e5610 311 SUPERFAMILY SSF46689 260 307 7.53E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 PANTHER PTHR11670:SF27 1 193 2.4E-82 T 22-04-2016 LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 SUPERFAMILY SSF52016 2 191 2.94E-51 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 Pfam PF00694 Aconitase C-terminal domain 1 123 1.7E-29 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 PANTHER PTHR11670 1 193 2.4E-82 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 182 4.2E-58 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 Gene3D G3DSA:3.20.19.10 2 190 1.6E-38 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LMES_RS09195 286b36a387371d6e6f76fb69f38ad713 194 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 194 37.908 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 176 5.5E-42 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 542 3.7E-41 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 Gene3D G3DSA:3.40.50.1220 190 340 2.4E-31 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 SUPERFAMILY SSF52518 371 550 3.87E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 Gene3D G3DSA:3.40.50.970 365 551 4.1E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 7 553 3.6E-266 T 22-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 SUPERFAMILY SSF52467 190 357 5.14E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 PANTHER PTHR18968:SF129 7 557 2.3E-242 T 22-04-2016 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 SUPERFAMILY SSF52518 5 182 5.44E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 332 3.3E-26 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 Gene3D G3DSA:3.40.50.970 4 183 4.3E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS02495 4211dae98c7b7dc98c992122efff9b42 561 PANTHER PTHR18968 7 557 2.3E-242 T 22-04-2016 LMES_RS02830 48763d3a3d8797f063f865968df4c4af 307 PANTHER PTHR30425:SF6 2 307 5.9E-135 T 22-04-2016 LMES_RS02830 48763d3a3d8797f063f865968df4c4af 307 Gene3D G3DSA:1.10.3720.10 24 304 9.0E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02830 48763d3a3d8797f063f865968df4c4af 307 PANTHER PTHR30425 2 307 5.9E-135 T 22-04-2016 LMES_RS02830 48763d3a3d8797f063f865968df4c4af 307 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 20 303 1.5E-82 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 LMES_RS02830 48763d3a3d8797f063f865968df4c4af 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 303 1.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02830 48763d3a3d8797f063f865968df4c4af 307 SUPERFAMILY SSF161098 35 297 1.83E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 PANTHER PTHR33516:SF2 1 211 1.4E-77 T 22-04-2016 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 Hamap MF_00015 LexA repressor [lexA]. 4 210 30.423 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 Pfam PF01726 LexA DNA binding domain 8 66 1.4E-18 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 TIGRFAM TIGR00498 lexA: repressor LexA 8 209 1.3E-60 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 Gene3D G3DSA:1.10.10.10 7 71 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 SUPERFAMILY SSF46785 7 67 1.29E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 Pfam PF00717 Peptidase S24-like 129 194 7.8E-17 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 Gene3D G3DSA:2.10.109.10 87 209 5.9E-40 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 SUPERFAMILY SSF51306 87 208 8.89E-33 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 5.5E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 5.5E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 165 177 5.5E-9 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LMES_RS05300 3ddd38b8ebf0d3cde83125750572de91 212 PANTHER PTHR33516 1 211 1.4E-77 T 22-04-2016 LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 Gene3D G3DSA:3.40.50.620 1 143 1.5E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 PRINTS PR01438 Universal stress protein signature 103 115 8.4E-15 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 PRINTS PR01438 Universal stress protein signature 2 20 8.4E-15 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 PRINTS PR01438 Universal stress protein signature 121 143 8.4E-15 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 SUPERFAMILY SSF52402 3 143 5.53E-31 T 22-04-2016 LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 PANTHER PTHR31964 1 143 1.6E-24 T 22-04-2016 LMES_RS03925 6b30b69f8484e8a180f1350557e7fb65 143 Pfam PF00582 Universal stress protein family 1 143 7.1E-24 T 22-04-2016 IPR006016 UspA GO:0006950 LMES_RS08715 ad98253ac0f945c29031ec38d900c1f8 305 SUPERFAMILY SSF161098 90 291 1.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08715 ad98253ac0f945c29031ec38d900c1f8 305 PANTHER PTHR30465 1 304 3.0E-125 T 22-04-2016 LMES_RS08715 ad98253ac0f945c29031ec38d900c1f8 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 303 2.4E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS08715 ad98253ac0f945c29031ec38d900c1f8 305 PANTHER PTHR30465:SF74 1 304 3.0E-125 T 22-04-2016 LMES_RS08715 ad98253ac0f945c29031ec38d900c1f8 305 Gene3D G3DSA:1.10.3720.10 89 300 6.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00070 a6f2f119b1a8fdfbaa559835340bc4a6 345 Pfam PF15432 Accessory Sec secretory system ASP3 16 140 9.1E-33 T 22-04-2016 IPR022259 Accessory Sec system protein Asp3 GO:0015031 LMES_RS00070 a6f2f119b1a8fdfbaa559835340bc4a6 345 TIGRFAM TIGR03711 acc_sec_asp3: accessory Sec system protein Asp3 3 139 1.3E-48 T 22-04-2016 IPR022259 Accessory Sec system protein Asp3 GO:0015031 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 Pfam PF13365 Trypsin-like peptidase domain 88 234 1.1E-29 T 22-04-2016 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 Gene3D G3DSA:2.40.10.10 163 278 9.5E-42 T 22-04-2016 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 Gene3D G3DSA:2.30.42.10 279 375 2.8E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 SUPERFAMILY SSF50494 58 273 1.11E-54 T 22-04-2016 IPR009003 Peptidase S1, PA clan LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PANTHER PTHR22939 9 375 1.1E-103 T 22-04-2016 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 3.2E-36 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PRINTS PR00834 HtrA/DegQ protease family signature 121 141 3.2E-36 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PRINTS PR00834 HtrA/DegQ protease family signature 322 334 3.2E-36 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PRINTS PR00834 HtrA/DegQ protease family signature 227 244 3.2E-36 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PRINTS PR00834 HtrA/DegQ protease family signature 100 112 3.2E-36 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PRINTS PR00834 HtrA/DegQ protease family signature 162 186 3.2E-36 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 SMART SM00228 276 364 3.1E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 Pfam PF13180 PDZ domain 276 373 7.3E-24 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 PANTHER PTHR22939:SF79 9 375 1.1E-103 T 22-04-2016 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 Gene3D G3DSA:2.40.10.10 82 162 1.1E-27 T 22-04-2016 LMES_RS08790 5592e85c677d56dafede7847669aabfb 379 SUPERFAMILY SSF50156 262 373 8.81E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS02715 e10bac0d33c94c814dc3744fecbf4880 165 PANTHER PTHR13256:SF21 1 164 1.3E-54 T 22-04-2016 LMES_RS02715 e10bac0d33c94c814dc3744fecbf4880 165 Gene3D G3DSA:3.40.630.30 2 163 5.3E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS02715 e10bac0d33c94c814dc3744fecbf4880 165 Pfam PF13302 Acetyltransferase (GNAT) domain 3 134 7.8E-22 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS02715 e10bac0d33c94c814dc3744fecbf4880 165 SUPERFAMILY SSF55729 2 158 6.97E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS02715 e10bac0d33c94c814dc3744fecbf4880 165 PANTHER PTHR13256 1 164 1.3E-54 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 SUPERFAMILY SSF51445 664 711 9.12E-33 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 SUPERFAMILY SSF51445 435 627 9.12E-33 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:3.20.20.80 914 997 2.0E-18 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:2.10.270.10 1173 1228 5.6E-12 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:2.10.270.10 1229 1298 1.0E-12 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:2.10.270.10 1299 1363 8.0E-16 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 SUPERFAMILY SSF51445 889 1039 2.64E-24 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:3.20.20.80 442 716 2.7E-25 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:2.10.270.10 1364 1428 2.0E-18 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:2.10.270.10 1429 1477 1.1E-10 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 SUPERFAMILY SSF69360 1268 1477 3.99E-39 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1294 1357 2.2E-23 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1424 1478 6.1E-21 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1359 1422 8.6E-24 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 TIGRFAM TIGR04035 glucan_65_rpt: glucan-binding repeat 1224 1292 5.8E-17 T 22-04-2016 IPR027636 Glucan-binding repeat KEGG: 00500+2.4.1.5 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 11 29 4.6E-6 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Pfam PF02324 Glycosyl hydrolase family 70 317 1133 0.0 T 22-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Gene3D G3DSA:2.10.270.10 1127 1172 3.6E-10 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Pfam PF01473 Putative cell wall binding repeat 1172 1187 0.29 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 Pfam PF01473 Putative cell wall binding repeat 1151 1169 7.2E-5 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 SUPERFAMILY SSF69360 208 249 9.29E-8 T 22-04-2016 LMES_RS07840 0e987254dff353e8ab19d8ad6bf938f9 1479 SUPERFAMILY SSF69360 1124 1327 6.51E-34 T 22-04-2016 LMES_RS01255 159edc108483b157a6951fd26012c67d 178 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 34 142 3.0E-7 T 22-04-2016 LMES_RS01255 159edc108483b157a6951fd26012c67d 178 Pfam PF00466 Ribosomal protein L10 7 101 2.7E-25 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 LMES_RS01255 159edc108483b157a6951fd26012c67d 178 PANTHER PTHR11560 1 178 5.7E-47 T 22-04-2016 LMES_RS01255 159edc108483b157a6951fd26012c67d 178 SUPERFAMILY SSF160369 7 162 2.75E-48 T 22-04-2016 LMES_RS01255 159edc108483b157a6951fd26012c67d 178 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 162 25.429 T 22-04-2016 IPR022973 Ribosomal protein L10 LMES_RS07630 74e961f5f03fa4101e5325b0986978da 127 Pfam PF00575 S1 RNA binding domain 3 75 2.6E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 LMES_RS07630 74e961f5f03fa4101e5325b0986978da 127 SMART SM00316 4 75 1.1E-16 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS07630 74e961f5f03fa4101e5325b0986978da 127 SUPERFAMILY SSF50249 4 78 1.27E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07630 74e961f5f03fa4101e5325b0986978da 127 Gene3D G3DSA:2.40.50.140 1 78 1.7E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07630 74e961f5f03fa4101e5325b0986978da 127 PANTHER PTHR10724 2 120 4.1E-27 T 22-04-2016 LMES_RS07630 74e961f5f03fa4101e5325b0986978da 127 PANTHER PTHR10724:SF8 2 120 4.1E-27 T 22-04-2016 LMES_RS07455 8985172ad5039e1d24086f1e0f9b8ea6 257 SMART SM00382 98 240 9.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS07455 8985172ad5039e1d24086f1e0f9b8ea6 257 Pfam PF01695 IstB-like ATP binding protein 96 178 1.7E-7 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 LMES_RS07455 8985172ad5039e1d24086f1e0f9b8ea6 257 SUPERFAMILY SSF52540 81 230 5.31E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07455 8985172ad5039e1d24086f1e0f9b8ea6 257 Gene3D G3DSA:3.40.50.300 90 238 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04480 e080ec585bef42114e808cfcd1aadef0 105 PANTHER PTHR34581 2 86 4.9E-18 T 22-04-2016 LMES_RS04480 e080ec585bef42114e808cfcd1aadef0 105 Gene3D G3DSA:3.40.50.270 1 87 3.7E-19 T 22-04-2016 LMES_RS04480 e080ec585bef42114e808cfcd1aadef0 105 SUPERFAMILY SSF52794 1 89 4.45E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS04480 e080ec585bef42114e808cfcd1aadef0 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 99 2.0E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS06020 0dbd7ffc7a5d36927944d08ec03a3d45 211 PANTHER PTHR41274 3 202 2.4E-27 T 22-04-2016 LMES_RS06020 0dbd7ffc7a5d36927944d08ec03a3d45 211 SUPERFAMILY SSF158499 125 190 1.06E-18 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain LMES_RS06020 0dbd7ffc7a5d36927944d08ec03a3d45 211 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 125 195 2.7E-19 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain LMES_RS06020 0dbd7ffc7a5d36927944d08ec03a3d45 211 Pfam PF07261 Replication initiation and membrane attachment 126 195 6.8E-24 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain LMES_RS06020 0dbd7ffc7a5d36927944d08ec03a3d45 211 Gene3D G3DSA:1.10.10.630 122 194 2.1E-25 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain LMES_RS07930 7da5308d43a05245e8c848562920e174 247 PANTHER PTHR23026:SF98 1 192 3.2E-27 T 22-04-2016 LMES_RS07930 7da5308d43a05245e8c848562920e174 247 PANTHER PTHR23026 1 192 3.2E-27 T 22-04-2016 LMES_RS07930 7da5308d43a05245e8c848562920e174 247 PIRSF PIRSF005426 1 247 1.5E-50 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 LMES_RS07930 7da5308d43a05245e8c848562920e174 247 Pfam PF00881 Nitroreductase family 11 166 4.1E-15 T 22-04-2016 IPR029479 Nitroreductase LMES_RS07930 7da5308d43a05245e8c848562920e174 247 Gene3D G3DSA:3.40.109.10 3 246 1.5E-48 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LMES_RS07930 7da5308d43a05245e8c848562920e174 247 SUPERFAMILY SSF55469 3 246 2.58E-49 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 PANTHER PTHR10010 1 215 5.0E-46 T 22-04-2016 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 PIRSF PIRSF003107 1 218 1.6E-55 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 214 3.6E-58 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 PANTHER PTHR10010:SF14 1 215 5.0E-46 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 SUPERFAMILY SSF109755 2 218 9.42E-57 T 22-04-2016 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 Pfam PF01895 PhoU domain 121 205 2.1E-12 T 22-04-2016 IPR026022 PhoU domain LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 Pfam PF01895 PhoU domain 17 103 2.0E-21 T 22-04-2016 IPR026022 PhoU domain LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 Gene3D G3DSA:1.20.58.220 1 108 8.0E-32 T 22-04-2016 LMES_RS02850 1184b9b09118125a51c2e1f2bf38f756 224 Gene3D G3DSA:1.20.58.220 115 216 5.1E-20 T 22-04-2016 LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 Gene3D G3DSA:1.20.1250.20 211 387 9.9E-20 T 22-04-2016 LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 Gene3D G3DSA:1.20.1250.20 7 187 2.0E-27 T 22-04-2016 LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 Pfam PF07690 Major Facilitator Superfamily 14 294 5.0E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 SUPERFAMILY SSF103473 7 387 7.06E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 PANTHER PTHR23501:SF29 1 380 8.3E-149 T 22-04-2016 LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS00185 05242c36066071ddaf325a129fc3416a 401 PANTHER PTHR23501 1 380 8.3E-149 T 22-04-2016 LMES_RS04455 ee2383ea4412085c2fb86694bc2d3c74 444 PANTHER PTHR30354 1 444 6.7E-204 T 22-04-2016 LMES_RS04455 ee2383ea4412085c2fb86694bc2d3c74 444 PANTHER PTHR30354:SF1 1 444 6.7E-204 T 22-04-2016 LMES_RS04455 ee2383ea4412085c2fb86694bc2d3c74 444 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 443 4.1E-167 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LMES_RS04455 ee2383ea4412085c2fb86694bc2d3c74 444 Pfam PF02447 GntP family permease 1 441 1.2E-158 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LMES_RS04455 ee2383ea4412085c2fb86694bc2d3c74 444 PIRSF PIRSF002746 1 444 1.5E-160 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LMES_RS05695 e00df94757f2db3640ef78478dace081 331 PANTHER PTHR10091:SF0 1 330 1.6E-73 T 22-04-2016 LMES_RS05695 e00df94757f2db3640ef78478dace081 331 PANTHER PTHR10091 1 330 1.6E-73 T 22-04-2016 LMES_RS05695 e00df94757f2db3640ef78478dace081 331 Pfam PF01263 Aldose 1-epimerase 20 328 1.1E-63 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LMES_RS05695 e00df94757f2db3640ef78478dace081 331 Gene3D G3DSA:2.70.98.10 1 329 7.7E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LMES_RS05695 e00df94757f2db3640ef78478dace081 331 SUPERFAMILY SSF74650 4 329 9.42E-84 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LMES_RS07800 e0581e8231c906a92c15cce44a59bbb9 216 Pfam PF13460 NAD(P)H-binding 9 199 4.7E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07800 e0581e8231c906a92c15cce44a59bbb9 216 Gene3D G3DSA:3.40.50.720 4 215 2.5E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07800 e0581e8231c906a92c15cce44a59bbb9 216 PANTHER PTHR15020 1 214 1.4E-33 T 22-04-2016 LMES_RS07800 e0581e8231c906a92c15cce44a59bbb9 216 SUPERFAMILY SSF51735 4 215 2.28E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07800 e0581e8231c906a92c15cce44a59bbb9 216 PANTHER PTHR15020:SF29 1 214 1.4E-33 T 22-04-2016 LMES_RS09085 fdce4c46cca1d008ad17cc7080c4deea 450 Pfam PF03553 Na+/H+ antiporter family 157 444 7.4E-40 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 LMES_RS09085 fdce4c46cca1d008ad17cc7080c4deea 450 PANTHER PTHR33451:SF6 13 446 2.8E-114 T 22-04-2016 LMES_RS09085 fdce4c46cca1d008ad17cc7080c4deea 450 PANTHER PTHR33451 13 446 2.8E-114 T 22-04-2016 LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 Pfam PF01432 Peptidase family M3 204 582 2.8E-72 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 Gene3D G3DSA:3.40.390.10 380 424 8.7E-5 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 Gene3D G3DSA:1.10.287.830 181 224 4.2E-18 T 22-04-2016 LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 PANTHER PTHR11804 154 595 2.9E-97 T 22-04-2016 LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 8 594 2.4E-183 T 22-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 Pfam PF08439 Oligopeptidase F 115 183 1.8E-18 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain LMES_RS02105 6cfc8724308e6da174c3b3a8e80096dd 597 SUPERFAMILY SSF55486 1 581 3.02E-127 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 SUPERFAMILY SSF48168 23 170 2.88E-38 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 99 705 1.1E-150 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 Pfam PF02867 Ribonucleotide reductase, barrel domain 172 702 1.7E-139 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 Gene3D G3DSA:3.20.70.20 91 293 2.3E-52 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 Gene3D G3DSA:3.20.70.20 346 509 2.3E-52 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 Gene3D G3DSA:3.20.70.20 571 671 2.3E-52 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 598 1.1E-26 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PRINTS PR01183 Ribonucleotide reductase large chain signature 489 512 1.1E-26 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PRINTS PR01183 Ribonucleotide reductase large chain signature 461 483 1.1E-26 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PRINTS PR01183 Ribonucleotide reductase large chain signature 378 389 1.1E-26 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PRINTS PR01183 Ribonucleotide reductase large chain signature 247 266 1.1E-26 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PANTHER PTHR11573 9 665 3.7E-203 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 PANTHER PTHR11573 681 705 3.7E-203 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 SUPERFAMILY SSF51998 171 705 1.31E-171 T 22-04-2016 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 12 723 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 Pfam PF08343 Ribonucleotide reductase N-terminal 13 93 1.5E-25 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LMES_RS01175 b9b25e668c597542de527c1217e779a0 723 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 95 167 1.5E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LMES_RS06745 939d8c13a230cf2cdc87b9999c9cd276 387 SUPERFAMILY SSF116734 1 193 2.45E-37 T 22-04-2016 LMES_RS06745 939d8c13a230cf2cdc87b9999c9cd276 387 Pfam PF01420 Type I restriction modification DNA specificity domain 1 169 1.1E-10 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LMES_RS06745 939d8c13a230cf2cdc87b9999c9cd276 387 Pfam PF01420 Type I restriction modification DNA specificity domain 192 375 2.2E-15 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LMES_RS06745 939d8c13a230cf2cdc87b9999c9cd276 387 SUPERFAMILY SSF116734 186 386 2.78E-35 T 22-04-2016 LMES_RS04335 0fd76e625206731db0e2f8ddc9c756b9 522 Pfam PF01943 Polysaccharide biosynthesis protein 12 315 2.1E-21 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LMES_RS04335 0fd76e625206731db0e2f8ddc9c756b9 522 PANTHER PTHR30250 1 522 7.3E-72 T 22-04-2016 LMES_RS04335 0fd76e625206731db0e2f8ddc9c756b9 522 PANTHER PTHR30250:SF6 1 522 7.3E-72 T 22-04-2016 LMES_RS04335 0fd76e625206731db0e2f8ddc9c756b9 522 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 369 510 4.0E-16 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LMES_RS09100 233e5b92bbda0c5c0b70ff0e11c37ddd 126 PANTHER PTHR33204:SF2 3 103 4.3E-48 T 22-04-2016 LMES_RS09100 233e5b92bbda0c5c0b70ff0e11c37ddd 126 SUPERFAMILY SSF46785 5 106 2.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09100 233e5b92bbda0c5c0b70ff0e11c37ddd 126 PANTHER PTHR33204 3 103 4.3E-48 T 22-04-2016 LMES_RS09100 233e5b92bbda0c5c0b70ff0e11c37ddd 126 Pfam PF01638 HxlR-like helix-turn-helix 15 102 9.6E-34 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type LMES_RS09100 233e5b92bbda0c5c0b70ff0e11c37ddd 126 Gene3D G3DSA:1.10.10.10 6 107 4.0E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 PANTHER PTHR21089 122 292 1.2E-41 T 22-04-2016 LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 PANTHER PTHR21089 16 68 1.2E-41 T 22-04-2016 LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 Gene3D G3DSA:3.20.20.70 101 293 5.8E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 Gene3D G3DSA:3.20.20.70 13 51 5.8E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 SUPERFAMILY SSF51569 103 292 2.53E-55 T 22-04-2016 LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 SUPERFAMILY SSF51569 3 54 2.53E-55 T 22-04-2016 LMES_RS05080 44e2818a986651ca2e3c59b6207d13d1 293 Pfam PF01487 Type I 3-dehydroquinase 107 291 1.8E-44 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LMES_RS04075 c3941e644c53ad38cf7ba8e0503de2d9 416 Pfam PF07690 Major Facilitator Superfamily 244 408 2.6E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04075 c3941e644c53ad38cf7ba8e0503de2d9 416 PANTHER PTHR23528 21 416 5.1E-42 T 22-04-2016 LMES_RS04075 c3941e644c53ad38cf7ba8e0503de2d9 416 Gene3D G3DSA:1.20.1250.20 231 413 1.1E-22 T 22-04-2016 LMES_RS04075 c3941e644c53ad38cf7ba8e0503de2d9 416 Gene3D G3DSA:1.20.1250.20 22 204 4.6E-23 T 22-04-2016 LMES_RS04075 c3941e644c53ad38cf7ba8e0503de2d9 416 SUPERFAMILY SSF103473 16 412 1.31E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04075 c3941e644c53ad38cf7ba8e0503de2d9 416 PANTHER PTHR23528:SF1 21 416 5.1E-42 T 22-04-2016 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 SUPERFAMILY SSF50494 61 283 2.15E-50 T 22-04-2016 IPR009003 Peptidase S1, PA clan LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 Gene3D G3DSA:2.40.10.10 173 284 1.2E-35 T 22-04-2016 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 Gene3D G3DSA:2.40.10.10 60 169 6.6E-25 T 22-04-2016 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 Pfam PF13365 Trypsin-like peptidase domain 107 250 2.0E-29 T 22-04-2016 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.5E-30 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PRINTS PR00834 HtrA/DegQ protease family signature 140 160 1.5E-30 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PRINTS PR00834 HtrA/DegQ protease family signature 119 131 1.5E-30 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 1.5E-30 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 1.5E-30 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PANTHER PTHR22939 57 285 9.3E-61 T 22-04-2016 LMES_RS08115 bc3c01e98b360802ea7266dacb05e41f 285 PANTHER PTHR22939:SF79 57 285 9.3E-61 T 22-04-2016 LMES_RS00050 1d91d191023c16c28bcbeeae9ad7aaaf 541 Pfam PF00534 Glycosyl transferases group 1 335 491 3.4E-19 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS00050 1d91d191023c16c28bcbeeae9ad7aaaf 541 Gene3D G3DSA:3.40.50.2000 334 487 8.1E-12 T 22-04-2016 LMES_RS00050 1d91d191023c16c28bcbeeae9ad7aaaf 541 PANTHER PTHR12526 283 502 2.6E-19 T 22-04-2016 LMES_RS00050 1d91d191023c16c28bcbeeae9ad7aaaf 541 SUPERFAMILY SSF53756 2 78 3.45E-35 T 22-04-2016 LMES_RS00050 1d91d191023c16c28bcbeeae9ad7aaaf 541 SUPERFAMILY SSF53756 223 507 3.45E-35 T 22-04-2016 LMES_RS00050 1d91d191023c16c28bcbeeae9ad7aaaf 541 Hamap MF_01472 Glycosyltransferase Gtf1 [gtf1]. 1 513 27.873 T 22-04-2016 IPR014267 Glycosyltransferase Gtf1 GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 349 6.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 6.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 330 6.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 6.7E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 351 3.7E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 SMART SM00388 132 197 3.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 Gene3D G3DSA:3.30.565.10 204 351 1.3E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 SUPERFAMILY SSF47384 116 197 1.55E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 SUPERFAMILY SSF55874 187 352 1.05E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 Gene3D G3DSA:1.10.287.130 122 193 3.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 196 1.4E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 PANTHER PTHR24423 69 350 2.8E-77 T 22-04-2016 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 PANTHER PTHR24423 1 11 2.8E-77 T 22-04-2016 LMES_RS04625 59272a7e0bbb46ac87b4a55c7db5ab04 355 SMART SM00387 242 352 4.9E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 PANTHER PTHR11735 1 135 5.9E-38 T 22-04-2016 LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 SUPERFAMILY SSF53067 107 209 8.16E-6 T 22-04-2016 LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 Pfam PF00814 Glycoprotease family 29 128 6.1E-25 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 Gene3D G3DSA:3.30.420.40 1 127 3.6E-36 T 22-04-2016 LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 SUPERFAMILY SSF53067 1 102 6.47E-25 T 22-04-2016 LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 PANTHER PTHR11735:SF11 1 135 5.9E-38 T 22-04-2016 LMES_RS07970 0bf3c5a5b6ae4128fa6b1ad7ee31a581 236 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 211 1.9E-45 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PRINTS PR00069 Aldo-keto reductase signature 195 219 3.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PRINTS PR00069 Aldo-keto reductase signature 34 58 3.2E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 SUPERFAMILY SSF51430 4 263 6.55E-78 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PIRSF PIRSF000097 1 277 1.4E-67 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 Gene3D G3DSA:3.20.20.100 4 268 1.3E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 Pfam PF00248 Aldo/keto reductase family 15 259 9.1E-44 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS03805 2126a3a1d3321b15d63f6a0ed84ffd92 277 PANTHER PTHR11732 1 263 1.4E-106 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 PANTHER PTHR11067 1 201 1.4E-67 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 PANTHER PTHR11067:SF9 1 201 1.4E-67 T 22-04-2016 LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 Pfam PF01725 Ham1 family 3 190 1.8E-54 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 Gene3D G3DSA:3.90.950.10 2 195 6.3E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 194 1.8E-57 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 SUPERFAMILY SSF52972 2 194 9.68E-62 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LMES_RS02930 8ec1e99fd739c16dddf5fe536b50840e 201 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 196 45.076 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LMES_RS03080 645d87a523a71e43d802750d35431f43 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 59 4.1E-19 T 22-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 LMES_RS03080 645d87a523a71e43d802750d35431f43 61 Pfam PF01361 Tautomerase enzyme 2 60 1.6E-19 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 LMES_RS03080 645d87a523a71e43d802750d35431f43 61 SUPERFAMILY SSF55331 2 60 2.36E-17 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily LMES_RS03080 645d87a523a71e43d802750d35431f43 61 Gene3D G3DSA:3.30.429.20 1 61 7.2E-24 T 22-04-2016 LMES_RS03080 645d87a523a71e43d802750d35431f43 61 PANTHER PTHR35530 1 61 5.5E-15 T 22-04-2016 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 SUPERFAMILY SSF53850 50 293 9.52E-74 T 22-04-2016 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 PANTHER PTHR30570 5 300 2.2E-122 T 22-04-2016 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 Pfam PF12849 PBP superfamily domain 35 271 6.6E-38 T 22-04-2016 IPR024370 PBP domain LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 Gene3D G3DSA:3.40.190.10 134 246 3.1E-41 T 22-04-2016 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 PANTHER PTHR30570:SF4 5 300 2.2E-122 T 22-04-2016 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 284 8.5E-83 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 Gene3D G3DSA:3.40.190.10 13 133 3.3E-10 T 22-04-2016 LMES_RS02815 00eb2f163877e962dc72c3d6ba812152 302 Gene3D G3DSA:3.40.190.10 247 280 3.3E-10 T 22-04-2016 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 Pfam PF00293 NUDIX domain 24 138 6.0E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 PANTHER PTHR41377 162 312 3.5E-39 T 22-04-2016 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 Pfam PF08837 Protein of unknown function (DUF1810) 170 310 4.9E-49 T 22-04-2016 IPR014937 Protein of unknown function DUF1810 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 SUPERFAMILY SSF140736 170 311 1.19E-47 T 22-04-2016 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 PANTHER PTHR41377:SF1 162 312 3.5E-39 T 22-04-2016 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 Gene3D G3DSA:3.90.79.10 23 169 2.3E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS00690 9855a606dfe4b20d6d371cd4ef00f73f 312 SUPERFAMILY SSF55811 13 157 1.34E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 185 197 7.0E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 390 404 7.0E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 201 214 7.0E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 PRINTS PR01042 Aspartyl-tRNA synthetase signature 350 366 7.0E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 430 1.3E-77 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 Gene3D G3DSA:3.30.930.10 107 434 1.5E-107 T 22-04-2016 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 12 434 5.7E-152 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 Pfam PF01336 OB-fold nucleic acid binding domain 21 100 5.2E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 PANTHER PTHR22594:SF16 3 435 1.1E-171 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 Gene3D G3DSA:2.40.50.140 13 106 8.7E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 PANTHER PTHR22594 3 435 1.1E-171 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 SUPERFAMILY SSF55681 103 434 6.97E-89 T 22-04-2016 LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 SUPERFAMILY SSF50249 14 107 1.9E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS06025 0f9db5f5ca793e2efaefea8c92520265 435 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 435 40.879 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 SMART SM00382 363 548 4.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 PANTHER PTHR24222:SF30 8 568 2.6E-134 T 22-04-2016 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 Pfam PF00005 ABC transporter 354 501 5.7E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 12 532 1.3E-136 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 SUPERFAMILY SSF52540 335 569 8.14E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 SUPERFAMILY SSF90123 478 491 2.62E-33 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 SUPERFAMILY SSF90123 11 308 2.62E-33 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 Gene3D G3DSA:1.20.1560.10 11 300 1.2E-17 T 22-04-2016 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 Gene3D G3DSA:3.40.50.300 339 570 8.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02705 2b9e91f4ea62b30e620f3836d501283f 574 PANTHER PTHR24222 8 568 2.6E-134 T 22-04-2016 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 Gene3D G3DSA:3.40.50.2300 173 328 7.7E-27 T 22-04-2016 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 Pfam PF13377 Periplasmic binding protein-like domain 174 328 7.6E-25 T 22-04-2016 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 Gene3D G3DSA:3.40.50.2300 62 172 8.4E-28 T 22-04-2016 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 SUPERFAMILY SSF47413 3 63 4.93E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 SUPERFAMILY SSF53822 65 328 1.47E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 52 2.7E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 SMART SM00354 4 75 1.9E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 PANTHER PTHR30146 4 328 7.4E-75 T 22-04-2016 LMES_RS02380 0bf5f356538008a5fa0e6df2a9034eee 329 Gene3D G3DSA:1.10.260.40 3 61 7.7E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PRINTS PR00412 Epoxide hydrolase signature 249 271 3.1E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PRINTS PR00412 Epoxide hydrolase signature 97 110 3.1E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PRINTS PR00412 Epoxide hydrolase signature 34 52 3.1E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 218 232 8.7E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 8.7E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 8.7E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 Gene3D G3DSA:3.40.50.1820 18 273 8.4E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 Pfam PF12697 Alpha/beta hydrolase family 30 264 2.7E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PANTHER PTHR10992 18 274 1.7E-39 T 22-04-2016 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 PANTHER PTHR10992:SF830 18 274 1.7E-39 T 22-04-2016 LMES_RS04815 d83eae52901f38fe4d5cd64ba995e084 274 SUPERFAMILY SSF53474 18 273 5.77E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 PANTHER PTHR11751 18 389 1.5E-146 T 22-04-2016 LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 SUPERFAMILY SSF53383 11 389 1.18E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 Gene3D G3DSA:3.40.640.10 50 259 7.5E-66 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 Gene3D G3DSA:3.90.1150.10 260 389 1.8E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 Pfam PF00155 Aminotransferase class I and II 36 375 4.9E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS04445 d7829473bb16d5372d2f156fe15a3b50 401 PANTHER PTHR11751:SF417 18 389 1.5E-146 T 22-04-2016 LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 188 2.6E-48 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 Pfam PF00436 Single-strand binding protein family 2 102 9.2E-34 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 SUPERFAMILY SSF50249 1 188 4.11E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 Gene3D G3DSA:2.40.50.140 1 117 6.9E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 Gene3D G3DSA:2.40.50.140 156 188 6.9E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 PANTHER PTHR10302 1 188 2.4E-41 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS08905 fd6c03dfba0c11eb6c282ee597a359db 188 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 33.403 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS04440 6a575757fdcfc740db75230cfac60c45 132 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 89 1.0E-14 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LMES_RS04440 6a575757fdcfc740db75230cfac60c45 132 PANTHER PTHR40660 1 132 1.7E-18 T 22-04-2016 LMES_RS04440 6a575757fdcfc740db75230cfac60c45 132 Gene3D G3DSA:2.30.110.10 1 119 9.9E-35 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LMES_RS04440 6a575757fdcfc740db75230cfac60c45 132 SUPERFAMILY SSF50475 4 121 2.29E-21 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LMES_RS02290 c09fec86d1cdb8893f85fab159050da3 392 SUPERFAMILY SSF53822 36 386 5.26E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS02290 c09fec86d1cdb8893f85fab159050da3 392 Pfam PF13458 Periplasmic binding protein 36 384 1.9E-56 T 22-04-2016 IPR028081 Leucine-binding protein domain LMES_RS02290 c09fec86d1cdb8893f85fab159050da3 392 PANTHER PTHR30483:SF6 23 384 2.6E-72 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LMES_RS02290 c09fec86d1cdb8893f85fab159050da3 392 Gene3D G3DSA:3.40.50.2300 164 333 2.7E-45 T 22-04-2016 LMES_RS02290 c09fec86d1cdb8893f85fab159050da3 392 PANTHER PTHR30483 23 384 2.6E-72 T 22-04-2016 LMES_RS02290 c09fec86d1cdb8893f85fab159050da3 392 Gene3D G3DSA:3.40.50.2300 35 144 1.1E-8 T 22-04-2016 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 PANTHER PTHR21499:SF3 3 450 3.6E-109 T 22-04-2016 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 SUPERFAMILY SSF53633 1 290 2.88E-64 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 PANTHER PTHR21499 3 450 3.6E-109 T 22-04-2016 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 Gene3D G3DSA:3.40.1160.10 1 292 1.8E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 SUPERFAMILY SSF55021 298 361 2.44E-8 T 22-04-2016 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 SUPERFAMILY SSF55021 378 450 6.2E-14 T 22-04-2016 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 Pfam PF00696 Amino acid kinase family 2 277 2.1E-37 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 PIRSF PIRSF000726 1 451 7.2E-69 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 450 2.7E-73 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS03770 32123f73d63f968388b0c735f0742c58 451 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 SUPERFAMILY SSF48557 8 458 6.91E-147 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PANTHER PTHR11444 2 457 6.2E-230 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 42.584 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 Pfam PF00206 Lyase 8 299 7.6E-72 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 Gene3D G3DSA:1.20.200.10 109 375 2.5E-101 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 456 1.0E-190 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PANTHER PTHR11444:SF3 2 457 6.2E-230 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 9.0E-65 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 9.0E-65 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 9.0E-65 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 9.0E-65 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 9.0E-65 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 9.0E-65 T 22-04-2016 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 Gene3D G3DSA:1.10.275.10 4 108 1.9E-40 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.3E-27 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 1.3E-27 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 1.3E-27 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 1.3E-27 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 Pfam PF14698 Argininosuccinate lyase C-terminal 365 433 2.8E-21 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LMES_RS06420 f6d3a67593f04bef12e662267de9abf4 460 Gene3D G3DSA:1.10.40.30 376 433 1.5E-25 T 22-04-2016 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 SUPERFAMILY SSF53335 14 52 3.86E-130 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 SUPERFAMILY SSF53335 88 512 3.86E-130 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 Gene3D G3DSA:3.40.50.150 205 434 2.8E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 PANTHER PTHR30408:SF4 164 500 2.4E-144 T 22-04-2016 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 11 493 1.8E-135 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 Pfam PF02384 N-6 DNA Methylase 180 480 1.6E-107 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 229 243 2.3E-21 T 22-04-2016 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 2.3E-21 T 22-04-2016 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 297 309 2.3E-21 T 22-04-2016 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 203 219 2.3E-21 T 22-04-2016 LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 Pfam PF12161 HsdM N-terminal domain 15 165 8.6E-19 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain LMES_RS06760 d36fb4130d1169f46a66f7bd0a771285 518 PANTHER PTHR30408 164 500 2.4E-144 T 22-04-2016 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 Pfam PF01368 DHH family 351 519 8.5E-18 T 22-04-2016 IPR001667 DDH domain LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 PIRSF PIRSF026583 10 675 1.2E-220 T 22-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 PANTHER PTHR12112:SF18 27 544 1.9E-118 T 22-04-2016 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 PANTHER PTHR12112 27 544 1.9E-118 T 22-04-2016 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 PANTHER PTHR12112 583 614 1.9E-118 T 22-04-2016 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 SUPERFAMILY SSF64182 350 666 1.96E-59 T 22-04-2016 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 Pfam PF02272 DHHA1 domain 611 664 2.6E-5 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 PANTHER PTHR12112:SF18 583 614 1.9E-118 T 22-04-2016 LMES_RS08895 7b6767e06e007ee9af28dd94154775b8 675 Gene3D G3DSA:3.90.1640.10 350 557 1.9E-37 T 22-04-2016 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 Gene3D G3DSA:3.20.20.120 142 339 2.4E-37 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 14 328 4.2E-66 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 PANTHER PTHR13794:SF8 1 361 7.1E-64 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 2 356 29.561 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 Pfam PF13378 Enolase C-terminal domain-like 146 351 4.0E-23 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 131 1.9E-6 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 PANTHER PTHR13794 1 361 7.1E-64 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 SUPERFAMILY SSF54826 3 133 7.55E-20 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 SUPERFAMILY SSF51604 124 360 3.54E-38 T 22-04-2016 IPR029065 Enolase C-terminal domain-like LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 Gene3D G3DSA:3.30.390.10 1 141 7.2E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LMES_RS03620 d74d4c23b6fd746342fcd1c72a066140 366 SMART SM00922 143 235 2.5E-7 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LMES_RS07215 0cba64d3ba97e397a0aa0865a216a7bb 280 Gene3D G3DSA:3.40.50.1980 19 158 3.2E-8 T 22-04-2016 LMES_RS07215 0cba64d3ba97e397a0aa0865a216a7bb 280 SUPERFAMILY SSF53807 36 279 1.91E-24 T 22-04-2016 LMES_RS07215 0cba64d3ba97e397a0aa0865a216a7bb 280 Pfam PF01297 Zinc-uptake complex component A periplasmic 71 260 3.3E-11 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LMES_RS04865 7ae048afebee362bb433a1c7e1ace752 66 SUPERFAMILY SSF47413 2 64 5.9E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04865 7ae048afebee362bb433a1c7e1ace752 66 Gene3D G3DSA:1.10.260.40 2 62 7.8E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04865 7ae048afebee362bb433a1c7e1ace752 66 SMART SM00530 3 58 4.7E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS04865 7ae048afebee362bb433a1c7e1ace752 66 PANTHER PTHR10245 4 66 1.1E-18 T 22-04-2016 LMES_RS04865 7ae048afebee362bb433a1c7e1ace752 66 Pfam PF01381 Helix-turn-helix 4 56 7.5E-18 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS04865 7ae048afebee362bb433a1c7e1ace752 66 PANTHER PTHR10245:SF56 4 66 1.1E-18 T 22-04-2016 LMES_RS00705 6ff754f899a41fd9aa24d83afdedcaf4 93 Gene3D G3DSA:3.40.630.30 2 89 3.3E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS00705 6ff754f899a41fd9aa24d83afdedcaf4 93 SUPERFAMILY SSF55729 2 89 1.86E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS00705 6ff754f899a41fd9aa24d83afdedcaf4 93 PANTHER PTHR31435 6 91 5.4E-17 T 22-04-2016 LMES_RS00705 6ff754f899a41fd9aa24d83afdedcaf4 93 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 3.5E-22 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase LMES_RS07595 9aacd3726acab2bba8186eed3a54f52d 235 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 230 5.4E-48 T 22-04-2016 IPR008681 Negative regulator of genetic competence, MecA LMES_RS07595 9aacd3726acab2bba8186eed3a54f52d 235 PANTHER PTHR39161 2 235 1.4E-33 T 22-04-2016 LMES_RS07595 9aacd3726acab2bba8186eed3a54f52d 235 Hamap MF_01124 Adapter protein MecA [mecA]. 1 234 21.373 T 22-04-2016 IPR008681 Negative regulator of genetic competence, MecA LMES_RS07595 9aacd3726acab2bba8186eed3a54f52d 235 PANTHER PTHR39161:SF1 2 235 1.4E-33 T 22-04-2016 LMES_RS07595 9aacd3726acab2bba8186eed3a54f52d 235 PIRSF PIRSF029008 1 235 5.1E-56 T 22-04-2016 IPR008681 Negative regulator of genetic competence, MecA LMES_RS06940 3579fbfb880241a2a272fc6ff4e2a5ef 242 Gene3D G3DSA:3.20.20.450 12 233 6.3E-25 T 22-04-2016 IPR001633 EAL domain LMES_RS06940 3579fbfb880241a2a272fc6ff4e2a5ef 242 Pfam PF00563 EAL domain 12 232 1.9E-25 T 22-04-2016 IPR001633 EAL domain LMES_RS06940 3579fbfb880241a2a272fc6ff4e2a5ef 242 PANTHER PTHR33121:SF10 13 242 4.1E-16 T 22-04-2016 LMES_RS06940 3579fbfb880241a2a272fc6ff4e2a5ef 242 SMART SM00052 2 237 5.2E-7 T 22-04-2016 IPR001633 EAL domain LMES_RS06940 3579fbfb880241a2a272fc6ff4e2a5ef 242 SUPERFAMILY SSF141868 13 232 6.28E-32 T 22-04-2016 IPR001633 EAL domain LMES_RS06940 3579fbfb880241a2a272fc6ff4e2a5ef 242 PANTHER PTHR33121 13 242 4.1E-16 T 22-04-2016 LMES_RS04715 94a287adad3f6d6280deb4890b022cf8 404 Gene3D G3DSA:3.90.550.10 47 291 1.6E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04715 94a287adad3f6d6280deb4890b022cf8 404 SUPERFAMILY SSF53448 45 309 1.76E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04715 94a287adad3f6d6280deb4890b022cf8 404 PANTHER PTHR10859:SF92 29 349 6.3E-61 T 22-04-2016 LMES_RS04715 94a287adad3f6d6280deb4890b022cf8 404 Pfam PF13641 Glycosyltransferase like family 2 48 271 5.8E-33 T 22-04-2016 LMES_RS04715 94a287adad3f6d6280deb4890b022cf8 404 PANTHER PTHR10859 29 349 6.3E-61 T 22-04-2016 LMES_RS00430 9b3d976cc744c2b8f780f1fb935576b4 436 SUPERFAMILY SSF55874 298 414 5.85E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS00430 9b3d976cc744c2b8f780f1fb935576b4 436 PANTHER PTHR40448 1 436 1.9E-45 T 22-04-2016 LMES_RS00430 9b3d976cc744c2b8f780f1fb935576b4 436 Gene3D G3DSA:3.30.565.10 308 414 2.1E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LMES_RS00430 9b3d976cc744c2b8f780f1fb935576b4 436 PANTHER PTHR40448:SF1 1 436 1.9E-45 T 22-04-2016 LMES_RS00430 9b3d976cc744c2b8f780f1fb935576b4 436 Pfam PF14501 GHKL domain 332 432 2.2E-14 T 22-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 Gene3D G3DSA:3.40.50.300 2 139 3.4E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 330 6.4E-67 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 Gene3D G3DSA:1.20.272.20 226 319 1.3E-6 T 22-04-2016 LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 SUPERFAMILY SSF48019 216 329 1.45E-20 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 PANTHER PTHR34388 1 330 5.5E-52 T 22-04-2016 LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 Gene3D G3DSA:1.10.8.60 146 225 3.2E-12 T 22-04-2016 LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 SUPERFAMILY SSF52540 2 210 1.76E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07095 5a7a8d1eb52cc7eef4073605c201c53a 333 Pfam PF06144 DNA polymerase III, delta subunit 19 191 2.9E-32 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PANTHER PTHR12534 1 255 3.1E-120 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 Pfam PF00318 Ribosomal protein S2 9 224 7.3E-98 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.413 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.6E-43 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.6E-43 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.6E-43 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.6E-43 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.6E-43 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.6E-43 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 SUPERFAMILY SSF52313 6 228 1.83E-97 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.4E-107 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 Gene3D G3DSA:1.10.287.610 100 152 6.4E-27 T 22-04-2016 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 Gene3D G3DSA:3.40.50.10490 23 99 1.5E-67 T 22-04-2016 LMES_RS05275 b23f050319c5429daa10014a2f60eb72 258 Gene3D G3DSA:3.40.50.10490 158 247 1.5E-67 T 22-04-2016 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 Pfam PF01084 Ribosomal protein S18 38 88 9.3E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 14 93 22.581 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 PRINTS PR00974 Ribosomal protein S18 family signature 66 80 2.9E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 PRINTS PR00974 Ribosomal protein S18 family signature 58 65 2.9E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 PRINTS PR00974 Ribosomal protein S18 family signature 48 58 2.9E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 PRINTS PR00974 Ribosomal protein S18 family signature 80 90 2.9E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 TIGRFAM TIGR00165 S18: ribosomal protein bS18 26 92 4.0E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 Gene3D G3DSA:4.10.640.10 28 93 5.8E-34 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 ProSitePatterns PS00057 Ribosomal protein S18 signature. 41 64 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 40 93 2.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 PANTHER PTHR13479 16 94 2.8E-30 T 22-04-2016 LMES_RS08900 9c48e889699bd8d1135201bef6c56d5a 94 SUPERFAMILY SSF46911 21 93 1.2E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 PANTHER PTHR10457 14 301 6.0E-37 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 SUPERFAMILY SSF54211 10 189 1.37E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 Gene3D G3DSA:3.30.230.10 5 180 1.3E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 Pfam PF00288 GHMP kinases N terminal domain 91 152 2.7E-9 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 PRINTS PR00959 Mevalonate kinase family signature 11 35 2.4E-15 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 PRINTS PR00959 Mevalonate kinase family signature 95 117 2.4E-15 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 PRINTS PR00959 Mevalonate kinase family signature 268 285 2.4E-15 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 SUPERFAMILY SSF55060 174 309 2.08E-30 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 Pfam PF08544 GHMP kinases C terminal 226 302 6.3E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 11 283 2.5E-75 T 22-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 LMES_RS06045 5ffd5582b5f54683022beb8193333a16 310 Gene3D G3DSA:3.30.70.890 181 306 5.4E-32 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS01480 c0b4b80067f75ce8e7e1ae8b74b507c2 143 Gene3D G3DSA:3.10.129.10 3 141 1.0E-49 T 22-04-2016 IPR029069 HotDog domain LMES_RS01480 c0b4b80067f75ce8e7e1ae8b74b507c2 143 SUPERFAMILY SSF54637 2 141 3.56E-43 T 22-04-2016 IPR029069 HotDog domain LMES_RS01480 c0b4b80067f75ce8e7e1ae8b74b507c2 143 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 143 30.138 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LMES_RS01480 c0b4b80067f75ce8e7e1ae8b74b507c2 143 PANTHER PTHR30272 1 143 6.0E-61 T 22-04-2016 LMES_RS01480 c0b4b80067f75ce8e7e1ae8b74b507c2 143 Pfam PF07977 FabA-like domain 13 135 6.2E-30 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 Pfam PF00005 ABC transporter 18 162 6.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 SMART SM00382 26 212 6.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 Gene3D G3DSA:3.40.50.300 1 226 7.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 PANTHER PTHR24220:SF581 3 237 5.1E-105 T 22-04-2016 LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 PANTHER PTHR24220 3 237 5.1E-105 T 22-04-2016 LMES_RS04595 e33e39376bb5eb3da9fb530fa0198557 247 SUPERFAMILY SSF52540 2 225 1.41E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00555 cb4e543c3bd1b63abceb9571155fdf8b 112 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 105 5.3E-15 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LMES_RS00555 cb4e543c3bd1b63abceb9571155fdf8b 112 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 110 15.658 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 Gene3D G3DSA:2.40.50.140 942 1030 8.5E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 SUPERFAMILY SSF89550 11 64 2.55E-5 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 282 709 1.0E-150 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 Pfam PF01336 OB-fold nucleic acid binding domain 949 1024 1.5E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 SMART SM00481 3 70 1.9E-9 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 PANTHER PTHR32294 1 1111 0.0 T 22-04-2016 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 Gene3D G3DSA:3.20.20.140 18 91 1.4E-5 T 22-04-2016 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 984 1.0E-273 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 PANTHER PTHR32294:SF0 1 1111 0.0 T 22-04-2016 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 Pfam PF02811 PHP domain 9 161 2.1E-19 T 22-04-2016 IPR004013 PHP domain GO:0003824 LMES_RS03720 297aae14b4533b076adf366a4d133b3e 1112 Pfam PF14579 Helix-hairpin-helix motif 782 871 2.0E-19 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 241 3.6E-57 T 22-04-2016 LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.0E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.0E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 7.0E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.0E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.0E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PANTHER PTHR24322:SF328 153 184 9.2E-53 T 22-04-2016 LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PANTHER PTHR24322:SF328 11 137 9.2E-53 T 22-04-2016 LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.0E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 SUPERFAMILY SSF51735 6 243 7.37E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PANTHER PTHR24322 153 184 9.2E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 PANTHER PTHR24322 11 137 9.2E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 184 5.9E-6 T 22-04-2016 LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 Gene3D G3DSA:3.40.50.720 2 242 5.3E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01465 615367021304e4fda05bc6f7ac096adc 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PANTHER PTHR11732:SF236 1 287 1.3E-124 T 22-04-2016 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 Gene3D G3DSA:3.20.20.100 3 270 7.7E-94 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PRINTS PR00069 Aldo-keto reductase signature 197 221 4.8E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PRINTS PR00069 Aldo-keto reductase signature 35 59 4.8E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PRINTS PR00069 Aldo-keto reductase signature 158 187 4.8E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PRINTS PR00069 Aldo-keto reductase signature 95 113 4.8E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PRINTS PR00069 Aldo-keto reductase signature 124 141 4.8E-43 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 Pfam PF00248 Aldo/keto reductase family 23 261 7.1E-46 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 SUPERFAMILY SSF51430 4 269 2.23E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 PANTHER PTHR11732 1 287 1.3E-124 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS04670 b8b5106e2efc0e613cdaaa06d4097eec 292 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 Pfam PF08245 Mur ligase middle domain 107 309 6.3E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 PANTHER PTHR23135 15 473 5.3E-81 T 22-04-2016 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 SUPERFAMILY SSF63418 9 97 2.49E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 Gene3D G3DSA:3.40.1190.10 97 332 1.4E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 PANTHER PTHR23135:SF4 15 473 5.3E-81 T 22-04-2016 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 Gene3D G3DSA:3.90.190.20 340 473 7.6E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 27 482 7.5E-85 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 412 9.7E-13 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 SUPERFAMILY SSF53623 97 326 1.95E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03530 507e3dd30092b2fe15a1a4b6403dbfaf 490 SUPERFAMILY SSF53244 329 483 2.9E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS04525 6e272b963ec721cf4bbb09757308d189 169 PIRSF PIRSF024534 1 165 4.3E-27 T 22-04-2016 IPR012652 Energy coupling factor transporter S component ThiW LMES_RS04525 6e272b963ec721cf4bbb09757308d189 169 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 9 158 1.4E-49 T 22-04-2016 IPR012652 Energy coupling factor transporter S component ThiW LMES_RS04525 6e272b963ec721cf4bbb09757308d189 169 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 11 156 9.4E-51 T 22-04-2016 IPR012652 Energy coupling factor transporter S component ThiW LMES_RS01235 e1222bdb9e44939b7d0f4ed430c962c0 58 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 3 55 4.0E-19 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 LMES_RS01235 e1222bdb9e44939b7d0f4ed430c962c0 58 Gene3D G3DSA:1.20.5.1030 1 56 1.4E-19 T 22-04-2016 LMES_RS01235 e1222bdb9e44939b7d0f4ed430c962c0 58 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 54 10.289 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE LMES_RS01235 e1222bdb9e44939b7d0f4ed430c962c0 58 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 1 56 2.4E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 Pfam PF00231 ATP synthase 3 301 3.7E-80 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 Gene3D G3DSA:1.10.287.80 19 60 4.2E-23 T 22-04-2016 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 Gene3D G3DSA:1.10.287.80 216 249 4.2E-23 T 22-04-2016 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 301 6.1E-88 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 PRINTS PR00126 ATP synthase gamma subunit signature 279 300 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 PRINTS PR00126 ATP synthase gamma subunit signature 78 97 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 PRINTS PR00126 ATP synthase gamma subunit signature 171 188 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 PRINTS PR00126 ATP synthase gamma subunit signature 248 267 1.1E-31 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 301 31.921 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 Gene3D G3DSA:1.10.287.80 250 295 1.6E-24 T 22-04-2016 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 PANTHER PTHR11693 1 302 6.4E-87 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 SUPERFAMILY SSF52943 2 301 8.24E-78 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain LMES_RS08400 be85bc97689329404ff3486504fe1f92 302 Gene3D G3DSA:3.40.1380.10 71 196 1.5E-38 T 22-04-2016 LMES_RS03580 7e1de46d9d3102f82456f28c1ca34b4c 177 Pfam PF03729 Short repeat of unknown function (DUF308) 17 86 4.1E-13 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane LMES_RS03580 7e1de46d9d3102f82456f28c1ca34b4c 177 Pfam PF03729 Short repeat of unknown function (DUF308) 131 175 2.3E-4 T 22-04-2016 IPR005325 Protein of unknown function DUF308, membrane LMES_RS03235 37e9993fff61e60e0812e106685efc9a 227 PANTHER PTHR22936:SF4 5 225 1.4E-46 T 22-04-2016 LMES_RS03235 37e9993fff61e60e0812e106685efc9a 227 Gene3D G3DSA:1.20.1540.10 10 192 6.2E-43 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LMES_RS03235 37e9993fff61e60e0812e106685efc9a 227 Pfam PF01694 Rhomboid family 55 192 1.3E-35 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LMES_RS03235 37e9993fff61e60e0812e106685efc9a 227 SUPERFAMILY SSF144091 7 197 2.09E-43 T 22-04-2016 LMES_RS03235 37e9993fff61e60e0812e106685efc9a 227 PANTHER PTHR22936 5 225 1.4E-46 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 LMES_RS00540 0f51a3bc3f0abb467a2fb4b2a56dccae 287 Pfam PF03180 NLPA lipoprotein 38 278 4.0E-66 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS00540 0f51a3bc3f0abb467a2fb4b2a56dccae 287 Gene3D G3DSA:3.40.190.10 37 166 6.7E-45 T 22-04-2016 LMES_RS00540 0f51a3bc3f0abb467a2fb4b2a56dccae 287 PANTHER PTHR30429 2 280 2.0E-75 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS00540 0f51a3bc3f0abb467a2fb4b2a56dccae 287 SUPERFAMILY SSF53850 36 279 2.23E-68 T 22-04-2016 LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 Pfam PF00288 GHMP kinases N terminal domain 87 135 9.9E-7 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 Gene3D G3DSA:3.30.70.890 176 315 5.5E-39 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 7 297 1.0E-86 T 22-04-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 PANTHER PTHR10977 8 302 2.7E-80 T 22-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 SUPERFAMILY SSF55060 170 303 1.37E-32 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 PANTHER PTHR10977:SF3 8 302 2.7E-80 T 22-04-2016 LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 PIRSF PIRSF015950 1 317 4.9E-101 T 22-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 Gene3D G3DSA:3.30.230.10 4 163 3.0E-59 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 SUPERFAMILY SSF54211 7 163 5.69E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS06050 f37349da4a90860e88a5db94f78a2d19 318 Pfam PF08544 GHMP kinases C terminal 213 298 3.1E-4 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain LMES_RS01970 88ad1bcd297210fcb0ab7490a714b510 266 Gene3D G3DSA:3.40.50.300 1 227 3.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01970 88ad1bcd297210fcb0ab7490a714b510 266 ProSitePatterns PS00211 ABC transporters family signature. 117 131 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01970 88ad1bcd297210fcb0ab7490a714b510 266 PANTHER PTHR24220 3 209 1.3E-53 T 22-04-2016 LMES_RS01970 88ad1bcd297210fcb0ab7490a714b510 266 Pfam PF00005 ABC transporter 21 144 2.6E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01970 88ad1bcd297210fcb0ab7490a714b510 266 SUPERFAMILY SSF52540 2 211 5.69E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01970 88ad1bcd297210fcb0ab7490a714b510 266 SMART SM00382 26 202 4.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01155 aa2586bd80a4e37e4b73cc2bf989af97 512 Pfam PF12698 ABC-2 family transporter protein 19 181 4.6E-10 T 22-04-2016 LMES_RS07255 58a10acdc23c4241fcf8a562dd0cf6d6 158 Gene3D G3DSA:1.10.10.10 11 141 5.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07255 58a10acdc23c4241fcf8a562dd0cf6d6 158 Pfam PF12802 MarR family 35 92 6.1E-7 T 22-04-2016 LMES_RS07255 58a10acdc23c4241fcf8a562dd0cf6d6 158 SMART SM00347 27 128 8.6E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS07255 58a10acdc23c4241fcf8a562dd0cf6d6 158 SUPERFAMILY SSF46785 8 143 8.54E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07255 58a10acdc23c4241fcf8a562dd0cf6d6 158 PANTHER PTHR33164 11 152 2.1E-14 T 22-04-2016 LMES_RS04570 84b6edcea5da93e378b692167937e169 155 SUPERFAMILY SSF46785 6 121 1.16E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04570 84b6edcea5da93e378b692167937e169 155 PANTHER PTHR33164:SF5 4 154 5.0E-18 T 22-04-2016 LMES_RS04570 84b6edcea5da93e378b692167937e169 155 SMART SM00347 28 128 2.2E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04570 84b6edcea5da93e378b692167937e169 155 Gene3D G3DSA:1.10.10.10 3 148 2.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04570 84b6edcea5da93e378b692167937e169 155 Pfam PF01047 MarR family 35 92 6.7E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04570 84b6edcea5da93e378b692167937e169 155 PANTHER PTHR33164 4 154 5.0E-18 T 22-04-2016 LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 6 186 9.5E-44 T 22-04-2016 IPR004466 Ribonuclease M5 GO:0043822 LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 Pfam PF13662 Toprim domain 9 76 6.3E-8 T 22-04-2016 IPR006171 Toprim domain LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 Hamap MF_01469 Ribonuclease M5 [rnmV]. 7 188 28.951 T 22-04-2016 IPR004466 Ribonuclease M5 GO:0043822 LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 Pfam PF13331 Domain of unknown function (DUF4093) 99 185 8.5E-25 T 22-04-2016 IPR025156 Ribonuclease M5, C-terminal domain LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 PANTHER PTHR39156 4 186 1.5E-59 T 22-04-2016 LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 Gene3D G3DSA:3.40.1360.20 6 122 1.7E-35 T 22-04-2016 LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 SUPERFAMILY SSF110455 6 122 8.89E-31 T 22-04-2016 LMES_RS07230 408d777801a029fe16ddfd279e2c527c 189 SMART SM00493 8 81 1.1E-4 T 22-04-2016 IPR006171 Toprim domain LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PRINTS PR00142 RecA protein signature 310 327 5.1E-80 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PRINTS PR00142 RecA protein signature 223 251 5.1E-80 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PRINTS PR00142 RecA protein signature 140 169 5.1E-80 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PRINTS PR00142 RecA protein signature 178 207 5.1E-80 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PRINTS PR00142 RecA protein signature 106 135 5.1E-80 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PRINTS PR00142 RecA protein signature 256 285 5.1E-80 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 Gene3D G3DSA:3.40.50.300 42 280 1.9E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 SUPERFAMILY SSF54752 281 341 4.45E-17 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 Gene3D G3DSA:3.30.250.10 281 341 6.0E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 SUPERFAMILY SSF52540 18 280 5.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 ProSitePatterns PS00321 recA signature. 226 234 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 Hamap MF_00268 Protein RecA [recA]. 18 344 49.846 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 SMART SM00382 70 241 5.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 18 338 9.4E-161 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 Pfam PF00154 recA bacterial DNA recombination protein 21 281 6.0E-137 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PANTHER PTHR22942 12 350 8.5E-187 T 22-04-2016 LMES_RS02805 f584bc9869ffbed25a365586981a8e9d 385 PANTHER PTHR22942:SF1 12 350 8.5E-187 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 SMART SM00739 134 161 1.9E-6 T 22-04-2016 IPR005824 KOW LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 186 1.0E-48 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 SUPERFAMILY SSF50104 127 186 2.19E-14 T 22-04-2016 IPR008991 Translation protein SH3-like domain LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 Pfam PF02357 Transcription termination factor nusG 7 119 2.9E-21 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.2E-13 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 PRINTS PR00338 Transcription termination factor NUSG signature 164 180 1.2E-13 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 PRINTS PR00338 Transcription termination factor NUSG signature 146 161 1.2E-13 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 SUPERFAMILY SSF82679 6 124 6.28E-33 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 188 24.115 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 Pfam PF00467 KOW motif 137 167 4.9E-8 T 22-04-2016 IPR005824 KOW LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 SMART SM00738 6 123 1.9E-37 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 Gene3D G3DSA:3.30.70.940 6 124 1.5E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 PANTHER PTHR30265 3 186 1.0E-57 T 22-04-2016 LMES_RS01240 474371fabcb301d5bf717ccdf38bd713 192 Gene3D G3DSA:2.30.30.30 128 186 2.1E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 174 1.8E-46 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 PANTHER PTHR21343:SF0 1 213 4.2E-61 T 22-04-2016 LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 Pfam PF13500 AAA domain 5 210 1.5E-44 T 22-04-2016 LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 PIRSF PIRSF006755 2 224 7.2E-60 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 212 27.024 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 SUPERFAMILY SSF52540 1 213 3.49E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 Gene3D G3DSA:3.40.50.300 2 209 2.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01420 4342b0ba3903aa6799ecd9a4e73ad16a 225 PANTHER PTHR21343 1 213 4.2E-61 T 22-04-2016 LMES_RS05650 9a54a66956624de009d0b2d154128ea4 287 SUPERFAMILY SSF50249 151 217 1.46E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05650 9a54a66956624de009d0b2d154128ea4 287 Gene3D G3DSA:2.40.50.140 86 109 2.1E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05650 9a54a66956624de009d0b2d154128ea4 287 Gene3D G3DSA:2.40.50.140 183 217 2.1E-4 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS05650 9a54a66956624de009d0b2d154128ea4 287 PIRSF PIRSF012524 1 286 6.1E-91 T 22-04-2016 IPR014464 Conserved virulence factor B LMES_RS05650 9a54a66956624de009d0b2d154128ea4 287 Pfam PF13509 S1 domain 5 63 1.8E-12 T 22-04-2016 LMES_RS05650 9a54a66956624de009d0b2d154128ea4 287 PANTHER PTHR37296 2 287 6.5E-82 T 22-04-2016 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 Pfam PF00119 ATP synthase A chain 21 235 2.3E-52 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 236 8.2E-43 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 PANTHER PTHR11410 5 236 6.3E-55 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 Gene3D G3DSA:1.20.120.220 70 236 2.8E-39 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 PRINTS PR00123 ATP synthase A subunit signature 221 236 4.0E-16 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 PRINTS PR00123 ATP synthase A subunit signature 164 186 4.0E-16 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 PRINTS PR00123 ATP synthase A subunit signature 78 94 4.0E-16 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 SUPERFAMILY SSF81336 70 235 2.35E-35 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 241 13.203 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 PANTHER PTHR11410:SF7 5 236 6.3E-55 T 22-04-2016 LMES_RS08425 09c0ac8cc3a84b826099f2dce28ebef9 241 ProSitePatterns PS00449 ATP synthase a subunit signature. 167 176 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 PANTHER PTHR11014 6 420 2.1E-192 T 22-04-2016 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 SUPERFAMILY SSF53187 4 193 2.43E-58 T 22-04-2016 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 SUPERFAMILY SSF53187 333 415 2.43E-58 T 22-04-2016 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 SUPERFAMILY SSF55031 211 304 2.44E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 Pfam PF07687 Peptidase dimerisation domain 184 305 1.8E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 Pfam PF01546 Peptidase family M20/M25/M40 82 413 5.1E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 Gene3D G3DSA:3.40.630.10 357 417 1.3E-59 T 22-04-2016 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 Gene3D G3DSA:3.40.630.10 12 205 1.3E-59 T 22-04-2016 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 Gene3D G3DSA:3.30.70.360 211 304 2.3E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 PANTHER PTHR11014:SF117 6 420 2.1E-192 T 22-04-2016 LMES_RS04785 6a08088dac60d63e83ba736d189b7fd9 421 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 19 404 1.3E-106 T 22-04-2016 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GO:0016813 LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 236 399 2.9E-16 T 22-04-2016 IPR004477 ComEC/Rec2-related protein LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 SUPERFAMILY SSF56281 491 744 1.31E-35 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 Pfam PF00753 Metallo-beta-lactamase superfamily 494 588 4.5E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 PANTHER PTHR30619:SF2 7 746 4.1E-95 T 22-04-2016 LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 PANTHER PTHR30619 7 746 4.1E-95 T 22-04-2016 LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 Gene3D G3DSA:3.60.15.10 485 720 1.2E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 133 732 3.6E-67 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 LMES_RS07100 cbad705e5d4e4c20d4f68dc3020db98d 760 Pfam PF03772 Competence protein 214 455 1.2E-28 T 22-04-2016 IPR004477 ComEC/Rec2-related protein LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 PRINTS PR00421 Thioredoxin family signature 67 78 2.7E-6 T 22-04-2016 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 PRINTS PR00421 Thioredoxin family signature 28 37 2.7E-6 T 22-04-2016 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 PRINTS PR00421 Thioredoxin family signature 20 28 2.7E-6 T 22-04-2016 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 SUPERFAMILY SSF52833 3 103 1.4E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 Pfam PF00085 Thioredoxin 3 101 2.8E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 PIRSF PIRSF000077 1 103 1.1E-34 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 101 2.3E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 Gene3D G3DSA:3.40.30.10 2 102 4.9E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS06670 4174af39c790546653f6f1716872b9c8 104 PANTHER PTHR10438 23 102 3.5E-31 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Gene3D G3DSA:2.10.270.10 469 537 1.1E-12 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Pfam PF13306 Leucine rich repeats (6 copies) 69 179 9.0E-21 T 22-04-2016 IPR026906 Leucine rich repeat 5 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Pfam PF13306 Leucine rich repeats (6 copies) 326 434 8.8E-17 T 22-04-2016 IPR026906 Leucine rich repeat 5 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 PANTHER PTHR11017:SF165 272 427 9.9E-40 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 PANTHER PTHR11017:SF165 464 481 9.9E-40 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 PANTHER PTHR11017:SF165 41 212 9.9E-40 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 PANTHER PTHR11017 272 427 9.9E-40 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 PANTHER PTHR11017 464 481 9.9E-40 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 PANTHER PTHR11017 41 212 9.9E-40 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Pfam PF01473 Putative cell wall binding repeat 474 492 0.34 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Pfam PF01473 Putative cell wall binding repeat 500 511 0.068 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Gene3D G3DSA:3.80.10.10 317 392 2.2E-4 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 Gene3D G3DSA:3.80.10.10 74 222 2.2E-4 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 SUPERFAMILY SSF69360 471 537 7.98E-17 T 22-04-2016 LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 SUPERFAMILY SSF52058 76 218 1.36E-7 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LMES_RS08545 a266c1d260ded8ebcbea01cf63c7cd06 538 SUPERFAMILY SSF52058 313 399 1.36E-7 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 PANTHER PTHR11803:SF13 1 129 7.5E-46 T 22-04-2016 LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 Pfam PF01042 Endoribonuclease L-PSP 9 129 2.5E-43 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 130 1.5E-51 T 22-04-2016 IPR006056 RidA family LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 SUPERFAMILY SSF55298 1 130 3.77E-39 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 Gene3D G3DSA:3.30.1330.40 3 129 3.8E-41 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 106 126 - T 22-04-2016 IPR019897 RidA, conserved site LMES_RS08835 3d8522dc0df7d469916abaf24863c6e5 130 PANTHER PTHR11803 1 129 7.5E-46 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 PANTHER PTHR18895:SF3 4 293 1.0E-68 T 22-04-2016 LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 5 293 1.5E-78 T 22-04-2016 LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 6 293 31.549 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 6 286 4.5E-64 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 PIRSF PIRSF000401 4 294 4.1E-85 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 PANTHER PTHR18895 4 293 1.0E-68 T 22-04-2016 LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 Gene3D G3DSA:3.40.50.150 94 288 1.4E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS05220 39f9fedfac665da71829a670cb825c3a 296 SUPERFAMILY SSF53335 35 292 4.89E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03690 51b7b0da9304bfd11823f9e84429f1e7 97 PANTHER PTHR33777 1 96 4.8E-12 T 22-04-2016 LMES_RS03690 51b7b0da9304bfd11823f9e84429f1e7 97 Pfam PF01910 Thiamine-binding protein 6 96 8.0E-17 T 22-04-2016 IPR002767 Thiamine-binding protein LMES_RS03690 51b7b0da9304bfd11823f9e84429f1e7 97 SUPERFAMILY SSF89957 1 96 1.96E-24 T 22-04-2016 IPR029756 MTH1187/YkoF-like LMES_RS03690 51b7b0da9304bfd11823f9e84429f1e7 97 Gene3D G3DSA:3.30.70.930 3 97 1.7E-32 T 22-04-2016 IPR029756 MTH1187/YkoF-like LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 PANTHER PTHR31760 6 238 2.0E-84 T 22-04-2016 LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 201 7.9E-51 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 SUPERFAMILY SSF53335 6 238 1.52E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 216 27.801 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 Gene3D G3DSA:3.40.50.150 4 238 6.7E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 PANTHER PTHR31760:SF0 6 238 2.0E-84 T 22-04-2016 LMES_RS01620 812d3644dd20f24fe8eaf574fc67fa75 239 Pfam PF02527 rRNA small subunit methyltransferase G 22 198 3.1E-52 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 PANTHER PTHR11122:SF14 193 257 1.6E-39 T 22-04-2016 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 PANTHER PTHR11122:SF14 9 172 1.6E-39 T 22-04-2016 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 PANTHER PTHR11122 193 257 1.6E-39 T 22-04-2016 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 PANTHER PTHR11122 9 172 1.6E-39 T 22-04-2016 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 Pfam PF01263 Aldose 1-epimerase 2 288 7.0E-29 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 SUPERFAMILY SSF74650 1 291 8.9E-55 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LMES_RS05165 6ea3be8190ce4bc8001a1d2ae0c1d3fc 292 Gene3D G3DSA:2.70.98.10 2 291 1.5E-25 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 Pfam PF11799 impB/mucB/samB family C-terminal domain 264 377 1.3E-17 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 Pfam PF11798 IMS family HHH motif 190 222 3.8E-7 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 SUPERFAMILY SSF56672 17 259 7.56E-52 T 22-04-2016 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 Gene3D G3DSA:3.30.1490.100 268 377 4.0E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 Gene3D G3DSA:1.10.150.20 188 261 1.2E-22 T 22-04-2016 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 Gene3D G3DSA:3.30.70.270 84 179 1.1E-18 T 22-04-2016 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 SUPERFAMILY SSF100879 267 370 2.16E-9 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 PANTHER PTHR11076:SF31 1 384 1.2E-103 T 22-04-2016 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 Pfam PF00817 impB/mucB/samB family 22 174 2.4E-25 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS04750 8105229c35eded2e589d8e56ba997c82 440 PANTHER PTHR11076 1 384 1.2E-103 T 22-04-2016 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 PANTHER PTHR33796 2 196 3.2E-62 T 22-04-2016 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 194 3.2E-48 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Gene3D G3DSA:1.10.8.10 149 194 6.0E-11 T 22-04-2016 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Gene3D G3DSA:2.40.50.140 1 61 1.5E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 SMART SM00278 106 125 0.51 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 SMART SM00278 71 90 0.059 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Pfam PF01330 RuvA N terminal domain 1 60 4.2E-13 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 SUPERFAMILY SSF50249 1 61 3.48E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 SUPERFAMILY SSF46929 149 194 7.46E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Pfam PF14520 Helix-hairpin-helix domain 70 127 4.7E-15 T 22-04-2016 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 28.307 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Gene3D G3DSA:1.10.150.20 65 141 4.4E-30 T 22-04-2016 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 SUPERFAMILY SSF47781 64 134 1.38E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LMES_RS02960 d98f368e0518e87b5be129c18c0b5d55 196 Pfam PF07499 RuvA, C-terminal domain 151 194 2.4E-10 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 Pfam PF00005 ABC transporter 18 155 1.3E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 PANTHER PTHR24220:SF573 4 297 5.5E-51 T 22-04-2016 LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 SMART SM00382 27 205 2.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 PANTHER PTHR24220 4 297 5.5E-51 T 22-04-2016 LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 Gene3D G3DSA:3.40.50.300 5 214 8.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00250 76ee132040151d7b3529ccb8c8f04186 301 SUPERFAMILY SSF52540 3 207 1.23E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 Pfam PF13347 MFS/sugar transport protein 10 452 8.7E-96 T 22-04-2016 LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 Gene3D G3DSA:1.20.1250.20 246 458 1.0E-13 T 22-04-2016 LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 Gene3D G3DSA:1.20.1250.20 13 224 7.3E-7 T 22-04-2016 LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 SUPERFAMILY SSF103473 12 456 8.63E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 PANTHER PTHR11328 5 467 1.0E-44 T 22-04-2016 LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 68 93 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LMES_RS05710 5b39d34c3a601f50f50ad6284bbe141a 470 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 464 5.9E-130 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-38 T 22-04-2016 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 PANTHER PTHR26402:SF405 2 219 1.7E-67 T 22-04-2016 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 SMART SM00862 146 220 1.1E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 PANTHER PTHR26402 2 219 1.7E-67 T 22-04-2016 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 Gene3D G3DSA:1.10.10.10 126 220 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 219 3.3E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 SUPERFAMILY SSF52172 1 179 4.27E-40 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS04620 f2f37e379e6e40aeacebec35762706a8 223 SMART SM00448 2 113 3.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 Gene3D G3DSA:3.40.50.300 3 236 3.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 SMART SM00382 30 222 4.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 PANTHER PTHR24220 8 249 6.0E-91 T 22-04-2016 LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 Pfam PF00005 ABC transporter 21 172 1.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 SUPERFAMILY SSF52540 4 235 6.46E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS08860 d860c0474adc0454ec2803579560b83e 263 PANTHER PTHR24220:SF383 8 249 6.0E-91 T 22-04-2016 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 PANTHER PTHR11808:SF15 4 369 1.6E-154 T 22-04-2016 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 364 1.7E-116 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 Gene3D G3DSA:3.90.1150.10 281 365 1.6E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 Gene3D G3DSA:3.90.1150.10 249 280 9.3E-5 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 PIRSF PIRSF001434 2 368 1.1E-113 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 SUPERFAMILY SSF53383 28 365 8.58E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 PANTHER PTHR11808 4 369 1.6E-154 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 Gene3D G3DSA:3.40.640.10 5 248 2.9E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS08100 1e051c310beff641ba7f509ae5c9a37f 369 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 Pfam PF00005 ABC transporter 17 165 7.3E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 PANTHER PTHR24220 3 240 1.6E-130 T 22-04-2016 LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 PANTHER PTHR24220:SF327 3 240 1.6E-130 T 22-04-2016 LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 SMART SM00382 26 213 9.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 SUPERFAMILY SSF52540 1 235 7.23E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 PIRSF PIRSF039085 1 240 1.1E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS05445 492fc513bcb195196c36127b46921a8e 240 Gene3D G3DSA:3.40.50.300 1 236 5.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 SUPERFAMILY SSF53633 6 260 3.27E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 Gene3D G3DSA:3.40.1160.10 5 259 5.5E-52 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PANTHER PTHR11063:SF12 1 259 1.0E-71 T 22-04-2016 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PIRSF PIRSF000729 1 262 1.9E-83 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 Pfam PF00696 Amino acid kinase family 6 238 1.4E-36 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 260 1.9E-80 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 262 33.088 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PANTHER PTHR11063 1 259 1.0E-71 T 22-04-2016 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.5E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.5E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.5E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.5E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 1.5E-47 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LMES_RS01370 dbf3b1048d0ffdfdc90511e38b438ebb 262 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 PANTHER PTHR13734 16 350 1.8E-73 T 22-04-2016 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 Gene3D G3DSA:3.30.460.10 13 147 2.3E-46 T 22-04-2016 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 174 234 4.0E-16 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 Hamap MF_01263 CCA-adding enzyme [cca]. 7 397 37.303 T 22-04-2016 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 Gene3D G3DSA:1.10.3090.10 148 364 6.3E-41 T 22-04-2016 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 Pfam PF01743 Poly A polymerase head domain 27 147 2.3E-38 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 SUPERFAMILY SSF81301 12 143 4.25E-42 T 22-04-2016 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 SUPERFAMILY SSF81891 145 399 4.32E-50 T 22-04-2016 LMES_RS03630 c74649d9c592ef6b78b0984569e690d7 401 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 248 393 1.5E-36 T 22-04-2016 IPR032810 CCA-adding enzyme, C-terminal LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 SMART SM00829 28 351 1.5E-10 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 SUPERFAMILY SSF51735 134 289 1.29E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 Gene3D G3DSA:3.90.180.10 19 177 7.3E-33 T 22-04-2016 IPR011032 GroES-like LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 168 189 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 20 351 3.2E-94 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 Pfam PF13602 Zinc-binding dehydrogenase 211 351 4.5E-19 T 22-04-2016 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 PANTHER PTHR11695 36 356 6.3E-82 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 PANTHER PTHR11695:SF558 36 356 6.3E-82 T 22-04-2016 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 49 106 1.3E-7 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 SUPERFAMILY SSF50129 32 157 4.26E-30 T 22-04-2016 IPR011032 GroES-like LMES_RS05225 d42046da74f3732a7ca13946b2d8effb 356 Gene3D G3DSA:3.40.50.720 178 285 7.1E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 SUPERFAMILY SSF50104 3 64 4.45E-21 T 22-04-2016 IPR008991 Translation protein SH3-like domain LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 SMART SM01185 68 122 9.7E-23 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Gene3D G3DSA:2.30.30.30 2 64 8.9E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 PANTHER PTHR30053 1 186 9.4E-85 T 22-04-2016 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 2.7E-24 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 SMART SM00841 130 185 6.9E-31 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 4.2E-19 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 SUPERFAMILY SSF50249 66 127 4.71E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 5.2E-27 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Gene3D G3DSA:2.40.50.140 65 127 1.5E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Hamap MF_00141 Elongation factor P [efp]. 2 186 47.347 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 SUPERFAMILY SSF50249 129 186 1.63E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 Gene3D G3DSA:2.40.50.140 129 186 3.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 2.7E-74 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 LMES_RS07250 40e5fb10f3bf2d61c1ee9dfe96f08f86 186 PIRSF PIRSF005901 1 186 1.7E-65 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 TIGRFAM TIGR01499 folC: bifunctional protein FolC 38 436 3.6E-94 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 SUPERFAMILY SSF53623 18 303 6.54E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 SUPERFAMILY SSF53244 306 437 3.2E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 Gene3D G3DSA:3.40.1190.10 13 303 4.3E-74 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 Pfam PF08245 Mur ligase middle domain 57 276 6.3E-9 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 55 78 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 Gene3D G3DSA:3.90.190.20 306 437 6.1E-26 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 PIRSF PIRSF001563 8 439 5.5E-104 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LMES_RS03520 cca9fea203c50f25606242f8eb251a1b 441 PANTHER PTHR11136 39 435 1.2E-91 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 Pfam PF13641 Glycosyltransferase like family 2 98 325 4.9E-33 T 22-04-2016 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 Gene3D G3DSA:3.90.550.10 98 336 1.1E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PANTHER PTHR10587 25 539 2.1E-50 T 22-04-2016 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PANTHER PTHR10587:SF94 25 539 2.1E-50 T 22-04-2016 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PRINTS PR01439 Cellulose synthase subunit A signature 107 126 6.0E-15 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PRINTS PR01439 Cellulose synthase subunit A signature 418 437 6.0E-15 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PRINTS PR01439 Cellulose synthase subunit A signature 23 43 6.0E-15 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PRINTS PR01439 Cellulose synthase subunit A signature 51 76 6.0E-15 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PRINTS PR01439 Cellulose synthase subunit A signature 349 375 6.0E-15 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 PRINTS PR01439 Cellulose synthase subunit A signature 458 482 6.0E-15 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 LMES_RS06945 32df38bb1fbabde153c26b3eec98339e 650 SUPERFAMILY SSF53448 97 392 1.91E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 Gene3D G3DSA:1.10.10.10 1 81 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 Gene3D G3DSA:3.40.190.10 201 264 2.4E-13 T 22-04-2016 LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 Pfam PF03466 LysR substrate binding domain 87 295 5.6E-26 T 22-04-2016 IPR005119 LysR, substrate-binding LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 Gene3D G3DSA:3.40.190.10 82 200 1.7E-15 T 22-04-2016 LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 PANTHER PTHR30346:SF2 1 299 1.9E-48 T 22-04-2016 LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 SUPERFAMILY SSF46785 1 111 2.2E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 PANTHER PTHR30346 1 299 1.9E-48 T 22-04-2016 LMES_RS04035 5794461a8134da5e2ae38101fab5f889 304 SUPERFAMILY SSF53850 87 298 5.34E-26 T 22-04-2016 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 PANTHER PTHR21708 1 318 2.0E-41 T 22-04-2016 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 PANTHER PTHR21708:SF24 1 318 2.0E-41 T 22-04-2016 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 313 5.6E-50 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 311 1.1E-24 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 Gene3D G3DSA:1.10.1040.10 193 316 7.1E-30 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 SUPERFAMILY SSF48179 184 313 3.4E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 147 3.0E-21 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LMES_RS01195 67237d619bcdb73397573d63bd302984 331 SUPERFAMILY SSF51735 1 127 1.93E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01195 67237d619bcdb73397573d63bd302984 331 Gene3D G3DSA:3.40.50.720 1 192 3.2E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 308 1.4E-103 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PANTHER PTHR11735:SF6 2 329 5.7E-131 T 22-04-2016 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 Gene3D G3DSA:3.30.420.40 3 159 6.9E-43 T 22-04-2016 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 SUPERFAMILY SSF53067 102 310 5.95E-45 T 22-04-2016 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 ProSitePatterns PS01016 Glycoprotease family signature. 97 117 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 333 54.772 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 Pfam PF00814 Glycoprotease family 25 308 1.2E-96 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 315 8.7E-124 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PANTHER PTHR11735 2 329 5.7E-131 T 22-04-2016 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 SUPERFAMILY SSF53067 4 121 1.79E-28 T 22-04-2016 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.0E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.0E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 5.0E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 5.0E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 5.0E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS07955 1ad6a189e944c99a0b876692d97d1019 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 5.0E-43 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LMES_RS05905 ec8cc737f6961b78baae5f0015612dbd 98 Gene3D G3DSA:3.30.1230.10 1 93 1.0E-32 T 22-04-2016 IPR007393 Domain of unknown function DUF448 LMES_RS05905 ec8cc737f6961b78baae5f0015612dbd 98 Pfam PF04296 Protein of unknown function (DUF448) 9 82 5.6E-25 T 22-04-2016 IPR007393 Domain of unknown function DUF448 LMES_RS05905 ec8cc737f6961b78baae5f0015612dbd 98 SUPERFAMILY SSF64376 4 94 5.89E-31 T 22-04-2016 IPR007393 Domain of unknown function DUF448 LMES_RS05905 ec8cc737f6961b78baae5f0015612dbd 98 PANTHER PTHR34215:SF1 1 98 4.2E-26 T 22-04-2016 LMES_RS05905 ec8cc737f6961b78baae5f0015612dbd 98 PANTHER PTHR34215 1 98 4.2E-26 T 22-04-2016 LMES_RS06235 7a7a9945dfdfc04027d2f3457dfdeeaa 197 Gene3D G3DSA:2.60.120.10 17 192 2.4E-54 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LMES_RS06235 7a7a9945dfdfc04027d2f3457dfdeeaa 197 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 11 195 3.0E-91 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LMES_RS06235 7a7a9945dfdfc04027d2f3457dfdeeaa 197 PANTHER PTHR21047 2 192 2.2E-38 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LMES_RS06235 7a7a9945dfdfc04027d2f3457dfdeeaa 197 SUPERFAMILY SSF51182 17 191 3.56E-51 T 22-04-2016 IPR011051 RmlC-like cupin domain LMES_RS06235 7a7a9945dfdfc04027d2f3457dfdeeaa 197 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 17 188 2.2E-39 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 166 261 2.3E-16 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 SUPERFAMILY SSF55957 365 452 7.98E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 PANTHER PTHR22573 7 454 4.6E-163 T 22-04-2016 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Gene3D G3DSA:3.40.120.10 258 375 1.4E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Gene3D G3DSA:3.30.310.50 377 451 2.2E-22 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 5 452 43.684 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 2.7E-7 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 256 2.7E-7 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 SUPERFAMILY SSF53738 165 264 1.37E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Gene3D G3DSA:3.40.120.10 7 153 1.1E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Gene3D G3DSA:3.40.120.10 183 257 4.4E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 9 451 1.7E-177 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 381 449 8.8E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 PANTHER PTHR22573:SF15 7 454 4.6E-163 T 22-04-2016 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 SUPERFAMILY SSF53738 5 187 5.1E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 SUPERFAMILY SSF53738 265 372 2.47E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 143 3.1E-43 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS06995 54c225098abd40af9aa679e5ac92af99 455 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 265 371 2.4E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 SMART SM00382 26 412 1.3 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 SMART SM00382 476 736 0.049 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:1.10.8.280 155 257 5.2E-7 T 22-04-2016 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:3.40.50.300 638 749 3.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:3.40.50.300 326 441 4.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:3.40.50.300 7 62 4.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:3.40.50.300 457 515 3.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Pfam PF00005 ABC transporter 468 675 2.7E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 PANTHER PTHR32282 3 750 3.2E-292 T 22-04-2016 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 PANTHER PTHR32282:SF10 3 750 3.2E-292 T 22-04-2016 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 SUPERFAMILY SSF52540 457 727 2.31E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:1.20.1580.10 258 325 9.8E-36 T 22-04-2016 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:1.20.1580.10 94 154 9.8E-36 T 22-04-2016 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 Gene3D G3DSA:1.20.1580.10 519 637 2.0E-41 T 22-04-2016 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 ProSitePatterns PS00211 ABC transporters family signature. 647 661 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 SUPERFAMILY SSF52540 279 417 3.68E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04245 6b7143ac90bf3ce42c12181c1f7554e2 750 SUPERFAMILY SSF52540 13 154 3.68E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07875 64498866e520a9cf22cd7db8d14646e7 147 Pfam PF11694 Protein of unknown function (DUF3290) 2 145 5.4E-50 T 22-04-2016 IPR021707 Protein of unknown function DUF3290 LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 SMART SM00418 5 83 5.8E-16 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 Pfam PF12840 Helix-turn-helix domain 6 59 6.6E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.2E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.2E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.2E-8 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 PANTHER PTHR33154 1 81 1.1E-15 T 22-04-2016 LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 SUPERFAMILY SSF46785 2 85 3.54E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01540 18d58bf10bf8458d955051bd0f790285 88 Gene3D G3DSA:1.10.10.10 3 85 7.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 Gene3D G3DSA:3.30.70.260 138 202 1.0E-24 T 22-04-2016 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 PANTHER PTHR11934 8 226 1.6E-80 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 Gene3D G3DSA:3.40.50.1360 7 137 3.9E-52 T 22-04-2016 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 SUPERFAMILY SSF75445 126 205 4.71E-24 T 22-04-2016 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 SUPERFAMILY SSF100950 7 145 5.44E-42 T 22-04-2016 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 216 1.2E-72 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 4 221 29.889 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS03815 512dc64176ad87e14134f9d13575211c 231 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 216 4.7E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 347 9.4E-130 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 PANTHER PTHR11835 1 356 6.1E-164 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 Gene3D G3DSA:3.40.718.10 5 350 2.8E-114 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 SMART SM01329 6 344 6.6E-161 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 347 1.0E-114 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 PANTHER PTHR11835:SF35 1 356 6.1E-164 T 22-04-2016 LMES_RS09205 61eb25eb85a3ca04e63968d4215aeba2 357 SUPERFAMILY SSF53659 6 348 1.54E-108 T 22-04-2016 LMES_RS03855 6c84a3b9b3f69f43d6e56f021bd619d0 283 SUPERFAMILY SSF51569 13 262 7.14E-90 T 22-04-2016 LMES_RS03855 6c84a3b9b3f69f43d6e56f021bd619d0 283 PANTHER PTHR21057 14 281 3.4E-131 T 22-04-2016 LMES_RS03855 6c84a3b9b3f69f43d6e56f021bd619d0 283 Pfam PF00793 DAHP synthetase I family 14 266 7.7E-60 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LMES_RS03855 6c84a3b9b3f69f43d6e56f021bd619d0 283 PANTHER PTHR21057:SF2 14 281 3.4E-131 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LMES_RS03855 6c84a3b9b3f69f43d6e56f021bd619d0 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 17 262 1.6E-107 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LMES_RS03855 6c84a3b9b3f69f43d6e56f021bd619d0 283 Gene3D G3DSA:3.20.20.70 16 264 3.9E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 30 430 9.4E-105 T 22-04-2016 IPR010071 Amino acid adenylation domain LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Pfam PF00501 AMP-binding enzyme 13 406 3.9E-85 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Gene3D G3DSA:3.40.50.980 155 320 2.0E-36 T 22-04-2016 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Pfam PF13193 AMP-binding enzyme C-terminal domain 415 495 6.8E-6 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Gene3D G3DSA:3.40.50.980 4 154 5.6E-34 T 22-04-2016 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 507 257.782 T 22-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 4 506 8.0E-218 T 22-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Gene3D G3DSA:3.30.300.30 401 504 2.9E-26 T 22-04-2016 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 PANTHER PTHR24095 4 495 2.3E-158 T 22-04-2016 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 Gene3D G3DSA:2.30.38.10 322 400 1.3E-20 T 22-04-2016 LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 22-04-2016 IPR020845 AMP-binding, conserved site LMES_RS08160 0c21b94ef1b3bbfd7ee461e6eb144c6e 509 SUPERFAMILY SSF56801 5 506 2.22E-120 T 22-04-2016 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 PANTHER PTHR10937:SF0 1 601 4.2E-249 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 1.3E-194 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 Gene3D G3DSA:3.40.50.10490 248 440 1.1E-48 T 22-04-2016 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 PANTHER PTHR10937 1 601 4.2E-249 T 22-04-2016 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 Pfam PF01380 SIS domain 295 420 1.8E-26 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 Pfam PF01380 SIS domain 458 582 1.6E-18 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 SUPERFAMILY SSF56235 2 240 3.09E-62 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 Gene3D G3DSA:3.60.20.10 2 243 1.5E-65 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 Gene3D G3DSA:3.40.50.10490 441 600 4.0E-51 T 22-04-2016 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 Pfam PF13522 Glutamine amidotransferase domain 64 196 9.3E-19 T 22-04-2016 LMES_RS03285 6e95f855694bbcbddc154fd2c0cca404 601 SUPERFAMILY SSF53697 249 600 9.61E-83 T 22-04-2016 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 Gene3D G3DSA:1.10.3130.10 6 62 3.0E-19 T 22-04-2016 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 PANTHER PTHR23416 6 164 7.1E-66 T 22-04-2016 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 SUPERFAMILY SSF51161 8 164 3.19E-50 T 22-04-2016 IPR011004 Trimeric LpxA-like LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 PANTHER PTHR23416:SF55 6 164 7.1E-66 T 22-04-2016 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 Gene3D G3DSA:2.160.10.10 64 163 1.2E-31 T 22-04-2016 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 PIRSF PIRSF000441 4 164 9.0E-63 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 122 150 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LMES_RS05585 cfcd10376850d3287a537ca90a293622 164 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 113 147 5.3E-9 T 22-04-2016 IPR001451 Hexapeptide repeat LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 PIRSF PIRSF039085 1 244 5.2E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 SMART SM00382 28 216 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 PANTHER PTHR24220:SF474 5 242 1.8E-136 T 22-04-2016 LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 Pfam PF00005 ABC transporter 19 167 9.9E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 Gene3D G3DSA:3.40.50.300 2 240 2.7E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 SUPERFAMILY SSF52540 3 238 5.69E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08740 d120b3a3407dbc41f03901f66497d5bb 245 PANTHER PTHR24220 5 242 1.8E-136 T 22-04-2016 LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 253 3.8E-61 T 22-04-2016 LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PANTHER PTHR24322:SF513 17 145 5.4E-49 T 22-04-2016 LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PANTHER PTHR24322:SF513 161 193 5.4E-49 T 22-04-2016 LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 SUPERFAMILY SSF51735 12 255 1.47E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PANTHER PTHR24322 17 145 5.4E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PANTHER PTHR24322 161 193 5.4E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 7.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 7.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 7.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 7.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 7.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.3E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 Gene3D G3DSA:3.40.50.720 8 255 2.6E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS04450 d95403c287a29e42502ad52f50a80a66 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 PANTHER PTHR41262 2 1115 9.5E-142 T 22-04-2016 LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 Gene3D G3DSA:3.40.50.300 308 394 3.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 SUPERFAMILY SSF52540 310 715 1.31E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 PANTHER PTHR41262:SF1 2 1115 9.5E-142 T 22-04-2016 LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 317 420 7.0E-8 T 22-04-2016 LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 3 1158 41.669 T 22-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 LMES_RS06545 26b2e714907c13b627a46bf8115c5b7f 1159 Pfam PF12705 PD-(D/E)XK nuclease superfamily 797 1116 1.3E-29 T 22-04-2016 LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 SUPERFAMILY SSF46785 8 79 2.76E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 SMART SM00881 80 181 1.0E-16 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 Gene3D G3DSA:3.40.50.720 79 209 8.4E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 PANTHER PTHR35786:SF1 1 216 4.1E-102 T 22-04-2016 LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 Pfam PF02629 CoA binding domain 85 180 6.8E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 PANTHER PTHR35786 1 216 4.1E-102 T 22-04-2016 LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 SUPERFAMILY SSF51735 84 207 2.17E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 Gene3D G3DSA:1.10.10.10 6 76 5.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 Pfam PF06971 Putative DNA-binding protein N-terminus 6 54 2.0E-19 T 22-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 LMES_RS07950 3eff6ba294e1c61d5cdb3fe1ab4f1923 216 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 39.404 T 22-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 117 136 1.3E-35 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 1.3E-35 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 1.3E-35 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 1.3E-35 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 117 125 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 SUPERFAMILY SSF54919 1 136 2.36E-55 T 22-04-2016 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 Gene3D G3DSA:3.30.70.141 2 137 8.2E-59 T 22-04-2016 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 Pfam PF00334 Nucleoside diphosphate kinase 3 136 5.6E-52 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 PANTHER PTHR11349 1 136 4.1E-71 T 22-04-2016 LMES_RS07020 23d5c9bd72fca7e255ea9a91c4b6ce58 137 SMART SM00562 2 137 3.9E-67 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 PANTHER PTHR10890 1 466 3.9E-205 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 SUPERFAMILY SSF52374 3 317 1.53E-92 T 22-04-2016 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 Gene3D G3DSA:3.40.50.620 20 309 9.0E-102 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 195 213 2.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 226 247 2.3E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 468 36.937 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 Gene3D G3DSA:1.20.120.640 313 410 1.5E-21 T 22-04-2016 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 317 6.4E-125 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 SMART SM00840 356 420 2.0E-18 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 SUPERFAMILY SSF47323 321 467 3.27E-29 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 468 1.4E-163 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 LMES_RS00735 b160e7923bfa67fccdd631b11298732e 468 Pfam PF09190 DALR domain 356 411 4.9E-13 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 Pfam PF03881 Fructosamine kinase 17 278 5.9E-81 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 PANTHER PTHR12149 20 269 1.1E-65 T 22-04-2016 LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 Gene3D G3DSA:3.30.200.20 30 87 1.2E-5 T 22-04-2016 LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 PIRSF PIRSF006221 2 280 1.9E-80 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 Gene3D G3DSA:3.90.1200.10 98 257 1.9E-13 T 22-04-2016 LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 PANTHER PTHR12149:SF8 20 269 1.1E-65 T 22-04-2016 LMES_RS03195 ece4e9ce3869987de779c82dac05964b 280 SUPERFAMILY SSF56112 14 277 7.4E-46 T 22-04-2016 IPR011009 Protein kinase-like domain LMES_RS09140 c272d6ec2e86537e76cc2de7c0ebfeb7 146 PANTHER PTHR35790 33 142 2.5E-16 T 22-04-2016 LMES_RS09140 c272d6ec2e86537e76cc2de7c0ebfeb7 146 Gene3D G3DSA:1.10.10.10 4 141 9.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09140 c272d6ec2e86537e76cc2de7c0ebfeb7 146 PANTHER PTHR35790:SF1 33 142 2.5E-16 T 22-04-2016 LMES_RS09140 c272d6ec2e86537e76cc2de7c0ebfeb7 146 SUPERFAMILY SSF46785 26 142 1.75E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09140 c272d6ec2e86537e76cc2de7c0ebfeb7 146 SMART SM00347 26 129 7.9E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS09140 c272d6ec2e86537e76cc2de7c0ebfeb7 146 Pfam PF01047 MarR family 33 90 1.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 SUPERFAMILY SSF52141 3 187 1.11E-45 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 SMART SM00986 24 181 1.8E-20 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 Gene3D G3DSA:3.40.470.10 8 189 1.1E-36 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 PANTHER PTHR42160:SF1 3 191 3.9E-80 T 22-04-2016 LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 PANTHER PTHR42160 3 191 3.9E-80 T 22-04-2016 LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 Pfam PF03167 Uracil DNA glycosylase superfamily 26 180 2.4E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like LMES_RS04415 98ef1f2fc2e0112bcb1d7dbea7db62bd 191 SMART SM00987 24 181 1.8E-20 T 22-04-2016 LMES_RS02335 62e03e1097cf4bc8b7e43fea16a6b54c 246 Pfam PF06210 Protein of unknown function (DUF1003) 116 212 6.2E-37 T 22-04-2016 IPR010406 Protein of unknown function DUF1003 LMES_RS02335 62e03e1097cf4bc8b7e43fea16a6b54c 246 PANTHER PTHR41386 30 208 1.7E-38 T 22-04-2016 LMES_RS02335 62e03e1097cf4bc8b7e43fea16a6b54c 246 PANTHER PTHR41386:SF1 30 208 1.7E-38 T 22-04-2016 LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 Pfam PF00248 Aldo/keto reductase family 16 321 2.4E-76 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 143 160 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 PANTHER PTHR11732 1 236 2.6E-88 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 PANTHER PTHR11732 259 320 2.6E-88 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 SUPERFAMILY SSF51430 4 321 2.62E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 Gene3D G3DSA:3.20.20.100 3 321 3.7E-78 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.2E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.2E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS09105 cdbf18a6e19ce6f15bebee9cdcd05571 324 PRINTS PR00069 Aldo-keto reductase signature 50 74 2.2E-7 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS04375 583f8615e5857f115596244623a09262 126 SUPERFAMILY SSF55620 6 118 1.95E-16 T 22-04-2016 LMES_RS04375 583f8615e5857f115596244623a09262 126 Gene3D G3DSA:3.30.479.10 11 114 2.6E-12 T 22-04-2016 LMES_RS04375 583f8615e5857f115596244623a09262 126 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 11 119 3.0E-16 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LMES_RS04375 583f8615e5857f115596244623a09262 126 TIGRFAM TIGR03112 6_pyr_pter_rel: 6-pyruvoyl tetrahydropterin synthase-related domain 7 118 1.1E-34 T 22-04-2016 IPR017543 6-pyruvoyl tetrahydropterin synthase, predicted, bacteria LMES_RS03735 daee6021d0d1da75a2334c460c6c1f5c 330 SUPERFAMILY SSF52540 111 290 2.65E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03735 daee6021d0d1da75a2334c460c6c1f5c 330 Gene3D G3DSA:3.40.50.300 113 315 1.2E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03735 daee6021d0d1da75a2334c460c6c1f5c 330 Pfam PF02562 PhoH-like protein 112 315 6.0E-94 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 LMES_RS03735 daee6021d0d1da75a2334c460c6c1f5c 330 PANTHER PTHR30473:SF1 8 330 2.4E-151 T 22-04-2016 LMES_RS03735 daee6021d0d1da75a2334c460c6c1f5c 330 PANTHER PTHR30473 8 330 2.4E-151 T 22-04-2016 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PANTHER PTHR30075 1 685 4.5E-276 T 22-04-2016 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 683 2.1E-206 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 546 8.1E-193 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 5.3E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 5.3E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 5.3E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 5.3E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 5.3E-32 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 SUPERFAMILY SSF109604 335 498 9.77E-22 T 22-04-2016 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 682 25.071 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 PANTHER PTHR30075:SF2 1 685 4.5E-276 T 22-04-2016 LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 Gene3D G3DSA:1.10.3210.10 602 608 1.1E-6 T 22-04-2016 IPR006674 HD domain LMES_RS05245 02b21cc99af569e73ad2bd74eacbd0a4 685 Gene3D G3DSA:1.10.3210.10 338 474 1.1E-6 T 22-04-2016 IPR006674 HD domain LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 Pfam PF01966 HD domain 24 129 8.9E-8 T 22-04-2016 IPR006674 HD domain LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 SMART SM00471 19 138 8.5E-5 T 22-04-2016 IPR003607 HD/PDEase domain LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 SUPERFAMILY SSF109604 1 216 1.83E-64 T 22-04-2016 LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 Gene3D G3DSA:1.10.3210.10 185 214 2.9E-38 T 22-04-2016 IPR006674 HD domain LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 Gene3D G3DSA:1.10.3210.10 2 142 2.9E-38 T 22-04-2016 IPR006674 HD domain LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 PANTHER PTHR33594 1 217 7.1E-61 T 22-04-2016 LMES_RS01395 fd432324e56ca2b8a2592e2f9f35261e 217 PANTHER PTHR33594:SF1 1 217 7.1E-61 T 22-04-2016 LMES_RS09225 ca2d009c2a63c5d439acc7c867708044 144 SUPERFAMILY SSF82649 3 140 1.44E-40 T 22-04-2016 LMES_RS09225 ca2d009c2a63c5d439acc7c867708044 144 Pfam PF01592 NifU-like N terminal domain 10 128 3.3E-17 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 LMES_RS09225 ca2d009c2a63c5d439acc7c867708044 144 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 140 1.4E-44 T 22-04-2016 LMES_RS09225 ca2d009c2a63c5d439acc7c867708044 144 Gene3D G3DSA:3.90.1010.10 9 141 4.8E-33 T 22-04-2016 LMES_RS09225 ca2d009c2a63c5d439acc7c867708044 144 PANTHER PTHR10093 3 136 1.6E-18 T 22-04-2016 LMES_RS00205 529a54ed42a64c47364d766e0553a388 146 PANTHER PTHR13355 16 146 5.2E-30 T 22-04-2016 LMES_RS00205 529a54ed42a64c47364d766e0553a388 146 Pfam PF13673 Acetyltransferase (GNAT) domain 29 146 1.5E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS00205 529a54ed42a64c47364d766e0553a388 146 PANTHER PTHR13355:SF8 16 146 5.2E-30 T 22-04-2016 LMES_RS00205 529a54ed42a64c47364d766e0553a388 146 SUPERFAMILY SSF55729 14 146 1.38E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS00205 529a54ed42a64c47364d766e0553a388 146 Gene3D G3DSA:3.40.630.30 16 144 1.0E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 Gene3D G3DSA:3.40.50.1000 12 149 1.1E-25 T 22-04-2016 IPR023214 HAD-like domain LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 PANTHER PTHR19288 4 158 5.2E-29 T 22-04-2016 LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 137 6.2E-13 T 22-04-2016 IPR023214 HAD-like domain LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 6.1E-17 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 SUPERFAMILY SSF56784 7 142 4.57E-25 T 22-04-2016 IPR023214 HAD-like domain LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 6 165 1.1E-36 T 22-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like LMES_RS07785 990a16460ec83c7ad4f4bb36c5391fe1 178 PANTHER PTHR19288:SF25 4 158 5.2E-29 T 22-04-2016 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 PANTHER PTHR23083 186 416 3.8E-44 T 22-04-2016 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 PANTHER PTHR23083 16 148 3.8E-44 T 22-04-2016 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Pfam PF13432 Tetratricopeptide repeat 211 268 0.0029 T 22-04-2016 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Pfam PF13432 Tetratricopeptide repeat 141 198 6.1E-4 T 22-04-2016 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SUPERFAMILY SSF48452 98 415 3.79E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Pfam PF13181 Tetratricopeptide repeat 276 305 0.0062 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 102 135 78.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 34 67 170.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 206 239 1.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 240 273 5.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 342 375 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 173 203 350.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SMART SM00028 274 307 0.041 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 SUPERFAMILY SSF48452 13 119 5.06E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Gene3D G3DSA:1.25.40.10 89 188 7.3E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Gene3D G3DSA:1.25.40.10 12 88 3.1E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Pfam PF14559 Tetratricopeptide repeat 54 106 1.1E-6 T 22-04-2016 LMES_RS03625 ac05b6ea037cf448ad9f0b13da9261d7 421 Gene3D G3DSA:1.25.40.10 189 394 7.0E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LMES_RS03295 1ea7c41cee8153a0936f47e0d96d9503 264 Pfam PF01148 Cytidylyltransferase family 2 260 6.1E-69 T 22-04-2016 LMES_RS03295 1ea7c41cee8153a0936f47e0d96d9503 264 PANTHER PTHR13773:SF0 1 260 1.5E-63 T 22-04-2016 LMES_RS03295 1ea7c41cee8153a0936f47e0d96d9503 264 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 222 248 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 LMES_RS03295 1ea7c41cee8153a0936f47e0d96d9503 264 PANTHER PTHR13773 1 260 1.5E-63 T 22-04-2016 LMES_RS01430 2409f1c9c786d391f8e7dc818c3d7a29 269 Gene3D G3DSA:3.60.21.10 170 245 2.3E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS01430 2409f1c9c786d391f8e7dc818c3d7a29 269 Gene3D G3DSA:3.60.21.10 2 113 2.3E-14 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS01430 2409f1c9c786d391f8e7dc818c3d7a29 269 TIGRFAM TIGR03729 acc_ester: putative phosphoesterase 2 243 1.3E-89 T 22-04-2016 IPR022302 Phosphoesterase, putative LMES_RS01430 2409f1c9c786d391f8e7dc818c3d7a29 269 Pfam PF00149 Calcineurin-like phosphoesterase 2 184 4.8E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LMES_RS01430 2409f1c9c786d391f8e7dc818c3d7a29 269 SUPERFAMILY SSF56300 2 259 4.56E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 SUPERFAMILY SSF52540 2 227 2.22E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 PANTHER PTHR24220:SF450 3 229 6.7E-102 T 22-04-2016 LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 Pfam PF13732 Domain of unknown function (DUF4162) 211 293 8.2E-16 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 PANTHER PTHR24220 3 229 6.7E-102 T 22-04-2016 LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 SMART SM00382 26 213 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 Pfam PF00005 ABC transporter 18 157 1.3E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS01700 c30fbc0d2070f60788233e103987b63b 297 Gene3D G3DSA:3.40.50.300 1 227 3.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS09275 63f61c3d6b11b3da25a7f5581c8572ae 116 PANTHER PTHR33169:SF3 1 106 1.1E-24 T 22-04-2016 LMES_RS09275 63f61c3d6b11b3da25a7f5581c8572ae 116 Gene3D G3DSA:1.10.10.10 2 107 3.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09275 63f61c3d6b11b3da25a7f5581c8572ae 116 PANTHER PTHR33169 1 106 1.1E-24 T 22-04-2016 LMES_RS09275 63f61c3d6b11b3da25a7f5581c8572ae 116 SUPERFAMILY SSF46785 12 108 3.66E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09275 63f61c3d6b11b3da25a7f5581c8572ae 116 Pfam PF03551 Transcriptional regulator PadR-like family 16 89 2.0E-21 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal LMES_RS00055 089e4a179bc78b9e19870aadae376b1c 490 Pfam PF00534 Glycosyl transferases group 1 305 460 3.4E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS00055 089e4a179bc78b9e19870aadae376b1c 490 PANTHER PTHR12526 317 487 4.7E-18 T 22-04-2016 LMES_RS00055 089e4a179bc78b9e19870aadae376b1c 490 PANTHER PTHR12526:SF374 317 487 4.7E-18 T 22-04-2016 LMES_RS00055 089e4a179bc78b9e19870aadae376b1c 490 Gene3D G3DSA:3.40.50.2000 316 462 4.7E-9 T 22-04-2016 LMES_RS00055 089e4a179bc78b9e19870aadae376b1c 490 SUPERFAMILY SSF53756 209 487 1.69E-25 T 22-04-2016 LMES_RS00065 c522d171a6ba2c92af41838c05b5b045 506 TIGRFAM TIGR03712 acc_sec_asp2: accessory Sec system protein Asp2 5 497 9.1E-84 T 22-04-2016 IPR022267 Accessory Sec system protein Asp2 GO:0015031 LMES_RS00065 c522d171a6ba2c92af41838c05b5b045 506 Gene3D G3DSA:3.40.50.1820 300 389 7.3E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS00065 c522d171a6ba2c92af41838c05b5b045 506 Gene3D G3DSA:3.40.50.1820 434 491 7.3E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS00065 c522d171a6ba2c92af41838c05b5b045 506 SUPERFAMILY SSF53474 318 489 6.6E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS00065 c522d171a6ba2c92af41838c05b5b045 506 Pfam PF16929 Accessory Sec system GspB-transporter 3 497 4.6E-156 T 22-04-2016 IPR022267 Accessory Sec system protein Asp2 GO:0015031 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 575 1.3E-208 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Gene3D G3DSA:1.10.730.10 577 757 2.4E-57 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Gene3D G3DSA:3.40.50.620 354 575 1.8E-138 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Gene3D G3DSA:3.40.50.620 9 202 1.8E-138 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 SUPERFAMILY SSF52374 4 201 3.13E-136 T 22-04-2016 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 SUPERFAMILY SSF52374 354 586 3.13E-136 T 22-04-2016 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Pfam PF08264 Anticodon-binding domain of tRNA 619 767 9.9E-39 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PRINTS PR00986 Valyl-tRNA synthetase signature 488 506 5.6E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PRINTS PR00986 Valyl-tRNA synthetase signature 244 261 5.6E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PRINTS PR00986 Valyl-tRNA synthetase signature 456 477 5.6E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 5.6E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PRINTS PR00986 Valyl-tRNA synthetase signature 359 372 5.6E-37 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Gene3D G3DSA:3.90.740.10 204 348 4.1E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 873 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 SUPERFAMILY SSF47323 587 840 2.8E-67 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PANTHER PTHR11946 1 802 0.0 T 22-04-2016 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PANTHER PTHR11946 822 889 0.0 T 22-04-2016 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 SUPERFAMILY SSF46589 826 890 6.8E-16 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 SUPERFAMILY SSF50677 201 355 5.36E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Gene3D G3DSA:1.10.287.380 819 887 1.1E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 826 891 3.4E-17 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PANTHER PTHR11946:SF5 1 802 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 PANTHER PTHR11946:SF5 822 889 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01505 4c0c410c636d74956cb33d74d8b201cd 894 Hamap MF_02004 Valine--tRNA ligase [valS]. 6 891 15.647 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 SUPERFAMILY SSF56601 319 679 7.57E-55 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 Gene3D G3DSA:3.40.710.10 319 676 3.8E-63 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 PANTHER PTHR30627:SF2 474 675 1.7E-115 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 PANTHER PTHR30627:SF2 169 457 1.7E-115 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 PANTHER PTHR30627:SF2 8 117 1.7E-115 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 SUPERFAMILY SSF56519 69 125 1.83E-27 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 SUPERFAMILY SSF56519 186 318 1.83E-27 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 PANTHER PTHR30627 474 675 1.7E-115 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 PANTHER PTHR30627 169 457 1.7E-115 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 PANTHER PTHR30627 8 117 1.7E-115 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 303 6.6E-32 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 Gene3D G3DSA:3.90.1310.10 201 318 1.2E-21 T 22-04-2016 LMES_RS01535 e3059268543b7bef76b71ff0b3f910ed 680 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 670 2.7E-50 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 SUPERFAMILY SSF64005 18 245 1.22E-84 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 19 250 38.893 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 PANTHER PTHR10291 19 259 2.3E-117 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 Gene3D G3DSA:3.40.1180.10 14 256 7.3E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 Pfam PF01255 Putative undecaprenyl diphosphate synthase 26 249 8.8E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 249 6.3E-81 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LMES_RS03290 84f52eaf3db772ae35f355247f785c81 259 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 195 212 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 LMES_RS05180 f2627bcc8e8d35371a2b0ae3865e0e24 447 Pfam PF05167 Uncharacterised ACR (DUF711) 12 411 1.6E-169 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 LMES_RS05180 f2627bcc8e8d35371a2b0ae3865e0e24 447 SUPERFAMILY SSF51998 2 442 1.56E-175 T 22-04-2016 LMES_RS05180 f2627bcc8e8d35371a2b0ae3865e0e24 447 PANTHER PTHR37560 1 447 1.3E-219 T 22-04-2016 LMES_RS05180 f2627bcc8e8d35371a2b0ae3865e0e24 447 Gene3D G3DSA:3.20.70.20 1 447 2.9E-206 T 22-04-2016 LMES_RS05180 f2627bcc8e8d35371a2b0ae3865e0e24 447 PANTHER PTHR37560:SF2 1 447 1.3E-219 T 22-04-2016 LMES_RS05180 f2627bcc8e8d35371a2b0ae3865e0e24 447 Hamap MF_01221 UPF0210 protein . 1 447 50.755 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 LMES_RS09080 4cb1e1e9f566890c9276011862e4158f 444 PANTHER PTHR11785:SF29 3 433 3.5E-138 T 22-04-2016 LMES_RS09080 4cb1e1e9f566890c9276011862e4158f 444 Pfam PF00324 Amino acid permease 15 443 8.2E-89 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LMES_RS09080 4cb1e1e9f566890c9276011862e4158f 444 PANTHER PTHR11785 3 433 3.5E-138 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS09080 4cb1e1e9f566890c9276011862e4158f 444 PIRSF PIRSF006060 1 444 3.8E-62 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS06075 53cf541421235eb795d09785937f86ed 254 PANTHER PTHR30520 1 247 9.1E-57 T 22-04-2016 LMES_RS06075 53cf541421235eb795d09785937f86ed 254 Gene3D G3DSA:1.20.1080.10 22 248 1.2E-57 T 22-04-2016 IPR023271 Aquaporin-like LMES_RS06075 53cf541421235eb795d09785937f86ed 254 PANTHER PTHR30520:SF0 1 247 9.1E-57 T 22-04-2016 LMES_RS06075 53cf541421235eb795d09785937f86ed 254 Pfam PF01226 Formate/nitrite transporter 11 247 1.6E-57 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LMES_RS06090 cfb960c98dc30e5ffa4d8c31479097d8 138 Pfam PF04138 GtrA-like protein 17 134 1.1E-19 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 LMES_RS02695 9edab57d786a65b74078a86156ed33a9 337 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 2.7E-90 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LMES_RS02695 9edab57d786a65b74078a86156ed33a9 337 PIRSF PIRSF000267 1 337 3.2E-97 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LMES_RS02695 9edab57d786a65b74078a86156ed33a9 337 PANTHER PTHR30365 1 337 2.8E-91 T 22-04-2016 LMES_RS02695 9edab57d786a65b74078a86156ed33a9 337 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 224 3.7E-64 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LMES_RS02695 9edab57d786a65b74078a86156ed33a9 337 PANTHER PTHR30365:SF6 1 337 2.8E-91 T 22-04-2016 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 SUPERFAMILY SSF90123 6 318 2.22E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 SMART SM00382 362 563 3.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 Pfam PF00005 ABC transporter 353 501 1.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 Gene3D G3DSA:3.40.50.300 342 567 1.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 Pfam PF00664 ABC transporter transmembrane region 20 291 1.4E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 SUPERFAMILY SSF52540 332 573 2.93E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 PANTHER PTHR24221:SF240 1 588 9.8E-203 T 22-04-2016 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 Gene3D G3DSA:1.20.1560.10 6 318 1.1E-69 T 22-04-2016 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS08750 ccab5d945acb94ec3ded2becb0dfa3ab 593 PANTHER PTHR24221 1 588 9.8E-203 T 22-04-2016 LMES_RS01625 e0375bd9b0e9e3ddc159922bde8a372c 253 PANTHER PTHR13696:SF52 1 250 2.4E-86 T 22-04-2016 LMES_RS01625 e0375bd9b0e9e3ddc159922bde8a372c 253 PANTHER PTHR13696 1 250 2.4E-86 T 22-04-2016 LMES_RS01625 e0375bd9b0e9e3ddc159922bde8a372c 253 SUPERFAMILY SSF52540 1 251 3.33E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01625 e0375bd9b0e9e3ddc159922bde8a372c 253 Pfam PF13614 AAA domain 3 176 2.7E-63 T 22-04-2016 IPR025669 AAA domain LMES_RS01625 e0375bd9b0e9e3ddc159922bde8a372c 253 Gene3D G3DSA:3.40.50.300 3 251 6.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08970 ce4f9770687939915147f1cac54074e0 66 SMART SM00530 4 59 2.1E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08970 ce4f9770687939915147f1cac54074e0 66 Gene3D G3DSA:1.10.260.40 2 64 2.0E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08970 ce4f9770687939915147f1cac54074e0 66 PANTHER PTHR10245 1 66 9.9E-18 T 22-04-2016 LMES_RS08970 ce4f9770687939915147f1cac54074e0 66 PANTHER PTHR10245:SF26 1 66 9.9E-18 T 22-04-2016 LMES_RS08970 ce4f9770687939915147f1cac54074e0 66 SUPERFAMILY SSF47413 2 63 7.88E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08970 ce4f9770687939915147f1cac54074e0 66 Pfam PF01381 Helix-turn-helix 6 59 6.8E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS02875 713533d31f9c6aee5edf70a30b7309d3 291 Pfam PF00483 Nucleotidyl transferase 6 266 1.4E-35 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LMES_RS02875 713533d31f9c6aee5edf70a30b7309d3 291 SUPERFAMILY SSF53448 2 269 3.38E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS02875 713533d31f9c6aee5edf70a30b7309d3 291 Gene3D G3DSA:3.90.550.10 5 277 6.2E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS02875 713533d31f9c6aee5edf70a30b7309d3 291 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 8.0E-112 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LMES_RS02875 713533d31f9c6aee5edf70a30b7309d3 291 PANTHER PTHR22572:SF14 6 290 1.5E-106 T 22-04-2016 LMES_RS02875 713533d31f9c6aee5edf70a30b7309d3 291 PANTHER PTHR22572 6 290 1.5E-106 T 22-04-2016 LMES_RS06325 04cc4cab18f560282e0401abbb2dd2a4 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 208 9.0E-90 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 LMES_RS06325 04cc4cab18f560282e0401abbb2dd2a4 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 6.1E-77 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS06325 04cc4cab18f560282e0401abbb2dd2a4 209 SUPERFAMILY SSF53271 4 207 7.21E-77 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS06325 04cc4cab18f560282e0401abbb2dd2a4 209 PANTHER PTHR10285 5 198 3.0E-101 T 22-04-2016 LMES_RS06325 04cc4cab18f560282e0401abbb2dd2a4 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.123 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 LMES_RS06325 04cc4cab18f560282e0401abbb2dd2a4 209 Gene3D G3DSA:3.40.50.2020 4 208 2.0E-86 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS02625 010614a8379862881163cc455f2d7b5a 318 PANTHER PTHR32468:SF4 1 315 5.1E-46 T 22-04-2016 LMES_RS02625 010614a8379862881163cc455f2d7b5a 318 PANTHER PTHR32468 1 315 5.1E-46 T 22-04-2016 LMES_RS02625 010614a8379862881163cc455f2d7b5a 318 Pfam PF00999 Sodium/hydrogen exchanger family 6 186 7.0E-28 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 355 45.268 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 Gene3D G3DSA:3.40.50.880 157 353 1.0E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 SMART SM01097 2 132 4.9E-80 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 SUPERFAMILY SSF52317 150 354 7.15E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 Pfam PF00117 Glutamine amidotransferase class-I 173 349 2.0E-44 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 SUPERFAMILY SSF52021 1 143 8.5E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00097 Anthranilate synthase component II signature 213 222 3.0E-7 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00097 Anthranilate synthase component II signature 240 251 3.0E-7 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00097 Anthranilate synthase component II signature 326 339 3.0E-7 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PANTHER PTHR11405 2 360 1.5E-187 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 8.7E-50 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 326 339 4.7E-12 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 4.7E-12 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 4.7E-12 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 Gene3D G3DSA:3.50.30.20 2 138 1.3E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 7.2E-35 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 7.2E-35 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 7.2E-35 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 7.2E-35 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 7.2E-35 T 22-04-2016 LMES_RS05320 b8b9ab8f2d95fe04a60fc348845cf63c 361 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 352 3.1E-140 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 Gene3D G3DSA:3.40.1030.10 74 336 6.4E-101 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 332 1.7E-113 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 3.5E-15 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 PANTHER PTHR11922:SF5 75 340 1.8E-107 T 22-04-2016 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 Gene3D G3DSA:1.20.970.10 5 71 8.4E-20 T 22-04-2016 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 SUPERFAMILY SSF52418 73 333 8.37E-90 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 PANTHER PTHR11922 75 340 1.8E-107 T 22-04-2016 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 335 36.325 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 Pfam PF00591 Glycosyl transferase family, a/b domain 75 326 5.7E-89 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LMES_RS05155 3a398eed314e16d34108ee7a73565b15 341 SUPERFAMILY SSF47648 3 71 1.06E-15 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 Gene3D G3DSA:1.20.1250.20 259 414 4.9E-25 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 Gene3D G3DSA:1.20.1250.20 582 606 4.9E-25 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 Gene3D G3DSA:1.20.1250.20 449 450 4.9E-25 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 Gene3D G3DSA:1.20.1250.20 8 186 6.3E-31 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 Pfam PF07690 Major Facilitator Superfamily 14 404 1.5E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 2.2E-10 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 2.2E-10 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 PRINTS PR01036 Tetracycline resistance protein TetB signature 333 353 2.2E-10 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 2.2E-10 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 PRINTS PR01036 Tetracycline resistance protein TetB signature 258 283 2.2E-10 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 464 8.5E-85 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 SUPERFAMILY SSF103473 4 189 2.35E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 PANTHER PTHR23501 6 414 1.3E-105 T 22-04-2016 LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 SUPERFAMILY SSF103473 577 606 4.71E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS01995 db2d2811d5e566bf65c0da98392deaa2 608 SUPERFAMILY SSF103473 205 414 4.71E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08660 c20d1a75effc9ccaf889d42dc0a2c33d 423 PANTHER PTHR23508 1 414 6.9E-75 T 22-04-2016 LMES_RS08660 c20d1a75effc9ccaf889d42dc0a2c33d 423 Gene3D G3DSA:1.20.1250.20 32 211 3.9E-31 T 22-04-2016 LMES_RS08660 c20d1a75effc9ccaf889d42dc0a2c33d 423 SUPERFAMILY SSF103473 8 414 3.53E-75 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08660 c20d1a75effc9ccaf889d42dc0a2c33d 423 Pfam PF07690 Major Facilitator Superfamily 34 287 1.7E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08660 c20d1a75effc9ccaf889d42dc0a2c33d 423 Gene3D G3DSA:1.20.1250.20 237 411 5.0E-22 T 22-04-2016 LMES_RS08660 c20d1a75effc9ccaf889d42dc0a2c33d 423 PANTHER PTHR23508:SF18 1 414 6.9E-75 T 22-04-2016 LMES_RS07025 201d2fb7d6817ddcd206e440ccdac074 173 PANTHER PTHR37805 2 167 5.1E-48 T 22-04-2016 LMES_RS07025 201d2fb7d6817ddcd206e440ccdac074 173 PANTHER PTHR37805:SF1 2 167 5.1E-48 T 22-04-2016 LMES_RS07025 201d2fb7d6817ddcd206e440ccdac074 173 Pfam PF07308 Protein of unknown function (DUF1456) 97 163 5.0E-18 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 LMES_RS07025 201d2fb7d6817ddcd206e440ccdac074 173 Pfam PF07308 Protein of unknown function (DUF1456) 5 74 1.4E-24 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 LMES_RS02080 8b341bbaf56d3463b5853e8551de0817 351 PANTHER PTHR34296:SF2 23 351 2.5E-117 T 22-04-2016 LMES_RS02080 8b341bbaf56d3463b5853e8551de0817 351 Gene3D G3DSA:3.40.50.2300 160 321 3.0E-52 T 22-04-2016 LMES_RS02080 8b341bbaf56d3463b5853e8551de0817 351 Gene3D G3DSA:3.40.50.2300 32 159 1.2E-45 T 22-04-2016 LMES_RS02080 8b341bbaf56d3463b5853e8551de0817 351 Pfam PF02608 Basic membrane protein 37 348 4.4E-70 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 LMES_RS02080 8b341bbaf56d3463b5853e8551de0817 351 SUPERFAMILY SSF53822 48 304 3.14E-15 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS02080 8b341bbaf56d3463b5853e8551de0817 351 PANTHER PTHR34296 23 351 2.5E-117 T 22-04-2016 LMES_RS04410 bf175626be226fe1ac86083bd3823eb8 195 Gene3D G3DSA:3.40.50.300 2 183 1.2E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04410 bf175626be226fe1ac86083bd3823eb8 195 Pfam PF00005 ABC transporter 17 150 5.7E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS04410 bf175626be226fe1ac86083bd3823eb8 195 SUPERFAMILY SSF52540 2 187 5.53E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04410 bf175626be226fe1ac86083bd3823eb8 195 PANTHER PTHR24220 2 186 8.3E-23 T 22-04-2016 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 Pfam PF14527 WhiA LAGLIDADG-like domain 123 215 1.3E-37 T 22-04-2016 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 PANTHER PTHR37307 2 312 4.5E-83 T 22-04-2016 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 SUPERFAMILY SSF55608 111 219 4.93E-21 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 102 2.3E-25 T 22-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 300 2.8E-93 T 22-04-2016 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 Gene3D G3DSA:3.10.28.10 111 210 1.5E-14 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 303 30.337 T 22-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 LMES_RS01870 c50ac20d9531263a6f1f846ce0a46ef0 314 Pfam PF02650 WhiA C-terminal HTH domain 218 300 7.8E-29 T 22-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal LMES_RS02245 1b6936070c9ba6730feca208e4ea658e 433 SMART SM00047 268 432 4.0E-33 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LMES_RS02245 1b6936070c9ba6730feca208e4ea658e 433 Pfam PF02618 YceG-like family 86 270 1.3E-15 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like LMES_RS02245 1b6936070c9ba6730feca208e4ea658e 433 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 289 428 6.9E-21 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LMES_RS02245 1b6936070c9ba6730feca208e4ea658e 433 PANTHER PTHR33308 274 433 2.1E-24 T 22-04-2016 LMES_RS02245 1b6936070c9ba6730feca208e4ea658e 433 PANTHER PTHR33308:SF3 274 433 2.1E-24 T 22-04-2016 LMES_RS00500 ab1cb42edd7d8a85fbc0c38bb465061c 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 4.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00500 ab1cb42edd7d8a85fbc0c38bb465061c 222 PANTHER PTHR30614 1 222 8.1E-95 T 22-04-2016 LMES_RS00500 ab1cb42edd7d8a85fbc0c38bb465061c 222 Gene3D G3DSA:1.10.3720.10 12 217 7.8E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00500 ab1cb42edd7d8a85fbc0c38bb465061c 222 PANTHER PTHR30614:SF16 1 222 8.1E-95 T 22-04-2016 LMES_RS00500 ab1cb42edd7d8a85fbc0c38bb465061c 222 SUPERFAMILY SSF161098 13 206 7.74E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00500 ab1cb42edd7d8a85fbc0c38bb465061c 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 2.4E-26 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 Pfam PF00162 Phosphoglycerate kinase 6 394 5.3E-150 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 357 368 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 178 200 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 147 169 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 380 397 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 321 346 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 201 220 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.5E-89 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PANTHER PTHR11406 1 405 2.5E-207 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 SUPERFAMILY SSF53748 1 404 4.48E-148 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 Gene3D G3DSA:3.40.50.1270 190 392 1.9E-78 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 404 40.773 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 PIRSF PIRSF000724 1 405 4.1E-137 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 Gene3D G3DSA:3.40.50.1260 4 189 3.7E-68 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS08665 fce4733c67b0b0c9803e4be53aea2e36 405 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LMES_RS00215 2187dbd675dbd89759141168b24e7f0e 353 PANTHER PTHR12526 3 353 1.7E-37 T 22-04-2016 LMES_RS00215 2187dbd675dbd89759141168b24e7f0e 353 Gene3D G3DSA:3.40.50.2000 177 324 3.3E-21 T 22-04-2016 LMES_RS00215 2187dbd675dbd89759141168b24e7f0e 353 SUPERFAMILY SSF53756 12 353 1.49E-57 T 22-04-2016 LMES_RS00215 2187dbd675dbd89759141168b24e7f0e 353 Pfam PF00534 Glycosyl transferases group 1 175 333 2.9E-29 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 Gene3D G3DSA:3.90.470.10 7 116 9.8E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 Pfam PF00237 Ribosomal protein L22p/L17e 15 112 4.9E-31 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 6 115 28.724 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 PANTHER PTHR13501 7 114 2.4E-41 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 10 112 4.5E-40 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 SUPERFAMILY SSF54843 6 116 7.46E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LMES_RS00925 4b54e638a8f61e6f72c054884c96dbc5 118 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 PANTHER PTHR18966:SF210 37 267 3.1E-15 T 22-04-2016 LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 SUPERFAMILY SSF53850 42 273 4.89E-39 T 22-04-2016 LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 SMART SM00062 43 270 3.3E-26 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 Gene3D G3DSA:3.40.190.10 122 208 1.9E-10 T 22-04-2016 LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 268 1.4E-42 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 PANTHER PTHR18966 37 267 3.1E-15 T 22-04-2016 LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 Gene3D G3DSA:3.40.190.10 229 272 1.3E-27 T 22-04-2016 LMES_RS01740 a70b288159c4810856cc9059dd7382b6 275 Gene3D G3DSA:3.40.190.10 42 121 1.3E-27 T 22-04-2016 LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 PANTHER PTHR23517 1 400 2.6E-94 T 22-04-2016 LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 Pfam PF07690 Major Facilitator Superfamily 258 405 9.8E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 Pfam PF07690 Major Facilitator Superfamily 17 222 6.6E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 SUPERFAMILY SSF103473 17 405 3.92E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 PANTHER PTHR23517:SF5 1 400 2.6E-94 T 22-04-2016 LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 Gene3D G3DSA:1.20.1250.20 17 190 1.7E-21 T 22-04-2016 LMES_RS08295 5d15ff30953771cb02997a5573e398a0 409 Gene3D G3DSA:1.20.1250.20 217 405 1.7E-12 T 22-04-2016 LMES_RS06360 edd40343af6988b06f2063727bc53474 57 PANTHER PTHR35534 1 57 1.3E-15 T 22-04-2016 LMES_RS06360 edd40343af6988b06f2063727bc53474 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 4.4E-17 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LMES_RS06360 edd40343af6988b06f2063727bc53474 57 SUPERFAMILY SSF57829 2 55 1.4E-15 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LMES_RS06360 edd40343af6988b06f2063727bc53474 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 15.937 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LMES_RS06360 edd40343af6988b06f2063727bc53474 57 Pfam PF01783 Ribosomal L32p protein family 2 56 7.1E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LMES_RS02545 33673fca9185c1fc3c020a8faf2c6777 315 Pfam PF01695 IstB-like ATP binding protein 161 279 3.2E-11 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 LMES_RS02545 33673fca9185c1fc3c020a8faf2c6777 315 Pfam PF07319 Primosomal protein DnaI N-terminus 1 93 3.6E-22 T 22-04-2016 IPR009928 Primosomal DnaI, N-terminal LMES_RS02545 33673fca9185c1fc3c020a8faf2c6777 315 Gene3D G3DSA:3.40.50.300 105 305 4.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02545 33673fca9185c1fc3c020a8faf2c6777 315 SUPERFAMILY SSF52540 145 280 7.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02545 33673fca9185c1fc3c020a8faf2c6777 315 PANTHER PTHR30050:SF8 30 312 1.1E-62 T 22-04-2016 LMES_RS02545 33673fca9185c1fc3c020a8faf2c6777 315 PANTHER PTHR30050 30 312 1.1E-62 T 22-04-2016 LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 SUPERFAMILY SSF52540 5 254 1.33E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 Gene3D G3DSA:3.30.70.260 251 357 1.3E-27 T 22-04-2016 LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 SMART SM00382 34 254 1.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 SUPERFAMILY SSF55021 268 357 1.26E-22 T 22-04-2016 LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 Pfam PF09383 NIL domain 284 353 1.3E-21 T 22-04-2016 IPR018449 NIL domain LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 PANTHER PTHR24220 7 303 3.1E-134 T 22-04-2016 LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 PANTHER PTHR24220:SF549 7 303 3.1E-134 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 Pfam PF00005 ABC transporter 25 183 1.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 SMART SM00930 280 355 1.6E-27 T 22-04-2016 IPR018449 NIL domain LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 Gene3D G3DSA:3.40.50.300 4 250 7.6E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02035 22e4b076ceba614cada0a993c5d6f029 359 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS06815 e8a8c749d34d9caa06ca4f0ad48940af 384 Gene3D G3DSA:2.40.260.10 94 230 1.7E-43 T 22-04-2016 IPR023365 Sortase domain LMES_RS06815 e8a8c749d34d9caa06ca4f0ad48940af 384 PANTHER PTHR33393:SF5 30 304 3.1E-17 T 22-04-2016 LMES_RS06815 e8a8c749d34d9caa06ca4f0ad48940af 384 PANTHER PTHR33393 30 304 3.1E-17 T 22-04-2016 LMES_RS06815 e8a8c749d34d9caa06ca4f0ad48940af 384 TIGRFAM TIGR01076 sortase_fam: sortase 99 231 7.7E-42 T 22-04-2016 IPR005754 Sortase family LMES_RS06815 e8a8c749d34d9caa06ca4f0ad48940af 384 Pfam PF04203 Sortase family 101 225 5.5E-23 T 22-04-2016 IPR005754 Sortase family LMES_RS06815 e8a8c749d34d9caa06ca4f0ad48940af 384 SUPERFAMILY SSF63817 91 229 6.93E-40 T 22-04-2016 IPR023365 Sortase domain LMES_RS04505 e1133eb459b281d59a2d58e9a3d13ef4 428 PANTHER PTHR11119 14 409 2.1E-55 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS04505 e1133eb459b281d59a2d58e9a3d13ef4 428 Pfam PF00860 Permease family 14 382 2.3E-76 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 PIRSF PIRSF000161 1 240 2.9E-54 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 130 147 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 12 240 1.2E-45 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 PANTHER PTHR20836 1 240 2.2E-55 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 SUPERFAMILY SSF55347 109 212 2.05E-29 T 22-04-2016 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 Gene3D G3DSA:3.40.50.720 1 125 4.2E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 112 236 1.8E-26 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 108 6.3E-17 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 Gene3D G3DSA:3.30.360.10 126 208 1.7E-26 T 22-04-2016 LMES_RS03220 3c0a2349126b98e51b61c0f88cef79b3 240 SUPERFAMILY SSF51735 1 133 1.97E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 PIRSF PIRSF039085 6 249 4.7E-110 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 Pfam PF00005 ABC transporter 25 173 8.8E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 Gene3D G3DSA:3.40.50.300 10 245 2.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 SUPERFAMILY SSF52540 11 243 5.58E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 PANTHER PTHR24220:SF327 11 248 7.0E-131 T 22-04-2016 LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 SMART SM00382 34 221 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02090 415b141e4fbfc6b1e77ae163a95b2e3d 250 PANTHER PTHR24220 11 248 7.0E-131 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 SUPERFAMILY SSF103473 6 195 2.09E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 SUPERFAMILY SSF103473 243 443 2.09E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 Pfam PF07690 Major Facilitator Superfamily 17 404 1.1E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 Gene3D G3DSA:1.20.1250.20 260 446 1.4E-17 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 Gene3D G3DSA:1.20.1250.20 13 194 1.0E-23 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 PANTHER PTHR23501 11 443 2.5E-72 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 PRINTS PR01036 Tetracycline resistance protein TetB signature 332 352 1.6E-5 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 1.6E-5 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 1.6E-5 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 PRINTS PR01036 Tetracycline resistance protein TetB signature 297 321 1.6E-5 T 22-04-2016 LMES_RS04655 a0527f14bec05c9594450c39236cd093 449 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 1.6E-5 T 22-04-2016 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 49.527 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 PANTHER PTHR10314:SF3 5 387 2.9E-211 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 Gene3D G3DSA:3.40.50.1100 97 175 1.7E-17 T 22-04-2016 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 PIRSF PIRSF001413 1 395 1.8E-167 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 Gene3D G3DSA:3.40.50.1100 176 390 7.1E-88 T 22-04-2016 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 2.7E-44 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 PANTHER PTHR10314 5 387 2.9E-211 T 22-04-2016 LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 SUPERFAMILY SSF53686 4 386 3.14E-137 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS05160 f7d2d432372e07b9a0ef50acb8d50f06 395 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 5 388 2.0E-190 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1177 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 SUPERFAMILY SSF90257 234 353 1.1E-5 T 22-04-2016 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 SUPERFAMILY SSF75553 489 685 1.2E-49 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1179 22.846 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 PANTHER PTHR18937:SF251 377 1184 0.0 T 22-04-2016 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 PANTHER PTHR18937:SF251 1 350 0.0 T 22-04-2016 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 PIRSF PIRSF005719 1 1184 0.0 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Gene3D G3DSA:3.40.50.300 1043 1180 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Gene3D G3DSA:3.40.50.300 1 163 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Gene3D G3DSA:3.40.50.300 931 932 3.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 SUPERFAMILY SSF52540 1063 1174 6.12E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 SUPERFAMILY SSF52540 1 210 6.12E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 PANTHER PTHR18937 377 1184 0.0 T 22-04-2016 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 PANTHER PTHR18937 1 350 0.0 T 22-04-2016 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1170 5.8E-73 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Gene3D G3DSA:3.40.50.300 349 467 9.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 Pfam PF06470 SMC proteins Flexible Hinge Domain 520 637 1.6E-27 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LMES_RS06985 1b484ae1eca049c69bbbdd2a90c75ae5 1185 SMART SM00968 520 637 1.1E-35 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 9.0E-17 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 9.0E-17 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 9.0E-17 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 9.0E-17 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 252 1.5E-80 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 PANTHER PTHR10804:SF108 1 256 1.7E-127 T 22-04-2016 LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 Pfam PF00557 Metallopeptidase family M24 11 244 2.1E-44 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 PANTHER PTHR10804 1 256 1.7E-127 T 22-04-2016 LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 SUPERFAMILY SSF55920 1 256 3.01E-76 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 Hamap MF_01974 Methionine aminopeptidase [map]. 2 253 37.496 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LMES_RS06315 d55fc0ed8f6956871e63d21c7b669cf9 262 Gene3D G3DSA:3.90.230.10 1 257 1.2E-82 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS01615 186082c29d97bf9c9a51a5d567e2b2fa 315 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 292 2.4E-66 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS01615 186082c29d97bf9c9a51a5d567e2b2fa 315 SUPERFAMILY SSF53590 3 297 1.11E-89 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS01615 186082c29d97bf9c9a51a5d567e2b2fa 315 Gene3D G3DSA:3.90.245.10 2 297 6.1E-93 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS01615 186082c29d97bf9c9a51a5d567e2b2fa 315 PANTHER PTHR12304 1 297 6.9E-87 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LMES_RS01615 186082c29d97bf9c9a51a5d567e2b2fa 315 PANTHER PTHR12304:SF15 1 297 6.9E-87 T 22-04-2016 LMES_RS06275 d570faf840fc72fe16edc9d34683c8fc 365 PANTHER PTHR12526 72 295 2.4E-30 T 22-04-2016 LMES_RS06275 d570faf840fc72fe16edc9d34683c8fc 365 Gene3D G3DSA:3.40.50.2000 163 298 4.0E-19 T 22-04-2016 LMES_RS06275 d570faf840fc72fe16edc9d34683c8fc 365 Pfam PF13439 Glycosyltransferase Family 4 19 171 5.3E-9 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LMES_RS06275 d570faf840fc72fe16edc9d34683c8fc 365 Pfam PF00534 Glycosyl transferases group 1 181 298 1.8E-21 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS06275 d570faf840fc72fe16edc9d34683c8fc 365 SUPERFAMILY SSF53756 5 360 3.65E-48 T 22-04-2016 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 SUPERFAMILY SSF47413 4 68 6.17E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 Pfam PF00005 ABC transporter 89 221 1.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 SUPERFAMILY SSF52540 83 289 4.33E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 SMART SM00382 98 267 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 Pfam PF01381 Helix-turn-helix 11 63 1.0E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 SMART SM00530 8 63 1.6E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 Gene3D G3DSA:3.40.50.300 68 284 2.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 Gene3D G3DSA:1.10.260.40 2 66 1.5E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 ProSitePatterns PS00211 ABC transporters family signature. 194 208 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS00450 00babe8c9995087c407efb12f7a45fd9 296 PANTHER PTHR24220 76 295 7.9E-51 T 22-04-2016 LMES_RS06775 86ad9e2a87c1f1aa594446bf27f5b234 244 SUPERFAMILY SSF102198 13 243 1.44E-48 T 22-04-2016 LMES_RS06775 86ad9e2a87c1f1aa594446bf27f5b234 244 PANTHER PTHR31118 10 241 1.0E-58 T 22-04-2016 LMES_RS06775 86ad9e2a87c1f1aa594446bf27f5b234 244 PANTHER PTHR31118:SF9 10 241 1.0E-58 T 22-04-2016 LMES_RS06775 86ad9e2a87c1f1aa594446bf27f5b234 244 Pfam PF04199 Putative cyclase 16 182 1.8E-28 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 LMES_RS06775 86ad9e2a87c1f1aa594446bf27f5b234 244 Gene3D G3DSA:3.50.30.50 12 243 4.5E-55 T 22-04-2016 LMES_RS00550 a8887c27975fbab94c0c0474db468326 132 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 11 125 13.897 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LMES_RS00550 a8887c27975fbab94c0c0474db468326 132 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 13 120 2.0E-15 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LMES_RS00550 a8887c27975fbab94c0c0474db468326 132 PANTHER PTHR28259 7 127 1.4E-12 T 22-04-2016 LMES_RS04585 578cf8b766ca908174aa70184749c571 119 PANTHER PTHR38446 1 119 2.6E-21 T 22-04-2016 LMES_RS04585 578cf8b766ca908174aa70184749c571 119 PANTHER PTHR38446:SF1 1 119 2.6E-21 T 22-04-2016 LMES_RS04585 578cf8b766ca908174aa70184749c571 119 Pfam PF06993 Protein of unknown function (DUF1304) 9 116 1.0E-25 T 22-04-2016 IPR009732 Protein of unknown function DUF1304 LMES_RS06400 25a0a627f3b86464ebdedbbf666655bc 335 Pfam PF00303 Thymidylate synthase 11 231 6.8E-24 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS06400 25a0a627f3b86464ebdedbbf666655bc 335 SUPERFAMILY SSF55831 8 272 4.58E-60 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS06400 25a0a627f3b86464ebdedbbf666655bc 335 Gene3D G3DSA:3.30.572.10 1 242 4.3E-51 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 SMART SM00046 3 132 1.3E-4 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 299 4.8E-73 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 PANTHER PTHR12358 2 313 2.7E-124 T 22-04-2016 LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 SUPERFAMILY SSF111331 1 303 2.18E-72 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 PANTHER PTHR12358:SF41 2 313 2.7E-124 T 22-04-2016 LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 129 1.0E-31 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LMES_RS07050 e339944cf62a4ac73f6413b4f0f0b36f 328 Gene3D G3DSA:3.40.50.10330 43 92 2.9E-4 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 480 491 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 16 572 45.166 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 Pfam PF00920 Dehydratase family 48 568 3.4E-219 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 SUPERFAMILY SSF143975 11 391 7.85E-134 T 22-04-2016 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 SUPERFAMILY SSF52016 392 572 1.41E-60 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 PANTHER PTHR21000 17 572 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 136 146 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 PANTHER PTHR21000:SF11 17 572 0.0 T 22-04-2016 LMES_RS09250 e48b5877224eafedfe2211cacbc97eb1 580 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 29 572 6.6E-234 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LMES_RS03415 f8b8a2480b86bdc44bfebc513aaab5a6 131 Pfam PF06486 Protein of unknown function (DUF1093) 33 119 4.5E-15 T 22-04-2016 IPR006542 Protein of unknown function DUF1093 LMES_RS03415 f8b8a2480b86bdc44bfebc513aaab5a6 131 SUPERFAMILY SSF159121 30 131 2.49E-17 T 22-04-2016 LMES_RS07810 3b2733a9d3b830760c2269cf3b0d0a20 139 PANTHER PTHR33221:SF5 2 136 2.8E-45 T 22-04-2016 LMES_RS07810 3b2733a9d3b830760c2269cf3b0d0a20 139 PANTHER PTHR33221 2 136 2.8E-45 T 22-04-2016 LMES_RS07810 3b2733a9d3b830760c2269cf3b0d0a20 139 Pfam PF02082 Transcriptional regulator 1 81 8.6E-20 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type LMES_RS07810 3b2733a9d3b830760c2269cf3b0d0a20 139 Gene3D G3DSA:1.10.10.10 1 136 5.2E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07810 3b2733a9d3b830760c2269cf3b0d0a20 139 SUPERFAMILY SSF46785 2 135 4.12E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS05055 840103a2f36b8729cbf86443e26ac9e0 408 Gene3D G3DSA:1.20.1250.20 18 202 1.7E-37 T 22-04-2016 LMES_RS05055 840103a2f36b8729cbf86443e26ac9e0 408 Gene3D G3DSA:1.20.1250.20 223 405 9.6E-20 T 22-04-2016 LMES_RS05055 840103a2f36b8729cbf86443e26ac9e0 408 SUPERFAMILY SSF103473 9 405 2.75E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS05055 840103a2f36b8729cbf86443e26ac9e0 408 PANTHER PTHR11662 18 401 3.6E-47 T 22-04-2016 LMES_RS05055 840103a2f36b8729cbf86443e26ac9e0 408 Pfam PF07690 Major Facilitator Superfamily 23 367 1.2E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS01755 a54ffd5bbcc65d2aa59b655cc77bebc7 411 PANTHER PTHR11751:SF294 15 405 6.7E-93 T 22-04-2016 LMES_RS01755 a54ffd5bbcc65d2aa59b655cc77bebc7 411 Gene3D G3DSA:3.90.1150.10 285 403 4.3E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS01755 a54ffd5bbcc65d2aa59b655cc77bebc7 411 Gene3D G3DSA:3.40.640.10 63 284 3.9E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS01755 a54ffd5bbcc65d2aa59b655cc77bebc7 411 Pfam PF00155 Aminotransferase class I and II 46 396 1.2E-37 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS01755 a54ffd5bbcc65d2aa59b655cc77bebc7 411 SUPERFAMILY SSF53383 6 400 1.31E-90 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS01755 a54ffd5bbcc65d2aa59b655cc77bebc7 411 PANTHER PTHR11751 15 405 6.7E-93 T 22-04-2016 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 Gene3D G3DSA:3.30.9.10 214 316 3.8E-50 T 22-04-2016 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 Gene3D G3DSA:3.30.9.10 62 147 3.8E-50 T 22-04-2016 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 PANTHER PTHR10961:SF7 1 374 2.6E-109 T 22-04-2016 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 Pfam PF01266 FAD dependent oxidoreductase 6 353 4.0E-42 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 SUPERFAMILY SSF54373 215 316 7.85E-17 T 22-04-2016 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 Gene3D G3DSA:3.50.50.60 148 211 1.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 Gene3D G3DSA:3.50.50.60 3 59 1.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 Gene3D G3DSA:3.50.50.60 319 374 1.0E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 PANTHER PTHR10961 1 374 2.6E-109 T 22-04-2016 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 SUPERFAMILY SSF51905 5 219 6.15E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00545 67b9113226c0975f2da96ed4d705c7db 375 SUPERFAMILY SSF51905 316 373 6.15E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 PANTHER PTHR24220:SF431 5 219 1.1E-86 T 22-04-2016 LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 Gene3D G3DSA:3.40.50.300 4 221 1.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 PANTHER PTHR24220 5 219 1.1E-86 T 22-04-2016 LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 Pfam PF00005 ABC transporter 23 170 2.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 SMART SM00382 32 220 1.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03910 74d38b668d8be5f5961dd524bf4c1d1b 231 SUPERFAMILY SSF52540 4 223 3.45E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08690 4f9602197ae72b0d20af5db93510bc9b 294 Pfam PF01925 Sulfite exporter TauE/SafE 11 150 6.0E-9 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 1.7E-51 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 211 318 3.4E-24 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 PANTHER PTHR10210 1 323 5.1E-180 T 22-04-2016 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 Gene3D G3DSA:3.40.50.2020 4 162 3.2E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 SMART SM01400 6 122 1.8E-80 T 22-04-2016 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 318 50.135 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 Gene3D G3DSA:3.40.50.2020 163 290 2.8E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 SUPERFAMILY SSF53271 71 308 9.18E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 PANTHER PTHR10210:SF41 1 323 5.1E-180 T 22-04-2016 LMES_RS08815 a1b9b9c129cd6c0092212b5b9b73a4ef 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 318 4.5E-122 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 SUPERFAMILY SSF48179 151 252 6.8E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 89 1.7E-16 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 152 252 7.8E-27 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 PIRSF PIRSF000193 1 255 5.1E-61 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 212 234 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 SUPERFAMILY SSF51735 1 149 1.6E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 Gene3D G3DSA:3.40.50.720 4 148 3.4E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 PANTHER PTHR11645 1 251 2.7E-60 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 PANTHER PTHR11645:SF0 1 251 2.7E-60 T 22-04-2016 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 255 20.574 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 252 1.2E-60 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS08370 6e7621fcf3f2cb6cbbea37e0cb9b41dd 255 Gene3D G3DSA:1.10.3730.10 151 252 5.5E-27 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LMES_RS07865 04d28c0000620c924857ff4199907bf8 295 PANTHER PTHR13929:SF0 4 295 1.1E-37 T 22-04-2016 LMES_RS07865 04d28c0000620c924857ff4199907bf8 295 PANTHER PTHR13929 4 295 1.1E-37 T 22-04-2016 LMES_RS07865 04d28c0000620c924857ff4199907bf8 295 PIRSF PIRSF005355 1 295 1.5E-42 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 LMES_RS07865 04d28c0000620c924857ff4199907bf8 295 Pfam PF01040 UbiA prenyltransferase family 19 270 2.4E-28 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 PANTHER PTHR11280 1 233 2.5E-98 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 233 2.9E-72 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 221 7.5E-19 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 40.096 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 Gene3D G3DSA:3.40.50.1360 1 233 1.2E-84 T 22-04-2016 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 SUPERFAMILY SSF100950 1 233 1.26E-82 T 22-04-2016 LMES_RS01665 66d9fdb858c32110ab9459abc9804d26 233 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 112 130 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 118 8.0E-18 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 118 1.2E-22 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 117 19.997 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 115 1.6E-23 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 SUPERFAMILY SSF56214 1 116 7.19E-29 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 100 2.4E-19 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS08140 3425e36eaa7390a5a3a12f50ed1b9ccc 136 Gene3D G3DSA:3.90.470.20 1 117 4.6E-32 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 TIGRFAM TIGR01312 XylB: xylulokinase 6 484 1.4E-176 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 PIRSF PIRSF000538 2 495 4.2E-155 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 441 1.6E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 PANTHER PTHR10196 1 499 5.4E-173 T 22-04-2016 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 SUPERFAMILY SSF53067 4 249 3.89E-74 T 22-04-2016 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 Gene3D G3DSA:3.30.420.40 250 490 5.9E-60 T 22-04-2016 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 PANTHER PTHR10196:SF67 1 499 5.4E-173 T 22-04-2016 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 Gene3D G3DSA:3.30.420.40 2 248 2.1E-69 T 22-04-2016 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 247 1.1E-68 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LMES_RS00585 bd631a3babf80f50d5137aa7e80b1055 503 SUPERFAMILY SSF53067 249 489 2.97E-68 T 22-04-2016 LMES_RS07740 144549fb59088468360fc3137bca3127 229 PANTHER PTHR26402 2 228 2.8E-94 T 22-04-2016 LMES_RS07740 144549fb59088468360fc3137bca3127 229 Gene3D G3DSA:3.40.50.2300 2 121 1.0E-39 T 22-04-2016 LMES_RS07740 144549fb59088468360fc3137bca3127 229 SUPERFAMILY SSF52172 2 125 4.13E-41 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS07740 144549fb59088468360fc3137bca3127 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 227 6.4E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS07740 144549fb59088468360fc3137bca3127 229 SMART SM00862 151 227 1.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS07740 144549fb59088468360fc3137bca3127 229 PANTHER PTHR26402:SF578 2 228 2.8E-94 T 22-04-2016 LMES_RS07740 144549fb59088468360fc3137bca3127 229 SMART SM00448 2 112 1.5E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS07740 144549fb59088468360fc3137bca3127 229 Gene3D G3DSA:1.10.10.10 128 228 2.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS07740 144549fb59088468360fc3137bca3127 229 SUPERFAMILY SSF46894 128 227 4.82E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LMES_RS07740 144549fb59088468360fc3137bca3127 229 Pfam PF00072 Response regulator receiver domain 4 113 3.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 SUPERFAMILY SSF52518 375 588 1.55E-30 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 Gene3D G3DSA:3.40.50.970 46 269 1.1E-11 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 399 572 3.4E-72 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 Pfam PF09363 XFP C-terminal domain 585 784 3.2E-73 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 PANTHER PTHR31273 5 788 0.0 T 22-04-2016 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 PIRSF PIRSF017245 2 786 0.0 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 PANTHER PTHR31273:SF0 5 788 0.0 T 22-04-2016 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 SUPERFAMILY SSF52518 4 367 3.1E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 ProSitePatterns PS60003 Phosphoketolase signature 2. 153 171 - T 22-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 LMES_RS06410 5edfd02382b3b201f66a688db9ca4b4d 788 Pfam PF09364 XFP N-terminal domain 6 383 3.6E-168 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 Gene3D G3DSA:3.40.190.10 143 278 3.7E-19 T 22-04-2016 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PIRSF PIRSF019574 1 358 3.7E-141 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 Gene3D G3DSA:3.40.190.10 36 141 5.1E-62 T 22-04-2016 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 Gene3D G3DSA:3.40.190.10 279 323 5.1E-62 T 22-04-2016 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PANTHER PTHR30222 11 356 6.3E-113 T 22-04-2016 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PANTHER PTHR30222:SF5 11 356 6.3E-113 T 22-04-2016 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 257 276 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 132 148 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 85 99 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 195 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 302 328 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 58 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 58 79 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 101 114 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 213 232 2.7E-57 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 Pfam PF13416 Bacterial extracellular solute-binding protein 52 323 4.6E-39 T 22-04-2016 LMES_RS00890 5d74dd9d79ad085ca902c832cbeac1ed 359 SUPERFAMILY SSF53850 36 355 1.09E-91 T 22-04-2016 LMES_RS03440 7785ab80af112dce3ba52fba7e730165 112 Gene3D G3DSA:1.10.1660.10 14 101 1.8E-20 T 22-04-2016 LMES_RS03440 7785ab80af112dce3ba52fba7e730165 112 PANTHER PTHR30204:SF8 5 100 2.1E-21 T 22-04-2016 LMES_RS03440 7785ab80af112dce3ba52fba7e730165 112 SUPERFAMILY SSF46955 14 102 7.33E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain LMES_RS03440 7785ab80af112dce3ba52fba7e730165 112 SMART SM00422 13 81 4.6E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS03440 7785ab80af112dce3ba52fba7e730165 112 PANTHER PTHR30204 5 100 2.1E-21 T 22-04-2016 LMES_RS03440 7785ab80af112dce3ba52fba7e730165 112 Pfam PF13411 MerR HTH family regulatory protein 14 80 6.6E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 Pfam PF00265 Thymidine kinase 3 185 4.4E-43 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 SUPERFAMILY SSF52540 1 141 2.28E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 Gene3D G3DSA:3.30.60.20 141 190 1.4E-17 T 22-04-2016 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 Gene3D G3DSA:3.40.50.300 8 106 5.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 PANTHER PTHR11441 1 192 3.9E-54 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 SUPERFAMILY SSF57716 141 193 2.62E-16 T 22-04-2016 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 Hamap MF_00124 Thymidine kinase [tdk]. 1 188 32.863 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 172 185 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LMES_RS08005 33d9c22c28d711fa9144ca8cc146e284 200 PIRSF PIRSF035805 1 197 2.3E-54 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 LMES_RS07820 a2c0dcf95e1cfb51076e22ca37a27511 1178 PANTHER PTHR24023 635 977 4.6E-63 T 22-04-2016 LMES_RS07820 a2c0dcf95e1cfb51076e22ca37a27511 1178 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 5 27 7.3E-8 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS07820 a2c0dcf95e1cfb51076e22ca37a27511 1178 Pfam PF01391 Collagen triple helix repeat (20 copies) 635 691 3.3E-8 T 22-04-2016 IPR008160 Collagen triple helix repeat LMES_RS07820 a2c0dcf95e1cfb51076e22ca37a27511 1178 Pfam PF01391 Collagen triple helix repeat (20 copies) 920 978 7.0E-9 T 22-04-2016 IPR008160 Collagen triple helix repeat LMES_RS07820 a2c0dcf95e1cfb51076e22ca37a27511 1178 PANTHER PTHR24023:SF541 635 977 4.6E-63 T 22-04-2016 LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 Gene3D G3DSA:3.40.50.880 292 536 9.8E-95 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 Pfam PF06418 CTP synthase N-terminus 7 271 1.1E-123 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 SUPERFAMILY SSF52540 6 275 1.54E-119 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 Gene3D G3DSA:3.40.50.300 3 289 2.2E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 Hamap MF_01227 CTP synthase [pyrG]. 6 537 50.091 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 Pfam PF00117 Glutamine amidotransferase class-I 306 531 1.5E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 PANTHER PTHR11550 1 534 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 TIGRFAM TIGR00337 PyrG: CTP synthase 5 532 8.8E-241 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LMES_RS02480 d4e3ae6553057b42c2ecdd3fa89d15e2 537 SUPERFAMILY SSF52317 293 535 4.14E-75 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 281 4.4E-84 T 22-04-2016 IPR003797 DegV LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 PANTHER PTHR33434:SF1 1 284 8.7E-79 T 22-04-2016 LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 282 5.1E-76 T 22-04-2016 IPR003797 DegV LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 Gene3D G3DSA:3.40.50.10170 3 151 6.1E-49 T 22-04-2016 LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 PANTHER PTHR33434 1 284 8.7E-79 T 22-04-2016 LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 Gene3D G3DSA:3.30.1180.10 157 282 6.2E-33 T 22-04-2016 LMES_RS03640 31abca46c5fc964d91ffb1631580c294 284 SUPERFAMILY SSF82549 1 282 1.12E-79 T 22-04-2016 LMES_RS07780 c6d5a9ee23e63c46254dbacfc77b780d 379 PANTHER PTHR11089:SF34 4 379 5.2E-160 T 22-04-2016 LMES_RS07780 c6d5a9ee23e63c46254dbacfc77b780d 379 PANTHER PTHR11089 4 379 5.2E-160 T 22-04-2016 LMES_RS07780 c6d5a9ee23e63c46254dbacfc77b780d 379 Pfam PF01926 50S ribosome-binding GTPase 181 246 7.8E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS07780 c6d5a9ee23e63c46254dbacfc77b780d 379 Gene3D G3DSA:3.40.50.300 88 240 2.6E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07780 c6d5a9ee23e63c46254dbacfc77b780d 379 SUPERFAMILY SSF52540 79 294 3.19E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07780 c6d5a9ee23e63c46254dbacfc77b780d 379 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 19 379 7.6E-140 T 22-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH LMES_RS05510 38845c77bfed002603f1078b379ecafd 143 PANTHER PTHR33799 4 143 2.1E-13 T 22-04-2016 LMES_RS05510 38845c77bfed002603f1078b379ecafd 143 Pfam PF03610 PTS system fructose IIA component 4 120 4.6E-23 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LMES_RS05510 38845c77bfed002603f1078b379ecafd 143 SUPERFAMILY SSF53062 1 132 1.96E-26 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LMES_RS05510 38845c77bfed002603f1078b379ecafd 143 Gene3D G3DSA:3.40.50.510 1 140 6.6E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 141 3.7E-32 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 PIRSF PIRSF002070 1 140 6.6E-29 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 Pfam PF00436 Single-strand binding protein family 1 100 3.0E-26 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 SUPERFAMILY SSF50249 1 141 3.43E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 PANTHER PTHR10302 126 140 1.2E-24 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 PANTHER PTHR10302 1 109 1.2E-24 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 Gene3D G3DSA:2.40.50.140 1 141 5.9E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS07465 194fc9343b6fa87ec59a157d94ac9f87 141 Hamap MF_00984 Single-stranded DNA-binding protein. 1 105 26.58 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LMES_RS02710 ee3a22aa897adb5f475e765d17dc9d4d 212 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 67 203 3.0E-26 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LMES_RS02710 ee3a22aa897adb5f475e765d17dc9d4d 212 PANTHER PTHR33308 39 210 2.8E-28 T 22-04-2016 LMES_RS02710 ee3a22aa897adb5f475e765d17dc9d4d 212 PANTHER PTHR33308:SF3 39 210 2.8E-28 T 22-04-2016 LMES_RS02710 ee3a22aa897adb5f475e765d17dc9d4d 212 SMART SM00047 50 208 1.5E-37 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LMES_RS03050 d9391227ca534a2dfea1326b575219d6 647 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 478 626 7.7E-23 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LMES_RS03050 d9391227ca534a2dfea1326b575219d6 647 PANTHER PTHR30250:SF6 106 646 9.9E-110 T 22-04-2016 LMES_RS03050 d9391227ca534a2dfea1326b575219d6 647 Pfam PF01943 Polysaccharide biosynthesis protein 116 421 3.6E-33 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LMES_RS03050 d9391227ca534a2dfea1326b575219d6 647 PANTHER PTHR30250 106 646 9.9E-110 T 22-04-2016 LMES_RS01560 8a99826109ad34fb186ab5c5bbfd6fb2 133 PANTHER PTHR35813:SF1 1 124 2.2E-16 T 22-04-2016 LMES_RS01560 8a99826109ad34fb186ab5c5bbfd6fb2 133 PANTHER PTHR35813 1 124 2.2E-16 T 22-04-2016 LMES_RS01560 8a99826109ad34fb186ab5c5bbfd6fb2 133 Pfam PF04304 Protein of unknown function (DUF454) 2 111 2.3E-25 T 22-04-2016 IPR007401 Protein of unknown function DUF454 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 Gene3D G3DSA:3.90.76.10 63 165 9.3E-30 T 22-04-2016 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 PIRSF PIRSF002741 3 531 1.6E-71 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 455 1.7E-58 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 SUPERFAMILY SSF53850 29 530 2.41E-91 T 22-04-2016 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 PANTHER PTHR30290:SF10 1 530 2.4E-105 T 22-04-2016 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 Gene3D G3DSA:3.10.105.10 302 503 2.9E-36 T 22-04-2016 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 PANTHER PTHR30290 1 530 2.4E-105 T 22-04-2016 LMES_RS08070 57c7278e3841e6ddad9c177581d92572 531 Gene3D G3DSA:3.40.190.10 166 301 6.3E-33 T 22-04-2016 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SMART SM01058 492 591 1.1E-50 T 22-04-2016 IPR003711 CarD-like/TRCF domain LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SUPERFAMILY SSF52540 376 482 9.56E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 PANTHER PTHR14025 404 1108 0.0 T 22-04-2016 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Pfam PF00271 Helicase conserved C-terminal domain 820 925 6.8E-17 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SMART SM00982 1022 1122 3.5E-34 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 PANTHER PTHR14025:SF21 404 1108 0.0 T 22-04-2016 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SUPERFAMILY SSF143517 1014 1149 2.09E-28 T 22-04-2016 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1129 28.186 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SMART SM00490 842 926 8.8E-19 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Pfam PF00270 DEAD/DEAH box helicase 620 781 6.6E-15 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Gene3D G3DSA:3.40.50.300 605 802 8.3E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 154 1095 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SUPERFAMILY SSF141259 484 562 2.88E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SUPERFAMILY SSF52540 538 799 4.14E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Pfam PF03461 TRCF domain 1024 1114 1.1E-25 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Pfam PF02559 CarD-like/TRCF domain 493 590 8.6E-29 T 22-04-2016 IPR003711 CarD-like/TRCF domain LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SUPERFAMILY SSF52540 23 365 1.29E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Gene3D G3DSA:3.30.2060.10 138 215 2.3E-12 T 22-04-2016 LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SUPERFAMILY SSF52540 798 1003 6.95E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Gene3D G3DSA:3.40.50.300 24 80 6.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Gene3D G3DSA:3.40.50.300 261 317 6.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 SMART SM00487 615 806 2.8E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS01890 9ac2a95ec61a1638314e2877d2dec02e 1179 Gene3D G3DSA:3.40.50.300 815 972 7.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 SUPERFAMILY SSF53187 5 79 8.22E-58 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 SUPERFAMILY SSF53187 171 347 8.22E-58 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 PANTHER PTHR32481:SF0 1 355 2.6E-128 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 SUPERFAMILY SSF101821 69 179 1.18E-23 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 Pfam PF05343 M42 glutamyl aminopeptidase 46 334 1.6E-87 T 22-04-2016 IPR008007 Peptidase M42 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 PANTHER PTHR32481 1 355 2.6E-128 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 Gene3D G3DSA:3.40.630.10 1 76 4.1E-71 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 Gene3D G3DSA:3.40.630.10 171 352 4.1E-71 T 22-04-2016 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 Gene3D G3DSA:2.40.30.40 77 161 6.1E-25 T 22-04-2016 IPR023367 Peptidase M42, domain 2 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 PIRSF PIRSF001123 2 354 4.8E-114 T 22-04-2016 IPR008007 Peptidase M42 LMES_RS07135 825aa3430c887bfa252be9c225eb23ae 355 TIGRFAM TIGR03107 glu_aminopep: glutamyl aminopeptidase 6 353 1.2E-181 T 22-04-2016 IPR017538 Peptidase M42, glutamyl aminopeptidase MetaCyc: PWY-5706|MetaCyc: PWY-5707|MetaCyc: PWY-7614 LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 28 215 1.2E-52 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 PANTHER PTHR23417:SF14 4 217 8.3E-55 T 22-04-2016 LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 SUPERFAMILY SSF53335 21 216 4.91E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 Pfam PF02390 Putative methyltransferase 41 214 1.9E-42 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 Gene3D G3DSA:3.40.50.150 44 160 2.9E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 218 26.07 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LMES_RS05400 19c7213b2ea74f40b96c6ad4840de1ab 219 PANTHER PTHR23417 4 217 8.3E-55 T 22-04-2016 LMES_RS08155 fa6238bb81ecf3c3c48424f6ed31a4ba 402 PANTHER PTHR13285 12 395 1.4E-44 T 22-04-2016 LMES_RS08155 fa6238bb81ecf3c3c48424f6ed31a4ba 402 PIRSF PIRSF500216 3 400 1.8E-171 T 22-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 LMES_RS08155 fa6238bb81ecf3c3c48424f6ed31a4ba 402 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 5 395 5.7E-167 T 22-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 LMES_RS08155 fa6238bb81ecf3c3c48424f6ed31a4ba 402 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 138 386 8.0E-13 T 22-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT LMES_RS08155 fa6238bb81ecf3c3c48424f6ed31a4ba 402 PIRSF PIRSF016636 6 394 2.3E-77 T 22-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 190 1.8E-72 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 Gene3D G3DSA:3.40.50.300 7 193 6.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 Pfam PF01926 50S ribosome-binding GTPase 25 143 1.1E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 PANTHER PTHR11649 1 192 1.9E-52 T 22-04-2016 LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 194 29.068 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 SUPERFAMILY SSF52540 1 194 6.42E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06735 1a5f9787ba46f46940452810ec5d9ad4 194 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 161 3.8E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LMES_RS01785 f36a906ad424c46533d0edc94436e2bd 244 Pfam PF00561 alpha/beta hydrolase fold 26 126 2.3E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS01785 f36a906ad424c46533d0edc94436e2bd 244 Gene3D G3DSA:3.40.50.1820 7 236 2.4E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS01785 f36a906ad424c46533d0edc94436e2bd 244 PANTHER PTHR10992 10 238 1.4E-36 T 22-04-2016 LMES_RS01785 f36a906ad424c46533d0edc94436e2bd 244 SUPERFAMILY SSF53474 6 236 5.18E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS07320 5ac33f01b0f921258db34b663b66115c 160 Pfam PF16774 Baseplate protein 2 143 6.1E-12 T 22-04-2016 IPR031899 Baseplate protein LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 Gene3D G3DSA:3.40.710.10 286 678 2.9E-79 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 Gene3D G3DSA:1.10.3810.10 106 285 1.3E-65 T 22-04-2016 LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 Pfam PF00905 Penicillin binding protein transpeptidase domain 379 624 6.1E-27 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 PANTHER PTHR32282 30 694 4.2E-167 T 22-04-2016 LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 Pfam PF00912 Transglycosylase 109 283 1.8E-60 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 SUPERFAMILY SSF56601 267 287 4.51E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 SUPERFAMILY SSF56601 324 679 4.51E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 SUPERFAMILY SSF53955 94 308 1.12E-65 T 22-04-2016 IPR023346 Lysozyme-like domain LMES_RS03130 b0f9808efe58f155d3feb72c3baa798b 730 PANTHER PTHR32282:SF0 30 694 4.2E-167 T 22-04-2016 LMES_RS00335 daee8fc09e0e63c7171dfab63a2a4ec9 87 PANTHER PTHR10245 23 85 2.5E-12 T 22-04-2016 LMES_RS00335 daee8fc09e0e63c7171dfab63a2a4ec9 87 SMART SM00530 29 84 9.2E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00335 daee8fc09e0e63c7171dfab63a2a4ec9 87 Gene3D G3DSA:1.10.260.40 22 85 2.1E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00335 daee8fc09e0e63c7171dfab63a2a4ec9 87 Pfam PF01381 Helix-turn-helix 30 79 5.0E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00335 daee8fc09e0e63c7171dfab63a2a4ec9 87 SUPERFAMILY SSF47413 25 85 9.92E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS06225 bd6a75fab52fe578e0c4ba47e15937df 280 Gene3D G3DSA:3.40.50.720 1 226 1.1E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06225 bd6a75fab52fe578e0c4ba47e15937df 280 PANTHER PTHR10491:SF4 1 279 1.9E-96 T 22-04-2016 LMES_RS06225 bd6a75fab52fe578e0c4ba47e15937df 280 SUPERFAMILY SSF51735 1 278 4.3E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06225 bd6a75fab52fe578e0c4ba47e15937df 280 Pfam PF04321 RmlD substrate binding domain 1 278 1.7E-106 T 22-04-2016 IPR029903 RmlD-like substrate binding domain LMES_RS06225 bd6a75fab52fe578e0c4ba47e15937df 280 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 277 4.2E-88 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LMES_RS06225 bd6a75fab52fe578e0c4ba47e15937df 280 PANTHER PTHR10491 1 279 1.9E-96 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LMES_RS01450 0754c2a27916b04a26812e04bf2d0486 79 Pfam PF00550 Phosphopantetheine attachment site 11 72 5.9E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS01450 0754c2a27916b04a26812e04bf2d0486 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 76 3.0E-6 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LMES_RS01450 0754c2a27916b04a26812e04bf2d0486 79 Gene3D G3DSA:1.10.1200.10 5 76 5.5E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS01450 0754c2a27916b04a26812e04bf2d0486 79 Hamap MF_01217 Acyl carrier protein [acpP]. 5 77 15.436 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LMES_RS01450 0754c2a27916b04a26812e04bf2d0486 79 SUPERFAMILY SSF47336 1 77 7.2E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 PANTHER PTHR24220 11 281 4.5E-141 T 22-04-2016 LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 266 5.5E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 SUPERFAMILY SSF52540 9 254 6.78E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 Pfam PF00005 ABC transporter 31 182 2.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 Gene3D G3DSA:3.40.50.300 7 258 5.0E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 SMART SM00382 39 232 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS08700 c1276d569698b92862f8f0c725c73a04 311 PANTHER PTHR24220:SF336 11 281 4.5E-141 T 22-04-2016 LMES_RS04365 8e87a17d5eab693d347b9ad982b236c8 190 TIGRFAM TIGR03110 exosort_Gpos: exosortase family protein XrtG 6 187 1.8E-63 T 22-04-2016 IPR017541 Exosortase family protein XrtG LMES_RS04365 8e87a17d5eab693d347b9ad982b236c8 190 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 4 174 1.4E-8 T 22-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS04365 8e87a17d5eab693d347b9ad982b236c8 190 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 91 178 5.3E-18 T 22-04-2016 IPR026392 Exosortase/Archaeosortase domain LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SMART SM00958 242 354 2.8E-56 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Gene3D G3DSA:3.90.1440.10 247 364 2.2E-42 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 ProSitePatterns PS01312 SecA family signature. 496 511 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Pfam PF07517 SecA DEAD-like domain 8 397 5.0E-117 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Gene3D G3DSA:1.10.3060.10 615 797 1.2E-47 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SUPERFAMILY SSF81886 588 800 5.62E-66 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SUPERFAMILY SSF52540 364 411 1.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SUPERFAMILY SSF52540 11 242 1.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Pfam PF01043 SecA preprotein cross-linking domain 247 354 2.3E-33 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PANTHER PTHR30612 70 801 0.0 T 22-04-2016 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PANTHER PTHR30612 1 54 0.0 T 22-04-2016 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Gene3D G3DSA:3.40.50.300 413 585 2.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SUPERFAMILY SSF81767 241 364 9.02E-42 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 76 100 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 114 128 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 409 422 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 183 203 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 372 389 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 130 140 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 PRINTS PR00906 SecA protein signature 335 357 6.0E-65 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SUPERFAMILY SSF52540 412 584 2.07E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 512 1.5E-216 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Gene3D G3DSA:3.40.50.300 10 242 1.6E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Gene3D G3DSA:3.40.50.300 365 412 1.6E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 SMART SM00957 5 398 6.1E-251 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 798 18.676 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Pfam PF07516 SecA Wing and Scaffold domain 585 795 1.4E-56 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LMES_RS00840 e675dc10395298cf5a7683ef37ecbec0 803 Pfam PF00271 Helicase conserved C-terminal domain 430 546 1.2E-4 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS01790 65bcfa74f9429d739c24a531765e2834 844 PANTHER PTHR34697:SF2 1 825 2.7E-131 T 22-04-2016 LMES_RS01790 65bcfa74f9429d739c24a531765e2834 844 SUPERFAMILY SSF55729 632 806 2.81E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01790 65bcfa74f9429d739c24a531765e2834 844 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 521 808 7.1E-86 T 22-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal LMES_RS01790 65bcfa74f9429d739c24a531765e2834 844 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 116 282 1.2E-7 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LMES_RS01790 65bcfa74f9429d739c24a531765e2834 844 PANTHER PTHR34697 1 825 2.7E-131 T 22-04-2016 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 PANTHER PTHR10314 7 367 1.0E-137 T 22-04-2016 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 TIGRFAM TIGR02079 THD1: threonine dehydratase 11 421 8.2E-166 T 22-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 Gene3D G3DSA:3.40.50.1100 75 334 2.3E-69 T 22-04-2016 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 419 1.3E-20 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 SUPERFAMILY SSF53686 10 365 2.49E-86 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 PANTHER PTHR10314:SF30 7 367 1.0E-137 T 22-04-2016 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LMES_RS08840 b19019975d59cc94cd6eddefcaf8ee41 421 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 315 3.5E-67 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 232 2.1E-42 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 SUPERFAMILY SSF56784 3 255 4.41E-65 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 256 3.1E-95 T 22-04-2016 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 109 4.3E-24 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 PANTHER PTHR19288:SF3 1 257 2.2E-82 T 22-04-2016 LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 Gene3D G3DSA:3.40.50.10410 78 180 2.6E-39 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 Gene3D G3DSA:3.40.50.1000 181 255 8.7E-39 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 Gene3D G3DSA:3.40.50.1000 3 77 8.7E-39 T 22-04-2016 IPR023214 HAD-like domain LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 PANTHER PTHR19288 1 257 2.2E-82 T 22-04-2016 LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 PIRSF PIRSF000915 1 255 8.0E-55 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA LMES_RS00190 75d6694025d8c5740fb9b01c3a763841 258 Pfam PF13242 HAD-hyrolase-like 183 254 9.1E-16 T 22-04-2016 LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 Pfam PF02381 MraZ protein, putative antitoxin-like 73 141 5.1E-20 T 22-04-2016 IPR020603 MraZ domain LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 3.6E-16 T 22-04-2016 IPR020603 MraZ domain LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 PANTHER PTHR34701 2 143 2.5E-48 T 22-04-2016 LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 SUPERFAMILY SSF89447 1 136 1.05E-48 T 22-04-2016 LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 1.0E-41 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 1.2E-44 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LMES_RS06640 fbdd3200c7ba4b24ace6d93739860fb5 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 52.484 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LMES_RS07390 89942fcc9a9e866217ec273ad54dbccb 187 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 43 164 5.5E-22 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family LMES_RS07390 89942fcc9a9e866217ec273ad54dbccb 187 Pfam PF05119 Phage terminase, small subunit 54 163 1.0E-21 T 22-04-2016 IPR006448 Putative phage terminase, small subunit, P27 family LMES_RS09070 38704b10907d23f08a6297204465031d 78 Gene3D G3DSA:3.40.630.30 22 76 3.3E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS09070 38704b10907d23f08a6297204465031d 78 SUPERFAMILY SSF55729 23 70 7.21E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08355 1d8db0833d09b3e9324c61e6802eab75 369 PANTHER PTHR21716:SF10 9 354 7.8E-98 T 22-04-2016 LMES_RS08355 1d8db0833d09b3e9324c61e6802eab75 369 PANTHER PTHR21716 9 354 7.8E-98 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LMES_RS08355 1d8db0833d09b3e9324c61e6802eab75 369 Pfam PF01594 Domain of unknown function DUF20 37 355 2.6E-72 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 SMART SM00345 12 71 6.3E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 Gene3D G3DSA:3.30.70.1450 134 203 6.6E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 Gene3D G3DSA:1.10.10.10 5 76 3.9E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 SUPERFAMILY SSF116726 124 204 3.92E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 Pfam PF02080 TrkA-C domain 135 203 5.0E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 SUPERFAMILY SSF46785 6 82 1.63E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 PANTHER PTHR30445 123 205 3.0E-13 T 22-04-2016 LMES_RS01675 86bb76f235670aba6ea35e0779a6bfc3 205 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 8.1E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 77 87 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 SMART SM00870 3 314 1.7E-130 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 Gene3D G3DSA:3.40.50.1170 1 203 6.9E-60 T 22-04-2016 IPR027474 L-asparaginase, N-terminal LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 Gene3D G3DSA:3.40.50.40 204 317 1.8E-27 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PANTHER PTHR11707:SF29 3 309 2.0E-50 T 22-04-2016 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 SUPERFAMILY SSF53774 1 317 3.66E-92 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PIRSF PIRSF001220 1 318 6.7E-88 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PANTHER PTHR11707 3 309 2.0E-50 T 22-04-2016 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 Pfam PF00710 Asparaginase, N-terminal 3 187 5.9E-55 T 22-04-2016 IPR027474 L-asparaginase, N-terminal LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.3E-14 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PRINTS PR00139 Asparaginase/glutaminase family signature 76 94 2.3E-14 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PRINTS PR00139 Asparaginase/glutaminase family signature 136 154 2.3E-14 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 PIRSF PIRSF500176 1 319 2.7E-87 T 22-04-2016 LMES_RS03760 d50be466c08b439728e2a31a0c0cb936 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 PANTHER PTHR30204:SF2 1 122 1.9E-35 T 22-04-2016 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 Gene3D G3DSA:1.10.1660.10 57 121 1.2E-9 T 22-04-2016 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 Gene3D G3DSA:1.10.1660.10 1 56 1.0E-21 T 22-04-2016 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 SMART SM00422 1 70 1.5E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.3E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.3E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 PANTHER PTHR30204 1 122 1.9E-35 T 22-04-2016 LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 SUPERFAMILY SSF46955 1 117 8.42E-29 T 22-04-2016 IPR009061 Putative DNA-binding domain LMES_RS04675 fdb3a72bc144572077d73ada9ae2d707 128 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.8E-16 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.1E-42 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 22.727 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 9.0E-19 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 SUPERFAMILY SSF54736 52 121 3.84E-22 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 Gene3D G3DSA:3.30.1390.10 51 121 5.7E-30 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 Gene3D G3DSA:1.20.5.710 2 50 4.3E-19 T 22-04-2016 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 1.4E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 SUPERFAMILY SSF48300 3 51 8.63E-13 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01260 cb4e43c2d682bc0ea6fdfab954ef084d 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 2.2E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 SUPERFAMILY SSF52440 2 103 1.58E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 SUPERFAMILY SSF56059 104 316 1.1E-53 T 22-04-2016 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 3 102 2.9E-29 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 PANTHER PTHR10520 1 412 7.6E-165 T 22-04-2016 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Gene3D G3DSA:3.90.600.10 326 410 1.2E-18 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 408 4.3E-17 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 2 411 34.84 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 SMART SM01210 325 411 2.4E-24 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 3 411 5.4E-132 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 SMART SM01209 103 292 2.2E-96 T 22-04-2016 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Gene3D G3DSA:3.40.50.20 3 95 4.9E-30 T 22-04-2016 IPR016185 Pre-ATP-grasp domain LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Gene3D G3DSA:3.30.470.20 187 320 1.1E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Gene3D G3DSA:3.30.1490.20 124 186 5.6E-15 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 292 2.8E-63 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03365 8d7caf8d7140ab08d4bec9d34610811d 414 SUPERFAMILY SSF51246 324 411 2.04E-19 T 22-04-2016 IPR011054 Rudiment single hybrid motif LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PANTHER PTHR11451:SF5 3 651 4.4E-250 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 333 539 2.3E-28 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 646 31.076 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 638 1.2E-198 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 SUPERFAMILY SSF55681 246 537 2.59E-92 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Gene3D G3DSA:3.40.50.800 542 648 2.0E-28 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PANTHER PTHR11451 3 651 4.4E-250 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 SUPERFAMILY SSF52954 540 648 1.81E-25 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 SUPERFAMILY SSF81271 4 63 4.9E-10 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 SUPERFAMILY SSF55186 66 244 5.89E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Pfam PF02824 TGS domain 7 53 9.5E-6 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Pfam PF03129 Anticodon binding domain 552 637 8.9E-19 T 22-04-2016 IPR004154 Anticodon-binding LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Gene3D G3DSA:3.30.930.10 245 541 2.5E-98 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Gene3D G3DSA:3.10.20.30 3 66 8.2E-15 T 22-04-2016 IPR012675 Beta-grasp domain LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 518 531 2.1E-47 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 335 363 2.1E-47 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 545 557 2.1E-47 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 368 391 2.1E-47 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 PRINTS PR01047 Threonyl-tRNA synthetase signature 474 502 2.1E-47 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Gene3D G3DSA:3.30.980.10 68 135 2.2E-33 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Gene3D G3DSA:3.30.980.10 191 226 2.2E-33 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Gene3D G3DSA:3.30.54.20 136 187 9.3E-11 T 22-04-2016 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 SMART SM00863 173 222 1.6E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LMES_RS03175 1ebde8cddd533e94d766dd9d07a53a58 652 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 178 222 7.6E-8 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 Gene3D G3DSA:3.30.390.30 339 451 2.3E-28 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.4E-25 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 1.4E-25 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.4E-25 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 1.4E-25 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-25 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 Gene3D G3DSA:3.50.50.60 1 115 1.7E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 Gene3D G3DSA:3.50.50.60 116 317 2.5E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PANTHER PTHR22912 3 448 2.4E-82 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 335 437 5.8E-7 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 SUPERFAMILY SSF51905 1 288 7.38E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 2.7E-15 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 2.7E-15 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.7E-15 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.7E-15 T 22-04-2016 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 SUPERFAMILY SSF55424 327 452 1.29E-27 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 286 6.3E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS00475 953b6b4fba8ded6646df41b8c1242619 456 PANTHER PTHR22912:SF140 3 448 2.4E-82 T 22-04-2016 LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 Pfam PF02272 DHHA1 domain 381 442 1.0E-6 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 SUPERFAMILY SSF64182 56 442 2.22E-111 T 22-04-2016 LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 26 559 7.0E-164 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 PANTHER PTHR30255:SF2 1 566 4.3E-195 T 22-04-2016 LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 PANTHER PTHR30255 1 566 4.3E-195 T 22-04-2016 LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 Pfam PF01368 DHH family 81 231 1.1E-13 T 22-04-2016 IPR001667 DDH domain LMES_RS06505 0aa22541cca66f7781a88ac991739046 655 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 562 653 2.3E-21 T 22-04-2016 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal LMES_RS03835 62dcc4dd25ca114a9185f4f45c8fc93b 310 PANTHER PTHR12304 2 306 4.5E-91 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LMES_RS03835 62dcc4dd25ca114a9185f4f45c8fc93b 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 292 7.6E-64 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03835 62dcc4dd25ca114a9185f4f45c8fc93b 310 Gene3D G3DSA:3.90.245.10 2 301 5.9E-91 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03835 62dcc4dd25ca114a9185f4f45c8fc93b 310 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 7 17 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 LMES_RS03835 62dcc4dd25ca114a9185f4f45c8fc93b 310 PANTHER PTHR12304:SF15 2 306 4.5E-91 T 22-04-2016 LMES_RS03835 62dcc4dd25ca114a9185f4f45c8fc93b 310 SUPERFAMILY SSF53590 1 303 2.35E-87 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 Pfam PF01933 Uncharacterised protein family UPF0052 5 296 3.6E-89 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 Gene3D G3DSA:3.40.50.10680 75 321 4.3E-56 T 22-04-2016 LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 Hamap MF_00973 Gluconeogenesis factor. 1 321 31.992 T 22-04-2016 IPR010119 Gluconeogenesis factor LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 PANTHER PTHR30135:SF3 2 321 3.8E-116 T 22-04-2016 LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 5 319 2.3E-102 T 22-04-2016 IPR010119 Gluconeogenesis factor LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 PANTHER PTHR30135 2 321 3.8E-116 T 22-04-2016 LMES_RS01865 4d889bae07f76a11c92f02449942c323 322 SUPERFAMILY SSF142338 2 316 7.32E-94 T 22-04-2016 LMES_RS04540 e89c020e2b958703762fc20aad780745 411 PIRSF PIRSF006351 1 411 5.7E-83 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LMES_RS04540 e89c020e2b958703762fc20aad780745 411 PANTHER PTHR33989 1 405 2.7E-97 T 22-04-2016 LMES_RS04540 e89c020e2b958703762fc20aad780745 411 Pfam PF02378 Phosphotransferase system, EIIC 27 333 4.7E-27 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS04540 e89c020e2b958703762fc20aad780745 411 PANTHER PTHR33989:SF2 1 405 2.7E-97 T 22-04-2016 LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 PANTHER PTHR10108 307 390 1.7E-109 T 22-04-2016 LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 PANTHER PTHR10108 102 290 1.7E-109 T 22-04-2016 LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 PIRSF PIRSF003085 4 390 1.7E-124 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 SUPERFAMILY SSF53335 113 374 3.04E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 PANTHER PTHR10108:SF743 307 390 1.7E-109 T 22-04-2016 LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 PANTHER PTHR10108:SF743 102 290 1.7E-109 T 22-04-2016 LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 Gene3D G3DSA:3.40.50.150 103 374 5.0E-92 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03800 6a3b75ba3baf62be99a0163444f82806 398 Pfam PF02353 Mycolic acid cyclopropane synthetase 104 369 6.6E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 SMART SM01131 179 301 1.3E-54 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 Pfam PF02833 DHHA2 domain 181 298 7.1E-16 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 Pfam PF01368 DHH family 3 143 4.1E-20 T 22-04-2016 IPR001667 DDH domain LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 PANTHER PTHR12112 4 301 1.3E-92 T 22-04-2016 LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 PANTHER PTHR12112:SF17 4 301 1.3E-92 T 22-04-2016 LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 SUPERFAMILY SSF64182 3 300 3.66E-67 T 22-04-2016 LMES_RS05930 496b89e100894bcab12d9c81245b3b97 301 Gene3D G3DSA:3.90.1640.10 3 184 4.3E-51 T 22-04-2016 LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 115 2.9E-17 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 SUPERFAMILY SSF55347 130 293 1.46E-15 T 22-04-2016 LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 PANTHER PTHR22604 1 322 8.3E-86 T 22-04-2016 LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 Gene3D G3DSA:3.30.360.10 138 331 3.2E-54 T 22-04-2016 LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 Gene3D G3DSA:3.40.50.720 1 137 1.6E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 SUPERFAMILY SSF51735 2 140 2.55E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02515 133ca6a479ea090360c2418ee503de85 334 PANTHER PTHR22604:SF76 1 322 8.3E-86 T 22-04-2016 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 563 1.2E-144 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 83 3.2E-15 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 SUPERFAMILY SSF47323 445 563 5.49E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 PANTHER PTHR11956:SF1 1 563 6.0E-216 T 22-04-2016 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 SMART SM01016 5 83 1.7E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 SUPERFAMILY SSF55190 7 104 6.93E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Pfam PF00750 tRNA synthetases class I (R) 110 436 9.7E-91 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Pfam PF05746 DALR anticodon binding domain 451 563 6.6E-27 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 1.6E-20 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 298 319 1.6E-20 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 1.6E-20 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 1.6E-20 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 563 24.884 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 SUPERFAMILY SSF52374 108 445 6.19E-99 T 22-04-2016 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Gene3D G3DSA:3.40.50.620 109 444 1.7E-110 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 SMART SM00836 451 563 1.7E-31 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 PANTHER PTHR11956 1 563 6.0E-216 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Gene3D G3DSA:3.30.1360.70 6 96 1.6E-26 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LMES_RS05355 6c6e822648a18aa110aa9f8d2303f8a9 563 Gene3D G3DSA:1.10.730.10 445 563 2.8E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS04200 e2643d389f16fb15d3748357399c2446 180 SUPERFAMILY SSF52218 3 174 6.01E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain LMES_RS04200 e2643d389f16fb15d3748357399c2446 180 PANTHER PTHR30543 1 179 1.4E-42 T 22-04-2016 LMES_RS04200 e2643d389f16fb15d3748357399c2446 180 PANTHER PTHR30543:SF6 1 179 1.4E-42 T 22-04-2016 LMES_RS04200 e2643d389f16fb15d3748357399c2446 180 Pfam PF03358 NADPH-dependent FMN reductase 3 147 3.2E-31 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LMES_RS04200 e2643d389f16fb15d3748357399c2446 180 Gene3D G3DSA:3.40.50.360 1 179 4.9E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 160 22.28 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 PANTHER PTHR22881 39 160 1.1E-38 T 22-04-2016 LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 SUPERFAMILY SSF55486 16 159 9.52E-39 T 22-04-2016 LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 157 2.2E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 125 135 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 Pfam PF02130 Uncharacterized protein family UPF0054 17 155 2.9E-42 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LMES_RS03740 6788ae84f9f97fccc9735917bbe0b363 160 Gene3D G3DSA:3.40.390.30 7 159 1.2E-45 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PANTHER PTHR10458:SF8 1 192 5.2E-65 T 22-04-2016 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PRINTS PR01576 Peptide deformylase signature 149 178 8.0E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PRINTS PR01576 Peptide deformylase signature 117 128 8.0E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PRINTS PR01576 Peptide deformylase signature 50 79 8.0E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PRINTS PR01576 Peptide deformylase signature 130 148 8.0E-27 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 SUPERFAMILY SSF56420 4 187 3.27E-56 T 22-04-2016 IPR023635 Peptide deformylase LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 Gene3D G3DSA:3.90.45.10 6 189 8.3E-53 T 22-04-2016 IPR023635 Peptide deformylase LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PIRSF PIRSF004749 1 192 5.3E-39 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 Pfam PF01327 Polypeptide deformylase 7 180 1.1E-42 T 22-04-2016 IPR023635 Peptide deformylase LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 Hamap MF_00163 Peptide deformylase [def]. 6 191 25.902 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 9 188 2.6E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS05845 27f5078e822ca595ee770b018dedbaa9 192 PANTHER PTHR10458 1 192 5.2E-65 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LMES_RS00220 2fe75d2b967dc6c3ee6b05653cd31a41 146 Pfam PF00376 MerR family regulatory protein 20 49 2.4E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS00220 2fe75d2b967dc6c3ee6b05653cd31a41 146 SUPERFAMILY SSF46955 18 92 7.33E-14 T 22-04-2016 IPR009061 Putative DNA-binding domain LMES_RS00220 2fe75d2b967dc6c3ee6b05653cd31a41 146 SMART SM00422 18 88 5.2E-4 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS00220 2fe75d2b967dc6c3ee6b05653cd31a41 146 Gene3D G3DSA:1.10.1660.10 18 74 5.4E-12 T 22-04-2016 LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 Pfam PF02080 TrkA-C domain 150 217 9.8E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 Pfam PF02254 TrkA-N domain 5 120 8.8E-28 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 SUPERFAMILY SSF51735 4 135 1.2E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 Gene3D G3DSA:3.30.70.1450 145 218 1.2E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 Gene3D G3DSA:3.40.50.720 2 139 2.2E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 SUPERFAMILY SSF116726 131 216 7.06E-19 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LMES_RS00315 d510e41aa6b518499c875e98b7543b52 221 PANTHER PTHR16254 5 159 1.5E-45 T 22-04-2016 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 8 336 2.6E-106 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 PIRSF PIRSF003314 3 347 9.5E-107 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 6 337 32.484 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 PANTHER PTHR10578 240 345 2.5E-88 T 22-04-2016 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 PANTHER PTHR10578 33 222 2.5E-88 T 22-04-2016 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 PANTHER PTHR10578:SF3 240 345 2.5E-88 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 PANTHER PTHR10578:SF3 33 222 2.5E-88 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 Pfam PF01070 FMN-dependent dehydrogenase 153 331 2.8E-12 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 Gene3D G3DSA:3.20.20.70 32 334 4.0E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS06060 4ee08d6800d597d5fdb2390bd592f819 350 SUPERFAMILY SSF51395 31 343 2.84E-70 T 22-04-2016 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 PANTHER PTHR20857:SF20 1 205 1.3E-51 T 22-04-2016 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 194 3.2E-51 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 PANTHER PTHR20857 1 205 1.3E-51 T 22-04-2016 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 Gene3D G3DSA:3.20.20.70 10 209 1.7E-56 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 205 1.0E-52 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 212 24.426 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS02325 b944d5c3ae8c8951305a0bbc1c972c11 212 SUPERFAMILY SSF51391 10 210 2.62E-54 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS08875 2b2ce128475d276ca01c33d7f45949b3 166 PIRSF PIRSF006181 4 166 1.6E-52 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LMES_RS08875 2b2ce128475d276ca01c33d7f45949b3 166 Pfam PF04073 Aminoacyl-tRNA editing domain 40 152 1.7E-18 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS08875 2b2ce128475d276ca01c33d7f45949b3 166 PANTHER PTHR30411:SF0 1 164 9.7E-37 T 22-04-2016 LMES_RS08875 2b2ce128475d276ca01c33d7f45949b3 166 PANTHER PTHR30411 1 164 9.7E-37 T 22-04-2016 LMES_RS08875 2b2ce128475d276ca01c33d7f45949b3 166 SUPERFAMILY SSF55826 13 162 3.4E-35 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS08875 2b2ce128475d276ca01c33d7f45949b3 166 Gene3D G3DSA:3.90.960.10 2 164 2.5E-43 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LMES_RS04980 bcb65cb403b91e2fb62c46faadf4ddd9 112 SMART SM01022 3 112 1.8E-13 T 22-04-2016 IPR007374 ASCH domain LMES_RS04980 bcb65cb403b91e2fb62c46faadf4ddd9 112 Pfam PF04266 ASCH domain 10 108 2.0E-7 T 22-04-2016 IPR007374 ASCH domain LMES_RS04980 bcb65cb403b91e2fb62c46faadf4ddd9 112 Gene3D G3DSA:3.10.480.10 3 108 9.9E-32 T 22-04-2016 LMES_RS04980 bcb65cb403b91e2fb62c46faadf4ddd9 112 PIRSF PIRSF016134 1 110 2.4E-30 T 22-04-2016 IPR016645 Uncharacterised conserved protein UCP016134 LMES_RS04980 bcb65cb403b91e2fb62c46faadf4ddd9 112 SUPERFAMILY SSF88697 3 108 4.31E-31 T 22-04-2016 IPR015947 PUA-like domain LMES_RS04980 bcb65cb403b91e2fb62c46faadf4ddd9 112 PANTHER PTHR34204 3 107 1.0E-14 T 22-04-2016 LMES_RS06535 ee029816f2d9e523948b374c22354bb9 160 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 155 2.3E-23 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LMES_RS06535 ee029816f2d9e523948b374c22354bb9 160 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 156 2.1E-17 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LMES_RS06535 ee029816f2d9e523948b374c22354bb9 160 PANTHER PTHR10815:SF5 1 155 1.5E-17 T 22-04-2016 LMES_RS06535 ee029816f2d9e523948b374c22354bb9 160 SUPERFAMILY SSF46767 78 156 7.72E-18 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LMES_RS06535 ee029816f2d9e523948b374c22354bb9 160 Gene3D G3DSA:1.10.10.10 77 156 7.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS06535 ee029816f2d9e523948b374c22354bb9 160 PANTHER PTHR10815 1 155 1.5E-17 T 22-04-2016 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 Pfam PF00128 Alpha amylase, catalytic domain 28 379 1.9E-120 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 SMART SM00642 13 423 4.2E-149 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 Gene3D G3DSA:3.20.20.80 175 483 6.6E-118 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 Gene3D G3DSA:3.20.20.80 2 104 6.6E-118 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 PANTHER PTHR10357 416 428 9.3E-227 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 PANTHER PTHR10357 460 538 9.3E-227 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 PANTHER PTHR10357 1 393 9.3E-227 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 SUPERFAMILY SSF51445 4 478 6.71E-146 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 PANTHER PTHR10357:SF142 416 428 9.3E-227 T 22-04-2016 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 PANTHER PTHR10357:SF142 460 538 9.3E-227 T 22-04-2016 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 PANTHER PTHR10357:SF142 1 393 9.3E-227 T 22-04-2016 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 Gene3D G3DSA:3.90.400.10 105 174 3.2E-32 T 22-04-2016 LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 Gene3D G3DSA:2.60.40.1180 486 554 1.3E-19 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 Pfam PF16657 Maltogenic Amylase, C-terminal domain 484 548 3.9E-8 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal LMES_RS03985 bef7764a18026fffe80fad6e0b6267af 556 SUPERFAMILY SSF51011 484 554 2.56E-14 T 22-04-2016 LMES_RS02205 ffb2f424c9ed766d58f8dde4d5e126e7 336 PANTHER PTHR30012 7 335 8.7E-36 T 22-04-2016 LMES_RS02205 ffb2f424c9ed766d58f8dde4d5e126e7 336 Pfam PF00482 Type II secretion system (T2SS), protein F 18 136 2.7E-13 T 22-04-2016 IPR018076 Type II secretion system F domain LMES_RS02205 ffb2f424c9ed766d58f8dde4d5e126e7 336 Pfam PF00482 Type II secretion system (T2SS), protein F 206 326 3.2E-10 T 22-04-2016 IPR018076 Type II secretion system F domain LMES_RS05290 d608acc2c7c67b8d985585e59d81c414 212 SUPERFAMILY SSF69593 8 198 2.48E-39 T 22-04-2016 LMES_RS05290 d608acc2c7c67b8d985585e59d81c414 212 SMART SM00563 36 146 2.3E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LMES_RS05290 d608acc2c7c67b8d985585e59d81c414 212 Gene3D G3DSA:3.40.1130.10 27 198 4.3E-13 T 22-04-2016 LMES_RS05290 d608acc2c7c67b8d985585e59d81c414 212 PANTHER PTHR10434 3 198 6.0E-42 T 22-04-2016 LMES_RS05290 d608acc2c7c67b8d985585e59d81c414 212 PANTHER PTHR10434:SF21 3 198 6.0E-42 T 22-04-2016 LMES_RS05290 d608acc2c7c67b8d985585e59d81c414 212 Pfam PF01553 Acyltransferase 22 143 4.8E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 PANTHER PTHR10366:SF186 2 330 8.6E-113 T 22-04-2016 LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 Gene3D G3DSA:3.40.50.720 1 169 2.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 5.4E-57 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 SUPERFAMILY SSF51735 1 327 4.93E-96 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 Gene3D G3DSA:3.90.25.10 254 329 4.3E-46 T 22-04-2016 LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 Gene3D G3DSA:3.90.25.10 170 222 4.3E-46 T 22-04-2016 LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 PANTHER PTHR10366 2 330 8.6E-113 T 22-04-2016 LMES_RS01320 1764d2186d6ec905b8c33f610b697b8a 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 326 1.1E-127 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 LMES_RS02825 3b1e56ddcd15b3197a02cc9cec12f8a4 293 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 10 276 3.2E-84 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 LMES_RS02825 3b1e56ddcd15b3197a02cc9cec12f8a4 293 Pfam PF12849 PBP superfamily domain 33 262 2.1E-35 T 22-04-2016 IPR024370 PBP domain LMES_RS02825 3b1e56ddcd15b3197a02cc9cec12f8a4 293 SUPERFAMILY SSF53850 38 286 2.94E-70 T 22-04-2016 LMES_RS02825 3b1e56ddcd15b3197a02cc9cec12f8a4 293 PANTHER PTHR30570 37 291 9.6E-118 T 22-04-2016 LMES_RS02825 3b1e56ddcd15b3197a02cc9cec12f8a4 293 Gene3D G3DSA:3.40.190.10 37 170 2.3E-42 T 22-04-2016 LMES_RS02825 3b1e56ddcd15b3197a02cc9cec12f8a4 293 PANTHER PTHR30570:SF4 37 291 9.6E-118 T 22-04-2016 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 Pfam PF00005 ABC transporter 316 461 2.3E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 Pfam PF00005 ABC transporter 23 173 1.8E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 Pfam PF12558 ATP-binding cassette cobalt transporter 239 306 7.7E-13 T 22-04-2016 IPR022216 ABC cobalt transporter GO:0016820 KEGG: 00920+3.6.3.- LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 SUPERFAMILY SSF52540 299 525 3.94E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 PANTHER PTHR24220 315 421 4.4E-133 T 22-04-2016 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 PANTHER PTHR24220 7 276 4.4E-133 T 22-04-2016 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 SMART SM00382 324 510 3.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 SMART SM00382 32 224 1.3E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 PANTHER PTHR24220:SF588 315 421 4.4E-133 T 22-04-2016 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 PANTHER PTHR24220:SF588 7 276 4.4E-133 T 22-04-2016 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 Gene3D G3DSA:3.40.50.300 296 527 7.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 SUPERFAMILY SSF52540 4 236 7.87E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08925 230b50f2be446d3de15a4bccb6cc4227 558 Gene3D G3DSA:3.40.50.300 3 236 1.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 Gene3D G3DSA:2.30.30.30 1 90 1.6E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 3.9E-31 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 PANTHER PTHR12903 1 98 2.0E-47 T 22-04-2016 LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 100 5.4E-37 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 SUPERFAMILY SSF50104 2 100 9.4E-37 T 22-04-2016 IPR008991 Translation protein SH3-like domain LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 Pfam PF00467 KOW motif 6 36 2.2E-6 T 22-04-2016 IPR005824 KOW LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 21.679 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00955 b8b49f67e0cd5edf0433d42e5b728e3a 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02465 c3d0493af4fe7ce14d82df6b3209dec5 469 PIRSF PIRSF006060 1 468 1.0E-59 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS02465 c3d0493af4fe7ce14d82df6b3209dec5 469 Pfam PF00324 Amino acid permease 18 460 2.3E-90 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LMES_RS02465 c3d0493af4fe7ce14d82df6b3209dec5 469 PANTHER PTHR11785:SF28 3 442 1.3E-211 T 22-04-2016 LMES_RS02465 c3d0493af4fe7ce14d82df6b3209dec5 469 PANTHER PTHR11785 3 442 1.3E-211 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS02455 5b4d5c6ad3c8d4f2710175ff09b8f516 195 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 176 13.665 T 22-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 LMES_RS02455 5b4d5c6ad3c8d4f2710175ff09b8f516 195 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 93 2.1E-31 T 22-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 LMES_RS02455 5b4d5c6ad3c8d4f2710175ff09b8f516 195 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 16 81 3.2E-13 T 22-04-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 LMES_RS02455 5b4d5c6ad3c8d4f2710175ff09b8f516 195 PANTHER PTHR41322 2 194 6.7E-33 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.2E-9 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.2E-9 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.2E-9 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.2E-9 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PANTHER PTHR11444:SF2 3 424 3.5E-150 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 5.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 5.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 5.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 5.9E-25 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 SMART SM00998 349 429 7.5E-38 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 Gene3D G3DSA:1.10.40.30 356 429 4.1E-32 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 Gene3D G3DSA:1.10.275.10 3 90 3.6E-30 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 PANTHER PTHR11444 3 424 3.5E-150 T 22-04-2016 IPR000362 Fumarate lyase family LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 Gene3D G3DSA:1.20.200.10 91 355 4.9E-86 T 22-04-2016 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 Pfam PF00206 Lyase 7 285 1.8E-58 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 3.7E-157 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 1.4E-24 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LMES_RS06070 d69b087d083654ac84266c1d6b6232f9 431 SUPERFAMILY SSF48557 3 428 4.71E-127 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 Gene3D G3DSA:2.40.50.140 5 82 2.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 Hamap MF_00201 DNA repair protein RecO [recO]. 1 245 23.134 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 Pfam PF11967 Recombination protein O N terminal 4 79 1.1E-19 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 SUPERFAMILY SSF50249 4 75 2.06E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 245 3.8E-56 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 Pfam PF02565 Recombination protein O C terminal 85 238 9.7E-35 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 PANTHER PTHR33991 1 255 8.1E-41 T 22-04-2016 LMES_RS03755 8a13742cc8edb5f3f29b33b2af303203 259 SUPERFAMILY SSF57863 83 234 7.06E-37 T 22-04-2016 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 SUPERFAMILY SSF52518 356 526 1.07E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03610 7b75f1d16511e66767224325862ab676 541 Gene3D G3DSA:3.40.50.970 10 186 2.3E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03610 7b75f1d16511e66767224325862ab676 541 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 9 417 9.5E-124 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 Gene3D G3DSA:3.40.50.970 356 534 1.0E-26 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03610 7b75f1d16511e66767224325862ab676 541 SUPERFAMILY SSF52518 9 189 7.85E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS03610 7b75f1d16511e66767224325862ab676 541 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 2 540 32.989 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 182 3.4E-27 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 PANTHER PTHR18968:SF114 12 541 1.4E-133 T 22-04-2016 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 PANTHER PTHR18968 12 541 1.4E-133 T 22-04-2016 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 Pfam PF16582 Middle domain of thiamine pyrophosphate 209 375 6.5E-13 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 PIRSF PIRSF004983 1 541 1.7E-146 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 LMES_RS03610 7b75f1d16511e66767224325862ab676 541 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 511 2.1E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LMES_RS03500 6d5bcac49ad4988443693b54a1abcd8c 390 SUPERFAMILY SSF56300 1 286 8.26E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS03500 6d5bcac49ad4988443693b54a1abcd8c 390 Pfam PF00149 Calcineurin-like phosphoesterase 1 197 2.2E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LMES_RS03500 6d5bcac49ad4988443693b54a1abcd8c 390 PANTHER PTHR30337:SF7 1 381 3.8E-59 T 22-04-2016 LMES_RS03500 6d5bcac49ad4988443693b54a1abcd8c 390 PANTHER PTHR30337 1 381 3.8E-59 T 22-04-2016 LMES_RS03500 6d5bcac49ad4988443693b54a1abcd8c 390 Gene3D G3DSA:3.60.21.10 1 236 6.9E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS05770 85d760903c658ddfc41067bf7a3f29fa 99 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 98 1.3E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 LMES_RS05770 85d760903c658ddfc41067bf7a3f29fa 99 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 2 99 22.758 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05770 85d760903c658ddfc41067bf7a3f29fa 99 ProSitePatterns PS01169 Ribosomal protein L21 signature. 69 91 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05770 85d760903c658ddfc41067bf7a3f29fa 99 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 98 4.4E-39 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05770 85d760903c658ddfc41067bf7a3f29fa 99 SUPERFAMILY SSF141091 3 98 9.81E-36 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 LMES_RS05770 85d760903c658ddfc41067bf7a3f29fa 99 PANTHER PTHR21349 1 99 4.2E-38 T 22-04-2016 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 PANTHER PTHR11751:SF417 19 395 2.4E-144 T 22-04-2016 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 Pfam PF00155 Aminotransferase class I and II 36 388 9.0E-57 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 PANTHER PTHR11751 19 395 2.4E-144 T 22-04-2016 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 Gene3D G3DSA:3.90.1150.10 260 394 1.1E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 Gene3D G3DSA:3.40.640.10 50 259 2.6E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS08265 0f296c518aac788ebd57a0122dc363a6 397 SUPERFAMILY SSF53383 11 393 1.08E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 Pfam PF02033 Ribosome-binding factor A 6 110 4.7E-29 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 117 20.487 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 2.9E-32 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 PANTHER PTHR33515 1 117 1.8E-37 T 22-04-2016 LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 Gene3D G3DSA:3.30.300.20 3 116 2.1E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 97 2.0E-29 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 SUPERFAMILY SSF89919 1 113 1.7E-30 T 22-04-2016 IPR023799 Ribosome-binding factor A domain LMES_RS05890 e2c95e566eaf0f50ea80f6fceec07e5f 117 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 PANTHER PTHR10055 3 338 1.0E-169 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 Gene3D G3DSA:3.40.50.620 3 216 3.9E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 PANTHER PTHR10055:SF6 3 338 1.0E-169 T 22-04-2016 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 Gene3D G3DSA:1.10.240.10 217 324 4.7E-37 T 22-04-2016 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 6.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 6.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 6.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.2E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 334 1.3E-78 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 Pfam PF00579 tRNA synthetases class I (W and Y) 6 286 1.7E-57 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LMES_RS08335 5e62ac7a47173ae49b712baee686a106 339 SUPERFAMILY SSF52374 5 334 8.44E-79 T 22-04-2016 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 SUPERFAMILY SSF52518 3 375 5.89E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 413 587 1.5E-74 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 Pfam PF09363 XFP C-terminal domain 600 809 5.5E-63 T 22-04-2016 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 ProSitePatterns PS60003 Phosphoketolase signature 2. 157 175 - T 22-04-2016 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 SUPERFAMILY SSF52518 384 606 2.35E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 PANTHER PTHR31273 6 813 0.0 T 22-04-2016 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 ProSitePatterns PS60002 Phosphoketolase signature 1. 144 150 - T 22-04-2016 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 Pfam PF09364 XFP N-terminal domain 6 391 9.2E-181 T 22-04-2016 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 Gene3D G3DSA:3.40.50.970 52 343 5.6E-18 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 PANTHER PTHR31273:SF0 6 813 0.0 T 22-04-2016 LMES_RS08865 c7df6b67bc28bc9e3668bf32051048f9 813 PIRSF PIRSF017245 1 811 0.0 T 22-04-2016 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 LMES_RS08575 fe0618f147bcfa7f3973e9e26f03c601 179 PANTHER PTHR13256 1 179 1.0E-43 T 22-04-2016 LMES_RS08575 fe0618f147bcfa7f3973e9e26f03c601 179 SUPERFAMILY SSF55729 2 169 1.87E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08575 fe0618f147bcfa7f3973e9e26f03c601 179 Gene3D G3DSA:3.40.630.30 3 177 6.7E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08575 fe0618f147bcfa7f3973e9e26f03c601 179 PANTHER PTHR13256:SF39 1 179 1.0E-43 T 22-04-2016 LMES_RS08575 fe0618f147bcfa7f3973e9e26f03c601 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 145 2.8E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS09045 3c16e8b47a6cbeb500f3e6ca1bfc35a0 318 PANTHER PTHR34821:SF2 165 315 2.0E-41 T 22-04-2016 LMES_RS09045 3c16e8b47a6cbeb500f3e6ca1bfc35a0 318 PANTHER PTHR34821 165 315 2.0E-41 T 22-04-2016 LMES_RS09045 3c16e8b47a6cbeb500f3e6ca1bfc35a0 318 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 142 2.0E-42 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ LMES_RS09045 3c16e8b47a6cbeb500f3e6ca1bfc35a0 318 Pfam PF04657 Putative inner membrane exporter, YdcZ 174 314 2.3E-42 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ LMES_RS06065 3bb5800c0a02d425c0d1c69f9056f411 187 SUPERFAMILY SSF53271 3 184 2.36E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS06065 3bb5800c0a02d425c0d1c69f9056f411 187 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 178 5.9E-53 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 LMES_RS06065 3bb5800c0a02d425c0d1c69f9056f411 187 PANTHER PTHR22573:SF56 1 177 3.6E-55 T 22-04-2016 LMES_RS06065 3bb5800c0a02d425c0d1c69f9056f411 187 PANTHER PTHR22573 1 177 3.6E-55 T 22-04-2016 LMES_RS06065 3bb5800c0a02d425c0d1c69f9056f411 187 Gene3D G3DSA:3.40.50.2020 5 179 7.8E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS06065 3bb5800c0a02d425c0d1c69f9056f411 187 Pfam PF00156 Phosphoribosyl transferase domain 21 165 7.2E-22 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS06550 ab13f64dd8d78d2bc6d37ec4891a8353 263 SUPERFAMILY SSF53474 3 252 8.39E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS06550 ab13f64dd8d78d2bc6d37ec4891a8353 263 PANTHER PTHR10907:SF33 4 262 1.3E-29 T 22-04-2016 LMES_RS06550 ab13f64dd8d78d2bc6d37ec4891a8353 263 Gene3D G3DSA:3.40.50.1820 4 252 7.5E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS06550 ab13f64dd8d78d2bc6d37ec4891a8353 263 PANTHER PTHR10907 4 262 1.3E-29 T 22-04-2016 LMES_RS06550 ab13f64dd8d78d2bc6d37ec4891a8353 263 Pfam PF00756 Putative esterase 10 247 2.4E-15 T 22-04-2016 IPR000801 Putative esterase LMES_RS05000 c199d28f8ddc6994a47021c9470dd116 135 PIRSF PIRSF033736 1 135 4.1E-40 T 22-04-2016 IPR017021 Uncharacterised conserved protein UCP033763 LMES_RS05000 c199d28f8ddc6994a47021c9470dd116 135 Gene3D G3DSA:3.40.1490.10 2 135 4.9E-35 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 LMES_RS05000 c199d28f8ddc6994a47021c9470dd116 135 SUPERFAMILY SSF102462 2 135 4.76E-42 T 22-04-2016 IPR023476 Peptidyl-tRNA hydrolase II domain MetaCyc: PWY-6308 LMES_RS05000 c199d28f8ddc6994a47021c9470dd116 135 Pfam PF09391 Protein of unknown function (DUF2000) 3 135 7.8E-47 T 22-04-2016 IPR018988 Protein of unknown function DUF2000 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PANTHER PTHR23501 6 464 8.1E-180 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PANTHER PTHR23501:SF82 6 464 8.1E-180 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 SUPERFAMILY SSF103473 6 196 1.1E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 SUPERFAMILY SSF103473 244 463 1.1E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 Gene3D G3DSA:1.20.1250.20 10 189 7.5E-29 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 Gene3D G3DSA:1.20.1250.20 261 460 2.0E-17 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 422 2.1E-105 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 Pfam PF07690 Major Facilitator Superfamily 14 405 6.4E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.9E-14 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.9E-14 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 334 354 1.9E-14 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.9E-14 T 22-04-2016 LMES_RS08365 1456427779b024ac8de478ec4f27c6cb 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 1.9E-14 T 22-04-2016 LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 16.821 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 Pfam PF00825 Ribonuclease P 1 106 2.6E-27 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 Gene3D G3DSA:3.30.230.10 1 114 4.2E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 PANTHER PTHR33992 1 115 1.1E-26 T 22-04-2016 LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 106 9.0E-22 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 109 2.2E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LMES_RS09370 963d5d102c2de568feecde44c51f6c53 116 SUPERFAMILY SSF54211 1 114 9.86E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 Gene3D G3DSA:2.60.120.10 14 147 2.3E-29 T 22-04-2016 IPR014710 RmlC-like jelly roll fold LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 SMART SM00419 169 218 6.8E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 Pfam PF00027 Cyclic nucleotide-binding domain 37 122 5.0E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 SUPERFAMILY SSF51206 11 149 1.83E-30 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 PANTHER PTHR24567 12 223 3.6E-34 T 22-04-2016 LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 PANTHER PTHR24567:SF30 12 223 3.6E-34 T 22-04-2016 LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 Pfam PF13545 Crp-like helix-turn-helix domain 156 216 1.6E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 SMART SM00100 17 138 1.4E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 Gene3D G3DSA:1.10.10.10 152 217 2.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09380 4190fbb7141bbf3a11d6d7a35552e88b 224 SUPERFAMILY SSF46785 152 220 2.53E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 SUPERFAMILY SSF54364 9 60 4.05E-16 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 Gene3D G3DSA:3.30.110.10 61 151 4.0E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 65 149 3.4E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 4 58 8.5E-18 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 PANTHER PTHR10938 5 153 2.9E-45 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 4 151 5.8E-54 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 Gene3D G3DSA:3.10.20.80 4 60 2.4E-20 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LMES_RS06345 d042d85f04c6bdad80345171e535f021 153 SUPERFAMILY SSF55200 64 151 1.96E-30 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 66 84 - T 22-04-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 Gene3D G3DSA:1.50.10.10 2 309 1.3E-74 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 SUPERFAMILY SSF48208 1 309 1.19E-69 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 PRINTS PR00735 Glycosyl hydrolase family 8 signature 66 84 4.5E-15 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 PRINTS PR00735 Glycosyl hydrolase family 8 signature 294 308 4.5E-15 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 PRINTS PR00735 Glycosyl hydrolase family 8 signature 203 212 4.5E-15 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 PRINTS PR00735 Glycosyl hydrolase family 8 signature 132 149 4.5E-15 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 PRINTS PR00735 Glycosyl hydrolase family 8 signature 173 184 4.5E-15 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06950 a88dbdc45ad0dffeda1144834276a135 312 Pfam PF01270 Glycosyl hydrolases family 8 2 305 2.6E-25 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 Pfam PF00709 Adenylosuccinate synthetase 4 419 1.6E-170 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 427 188.456 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 Gene3D G3DSA:3.90.170.10 264 422 7.3E-60 T 22-04-2016 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 SMART SM00788 3 421 8.2E-258 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 PANTHER PTHR11846 4 425 3.9E-223 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 130 141 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 Gene3D G3DSA:3.40.440.10 2 93 1.4E-69 T 22-04-2016 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 Gene3D G3DSA:3.40.440.10 194 263 1.4E-69 T 22-04-2016 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 SUPERFAMILY SSF52540 1 426 5.74E-166 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 Gene3D G3DSA:1.10.300.10 100 193 9.7E-35 T 22-04-2016 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LMES_RS06430 cf44f32df9e161481987009db7acf78f 427 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 7.6E-164 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LMES_RS08315 8b1cf1a8f8759700bf7b0dc1bfe472d0 479 PANTHER PTHR11785 8 479 3.3E-191 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08315 8b1cf1a8f8759700bf7b0dc1bfe472d0 479 ProSitePatterns PS00218 Amino acid permeases signature. 41 72 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LMES_RS08315 8b1cf1a8f8759700bf7b0dc1bfe472d0 479 PANTHER PTHR11785:SF204 8 479 3.3E-191 T 22-04-2016 LMES_RS08315 8b1cf1a8f8759700bf7b0dc1bfe472d0 479 PIRSF PIRSF006060 1 474 9.1E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08315 8b1cf1a8f8759700bf7b0dc1bfe472d0 479 Pfam PF00324 Amino acid permease 16 466 8.1E-134 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LMES_RS08010 cd8d75be77febecd9be4c486e4a26828 301 Gene3D G3DSA:2.10.270.10 73 137 1.8E-10 T 22-04-2016 LMES_RS08010 cd8d75be77febecd9be4c486e4a26828 301 SUPERFAMILY SSF69360 88 136 6.41E-11 T 22-04-2016 LMES_RS08010 cd8d75be77febecd9be4c486e4a26828 301 Pfam PF00877 NlpC/P60 family 171 274 3.0E-17 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS08010 cd8d75be77febecd9be4c486e4a26828 301 Gene3D G3DSA:3.90.1720.10 150 282 3.3E-24 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS08010 cd8d75be77febecd9be4c486e4a26828 301 SUPERFAMILY SSF54001 151 283 3.6E-21 T 22-04-2016 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 PANTHER PTHR21235:SF2 3 254 1.0E-113 T 22-04-2016 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 253 44.728 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 SUPERFAMILY SSF51366 3 253 2.12E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 Gene3D G3DSA:3.20.20.70 5 254 2.9E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 253 2.9E-102 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 Pfam PF00977 Histidine biosynthesis protein 6 236 4.9E-82 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 LMES_RS06905 52fe84c61eaf9dda63734d37a9ec2214 254 PANTHER PTHR21235 3 254 1.0E-113 T 22-04-2016 LMES_RS01185 f2b5fe2a7af7b10cf910f88302c8206b 325 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 9 321 2.2E-145 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LMES_RS01185 f2b5fe2a7af7b10cf910f88302c8206b 325 PANTHER PTHR23409 7 323 4.8E-75 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LMES_RS01185 f2b5fe2a7af7b10cf910f88302c8206b 325 SUPERFAMILY SSF47240 6 321 2.77E-93 T 22-04-2016 IPR009078 Ferritin-like superfamily LMES_RS01185 f2b5fe2a7af7b10cf910f88302c8206b 325 Pfam PF00268 Ribonucleotide reductase, small chain 12 282 1.8E-79 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LMES_RS01185 f2b5fe2a7af7b10cf910f88302c8206b 325 Gene3D G3DSA:1.10.620.20 4 285 4.1E-80 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 LMES_RS06850 fc6e1322b482d131177e06a30ce1e3aa 736 SUPERFAMILY SSF51998 125 690 8.55E-192 T 22-04-2016 LMES_RS06850 fc6e1322b482d131177e06a30ce1e3aa 736 ProSitePatterns PS00850 Glycine radical domain signature. 679 687 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LMES_RS06850 fc6e1322b482d131177e06a30ce1e3aa 736 PANTHER PTHR21075 5 714 6.0E-229 T 22-04-2016 LMES_RS06850 fc6e1322b482d131177e06a30ce1e3aa 736 Gene3D G3DSA:3.20.70.20 128 689 3.5E-179 T 22-04-2016 LMES_RS06850 fc6e1322b482d131177e06a30ce1e3aa 736 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 120 707 1.3E-174 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LMES_RS06850 fc6e1322b482d131177e06a30ce1e3aa 736 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 120 707 2.9E-176 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 SUPERFAMILY SSF55931 110 446 3.53E-119 T 22-04-2016 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 SMART SM01230 109 358 2.3E-131 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 PANTHER PTHR20852 9 448 3.3E-174 T 22-04-2016 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 Gene3D G3DSA:3.10.20.70 7 112 8.0E-39 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 445 6.3E-163 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 PANTHER PTHR20852:SF7 9 448 3.3E-174 T 22-04-2016 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 238 253 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 Pfam PF00120 Glutamine synthetase, catalytic domain 110 444 1.3E-129 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 Gene3D G3DSA:3.30.590.10 113 435 1.9E-122 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 SUPERFAMILY SSF54368 7 108 3.14E-31 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 102 8.9E-29 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03445 85059ea735af5770e3ab4979919d4280 448 ProSitePatterns PS00180 Glutamine synthetase signature 1. 54 72 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LMES_RS03040 390e6571eb3b2b4a5c04ba154cfbe4ea 217 PANTHER PTHR14969 34 202 1.5E-23 T 22-04-2016 LMES_RS03040 390e6571eb3b2b4a5c04ba154cfbe4ea 217 Gene3D G3DSA:1.20.144.10 32 198 5.5E-27 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS03040 390e6571eb3b2b4a5c04ba154cfbe4ea 217 Pfam PF01569 PAP2 superfamily 92 204 6.6E-18 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS03040 390e6571eb3b2b4a5c04ba154cfbe4ea 217 SMART SM00014 89 199 1.6E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS03040 390e6571eb3b2b4a5c04ba154cfbe4ea 217 SUPERFAMILY SSF48317 8 203 2.62E-32 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 163 3.6E-18 T 22-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 261 354 2.4E-17 T 22-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 384 1.2E-138 T 22-04-2016 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|UniPathway: UPA00058 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 PANTHER PTHR11877:SF26 3 352 4.9E-88 T 22-04-2016 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 PANTHER PTHR11877 3 352 4.9E-88 T 22-04-2016 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 SUPERFAMILY SSF53901 169 384 5.76E-57 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 SUPERFAMILY SSF53901 3 166 3.31E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS05200 3c1c7114ebfaa2b6ab5d19c45e9a1854 385 Gene3D G3DSA:3.40.47.10 1 248 6.4E-83 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LMES_RS09260 b32791d7015ef5cc6d859cecf1aa43ba 320 PANTHER PTHR10361 7 313 1.5E-78 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 LMES_RS09260 b32791d7015ef5cc6d859cecf1aa43ba 320 Pfam PF01758 Sodium Bile acid symporter family 49 226 8.6E-39 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 LMES_RS08950 3287c2be5b402ef4f5e58120021e362f 183 PANTHER PTHR10245:SF47 7 95 2.3E-15 T 22-04-2016 LMES_RS08950 3287c2be5b402ef4f5e58120021e362f 183 PANTHER PTHR10245 7 95 2.3E-15 T 22-04-2016 LMES_RS08950 3287c2be5b402ef4f5e58120021e362f 183 Pfam PF01381 Helix-turn-helix 7 61 9.4E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08950 3287c2be5b402ef4f5e58120021e362f 183 Gene3D G3DSA:1.10.260.40 3 64 1.5E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08950 3287c2be5b402ef4f5e58120021e362f 183 SMART SM00530 6 61 1.0E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08950 3287c2be5b402ef4f5e58120021e362f 183 SUPERFAMILY SSF47413 2 67 1.71E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS05495 2013863b9d1834740fa1318d39e24e2d 280 PANTHER PTHR32502 5 274 2.7E-42 T 22-04-2016 LMES_RS05495 2013863b9d1834740fa1318d39e24e2d 280 PANTHER PTHR32502:SF5 5 274 2.7E-42 T 22-04-2016 LMES_RS05495 2013863b9d1834740fa1318d39e24e2d 280 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 8 274 4.3E-90 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 LMES_RS05115 5fe0f7e09d6f64d62f3e7b1e8e6b23ca 330 Pfam PF00793 DAHP synthetase I family 78 329 3.0E-68 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LMES_RS05115 5fe0f7e09d6f64d62f3e7b1e8e6b23ca 330 SUPERFAMILY SSF51569 52 329 7.42E-94 T 22-04-2016 LMES_RS05115 5fe0f7e09d6f64d62f3e7b1e8e6b23ca 330 PANTHER PTHR21057 2 329 5.5E-124 T 22-04-2016 LMES_RS05115 5fe0f7e09d6f64d62f3e7b1e8e6b23ca 330 PANTHER PTHR21057:SF4 2 329 5.5E-124 T 22-04-2016 LMES_RS05115 5fe0f7e09d6f64d62f3e7b1e8e6b23ca 330 Gene3D G3DSA:3.20.20.70 68 330 8.5E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05115 5fe0f7e09d6f64d62f3e7b1e8e6b23ca 330 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 67 323 1.8E-108 T 22-04-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 PANTHER PTHR33434 1 286 1.5E-60 T 22-04-2016 LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 PANTHER PTHR33434:SF2 1 286 1.5E-60 T 22-04-2016 LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 Gene3D G3DSA:3.40.50.10170 3 154 6.7E-38 T 22-04-2016 LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 286 3.0E-70 T 22-04-2016 IPR003797 DegV LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 285 1.1E-77 T 22-04-2016 IPR003797 DegV LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 SUPERFAMILY SSF82549 1 287 1.28E-74 T 22-04-2016 LMES_RS00560 54674adcd2f9e62d3b7d6f4bfbb9cac2 293 Gene3D G3DSA:3.30.1180.10 157 288 1.8E-32 T 22-04-2016 LMES_RS00330 c6e283da847409386bc005710d241234 240 PANTHER PTHR10245 1 62 2.9E-15 T 22-04-2016 LMES_RS00330 c6e283da847409386bc005710d241234 240 SUPERFAMILY SSF47413 1 65 6.17E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00330 c6e283da847409386bc005710d241234 240 Pfam PF01381 Helix-turn-helix 7 61 8.4E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00330 c6e283da847409386bc005710d241234 240 SMART SM00530 6 61 3.4E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS00330 c6e283da847409386bc005710d241234 240 PANTHER PTHR10245:SF47 1 62 2.9E-15 T 22-04-2016 LMES_RS00330 c6e283da847409386bc005710d241234 240 Gene3D G3DSA:1.10.260.40 1 62 4.6E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS00330 c6e283da847409386bc005710d241234 240 Gene3D G3DSA:1.10.357.10 95 238 8.8E-4 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 Pfam PF00072 Response regulator receiver domain 4 113 5.4E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 SUPERFAMILY SSF52172 2 125 6.83E-43 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 2.0E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 SUPERFAMILY SSF46894 133 231 9.87E-32 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 Gene3D G3DSA:3.40.50.2300 2 126 5.2E-43 T 22-04-2016 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 SMART SM00862 154 230 5.6E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 PANTHER PTHR26402 2 231 3.8E-99 T 22-04-2016 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 PANTHER PTHR26402:SF614 2 231 3.8E-99 T 22-04-2016 LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 Gene3D G3DSA:1.10.10.10 132 232 3.6E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08810 ab6885be58e18a065a1e8cd7e8cdad35 235 SMART SM00448 2 112 1.1E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS04170 d81bbdfb95e52b10cfcc79c82fd45024 214 Pfam PF07077 Protein of unknown function (DUF1345) 37 201 2.5E-42 T 22-04-2016 IPR009781 Protein of unknown function DUF1345 LMES_RS08110 1171ade31995a121e82f346df3666c10 108 PANTHER PTHR10438:SF301 8 88 3.0E-16 T 22-04-2016 LMES_RS08110 1171ade31995a121e82f346df3666c10 108 PANTHER PTHR10438 8 88 3.0E-16 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LMES_RS08110 1171ade31995a121e82f346df3666c10 108 SUPERFAMILY SSF52833 5 106 1.78E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS08110 1171ade31995a121e82f346df3666c10 108 Pfam PF00085 Thioredoxin 8 100 9.4E-17 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 LMES_RS08110 1171ade31995a121e82f346df3666c10 108 Gene3D G3DSA:3.40.30.10 8 103 6.2E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 SUPERFAMILY SSF51735 103 289 9.01E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 Gene3D G3DSA:3.40.50.720 107 290 8.3E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 PANTHER PTHR10996 1 313 1.5E-97 T 22-04-2016 LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 288 1.3E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 Gene3D G3DSA:3.40.50.720 1 106 2.1E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 SUPERFAMILY SSF52283 1 134 3.4E-29 T 22-04-2016 LMES_RS04690 84399e85e433dc533b6ef4063272b0bc 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 314 5.6E-26 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS01555 f831919509efe5570c1aebab87ce5c59 386 PANTHER PTHR33392 233 351 5.6E-70 T 22-04-2016 LMES_RS01555 f831919509efe5570c1aebab87ce5c59 386 PANTHER PTHR33392 34 214 5.6E-70 T 22-04-2016 LMES_RS01555 f831919509efe5570c1aebab87ce5c59 386 PANTHER PTHR33392:SF5 233 351 5.6E-70 T 22-04-2016 LMES_RS01555 f831919509efe5570c1aebab87ce5c59 386 PANTHER PTHR33392:SF5 34 214 5.6E-70 T 22-04-2016 LMES_RS01555 f831919509efe5570c1aebab87ce5c59 386 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 106 272 4.5E-41 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS01555 f831919509efe5570c1aebab87ce5c59 386 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 105 271 5.5E-34 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 SMART SM00322 61 133 1.1E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 PANTHER PTHR11760:SF19 2 223 2.6E-117 T 22-04-2016 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 SUPERFAMILY SSF54821 115 214 3.53E-35 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 218 3.0E-86 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 PANTHER PTHR11760 2 223 2.6E-117 T 22-04-2016 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 Gene3D G3DSA:3.30.300.20 17 115 2.0E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 Pfam PF07650 KH domain 39 118 8.3E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 Pfam PF00189 Ribosomal protein S3, C-terminal domain 128 210 3.2E-35 T 22-04-2016 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 214 37.187 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 Gene3D G3DSA:3.30.1140.32 116 215 7.8E-40 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 ProSitePatterns PS00548 Ribosomal protein S3 signature. 171 205 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site LMES_RS00930 3bb40e19a94b3ef2fa340e65629e1217 223 SUPERFAMILY SSF54814 2 114 1.33E-33 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 291 27.312 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 Gene3D G3DSA:1.10.287.890 190 270 8.9E-27 T 22-04-2016 LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 SUPERFAMILY SSF52540 140 217 2.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 SUPERFAMILY SSF52540 2 44 2.8E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 Pfam PF01715 IPP transferase 37 270 3.4E-71 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 SUPERFAMILY SSF52540 4 142 3.86E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 PANTHER PTHR11088 3 274 5.8E-90 T 22-04-2016 LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 278 3.6E-76 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LMES_RS07575 0bedbaf21524946f81cb32a40f48a725 297 Gene3D G3DSA:3.40.50.300 1 165 2.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS05655 a1a3282c86b146ea467b897fa10fd89d 148 PANTHER PTHR28055:SF1 1 148 3.3E-48 T 22-04-2016 LMES_RS05655 a1a3282c86b146ea467b897fa10fd89d 148 Gene3D G3DSA:1.10.1510.10 1 90 6.7E-30 T 22-04-2016 LMES_RS05655 a1a3282c86b146ea467b897fa10fd89d 148 Pfam PF09424 Yqey-like protein 5 146 1.5E-51 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial LMES_RS05655 a1a3282c86b146ea467b897fa10fd89d 148 SUPERFAMILY SSF89095 1 146 1.2E-39 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 LMES_RS05655 a1a3282c86b146ea467b897fa10fd89d 148 Gene3D G3DSA:1.10.10.410 91 147 2.7E-22 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal LMES_RS05655 a1a3282c86b146ea467b897fa10fd89d 148 PANTHER PTHR28055 1 148 3.3E-48 T 22-04-2016 LMES_RS02440 171996839972da6befba48bcad19b617 240 SMART SM00345 8 67 1.4E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02440 171996839972da6befba48bcad19b617 240 SUPERFAMILY SSF64288 55 237 1.22E-34 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LMES_RS02440 171996839972da6befba48bcad19b617 240 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 237 5.7E-77 T 22-04-2016 IPR012770 Trehalose operon transcriptional repressor LMES_RS02440 171996839972da6befba48bcad19b617 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.2E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02440 171996839972da6befba48bcad19b617 240 PANTHER PTHR11751 1 69 3.8E-25 T 22-04-2016 LMES_RS02440 171996839972da6befba48bcad19b617 240 PANTHER PTHR11751 117 141 3.8E-25 T 22-04-2016 LMES_RS02440 171996839972da6befba48bcad19b617 240 Gene3D G3DSA:3.40.1410.10 63 238 8.8E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LMES_RS02440 171996839972da6befba48bcad19b617 240 SMART SM00866 89 230 2.8E-22 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LMES_RS02440 171996839972da6befba48bcad19b617 240 Pfam PF07702 UTRA domain 90 230 7.0E-25 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LMES_RS02440 171996839972da6befba48bcad19b617 240 Gene3D G3DSA:1.10.10.10 3 62 1.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02440 171996839972da6befba48bcad19b617 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.1E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02440 171996839972da6befba48bcad19b617 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.1E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02440 171996839972da6befba48bcad19b617 240 SUPERFAMILY SSF46785 2 71 8.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02440 171996839972da6befba48bcad19b617 240 PANTHER PTHR11751:SF347 1 69 3.8E-25 T 22-04-2016 LMES_RS02440 171996839972da6befba48bcad19b617 240 PANTHER PTHR11751:SF347 117 141 3.8E-25 T 22-04-2016 LMES_RS06320 527b58befa97cc2b3157c381665fa2c9 320 PANTHER PTHR33392:SF5 8 293 4.7E-74 T 22-04-2016 LMES_RS06320 527b58befa97cc2b3157c381665fa2c9 320 PANTHER PTHR33392 8 293 4.7E-74 T 22-04-2016 LMES_RS06320 527b58befa97cc2b3157c381665fa2c9 320 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 86 238 5.0E-40 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS06320 527b58befa97cc2b3157c381665fa2c9 320 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 87 239 6.4E-42 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 164 1.7E-66 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 SUPERFAMILY SSF54211 82 160 1.64E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 Gene3D G3DSA:3.30.230.10 79 160 5.4E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 34.222 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 77 4.3E-31 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 SUPERFAMILY SSF54768 10 77 6.7E-24 T 22-04-2016 LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 159 4.1E-28 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 PANTHER PTHR13718 10 164 1.5E-70 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 LMES_RS00980 2a02d6da9ce69aab9451f1bc9ca57166 168 Gene3D G3DSA:3.30.160.20 11 74 1.6E-32 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain LMES_RS05065 3d1a5d3193a5d63bcde12b7c431ea381 215 Pfam PF00899 ThiF family 26 154 5.2E-32 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LMES_RS05065 3d1a5d3193a5d63bcde12b7c431ea381 215 SUPERFAMILY SSF69572 28 212 1.7E-44 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LMES_RS05065 3d1a5d3193a5d63bcde12b7c431ea381 215 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 14 209 1.4E-67 T 22-04-2016 IPR012729 Thiamine biosynthesis protein ThiF LMES_RS05065 3d1a5d3193a5d63bcde12b7c431ea381 215 Gene3D G3DSA:3.40.50.720 19 212 1.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05065 3d1a5d3193a5d63bcde12b7c431ea381 215 PANTHER PTHR10953 18 130 5.0E-31 T 22-04-2016 LMES_RS04175 ee4c46bec5daacacb13edbbc7614d3a8 82 Pfam PF04226 Transglycosylase associated protein 33 77 1.0E-11 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 LMES_RS07365 5d2b8856d2d1869d4e345219de55ba48 387 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 376 1.7E-57 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 LMES_RS07365 5d2b8856d2d1869d4e345219de55ba48 387 Pfam PF05065 Phage capsid family 118 350 1.7E-19 T 22-04-2016 IPR024455 Phage capsid LMES_RS07365 5d2b8856d2d1869d4e345219de55ba48 387 SUPERFAMILY SSF56563 110 379 2.48E-37 T 22-04-2016 LMES_RS08385 fcecd18e2197cf3023d9429d8bc5c4f8 212 SUPERFAMILY SSF54106 31 73 2.75E-10 T 22-04-2016 IPR018392 LysM domain LMES_RS08385 fcecd18e2197cf3023d9429d8bc5c4f8 212 SMART SM00257 31 75 6.0E-10 T 22-04-2016 IPR018392 LysM domain LMES_RS08385 fcecd18e2197cf3023d9429d8bc5c4f8 212 Pfam PF01476 LysM domain 32 72 6.1E-11 T 22-04-2016 IPR018392 LysM domain LMES_RS08385 fcecd18e2197cf3023d9429d8bc5c4f8 212 Gene3D G3DSA:3.10.350.10 31 72 1.7E-14 T 22-04-2016 IPR018392 LysM domain LMES_RS08385 fcecd18e2197cf3023d9429d8bc5c4f8 212 Gene3D G3DSA:1.10.530.10 116 179 3.4E-5 T 22-04-2016 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 PANTHER PTHR18968 1 591 5.5E-236 T 22-04-2016 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 174 3.3E-37 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 541 3.1E-32 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 Gene3D G3DSA:3.40.50.970 363 551 1.0E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 SUPERFAMILY SSF52467 196 364 9.16E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 Gene3D G3DSA:3.40.50.970 3 178 9.0E-47 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 332 2.2E-27 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 Gene3D G3DSA:3.40.50.1220 197 357 4.8E-39 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 PANTHER PTHR18968:SF124 1 591 5.5E-236 T 22-04-2016 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 SUPERFAMILY SSF52518 370 590 3.93E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 SUPERFAMILY SSF52518 3 181 1.14E-38 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold LMES_RS04765 bfc5d98cebfa0ed69b739f12b86cb285 606 TIGRFAM TIGR02720 pyruv_oxi_spxB: pyruvate oxidase 8 587 9.8E-253 T 22-04-2016 IPR014092 Pyruvate oxidase GO:0047112|GO:0055114 KEGG: 00620+1.2.3.3 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 Gene3D G3DSA:3.20.20.70 2 308 5.0E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 PANTHER PTHR11938:SF106 1 312 1.2E-131 T 22-04-2016 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 245 265 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 SUPERFAMILY SSF51395 1 307 1.32E-65 T 22-04-2016 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 PANTHER PTHR11938 1 312 1.2E-131 T 22-04-2016 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 Pfam PF01180 Dihydroorotate dehydrogenase 3 293 2.1E-72 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 3 306 3.7E-45 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LMES_RS05535 850224430b777d26a8fddfd088b84abf 312 PIRSF PIRSF000164 1 309 8.9E-66 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 3.4E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 SUPERFAMILY SSF52283 2 135 1.17E-31 T 22-04-2016 LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 PANTHER PTHR10996:SF161 1 329 4.6E-80 T 22-04-2016 LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 PANTHER PTHR10996 1 329 4.6E-80 T 22-04-2016 LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 SUPERFAMILY SSF51735 102 298 2.47E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 3.3E-44 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 Gene3D G3DSA:3.40.50.720 116 299 2.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS09265 a6a4db60dd4f233e2760022ff1b08145 329 Gene3D G3DSA:3.40.50.720 1 115 3.0E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03930 a0f381fd0fd1afb07c7676cb43a1af52 125 SUPERFAMILY SSF50729 6 125 1.97E-36 T 22-04-2016 IPR011993 PH domain-like LMES_RS03930 a0f381fd0fd1afb07c7676cb43a1af52 125 Pfam PF08000 Bacterial PH domain 3 123 1.6E-43 T 22-04-2016 IPR012544 Bacterial Pleckstrin homology domain LMES_RS03930 a0f381fd0fd1afb07c7676cb43a1af52 125 Gene3D G3DSA:2.30.29.50 5 102 9.0E-38 T 22-04-2016 IPR012544 Bacterial Pleckstrin homology domain LMES_RS03930 a0f381fd0fd1afb07c7676cb43a1af52 125 PANTHER PTHR35796 1 122 1.1E-37 T 22-04-2016 LMES_RS09415 a2a12185b552432d29565c49cf1b923d 207 SMART SM01057 4 202 6.4E-30 T 22-04-2016 IPR001148 Alpha carbonic anhydrase LMES_RS09415 a2a12185b552432d29565c49cf1b923d 207 Pfam PF00194 Eukaryotic-type carbonic anhydrase 6 200 5.3E-24 T 22-04-2016 IPR001148 Alpha carbonic anhydrase LMES_RS09415 a2a12185b552432d29565c49cf1b923d 207 PANTHER PTHR18952:SF86 7 203 1.7E-26 T 22-04-2016 LMES_RS09415 a2a12185b552432d29565c49cf1b923d 207 PANTHER PTHR18952 7 203 1.7E-26 T 22-04-2016 IPR023561 Carbonic anhydrase, alpha-class LMES_RS09415 a2a12185b552432d29565c49cf1b923d 207 Gene3D G3DSA:3.10.200.10 8 200 1.1E-36 T 22-04-2016 IPR001148 Alpha carbonic anhydrase LMES_RS09415 a2a12185b552432d29565c49cf1b923d 207 SUPERFAMILY SSF51069 7 200 2.88E-42 T 22-04-2016 IPR001148 Alpha carbonic anhydrase LMES_RS05285 478bb98b21fc87665718c26aa538d997 254 PANTHER PTHR18895 9 244 2.4E-82 T 22-04-2016 LMES_RS05285 478bb98b21fc87665718c26aa538d997 254 SUPERFAMILY SSF53335 18 200 1.22E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS05285 478bb98b21fc87665718c26aa538d997 254 Pfam PF05175 Methyltransferase small domain 20 165 2.3E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LMES_RS05285 478bb98b21fc87665718c26aa538d997 254 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 122 128 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LMES_RS05285 478bb98b21fc87665718c26aa538d997 254 PANTHER PTHR18895:SF75 9 244 2.4E-82 T 22-04-2016 LMES_RS05285 478bb98b21fc87665718c26aa538d997 254 Gene3D G3DSA:3.40.50.150 34 248 5.6E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS02740 1a935f6109e314ecf73aaa8f583178a7 230 Gene3D G3DSA:3.10.20.320 3 77 2.8E-6 T 22-04-2016 IPR009459 MucBP domain LMES_RS02740 1a935f6109e314ecf73aaa8f583178a7 230 Pfam PF06458 MucBP domain 6 69 3.4E-6 T 22-04-2016 IPR009459 MucBP domain LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 7.8E-9 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Gene3D G3DSA:3.30.930.10 77 268 3.1E-40 T 22-04-2016 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 316 1.7E-35 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 PANTHER PTHR12835 17 316 2.8E-40 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 SUPERFAMILY SSF50037 274 316 5.49E-5 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 212 6.2E-5 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Gene3D G3DSA:2.30.30.100 272 315 1.8E-8 T 22-04-2016 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 SUPERFAMILY SSF55681 75 265 1.08E-37 T 22-04-2016 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Pfam PF08279 HTH domain 5 58 1.2E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 318 28.093 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 SUPERFAMILY SSF46785 7 60 6.4E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02475 e9086a43234b81ad2807e378cd19a77d 325 Gene3D G3DSA:1.10.10.10 1 61 8.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02860 9a833135760c6b9504d579ad9a4ae475 118 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 5.7E-30 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV LMES_RS02860 9a833135760c6b9504d579ad9a4ae475 118 PANTHER PTHR37309 1 118 2.1E-28 T 22-04-2016 LMES_RS02860 9a833135760c6b9504d579ad9a4ae475 118 PANTHER PTHR37309:SF1 1 118 2.1E-28 T 22-04-2016 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 SUPERFAMILY SSF53244 298 433 1.83E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 PANTHER PTHR23135 1 430 1.7E-134 T 22-04-2016 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Pfam PF08245 Mur ligase middle domain 109 278 2.6E-24 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 SUPERFAMILY SSF53623 95 296 1.83E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Gene3D G3DSA:3.40.1190.10 93 300 3.1E-58 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 438 32.878 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Gene3D G3DSA:3.90.190.20 301 430 3.0E-39 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 381 6.5E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 SUPERFAMILY SSF51984 3 91 1.06E-16 T 22-04-2016 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Pfam PF01225 Mur ligase family, catalytic domain 5 103 8.7E-17 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 Gene3D G3DSA:3.40.50.720 3 92 5.5E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 426 1.0E-119 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS03405 021f78fa449864b00ae256d3d9ef9b94 444 PANTHER PTHR23135:SF5 1 430 1.7E-134 T 22-04-2016 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 Pfam PF00480 ROK family 7 318 3.3E-73 T 22-04-2016 IPR000600 ROK family LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 PANTHER PTHR18964 1 318 3.4E-95 T 22-04-2016 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 Gene3D G3DSA:3.30.420.40 146 302 8.8E-56 T 22-04-2016 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 PANTHER PTHR18964:SF123 1 318 3.4E-95 T 22-04-2016 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 SUPERFAMILY SSF53067 5 319 6.64E-67 T 22-04-2016 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 Gene3D G3DSA:3.30.420.40 3 145 3.3E-44 T 22-04-2016 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 318 9.8E-98 T 22-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LMES_RS03245 01f9bcf13cea90c35a62a936a732165e 321 ProSitePatterns PS01125 ROK family signature. 140 167 - T 22-04-2016 IPR000600 ROK family LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 PANTHER PTHR33705:SF2 1 82 1.2E-32 T 22-04-2016 LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 SUPERFAMILY SSF55594 4 84 1.15E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 PANTHER PTHR33705 1 82 1.2E-32 T 22-04-2016 LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 PRINTS PR00107 Phosphocarrier protein signature 39 54 1.7E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 PRINTS PR00107 Phosphocarrier protein signature 54 71 1.7E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.7E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 1.3E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 Gene3D G3DSA:3.30.1340.10 4 84 4.3E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS07980 42515ad58199b505497a6a19f1a5ed02 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 82 3.0E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 PANTHER PTHR23135:SF7 33 231 1.2E-106 T 22-04-2016 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 PANTHER PTHR23135:SF7 261 443 1.2E-106 T 22-04-2016 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 Gene3D G3DSA:3.40.1190.10 40 194 1.1E-40 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 Gene3D G3DSA:3.40.1190.10 245 305 1.1E-40 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 Pfam PF08353 Domain of unknown function (DUF1727) 327 435 5.8E-33 T 22-04-2016 IPR013564 Domain of unknown function DUF1727 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 PANTHER PTHR23135 33 231 1.2E-106 T 22-04-2016 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 PANTHER PTHR23135 261 443 1.2E-106 T 22-04-2016 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 SUPERFAMILY SSF53623 40 198 1.03E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 SUPERFAMILY SSF53623 247 304 1.03E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS08020 4e554bf6ca84bed6c124e302c1e548d0 452 Pfam PF08245 Mur ligase middle domain 55 288 1.2E-10 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Pfam PF01493 GXGXG motif 1230 1415 2.7E-66 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Pfam PF04898 Glutamate synthase central domain 458 733 9.9E-94 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Gene3D G3DSA:3.20.20.70 810 1194 2.4E-163 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Pfam PF01645 Conserved region in glutamate synthase 793 1157 1.3E-145 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Pfam PF00310 Glutamine amidotransferases class-II 26 427 5.7E-152 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Gene3D G3DSA:3.20.20.70 439 780 3.7E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 SUPERFAMILY SSF56235 26 430 1.54E-136 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 PANTHER PTHR11938:SF1 16 1467 0.0 T 22-04-2016 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 SUPERFAMILY SSF69336 1214 1465 3.27E-77 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Gene3D G3DSA:2.160.20.60 1211 1472 1.7E-86 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 PANTHER PTHR11938 16 1467 0.0 T 22-04-2016 LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 Gene3D G3DSA:3.60.20.10 26 437 1.9E-153 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LMES_RS03935 9a11c7f64c6b822078b6b5f2d7b25dc7 1506 SUPERFAMILY SSF51395 439 1186 1.14E-230 T 22-04-2016 LMES_RS04050 b728b86976d9a1c8ba2b47a8d288c158 181 PANTHER PTHR13256 19 181 4.5E-34 T 22-04-2016 LMES_RS04050 b728b86976d9a1c8ba2b47a8d288c158 181 SUPERFAMILY SSF55729 11 177 3.72E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04050 b728b86976d9a1c8ba2b47a8d288c158 181 Pfam PF13302 Acetyltransferase (GNAT) domain 19 152 4.9E-23 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS04050 b728b86976d9a1c8ba2b47a8d288c158 181 Gene3D G3DSA:3.40.630.30 12 178 3.2E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS08570 134b84177580608d4cce0bcc18f61710 389 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 39 374 6.0E-90 T 22-04-2016 IPR018647 Domain of unknown function DUF2075 LMES_RS08570 134b84177580608d4cce0bcc18f61710 389 Gene3D G3DSA:3.40.50.300 18 153 6.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08570 134b84177580608d4cce0bcc18f61710 389 Gene3D G3DSA:3.40.50.300 363 379 6.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08570 134b84177580608d4cce0bcc18f61710 389 SUPERFAMILY SSF52540 2 160 3.58E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 Gene3D G3DSA:3.90.190.20 310 441 7.2E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 Gene3D G3DSA:3.40.1190.10 101 308 2.0E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 Gene3D G3DSA:3.40.50.720 5 98 4.5E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 SUPERFAMILY SSF53244 308 444 8.01E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 PANTHER PTHR23135:SF2 1 439 3.7E-136 T 22-04-2016 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 446 32.499 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 441 4.0E-124 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 PANTHER PTHR23135 1 439 3.7E-136 T 22-04-2016 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 SUPERFAMILY SSF53623 103 306 1.16E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 SUPERFAMILY SSF51984 9 99 1.07E-11 T 22-04-2016 LMES_RS06615 4ac29d14d3c1f18161c81cd9f5e542dc 449 Pfam PF08245 Mur ligase middle domain 116 289 1.9E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS08050 4ddf67835c3ef019848945cd415692aa 470 Pfam PF00324 Amino acid permease 15 454 1.9E-100 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LMES_RS08050 4ddf67835c3ef019848945cd415692aa 470 PANTHER PTHR11785:SF399 3 449 5.7E-197 T 22-04-2016 LMES_RS08050 4ddf67835c3ef019848945cd415692aa 470 ProSitePatterns PS00218 Amino acid permeases signature. 39 70 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LMES_RS08050 4ddf67835c3ef019848945cd415692aa 470 PANTHER PTHR11785 3 449 5.7E-197 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS08050 4ddf67835c3ef019848945cd415692aa 470 PIRSF PIRSF006060 1 466 7.7E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LMES_RS02270 c27b6801d138fac9599261f2365e274a 383 SUPERFAMILY SSF52540 6 159 1.14E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02270 c27b6801d138fac9599261f2365e274a 383 SMART SM00382 18 186 0.0016 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02270 c27b6801d138fac9599261f2365e274a 383 Gene3D G3DSA:3.40.50.300 18 35 9.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02270 c27b6801d138fac9599261f2365e274a 383 Gene3D G3DSA:3.40.50.300 280 301 9.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02270 c27b6801d138fac9599261f2365e274a 383 Pfam PF07728 AAA domain (dynein-related subfamily) 24 181 1.0E-6 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 LMES_RS02270 c27b6801d138fac9599261f2365e274a 383 Gene3D G3DSA:3.40.50.300 36 156 9.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07260 b346dbb14bf2e6b133fbefb287ee4887 183 PANTHER PTHR31223 2 182 4.7E-62 T 22-04-2016 LMES_RS07260 b346dbb14bf2e6b133fbefb287ee4887 183 SUPERFAMILY SSF102405 3 181 4.88E-52 T 22-04-2016 LMES_RS07260 b346dbb14bf2e6b133fbefb287ee4887 183 Gene3D G3DSA:3.40.50.450 2 180 1.1E-57 T 22-04-2016 LMES_RS07260 b346dbb14bf2e6b133fbefb287ee4887 183 Pfam PF03641 Possible lysine decarboxylase 48 177 3.3E-35 T 22-04-2016 IPR031100 LOG family LMES_RS07260 b346dbb14bf2e6b133fbefb287ee4887 183 PANTHER PTHR31223:SF0 2 182 4.7E-62 T 22-04-2016 LMES_RS07260 b346dbb14bf2e6b133fbefb287ee4887 183 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 5 179 8.8E-53 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG LMES_RS05565 143e708c7a123dc4723f9f2aa845452a 158 SUPERFAMILY SSF81330 29 115 1.11E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS05565 143e708c7a123dc4723f9f2aa845452a 158 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 17 138 7.7E-13 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 Gene3D G3DSA:3.40.50.1100 203 434 1.4E-84 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 409 3.7E-13 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 Pfam PF14821 Threonine synthase N terminus 2 78 2.3E-23 T 22-04-2016 IPR029144 Threonine synthase, N-terminal LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 TIGRFAM TIGR00260 thrC: threonine synthase 93 433 1.7E-70 T 22-04-2016 IPR004450 Threonine synthase-like LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 100 114 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 PANTHER PTHR10314:SF1 371 472 5.8E-111 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 PANTHER PTHR10314:SF1 52 341 5.8E-111 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 PANTHER PTHR10314:SF1 25 36 5.8E-111 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 PANTHER PTHR10314 371 472 5.8E-111 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 PANTHER PTHR10314 52 341 5.8E-111 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 PANTHER PTHR10314 25 36 5.8E-111 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 Gene3D G3DSA:3.90.1380.10 1 82 2.4E-28 T 22-04-2016 IPR029144 Threonine synthase, N-terminal LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 Gene3D G3DSA:3.40.50.1100 123 202 1.3E-9 T 22-04-2016 LMES_RS03785 6b95eb937413d459a90e856b8f401787 485 SUPERFAMILY SSF53686 1 479 6.04E-138 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 17.71 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 Pfam PF00831 Ribosomal L29 protein 5 59 3.1E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 Gene3D G3DSA:1.10.287.310 3 64 2.4E-28 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 PANTHER PTHR10916 3 65 1.6E-22 T 22-04-2016 LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 60 2.4E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 SUPERFAMILY SSF46561 2 64 1.22E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00940 a674c9371e4c44d8661f8fc0a4cc71bc 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS08255 28336aebb5c81329c9b5da581769cd36 352 PANTHER PTHR41320 4 352 6.8E-54 T 22-04-2016 LMES_RS08255 28336aebb5c81329c9b5da581769cd36 352 Pfam PF13303 Phosphotransferase system, EIIC 17 349 6.0E-77 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Pfam PF01926 50S ribosome-binding GTPase 5 123 9.6E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 SUPERFAMILY SSF52540 3 303 1.27E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 43.51 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Gene3D G3DSA:1.10.150.300 131 200 6.5E-30 T 22-04-2016 IPR023192 TGS-like domain LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 4.4E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PANTHER PTHR23305:SF12 1 366 1.4E-192 T 22-04-2016 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 8.8E-151 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.1E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.1E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.1E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.1E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PIRSF PIRSF006641 1 366 1.5E-153 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Gene3D G3DSA:3.10.20.30 271 366 8.1E-48 T 22-04-2016 IPR012675 Beta-grasp domain LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 SUPERFAMILY SSF81271 282 363 4.36E-34 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 PANTHER PTHR23305 1 366 1.4E-192 T 22-04-2016 LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Gene3D G3DSA:3.40.50.300 4 130 3.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01640 728d2d1ec1b2810a6b85d12368c9575c 366 Gene3D G3DSA:3.40.50.300 201 270 3.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06715 8521b2a50d06820bfc6add4478605164 184 SUPERFAMILY SSF55729 2 170 9.28E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS06715 8521b2a50d06820bfc6add4478605164 184 Gene3D G3DSA:3.40.630.30 2 174 1.1E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS06715 8521b2a50d06820bfc6add4478605164 184 Pfam PF13302 Acetyltransferase (GNAT) domain 3 145 3.6E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS06715 8521b2a50d06820bfc6add4478605164 184 PANTHER PTHR13256:SF48 2 172 1.1E-47 T 22-04-2016 LMES_RS06715 8521b2a50d06820bfc6add4478605164 184 PANTHER PTHR13256 2 172 1.1E-47 T 22-04-2016 LMES_RS07845 22d6da7e8884f514e1d45345d494459b 73 Gene3D G3DSA:1.10.260.40 3 64 7.7E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS07845 22d6da7e8884f514e1d45345d494459b 73 SMART SM00530 8 62 2.1E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS07845 22d6da7e8884f514e1d45345d494459b 73 Pfam PF01381 Helix-turn-helix 9 61 3.3E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS07845 22d6da7e8884f514e1d45345d494459b 73 SUPERFAMILY SSF47413 4 64 1.47E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS02655 3c0f288736e6f66af82b4334a596e5d5 460 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 458 6.8E-135 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LMES_RS02655 3c0f288736e6f66af82b4334a596e5d5 460 Pfam PF02447 GntP family permease 1 456 5.3E-130 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LMES_RS02655 3c0f288736e6f66af82b4334a596e5d5 460 PANTHER PTHR30354 1 455 3.6E-154 T 22-04-2016 LMES_RS02655 3c0f288736e6f66af82b4334a596e5d5 460 PIRSF PIRSF002746 1 460 2.9E-141 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LMES_RS02655 3c0f288736e6f66af82b4334a596e5d5 460 PANTHER PTHR30354:SF1 1 455 3.6E-154 T 22-04-2016 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 Gene3D G3DSA:1.10.3080.10 11 421 1.4E-57 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 PANTHER PTHR11689 28 420 4.6E-20 T 22-04-2016 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 PANTHER PTHR11689:SF14 28 420 4.6E-20 T 22-04-2016 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 PRINTS PR00762 Chloride channel signature 116 135 4.7E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 PRINTS PR00762 Chloride channel signature 336 356 4.7E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 PRINTS PR00762 Chloride channel signature 369 385 4.7E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 PRINTS PR00762 Chloride channel signature 173 192 4.7E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 SUPERFAMILY SSF81340 17 422 9.16E-73 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 LMES_RS03845 aa2cc8997b008889c738c3d623aa12db 427 Pfam PF00654 Voltage gated chloride channel 77 420 1.6E-60 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 Gene3D G3DSA:3.90.400.10 102 169 7.8E-25 T 22-04-2016 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 SMART SM00642 11 414 1.9E-116 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 Pfam PF00128 Alpha amylase, catalytic domain 26 371 2.1E-104 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 PANTHER PTHR10357 1 419 2.8E-231 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 PANTHER PTHR10357 450 528 2.8E-231 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 Gene3D G3DSA:3.20.20.80 6 101 4.7E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 Gene3D G3DSA:3.20.20.80 173 472 4.7E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 SUPERFAMILY SSF51011 474 547 1.04E-11 T 22-04-2016 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 Gene3D G3DSA:2.60.40.1180 475 548 1.3E-13 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 PANTHER PTHR10357:SF170 1 419 2.8E-231 T 22-04-2016 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 PANTHER PTHR10357:SF170 450 528 2.8E-231 T 22-04-2016 LMES_RS02435 8a9db129e0d6be1d6a9471c2267697ed 549 SUPERFAMILY SSF51445 6 471 1.46E-136 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 Gene3D G3DSA:1.10.1740.10 6 93 6.0E-13 T 22-04-2016 LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 SUPERFAMILY SSF88659 102 159 3.18E-6 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 Pfam PF04542 Sigma-70 region 2 15 75 1.1E-8 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 SUPERFAMILY SSF88946 7 84 1.1E-10 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 PANTHER PTHR30173:SF13 1 162 4.3E-12 T 22-04-2016 LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 PANTHER PTHR30173 1 162 4.3E-12 T 22-04-2016 LMES_RS08490 70eb55db385522009cd4a8a170ae42b2 163 Gene3D G3DSA:1.10.10.10 105 160 1.0E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 8 320 1.6E-94 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 PANTHER PTHR12561:SF3 1 334 6.6E-100 T 22-04-2016 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 SUPERFAMILY SSF82649 241 327 3.66E-23 T 22-04-2016 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 Gene3D G3DSA:3.30.390.50 241 327 4.5E-27 T 22-04-2016 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 242 325 6.2E-24 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 Gene3D G3DSA:3.90.1550.10 1 240 9.4E-79 T 22-04-2016 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 SUPERFAMILY SSF55681 1 240 1.07E-73 T 22-04-2016 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 PANTHER PTHR12561 1 334 6.6E-100 T 22-04-2016 LMES_RS03535 2d3e00631de580527b7e2058941facd9 336 Pfam PF03099 Biotin/lipoate A/B protein ligase family 46 154 7.5E-12 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LMES_RS00480 3b4133123fe03d2425a903986fffc507 179 Pfam PF07274 Protein of unknown function (DUF1440) 27 161 4.7E-56 T 22-04-2016 IPR009898 Protein of unknown function DUF1440 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 SUPERFAMILY SSF53850 11 265 8.71E-53 T 22-04-2016 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 Gene3D G3DSA:3.40.190.10 221 266 2.1E-32 T 22-04-2016 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 Gene3D G3DSA:3.40.190.10 41 120 2.1E-32 T 22-04-2016 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 Gene3D G3DSA:3.40.190.10 121 216 1.5E-20 T 22-04-2016 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 263 4.8E-49 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 PANTHER PTHR18966:SF205 7 265 5.5E-39 T 22-04-2016 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 PANTHER PTHR18966 7 265 5.5E-39 T 22-04-2016 LMES_RS00510 ec712ef83687f3e85cea864886f9acc7 271 SMART SM00062 44 265 2.6E-50 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS06255 c272761f5449d26aa8f2ae93121688f7 381 Gene3D G3DSA:3.40.50.2000 204 354 2.9E-19 T 22-04-2016 LMES_RS06255 c272761f5449d26aa8f2ae93121688f7 381 SUPERFAMILY SSF53756 4 379 5.38E-56 T 22-04-2016 LMES_RS06255 c272761f5449d26aa8f2ae93121688f7 381 Pfam PF00534 Glycosyl transferases group 1 216 353 1.9E-29 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS06255 c272761f5449d26aa8f2ae93121688f7 381 PANTHER PTHR12526 1 380 4.0E-44 T 22-04-2016 LMES_RS03035 7d0ad53131f877b8d4bec25049a494d4 173 SUPERFAMILY SSF53335 18 152 5.1E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS03035 7d0ad53131f877b8d4bec25049a494d4 173 Gene3D G3DSA:3.40.50.150 10 138 5.9E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS04210 79f0f80487a7ac288bbbb63e2a28ab7e 291 PANTHER PTHR39430 30 282 5.4E-34 T 22-04-2016 LMES_RS04210 79f0f80487a7ac288bbbb63e2a28ab7e 291 Pfam PF02517 CAAX protease self-immunity 126 217 1.3E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.0E-11 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.0E-11 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.0E-11 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.0E-11 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 Pfam PF01165 Ribosomal protein S21 3 56 4.6E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 55 3.0E-11 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 1.9E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.84 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LMES_RS05660 8b93782ce477b5ef5cdf983195813072 61 PANTHER PTHR21109 1 59 2.7E-19 T 22-04-2016 LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 PANTHER PTHR23117:SF13 1 198 4.4E-86 T 22-04-2016 LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 SMART SM00072 4 187 7.5E-65 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 1.1E-69 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 Gene3D G3DSA:3.40.50.300 3 27 3.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 Gene3D G3DSA:3.40.50.300 88 195 3.0E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 SUPERFAMILY SSF52540 3 191 2.16E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 PANTHER PTHR23117 1 198 4.4E-86 T 22-04-2016 LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 35.577 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 Pfam PF00625 Guanylate kinase 7 185 2.6E-52 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LMES_RS07645 074a0764f29f5fa961dc5c3d436230e2 198 Gene3D G3DSA:3.30.63.10 35 87 8.8E-28 T 22-04-2016 LMES_RS03970 e99e39c95d88875f493c150c4de0a657 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 148 4.3E-50 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03970 e99e39c95d88875f493c150c4de0a657 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 30.04 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03970 e99e39c95d88875f493c150c4de0a657 156 Gene3D G3DSA:3.40.50.960 6 154 3.7E-58 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03970 e99e39c95d88875f493c150c4de0a657 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 149 3.1E-51 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03970 e99e39c95d88875f493c150c4de0a657 156 SUPERFAMILY SSF52121 6 153 6.15E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS03970 e99e39c95d88875f493c150c4de0a657 156 PANTHER PTHR21058 2 156 3.0E-66 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 Gene3D G3DSA:3.90.230.10 135 363 2.2E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 Pfam PF00557 Metallopeptidase family M24 142 344 9.3E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 SUPERFAMILY SSF55920 137 363 7.59E-77 T 22-04-2016 IPR000994 Peptidase M24, structural domain LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 PANTHER PTHR10804 1 361 2.3E-85 T 22-04-2016 LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 SUPERFAMILY SSF53092 12 134 1.45E-18 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 Gene3D G3DSA:3.40.350.10 3 133 1.1E-23 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 PANTHER PTHR10804:SF86 1 361 2.3E-85 T 22-04-2016 LMES_RS05760 4507865d34cdbdb3331ea15a5aefb6a0 364 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 135 1.7E-13 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 LMES_RS06160 e9a200ba3b767a7b1bdc681107ebe1f1 156 SUPERFAMILY SSF69360 102 145 4.97E-7 T 22-04-2016 LMES_RS06160 e9a200ba3b767a7b1bdc681107ebe1f1 156 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 1 18 3.4E-4 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS06160 e9a200ba3b767a7b1bdc681107ebe1f1 156 Gene3D G3DSA:2.10.270.10 102 142 1.7E-6 T 22-04-2016 LMES_RS07830 5897b109e1aca1c1abbeaf3ce91e44b8 129 SMART SM00530 10 66 6.6E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS07830 5897b109e1aca1c1abbeaf3ce91e44b8 129 Gene3D G3DSA:1.10.260.40 7 118 4.3E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS07830 5897b109e1aca1c1abbeaf3ce91e44b8 129 Pfam PF01381 Helix-turn-helix 11 66 1.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS07830 5897b109e1aca1c1abbeaf3ce91e44b8 129 SUPERFAMILY SSF47413 2 68 1.2E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03070 9e281209c4369126a4be8153ab798056 297 Hamap MF_00188 Protease HtpX [htpX]. 10 297 26.383 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 LMES_RS03070 9e281209c4369126a4be8153ab798056 297 Pfam PF01435 Peptidase family M48 79 297 1.5E-33 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LMES_RS03070 9e281209c4369126a4be8153ab798056 297 Gene3D G3DSA:3.30.2010.10 75 160 2.4E-32 T 22-04-2016 LMES_RS03070 9e281209c4369126a4be8153ab798056 297 PANTHER PTHR10120:SF19 10 297 2.6E-89 T 22-04-2016 LMES_RS03070 9e281209c4369126a4be8153ab798056 297 PANTHER PTHR10120 10 297 2.6E-89 T 22-04-2016 LMES_RS02330 dfd1466376db10e485c9dc8bc7eeb18b 468 Gene3D G3DSA:3.40.605.10 3 237 9.8E-66 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LMES_RS02330 dfd1466376db10e485c9dc8bc7eeb18b 468 SUPERFAMILY SSF53720 3 454 5.63E-128 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LMES_RS02330 dfd1466376db10e485c9dc8bc7eeb18b 468 PANTHER PTHR11699:SF205 1 462 2.1E-214 T 22-04-2016 LMES_RS02330 dfd1466376db10e485c9dc8bc7eeb18b 468 PANTHER PTHR11699 1 462 2.1E-214 T 22-04-2016 LMES_RS02330 dfd1466376db10e485c9dc8bc7eeb18b 468 Gene3D G3DSA:3.40.309.10 238 426 7.4E-52 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LMES_RS02330 dfd1466376db10e485c9dc8bc7eeb18b 468 Pfam PF00171 Aldehyde dehydrogenase family 3 447 9.0E-123 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LMES_RS04600 b9f58dfa3618c28e95bfb133d5c82294 280 SUPERFAMILY SSF81345 12 263 3.01E-43 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LMES_RS04600 b9f58dfa3618c28e95bfb133d5c82294 280 PANTHER PTHR30477 7 279 4.2E-123 T 22-04-2016 LMES_RS04600 b9f58dfa3618c28e95bfb133d5c82294 280 PANTHER PTHR30477:SF13 7 279 4.2E-123 T 22-04-2016 LMES_RS04600 b9f58dfa3618c28e95bfb133d5c82294 280 Pfam PF00950 ABC 3 transport family 14 268 2.3E-88 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LMES_RS04600 b9f58dfa3618c28e95bfb133d5c82294 280 Gene3D G3DSA:1.10.3470.10 47 260 2.5E-10 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LMES_RS00380 d986ec1752d2ba0e24c45f1c9258d7a1 299 PANTHER PTHR32196:SF27 4 282 6.6E-81 T 22-04-2016 LMES_RS00380 d986ec1752d2ba0e24c45f1c9258d7a1 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 274 1.1E-26 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LMES_RS00380 d986ec1752d2ba0e24c45f1c9258d7a1 299 PANTHER PTHR32196 4 282 6.6E-81 T 22-04-2016 LMES_RS03675 8ed46e47d4405fc3504ff216dec5d539 253 PANTHER PTHR10954:SF7 5 253 6.2E-82 T 22-04-2016 LMES_RS03675 8ed46e47d4405fc3504ff216dec5d539 253 SUPERFAMILY SSF53098 61 253 4.55E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS03675 8ed46e47d4405fc3504ff216dec5d539 253 PANTHER PTHR10954 5 253 6.2E-82 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 LMES_RS03675 8ed46e47d4405fc3504ff216dec5d539 253 Hamap MF_00052_B Ribonuclease HII [rnhB]. 71 249 35.189 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 LMES_RS03675 8ed46e47d4405fc3504ff216dec5d539 253 Gene3D G3DSA:3.30.420.10 71 209 6.3E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS03675 8ed46e47d4405fc3504ff216dec5d539 253 Pfam PF01351 Ribonuclease HII 73 247 2.4E-33 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 118 137 2.0E-33 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 2.0E-33 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 51 69 2.0E-33 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 7 25 2.0E-33 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 30 48 2.0E-33 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 SUPERFAMILY SSF63411 4 152 3.39E-57 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 151 5.0E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 Gene3D G3DSA:3.30.1360.80 5 157 4.2E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PIRSF PIRSF006160 3 158 1.6E-59 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 PANTHER PTHR35799 6 155 2.6E-73 T 22-04-2016 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 3 156 35.491 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS08085 cb7848db3aa726e7fe6060b6ecab00c2 158 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 6 149 1.1E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LMES_RS06810 a8ffdcdc17469cbad5e212d9d6d8ad19 149 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 138 3.9E-36 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LMES_RS06810 a8ffdcdc17469cbad5e212d9d6d8ad19 149 SUPERFAMILY SSF52540 23 127 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06810 a8ffdcdc17469cbad5e212d9d6d8ad19 149 PANTHER PTHR33540 3 140 2.8E-40 T 22-04-2016 LMES_RS06810 a8ffdcdc17469cbad5e212d9d6d8ad19 149 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 128 1.3E-36 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LMES_RS06810 a8ffdcdc17469cbad5e212d9d6d8ad19 149 Gene3D G3DSA:3.40.50.300 3 141 2.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07905 56574adf21526aed8e16b2c15cea17bf 130 PIRSF PIRSF021265 1 122 2.0E-46 T 22-04-2016 IPR010360 Protein of unknown function DUF956 LMES_RS07905 56574adf21526aed8e16b2c15cea17bf 130 Pfam PF06115 Domain of unknown function (DUF956) 1 116 8.1E-44 T 22-04-2016 IPR010360 Protein of unknown function DUF956 LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 Pfam PF01176 Translation initiation factor 1A / IF-1 6 69 1.9E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 71 26.129 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 PANTHER PTHR33370 3 71 7.3E-46 T 22-04-2016 LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 Gene3D G3DSA:2.40.50.140 3 71 3.9E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 SMART SM00316 3 71 4.2E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 69 2.6E-37 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LMES_RS01005 41551a03cf4f98d96c1fd1083832d883 71 SUPERFAMILY SSF50249 3 70 4.28E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 Pfam PF00929 Exonuclease 8 164 2.5E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 Gene3D G3DSA:3.40.50.300 648 723 1.2E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 PANTHER PTHR30231:SF8 4 470 1.3E-47 T 22-04-2016 LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 Gene3D G3DSA:3.30.420.10 4 181 9.6E-50 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 Gene3D G3DSA:3.40.50.300 272 337 5.5E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 SUPERFAMILY SSF53098 3 183 2.68E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 SMART SM00479 6 173 6.2E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 PANTHER PTHR30231 4 470 1.3E-47 T 22-04-2016 LMES_RS06040 debd056861ee501fdc114eeceb529bd5 797 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 170 1.0E-29 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 270 2.1E-62 T 22-04-2016 LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 231 242 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 SUPERFAMILY SSF56219 1 271 3.01E-58 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 Gene3D G3DSA:3.60.10.10 1 271 2.7E-75 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 271 2.7E-77 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 PANTHER PTHR22748 1 272 4.8E-86 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LMES_RS06795 9992040defd47199469d67f0b4525d9c 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 249 8.1E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LMES_RS05095 1f01e3539b88d8035571a879e5db5000 283 Gene3D G3DSA:3.40.50.720 1 177 5.5E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05095 1f01e3539b88d8035571a879e5db5000 283 SUPERFAMILY SSF51735 3 159 4.58E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05095 1f01e3539b88d8035571a879e5db5000 283 Pfam PF02153 Prephenate dehydrogenase 17 269 1.2E-61 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 LMES_RS05095 1f01e3539b88d8035571a879e5db5000 283 PANTHER PTHR21363:SF0 1 280 4.4E-51 T 22-04-2016 LMES_RS05095 1f01e3539b88d8035571a879e5db5000 283 SUPERFAMILY SSF48179 173 280 3.29E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LMES_RS05095 1f01e3539b88d8035571a879e5db5000 283 PANTHER PTHR21363 1 280 4.4E-51 T 22-04-2016 LMES_RS08065 3cd4a10974fa597348ed0432726d3bfe 238 Gene3D G3DSA:3.40.50.880 4 237 1.5E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS08065 3cd4a10974fa597348ed0432726d3bfe 238 PANTHER PTHR11922:SF18 25 238 1.4E-52 T 22-04-2016 LMES_RS08065 3cd4a10974fa597348ed0432726d3bfe 238 Pfam PF07722 Peptidase C26 4 217 4.6E-64 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 LMES_RS08065 3cd4a10974fa597348ed0432726d3bfe 238 PANTHER PTHR11922 25 238 1.4E-52 T 22-04-2016 LMES_RS08065 3cd4a10974fa597348ed0432726d3bfe 238 SUPERFAMILY SSF52317 22 236 1.09E-35 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS08060 231c6886cacfcc9d9464447c130a46f1 297 Pfam PF02219 Methylenetetrahydrofolate reductase 9 280 1.8E-65 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LMES_RS08060 231c6886cacfcc9d9464447c130a46f1 297 Gene3D G3DSA:3.20.20.220 3 286 2.1E-76 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like LMES_RS08060 231c6886cacfcc9d9464447c130a46f1 297 PANTHER PTHR21091 145 275 9.2E-18 T 22-04-2016 LMES_RS08060 231c6886cacfcc9d9464447c130a46f1 297 PANTHER PTHR21091:SF31 145 275 9.2E-18 T 22-04-2016 LMES_RS08060 231c6886cacfcc9d9464447c130a46f1 297 SUPERFAMILY SSF51730 3 286 1.22E-68 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 PANTHER PTHR11079 2 223 6.3E-41 T 22-04-2016 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 PIRSF PIRSF006769 1 339 2.2E-90 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 102 8.1E-21 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 Gene3D G3DSA:3.40.140.10 3 146 3.2E-27 T 22-04-2016 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 PANTHER PTHR11079:SF10 2 223 6.3E-41 T 22-04-2016 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 Gene3D G3DSA:3.40.430.10 149 317 4.4E-41 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 SUPERFAMILY SSF53597 149 313 2.75E-37 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 Pfam PF01872 RibD C-terminal domain 149 307 2.3E-30 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 318 3.4E-81 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 LMES_RS03955 ba2aa3ff85026210a98d63866c481623 344 SUPERFAMILY SSF53927 3 135 1.63E-34 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 SUPERFAMILY SSF48208 267 747 2.86E-135 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 317 696 2.3E-142 T 22-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 14 260 9.3E-46 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 Gene3D G3DSA:2.60.420.10 682 751 4.9E-28 T 22-04-2016 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 700 750 1.5E-17 T 22-04-2016 IPR005194 Glycoside hydrolase family 65, C-terminal LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 PANTHER PTHR11051:SF11 1 750 0.0 T 22-04-2016 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 PIRSF PIRSF036289 1 752 1.4E-263 T 22-04-2016 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 Gene3D G3DSA:1.50.10.10 312 681 6.7E-141 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 Gene3D G3DSA:2.70.98.40 2 262 2.0E-75 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 PANTHER PTHR11051 1 750 0.0 T 22-04-2016 LMES_RS04280 44a530e964dc61843d6ca71e56fc91f6 752 SUPERFAMILY SSF74650 1 262 2.07E-77 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 Gene3D G3DSA:1.10.150.130 61 156 5.7E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 Pfam PF00589 Phage integrase family 170 330 3.3E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 PANTHER PTHR30349 65 347 1.3E-38 T 22-04-2016 LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 Pfam PF14657 AP2-like DNA-binding integrase domain 17 45 3.0E-7 T 22-04-2016 IPR028259 AP2-like integrase, N-terminal domain LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 PANTHER PTHR30349:SF20 65 347 1.3E-38 T 22-04-2016 LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 Gene3D G3DSA:1.10.443.10 166 333 4.6E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 61 114 1.4E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LMES_RS07535 a695d4d2980a17928e2fe63a1da60774 348 SUPERFAMILY SSF56349 61 336 2.5E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 PANTHER PTHR10000 1 272 3.4E-52 T 22-04-2016 LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 PANTHER PTHR10000:SF27 1 272 3.4E-52 T 22-04-2016 LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 8.4E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 SUPERFAMILY SSF56784 1 270 2.16E-51 T 22-04-2016 IPR023214 HAD-like domain LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 Gene3D G3DSA:3.40.50.1000 185 270 2.9E-36 T 22-04-2016 IPR023214 HAD-like domain LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 Gene3D G3DSA:3.40.50.1000 1 77 2.9E-36 T 22-04-2016 IPR023214 HAD-like domain LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 Gene3D G3DSA:3.30.1240.10 86 184 6.0E-25 T 22-04-2016 LMES_RS07940 198b0f825fe5a1a6357f6d81d27eebe3 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 266 8.8E-44 T 22-04-2016 IPR023214 HAD-like domain LMES_RS06310 4ff85a1b933b3391ec342e531be8c120 256 PIRSF PIRSF016557 2 256 2.8E-92 T 22-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 LMES_RS06310 4ff85a1b933b3391ec342e531be8c120 256 PANTHER PTHR39181:SF1 3 253 1.3E-59 T 22-04-2016 LMES_RS06310 4ff85a1b933b3391ec342e531be8c120 256 PANTHER PTHR39181 3 253 1.3E-59 T 22-04-2016 LMES_RS06310 4ff85a1b933b3391ec342e531be8c120 256 SUPERFAMILY SSF89550 1 210 4.71E-15 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 SUPERFAMILY SSF50249 1 67 2.04E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 SMART SM00357 3 67 2.1E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 PANTHER PTHR11544 1 72 3.7E-17 T 22-04-2016 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 5.8E-21 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 PIRSF PIRSF002599 1 73 8.3E-19 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 PRINTS PR00050 Cold shock protein signature 4 19 1.5E-9 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 PRINTS PR00050 Cold shock protein signature 25 34 1.5E-9 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 PRINTS PR00050 Cold shock protein signature 40 58 1.5E-9 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LMES_RS03380 a329dbe99077fc258056bbccc354e104 74 Gene3D G3DSA:2.40.50.140 1 66 8.5E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS06290 7486ff6de9d45913bcb67e6dae3ce912 273 Pfam PF00535 Glycosyl transferase family 2 6 170 5.3E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS06290 7486ff6de9d45913bcb67e6dae3ce912 273 Gene3D G3DSA:3.90.550.10 5 241 4.6E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06290 7486ff6de9d45913bcb67e6dae3ce912 273 PANTHER PTHR22916:SF27 5 273 2.1E-76 T 22-04-2016 LMES_RS06290 7486ff6de9d45913bcb67e6dae3ce912 273 SUPERFAMILY SSF53448 5 239 8.16E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06290 7486ff6de9d45913bcb67e6dae3ce912 273 PANTHER PTHR22916 5 273 2.1E-76 T 22-04-2016 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 292 6.7E-70 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 PANTHER PTHR11562 12 299 3.6E-80 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 SUPERFAMILY SSF160240 218 290 1.07E-8 T 22-04-2016 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 Pfam PF01545 Cation efflux family 12 209 3.1E-42 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 PANTHER PTHR11562:SF17 12 299 3.6E-80 T 22-04-2016 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 SUPERFAMILY SSF161111 6 212 5.75E-47 T 22-04-2016 LMES_RS01585 2949e76bc4aab81c1c2bb4ebad076b8f 301 Gene3D G3DSA:1.20.1510.10 11 210 4.1E-50 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Gene3D G3DSA:3.30.479.20 56 145 9.3E-15 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 PANTHER PTHR11741 1 291 1.2E-117 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 SUPERFAMILY SSF54713 152 290 3.01E-47 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 290 72.868 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Pfam PF00889 Elongation factor TS 70 272 7.7E-66 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Gene3D G3DSA:1.10.8.10 1 54 2.9E-25 T 22-04-2016 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 290 1.2E-98 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Gene3D G3DSA:1.10.286.20 194 236 1.5E-17 T 22-04-2016 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 SUPERFAMILY SSF54713 55 145 9.97E-18 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 SUPERFAMILY SSF46934 1 55 6.8E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Gene3D G3DSA:3.30.479.20 237 272 1.0E-25 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LMES_RS05270 841dcf203b74b005180071e42e81ba87 291 Gene3D G3DSA:3.30.479.20 152 188 1.0E-25 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LMES_RS06140 c2aa4da6fe2b37b9e1dfdbb32227e823 208 Pfam PF02397 Bacterial sugar transferase 11 202 1.2E-52 T 22-04-2016 IPR003362 Bacterial sugar transferase LMES_RS06140 c2aa4da6fe2b37b9e1dfdbb32227e823 208 PANTHER PTHR30576 3 208 3.6E-71 T 22-04-2016 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 57 285 1.5E-48 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 Pfam PF14310 Fibronectin type III-like domain 582 652 3.6E-21 T 22-04-2016 IPR026891 Fibronectin type III-like domain LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 218 235 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 Gene3D G3DSA:3.40.50.1700 304 551 1.3E-62 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 Gene3D G3DSA:3.20.20.300 9 303 7.2E-91 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 317 548 3.9E-47 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 SMART SM01217 582 652 7.3E-26 T 22-04-2016 IPR026891 Fibronectin type III-like domain LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 SUPERFAMILY SSF51445 9 316 1.16E-82 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PANTHER PTHR30620 13 666 5.2E-253 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 SUPERFAMILY SSF52279 317 551 9.94E-48 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PANTHER PTHR30620:SF18 13 666 5.2E-253 T 22-04-2016 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PRINTS PR00133 Glycosyl hydrolase family 3 signature 218 236 2.8E-30 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PRINTS PR00133 Glycosyl hydrolase family 3 signature 117 133 2.8E-30 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PRINTS PR00133 Glycosyl hydrolase family 3 signature 71 90 2.8E-30 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PRINTS PR00133 Glycosyl hydrolase family 3 signature 35 51 2.8E-30 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04195 5aca3a3904bad0edb35dcda998a48209 741 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 2.8E-30 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 Pfam PF13602 Zinc-binding dehydrogenase 189 308 1.0E-21 T 22-04-2016 LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 Gene3D G3DSA:3.40.50.720 153 241 1.7E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 SMART SM00829 10 308 5.5E-13 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 PANTHER PTHR11695:SF294 15 312 9.1E-97 T 22-04-2016 LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 SUPERFAMILY SSF50129 1 152 7.15E-39 T 22-04-2016 IPR011032 GroES-like LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 147 168 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 93 2.4E-8 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 SUPERFAMILY SSF51735 120 237 1.55E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 Gene3D G3DSA:3.90.180.10 1 152 4.6E-45 T 22-04-2016 IPR011032 GroES-like LMES_RS04580 0044da13f443664a31aa43afd9a95922 312 PANTHER PTHR11695 15 312 9.1E-97 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 SUPERFAMILY SSF46894 125 227 3.4E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 PANTHER PTHR26402 1 227 4.4E-92 T 22-04-2016 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 Gene3D G3DSA:3.40.50.2300 1 124 9.0E-39 T 22-04-2016 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 Pfam PF00072 Response regulator receiver domain 3 112 1.5E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 1.1E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 SMART SM00862 150 226 2.1E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 SUPERFAMILY SSF52172 1 122 3.42E-38 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 PANTHER PTHR26402:SF50 1 227 4.4E-92 T 22-04-2016 LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 Gene3D G3DSA:1.10.10.10 126 229 9.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01650 ee02a81598899d4839a06c8597c8a745 230 SMART SM00448 1 112 1.8E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS04615 4b6eb89e5298c8ad74f37086a75ba1ba 448 SUPERFAMILY SSF52777 43 166 7.67E-8 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:3.20.20.80 502 796 3.3E-25 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Pfam PF01473 Putative cell wall binding repeat 1235 1252 0.31 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Pfam PF01473 Putative cell wall binding repeat 291 308 0.01 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Pfam PF01473 Putative cell wall binding repeat 1214 1233 2.2E-5 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Pfam PF01473 Putative cell wall binding repeat 270 288 0.82 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 SUPERFAMILY SSF69360 1188 1320 3.53E-20 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:2.20.120.10 301 331 3.4E-6 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:2.10.270.10 189 263 1.8E-7 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 SUPERFAMILY SSF69360 166 334 6.59E-22 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:2.10.270.10 264 300 2.5E-12 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:2.10.270.10 1257 1320 1.2E-6 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:2.10.270.10 1188 1252 2.3E-13 T 22-04-2016 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 SUPERFAMILY SSF51445 956 1105 3.5E-21 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 SUPERFAMILY SSF51445 450 705 8.55E-34 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 SUPERFAMILY SSF51445 742 789 8.55E-34 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Gene3D G3DSA:3.20.20.80 961 1062 6.9E-18 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 2 22 2.0E-7 T 22-04-2016 IPR022263 KxYKxGKxW signal peptide LMES_RS06180 c3d11884534ca7555b0270a6d151d4f0 1323 Pfam PF02324 Glycosyl hydrolase family 70 400 1200 0.0 T 22-04-2016 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 Gene3D G3DSA:3.50.50.60 114 312 3.9E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PANTHER PTHR22912 1 439 7.2E-104 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 304 1.4E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PANTHER PTHR22912:SF147 1 439 7.2E-104 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.1E-12 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 1.1E-12 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.1E-12 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 1.1E-12 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 5.0E-23 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 5.0E-23 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.0E-23 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 5.0E-23 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 5.0E-23 T 22-04-2016 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 Gene3D G3DSA:3.50.50.60 1 113 6.5E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 SUPERFAMILY SSF51905 1 312 1.94E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 Gene3D G3DSA:3.30.390.30 334 441 9.5E-28 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LMES_RS09385 ea755101943238a28a485ce15f6305e1 451 SUPERFAMILY SSF55424 320 441 1.56E-27 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LMES_RS00460 af4771388ecbd0f7a3b56b85634d6289 700 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 66 221 8.3E-29 T 22-04-2016 LMES_RS00460 af4771388ecbd0f7a3b56b85634d6289 700 PANTHER PTHR33908 2 267 7.1E-41 T 22-04-2016 LMES_RS00460 af4771388ecbd0f7a3b56b85634d6289 700 PANTHER PTHR33908 366 571 7.1E-41 T 22-04-2016 LMES_RS00460 af4771388ecbd0f7a3b56b85634d6289 700 PANTHER PTHR33908:SF3 2 267 7.1E-41 T 22-04-2016 LMES_RS00460 af4771388ecbd0f7a3b56b85634d6289 700 PANTHER PTHR33908:SF3 366 571 7.1E-41 T 22-04-2016 LMES_RS03155 a503279f8bc97507b30df37c4ac02fe0 384 Pfam PF01594 Domain of unknown function DUF20 27 365 1.9E-65 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LMES_RS03155 a503279f8bc97507b30df37c4ac02fe0 384 PANTHER PTHR21716 23 366 8.7E-74 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like LMES_RS03155 a503279f8bc97507b30df37c4ac02fe0 384 PANTHER PTHR21716:SF10 23 366 8.7E-74 T 22-04-2016 LMES_RS00670 a3cbcf160800fa033c8496b15d3c63c6 387 Pfam PF06197 Protein of unknown function (DUF998) 198 367 1.6E-7 T 22-04-2016 IPR009339 Protein of unknown function DUF998 LMES_RS00670 a3cbcf160800fa033c8496b15d3c63c6 387 Gene3D G3DSA:2.10.260.10 8 44 1.3E-4 T 22-04-2016 LMES_RS01545 73e14aea271af7eb07da46b16ef3413e 211 Pfam PF07853 Protein of unknown function (DUF1648) 11 58 1.2E-16 T 22-04-2016 IPR012867 Domain of unknown function DUF1648 LMES_RS01545 73e14aea271af7eb07da46b16ef3413e 211 Pfam PF13630 SdpI/YhfL protein family 132 204 2.7E-16 T 22-04-2016 IPR025962 SdpI/YhfL protein family LMES_RS01545 73e14aea271af7eb07da46b16ef3413e 211 PIRSF PIRSF038959 1 210 3.8E-31 T 22-04-2016 IPR026272 Immunity protein SdpI LMES_RS01545 73e14aea271af7eb07da46b16ef3413e 211 PANTHER PTHR37810:SF1 7 211 1.3E-19 T 22-04-2016 LMES_RS01545 73e14aea271af7eb07da46b16ef3413e 211 PANTHER PTHR37810 7 211 1.3E-19 T 22-04-2016 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PANTHER PTHR10584:SF184 1 302 2.9E-77 T 22-04-2016 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 Gene3D G3DSA:3.40.1190.20 2 303 3.3E-82 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 302 4.7E-97 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PANTHER PTHR10584 1 302 2.9E-77 T 22-04-2016 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PRINTS PR00990 Ribokinase signature 105 118 7.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PRINTS PR00990 Ribokinase signature 219 230 7.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PRINTS PR00990 Ribokinase signature 34 53 7.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PRINTS PR00990 Ribokinase signature 7 28 7.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 PRINTS PR00990 Ribokinase signature 174 189 7.3E-33 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 SUPERFAMILY SSF53613 3 303 4.37E-75 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS03820 7e8a95009335d326499871c1d45c1a16 313 Pfam PF00294 pfkB family carbohydrate kinase 3 297 1.1E-59 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LMES_RS00975 df28a49fb44237dfe34f18db29c88f35 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 117 1.6E-45 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00975 df28a49fb44237dfe34f18db29c88f35 117 SUPERFAMILY SSF53137 7 115 9.59E-50 T 22-04-2016 LMES_RS00975 df28a49fb44237dfe34f18db29c88f35 117 Gene3D G3DSA:3.30.420.100 24 117 6.6E-36 T 22-04-2016 LMES_RS00975 df28a49fb44237dfe34f18db29c88f35 117 PANTHER PTHR12899 6 117 2.1E-37 T 22-04-2016 LMES_RS00975 df28a49fb44237dfe34f18db29c88f35 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 117 6.1E-41 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00975 df28a49fb44237dfe34f18db29c88f35 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 117 27.911 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS04855 43b07db2184b3059f8d205f72d08a170 176 PANTHER PTHR15394 2 134 5.5E-12 T 22-04-2016 LMES_RS04855 43b07db2184b3059f8d205f72d08a170 176 SUPERFAMILY SSF53474 3 162 1.78E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04855 43b07db2184b3059f8d205f72d08a170 176 Pfam PF06821 Serine hydrolase 15 162 3.8E-5 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- LMES_RS04855 43b07db2184b3059f8d205f72d08a170 176 Gene3D G3DSA:3.40.50.1820 1 164 7.9E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 Gene3D G3DSA:3.40.50.880 27 280 1.6E-73 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 Pfam PF04204 Homoserine O-succinyltransferase 27 273 5.8E-65 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 29 270 2.0E-42 T 22-04-2016 LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 PIRSF PIRSF000450 16 285 1.1E-66 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 PANTHER PTHR20919:SF0 27 295 4.7E-53 T 22-04-2016 LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 PANTHER PTHR20919 27 295 4.7E-53 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 LMES_RS08105 e923eb5acf96925a225e1e1cbf8aebd4 305 SUPERFAMILY SSF52317 26 275 5.17E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS07445 5b69974b05e4457bebf7353f3438b5d8 132 Gene3D G3DSA:3.30.1330.70 19 128 7.2E-10 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 LMES_RS07445 5b69974b05e4457bebf7353f3438b5d8 132 SUPERFAMILY SSF103084 1 127 5.75E-18 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 SUPERFAMILY SSF51230 2 88 9.68E-26 T 22-04-2016 IPR011053 Single hybrid motif LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 SUPERFAMILY SSF52777 190 427 1.47E-77 T 22-04-2016 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 Pfam PF02817 e3 binding domain 126 161 1.8E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 Gene3D G3DSA:3.30.559.10 190 427 5.3E-82 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 Gene3D G3DSA:4.10.320.10 123 172 1.2E-16 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 SUPERFAMILY SSF47005 123 165 4.58E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 Pfam PF00364 Biotin-requiring enzyme 5 75 4.9E-23 T 22-04-2016 IPR000089 Biotin/lipoyl attachment LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 199 427 1.1E-78 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 Gene3D G3DSA:2.40.50.100 2 87 2.6E-26 T 22-04-2016 LMES_RS03550 8f5b0d815a7235a35ae0f9b2c99797d7 429 PANTHER PTHR23151 5 429 8.3E-141 T 22-04-2016 LMES_RS06730 b790d4c49f504a46adc38bfa8723ff1e 147 PANTHER PTHR10173 6 147 4.1E-50 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 LMES_RS06730 b790d4c49f504a46adc38bfa8723ff1e 147 SUPERFAMILY SSF51316 3 146 1.52E-57 T 22-04-2016 IPR011057 Mss4-like LMES_RS06730 b790d4c49f504a46adc38bfa8723ff1e 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 138 4.9E-58 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LMES_RS06730 b790d4c49f504a46adc38bfa8723ff1e 147 Gene3D G3DSA:2.170.150.20 2 145 1.1E-59 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LMES_RS06730 b790d4c49f504a46adc38bfa8723ff1e 147 Pfam PF01641 SelR domain 8 129 2.1E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LMES_RS02945 bf67de00be02c69f7adb5f03d2fa9685 285 SUPERFAMILY SSF56300 1 151 1.45E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS02945 bf67de00be02c69f7adb5f03d2fa9685 285 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 152 9.4E-7 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type LMES_RS02945 bf67de00be02c69f7adb5f03d2fa9685 285 Gene3D G3DSA:3.60.21.10 1 183 7.1E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 Gene3D G3DSA:1.10.150.260 6 74 9.9E-31 T 22-04-2016 IPR023089 YozE SAM-like domain LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 Hamap MF_01538 UPF0346 protein . 4 74 22.126 T 22-04-2016 IPR010673 Protein of unknown function UPF0346 LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 PIRSF PIRSF037262 4 75 2.8E-29 T 22-04-2016 IPR010673 Protein of unknown function UPF0346 LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 Pfam PF06855 YozE SAM-like fold 7 72 1.0E-28 T 22-04-2016 IPR023089 YozE SAM-like domain LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 SUPERFAMILY SSF140652 6 73 1.44E-28 T 22-04-2016 IPR023089 YozE SAM-like domain LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 PANTHER PTHR41284 5 75 9.1E-21 T 22-04-2016 LMES_RS03665 a30e3675683915ba1dc64f2579943b88 75 PANTHER PTHR41284:SF1 5 75 9.1E-21 T 22-04-2016 LMES_RS00610 339656c9127939c75860a8997c0c93f9 286 SUPERFAMILY SSF53850 39 280 1.41E-32 T 22-04-2016 LMES_RS00610 339656c9127939c75860a8997c0c93f9 286 SMART SM00062 40 278 1.2E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS00610 339656c9127939c75860a8997c0c93f9 286 Gene3D G3DSA:3.40.190.10 118 212 1.1E-7 T 22-04-2016 LMES_RS00610 339656c9127939c75860a8997c0c93f9 286 Gene3D G3DSA:3.40.190.10 39 117 2.8E-23 T 22-04-2016 LMES_RS00610 339656c9127939c75860a8997c0c93f9 286 Gene3D G3DSA:3.40.190.10 237 279 2.8E-23 T 22-04-2016 LMES_RS00610 339656c9127939c75860a8997c0c93f9 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 276 2.3E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 PANTHER PTHR32282:SF5 1 642 4.3E-171 T 22-04-2016 LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 343 591 9.8E-33 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 81 605 6.4E-160 T 22-04-2016 LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 SUPERFAMILY SSF56601 283 641 2.58E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 SUPERFAMILY SSF56601 231 253 2.58E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 Gene3D G3DSA:1.10.3810.10 71 252 3.1E-67 T 22-04-2016 LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 PANTHER PTHR32282 1 642 4.3E-171 T 22-04-2016 LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 SUPERFAMILY SSF53955 59 269 2.45E-66 T 22-04-2016 IPR023346 Lysozyme-like domain LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 Pfam PF00912 Transglycosylase 72 249 5.0E-58 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LMES_RS05345 831d3017944ba0c1622eae0cfde54413 686 Gene3D G3DSA:3.40.710.10 253 645 2.5E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LMES_RS03120 2131e91a1c33ea9c35e87ab78e4c7a37 75 Pfam PF05532 CsbD-like 5 57 2.6E-14 T 22-04-2016 IPR008462 CsbD-like LMES_RS03120 2131e91a1c33ea9c35e87ab78e4c7a37 75 SUPERFAMILY SSF69047 5 64 5.89E-10 T 22-04-2016 IPR008462 CsbD-like LMES_RS03120 2131e91a1c33ea9c35e87ab78e4c7a37 75 Gene3D G3DSA:1.10.1470.10 4 67 4.2E-13 T 22-04-2016 IPR008462 CsbD-like LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 Pfam PF07702 UTRA domain 90 227 9.5E-39 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 Gene3D G3DSA:1.10.10.10 3 65 1.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 PANTHER PTHR11751:SF333 4 75 6.6E-25 T 22-04-2016 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 PANTHER PTHR11751:SF333 122 141 6.6E-25 T 22-04-2016 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 Gene3D G3DSA:3.40.1410.10 66 231 3.4E-53 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 SMART SM00345 9 68 4.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 SUPERFAMILY SSF46785 3 72 6.52E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 SMART SM00866 89 227 1.1E-40 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 SUPERFAMILY SSF64288 56 231 2.83E-50 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 PANTHER PTHR11751 4 75 6.6E-25 T 22-04-2016 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 PANTHER PTHR11751 122 141 6.6E-25 T 22-04-2016 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 3.4E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 6.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS02025 74d9e411143afc3d2bf1878d54872700 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 6.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS04330 b71bb665549d7a949dc3bffc2becae54 151 PANTHER PTHR21021 1 151 3.7E-45 T 22-04-2016 LMES_RS04330 b71bb665549d7a949dc3bffc2becae54 151 PANTHER PTHR21021:SF15 1 151 3.7E-45 T 22-04-2016 LMES_RS04330 b71bb665549d7a949dc3bffc2becae54 151 Gene3D G3DSA:3.30.450.40 10 150 8.1E-46 T 22-04-2016 IPR029016 GAF domain-like LMES_RS04330 b71bb665549d7a949dc3bffc2becae54 151 Pfam PF13185 GAF domain 38 151 2.2E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 LMES_RS04330 b71bb665549d7a949dc3bffc2becae54 151 SUPERFAMILY SSF55781 11 151 1.41E-37 T 22-04-2016 IPR029016 GAF domain-like LMES_RS09025 5b869fcae5be1c915b1f6d7d13a932b7 158 PANTHER PTHR30505:SF3 1 157 1.7E-25 T 22-04-2016 LMES_RS09025 5b869fcae5be1c915b1f6d7d13a932b7 158 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 151 1.8E-28 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS09025 5b869fcae5be1c915b1f6d7d13a932b7 158 SUPERFAMILY SSF55804 10 151 2.96E-25 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LMES_RS09025 5b869fcae5be1c915b1f6d7d13a932b7 158 PANTHER PTHR30505 1 157 1.7E-25 T 22-04-2016 LMES_RS09025 5b869fcae5be1c915b1f6d7d13a932b7 158 Gene3D G3DSA:3.40.930.10 2 152 2.1E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 PANTHER PTHR30055:SF55 10 195 1.2E-17 T 22-04-2016 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 Pfam PF14278 Transcriptional regulator C-terminal region 104 179 1.7E-13 T 22-04-2016 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 PANTHER PTHR30055 10 195 1.2E-17 T 22-04-2016 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 7.5E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 7.5E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 Gene3D G3DSA:1.10.357.10 3 195 1.2E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 SUPERFAMILY SSF46689 5 70 6.16E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS08530 9ff8f2371f1f050c4cf57756580ab8a0 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 2.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS04805 f9d32983299da1be0b45c5a3490b640a 136 Pfam PF13673 Acetyltransferase (GNAT) domain 36 128 1.2E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS04805 f9d32983299da1be0b45c5a3490b640a 136 PANTHER PTHR13355:SF5 35 123 1.2E-12 T 22-04-2016 LMES_RS04805 f9d32983299da1be0b45c5a3490b640a 136 Gene3D G3DSA:3.40.630.30 12 126 1.3E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04805 f9d32983299da1be0b45c5a3490b640a 136 SUPERFAMILY SSF55729 15 127 2.83E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04805 f9d32983299da1be0b45c5a3490b640a 136 PANTHER PTHR13355 35 123 1.2E-12 T 22-04-2016 LMES_RS01275 e3aa522a6274f59b995687f29676f5a0 172 Pfam PF01966 HD domain 40 143 1.6E-6 T 22-04-2016 IPR006674 HD domain LMES_RS01275 e3aa522a6274f59b995687f29676f5a0 172 SUPERFAMILY SSF109604 18 158 7.85E-23 T 22-04-2016 LMES_RS01275 e3aa522a6274f59b995687f29676f5a0 172 Gene3D G3DSA:1.10.3210.10 18 147 2.5E-21 T 22-04-2016 IPR006674 HD domain LMES_RS01065 c7c2ce16f995dbb14e561ce2f74f0ccb 136 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 70 5.8E-8 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LMES_RS01065 c7c2ce16f995dbb14e561ce2f74f0ccb 136 SUPERFAMILY SSF50475 10 126 8.98E-12 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LMES_RS01065 c7c2ce16f995dbb14e561ce2f74f0ccb 136 Gene3D G3DSA:2.30.110.10 2 128 3.8E-35 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LMES_RS06330 f1fc936989b9040b7b05f4f4aa9a095e 450 Pfam PF05525 Branched-chain amino acid transport protein 9 435 4.5E-118 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LMES_RS06330 f1fc936989b9040b7b05f4f4aa9a095e 450 PANTHER PTHR30588 3 450 4.2E-130 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LMES_RS06330 f1fc936989b9040b7b05f4f4aa9a095e 450 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 17 426 1.1E-98 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LMES_RS06330 f1fc936989b9040b7b05f4f4aa9a095e 450 PANTHER PTHR30588:SF2 3 450 4.2E-130 T 22-04-2016 LMES_RS02630 598292a0c25858d9168c11c3a287e452 306 Pfam PF00892 EamA-like transporter family 5 144 3.9E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LMES_RS02630 598292a0c25858d9168c11c3a287e452 306 Pfam PF00892 EamA-like transporter family 156 289 1.0E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LMES_RS02630 598292a0c25858d9168c11c3a287e452 306 SUPERFAMILY SSF103481 49 146 2.62E-8 T 22-04-2016 LMES_RS02630 598292a0c25858d9168c11c3a287e452 306 PANTHER PTHR22911 2 304 3.2E-51 T 22-04-2016 LMES_RS02630 598292a0c25858d9168c11c3a287e452 306 SUPERFAMILY SSF103481 193 291 8.5E-11 T 22-04-2016 LMES_RS02630 598292a0c25858d9168c11c3a287e452 306 PANTHER PTHR22911:SF23 2 304 3.2E-51 T 22-04-2016 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 Gene3D G3DSA:3.40.190.10 319 411 6.8E-24 T 22-04-2016 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 SUPERFAMILY SSF53850 320 572 8.54E-79 T 22-04-2016 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 PANTHER PTHR30177 10 280 1.6E-153 T 22-04-2016 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 PANTHER PTHR30177 351 567 1.6E-153 T 22-04-2016 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 Gene3D G3DSA:3.40.190.100 412 524 2.9E-37 T 22-04-2016 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 Gene3D G3DSA:1.10.3720.10 90 278 1.3E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 322 562 8.7E-65 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 SUPERFAMILY SSF161098 91 278 9.42E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS01685 775628673e95128c05b9154e2f136f8c 573 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 271 5.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS03560 3547fd5375176269341334d7c3b6e4b1 263 Pfam PF12697 Alpha/beta hydrolase family 23 251 4.1E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LMES_RS03560 3547fd5375176269341334d7c3b6e4b1 263 Gene3D G3DSA:3.40.50.1820 3 258 3.1E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS03560 3547fd5375176269341334d7c3b6e4b1 263 PANTHER PTHR10992 4 259 1.0E-37 T 22-04-2016 LMES_RS03560 3547fd5375176269341334d7c3b6e4b1 263 SUPERFAMILY SSF53474 2 258 5.73E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS06440 df1b2742486839e2f8dee8d6cb9c631a 162 SUPERFAMILY SSF101307 4 157 1.06E-38 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LMES_RS06440 df1b2742486839e2f8dee8d6cb9c631a 162 Gene3D G3DSA:1.10.3760.10 2 150 3.9E-45 T 22-04-2016 IPR027416 YutG-like domain LMES_RS06440 df1b2742486839e2f8dee8d6cb9c631a 162 PANTHER PTHR35336 4 150 2.3E-20 T 22-04-2016 LMES_RS06440 df1b2742486839e2f8dee8d6cb9c631a 162 PANTHER PTHR35336:SF1 4 150 2.3E-20 T 22-04-2016 LMES_RS06440 df1b2742486839e2f8dee8d6cb9c631a 162 Pfam PF04608 Phosphatidylglycerophosphatase A 12 153 2.6E-14 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LMES_RS06440 df1b2742486839e2f8dee8d6cb9c631a 162 PIRSF PIRSF019587 1 155 2.3E-28 T 22-04-2016 IPR026038 Putative phosphatidylglycerophosphatase LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 SUPERFAMILY SSF55681 92 345 1.93E-76 T 22-04-2016 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 344 42.127 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 88 9.5E-20 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 345 4.5E-99 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 Pfam PF01409 tRNA synthetases class II core domain (F) 92 344 2.3E-95 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 PANTHER PTHR11538 91 344 1.4E-98 T 22-04-2016 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 SUPERFAMILY SSF46589 22 99 2.98E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LMES_RS02130 0f9acd6465927cdbe8f417ee51260aa8 349 Gene3D G3DSA:3.30.930.10 20 345 6.0E-120 T 22-04-2016 LMES_RS02180 19c3a15e88a7e47d1b320a3517833bf9 202 PANTHER PTHR30471:SF3 56 198 1.8E-37 T 22-04-2016 LMES_RS02180 19c3a15e88a7e47d1b320a3517833bf9 202 Gene3D G3DSA:3.40.140.10 80 196 2.9E-36 T 22-04-2016 LMES_RS02180 19c3a15e88a7e47d1b320a3517833bf9 202 PANTHER PTHR30471 56 198 1.8E-37 T 22-04-2016 LMES_RS02180 19c3a15e88a7e47d1b320a3517833bf9 202 Pfam PF04002 RadC-like JAB domain 80 195 5.5E-34 T 22-04-2016 IPR025657 RadC-like JAB domain LMES_RS02180 19c3a15e88a7e47d1b320a3517833bf9 202 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 147 152 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site LMES_RS02615 ce35e126429bac10aa696996d8fc42bd 618 PANTHER PTHR23028:SF53 3 492 3.6E-89 T 22-04-2016 LMES_RS02615 ce35e126429bac10aa696996d8fc42bd 618 PANTHER PTHR23028 3 492 3.6E-89 T 22-04-2016 LMES_RS02615 ce35e126429bac10aa696996d8fc42bd 618 Pfam PF01757 Acyltransferase family 8 337 2.5E-27 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LMES_RS02615 ce35e126429bac10aa696996d8fc42bd 618 SUPERFAMILY SSF52266 457 609 4.89E-8 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS05340 d74984138d641ff1709c90228cd3ccbb 117 Gene3D G3DSA:1.20.1500.10 1 112 4.3E-37 T 22-04-2016 IPR023378 YheA/YmcA-like domain LMES_RS05340 d74984138d641ff1709c90228cd3ccbb 117 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 108 2.4E-22 T 22-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA LMES_RS05340 d74984138d641ff1709c90228cd3ccbb 117 Hamap MF_01526 UPF0342 protein . 2 113 17.201 T 22-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA LMES_RS05340 d74984138d641ff1709c90228cd3ccbb 117 PANTHER PTHR41254 2 117 7.6E-27 T 22-04-2016 LMES_RS05340 d74984138d641ff1709c90228cd3ccbb 117 SUPERFAMILY SSF158622 3 113 2.75E-31 T 22-04-2016 IPR023378 YheA/YmcA-like domain LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 PANTHER PTHR30305 1 314 5.3E-107 T 22-04-2016 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 310 35.711 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 307 9.1E-98 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 SUPERFAMILY SSF75138 4 132 3.27E-39 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 SUPERFAMILY SSF53795 134 302 3.36E-28 T 22-04-2016 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 PANTHER PTHR30305:SF1 1 314 5.3E-107 T 22-04-2016 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 Gene3D G3DSA:3.40.1390.20 5 132 4.5E-43 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 Pfam PF07475 HPr Serine kinase C-terminal domain 132 303 1.3E-62 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 Pfam PF02603 HPr Serine kinase N terminus 6 129 2.5E-37 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 LMES_RS02865 5730de295e394c17143c4672fd7f43b2 321 Gene3D G3DSA:3.40.50.300 135 310 6.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 SUPERFAMILY SSF52467 6 232 3.07E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 Gene3D G3DSA:3.30.1600.10 121 162 2.6E-12 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 Gene3D G3DSA:3.30.1600.10 33 72 2.6E-12 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 Pfam PF02146 Sir2 family 22 190 9.2E-31 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 PANTHER PTHR11085 5 232 3.4E-47 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 Gene3D G3DSA:3.40.50.1220 5 32 1.5E-31 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 Gene3D G3DSA:3.40.50.1220 166 231 1.5E-31 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS01580 d54b1843d315dfa545f0d7f00ec839c0 234 Gene3D G3DSA:3.40.50.1220 83 120 1.5E-31 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LMES_RS01830 d57347d0320e65bcd9cb5d3bc7790009 408 PANTHER PTHR12526:SF363 1 379 8.3E-76 T 22-04-2016 LMES_RS01830 d57347d0320e65bcd9cb5d3bc7790009 408 Pfam PF13439 Glycosyltransferase Family 4 15 180 7.3E-31 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LMES_RS01830 d57347d0320e65bcd9cb5d3bc7790009 408 Gene3D G3DSA:3.40.50.2000 187 342 1.0E-20 T 22-04-2016 LMES_RS01830 d57347d0320e65bcd9cb5d3bc7790009 408 Pfam PF00534 Glycosyl transferases group 1 190 355 1.8E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS01830 d57347d0320e65bcd9cb5d3bc7790009 408 PANTHER PTHR12526 1 379 8.3E-76 T 22-04-2016 LMES_RS01830 d57347d0320e65bcd9cb5d3bc7790009 408 SUPERFAMILY SSF53756 1 376 1.41E-70 T 22-04-2016 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 PANTHER PTHR15680 8 117 8.7E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 4 116 31.678 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 PIRSF PIRSF002191 1 119 3.2E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 PRINTS PR00061 Ribosomal protein L19 signature 6 35 2.2E-41 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 PRINTS PR00061 Ribosomal protein L19 signature 36 65 2.2E-41 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 PRINTS PR00061 Ribosomal protein L19 signature 90 115 2.2E-41 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 6 115 1.3E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 Pfam PF01245 Ribosomal protein L19 6 115 2.8E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02915 f7ff317f24ceb14d040623ac338dfb3f 119 SUPERFAMILY SSF50104 3 117 2.91E-46 T 22-04-2016 IPR008991 Translation protein SH3-like domain LMES_RS03250 8f47cf252d64b1f1af6078b9c06f6559 199 Gene3D G3DSA:1.10.472.60 74 143 8.9E-4 T 22-04-2016 IPR023169 UPF0413, central domain LMES_RS03250 8f47cf252d64b1f1af6078b9c06f6559 199 Pfam PF13743 Thioredoxin 5 152 4.3E-23 T 22-04-2016 LMES_RS03745 789491b4c94314a4ccf6f5bbc114d689 155 PANTHER PTHR34299:SF1 11 146 3.6E-26 T 22-04-2016 LMES_RS03745 789491b4c94314a4ccf6f5bbc114d689 155 PANTHER PTHR34299 11 146 3.6E-26 T 22-04-2016 LMES_RS03745 789491b4c94314a4ccf6f5bbc114d689 155 Pfam PF01219 Prokaryotic diacylglycerol kinase 31 132 1.8E-29 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 LMES_RS03745 789491b4c94314a4ccf6f5bbc114d689 155 Gene3D G3DSA:1.10.3830.10 17 137 4.8E-36 T 22-04-2016 LMES_RS06660 b142c053e4549f514ddce2db0d3c529e 119 PANTHER PTHR34297:SF2 1 119 2.3E-35 T 22-04-2016 LMES_RS06660 b142c053e4549f514ddce2db0d3c529e 119 PANTHER PTHR34297 1 119 2.3E-35 T 22-04-2016 LMES_RS06660 b142c053e4549f514ddce2db0d3c529e 119 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 1.5E-31 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 LMES_RS04430 20ed5aadc3bcf93383c3dd6e39ca48b3 402 Pfam PF07690 Major Facilitator Superfamily 17 355 2.6E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04430 20ed5aadc3bcf93383c3dd6e39ca48b3 402 PANTHER PTHR23513:SF11 16 399 5.7E-51 T 22-04-2016 LMES_RS04430 20ed5aadc3bcf93383c3dd6e39ca48b3 402 SUPERFAMILY SSF103473 5 396 6.67E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04430 20ed5aadc3bcf93383c3dd6e39ca48b3 402 PANTHER PTHR23513 16 399 5.7E-51 T 22-04-2016 LMES_RS04430 20ed5aadc3bcf93383c3dd6e39ca48b3 402 Gene3D G3DSA:1.20.1250.20 11 197 2.7E-20 T 22-04-2016 LMES_RS01145 cb264f8f79b3061d5687c6de3582361c 224 SUPERFAMILY SSF53271 61 223 9.05E-25 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS01145 cb264f8f79b3061d5687c6de3582361c 224 PANTHER PTHR11907:SF9 26 224 8.6E-38 T 22-04-2016 LMES_RS01145 cb264f8f79b3061d5687c6de3582361c 224 PANTHER PTHR11907 26 224 8.6E-38 T 22-04-2016 LMES_RS01145 cb264f8f79b3061d5687c6de3582361c 224 Gene3D G3DSA:3.40.50.2020 71 223 3.3E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like LMES_RS01145 cb264f8f79b3061d5687c6de3582361c 224 Pfam PF00156 Phosphoribosyl transferase domain 155 223 4.7E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LMES_RS07580 2124873dff13feb92b94a4bb6eab2d44 247 PANTHER PTHR23344 1 242 6.6E-58 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LMES_RS07580 2124873dff13feb92b94a4bb6eab2d44 247 Gene3D G3DSA:3.20.20.190 2 243 2.3E-65 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LMES_RS07580 2124873dff13feb92b94a4bb6eab2d44 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 233 9.8E-38 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LMES_RS07580 2124873dff13feb92b94a4bb6eab2d44 247 SUPERFAMILY SSF51695 2 239 1.05E-66 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LMES_RS06645 2f76cd165dd24ecbb8db11b570af4ac6 113 Pfam PF11877 Protein of unknown function (DUF3397) 4 110 1.8E-8 T 22-04-2016 IPR024515 Protein of unknown function DUF3397 LMES_RS07220 e875a0c2e4a720a0f8a2b2bf0286e04d 81 PANTHER PTHR40026:SF1 1 78 2.9E-21 T 22-04-2016 IPR009366 Protein Veg GO:0042710 LMES_RS07220 e875a0c2e4a720a0f8a2b2bf0286e04d 81 Gene3D G3DSA:2.30.30.100 1 76 1.5E-30 T 22-04-2016 LMES_RS07220 e875a0c2e4a720a0f8a2b2bf0286e04d 81 PIRSF PIRSF037257 1 80 3.9E-32 T 22-04-2016 IPR009366 Protein Veg GO:0042710 LMES_RS07220 e875a0c2e4a720a0f8a2b2bf0286e04d 81 Pfam PF06257 Biofilm formation stimulator VEG 4 73 3.6E-29 T 22-04-2016 IPR009366 Protein Veg GO:0042710 LMES_RS07220 e875a0c2e4a720a0f8a2b2bf0286e04d 81 PANTHER PTHR40026 1 78 2.9E-21 T 22-04-2016 LMES_RS09180 6f0b161ddd2b0ef9b4e1ab36c1d56a47 102 PANTHER PTHR33169:SF12 1 100 2.3E-22 T 22-04-2016 LMES_RS09180 6f0b161ddd2b0ef9b4e1ab36c1d56a47 102 SUPERFAMILY SSF46785 3 101 9.58E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09180 6f0b161ddd2b0ef9b4e1ab36c1d56a47 102 PANTHER PTHR33169 1 100 2.3E-22 T 22-04-2016 LMES_RS09180 6f0b161ddd2b0ef9b4e1ab36c1d56a47 102 Gene3D G3DSA:1.10.10.10 3 101 1.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09180 6f0b161ddd2b0ef9b4e1ab36c1d56a47 102 Pfam PF03551 Transcriptional regulator PadR-like family 14 82 1.5E-19 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal LMES_RS08300 be8cba815e0c0f93c1ba9c8b88912a14 124 PIRSF PIRSF034303 1 124 3.0E-31 T 22-04-2016 IPR012543 Protein of unknown function DUF1694 LMES_RS08300 be8cba815e0c0f93c1ba9c8b88912a14 124 Gene3D G3DSA:3.30.1330.30 2 123 8.0E-39 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS08300 be8cba815e0c0f93c1ba9c8b88912a14 124 SUPERFAMILY SSF160515 2 123 3.79E-31 T 22-04-2016 LMES_RS08300 be8cba815e0c0f93c1ba9c8b88912a14 124 Pfam PF07997 Protein of unknown function (DUF1694) 2 122 3.6E-36 T 22-04-2016 IPR012543 Protein of unknown function DUF1694 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 PANTHER PTHR33692:SF1 1 173 4.8E-53 T 22-04-2016 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 Pfam PF01782 RimM N-terminal domain 10 89 2.4E-21 T 22-04-2016 IPR002676 RimM protein GO:0006364 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 Gene3D G3DSA:2.40.30.60 2 95 7.0E-18 T 22-04-2016 IPR002676 RimM protein GO:0006364 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 Pfam PF05239 PRC-barrel domain 99 171 1.7E-9 T 22-04-2016 IPR027275 PRC-barrel domain LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 Gene3D G3DSA:2.30.30.240 101 171 6.3E-23 T 22-04-2016 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 SUPERFAMILY SSF50447 6 95 4.59E-20 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 171 23.703 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 170 8.3E-48 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 PANTHER PTHR33692 1 173 4.8E-53 T 22-04-2016 LMES_RS06530 ea70e6920c8346124f24ae4fb21acd01 173 SUPERFAMILY SSF50346 101 171 5.49E-19 T 22-04-2016 IPR011033 PRC-barrel-like LMES_RS01380 79585a0498d70b4a7a93230f6ab7bcc7 318 PANTHER PTHR12304 1 269 3.5E-70 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LMES_RS01380 79585a0498d70b4a7a93230f6ab7bcc7 318 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 306 3.4E-66 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS01380 79585a0498d70b4a7a93230f6ab7bcc7 318 Gene3D G3DSA:3.90.245.10 2 313 3.5E-90 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS01380 79585a0498d70b4a7a93230f6ab7bcc7 318 PANTHER PTHR12304:SF4 1 269 3.5E-70 T 22-04-2016 LMES_RS01380 79585a0498d70b4a7a93230f6ab7bcc7 318 SUPERFAMILY SSF53590 1 313 1.57E-80 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 PANTHER PTHR11911:SF6 196 350 2.4E-92 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 PANTHER PTHR11911:SF6 102 178 2.4E-92 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 PANTHER PTHR11911 196 350 2.4E-92 T 22-04-2016 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 PANTHER PTHR11911 102 178 2.4E-92 T 22-04-2016 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 191 203 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 SUPERFAMILY SSF51412 9 353 4.06E-114 T 22-04-2016 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 14 359 1.8E-131 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 SMART SM01240 13 363 2.6E-181 T 22-04-2016 LMES_RS03100 21b487c4cbbddfb8d5bfc9e017d03638 380 Gene3D G3DSA:3.20.20.70 13 357 8.8E-115 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS00415 4db9b477ae27bbb53901cf0a06b8e8f4 59 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 10 49 1.7E-6 T 22-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 LMES_RS00415 4db9b477ae27bbb53901cf0a06b8e8f4 59 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 12 51 3.5E-13 T 22-04-2016 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 PANTHER PTHR20857:SF15 1 210 1.1E-65 T 22-04-2016 LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 Gene3D G3DSA:3.20.20.70 6 210 4.3E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 PANTHER PTHR20857 1 210 1.1E-65 T 22-04-2016 LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 Pfam PF02581 Thiamine monophosphate synthase/TENI 11 191 9.6E-60 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 SUPERFAMILY SSF51391 7 207 2.49E-58 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 201 2.7E-65 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS05075 c1628282f8040bf5dda0dfe9f6ea978e 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 209 25.571 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 PIRSF PIRSF006230 1 282 1.6E-91 T 22-04-2016 IPR016478 GTPase, MTG1 LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 Gene3D G3DSA:3.40.50.300 19 179 1.8E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 SUPERFAMILY SSF52540 11 221 1.22E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 Pfam PF01926 50S ribosome-binding GTPase 125 223 8.6E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 Gene3D G3DSA:1.10.1580.10 182 271 3.4E-24 T 22-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 PANTHER PTHR11089 5 277 4.1E-66 T 22-04-2016 LMES_RS03670 c69e7a0d422fcd9dbf4e3b1a6822653b 284 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 5 277 6.5E-98 T 22-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis LMES_RS03810 58e019fe4fcbc0878b715e250a347871 305 PANTHER PTHR34821 1 162 2.1E-26 T 22-04-2016 LMES_RS03810 58e019fe4fcbc0878b715e250a347871 305 PANTHER PTHR34821:SF2 1 162 2.1E-26 T 22-04-2016 LMES_RS03810 58e019fe4fcbc0878b715e250a347871 305 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 141 2.1E-33 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ LMES_RS03810 58e019fe4fcbc0878b715e250a347871 305 Pfam PF04657 Putative inner membrane exporter, YdcZ 168 301 1.7E-27 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 Pfam PF00270 DEAD/DEAH box helicase 30 197 1.9E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 Gene3D G3DSA:3.40.50.300 222 378 1.6E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 PANTHER PTHR24031:SF280 7 445 1.4E-177 T 22-04-2016 LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 SMART SM00490 261 342 7.8E-27 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 Pfam PF00271 Helicase conserved C-terminal domain 234 342 4.3E-23 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 SUPERFAMILY SSF52540 75 359 2.39E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 6 440 51.26 T 22-04-2016 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 Gene3D G3DSA:3.40.50.300 3 221 1.8E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 PANTHER PTHR24031 7 445 1.4E-177 T 22-04-2016 LMES_RS07080 b70d2504b3f2fcbd048ea36f7a027b8a 454 SMART SM00487 25 225 4.7E-51 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 554 46.162 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 SUPERFAMILY SSF52540 4 552 5.84E-230 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 Gene3D G3DSA:3.40.50.300 247 439 2.3E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 Gene3D G3DSA:3.40.50.300 13 127 2.3E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 Gene3D G3DSA:3.10.410.10 444 530 8.0E-36 T 22-04-2016 LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 Pfam PF01268 Formate--tetrahydrofolate ligase 3 554 1.3E-253 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 102 112 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 Gene3D G3DSA:3.30.1510.10 128 246 1.9E-53 T 22-04-2016 LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 327 338 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LMES_RS03370 5dc9c225b007e25f7f22e965f4ee860b 554 PANTHER PTHR10025 1 553 7.8E-303 T 22-04-2016 LMES_RS06200 262b594235d465f9a4b5926fe104ced4 323 SUPERFAMILY SSF52540 189 318 1.22E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06200 262b594235d465f9a4b5926fe104ced4 323 SUPERFAMILY SSF52540 87 136 1.22E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06200 262b594235d465f9a4b5926fe104ced4 323 Gene3D G3DSA:3.40.50.300 273 319 5.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 SUPERFAMILY SSF160240 212 290 6.54E-17 T 22-04-2016 LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 PANTHER PTHR11562:SF55 16 290 2.3E-62 T 22-04-2016 LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 Gene3D G3DSA:1.20.1510.10 16 208 3.3E-39 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 Pfam PF16916 Dimerisation domain of Zinc Transporter 214 289 1.2E-14 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 PANTHER PTHR11562 16 290 2.3E-62 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 Gene3D G3DSA:3.30.70.1350 210 290 4.2E-20 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 SUPERFAMILY SSF161111 14 210 4.84E-48 T 22-04-2016 LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 Pfam PF01545 Cation efflux family 17 208 7.3E-43 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS03375 b85ed61ee7757fdf6f35c2e07d85e268 291 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 290 3.2E-57 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 Pfam PF01205 Uncharacterized protein family UPF0029 19 122 1.5E-28 T 22-04-2016 IPR001498 Impact, N-terminal LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 Gene3D G3DSA:3.30.70.240 136 209 1.3E-13 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 Gene3D G3DSA:3.30.230.30 10 131 9.5E-44 T 22-04-2016 IPR001498 Impact, N-terminal LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 SUPERFAMILY SSF54211 2 132 1.4E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 PANTHER PTHR16301 1 205 2.7E-53 T 22-04-2016 IPR023582 Impact family LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 Pfam PF09186 Domain of unknown function (DUF1949) 140 194 4.5E-13 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 SUPERFAMILY SSF54980 136 200 2.81E-10 T 22-04-2016 IPR009022 Elongation factor G, III-V domain LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 194 2.4E-59 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal LMES_RS01135 04aabf5965adab63cd27210c6cddbc0a 211 PANTHER PTHR16301:SF0 1 205 2.7E-53 T 22-04-2016 LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 Gene3D G3DSA:3.90.870.10 4 206 8.7E-75 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 PANTHER PTHR17490:SF3 7 335 9.5E-110 T 22-04-2016 LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 Pfam PF03481 Putative GTP-binding controlling metal-binding 196 331 3.7E-21 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 PANTHER PTHR17490 7 335 9.5E-110 T 22-04-2016 LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 SUPERFAMILY SSF55821 11 205 1.28E-63 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 205 2.1E-63 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 PIRSF PIRSF004930 1 337 4.2E-116 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 LMES_RS07990 2a41a3474fe59f9c0820b94653a3eefd 337 Pfam PF01300 Telomere recombination 19 194 6.3E-55 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LMES_RS05620 2c3cd64d8c84e2087a3491892db6c541 196 PANTHER PTHR38438:SF1 5 190 1.3E-30 T 22-04-2016 LMES_RS05620 2c3cd64d8c84e2087a3491892db6c541 196 Pfam PF12822 Protein of unknown function (DUF3816) 11 183 1.2E-17 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 LMES_RS05620 2c3cd64d8c84e2087a3491892db6c541 196 PIRSF PIRSF037778 5 196 1.1E-69 T 22-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 LMES_RS05620 2c3cd64d8c84e2087a3491892db6c541 196 PANTHER PTHR38438 5 190 1.3E-30 T 22-04-2016 LMES_RS04800 9371ebe72185b228d83cdfb31f527107 169 Pfam PF03575 Peptidase family S51 34 167 1.5E-31 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 LMES_RS04800 9371ebe72185b228d83cdfb31f527107 169 Gene3D G3DSA:3.40.50.880 18 168 3.3E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04800 9371ebe72185b228d83cdfb31f527107 169 PANTHER PTHR20842 36 163 3.7E-23 T 22-04-2016 LMES_RS04800 9371ebe72185b228d83cdfb31f527107 169 SUPERFAMILY SSF52317 28 162 1.74E-15 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS05380 b19ad98df960ddf356a036f37c623df5 115 Pfam PF05534 HicB family 5 43 2.2E-10 T 22-04-2016 IPR008651 Uncharacterised protein family HicB LMES_RS05380 b19ad98df960ddf356a036f37c623df5 115 Gene3D G3DSA:1.10.1220.10 13 54 1.7E-7 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LMES_RS05380 b19ad98df960ddf356a036f37c623df5 115 SUPERFAMILY SSF47598 9 52 2.67E-9 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LMES_RS02295 45a28b856cad6f74cf09a76efed966d3 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 1.2E-53 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LMES_RS02295 45a28b856cad6f74cf09a76efed966d3 292 PANTHER PTHR11795:SF371 1 292 5.2E-132 T 22-04-2016 LMES_RS02295 45a28b856cad6f74cf09a76efed966d3 292 PANTHER PTHR11795 1 292 5.2E-132 T 22-04-2016 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 SUPERFAMILY SSF55174 3 200 1.12E-65 T 22-04-2016 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 Pfam PF01479 S4 domain 93 140 4.0E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 1.2E-78 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.463 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 SMART SM01390 3 92 6.0E-42 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 PANTHER PTHR11831:SF4 1 199 9.8E-78 T 22-04-2016 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 SMART SM00363 93 157 1.5E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 Gene3D G3DSA:3.10.290.10 97 192 2.6E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 2.5E-25 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 Gene3D G3DSA:1.10.1050.10 1 96 2.8E-37 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LMES_RS08285 5055560f35600e47ef3fdbb4a7669ecb 203 PANTHER PTHR11831 1 199 9.8E-78 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 LMES_RS02620 1ee475209d31c814ff3e906020922fe7 448 Pfam PF07690 Major Facilitator Superfamily 16 401 1.1E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS02620 1ee475209d31c814ff3e906020922fe7 448 Gene3D G3DSA:1.20.1250.20 265 431 8.8E-12 T 22-04-2016 LMES_RS02620 1ee475209d31c814ff3e906020922fe7 448 Gene3D G3DSA:1.20.1250.20 13 181 3.2E-27 T 22-04-2016 LMES_RS02620 1ee475209d31c814ff3e906020922fe7 448 PANTHER PTHR23501 1 447 1.8E-74 T 22-04-2016 LMES_RS02620 1ee475209d31c814ff3e906020922fe7 448 SUPERFAMILY SSF103473 243 441 1.02E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS02620 1ee475209d31c814ff3e906020922fe7 448 SUPERFAMILY SSF103473 10 194 1.02E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS06480 548eaf94c9e3085112a06f7c9a030199 380 PANTHER PTHR41320 20 114 2.4E-57 T 22-04-2016 LMES_RS06480 548eaf94c9e3085112a06f7c9a030199 380 PANTHER PTHR41320 131 380 2.4E-57 T 22-04-2016 LMES_RS06480 548eaf94c9e3085112a06f7c9a030199 380 Pfam PF13303 Phosphotransferase system, EIIC 33 377 2.7E-92 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 PRINTS PR00690 Adhesin family signature 77 94 8.32E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 PRINTS PR00690 Adhesin family signature 64 77 8.32E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 PRINTS PR00690 Adhesin family signature 32 50 8.32E-5 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 Gene3D G3DSA:3.40.50.1980 184 290 3.1E-12 T 22-04-2016 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 290 1.6E-42 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 PANTHER PTHR30477 1 258 4.3E-37 T 22-04-2016 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 Gene3D G3DSA:3.40.50.1980 25 177 7.1E-36 T 22-04-2016 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 PANTHER PTHR30477:SF1 1 258 4.3E-37 T 22-04-2016 LMES_RS09145 1a3aee948e8331e1dab476abfd4c41a3 293 SUPERFAMILY SSF53807 31 290 1.28E-61 T 22-04-2016 LMES_RS00600 c123a855ee36b3f61b4ef63900812a19 343 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 140 334 1.3E-17 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LMES_RS00600 c123a855ee36b3f61b4ef63900812a19 343 SUPERFAMILY SSF51726 32 336 9.55E-38 T 22-04-2016 LMES_RS00600 c123a855ee36b3f61b4ef63900812a19 343 Gene3D G3DSA:3.20.20.210 79 336 6.0E-30 T 22-04-2016 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 165 440 1.9E-111 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 PANTHER PTHR11564 130 446 1.1E-125 T 22-04-2016 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 SMART SM00962 240 441 1.5E-119 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 SUPERFAMILY SSF52540 238 440 2.34E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 SMART SM00382 239 439 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 Gene3D G3DSA:3.40.50.300 252 441 1.0E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 PANTHER PTHR11564:SF16 130 446 1.1E-125 T 22-04-2016 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 Pfam PF00448 SRP54-type protein, GTPase domain 241 440 2.1E-79 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 164 441 60.139 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 Pfam PF02881 SRP54-type protein, helical bundle domain 152 216 3.0E-10 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 SMART SM00963 140 221 1.2E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 SUPERFAMILY SSF47364 140 214 1.14E-16 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LMES_RS06980 e2f8358a7ee7bb010f8036bd3cc099df 446 Gene3D G3DSA:1.20.120.140 165 251 2.4E-24 T 22-04-2016 LMES_RS07715 86b6369a544a775ef3ab75e0cc8c2496 80 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 78 4.3E-20 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LMES_RS07715 86b6369a544a775ef3ab75e0cc8c2496 80 Pfam PF03840 Preprotein translocase SecG subunit 6 77 5.2E-19 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LMES_RS07715 86b6369a544a775ef3ab75e0cc8c2496 80 PRINTS PR01651 Protein-export SecG membrane protein signature 58 80 9.0E-10 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LMES_RS07715 86b6369a544a775ef3ab75e0cc8c2496 80 PRINTS PR01651 Protein-export SecG membrane protein signature 5 25 9.0E-10 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LMES_RS07715 86b6369a544a775ef3ab75e0cc8c2496 80 PRINTS PR01651 Protein-export SecG membrane protein signature 25 39 9.0E-10 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 1.9E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.9E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 1.9E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 Pfam PF01022 Bacterial regulatory protein, arsR family 19 63 1.6E-14 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 SUPERFAMILY SSF46785 1 93 3.55E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 Gene3D G3DSA:1.10.10.10 1 93 1.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 PANTHER PTHR33154 1 101 1.4E-23 T 22-04-2016 LMES_RS01600 966849db339429245fb150bb6a0d4ad2 114 SMART SM00418 11 89 6.0E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 SUPERFAMILY SSF64288 55 237 3.77E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 SMART SM00866 93 232 8.0E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 Gene3D G3DSA:1.10.10.10 3 61 9.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 67 1.5E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 SMART SM00345 9 67 4.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 Gene3D G3DSA:3.40.1410.10 62 236 4.3E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 Pfam PF07702 UTRA domain 95 228 2.3E-29 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 5.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 5.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 PANTHER PTHR11751 6 69 7.8E-22 T 22-04-2016 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 PANTHER PTHR11751 126 145 7.8E-22 T 22-04-2016 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 SUPERFAMILY SSF46785 3 71 1.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 PANTHER PTHR11751:SF381 6 69 7.8E-22 T 22-04-2016 LMES_RS08870 397c04a4483535d4cee71e3ae326da1e 242 PANTHER PTHR11751:SF381 126 145 7.8E-22 T 22-04-2016 LMES_RS02360 1aebbda444883510eebd3289150fd6c5 227 PANTHER PTHR31851:SF1 6 227 7.5E-36 T 22-04-2016 LMES_RS02360 1aebbda444883510eebd3289150fd6c5 227 Pfam PF01988 VIT family 17 225 2.4E-43 T 22-04-2016 IPR008217 Ccc1 family LMES_RS02360 1aebbda444883510eebd3289150fd6c5 227 PANTHER PTHR31851 6 227 7.5E-36 T 22-04-2016 LMES_RS01635 006226a55b774142097f8245e925f528 69 PANTHER PTHR38455 4 66 1.7E-27 T 22-04-2016 LMES_RS01635 006226a55b774142097f8245e925f528 69 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 61 1.0E-29 T 22-04-2016 IPR009296 Protein of unknown function DUF951 LMES_RS01635 006226a55b774142097f8245e925f528 69 PIRSF PIRSF037263 3 67 1.4E-31 T 22-04-2016 IPR009296 Protein of unknown function DUF951 LMES_RS01635 006226a55b774142097f8245e925f528 69 PANTHER PTHR38455:SF1 4 66 1.7E-27 T 22-04-2016 LMES_RS01300 40b2f0fc017c8ca565cfa22e481a7b0e 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 2.4E-38 T 22-04-2016 IPR010375 Cyclic-di-AMP receptor LMES_RS01300 40b2f0fc017c8ca565cfa22e481a7b0e 109 Gene3D G3DSA:3.30.70.120 1 106 2.4E-12 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LMES_RS01300 40b2f0fc017c8ca565cfa22e481a7b0e 109 PANTHER PTHR38456 2 109 4.0E-34 T 22-04-2016 LMES_RS01300 40b2f0fc017c8ca565cfa22e481a7b0e 109 SUPERFAMILY SSF54913 1 105 1.45E-10 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 Gene3D G3DSA:2.40.50.40 144 208 1.3E-12 T 22-04-2016 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 Pfam PF04397 LytTr DNA-binding domain 151 241 3.1E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 Pfam PF00072 Response regulator receiver domain 5 122 5.4E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 SMART SM00448 1 122 9.8E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 PANTHER PTHR26402 1 220 2.2E-27 T 22-04-2016 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 PANTHER PTHR26402:SF577 1 220 2.2E-27 T 22-04-2016 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 SUPERFAMILY SSF52172 1 130 2.42E-10 T 22-04-2016 IPR011006 CheY-like superfamily LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 SMART SM00850 148 241 4.2E-18 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LMES_RS00425 da8327285fbd12d8a72f7ffa8d78bb02 241 Gene3D G3DSA:3.40.50.2300 1 133 1.7E-13 T 22-04-2016 LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 PANTHER PTHR24220 5 216 2.6E-85 T 22-04-2016 LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 SUPERFAMILY SSF52540 3 222 6.39E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 PANTHER PTHR24220:SF453 5 216 2.6E-85 T 22-04-2016 LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 Gene3D G3DSA:3.40.50.300 3 228 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 Pfam PF00005 ABC transporter 20 160 2.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 SMART SM00382 28 208 6.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS00260 d4686e34595ea4b0ba6329e82209ebd5 301 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS01220 2e531588be4619d7043550e2085b0114 334 PANTHER PTHR41292 57 313 1.5E-22 T 22-04-2016 LMES_RS01220 2e531588be4619d7043550e2085b0114 334 PANTHER PTHR41292:SF1 57 313 1.5E-22 T 22-04-2016 LMES_RS01220 2e531588be4619d7043550e2085b0114 334 Pfam PF10978 Protein of unknown function (DUF2785) 138 312 2.8E-52 T 22-04-2016 IPR021247 Protein of unknown function DUF2785 LMES_RS09425 d4632613830cedd4aa80328827974f97 149 SUPERFAMILY SSF53474 1 134 4.32E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS09425 d4632613830cedd4aa80328827974f97 149 Gene3D G3DSA:3.40.50.1820 1 134 2.1E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS05475 5870c50b68a1b5fc59d754fb57f72439 185 PANTHER PTHR40044 7 134 1.0E-24 T 22-04-2016 LMES_RS05475 5870c50b68a1b5fc59d754fb57f72439 185 PIRSF PIRSF031501 1 185 6.3E-58 T 22-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 LMES_RS05475 5870c50b68a1b5fc59d754fb57f72439 185 Pfam PF06177 QueT transporter 16 179 1.4E-39 T 22-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 LMES_RS05475 5870c50b68a1b5fc59d754fb57f72439 185 PANTHER PTHR40044:SF1 7 134 1.0E-24 T 22-04-2016 LMES_RS00365 95c89a4a2675797009d097425aa4c555 318 PANTHER PTHR32196 9 316 5.0E-114 T 22-04-2016 LMES_RS00365 95c89a4a2675797009d097425aa4c555 318 PANTHER PTHR32196:SF40 9 316 5.0E-114 T 22-04-2016 LMES_RS00365 95c89a4a2675797009d097425aa4c555 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 297 3.7E-39 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LMES_RS06350 8aabc3f6242a5fd2f45f21cec4546f1b 216 Pfam PF07099 Protein of unknown function (DUF1361) 35 193 3.2E-39 T 22-04-2016 IPR009793 Protein of unknown function DUF1361 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 Gene3D G3DSA:3.50.50.60 2 124 9.4E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 Gene3D G3DSA:3.50.50.60 247 316 9.4E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PANTHER PTHR22912:SF158 1 320 4.4E-93 T 22-04-2016 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 8.8E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 8.8E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 110 118 8.8E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.8E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 8.8E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 SUPERFAMILY SSF51905 1 315 2.33E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 Gene3D G3DSA:3.50.50.60 125 246 2.4E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 9.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PANTHER PTHR22912 1 320 4.4E-93 T 22-04-2016 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.3E-19 T 22-04-2016 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.3E-19 T 22-04-2016 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.3E-19 T 22-04-2016 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 109 127 1.3E-19 T 22-04-2016 LMES_RS01385 9949aeb2bea84e9efb0e44c8a7345125 336 Hamap MF_01685 Ferredoxin--NADP reductase. 4 328 37.377 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 LMES_RS00645 2eee702cd1b28e28045b1d88992ffeab 275 PANTHER PTHR20858 6 266 1.3E-81 T 22-04-2016 LMES_RS00645 2eee702cd1b28e28045b1d88992ffeab 275 Pfam PF08543 Phosphomethylpyrimidine kinase 15 262 2.0E-76 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LMES_RS00645 2eee702cd1b28e28045b1d88992ffeab 275 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 264 9.2E-82 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 LMES_RS00645 2eee702cd1b28e28045b1d88992ffeab 275 Gene3D G3DSA:3.40.1190.20 6 265 6.4E-85 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS00645 2eee702cd1b28e28045b1d88992ffeab 275 SUPERFAMILY SSF53613 6 266 1.14E-67 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS00645 2eee702cd1b28e28045b1d88992ffeab 275 PANTHER PTHR20858:SF17 6 266 1.3E-81 T 22-04-2016 LMES_RS06680 99681815c2a7eb5288078abdc2281ae0 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 201 1.1E-77 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LMES_RS06680 99681815c2a7eb5288078abdc2281ae0 218 Gene3D G3DSA:3.20.20.70 4 215 1.0E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS06680 99681815c2a7eb5288078abdc2281ae0 218 SUPERFAMILY SSF51366 4 218 9.42E-71 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LMES_RS06680 99681815c2a7eb5288078abdc2281ae0 218 PIRSF PIRSF001461 1 218 2.2E-86 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LMES_RS06680 99681815c2a7eb5288078abdc2281ae0 218 PANTHER PTHR11749 1 218 4.2E-109 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LMES_RS06680 99681815c2a7eb5288078abdc2281ae0 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 213 3.2E-83 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LMES_RS02760 86ef79e518329953381a2ffcdb69c08f 175 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 14 166 2.6E-10 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LMES_RS02760 86ef79e518329953381a2ffcdb69c08f 175 Pfam PF04093 rod shape-determining protein MreD 11 173 7.4E-10 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LMES_RS09410 228782b87e774e4276c0dcd58dba01c0 297 PANTHER PTHR31752:SF7 78 297 2.2E-38 T 22-04-2016 LMES_RS09410 228782b87e774e4276c0dcd58dba01c0 297 PANTHER PTHR31752 78 297 2.2E-38 T 22-04-2016 LMES_RS09410 228782b87e774e4276c0dcd58dba01c0 297 Pfam PF03547 Membrane transport protein 1 139 9.1E-15 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 LMES_RS09410 228782b87e774e4276c0dcd58dba01c0 297 Pfam PF03547 Membrane transport protein 149 291 1.9E-17 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 LMES_RS07315 cc51ec3681603aee7ee564295a126465 1445 Gene3D G3DSA:2.60.120.260 377 497 1.4E-11 T 22-04-2016 IPR008979 Galactose-binding domain-like LMES_RS07315 cc51ec3681603aee7ee564295a126465 1445 Gene3D G3DSA:2.60.120.260 652 825 1.3E-4 T 22-04-2016 IPR008979 Galactose-binding domain-like LMES_RS07315 cc51ec3681603aee7ee564295a126465 1445 SUPERFAMILY SSF49785 377 497 8.16E-9 T 22-04-2016 IPR008979 Galactose-binding domain-like LMES_RS02365 92b52643e505dad39bfebdcc0f864b4b 286 Pfam PF03631 Virulence factor BrkB 36 271 3.9E-32 T 22-04-2016 IPR017039 Virulence factor BrkB LMES_RS02365 92b52643e505dad39bfebdcc0f864b4b 286 PANTHER PTHR30213 25 276 1.5E-18 T 22-04-2016 LMES_RS02365 92b52643e505dad39bfebdcc0f864b4b 286 PIRSF PIRSF035875 2 282 3.8E-33 T 22-04-2016 IPR017039 Virulence factor BrkB LMES_RS06490 3bec3d5febe67369ebe77959613fd496 234 Gene3D G3DSA:3.40.50.150 94 166 3.9E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06490 3bec3d5febe67369ebe77959613fd496 234 SUPERFAMILY SSF53335 82 170 6.25E-9 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 Pfam PF00255 Glutathione peroxidase 3 109 1.9E-31 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 SUPERFAMILY SSF52833 1 157 1.29E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 22-04-2016 IPR029759 Glutathione peroxidase active site LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 PIRSF PIRSF000303 1 157 1.9E-59 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 Gene3D G3DSA:3.40.30.10 1 157 1.1E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.3E-9 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.3E-9 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 PRINTS PR01011 Glutathione peroxidase family signature 121 130 1.3E-9 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LMES_RS00035 9c3bbc9c7dd6f989df75097778e5be69 157 PANTHER PTHR11592 2 157 5.9E-71 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LMES_RS05280 5587df664750bacfc082b6c38e4a6145 90 PANTHER PTHR34477 1 82 4.4E-25 T 22-04-2016 LMES_RS05280 5587df664750bacfc082b6c38e4a6145 90 SUPERFAMILY SSF82771 3 75 1.06E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LMES_RS05280 5587df664750bacfc082b6c38e4a6145 90 Pfam PF01541 GIY-YIG catalytic domain 3 76 1.5E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily LMES_RS02450 4599bfb973ede708fd8173e35731d8e5 148 PANTHER PTHR41323 1 145 7.5E-23 T 22-04-2016 LMES_RS02450 4599bfb973ede708fd8173e35731d8e5 148 Gene3D G3DSA:2.40.128.20 2 144 9.9E-41 T 22-04-2016 IPR012674 Calycin LMES_RS02450 4599bfb973ede708fd8173e35731d8e5 148 Pfam PF09148 Domain of unknown function (DUF1934) 11 138 4.8E-30 T 22-04-2016 IPR015231 Protein of unknown function DUF1934 LMES_RS02450 4599bfb973ede708fd8173e35731d8e5 148 SUPERFAMILY SSF50814 4 140 4.15E-34 T 22-04-2016 IPR011038 Calycin-like LMES_RS02355 019f746c9b1c65730932cf6cfe7adf1b 225 Pfam PF01988 VIT family 14 221 9.7E-47 T 22-04-2016 IPR008217 Ccc1 family LMES_RS02355 019f746c9b1c65730932cf6cfe7adf1b 225 PANTHER PTHR31851 7 225 3.1E-38 T 22-04-2016 LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 PANTHER PTHR30294:SF25 22 240 2.6E-68 T 22-04-2016 LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 PANTHER PTHR30294:SF25 526 721 2.6E-68 T 22-04-2016 LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 224 249 5.5E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 423 449 1.4E-4 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 203 229 2.9E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 196 222 5.2E-7 T 22-04-2016 IPR023908 xxxLxxG heptad repeat LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 8 171 3.2E-56 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 Pfam PF12051 Protein of unknown function (DUF3533) 33 176 4.2E-8 T 22-04-2016 IPR022703 Domain of unknown function DUF3533 LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 512 711 2.7E-67 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 PANTHER PTHR30294 22 240 2.6E-68 T 22-04-2016 LMES_RS08780 7a16f941287dee76d1fe6a037f6148d8 721 PANTHER PTHR30294 526 721 2.6E-68 T 22-04-2016 LMES_RS00245 4e060f4ee807e931adeeafe198f1558f 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 1.9E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS00245 4e060f4ee807e931adeeafe198f1558f 121 SMART SM00345 14 73 3.2E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LMES_RS00245 4e060f4ee807e931adeeafe198f1558f 121 Gene3D G3DSA:1.10.10.10 5 75 4.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00245 4e060f4ee807e931adeeafe198f1558f 121 PANTHER PTHR38445:SF2 1 119 3.7E-14 T 22-04-2016 LMES_RS00245 4e060f4ee807e931adeeafe198f1558f 121 SUPERFAMILY SSF46785 1 77 5.08E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00245 4e060f4ee807e931adeeafe198f1558f 121 PANTHER PTHR38445 1 119 3.7E-14 T 22-04-2016 LMES_RS09125 58c6d4f1af444723ce22c2647739b1a8 410 Gene3D G3DSA:1.20.1250.20 17 184 1.9E-17 T 22-04-2016 LMES_RS09125 58c6d4f1af444723ce22c2647739b1a8 410 Gene3D G3DSA:1.20.1250.20 223 405 5.2E-21 T 22-04-2016 LMES_RS09125 58c6d4f1af444723ce22c2647739b1a8 410 PANTHER PTHR23517 10 409 5.9E-61 T 22-04-2016 LMES_RS09125 58c6d4f1af444723ce22c2647739b1a8 410 SUPERFAMILY SSF103473 10 405 8.24E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS09125 58c6d4f1af444723ce22c2647739b1a8 410 Pfam PF07690 Major Facilitator Superfamily 17 317 2.1E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS09125 58c6d4f1af444723ce22c2647739b1a8 410 PANTHER PTHR23517:SF3 10 409 5.9E-61 T 22-04-2016 LMES_RS06365 61eb5fd66e6e9918787f78b15e66a267 210 PANTHER PTHR12598 4 207 5.5E-44 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 LMES_RS06365 61eb5fd66e6e9918787f78b15e66a267 210 Gene3D G3DSA:3.20.20.380 4 209 1.2E-55 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 LMES_RS06365 61eb5fd66e6e9918787f78b15e66a267 210 SUPERFAMILY SSF110395 4 208 8.5E-44 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 LMES_RS06365 61eb5fd66e6e9918787f78b15e66a267 210 PANTHER PTHR12598:SF0 4 207 5.5E-44 T 22-04-2016 LMES_RS06365 61eb5fd66e6e9918787f78b15e66a267 210 Pfam PF03932 CutC family 4 209 6.4E-46 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 SUPERFAMILY SSF55486 5 630 4.54E-182 T 22-04-2016 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 Pfam PF05649 Peptidase family M13 5 383 1.9E-61 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 Pfam PF01431 Peptidase family M13 437 627 9.9E-60 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 Gene3D G3DSA:3.40.390.10 428 630 1.5E-92 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 Gene3D G3DSA:3.40.390.10 267 386 1.5E-92 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 PANTHER PTHR11733:SF65 6 630 1.7E-128 T 22-04-2016 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 PANTHER PTHR11733 6 630 1.7E-128 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 538 549 1.5E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 447 459 1.5E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 468 484 1.5E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LMES_RS08695 d603b06f1e8ed896c0cd5fa64cb8fe31 630 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 429 441 1.5E-21 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 Pfam PF00480 ROK family 85 369 8.1E-24 T 22-04-2016 IPR000600 ROK family LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 PANTHER PTHR18964 62 264 7.0E-17 T 22-04-2016 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 PANTHER PTHR18964 368 380 7.0E-17 T 22-04-2016 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 Gene3D G3DSA:3.30.420.40 81 221 5.5E-26 T 22-04-2016 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 PANTHER PTHR18964:SF108 62 264 7.0E-17 T 22-04-2016 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 PANTHER PTHR18964:SF108 368 380 7.0E-17 T 22-04-2016 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 Gene3D G3DSA:1.10.10.10 9 78 6.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 Gene3D G3DSA:3.30.420.40 222 340 2.4E-24 T 22-04-2016 LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 ProSitePatterns PS01125 ROK family signature. 217 244 - T 22-04-2016 IPR000600 ROK family LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 SUPERFAMILY SSF46785 9 78 1.31E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS00575 f6aaa81f21da0cbaa70d75ee4ab22421 389 SUPERFAMILY SSF53067 82 373 5.66E-27 T 22-04-2016 LMES_RS07825 e1270fd6362b5c093b40023c0d25bc1c 70 SUPERFAMILY SSF47413 14 69 1.79E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS07825 e1270fd6362b5c093b40023c0d25bc1c 70 Gene3D G3DSA:1.10.260.40 20 68 1.7E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03915 9744718c3dbbfad9d984e62fca18a9da 181 SUPERFAMILY SSF46689 8 75 6.98E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS03915 9744718c3dbbfad9d984e62fca18a9da 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 54 2.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS03915 9744718c3dbbfad9d984e62fca18a9da 181 Gene3D G3DSA:1.10.357.10 6 174 2.7E-16 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS03915 9744718c3dbbfad9d984e62fca18a9da 181 Pfam PF14278 Transcriptional regulator C-terminal region 88 160 9.3E-13 T 22-04-2016 LMES_RS03915 9744718c3dbbfad9d984e62fca18a9da 181 PANTHER PTHR30055 1 176 2.5E-29 T 22-04-2016 LMES_RS03915 9744718c3dbbfad9d984e62fca18a9da 181 PANTHER PTHR30055:SF55 1 176 2.5E-29 T 22-04-2016 LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 12 468 3.5E-140 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 Pfam PF03796 DnaB-like helicase C terminal domain 190 466 3.0E-91 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 Gene3D G3DSA:3.40.50.300 177 469 2.5E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 SUPERFAMILY SSF52540 190 459 1.06E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 PANTHER PTHR30153 1 477 2.6E-149 T 22-04-2016 LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 Pfam PF00772 DnaB-like helicase N terminal domain 12 116 1.7E-31 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 Gene3D G3DSA:1.10.860.10 13 117 3.3E-31 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LMES_RS08885 88d000370d0909118d02e1a6a6fd4434 487 SUPERFAMILY SSF48024 10 124 5.49E-31 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 PANTHER PTHR31846 1 92 3.2E-23 T 22-04-2016 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 93 5.2E-26 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 Gene3D G3DSA:3.30.110.60 1 96 2.3E-29 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 87 2.0E-18 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 SMART SM01103 3 86 3.6E-37 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 85 2.2E-20 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LMES_RS07775 b767830994c5f019c0139aaac6d8d144 103 SUPERFAMILY SSF75471 1 96 1.7E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LMES_RS08620 6b1d33e00b699e18d3084b57a9b8113e 268 PANTHER PTHR13754:SF13 1 268 1.0E-72 T 22-04-2016 LMES_RS08620 6b1d33e00b699e18d3084b57a9b8113e 268 SUPERFAMILY SSF56281 13 244 1.11E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS08620 6b1d33e00b699e18d3084b57a9b8113e 268 Pfam PF00753 Metallo-beta-lactamase superfamily 21 82 7.7E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS08620 6b1d33e00b699e18d3084b57a9b8113e 268 Gene3D G3DSA:3.60.15.10 1 249 2.9E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS08620 6b1d33e00b699e18d3084b57a9b8113e 268 PANTHER PTHR13754 1 268 1.0E-72 T 22-04-2016 LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 23 286 7.1E-81 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 22 289 52.271 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 54 81 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 PANTHER PTHR11727 12 292 1.3E-83 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 SUPERFAMILY SSF53335 20 290 6.53E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 Gene3D G3DSA:1.10.8.100 219 289 2.4E-16 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 SMART SM00650 38 214 1.2E-74 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 Pfam PF00398 Ribosomal RNA adenine dimethylase 23 287 1.2E-62 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LMES_RS07225 0e80ffa237a25a91fe2711ddfcad680e 295 Gene3D G3DSA:3.40.50.150 8 215 1.2E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS01360 c53c1f4c9ac442ba6440707dd2ddf3d8 257 PANTHER PTHR34385 10 257 1.6E-44 T 22-04-2016 LMES_RS01360 c53c1f4c9ac442ba6440707dd2ddf3d8 257 SUPERFAMILY SSF55166 84 239 6.54E-28 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain LMES_RS01360 c53c1f4c9ac442ba6440707dd2ddf3d8 257 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 89 231 5.4E-35 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 LMES_RS01360 c53c1f4c9ac442ba6440707dd2ddf3d8 257 Gene3D G3DSA:3.30.1380.10 71 174 7.4E-8 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain LMES_RS01360 c53c1f4c9ac442ba6440707dd2ddf3d8 257 PANTHER PTHR34385:SF1 10 257 1.6E-44 T 22-04-2016 LMES_RS07670 c2a13514e5f608df72713a78c2f0ad04 173 Pfam PF02674 Colicin V production protein 7 155 8.2E-20 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 LMES_RS02110 44400ea6913c28d006427b6c1ff53231 131 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 95 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LMES_RS02110 44400ea6913c28d006427b6c1ff53231 131 PANTHER PTHR11644 1 127 3.9E-55 T 22-04-2016 LMES_RS02110 44400ea6913c28d006427b6c1ff53231 131 SUPERFAMILY SSF53927 6 128 7.36E-44 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LMES_RS02110 44400ea6913c28d006427b6c1ff53231 131 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 7 129 4.9E-42 T 22-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 LMES_RS02110 44400ea6913c28d006427b6c1ff53231 131 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 98 3.3E-13 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LMES_RS02110 44400ea6913c28d006427b6c1ff53231 131 Gene3D G3DSA:3.40.140.10 6 128 1.6E-45 T 22-04-2016 LMES_RS01630 d242f654fce700def7abfce347d1d511 299 Gene3D G3DSA:1.10.260.40 148 175 4.0E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS01630 d242f654fce700def7abfce347d1d511 299 Gene3D G3DSA:3.90.1530.10 35 137 2.2E-37 T 22-04-2016 LMES_RS01630 d242f654fce700def7abfce347d1d511 299 SUPERFAMILY SSF109709 125 235 6.8E-33 T 22-04-2016 LMES_RS01630 d242f654fce700def7abfce347d1d511 299 Pfam PF02195 ParB-like nuclease domain 44 131 2.5E-25 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LMES_RS01630 d242f654fce700def7abfce347d1d511 299 PANTHER PTHR33375:SF3 7 299 1.2E-103 T 22-04-2016 LMES_RS01630 d242f654fce700def7abfce347d1d511 299 SMART SM00470 43 132 6.9E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LMES_RS01630 d242f654fce700def7abfce347d1d511 299 SUPERFAMILY SSF110849 43 134 3.49E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin LMES_RS01630 d242f654fce700def7abfce347d1d511 299 PANTHER PTHR33375 7 299 1.2E-103 T 22-04-2016 LMES_RS01630 d242f654fce700def7abfce347d1d511 299 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 40 216 3.2E-58 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 LMES_RS01710 d2fb092cd4885b14066e8a09d136dc64 68 SUPERFAMILY SSF47413 2 65 9.92E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS01710 d2fb092cd4885b14066e8a09d136dc64 68 SMART SM00530 4 59 4.1E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS01710 d2fb092cd4885b14066e8a09d136dc64 68 PANTHER PTHR10245:SF26 1 64 4.9E-21 T 22-04-2016 LMES_RS01710 d2fb092cd4885b14066e8a09d136dc64 68 Pfam PF01381 Helix-turn-helix 5 58 3.6E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS01710 d2fb092cd4885b14066e8a09d136dc64 68 Gene3D G3DSA:1.10.260.40 3 63 8.1E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS01710 d2fb092cd4885b14066e8a09d136dc64 68 PANTHER PTHR10245 1 64 4.9E-21 T 22-04-2016 LMES_RS01290 b683148ab767bab687bfdc01473712a7 86 Pfam PF10704 Protein of unknown function (DUF2508) 2 72 1.6E-20 T 22-04-2016 IPR019644 Protein of unknown function DUF2508 LMES_RS06800 ca244841720f432bc5e63b0bbbe52367 177 SUPERFAMILY SSF53098 1 169 3.34E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS06800 ca244841720f432bc5e63b0bbbe52367 177 SMART SM00479 2 167 7.9E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LMES_RS06800 ca244841720f432bc5e63b0bbbe52367 177 PANTHER PTHR30231:SF10 1 159 8.0E-49 T 22-04-2016 LMES_RS06800 ca244841720f432bc5e63b0bbbe52367 177 Pfam PF00929 Exonuclease 4 158 7.0E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LMES_RS06800 ca244841720f432bc5e63b0bbbe52367 177 PANTHER PTHR30231 1 159 8.0E-49 T 22-04-2016 LMES_RS06800 ca244841720f432bc5e63b0bbbe52367 177 Gene3D G3DSA:3.30.420.10 1 164 7.4E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS06650 63e42a64af2261a4f1b8529be2abba29 68 Pfam PF13253 Protein of unknown function (DUF4044) 31 63 9.8E-16 T 22-04-2016 IPR025270 Protein of unknown function DUF4044 LMES_RS03570 28da031ab91c12fd6661d595522f4b7d 391 SMART SM00892 47 245 1.1E-9 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 LMES_RS03570 28da031ab91c12fd6661d595522f4b7d 391 Gene3D G3DSA:3.40.10.10 339 390 4.0E-6 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LMES_RS03570 28da031ab91c12fd6661d595522f4b7d 391 Pfam PF13930 DNA/RNA non-specific endonuclease 55 196 3.2E-23 T 22-04-2016 LMES_RS03570 28da031ab91c12fd6661d595522f4b7d 391 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 250 277 1.5E-6 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA LMES_RS03570 28da031ab91c12fd6661d595522f4b7d 391 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 376 391 1.5E-6 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA LMES_RS03570 28da031ab91c12fd6661d595522f4b7d 391 SUPERFAMILY SSF57884 344 390 1.05E-7 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LMES_RS06935 48e62c84aab6c37887080b9bb8b41494 368 Pfam PF00990 Diguanylate cyclase, GGDEF domain 208 362 1.1E-22 T 22-04-2016 IPR000160 GGDEF domain LMES_RS06935 48e62c84aab6c37887080b9bb8b41494 368 SUPERFAMILY SSF55073 212 366 1.02E-25 T 22-04-2016 IPR029787 Nucleotide cyclase LMES_RS06935 48e62c84aab6c37887080b9bb8b41494 368 Gene3D G3DSA:3.30.70.270 209 366 2.3E-26 T 22-04-2016 LMES_RS06935 48e62c84aab6c37887080b9bb8b41494 368 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 203 366 2.0E-27 T 22-04-2016 IPR000160 GGDEF domain LMES_RS06935 48e62c84aab6c37887080b9bb8b41494 368 SMART SM00267 196 367 2.8E-20 T 22-04-2016 IPR000160 GGDEF domain LMES_RS02235 8921187474784461d02e3880eefc9c5b 329 Pfam PF02384 N-6 DNA Methylase 99 309 1.1E-9 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 LMES_RS02235 8921187474784461d02e3880eefc9c5b 329 Gene3D G3DSA:3.40.50.150 108 305 1.9E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS02235 8921187474784461d02e3880eefc9c5b 329 SUPERFAMILY SSF53335 28 317 2.72E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS02235 8921187474784461d02e3880eefc9c5b 329 PANTHER PTHR41313 2 327 1.4E-55 T 22-04-2016 LMES_RS06145 2a8ae44c53c813e608c47eec684380a4 481 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 329 466 1.2E-25 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LMES_RS06145 2a8ae44c53c813e608c47eec684380a4 481 PANTHER PTHR30250 1 470 1.8E-34 T 22-04-2016 LMES_RS06145 2a8ae44c53c813e608c47eec684380a4 481 Pfam PF01943 Polysaccharide biosynthesis protein 4 274 7.4E-26 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LMES_RS09350 8aeb2fed04212e473c48e4adc5eadbe8 307 SUPERFAMILY SSF144083 241 300 1.44E-13 T 22-04-2016 LMES_RS09350 8aeb2fed04212e473c48e4adc5eadbe8 307 Pfam PF01544 CorA-like Mg2+ transporter protein 9 301 1.2E-60 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LMES_RS09350 8aeb2fed04212e473c48e4adc5eadbe8 307 SUPERFAMILY SSF143865 10 236 3.4E-23 T 22-04-2016 LMES_RS09350 8aeb2fed04212e473c48e4adc5eadbe8 307 Gene3D G3DSA:1.20.58.340 230 301 4.0E-14 T 22-04-2016 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.0E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.0E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.0E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 Gene3D G3DSA:1.10.1660.10 3 60 6.2E-24 T 22-04-2016 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 PANTHER PTHR30204:SF18 7 112 1.2E-24 T 22-04-2016 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 SMART SM00422 4 73 3.5E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 SUPERFAMILY SSF46955 5 116 2.56E-28 T 22-04-2016 IPR009061 Putative DNA-binding domain LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 Gene3D G3DSA:1.10.1660.10 61 112 1.4E-10 T 22-04-2016 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 Pfam PF13411 MerR HTH family regulatory protein 7 71 1.4E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LMES_RS04100 4e86b5dff419499cfbb839619e701a6d 125 PANTHER PTHR30204 7 112 1.2E-24 T 22-04-2016 LMES_RS05670 9eaf0e2f908fc09c5dfabe7b0653dcf8 509 Pfam PF13556 PucR C-terminal helix-turn-helix domain 449 506 3.5E-18 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain LMES_RS05670 9eaf0e2f908fc09c5dfabe7b0653dcf8 509 PANTHER PTHR33744 1 509 1.6E-27 T 22-04-2016 LMES_RS05670 9eaf0e2f908fc09c5dfabe7b0653dcf8 509 Gene3D G3DSA:1.10.10.60 454 485 4.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS05670 9eaf0e2f908fc09c5dfabe7b0653dcf8 509 Pfam PF07905 Purine catabolism regulatory protein-like family 4 116 2.5E-22 T 22-04-2016 IPR012914 Purine catabolism PurC-like domain LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 SUPERFAMILY SSF52540 1 220 3.96E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 PANTHER PTHR11059 2 551 6.2E-150 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 Pfam PF13476 AAA domain 5 205 1.7E-8 T 22-04-2016 LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 Gene3D G3DSA:3.40.50.300 1 209 4.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 PIRSF PIRSF003128 1 554 4.5E-169 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 SUPERFAMILY SSF52540 3 50 7.11E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 SUPERFAMILY SSF52540 299 507 7.11E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 Gene3D G3DSA:3.40.50.300 432 506 4.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS07155 7c4547b7a8473df46f361bded5354269 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 5.7E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LMES_RS04395 2ea8af9e8e84f49b1a820db7659c5b5b 388 PANTHER PTHR24064 5 387 1.4E-75 T 22-04-2016 LMES_RS04395 2ea8af9e8e84f49b1a820db7659c5b5b 388 Pfam PF07690 Major Facilitator Superfamily 16 249 1.8E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04395 2ea8af9e8e84f49b1a820db7659c5b5b 388 SUPERFAMILY SSF103473 4 381 1.44E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04395 2ea8af9e8e84f49b1a820db7659c5b5b 388 Gene3D G3DSA:1.20.1250.20 203 382 4.2E-27 T 22-04-2016 LMES_RS04395 2ea8af9e8e84f49b1a820db7659c5b5b 388 Gene3D G3DSA:1.20.1250.20 4 191 1.5E-32 T 22-04-2016 LMES_RS04395 2ea8af9e8e84f49b1a820db7659c5b5b 388 PANTHER PTHR24064:SF168 5 387 1.4E-75 T 22-04-2016 LMES_RS00385 e990142cbfbc2e8578e7d1cd1f4214a8 334 Gene3D G3DSA:3.40.50.2300 37 164 1.5E-49 T 22-04-2016 LMES_RS00385 e990142cbfbc2e8578e7d1cd1f4214a8 334 Pfam PF04392 ABC transporter substrate binding protein 38 327 1.9E-83 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein LMES_RS00385 e990142cbfbc2e8578e7d1cd1f4214a8 334 SUPERFAMILY SSF53822 39 258 4.71E-14 T 22-04-2016 IPR028082 Periplasmic binding protein-like I LMES_RS00385 e990142cbfbc2e8578e7d1cd1f4214a8 334 PANTHER PTHR35271 1 331 6.7E-53 T 22-04-2016 LMES_RS00385 e990142cbfbc2e8578e7d1cd1f4214a8 334 Gene3D G3DSA:3.40.50.2300 165 297 1.1E-47 T 22-04-2016 LMES_RS06750 6e5b3414ced52b67ffccf7940fe63b57 305 Gene3D G3DSA:1.10.443.10 110 295 2.9E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS06750 6e5b3414ced52b67ffccf7940fe63b57 305 Pfam PF00589 Phage integrase family 112 286 5.2E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LMES_RS06750 6e5b3414ced52b67ffccf7940fe63b57 305 SUPERFAMILY SSF56349 6 291 3.83E-48 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LMES_RS06750 6e5b3414ced52b67ffccf7940fe63b57 305 Gene3D G3DSA:1.10.150.130 5 100 1.1E-18 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal LMES_RS06750 6e5b3414ced52b67ffccf7940fe63b57 305 PANTHER PTHR30349 5 288 8.7E-29 T 22-04-2016 LMES_RS06750 6e5b3414ced52b67ffccf7940fe63b57 305 PANTHER PTHR30349:SF20 5 288 8.7E-29 T 22-04-2016 LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 SUPERFAMILY SSF55282 5 179 1.15E-74 T 22-04-2016 IPR022803 Ribosomal protein L5 domain LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 PANTHER PTHR11994 5 179 6.5E-86 T 22-04-2016 LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 PIRSF PIRSF002161 1 180 3.1E-64 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 Pfam PF00281 Ribosomal protein L5 26 81 4.6E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 Gene3D G3DSA:3.30.1440.10 4 179 3.7E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.619 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00960 ad60206c23516e8b738fa1068db1ca49 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 1.4E-39 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 81 94 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 118 131 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 107 115 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 208 221 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 283 297 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 389 402 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 333 344 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 194 207 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PRINTS PR00415 Aconitase family signature 132 147 7.2E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 SUPERFAMILY SSF53732 1 455 1.57E-154 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 456 53.787 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 ProSitePatterns PS01244 Aconitase family signature 2. 389 402 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 Pfam PF00330 Aconitase family (aconitate hydratase) 7 447 1.3E-144 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 Gene3D G3DSA:3.30.499.10 300 454 5.4E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 Gene3D G3DSA:3.40.1060.10 165 278 3.0E-35 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PANTHER PTHR11670:SF12 1 452 1.1E-216 T 22-04-2016 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 ProSitePatterns PS00450 Aconitase family signature 1. 329 345 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 Gene3D G3DSA:3.30.499.10 2 163 1.3E-22 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 PANTHER PTHR11670 1 452 1.1E-216 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS09200 73e2cdab0ce7f839d83b1ae189da9cd2 458 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 453 2.3E-198 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LMES_RS02585 79a846ae5bef5ea67f1f83e6243b1a12 150 PANTHER PTHR41243 2 149 9.8E-51 T 22-04-2016 LMES_RS02585 79a846ae5bef5ea67f1f83e6243b1a12 150 Pfam PF10263 SprT-like family 8 142 2.0E-15 T 22-04-2016 IPR006640 SprT-like LMES_RS02585 79a846ae5bef5ea67f1f83e6243b1a12 150 PANTHER PTHR41243:SF1 2 149 9.8E-51 T 22-04-2016 LMES_RS02585 79a846ae5bef5ea67f1f83e6243b1a12 150 SMART SM00731 4 144 2.9E-36 T 22-04-2016 IPR006640 SprT-like LMES_RS04780 79b3cc730d4db4729953249961595a8e 170 Pfam PF07301 Protein of unknown function (DUF1453) 35 145 1.6E-7 T 22-04-2016 IPR009916 Protein of unknown function DUF1453 LMES_RS09405 e1a52bc34f4ab3fed04757c6b3abcfe7 616 Pfam PF13454 FAD-NAD(P)-binding 4 183 1.2E-41 T 22-04-2016 LMES_RS09405 e1a52bc34f4ab3fed04757c6b3abcfe7 616 Gene3D G3DSA:3.50.50.60 1 204 7.4E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS09405 e1a52bc34f4ab3fed04757c6b3abcfe7 616 SUPERFAMILY SSF51905 1 238 9.07E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 33 461 34.641 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 40 428 1.1E-102 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PRINTS PR00447 Natural resistance-associated macrophage protein signature 233 256 1.5E-47 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PRINTS PR00447 Natural resistance-associated macrophage protein signature 149 168 1.5E-47 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PRINTS PR00447 Natural resistance-associated macrophage protein signature 121 147 1.5E-47 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PRINTS PR00447 Natural resistance-associated macrophage protein signature 404 423 1.5E-47 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PRINTS PR00447 Natural resistance-associated macrophage protein signature 342 361 1.5E-47 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PRINTS PR00447 Natural resistance-associated macrophage protein signature 370 387 1.5E-47 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PANTHER PTHR11706:SF33 15 464 4.1E-165 T 22-04-2016 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 Pfam PF01566 Natural resistance-associated macrophage protein 62 430 2.2E-111 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS01590 96d8a7078cb5631708a407767d8135c0 464 PANTHER PTHR11706 15 464 4.1E-165 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LMES_RS03105 82867879bb6ba89970c0d3772bca7128 328 Gene3D G3DSA:3.20.20.70 8 325 6.5E-61 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS03105 82867879bb6ba89970c0d3772bca7128 328 SMART SM01240 8 314 1.1E-56 T 22-04-2016 LMES_RS03105 82867879bb6ba89970c0d3772bca7128 328 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 267 314 5.7E-10 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 LMES_RS03105 82867879bb6ba89970c0d3772bca7128 328 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 260 2.0E-45 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 LMES_RS03105 82867879bb6ba89970c0d3772bca7128 328 SUPERFAMILY SSF51412 8 325 4.73E-60 T 22-04-2016 LMES_RS07475 53c82eeeb9d87fe01103b1552247f635 299 Pfam PF07083 Protein of unknown function (DUF1351) 16 216 2.2E-31 T 22-04-2016 IPR009785 Lactobacillus prophage Lj928, Orf309 LMES_RS06370 a2fbe0f24a63140cbe7763246087c065 213 Gene3D G3DSA:3.40.50.720 2 156 1.7E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06370 a2fbe0f24a63140cbe7763246087c065 213 SUPERFAMILY SSF51735 1 178 2.57E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06370 a2fbe0f24a63140cbe7763246087c065 213 PANTHER PTHR12126:SF1 2 169 1.2E-23 T 22-04-2016 LMES_RS06370 a2fbe0f24a63140cbe7763246087c065 213 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 116 9.3E-10 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LMES_RS06370 a2fbe0f24a63140cbe7763246087c065 213 PANTHER PTHR12126 2 169 1.2E-23 T 22-04-2016 LMES_RS06865 651aa57af4bc95cc1961daa65293fb7d 174 Gene3D G3DSA:2.30.30.330 4 172 4.8E-34 T 22-04-2016 LMES_RS06865 651aa57af4bc95cc1961daa65293fb7d 174 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 5 169 9.0E-23 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LMES_RS06865 651aa57af4bc95cc1961daa65293fb7d 174 SUPERFAMILY SSF54001 4 170 3.92E-28 T 22-04-2016 LMES_RS07690 32cfcf2612c310c29fd3b3ed8de446e4 176 SUPERFAMILY SSF58113 54 130 8.24E-5 T 22-04-2016 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 SUPERFAMILY SSF53790 13 231 3.4E-80 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 14 233 36.507 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 214 1.1E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 Gene3D G3DSA:3.40.1010.10 13 122 2.4E-11 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 92 103 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 PANTHER PTHR21091:SF18 6 243 4.0E-91 T 22-04-2016 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 PANTHER PTHR21091 6 243 4.0E-91 T 22-04-2016 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 Gene3D G3DSA:3.30.950.10 123 233 1.4E-42 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 15 287 9.2E-87 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS01310 fe6798fdfe079010e86e6fb6c8b15523 289 PIRSF PIRSF005917 2 289 6.9E-101 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS07805 0210e5becf3f0e137efccfe7c2243e00 201 PANTHER PTHR23026:SF89 3 201 1.8E-72 T 22-04-2016 LMES_RS07805 0210e5becf3f0e137efccfe7c2243e00 201 SUPERFAMILY SSF55469 5 200 2.88E-63 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LMES_RS07805 0210e5becf3f0e137efccfe7c2243e00 201 Gene3D G3DSA:3.40.109.10 5 201 2.7E-62 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 LMES_RS07805 0210e5becf3f0e137efccfe7c2243e00 201 Pfam PF00881 Nitroreductase family 10 179 9.8E-13 T 22-04-2016 IPR029479 Nitroreductase LMES_RS07805 0210e5becf3f0e137efccfe7c2243e00 201 PANTHER PTHR23026 3 201 1.8E-72 T 22-04-2016 LMES_RS04300 6c6b79c6d4ceda8455024d5d79947b62 454 Pfam PF07690 Major Facilitator Superfamily 24 404 1.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04300 6c6b79c6d4ceda8455024d5d79947b62 454 PANTHER PTHR19432 9 440 3.8E-48 T 22-04-2016 LMES_RS04300 6c6b79c6d4ceda8455024d5d79947b62 454 Gene3D G3DSA:1.20.1250.20 19 226 2.6E-19 T 22-04-2016 LMES_RS04300 6c6b79c6d4ceda8455024d5d79947b62 454 Gene3D G3DSA:1.20.1250.20 253 446 8.0E-14 T 22-04-2016 LMES_RS04300 6c6b79c6d4ceda8455024d5d79947b62 454 SUPERFAMILY SSF103473 18 446 3.84E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS03240 a73b3829f672147e96920a1e75517781 68 SUPERFAMILY SSF158379 1 62 4.32E-22 T 22-04-2016 IPR023164 YqgQ-like domain LMES_RS03240 a73b3829f672147e96920a1e75517781 68 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 1.9E-26 T 22-04-2016 IPR009256 Protein of unknown function DUF910 LMES_RS03240 a73b3829f672147e96920a1e75517781 68 PANTHER PTHR41311 1 62 2.0E-12 T 22-04-2016 LMES_RS03240 a73b3829f672147e96920a1e75517781 68 Gene3D G3DSA:1.10.287.760 1 65 6.9E-28 T 22-04-2016 IPR023164 YqgQ-like domain LMES_RS04710 501e3bc041cd1e16646deedce45e6bda 348 Pfam PF01757 Acyltransferase family 6 326 9.8E-22 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 SUPERFAMILY SSF55120 2 176 8.64E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 176 7.5E-52 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 PANTHER PTHR21600:SF23 1 103 2.2E-74 T 22-04-2016 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 PANTHER PTHR21600:SF23 121 176 2.2E-74 T 22-04-2016 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 PANTHER PTHR21600 1 103 2.2E-74 T 22-04-2016 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 PANTHER PTHR21600 121 176 2.2E-74 T 22-04-2016 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 37 51 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LMES_RS01945 95fbff1a983a8957f7a0b794c2f54236 177 Pfam PF00849 RNA pseudouridylate synthase 2 147 5.3E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LMES_RS02390 6760ede1212cd7cd20da552afe680ef7 247 SUPERFAMILY SSF51658 5 246 9.2E-55 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LMES_RS02390 6760ede1212cd7cd20da552afe680ef7 247 Gene3D G3DSA:3.20.20.150 1 243 1.1E-75 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LMES_RS02390 6760ede1212cd7cd20da552afe680ef7 247 Pfam PF01261 Xylose isomerase-like TIM barrel 27 209 2.3E-7 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LMES_RS09295 b3ff22aa7eb6b863e8e9ebbd204f263e 484 PANTHER PTHR38761 1 399 1.7E-27 T 22-04-2016 LMES_RS09295 b3ff22aa7eb6b863e8e9ebbd204f263e 484 Pfam PF04262 Glutamate-cysteine ligase 7 254 1.4E-46 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LMES_RS09295 b3ff22aa7eb6b863e8e9ebbd204f263e 484 Pfam PF04262 Glutamate-cysteine ligase 260 330 2.6E-9 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LMES_RS09295 b3ff22aa7eb6b863e8e9ebbd204f263e 484 SUPERFAMILY SSF55931 8 459 2.75E-112 T 22-04-2016 LMES_RS02975 2e8a4e01b50000d21379c998345c6767 491 PANTHER PTHR30489 161 406 6.6E-24 T 22-04-2016 LMES_RS02975 2e8a4e01b50000d21379c998345c6767 491 PANTHER PTHR30489 442 491 6.6E-24 T 22-04-2016 LMES_RS02975 2e8a4e01b50000d21379c998345c6767 491 Pfam PF02687 FtsX-like permease family 320 483 1.6E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 SUPERFAMILY SSF52255 3 158 7.33E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 PANTHER PTHR23046 2 160 2.5E-78 T 22-04-2016 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 159 3.9E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 31.812 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 SMART SM01001 2 153 3.8E-99 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 Pfam PF00731 AIR carboxylase 3 151 5.6E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 PANTHER PTHR23046:SF2 2 160 2.5E-78 T 22-04-2016 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 PIRSF PIRSF001338 1 161 1.0E-71 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 LMES_RS03450 a2df9fb427a9b22cf3a51e131940dc4b 161 Gene3D G3DSA:3.40.50.7700 2 159 5.1E-71 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 312 36.092 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 Gene3D G3DSA:3.40.50.150 219 311 2.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 Gene3D G3DSA:3.40.50.150 5 111 2.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 PANTHER PTHR11265:SF0 1 312 8.4E-129 T 22-04-2016 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 Pfam PF01795 MraW methylase family 3 311 8.1E-119 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 Gene3D G3DSA:1.10.150.170 114 218 3.0E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 PANTHER PTHR11265 1 312 8.4E-129 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 311 3.3E-110 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 SUPERFAMILY SSF81799 115 216 2.75E-33 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 PIRSF PIRSF004486 1 312 9.0E-102 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 SUPERFAMILY SSF53335 216 311 6.65E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS06635 13836668e5985412acac4d9db4d07ff1 312 SUPERFAMILY SSF53335 5 114 6.65E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS01835 54b51364fc1f66692eacaf39d9d9d265 335 SUPERFAMILY SSF53756 15 330 8.37E-46 T 22-04-2016 LMES_RS01835 54b51364fc1f66692eacaf39d9d9d265 335 Gene3D G3DSA:3.40.50.2000 128 268 4.6E-10 T 22-04-2016 LMES_RS01835 54b51364fc1f66692eacaf39d9d9d265 335 Pfam PF00534 Glycosyl transferases group 1 151 309 1.0E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 LMES_RS01835 54b51364fc1f66692eacaf39d9d9d265 335 PANTHER PTHR12526 44 334 3.8E-33 T 22-04-2016 LMES_RS01835 54b51364fc1f66692eacaf39d9d9d265 335 PANTHER PTHR12526:SF394 44 334 3.8E-33 T 22-04-2016 LMES_RS01835 54b51364fc1f66692eacaf39d9d9d265 335 Pfam PF13439 Glycosyltransferase Family 4 41 140 3.9E-13 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LMES_RS04830 5342db10ccd4e80b303508cadf44c1a6 156 SUPERFAMILY SSF46785 15 149 5.36E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04830 5342db10ccd4e80b303508cadf44c1a6 156 Gene3D G3DSA:1.10.10.10 15 148 1.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04830 5342db10ccd4e80b303508cadf44c1a6 156 SMART SM00347 34 138 1.3E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04830 5342db10ccd4e80b303508cadf44c1a6 156 Pfam PF01047 MarR family 41 102 1.5E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LMES_RS04830 5342db10ccd4e80b303508cadf44c1a6 156 PANTHER PTHR33164 17 148 7.3E-18 T 22-04-2016 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 Pfam PF03466 LysR substrate binding domain 87 273 9.9E-18 T 22-04-2016 IPR005119 LysR, substrate-binding LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 PANTHER PTHR30126:SF11 1 270 8.3E-53 T 22-04-2016 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.5E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 Gene3D G3DSA:3.40.190.10 184 233 2.3E-7 T 22-04-2016 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 SUPERFAMILY SSF46785 3 111 2.25E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 Gene3D G3DSA:1.10.10.10 2 80 1.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 Gene3D G3DSA:3.40.190.10 81 183 4.8E-12 T 22-04-2016 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 SUPERFAMILY SSF53850 89 269 8.8E-17 T 22-04-2016 LMES_RS09340 0791b9c48453ad0303640e80c3bb46d0 275 PANTHER PTHR30126 1 270 8.3E-53 T 22-04-2016 LMES_RS09215 78fe182b2edd7428591f26fb5d86415e 101 SUPERFAMILY SSF117916 4 100 7.19E-29 T 22-04-2016 LMES_RS09215 78fe182b2edd7428591f26fb5d86415e 101 Pfam PF01883 Domain of unknown function DUF59 7 79 1.3E-19 T 22-04-2016 IPR002744 Domain of unknown function DUF59 LMES_RS09215 78fe182b2edd7428591f26fb5d86415e 101 PANTHER PTHR13696 9 99 2.1E-12 T 22-04-2016 LMES_RS05815 76756786d340ce90048df49eda758dd9 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.9E-27 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 LMES_RS05815 76756786d340ce90048df49eda758dd9 106 SUPERFAMILY SSF103481 4 102 2.09E-17 T 22-04-2016 LMES_RS05815 76756786d340ce90048df49eda758dd9 106 PANTHER PTHR30561:SF0 1 106 9.0E-35 T 22-04-2016 LMES_RS05815 76756786d340ce90048df49eda758dd9 106 PANTHER PTHR30561 1 106 9.0E-35 T 22-04-2016 LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 257 1.9E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 PANTHER PTHR24220:SF358 7 109 4.4E-113 T 22-04-2016 LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 PANTHER PTHR24220:SF358 125 261 4.4E-113 T 22-04-2016 LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 PANTHER PTHR24220 7 109 4.4E-113 T 22-04-2016 LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 PANTHER PTHR24220 125 261 4.4E-113 T 22-04-2016 LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 Pfam PF00005 ABC transporter 22 185 1.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 SUPERFAMILY SSF52540 4 258 6.14E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 SMART SM00382 30 234 5.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS02305 06f86f57532a706529c58d26aeb522ba 261 Gene3D G3DSA:3.40.50.300 3 255 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 PANTHER PTHR41275 2 200 2.5E-76 T 22-04-2016 LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 Pfam PF03838 Recombination protein U 34 197 4.9E-64 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 TIGRFAM TIGR00648 recU: recombination protein U 34 199 2.0E-62 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 SUPERFAMILY SSF52980 36 200 7.51E-62 T 22-04-2016 IPR011335 Restriction endonuclease type II-like LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 204 91.557 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 PIRSF PIRSF037785 25 204 5.3E-73 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LMES_RS03125 2d97146285cde06e0873afd3f8da24e3 204 Gene3D G3DSA:3.40.1350.10 35 200 1.8E-69 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 LMES_RS02370 85a179e08b4beba724ea3cafb5243319 197 SUPERFAMILY SSF142913 1 196 3.14E-65 T 22-04-2016 LMES_RS02370 85a179e08b4beba724ea3cafb5243319 197 Hamap MF_01851 UPF0637 protein . 1 195 34.604 T 22-04-2016 IPR009403 Protein of unknown function UPF0637 LMES_RS02370 85a179e08b4beba724ea3cafb5243319 197 Pfam PF06335 Protein of unknown function (DUF1054) 2 193 1.7E-63 T 22-04-2016 IPR009403 Protein of unknown function UPF0637 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 PANTHER PTHR23100:SF0 15 404 7.0E-180 T 22-04-2016 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 404 133.34 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 37 404 4.0E-113 T 22-04-2016 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 Gene3D G3DSA:3.60.70.12 15 277 1.5E-93 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 SUPERFAMILY SSF56266 19 400 2.88E-132 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 404 6.8E-140 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 Pfam PF01960 ArgJ family 24 404 1.8E-142 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LMES_RS00290 49ca69e0f881ec954d41c5a6a5a575aa 404 PANTHER PTHR23100 15 404 7.0E-180 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LMES_RS07010 9fbddff6527bee54309a1d751220ba9f 698 PANTHER PTHR10110 1 685 9.7E-132 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 LMES_RS07010 9fbddff6527bee54309a1d751220ba9f 698 PANTHER PTHR10110:SF120 1 685 9.7E-132 T 22-04-2016 LMES_RS07010 9fbddff6527bee54309a1d751220ba9f 698 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 6 539 6.1E-93 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 LMES_RS07010 9fbddff6527bee54309a1d751220ba9f 698 Pfam PF00999 Sodium/hydrogen exchanger family 7 412 8.6E-55 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LMES_RS04535 6380aab4eda583666f359b1fe920fd9b 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 97 1.8E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS04535 6380aab4eda583666f359b1fe920fd9b 101 Gene3D G3DSA:3.40.50.270 2 101 7.8E-29 T 22-04-2016 LMES_RS04535 6380aab4eda583666f359b1fe920fd9b 101 SUPERFAMILY SSF52794 4 100 2.25E-27 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LMES_RS04535 6380aab4eda583666f359b1fe920fd9b 101 PANTHER PTHR34581:SF2 4 101 1.5E-31 T 22-04-2016 LMES_RS04535 6380aab4eda583666f359b1fe920fd9b 101 PANTHER PTHR34581 4 101 1.5E-31 T 22-04-2016 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 136 1.2E-64 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 8.9E-55 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 8.9E-55 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 8.9E-55 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 8.9E-55 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 8.9E-55 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 8.9E-55 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 SUPERFAMILY SSF50249 2 136 4.88E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PIRSF PIRSF002133 1 137 5.5E-48 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 Pfam PF00164 Ribosomal protein S12/S23 2 136 8.9E-38 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 Gene3D G3DSA:2.40.50.140 1 136 3.4E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 38.571 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00855 850e0b55433abd955407806e39ffd93c 137 PANTHER PTHR11652 1 129 6.0E-70 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS02935 0f2a8d422864c773da14d373cb50dead 178 SUPERFAMILY SSF56300 1 174 1.09E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS02935 0f2a8d422864c773da14d373cb50dead 178 PANTHER PTHR11124:SF14 1 169 1.4E-35 T 22-04-2016 LMES_RS02935 0f2a8d422864c773da14d373cb50dead 178 Gene3D G3DSA:3.60.21.10 1 170 3.6E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like LMES_RS02935 0f2a8d422864c773da14d373cb50dead 178 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 3 158 4.7E-19 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 LMES_RS02935 0f2a8d422864c773da14d373cb50dead 178 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 155 7.3E-22 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type LMES_RS02935 0f2a8d422864c773da14d373cb50dead 178 PANTHER PTHR11124 1 169 1.4E-35 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 PANTHER PTHR30307:SF0 9 351 5.3E-171 T 22-04-2016 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 PANTHER PTHR30307 9 351 5.3E-171 T 22-04-2016 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 8 351 1.8E-132 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 Gene3D G3DSA:3.40.1780.10 7 68 1.4E-97 T 22-04-2016 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 Gene3D G3DSA:3.40.1780.10 188 351 1.4E-97 T 22-04-2016 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 7 352 45.242 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 Pfam PF02547 Queuosine biosynthesis protein 9 351 1.3E-135 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 SUPERFAMILY SSF111337 8 351 1.05E-134 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LMES_RS02950 e52d731725217963b3855ef8620c77a9 353 Gene3D G3DSA:2.40.10.240 70 154 5.0E-28 T 22-04-2016 LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 PANTHER PTHR24220 4 360 1.1E-69 T 22-04-2016 LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 SUPERFAMILY SSF52540 240 451 6.66E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 Pfam PF00005 ABC transporter 18 164 2.7E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 Pfam PF00005 ABC transporter 260 400 1.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 ProSitePatterns PS00211 ABC transporters family signature. 372 386 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 Gene3D G3DSA:3.40.50.300 241 451 6.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 Gene3D G3DSA:3.40.50.300 4 215 3.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 SMART SM00382 264 449 7.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 SMART SM00382 27 213 1.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03685 a9d27c00b2c100258b1a635be0daa865 457 SUPERFAMILY SSF52540 6 214 2.35E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 SUPERFAMILY SSF103473 13 444 3.53E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 PRINTS PR00171 Sugar transporter signature 24 34 2.0E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 PRINTS PR00171 Sugar transporter signature 358 379 2.0E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 PRINTS PR00171 Sugar transporter signature 268 278 2.0E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 PRINTS PR00171 Sugar transporter signature 109 128 2.0E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 PRINTS PR00171 Sugar transporter signature 381 393 2.0E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 Pfam PF00083 Sugar (and other) transporter 17 442 1.7E-84 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 PANTHER PTHR23500 19 442 7.1E-105 T 22-04-2016 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 443 4.0E-81 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 Gene3D G3DSA:1.20.1250.20 17 197 2.5E-24 T 22-04-2016 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 Gene3D G3DSA:1.20.1250.20 250 446 6.1E-12 T 22-04-2016 LMES_RS04185 757545477ee370155de04cb4853d9f3b 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS01265 3ca210515c46aeef7f31771494f07a1e 211 SUPERFAMILY SSF53335 15 201 3.62E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS01265 3ca210515c46aeef7f31771494f07a1e 211 Gene3D G3DSA:3.40.50.150 21 198 8.5E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LMES_RS01265 3ca210515c46aeef7f31771494f07a1e 211 PANTHER PTHR18895:SF72 22 205 3.7E-72 T 22-04-2016 LMES_RS01265 3ca210515c46aeef7f31771494f07a1e 211 Pfam PF05175 Methyltransferase small domain 33 201 1.1E-45 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LMES_RS01265 3ca210515c46aeef7f31771494f07a1e 211 PANTHER PTHR18895 22 205 3.7E-72 T 22-04-2016 LMES_RS03410 88dec21fbb913a3a26a57adafb0f0c99 239 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 231 8.5E-47 T 22-04-2016 LMES_RS03410 88dec21fbb913a3a26a57adafb0f0c99 239 PANTHER PTHR23291:SF42 17 232 2.3E-49 T 22-04-2016 LMES_RS03410 88dec21fbb913a3a26a57adafb0f0c99 239 PANTHER PTHR23291 17 232 2.3E-49 T 22-04-2016 IPR006214 Bax inhibitor 1-related LMES_RS01215 0e155b7cd4921284db182394e6a3069d 404 PANTHER PTHR30474 1 392 4.0E-132 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LMES_RS01215 0e155b7cd4921284db182394e6a3069d 404 PANTHER PTHR30474:SF1 1 392 4.0E-132 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 LMES_RS01215 0e155b7cd4921284db182394e6a3069d 404 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 349 373 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LMES_RS01215 0e155b7cd4921284db182394e6a3069d 404 Pfam PF01098 Cell cycle protein 20 391 2.2E-85 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 57 6.0E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 Pfam PF13091 PLD-like domain 136 247 1.6E-13 T 22-04-2016 IPR025202 Phospholipase D-like domain LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 Pfam PF13091 PLD-like domain 325 451 8.1E-26 T 22-04-2016 IPR025202 Phospholipase D-like domain LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 SMART SM00155 397 424 2.1E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 SMART SM00155 217 244 2.0E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 PANTHER PTHR21248 16 484 2.5E-183 T 22-04-2016 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 Hamap MF_01916 Cardiolipin synthase. 11 484 42.011 T 22-04-2016 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 SUPERFAMILY SSF56024 269 471 8.3E-51 T 22-04-2016 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 SUPERFAMILY SSF56024 85 315 1.44E-51 T 22-04-2016 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 7 484 2.7E-159 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 PANTHER PTHR21248:SF10 16 484 2.5E-183 T 22-04-2016 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 Gene3D G3DSA:3.30.870.10 323 481 5.4E-38 T 22-04-2016 LMES_RS02780 cf61bebc800c4c98635a9f443458c60f 484 Gene3D G3DSA:3.30.870.10 115 318 7.0E-46 T 22-04-2016 LMES_RS00085 7cd066a1546f2b9220299ec3b8ba9891 264 Gene3D G3DSA:3.60.110.10 2 264 1.8E-74 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LMES_RS00085 7cd066a1546f2b9220299ec3b8ba9891 264 Pfam PF00795 Carbon-nitrogen hydrolase 4 244 1.3E-45 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LMES_RS00085 7cd066a1546f2b9220299ec3b8ba9891 264 SUPERFAMILY SSF56317 2 264 2.35E-69 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LMES_RS00085 7cd066a1546f2b9220299ec3b8ba9891 264 PANTHER PTHR23088 2 264 6.7E-75 T 22-04-2016 LMES_RS01840 9cfe9e15322b292aab66dd2fb361cea1 345 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 9 328 1.8E-56 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LMES_RS01840 9cfe9e15322b292aab66dd2fb361cea1 345 PANTHER PTHR37693 1 334 2.4E-45 T 22-04-2016 LMES_RS01840 9cfe9e15322b292aab66dd2fb361cea1 345 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 10 337 6.7E-25 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LMES_RS01840 9cfe9e15322b292aab66dd2fb361cea1 345 PANTHER PTHR37693:SF1 1 334 2.4E-45 T 22-04-2016 LMES_RS07205 2a95dadfe0477579f5c1fc6fa9739235 263 Gene3D G3DSA:1.10.3470.10 37 261 6.8E-4 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LMES_RS07205 2a95dadfe0477579f5c1fc6fa9739235 263 PANTHER PTHR30477 1 256 3.7E-41 T 22-04-2016 LMES_RS07205 2a95dadfe0477579f5c1fc6fa9739235 263 Pfam PF00950 ABC 3 transport family 3 257 2.1E-48 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LMES_RS07205 2a95dadfe0477579f5c1fc6fa9739235 263 SUPERFAMILY SSF81345 2 257 3.92E-28 T 22-04-2016 IPR029022 ABC transporter, BtuC-like LMES_RS07205 2a95dadfe0477579f5c1fc6fa9739235 263 PANTHER PTHR30477:SF0 1 256 3.7E-41 T 22-04-2016 LMES_RS04510 10ea5c62faef4bf1cfac28159420588b 370 Pfam PF04443 Acyl-protein synthetase, LuxE 28 365 1.0E-23 T 22-04-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 LMES_RS04510 10ea5c62faef4bf1cfac28159420588b 370 SUPERFAMILY SSF56801 254 353 1.7E-6 T 22-04-2016 LMES_RS04010 bb5d9c1e59b4251bcb624fade6dece02 196 Gene3D G3DSA:3.40.50.880 1 166 7.4E-26 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS04010 bb5d9c1e59b4251bcb624fade6dece02 196 Pfam PF01965 DJ-1/PfpI family 2 163 2.8E-26 T 22-04-2016 IPR002818 DJ-1/PfpI LMES_RS04010 bb5d9c1e59b4251bcb624fade6dece02 196 SUPERFAMILY SSF52317 1 166 8.63E-29 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 Pfam PF00297 Ribosomal protein L3 99 177 9.3E-17 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 3.1E-78 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 Gene3D G3DSA:2.40.30.10 4 33 4.0E-14 T 22-04-2016 LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 Gene3D G3DSA:2.40.30.10 155 210 4.0E-14 T 22-04-2016 LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 Gene3D G3DSA:4.10.960.10 83 154 2.8E-28 T 22-04-2016 LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 36.102 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 SUPERFAMILY SSF50447 1 212 1.85E-73 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain LMES_RS00900 13335183ee4068b337318d34c0a8fce4 228 PANTHER PTHR11229 1 209 1.7E-98 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 PANTHER PTHR30055 1 194 3.2E-26 T 22-04-2016 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 PANTHER PTHR30055:SF72 1 194 3.2E-26 T 22-04-2016 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 SUPERFAMILY SSF46689 6 79 3.89E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 5.0E-17 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 Gene3D G3DSA:1.10.357.10 8 192 8.3E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS01230 4938ac2653adcc4edf2d3b91423ac25e 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 PANTHER PTHR12029 4 162 1.0E-63 T 22-04-2016 LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 SUPERFAMILY SSF75217 4 158 5.23E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 Pfam PF00588 SpoU rRNA Methylase family 4 147 1.8E-28 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 156 32.392 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 PIRSF PIRSF029256 2 159 1.4E-57 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 Gene3D G3DSA:3.40.1280.10 3 168 1.1E-58 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LMES_RS03160 fdc01afae3889967f6d536f96daa6338 170 PANTHER PTHR12029:SF31 4 162 1.0E-63 T 22-04-2016 LMES_RS07495 ca32321c54c94a4c135a8c824d957d71 272 SMART SM01040 24 106 2.1E-11 T 22-04-2016 IPR003497 BRO N-terminal domain LMES_RS07495 ca32321c54c94a4c135a8c824d957d71 272 Pfam PF03374 Phage antirepressor protein KilAC domain 156 258 2.9E-32 T 22-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 LMES_RS07495 ca32321c54c94a4c135a8c824d957d71 272 Pfam PF02498 BRO family, N-terminal domain 27 106 2.8E-13 T 22-04-2016 IPR003497 BRO N-terminal domain LMES_RS07495 ca32321c54c94a4c135a8c824d957d71 272 PANTHER PTHR36180:SF2 75 256 1.9E-19 T 22-04-2016 LMES_RS07495 ca32321c54c94a4c135a8c824d957d71 272 PANTHER PTHR36180 75 256 1.9E-19 T 22-04-2016 LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 Gene3D G3DSA:3.40.50.1820 104 156 7.5E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 Gene3D G3DSA:3.40.50.1820 205 471 7.5E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 PANTHER PTHR10272 1 454 3.7E-40 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 109 259 1.2E-10 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 302 430 2.2E-10 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 SUPERFAMILY SSF53474 133 154 1.83E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 SUPERFAMILY SSF53474 380 456 1.83E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 SUPERFAMILY SSF53474 284 347 1.83E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04110 ca36066a953959a954cfb78e53ecd016 478 SUPERFAMILY SSF53474 203 245 1.83E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 PANTHER PTHR11136 7 389 3.5E-102 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 Gene3D G3DSA:3.40.1190.10 3 264 1.0E-80 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 215 7.8E-69 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 SUPERFAMILY SSF53623 3 265 1.73E-77 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 Gene3D G3DSA:3.90.190.20 269 392 1.6E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 Pfam PF08245 Mur ligase middle domain 46 204 4.1E-8 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LMES_RS02170 baad1ba6c63b3bf6f3cce0130be69108 393 SUPERFAMILY SSF53244 269 392 3.66E-22 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LMES_RS02055 3a715c862baa79a37eee91d4d7a9e434 219 Pfam PF06912 Protein of unknown function (DUF1275) 16 214 1.4E-32 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 LMES_RS02055 3a715c862baa79a37eee91d4d7a9e434 219 PANTHER PTHR37314 1 219 2.1E-31 T 22-04-2016 LMES_RS02055 3a715c862baa79a37eee91d4d7a9e434 219 PANTHER PTHR37314:SF2 1 219 2.1E-31 T 22-04-2016 LMES_RS06265 dba860e630f7730f50ddf3202456f78d 316 PANTHER PTHR22916 6 236 6.8E-46 T 22-04-2016 LMES_RS06265 dba860e630f7730f50ddf3202456f78d 316 SUPERFAMILY SSF53448 4 226 3.09E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06265 dba860e630f7730f50ddf3202456f78d 316 PANTHER PTHR22916:SF24 6 236 6.8E-46 T 22-04-2016 LMES_RS06265 dba860e630f7730f50ddf3202456f78d 316 Gene3D G3DSA:3.90.550.10 2 194 4.2E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS06265 dba860e630f7730f50ddf3202456f78d 316 Pfam PF00535 Glycosyl transferase family 2 6 140 1.4E-31 T 22-04-2016 IPR001173 Glycosyltransferase 2-like LMES_RS03420 97e574574e2edc952ca39a04886c0ba7 525 SMART SM00640 39 489 2.2E-33 T 22-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 LMES_RS03420 97e574574e2edc952ca39a04886c0ba7 525 PANTHER PTHR30175:SF0 30 491 5.4E-41 T 22-04-2016 LMES_RS03420 97e574574e2edc952ca39a04886c0ba7 525 PANTHER PTHR30175 30 491 5.4E-41 T 22-04-2016 LMES_RS03420 97e574574e2edc952ca39a04886c0ba7 525 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 39 347 8.7E-54 T 22-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal LMES_RS03420 97e574574e2edc952ca39a04886c0ba7 525 SUPERFAMILY SSF75005 30 351 5.02E-53 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 Gene3D G3DSA:3.40.190.10 176 304 2.0E-38 T 22-04-2016 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 PANTHER PTHR30290 1 535 2.2E-141 T 22-04-2016 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 Gene3D G3DSA:3.90.76.10 68 175 1.8E-39 T 22-04-2016 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 Gene3D G3DSA:3.10.105.10 305 514 7.7E-44 T 22-04-2016 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 PANTHER PTHR30290:SF10 1 535 2.2E-141 T 22-04-2016 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 SUPERFAMILY SSF53850 35 538 2.68E-113 T 22-04-2016 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 PIRSF PIRSF002741 1 542 1.8E-87 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LMES_RS01610 fd7022d5b577a9d3407119b72112a2a1 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 464 3.9E-68 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain LMES_RS04770 fe22bd0f1898606ffebfd8495edc45b8 140 SUPERFAMILY SSF49764 10 133 5.93E-27 T 22-04-2016 IPR008978 HSP20-like chaperone LMES_RS04770 fe22bd0f1898606ffebfd8495edc45b8 140 Gene3D G3DSA:2.60.40.790 12 139 1.4E-28 T 22-04-2016 IPR008978 HSP20-like chaperone LMES_RS04770 fe22bd0f1898606ffebfd8495edc45b8 140 PANTHER PTHR11527:SF119 12 140 5.6E-21 T 22-04-2016 LMES_RS04770 fe22bd0f1898606ffebfd8495edc45b8 140 PANTHER PTHR11527 12 140 5.6E-21 T 22-04-2016 IPR031107 Small heat shock protein HSP20 LMES_RS04770 fe22bd0f1898606ffebfd8495edc45b8 140 Pfam PF00011 Hsp20/alpha crystallin family 38 139 7.6E-20 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain LMES_RS01115 28ae1ee7ad66aaa414fdaefb49269500 195 PANTHER PTHR30037 2 191 2.1E-80 T 22-04-2016 LMES_RS01115 28ae1ee7ad66aaa414fdaefb49269500 195 PANTHER PTHR30037:SF4 2 191 2.1E-80 T 22-04-2016 LMES_RS01115 28ae1ee7ad66aaa414fdaefb49269500 195 Pfam PF03352 Methyladenine glycosylase 16 188 1.5E-69 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 LMES_RS01115 28ae1ee7ad66aaa414fdaefb49269500 195 Gene3D G3DSA:1.10.340.30 5 188 1.5E-69 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LMES_RS01115 28ae1ee7ad66aaa414fdaefb49269500 195 SUPERFAMILY SSF48150 5 191 7.22E-66 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LMES_RS05900 28743cbd6cd80b0d210a2c0b88e35d0b 106 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 7 95 3.7E-8 T 22-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 LMES_RS05900 28743cbd6cd80b0d210a2c0b88e35d0b 106 Gene3D G3DSA:3.30.1330.30 4 98 3.6E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS05900 28743cbd6cd80b0d210a2c0b88e35d0b 106 SUPERFAMILY SSF55315 7 101 1.69E-18 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like LMES_RS06630 c3d56ef99485897f294c73da2f8a26b4 122 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 43 121 3.9E-14 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LMES_RS06630 c3d56ef99485897f294c73da2f8a26b4 122 Hamap MF_00910 Cell division protein FtsL [ftsL]. 37 121 12.277 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LMES_RS02210 8529aad5713c1d09d674ebb652969c7e 103 PIRSF PIRSF029928 1 103 5.7E-30 T 22-04-2016 IPR016940 ComG operon protein C GO:0030420 LMES_RS02210 8529aad5713c1d09d674ebb652969c7e 103 SUPERFAMILY SSF54523 11 72 2.59E-10 T 22-04-2016 LMES_RS02210 8529aad5713c1d09d674ebb652969c7e 103 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 3.7E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 LMES_RS02210 8529aad5713c1d09d674ebb652969c7e 103 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 3.7E-8 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 LMES_RS02210 8529aad5713c1d09d674ebb652969c7e 103 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 5 29 2.6E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site LMES_RS02210 8529aad5713c1d09d674ebb652969c7e 103 Gene3D G3DSA:3.30.700.10 11 87 7.6E-5 T 22-04-2016 LMES_RS02260 1596818bd68be790294bb3782aeceb0f 869 Pfam PF09586 Bacterial membrane protein YfhO 16 848 5.9E-251 T 22-04-2016 IPR018580 Uncharacterised protein family YfhO LMES_RS02260 1596818bd68be790294bb3782aeceb0f 869 PANTHER PTHR38454 1 869 7.8E-44 T 22-04-2016 LMES_RS02260 1596818bd68be790294bb3782aeceb0f 869 PANTHER PTHR38454:SF1 1 869 7.8E-44 T 22-04-2016 LMES_RS04825 a13d554981dc54916ab3bb646fbaf5e8 144 SUPERFAMILY SSF55961 1 138 3.63E-24 T 22-04-2016 LMES_RS02115 8903743eb8f0dd91ea5ef6d64e40bed8 146 Gene3D G3DSA:3.40.50.1810 1 146 8.9E-50 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LMES_RS02115 8903743eb8f0dd91ea5ef6d64e40bed8 146 SUPERFAMILY SSF52309 1 145 8.24E-44 T 22-04-2016 LMES_RS02115 8903743eb8f0dd91ea5ef6d64e40bed8 146 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 4 106 3.7E-19 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LMES_RS04895 8a8f2fe85d86a3c14ca29d9843a90e04 264 Pfam PF02517 CAAX protease self-immunity 111 212 1.5E-8 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LMES_RS07460 3b8163a7d1aa4f8cf4431995315375be 252 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 159 235 4.8E-33 T 22-04-2016 IPR011741 Phage conserved hypothetical protein, C-terminal LMES_RS07460 3b8163a7d1aa4f8cf4431995315375be 252 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 162 234 6.5E-32 T 22-04-2016 IPR011741 Phage conserved hypothetical protein, C-terminal LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 PANTHER PTHR30185:SF2 1 283 1.1E-78 T 22-04-2016 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 SUPERFAMILY SSF50151 1 54 7.59E-15 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 Pfam PF03123 CAT RNA binding domain 1 53 4.5E-18 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 SUPERFAMILY SSF63520 63 161 3.4E-28 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 Pfam PF00874 PRD domain 75 160 6.1E-23 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 Pfam PF00874 PRD domain 194 280 7.1E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 SMART SM01061 1 58 2.2E-23 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 PANTHER PTHR30185 1 283 1.1E-78 T 22-04-2016 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 Gene3D G3DSA:1.10.1790.10 170 283 8.5E-27 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 Gene3D G3DSA:1.10.1790.10 65 160 1.2E-27 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 Gene3D G3DSA:2.30.24.10 1 53 1.4E-19 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 LMES_RS04310 1f7d83cf9c3efdb9b246deb7193798f4 286 SUPERFAMILY SSF63520 173 281 3.79E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 343 5.0E-117 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 SUPERFAMILY SSF52540 36 212 2.64E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 Pfam PF13177 DNA polymerase III, delta subunit 22 167 3.6E-32 T 22-04-2016 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 Gene3D G3DSA:1.10.8.60 155 231 7.8E-32 T 22-04-2016 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 PANTHER PTHR11669 5 503 6.2E-147 T 22-04-2016 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 43 61 1.7E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 1.7E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 SUPERFAMILY SSF48019 236 350 2.55E-10 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 SMART SM00382 39 168 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 Gene3D G3DSA:1.20.272.10 232 344 8.1E-7 T 22-04-2016 LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 Gene3D G3DSA:3.40.50.300 4 154 2.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS01280 55c24d8e1960bf5c51765ef52f8cd107 575 PANTHER PTHR11669:SF0 5 503 6.2E-147 T 22-04-2016 LMES_RS09055 ae46413e8d844e582fce8002c6a432bd 163 PANTHER PTHR34473 1 163 6.9E-21 T 22-04-2016 LMES_RS09055 ae46413e8d844e582fce8002c6a432bd 163 Pfam PF03703 Bacterial PH domain 74 137 7.6E-15 T 22-04-2016 IPR005182 Domain of unknown function DUF304 LMES_RS09055 ae46413e8d844e582fce8002c6a432bd 163 PANTHER PTHR34473:SF2 1 163 6.9E-21 T 22-04-2016 LMES_RS02835 a758d10590891b2c0083991550a5480b 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 291 4.6E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02835 a758d10590891b2c0083991550a5480b 294 SUPERFAMILY SSF161098 19 276 1.87E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02835 a758d10590891b2c0083991550a5480b 294 Gene3D G3DSA:1.10.3720.10 58 287 2.9E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02835 a758d10590891b2c0083991550a5480b 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 286 3.0E-77 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LMES_RS02835 a758d10590891b2c0083991550a5480b 294 PANTHER PTHR30425:SF0 1 294 3.1E-107 T 22-04-2016 LMES_RS02835 a758d10590891b2c0083991550a5480b 294 PANTHER PTHR30425 1 294 3.1E-107 T 22-04-2016 LMES_RS08495 d87ca16c25a459485e7ece57cb79b94c 335 Pfam PF13791 Sigma factor regulator C-terminal 175 322 3.2E-20 T 22-04-2016 IPR025672 Sigma factor regulator C-terminal domain LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 Pfam PF00550 Phosphopantetheine attachment site 5 71 1.1E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 PANTHER PTHR41270 2 77 2.0E-24 T 22-04-2016 LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 SUPERFAMILY SSF47336 2 76 5.76E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 Gene3D G3DSA:1.10.1200.10 1 76 4.7E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 77 46.618 T 22-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 PANTHER PTHR41270:SF1 2 77 2.0E-24 T 22-04-2016 LMES_RS08150 9ef01c59cd2aafc809afa388e742d45b 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 74 2.4E-26 T 22-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 LMES_RS09000 fe0213434c0c997fb11df41ea60d5a6a 242 SUPERFAMILY SSF53639 1 222 5.69E-67 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS09000 fe0213434c0c997fb11df41ea60d5a6a 242 PANTHER PTHR22789:SF8 1 230 2.1E-112 T 22-04-2016 LMES_RS09000 fe0213434c0c997fb11df41ea60d5a6a 242 SMART SM01007 7 197 2.3E-65 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS09000 fe0213434c0c997fb11df41ea60d5a6a 242 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.2E-43 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS09000 fe0213434c0c997fb11df41ea60d5a6a 242 PANTHER PTHR22789 1 230 2.1E-112 T 22-04-2016 LMES_RS09000 fe0213434c0c997fb11df41ea60d5a6a 242 Gene3D G3DSA:3.40.225.10 2 230 1.6E-69 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS07280 dd2e884d979bc758874a3e9150641464 157 Pfam PF09682 Bacteriophage holin of superfamily 6 (Holin_LLH) 6 101 2.8E-6 T 22-04-2016 IPR010026 Phage holin, LL-H family LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 PANTHER PTHR11014:SF107 1 381 3.9E-136 T 22-04-2016 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 Pfam PF07687 Peptidase dimerisation domain 183 277 2.4E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 Gene3D G3DSA:3.40.630.10 6 176 1.7E-81 T 22-04-2016 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 Gene3D G3DSA:3.40.630.10 296 378 1.7E-81 T 22-04-2016 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 Gene3D G3DSA:3.30.70.360 179 295 1.1E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 365 2.5E-104 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 PANTHER PTHR11014 1 381 3.9E-136 T 22-04-2016 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 PIRSF PIRSF005962 1 379 3.7E-107 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 Pfam PF01546 Peptidase family M20/M25/M40 72 372 2.7E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 SUPERFAMILY SSF53187 296 377 1.67E-72 T 22-04-2016 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 SUPERFAMILY SSF53187 7 195 1.67E-72 T 22-04-2016 LMES_RS00515 b5d11f75aa2fce3825865712154661dc 388 SUPERFAMILY SSF55031 181 291 1.64E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain LMES_RS03765 9ac05a3f3d2ed4edd218b57edf19cc52 177 PANTHER PTHR23029:SF1 1 140 1.3E-20 T 22-04-2016 LMES_RS03765 9ac05a3f3d2ed4edd218b57edf19cc52 177 PANTHER PTHR23029 1 140 1.3E-20 T 22-04-2016 LMES_RS03765 9ac05a3f3d2ed4edd218b57edf19cc52 177 Gene3D G3DSA:3.40.50.1240 9 166 3.9E-27 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS03765 9ac05a3f3d2ed4edd218b57edf19cc52 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 143 2.2E-22 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS03765 9ac05a3f3d2ed4edd218b57edf19cc52 177 SUPERFAMILY SSF53254 7 169 2.08E-26 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 SUPERFAMILY SSF51735 2 195 1.61E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 Gene3D G3DSA:3.30.360.10 148 339 1.6E-16 T 22-04-2016 LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 9.7E-18 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 140 240 1.7E-5 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 PANTHER PTHR22604 1 339 1.1E-105 T 22-04-2016 LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 Gene3D G3DSA:3.40.50.720 1 147 2.2E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS05240 ca48cf7da9d8c0034faafce4eb8eff9d 350 PANTHER PTHR22604:SF116 1 339 1.1E-105 T 22-04-2016 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 Gene3D G3DSA:1.20.1090.10 679 898 7.3E-63 T 22-04-2016 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 SUPERFAMILY SSF56796 474 898 1.96E-101 T 22-04-2016 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 PANTHER PTHR11496 385 900 2.9E-208 T 22-04-2016 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 PANTHER PTHR11496:SF79 385 900 2.9E-208 T 22-04-2016 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 Gene3D G3DSA:3.40.50.1970 476 678 4.7E-52 T 22-04-2016 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 481 891 2.6E-104 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 Pfam PF00171 Aldehyde dehydrogenase family 17 290 1.1E-17 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 PIRSF PIRSF000111 13 900 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 Gene3D G3DSA:3.40.605.10 21 253 6.7E-30 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 SUPERFAMILY SSF53720 30 475 3.14E-64 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LMES_RS00660 d54bf28e7b2c9c1e2610abf64ee8c32c 900 Gene3D G3DSA:3.40.309.10 254 423 5.7E-10 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LMES_RS02400 c877623da666bb5ad6991c88c62dcf44 320 Pfam PF00294 pfkB family carbohydrate kinase 2 305 3.7E-51 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB LMES_RS02400 c877623da666bb5ad6991c88c62dcf44 320 PANTHER PTHR10584 3 314 3.6E-77 T 22-04-2016 LMES_RS02400 c877623da666bb5ad6991c88c62dcf44 320 PANTHER PTHR10584:SF186 3 314 3.6E-77 T 22-04-2016 LMES_RS02400 c877623da666bb5ad6991c88c62dcf44 320 SUPERFAMILY SSF53613 1 313 2.18E-76 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS02400 c877623da666bb5ad6991c88c62dcf44 320 Gene3D G3DSA:3.40.1190.20 1 318 6.0E-78 T 22-04-2016 IPR029056 Ribokinase-like LMES_RS06125 1fed1a082680c03bdc6b6852911cf79b 256 Pfam PF14393 Domain of unknown function (DUF4422) 3 217 9.3E-76 T 22-04-2016 IPR025536 Domain of unknown function DUF4422 LMES_RS04250 7a36ff6906e39c138a7bcd8e8c9a8f69 373 Gene3D G3DSA:1.20.1440.110 66 103 6.5E-5 T 22-04-2016 LMES_RS04250 7a36ff6906e39c138a7bcd8e8c9a8f69 373 SUPERFAMILY SSF53474 31 233 7.88E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04250 7a36ff6906e39c138a7bcd8e8c9a8f69 373 SUPERFAMILY SSF53474 270 372 7.88E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04250 7a36ff6906e39c138a7bcd8e8c9a8f69 373 Gene3D G3DSA:3.40.50.1820 108 371 4.6E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS04955 0b15a015e15806035314e261470e9ca8 112 Pfam PF01420 Type I restriction modification DNA specificity domain 8 110 9.9E-16 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 LMES_RS04955 0b15a015e15806035314e261470e9ca8 112 SUPERFAMILY SSF116734 8 109 4.91E-21 T 22-04-2016 LMES_RS09210 0e87aae0e64ee0dc307354f398cdffa7 390 SUPERFAMILY SSF51569 2 291 5.13E-90 T 22-04-2016 LMES_RS09210 0e87aae0e64ee0dc307354f398cdffa7 390 PANTHER PTHR10277 1 379 1.9E-158 T 22-04-2016 LMES_RS09210 0e87aae0e64ee0dc307354f398cdffa7 390 PANTHER PTHR10277:SF9 1 379 1.9E-158 T 22-04-2016 LMES_RS09210 0e87aae0e64ee0dc307354f398cdffa7 390 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LMES_RS09210 0e87aae0e64ee0dc307354f398cdffa7 390 Gene3D G3DSA:3.20.20.70 2 346 6.5E-132 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS09210 0e87aae0e64ee0dc307354f398cdffa7 390 Pfam PF00682 HMGL-like 4 272 6.2E-84 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LMES_RS04840 aa30e80e9e5c0be10811e0638f585326 387 Pfam PF13936 Helix-turn-helix domain 12 55 4.3E-12 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain LMES_RS04840 aa30e80e9e5c0be10811e0638f585326 387 Gene3D G3DSA:1.10.10.10 11 54 2.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS04840 aa30e80e9e5c0be10811e0638f585326 387 Gene3D G3DSA:3.30.420.10 204 333 3.2E-17 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS04840 aa30e80e9e5c0be10811e0638f585326 387 SUPERFAMILY SSF53098 207 362 2.15E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS04840 aa30e80e9e5c0be10811e0638f585326 387 PANTHER PTHR10948 7 376 6.4E-40 T 22-04-2016 LMES_RS04840 aa30e80e9e5c0be10811e0638f585326 387 Pfam PF00665 Integrase core domain 206 323 1.3E-16 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LMES_RS08415 6831abb3951361a16e9670f90a72b6ed 167 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 19 164 1.9E-29 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 LMES_RS08415 6831abb3951361a16e9670f90a72b6ed 167 PANTHER PTHR33445 11 165 3.0E-31 T 22-04-2016 LMES_RS08415 6831abb3951361a16e9670f90a72b6ed 167 Pfam PF00430 ATP synthase B/B' CF(0) 16 145 2.4E-24 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LMES_RS08415 6831abb3951361a16e9670f90a72b6ed 167 Hamap MF_01398 ATP synthase subunit b [atpF]. 2 164 12.611 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LMES_RS07745 3a3e0e411b5c89e7dd7608b56fb3026f 181 PANTHER PTHR41303:SF1 2 181 1.3E-27 T 22-04-2016 LMES_RS07745 3a3e0e411b5c89e7dd7608b56fb3026f 181 Pfam PF02620 Uncharacterized ACR, COG1399 58 178 5.1E-20 T 22-04-2016 IPR003772 Protein of unknown function DUF177 LMES_RS07745 3a3e0e411b5c89e7dd7608b56fb3026f 181 PANTHER PTHR41303 2 181 1.3E-27 T 22-04-2016 LMES_RS02265 ab776509e13668e1b4f39c724c258d78 205 Gene3D G3DSA:3.40.50.720 2 197 2.9E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02265 ab776509e13668e1b4f39c724c258d78 205 PANTHER PTHR15020 1 192 2.0E-19 T 22-04-2016 LMES_RS02265 ab776509e13668e1b4f39c724c258d78 205 Pfam PF13460 NAD(P)H-binding 9 191 1.0E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS02265 ab776509e13668e1b4f39c724c258d78 205 SUPERFAMILY SSF51735 1 193 3.62E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 SMART SM00487 264 463 3.3E-21 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 Gene3D G3DSA:3.40.50.300 529 706 2.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 Gene3D G3DSA:3.40.50.300 255 453 4.1E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 Pfam PF04851 Type III restriction enzyme, res subunit 266 431 3.2E-18 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 SUPERFAMILY SSF52540 232 450 6.46E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 Pfam PF00271 Helicase conserved C-terminal domain 566 663 5.5E-9 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 Hamap MF_00983 Probable primosomal protein N' [priA]. 11 802 24.166 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 TIGRFAM TIGR00595 priA: primosomal protein N' 292 800 4.0E-201 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 SMART SM00490 566 663 1.7E-10 T 22-04-2016 IPR001650 Helicase, C-terminal LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 SUPERFAMILY SSF52540 531 710 9.95E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS06710 0da5c3adb18f56378a0f7f5b767ac365 803 PANTHER PTHR30580 1 803 1.5E-267 T 22-04-2016 LMES_RS03385 70a39063dded3b71d45d50a64321d5e2 183 PANTHER PTHR11839 5 179 4.9E-37 T 22-04-2016 LMES_RS03385 70a39063dded3b71d45d50a64321d5e2 183 Pfam PF00293 NUDIX domain 41 157 9.5E-7 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LMES_RS03385 70a39063dded3b71d45d50a64321d5e2 183 SUPERFAMILY SSF55811 7 179 1.35E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS03385 70a39063dded3b71d45d50a64321d5e2 183 PANTHER PTHR11839:SF9 5 179 4.9E-37 T 22-04-2016 LMES_RS03385 70a39063dded3b71d45d50a64321d5e2 183 Gene3D G3DSA:3.90.79.10 5 179 2.2E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 SMART SM00855 2 178 5.3E-18 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 SUPERFAMILY SSF53254 1 215 2.88E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 Gene3D G3DSA:3.40.50.1240 1 215 7.2E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 PANTHER PTHR23029 1 178 2.2E-47 T 22-04-2016 LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 PANTHER PTHR23029:SF29 1 178 2.2E-47 T 22-04-2016 LMES_RS01805 f5f9f60b2157ff0d2475c3fa3aebed95 218 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 213 8.5E-33 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LMES_RS02060 71e839a84c0b36c55e88d2d95849e88e 613 Pfam PF09972 Predicted membrane protein (DUF2207) 28 545 6.3E-90 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 SMART SM00244 2 159 1.3E-30 T 22-04-2016 IPR001107 Band 7 domain LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 Pfam PF01145 SPFH domain / Band 7 family 6 176 5.3E-31 T 22-04-2016 IPR001107 Band 7 domain LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 PANTHER PTHR10264 1 208 4.0E-44 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 SUPERFAMILY SSF117892 33 165 2.75E-28 T 22-04-2016 IPR001107 Band 7 domain LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 PRINTS PR00721 Stomatin signature 135 153 4.6E-13 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 PRINTS PR00721 Stomatin signature 56 77 4.6E-13 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 PRINTS PR00721 Stomatin signature 91 108 4.6E-13 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 PRINTS PR00721 Stomatin signature 154 175 4.6E-13 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LMES_RS05375 0207dbece7d5ff607912a674c0fa124b 271 PRINTS PR00721 Stomatin signature 111 134 4.6E-13 T 22-04-2016 IPR001972 Stomatin family GO:0016020 LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 SMART SM00257 89 131 1.4E-12 T 22-04-2016 IPR018392 LysM domain LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 SUPERFAMILY SSF54001 361 473 3.58E-34 T 22-04-2016 LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 Gene3D G3DSA:3.10.350.10 88 132 8.4E-16 T 22-04-2016 IPR018392 LysM domain LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 Gene3D G3DSA:3.90.1720.10 360 473 2.6E-37 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 Pfam PF01476 LysM domain 90 131 1.2E-8 T 22-04-2016 IPR018392 LysM domain LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 Pfam PF00877 NlpC/P60 family 382 470 2.8E-25 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 SUPERFAMILY SSF54106 88 131 1.44E-10 T 22-04-2016 IPR018392 LysM domain LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 PANTHER PTHR21666 371 482 6.5E-28 T 22-04-2016 LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 PANTHER PTHR21666 90 131 6.5E-28 T 22-04-2016 LMES_RS03085 2b0fd08b6d1d8b5cba4ea461b000b914 485 PANTHER PTHR21666 225 246 6.5E-28 T 22-04-2016 LMES_RS07325 263af0f81568d23e35b110e46432c4c5 1737 Pfam PF10145 Phage-related minor tail protein 327 597 2.5E-30 T 22-04-2016 IPR010090 Phage tail tape measure protein LMES_RS07325 263af0f81568d23e35b110e46432c4c5 1737 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 309 477 1.0E-21 T 22-04-2016 IPR010090 Phage tail tape measure protein LMES_RS07325 263af0f81568d23e35b110e46432c4c5 1737 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 517 681 3.2E-9 T 22-04-2016 IPR010090 Phage tail tape measure protein LMES_RS07325 263af0f81568d23e35b110e46432c4c5 1737 SUPERFAMILY SSF53955 1513 1609 1.2E-9 T 22-04-2016 IPR023346 Lysozyme-like domain LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 139 26.313 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 PANTHER PTHR33317 1 143 6.6E-43 T 22-04-2016 LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 Gene3D G3DSA:3.30.420.140 1 139 2.3E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 136 1.1E-42 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 SMART SM00732 1 103 7.7E-35 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 SUPERFAMILY SSF53098 1 138 9.56E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LMES_RS02680 a64a2caa5ba25601c5f3ade9645592fb 143 Pfam PF03652 Holliday junction resolvase 1 137 1.7E-42 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LMES_RS06590 a26353b5dede2684f2bf69311ebd9af8 149 Pfam PF04472 Protein of unknown function (DUF552) 64 135 1.3E-22 T 22-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 LMES_RS06590 a26353b5dede2684f2bf69311ebd9af8 149 Hamap MF_01197 Cell division protein SepF [sepF]. 1 143 19.262 T 22-04-2016 IPR023052 Cell division protein SepF GO:0090529 LMES_RS06590 a26353b5dede2684f2bf69311ebd9af8 149 PANTHER PTHR35798:SF1 60 144 8.4E-23 T 22-04-2016 LMES_RS06590 a26353b5dede2684f2bf69311ebd9af8 149 PANTHER PTHR35798 60 144 8.4E-23 T 22-04-2016 LMES_RS07885 80fb8d4714f5403328ae55cacf7aa4b2 267 Pfam PF10978 Protein of unknown function (DUF2785) 73 234 2.1E-42 T 22-04-2016 IPR021247 Protein of unknown function DUF2785 LMES_RS07885 80fb8d4714f5403328ae55cacf7aa4b2 267 PANTHER PTHR41292:SF1 1 211 1.1E-31 T 22-04-2016 LMES_RS07885 80fb8d4714f5403328ae55cacf7aa4b2 267 PANTHER PTHR41292 1 211 1.1E-31 T 22-04-2016 LMES_RS05385 28c61bba84401e9316d606b748a3b150 67 Gene3D G3DSA:1.10.1470.10 5 65 8.3E-16 T 22-04-2016 IPR008462 CsbD-like LMES_RS05385 28c61bba84401e9316d606b748a3b150 67 Pfam PF05532 CsbD-like 5 57 1.5E-15 T 22-04-2016 IPR008462 CsbD-like LMES_RS05385 28c61bba84401e9316d606b748a3b150 67 SUPERFAMILY SSF69047 5 65 1.57E-10 T 22-04-2016 IPR008462 CsbD-like LMES_RS07345 d27154fc65042d71643ea6b26f1d0ce7 124 Pfam PF05657 Protein of unknown function (DUF806) 3 120 7.5E-47 T 22-04-2016 IPR008524 Protein of unknown function DUF806 LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 Gene3D G3DSA:3.90.25.10 194 333 1.1E-46 T 22-04-2016 LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 SUPERFAMILY SSF51735 5 335 2.41E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 Gene3D G3DSA:3.40.50.720 3 193 6.7E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 6 330 1.1E-136 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 317 2.7E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 PANTHER PTHR10366 6 345 5.9E-182 T 22-04-2016 LMES_RS06230 7d9b33ed914651a83ed5994fb72592d3 345 PANTHER PTHR10366:SF437 6 345 5.9E-182 T 22-04-2016 LMES_RS02600 7aebf59947e8d4f02004350417931113 244 PANTHER PTHR10794 18 242 1.9E-12 T 22-04-2016 LMES_RS02600 7aebf59947e8d4f02004350417931113 244 PANTHER PTHR10794:SF37 18 242 1.9E-12 T 22-04-2016 LMES_RS02600 7aebf59947e8d4f02004350417931113 244 Pfam PF02517 CAAX protease self-immunity 136 229 5.2E-17 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 Gene3D G3DSA:3.10.310.10 124 271 3.3E-37 T 22-04-2016 LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 PANTHER PTHR13774 1 283 2.7E-101 T 22-04-2016 LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 Gene3D G3DSA:3.10.310.10 2 121 2.5E-34 T 22-04-2016 LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 PIRSF PIRSF016184 1 283 4.6E-75 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 SUPERFAMILY SSF54506 3 279 1.57E-61 T 22-04-2016 LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 Pfam PF02567 Phenazine biosynthesis-like protein 8 276 2.3E-52 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 281 6.6E-55 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LMES_RS04810 76e98369dc81034218fb35f2bdf3c86e 283 PANTHER PTHR13774:SF20 1 283 2.7E-101 T 22-04-2016 LMES_RS00880 fb62c2d6f406e9e1110f7d06d6710e48 273 Gene3D G3DSA:1.10.3720.10 4 263 6.2E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00880 fb62c2d6f406e9e1110f7d06d6710e48 273 PANTHER PTHR30193:SF10 2 273 1.0E-94 T 22-04-2016 LMES_RS00880 fb62c2d6f406e9e1110f7d06d6710e48 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 261 2.4E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00880 fb62c2d6f406e9e1110f7d06d6710e48 273 PANTHER PTHR30193 2 273 1.0E-94 T 22-04-2016 LMES_RS00880 fb62c2d6f406e9e1110f7d06d6710e48 273 SUPERFAMILY SSF161098 8 271 1.31E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS00310 d9032c13cc54ffbd0654ecfd325cc193 98 Gene3D G3DSA:1.10.10.10 7 52 8.8E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 Gene3D G3DSA:1.10.357.10 1 192 1.2E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 59 1.5E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 PANTHER PTHR30055:SF55 1 192 2.3E-24 T 22-04-2016 LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 PANTHER PTHR30055 1 192 2.3E-24 T 22-04-2016 LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 SUPERFAMILY SSF46689 6 67 2.03E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 LMES_RS08555 e9e0f82bd876b81c35cbd78c63ca9e90 202 Pfam PF14278 Transcriptional regulator C-terminal region 101 176 1.4E-15 T 22-04-2016 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 PANTHER PTHR21015:SF22 1 363 1.9E-117 T 22-04-2016 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 PANTHER PTHR21015 1 363 1.9E-117 T 22-04-2016 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 Gene3D G3DSA:3.40.50.2000 1 195 2.9E-66 T 22-04-2016 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 SUPERFAMILY SSF53756 1 361 8.75E-105 T 22-04-2016 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 357 1.6E-97 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 361 33.107 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 1.5E-44 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 Gene3D G3DSA:3.40.50.2000 196 338 1.7E-8 T 22-04-2016 LMES_RS06610 66fa31abca33f40d30021860fbb99c14 363 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 351 8.0E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 Gene3D G3DSA:3.40.1280.10 1 158 4.1E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 Gene3D G3DSA:1.10.1270.20 159 241 5.3E-36 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 PANTHER PTHR32125 1 226 2.0E-111 T 22-04-2016 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 PIRSF PIRSF000386 1 243 6.7E-99 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 219 1.8E-66 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 SUPERFAMILY SSF75217 1 241 1.1E-97 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 3.3E-93 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 108.66 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LMES_RS06525 5a4e34837df100205e349d9eb1dd8265 243 PANTHER PTHR32125:SF1 1 226 2.0E-111 T 22-04-2016 LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 Gene3D G3DSA:3.40.50.620 5 146 2.8E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 PRINTS PR01438 Universal stress protein signature 106 118 1.71E-19 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 PRINTS PR01438 Universal stress protein signature 5 23 1.71E-19 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 PRINTS PR01438 Universal stress protein signature 124 146 1.71E-19 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 SUPERFAMILY SSF52402 5 146 4.69E-30 T 22-04-2016 LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 PANTHER PTHR31964 1 146 3.8E-27 T 22-04-2016 LMES_RS08310 46b56fd7a6772c264c66358859b2a85b 147 Pfam PF00582 Universal stress protein family 5 146 6.4E-32 T 22-04-2016 IPR006016 UspA GO:0006950 LMES_RS07385 b0fe6292b65b2c6d555dc697dc801cee 626 Pfam PF03354 Phage Terminase 105 594 8.5E-57 T 22-04-2016 IPR005021 Phage terminase LMES_RS07385 b0fe6292b65b2c6d555dc697dc801cee 626 PANTHER PTHR41287 21 615 4.6E-44 T 22-04-2016 LMES_RS06860 60579229ee382c34cc484a8e593cba30 273 Gene3D G3DSA:3.40.50.620 5 270 5.0E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS06860 60579229ee382c34cc484a8e593cba30 273 SUPERFAMILY SSF52402 4 271 1.6E-71 T 22-04-2016 LMES_RS06860 60579229ee382c34cc484a8e593cba30 273 TIGRFAM TIGR00552 nadE: NAD+ synthetase 23 271 4.8E-65 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 LMES_RS06860 60579229ee382c34cc484a8e593cba30 273 PANTHER PTHR23090:SF7 1 272 2.5E-121 T 22-04-2016 LMES_RS06860 60579229ee382c34cc484a8e593cba30 273 PANTHER PTHR23090 1 272 2.5E-121 T 22-04-2016 LMES_RS06860 60579229ee382c34cc484a8e593cba30 273 Pfam PF02540 NAD synthase 24 264 2.8E-59 T 22-04-2016 IPR022310 NAD/GMP synthase LMES_RS01900 db379a6eb8c131c8a022e5b7d54a85a2 132 Pfam PF04977 Septum formation initiator 55 128 1.4E-13 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 LMES_RS01180 08e5d92dd8104ca508904aec27fdad1e 146 PANTHER PTHR37297 3 144 2.0E-19 T 22-04-2016 LMES_RS01180 08e5d92dd8104ca508904aec27fdad1e 146 PIRSF PIRSF005087 2 146 3.6E-31 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI LMES_RS01180 08e5d92dd8104ca508904aec27fdad1e 146 PANTHER PTHR37297:SF1 3 144 2.0E-19 T 22-04-2016 LMES_RS01180 08e5d92dd8104ca508904aec27fdad1e 146 Gene3D G3DSA:3.40.50.360 5 143 1.0E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain LMES_RS01180 08e5d92dd8104ca508904aec27fdad1e 146 SUPERFAMILY SSF52218 1 140 1.1E-13 T 22-04-2016 IPR029039 Flavoprotein-like domain LMES_RS01180 08e5d92dd8104ca508904aec27fdad1e 146 Pfam PF07972 NrdI Flavodoxin like 6 137 2.7E-33 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI LMES_RS01645 dcb3ac6e32b536380cf1fb593569388b 232 Pfam PF06570 Protein of unknown function (DUF1129) 7 213 1.7E-67 T 22-04-2016 IPR009214 Protein of unknown function DUF1129 LMES_RS01645 dcb3ac6e32b536380cf1fb593569388b 232 PIRSF PIRSF033111 1 220 3.2E-38 T 22-04-2016 IPR009214 Protein of unknown function DUF1129 LMES_RS01645 dcb3ac6e32b536380cf1fb593569388b 232 SUPERFAMILY SSF103473 79 202 2.09E-5 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS07395 a5926eb3386fbbc490e24a824c9d42fd 176 SMART SM00507 73 129 2.7E-5 T 22-04-2016 IPR003615 HNH nuclease LMES_RS07395 a5926eb3386fbbc490e24a824c9d42fd 176 Pfam PF01844 HNH endonuclease 86 128 7.2E-10 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LMES_RS09050 349f8a009ee7c094fa2e90db52f5a1ab 483 Pfam PF03703 Bacterial PH domain 60 136 3.0E-14 T 22-04-2016 IPR005182 Domain of unknown function DUF304 LMES_RS09050 349f8a009ee7c094fa2e90db52f5a1ab 483 Pfam PF03703 Bacterial PH domain 238 316 5.8E-9 T 22-04-2016 IPR005182 Domain of unknown function DUF304 LMES_RS09050 349f8a009ee7c094fa2e90db52f5a1ab 483 PANTHER PTHR34473:SF1 1 482 1.2E-41 T 22-04-2016 LMES_RS09050 349f8a009ee7c094fa2e90db52f5a1ab 483 PANTHER PTHR34473 1 482 1.2E-41 T 22-04-2016 LMES_RS09050 349f8a009ee7c094fa2e90db52f5a1ab 483 PIRSF PIRSF026631 9 482 2.7E-60 T 22-04-2016 IPR014529 Uncharacterised conserved protein UCP026631 LMES_RS03090 7cbc5bb2b94ff1c4572fc7b46e2c257e 76 Pfam PF05532 CsbD-like 5 56 8.9E-14 T 22-04-2016 IPR008462 CsbD-like LMES_RS03090 7cbc5bb2b94ff1c4572fc7b46e2c257e 76 Gene3D G3DSA:1.10.1470.10 5 67 1.8E-14 T 22-04-2016 IPR008462 CsbD-like LMES_RS03090 7cbc5bb2b94ff1c4572fc7b46e2c257e 76 SUPERFAMILY SSF69047 5 67 5.36E-11 T 22-04-2016 IPR008462 CsbD-like LMES_RS09190 def3c922810b3e01735469f073490c3d 428 ProSitePatterns PS00216 Sugar transport proteins signature 1. 298 314 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LMES_RS09190 def3c922810b3e01735469f073490c3d 428 PANTHER PTHR24064:SF293 1 427 6.5E-90 T 22-04-2016 LMES_RS09190 def3c922810b3e01735469f073490c3d 428 Pfam PF00083 Sugar (and other) transporter 57 426 5.8E-42 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LMES_RS09190 def3c922810b3e01735469f073490c3d 428 SUPERFAMILY SSF103473 12 425 5.1E-73 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS09190 def3c922810b3e01735469f073490c3d 428 Gene3D G3DSA:1.20.1250.20 245 424 4.3E-18 T 22-04-2016 LMES_RS09190 def3c922810b3e01735469f073490c3d 428 PANTHER PTHR24064 1 427 6.5E-90 T 22-04-2016 LMES_RS09190 def3c922810b3e01735469f073490c3d 428 Gene3D G3DSA:1.20.1250.20 21 198 4.2E-28 T 22-04-2016 LMES_RS09235 7ebaa14377c21ca49acab2a2df10457a 394 PANTHER PTHR30508:SF0 5 392 6.8E-94 T 22-04-2016 LMES_RS09235 7ebaa14377c21ca49acab2a2df10457a 394 PANTHER PTHR30508 5 392 6.8E-94 T 22-04-2016 LMES_RS09235 7ebaa14377c21ca49acab2a2df10457a 394 Pfam PF01458 Uncharacterized protein family (UPF0051) 142 364 1.5E-56 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 LMES_RS09235 7ebaa14377c21ca49acab2a2df10457a 394 SUPERFAMILY SSF101960 7 390 3.79E-94 T 22-04-2016 LMES_RS09235 7ebaa14377c21ca49acab2a2df10457a 394 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 106 379 1.0E-72 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 LMES_RS04885 579fb116f5a32690eddaa6a5d2b8d99b 166 Gene3D G3DSA:3.40.630.30 1 142 2.5E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04885 579fb116f5a32690eddaa6a5d2b8d99b 166 Pfam PF13673 Acetyltransferase (GNAT) domain 29 140 1.2E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS04885 579fb116f5a32690eddaa6a5d2b8d99b 166 SUPERFAMILY SSF55729 1 138 6.93E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS01075 cbaac980c89635d6a8f7cd912976e27a 131 SUPERFAMILY SSF54211 7 131 1.74E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS01075 cbaac980c89635d6a8f7cd912976e27a 131 Gene3D G3DSA:3.30.230.10 6 131 1.8E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS01075 cbaac980c89635d6a8f7cd912976e27a 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 1.1E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LMES_RS01075 cbaac980c89635d6a8f7cd912976e27a 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 LMES_RS01075 cbaac980c89635d6a8f7cd912976e27a 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 33.359 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid LMES_RS01075 cbaac980c89635d6a8f7cd912976e27a 131 PANTHER PTHR21569 1 131 5.8E-68 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LMES_RS02030 4989c79b01167158ab0c763e7c7b4bb0 231 SUPERFAMILY SSF161098 21 217 6.93E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02030 4989c79b01167158ab0c763e7c7b4bb0 231 PANTHER PTHR30450:SF1 24 231 1.3E-80 T 22-04-2016 LMES_RS02030 4989c79b01167158ab0c763e7c7b4bb0 231 PANTHER PTHR30450 24 231 1.3E-80 T 22-04-2016 LMES_RS02030 4989c79b01167158ab0c763e7c7b4bb0 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 50 228 1.5E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS02030 4989c79b01167158ab0c763e7c7b4bb0 231 Gene3D G3DSA:1.10.3720.10 20 230 6.8E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 SUPERFAMILY SSF82697 2 78 2.09E-23 T 22-04-2016 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 Gene3D G3DSA:3.30.1280.10 1 79 4.5E-28 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 80 5.0E-13 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 79 1.3E-18 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 18.359 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 78 2.1E-26 T 22-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LMES_RS03465 c3be8207c7b48cf7d87ea89e64e129e6 89 PANTHER PTHR34696 1 85 1.9E-25 T 22-04-2016 LMES_RS06000 6f7d96a4fe8ab627bf4dd75e228479e9 170 SUPERFAMILY SSF55729 2 158 6.2E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS06000 6f7d96a4fe8ab627bf4dd75e228479e9 170 Pfam PF00583 Acetyltransferase (GNAT) family 56 146 2.1E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS06000 6f7d96a4fe8ab627bf4dd75e228479e9 170 Gene3D G3DSA:3.40.630.30 1 169 7.0E-48 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS02045 a92394b92167b3b5c6c076766338a2ff 280 PIRSF PIRSF002854 1 277 6.4E-85 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS02045 a92394b92167b3b5c6c076766338a2ff 280 Gene3D G3DSA:3.40.190.10 33 164 4.5E-46 T 22-04-2016 LMES_RS02045 a92394b92167b3b5c6c076766338a2ff 280 Pfam PF03180 NLPA lipoprotein 36 276 7.4E-81 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS02045 a92394b92167b3b5c6c076766338a2ff 280 PANTHER PTHR30429 3 277 5.3E-86 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS02045 a92394b92167b3b5c6c076766338a2ff 280 SUPERFAMILY SSF53850 35 278 5.43E-67 T 22-04-2016 LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 Gene3D G3DSA:3.20.20.100 1 316 7.1E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 SUPERFAMILY SSF51430 1 305 1.19E-89 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 Pfam PF00248 Aldo/keto reductase family 16 303 4.0E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 PRINTS PR00069 Aldo-keto reductase signature 238 262 1.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 PRINTS PR00069 Aldo-keto reductase signature 107 125 1.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 PRINTS PR00069 Aldo-keto reductase signature 138 155 1.0E-9 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 PANTHER PTHR11732 1 207 2.2E-125 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS09115 db11060060e47fbfa38b6dd527c0e8b5 325 PANTHER PTHR11732 227 303 2.2E-125 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS04775 74a0c5dd7cc85502222dbbae0c320d58 211 Pfam PF13460 NAD(P)H-binding 7 187 3.2E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04775 74a0c5dd7cc85502222dbbae0c320d58 211 Gene3D G3DSA:3.40.50.720 1 203 9.9E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS04775 74a0c5dd7cc85502222dbbae0c320d58 211 PANTHER PTHR15020 1 211 8.8E-28 T 22-04-2016 LMES_RS04775 74a0c5dd7cc85502222dbbae0c320d58 211 SUPERFAMILY SSF51735 1 202 3.32E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain LMES_RS01410 74c26e62cc9ba2c74181b8d3c56b6643 189 PANTHER PTHR34295 11 189 6.5E-13 T 22-04-2016 LMES_RS01410 74c26e62cc9ba2c74181b8d3c56b6643 189 Pfam PF02632 BioY family 40 179 8.2E-19 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 LMES_RS01410 74c26e62cc9ba2c74181b8d3c56b6643 189 PANTHER PTHR34295:SF1 11 189 6.5E-13 T 22-04-2016 LMES_RS07000 ff4cf58485db66251b776969b5068cf0 365 Pfam PF07949 YbbR-like protein 56 136 1.0E-6 T 22-04-2016 IPR012505 YbbR-like LMES_RS07000 ff4cf58485db66251b776969b5068cf0 365 Pfam PF07949 YbbR-like protein 145 228 1.5E-10 T 22-04-2016 IPR012505 YbbR-like LMES_RS07000 ff4cf58485db66251b776969b5068cf0 365 Pfam PF07949 YbbR-like protein 247 314 3.3E-8 T 22-04-2016 IPR012505 YbbR-like LMES_RS07000 ff4cf58485db66251b776969b5068cf0 365 PANTHER PTHR37804 1 315 1.2E-33 T 22-04-2016 LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 PANTHER PTHR11730 1 393 6.2E-156 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 Pfam PF00909 Ammonium Transporter Family 7 396 1.7E-105 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 SUPERFAMILY SSF111352 2 373 1.03E-112 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 PANTHER PTHR11730:SF17 1 393 6.2E-156 T 22-04-2016 LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 Gene3D G3DSA:1.10.3430.10 1 373 5.3E-123 T 22-04-2016 IPR029020 Ammonium/urea transporter LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 TIGRFAM TIGR00836 amt: ammonium transporter 5 394 1.3E-117 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LMES_RS03730 41f7d8f28c0710bc8b01352a0fd40543 398 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 LMES_RS03715 e409d6faff5ad6f436f7feb55e0c40ab 65 Pfam PF11151 Protein of unknown function (DUF2929) 1 54 3.6E-20 T 22-04-2016 IPR021324 Protein of unknown function DUF2929 LMES_RS04995 7893c2513c85adf97408244384660373 152 Pfam PF01230 HIT domain 38 104 5.6E-5 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS04995 7893c2513c85adf97408244384660373 152 PANTHER PTHR23089 2 114 1.4E-41 T 22-04-2016 IPR001310 Histidine triad (HIT) protein LMES_RS04995 7893c2513c85adf97408244384660373 152 Gene3D G3DSA:3.30.428.10 1 145 1.9E-29 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LMES_RS04995 7893c2513c85adf97408244384660373 152 PANTHER PTHR23089:SF13 2 114 1.4E-41 T 22-04-2016 LMES_RS04995 7893c2513c85adf97408244384660373 152 SUPERFAMILY SSF54197 1 124 7.87E-26 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 LMES_RS01455 20f1247af56c4f74c8698f2e71c74c8c 321 Pfam PF03060 Nitronate monooxygenase 86 307 9.3E-56 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 LMES_RS01455 20f1247af56c4f74c8698f2e71c74c8c 321 Pfam PF03060 Nitronate monooxygenase 9 83 1.5E-20 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 LMES_RS01455 20f1247af56c4f74c8698f2e71c74c8c 321 PANTHER PTHR32332 4 321 8.4E-120 T 22-04-2016 LMES_RS01455 20f1247af56c4f74c8698f2e71c74c8c 321 Gene3D G3DSA:3.20.20.70 3 303 4.7E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS01455 20f1247af56c4f74c8698f2e71c74c8c 321 PANTHER PTHR32332:SF20 4 321 8.4E-120 T 22-04-2016 LMES_RS01455 20f1247af56c4f74c8698f2e71c74c8c 321 SUPERFAMILY SSF51412 3 315 2.75E-72 T 22-04-2016 LMES_RS04515 5e3328264c0a9fbbb3b20ecedbfe5ea9 488 Pfam PF05893 Acyl-CoA reductase (LuxC) 64 468 2.1E-103 T 22-04-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 LMES_RS04515 5e3328264c0a9fbbb3b20ecedbfe5ea9 488 PIRSF PIRSF009414 6 488 2.1E-105 T 22-04-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 LMES_RS02725 993a2f28d840b4fb0fcd873d32f0f634 162 PANTHER PTHR10156:SF1 3 150 5.2E-27 T 22-04-2016 LMES_RS02725 993a2f28d840b4fb0fcd873d32f0f634 162 PANTHER PTHR10156 3 150 5.2E-27 T 22-04-2016 IPR008431 Cyclic nucleotide phosphodiesterase GO:0004113|GO:0009214|GO:0016020 LMES_RS02725 993a2f28d840b4fb0fcd873d32f0f634 162 SUPERFAMILY SSF52540 3 159 1.98E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02725 993a2f28d840b4fb0fcd873d32f0f634 162 Gene3D G3DSA:3.40.50.300 3 158 1.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS02725 993a2f28d840b4fb0fcd873d32f0f634 162 Pfam PF13671 AAA domain 4 58 1.1E-8 T 22-04-2016 LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 Pfam PF02699 Preprotein translocase subunit 6 80 7.7E-22 T 22-04-2016 IPR003849 Preprotein translocase YajC LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 PANTHER PTHR33909:SF1 4 108 7.8E-20 T 22-04-2016 LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 SMART SM01323 1 83 9.2E-29 T 22-04-2016 IPR003849 Preprotein translocase YajC LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 81 2.6E-19 T 22-04-2016 IPR003849 Preprotein translocase YajC LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 PANTHER PTHR33909 4 108 7.8E-20 T 22-04-2016 LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 3 23 1.2E-6 T 22-04-2016 IPR003849 Preprotein translocase YajC LMES_RS01780 06b1740eca91a5d4abcea533b80c5091 120 PRINTS PR01853 Bacterial YajC preprotein translocase signature 40 58 1.2E-6 T 22-04-2016 IPR003849 Preprotein translocase YajC LMES_RS07915 3e7da3c8ca80d0baa4cd9523d57a6f4a 268 PANTHER PTHR32502 1 266 6.2E-143 T 22-04-2016 LMES_RS07915 3e7da3c8ca80d0baa4cd9523d57a6f4a 268 Pfam PF03609 PTS system sorbose-specific iic component 4 238 1.1E-65 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LMES_RS07915 3e7da3c8ca80d0baa4cd9523d57a6f4a 268 PANTHER PTHR32502:SF10 1 266 6.2E-143 T 22-04-2016 LMES_RS06825 42b35248574a48bbe57d244e64fab2ea 505 SUPERFAMILY SSF49401 244 340 6.83E-5 T 22-04-2016 IPR008966 Adhesion domain LMES_RS06825 42b35248574a48bbe57d244e64fab2ea 505 Pfam PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain 222 335 7.8E-9 T 22-04-2016 IPR032334 Gram-positive pilin backbone subunit 2, Cna-B-like domain LMES_RS06825 42b35248574a48bbe57d244e64fab2ea 505 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 470 502 1.5E-6 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain LMES_RS06825 42b35248574a48bbe57d244e64fab2ea 505 Pfam PF16555 Gram-positive pilin subunit D1, N-terminal 24 192 2.6E-38 T 22-04-2016 IPR032364 Gram-positive pilin subunit D1, N-terminal LMES_RS06825 42b35248574a48bbe57d244e64fab2ea 505 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 191 331 7.7E-19 T 22-04-2016 IPR026466 Fimbrial isopeptide formation D2 domain LMES_RS06825 42b35248574a48bbe57d244e64fab2ea 505 Pfam PF05738 Cna protein B-type domain 362 453 2.0E-6 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain LMES_RS02555 7cdc8f6fb5ec66e946fb9b3c6ce929d6 258 PANTHER PTHR41771 1 258 1.5E-31 T 22-04-2016 LMES_RS02555 7cdc8f6fb5ec66e946fb9b3c6ce929d6 258 Pfam PF07907 YibE/F-like protein 5 241 4.1E-55 T 22-04-2016 IPR012507 YibE/F-like LMES_RS02555 7cdc8f6fb5ec66e946fb9b3c6ce929d6 258 PANTHER PTHR41771:SF1 1 258 1.5E-31 T 22-04-2016 LMES_RS02555 7cdc8f6fb5ec66e946fb9b3c6ce929d6 258 PIRSF PIRSF031503 1 258 5.4E-82 T 22-04-2016 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane LMES_RS02190 ed6e111d780eea2b14e4a1967f94cc69 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 107 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LMES_RS02190 ed6e111d780eea2b14e4a1967f94cc69 158 SUPERFAMILY SSF53927 9 142 7.62E-37 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LMES_RS02190 ed6e111d780eea2b14e4a1967f94cc69 158 PIRSF PIRSF006019 1 153 7.8E-55 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 LMES_RS02190 ed6e111d780eea2b14e4a1967f94cc69 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 118 2.0E-25 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LMES_RS02190 ed6e111d780eea2b14e4a1967f94cc69 158 PANTHER PTHR11086 5 140 1.6E-45 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related LMES_RS02190 ed6e111d780eea2b14e4a1967f94cc69 158 Gene3D G3DSA:3.40.140.10 7 145 9.2E-38 T 22-04-2016 LMES_RS01695 10114ce8f586bf5c3f24fbc1104ad30a 406 PANTHER PTHR41312 3 406 1.4E-50 T 22-04-2016 LMES_RS01695 10114ce8f586bf5c3f24fbc1104ad30a 406 Pfam PF12698 ABC-2 family transporter protein 22 376 7.1E-39 T 22-04-2016 LMES_RS08165 6b57e8ec6d0d31f53fc81c2f238bc769 46 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 5 46 3.5E-20 T 22-04-2016 IPR021008 Protein of unknown function DUF3687 LMES_RS07870 e4016872eab9280109af0c110c7eb79d 212 Pfam PF04239 Protein of unknown function (DUF421) 89 189 5.0E-30 T 22-04-2016 IPR007353 Protein of unknown function DUF421 LMES_RS07870 e4016872eab9280109af0c110c7eb79d 212 PANTHER PTHR34582:SF6 1 212 1.2E-48 T 22-04-2016 LMES_RS07870 e4016872eab9280109af0c110c7eb79d 212 Gene3D G3DSA:3.30.240.20 155 211 4.0E-11 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain LMES_RS07870 e4016872eab9280109af0c110c7eb79d 212 Gene3D G3DSA:3.30.240.20 82 153 1.1E-20 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain LMES_RS07870 e4016872eab9280109af0c110c7eb79d 212 PANTHER PTHR34582 1 212 1.2E-48 T 22-04-2016 LMES_RS04940 c3bb84ab594bf6d4226f94398d63ad7c 211 Pfam PF02698 DUF218 domain 38 194 1.5E-14 T 22-04-2016 IPR003848 Domain of unknown function DUF218 LMES_RS04940 c3bb84ab594bf6d4226f94398d63ad7c 211 Gene3D G3DSA:3.40.50.620 33 161 1.3E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS02685 b8e9ce61cfb914429b780f874041deb8 99 Hamap MF_01448 UPF0473 protein . 7 94 22.286 T 22-04-2016 IPR009711 Uncharacterised protein family UPF0473 LMES_RS02685 b8e9ce61cfb914429b780f874041deb8 99 PANTHER PTHR40066 1 98 2.3E-21 T 22-04-2016 LMES_RS02685 b8e9ce61cfb914429b780f874041deb8 99 PANTHER PTHR40066:SF1 1 98 2.3E-21 T 22-04-2016 LMES_RS02685 b8e9ce61cfb914429b780f874041deb8 99 Pfam PF06949 Protein of unknown function (DUF1292) 16 93 3.5E-15 T 22-04-2016 IPR009711 Uncharacterised protein family UPF0473 LMES_RS05880 3ad588035fb5173945bb515832370ca8 179 Gene3D G3DSA:2.70.70.10 29 168 3.8E-12 T 22-04-2016 LMES_RS05880 3ad588035fb5173945bb515832370ca8 179 SUPERFAMILY SSF51261 22 167 1.03E-18 T 22-04-2016 IPR011055 Duplicated hybrid motif LMES_RS05880 3ad588035fb5173945bb515832370ca8 179 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 37 147 1.4E-6 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS01390 3231e07f3838062fda69a8464dcd3599 289 Pfam PF13930 DNA/RNA non-specific endonuclease 171 252 5.7E-12 T 22-04-2016 LMES_RS09185 d9a901d13afac5ec418d013adffb2bce 262 Pfam PF01300 Telomere recombination 25 195 1.2E-9 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 LMES_RS09185 d9a901d13afac5ec418d013adffb2bce 262 Gene3D G3DSA:3.90.870.10 18 195 6.6E-24 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LMES_RS09185 d9a901d13afac5ec418d013adffb2bce 262 SUPERFAMILY SSF55821 11 201 1.89E-22 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LMES_RS03190 9cfd86a3204e6b79be2e9f542f4086bc 181 SUPERFAMILY SSF47413 2 56 1.66E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS03190 9cfd86a3204e6b79be2e9f542f4086bc 181 Gene3D G3DSA:1.10.260.40 2 56 5.8E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS05420 ed563a23011c3057ea5e46b9ab36c769 80 Gene3D G3DSA:1.10.260.40 15 75 9.8E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS01770 ace9f79f919079fd66ba4de47d7e507f 411 SUPERFAMILY SSF103473 29 404 1.44E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS01770 ace9f79f919079fd66ba4de47d7e507f 411 PANTHER PTHR23531 17 403 8.6E-53 T 22-04-2016 LMES_RS01770 ace9f79f919079fd66ba4de47d7e507f 411 Pfam PF07690 Major Facilitator Superfamily 36 289 9.0E-33 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS01770 ace9f79f919079fd66ba4de47d7e507f 411 Gene3D G3DSA:1.20.1250.20 30 215 3.0E-33 T 22-04-2016 LMES_RS01770 ace9f79f919079fd66ba4de47d7e507f 411 Gene3D G3DSA:1.20.1250.20 230 404 3.3E-17 T 22-04-2016 LMES_RS07515 11831344959d6b78d2ad059a28e51cb8 115 Gene3D G3DSA:1.10.260.40 1 63 8.5E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS07515 11831344959d6b78d2ad059a28e51cb8 115 SUPERFAMILY SSF47413 2 66 9.27E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS09165 dd3b870005bdb66fe486c5724d459e6a 340 PANTHER PTHR31611 1 340 1.1E-66 T 22-04-2016 LMES_RS09165 dd3b870005bdb66fe486c5724d459e6a 340 Pfam PF03824 High-affinity nickel-transport protein 43 326 2.5E-70 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 LMES_RS06035 d753f0c40acc8391ae113fc76a79eb59 175 Gene3D G3DSA:3.10.450.40 45 107 4.8E-6 T 22-04-2016 LMES_RS06035 d753f0c40acc8391ae113fc76a79eb59 175 SUPERFAMILY SSF54403 112 172 8.16E-15 T 22-04-2016 LMES_RS06035 d753f0c40acc8391ae113fc76a79eb59 175 SUPERFAMILY SSF54403 51 107 3.4E-7 T 22-04-2016 LMES_RS06035 d753f0c40acc8391ae113fc76a79eb59 175 Gene3D G3DSA:3.10.450.40 112 173 1.1E-20 T 22-04-2016 LMES_RS01415 78b00a09da80ad5b4e428a0f64694869 82 Pfam PF00202 Aminotransferase class-III 7 79 2.4E-12 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS01415 78b00a09da80ad5b4e428a0f64694869 82 PANTHER PTHR11986 8 82 3.9E-20 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LMES_RS01415 78b00a09da80ad5b4e428a0f64694869 82 SUPERFAMILY SSF53383 5 79 1.34E-14 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS01415 78b00a09da80ad5b4e428a0f64694869 82 Gene3D G3DSA:3.40.640.10 5 73 7.5E-15 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS01415 78b00a09da80ad5b4e428a0f64694869 82 PANTHER PTHR11986:SF8 8 82 3.9E-20 T 22-04-2016 LMES_RS08015 38f05f9357a4965d1e926edbc946ab35 205 SUPERFAMILY SSF52972 1 195 1.53E-38 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LMES_RS08015 38f05f9357a4965d1e926edbc946ab35 205 PANTHER PTHR11067 1 202 7.7E-27 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LMES_RS08015 38f05f9357a4965d1e926edbc946ab35 205 Pfam PF01725 Ham1 family 4 192 2.0E-27 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LMES_RS08015 38f05f9357a4965d1e926edbc946ab35 205 PANTHER PTHR11067:SF9 1 202 7.7E-27 T 22-04-2016 LMES_RS08015 38f05f9357a4965d1e926edbc946ab35 205 Gene3D G3DSA:3.90.950.10 1 195 2.0E-37 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LMES_RS05295 601d554b8163766934352f6c35e1af07 78 Gene3D G3DSA:1.10.238.10 40 71 7.9E-5 T 22-04-2016 IPR011992 EF-hand domain pair LMES_RS05295 601d554b8163766934352f6c35e1af07 78 PANTHER PTHR41297 3 71 1.6E-24 T 22-04-2016 LMES_RS05295 601d554b8163766934352f6c35e1af07 78 Pfam PF03672 Uncharacterised protein family (UPF0154) 12 70 2.2E-28 T 22-04-2016 IPR005359 Protein with unknown function UPF0154 LMES_RS05295 601d554b8163766934352f6c35e1af07 78 Hamap MF_00363 UPF0154 protein . 3 73 20.641 T 22-04-2016 IPR005359 Protein with unknown function UPF0154 LMES_RS00440 05f4ff2812cdb7baadea4597e092ad90 188 Pfam PF07155 ECF-type riboflavin transporter, S component 9 175 4.7E-20 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 LMES_RS03355 03b5e1175e762d84b88a4bb6ba8c4c55 297 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 124 245 1.9E-11 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03355 03b5e1175e762d84b88a4bb6ba8c4c55 297 Gene3D G3DSA:3.40.50.1110 120 245 4.3E-10 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03355 03b5e1175e762d84b88a4bb6ba8c4c55 297 SUPERFAMILY SSF52266 122 251 7.99E-15 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain LMES_RS03695 ee560950dad7616270c88381aab7acbd 193 Pfam PF09819 ABC-type cobalt transport system, permease component 9 133 2.9E-40 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted LMES_RS03695 ee560950dad7616270c88381aab7acbd 193 PIRSF PIRSF037394 1 192 1.1E-56 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted LMES_RS04470 c4b9ab269119d1cbd8b07d3d858ce905 168 SUPERFAMILY SSF55729 1 152 5.68E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04470 c4b9ab269119d1cbd8b07d3d858ce905 168 Gene3D G3DSA:3.40.630.30 1 152 3.9E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04470 c4b9ab269119d1cbd8b07d3d858ce905 168 PANTHER PTHR39173 1 167 8.5E-27 T 22-04-2016 LMES_RS04470 c4b9ab269119d1cbd8b07d3d858ce905 168 Pfam PF13302 Acetyltransferase (GNAT) domain 2 143 2.8E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS06585 b2df50f7b41898c6b10f00c66a50706c 87 PANTHER PTHR33219 1 86 9.0E-20 T 22-04-2016 LMES_RS06585 b2df50f7b41898c6b10f00c66a50706c 87 Pfam PF02325 YGGT family 12 78 1.3E-18 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 LMES_RS04135 134cbfe97b7e3114288828080c8418c0 234 PANTHER PTHR22789:SF8 1 231 1.5E-116 T 22-04-2016 LMES_RS04135 134cbfe97b7e3114288828080c8418c0 234 PANTHER PTHR22789 1 231 1.5E-116 T 22-04-2016 LMES_RS04135 134cbfe97b7e3114288828080c8418c0 234 SMART SM01007 7 197 3.5E-60 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS04135 134cbfe97b7e3114288828080c8418c0 234 SUPERFAMILY SSF53639 1 223 2.75E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS04135 134cbfe97b7e3114288828080c8418c0 234 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 195 1.1E-43 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS04135 134cbfe97b7e3114288828080c8418c0 234 Gene3D G3DSA:3.40.225.10 2 231 1.8E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 Gene3D G3DSA:3.40.190.10 90 172 6.1E-21 T 22-04-2016 LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 PANTHER PTHR30126 1 293 6.0E-60 T 22-04-2016 LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 Gene3D G3DSA:3.40.190.10 173 256 5.0E-9 T 22-04-2016 LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 Pfam PF03466 LysR substrate binding domain 91 285 2.8E-30 T 22-04-2016 IPR005119 LysR, substrate-binding LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 Gene3D G3DSA:1.10.10.10 6 85 7.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 SUPERFAMILY SSF53850 91 289 2.13E-30 T 22-04-2016 LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 SUPERFAMILY SSF46785 6 110 2.28E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09075 3e6a9057c95350403cc0dfa710a530fe 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LMES_RS03490 c31fd482a290520d825099f6bc3c453f 196 Pfam PF00551 Formyl transferase 6 184 2.1E-54 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS03490 c31fd482a290520d825099f6bc3c453f 196 PANTHER PTHR10520 2 195 3.2E-76 T 22-04-2016 LMES_RS03490 c31fd482a290520d825099f6bc3c453f 196 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 192 4.8E-65 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 LMES_RS03490 c31fd482a290520d825099f6bc3c453f 196 Gene3D G3DSA:3.40.50.170 4 192 1.2E-63 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS03490 c31fd482a290520d825099f6bc3c453f 196 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 191 29.36 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 LMES_RS03490 c31fd482a290520d825099f6bc3c453f 196 SUPERFAMILY SSF53328 6 194 3.66E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LMES_RS05715 15589bc7dd11251c1b36fe706651e520 335 PANTHER PTHR11732:SF191 12 329 8.4E-154 T 22-04-2016 LMES_RS05715 15589bc7dd11251c1b36fe706651e520 335 Gene3D G3DSA:3.20.20.100 11 329 3.1E-84 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS05715 15589bc7dd11251c1b36fe706651e520 335 Pfam PF00248 Aldo/keto reductase family 27 326 7.7E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS05715 15589bc7dd11251c1b36fe706651e520 335 PANTHER PTHR11732 12 329 8.4E-154 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LMES_RS05715 15589bc7dd11251c1b36fe706651e520 335 SUPERFAMILY SSF51430 12 329 3.01E-85 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain LMES_RS06405 ef0bc868afa890942902d76360529193 156 SUPERFAMILY SSF52309 3 148 6.41E-28 T 22-04-2016 LMES_RS06405 ef0bc868afa890942902d76360529193 156 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 24 112 2.1E-7 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LMES_RS06405 ef0bc868afa890942902d76360529193 156 Gene3D G3DSA:3.40.50.1810 3 108 2.1E-9 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LMES_RS04645 7a6e5460fb08fd663f30b776ce379218 410 PANTHER PTHR33392 38 230 1.3E-63 T 22-04-2016 LMES_RS04645 7a6e5460fb08fd663f30b776ce379218 410 PANTHER PTHR33392 249 372 1.3E-63 T 22-04-2016 LMES_RS04645 7a6e5460fb08fd663f30b776ce379218 410 PANTHER PTHR33392:SF5 38 230 1.3E-63 T 22-04-2016 LMES_RS04645 7a6e5460fb08fd663f30b776ce379218 410 PANTHER PTHR33392:SF5 249 372 1.3E-63 T 22-04-2016 LMES_RS04645 7a6e5460fb08fd663f30b776ce379218 410 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 107 288 7.3E-30 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS04645 7a6e5460fb08fd663f30b776ce379218 410 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 108 288 2.7E-38 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain LMES_RS02530 acbf8531e59df544e1eb1b2e9e4eda77 244 PANTHER PTHR40076:SF1 5 243 3.5E-27 T 22-04-2016 LMES_RS02530 acbf8531e59df544e1eb1b2e9e4eda77 244 PANTHER PTHR40076 5 243 3.5E-27 T 22-04-2016 LMES_RS02530 acbf8531e59df544e1eb1b2e9e4eda77 244 Pfam PF06161 Protein of unknown function (DUF975) 174 235 1.3E-18 T 22-04-2016 IPR010380 Protein of unknown function DUF975 LMES_RS02530 acbf8531e59df544e1eb1b2e9e4eda77 244 Pfam PF06161 Protein of unknown function (DUF975) 7 156 6.7E-8 T 22-04-2016 IPR010380 Protein of unknown function DUF975 LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 Gene3D G3DSA:3.40.50.300 236 394 6.2E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 Gene3D G3DSA:3.40.50.300 26 103 6.2E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 SMART SM00382 35 360 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 Pfam PF01935 Domain of unknown function DUF87 27 263 6.4E-16 T 22-04-2016 IPR002789 Helicase HerA, central domain LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 PANTHER PTHR30121 29 395 2.0E-25 T 22-04-2016 LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 SUPERFAMILY SSF52540 198 393 3.69E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03435 4e1acf509143e99a6602056cb2a217e5 409 SUPERFAMILY SSF52540 24 157 3.69E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03335 58ff10c2f7a1fb723b32143f726e21fb 114 SUPERFAMILY SSF160800 1 111 7.98E-38 T 22-04-2016 IPR014965 Putative amino acid metabolism LMES_RS03335 58ff10c2f7a1fb723b32143f726e21fb 114 Pfam PF08866 Putative amino acid metabolism 1 110 1.1E-38 T 22-04-2016 IPR014965 Putative amino acid metabolism LMES_RS03335 58ff10c2f7a1fb723b32143f726e21fb 114 Gene3D G3DSA:3.30.1820.10 1 111 3.8E-40 T 22-04-2016 IPR014965 Putative amino acid metabolism LMES_RS07675 eff934cc181db483c618599c4db2b7ae 130 SUPERFAMILY SSF102829 9 91 1.24E-5 T 22-04-2016 IPR007838 Cell division protein ZapA-like LMES_RS07675 eff934cc181db483c618599c4db2b7ae 130 Pfam PF05164 Cell division protein ZapA 12 93 2.6E-8 T 22-04-2016 IPR007838 Cell division protein ZapA-like LMES_RS05190 e0f907ffea85cf38e2c48b7e219cb86b 147 PANTHER PTHR15364:SF2 2 102 2.8E-14 T 22-04-2016 LMES_RS05190 e0f907ffea85cf38e2c48b7e219cb86b 147 SUPERFAMILY SSF52309 3 146 4.27E-47 T 22-04-2016 LMES_RS05190 e0f907ffea85cf38e2c48b7e219cb86b 147 PANTHER PTHR15364 2 102 2.8E-14 T 22-04-2016 LMES_RS05190 e0f907ffea85cf38e2c48b7e219cb86b 147 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 5 109 1.2E-22 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LMES_RS05190 e0f907ffea85cf38e2c48b7e219cb86b 147 Gene3D G3DSA:3.40.50.1810 2 147 8.6E-55 T 22-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LMES_RS07125 7832bdddbea438c7933152796da6009f 96 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 8 76 2.3E-27 T 22-04-2016 IPR016979 Protein of unknown function DUF2129 LMES_RS07125 7832bdddbea438c7933152796da6009f 96 PIRSF PIRSF031653 2 93 1.1E-27 T 22-04-2016 IPR016979 Protein of unknown function DUF2129 LMES_RS07125 7832bdddbea438c7933152796da6009f 96 PANTHER PTHR41304:SF1 4 93 2.1E-18 T 22-04-2016 LMES_RS07125 7832bdddbea438c7933152796da6009f 96 PANTHER PTHR41304 4 93 2.1E-18 T 22-04-2016 LMES_RS08920 bcff0f561b6ce24de4e5f4e7aff3c6ef 275 PANTHER PTHR33514 7 269 6.9E-85 T 22-04-2016 LMES_RS08920 bcff0f561b6ce24de4e5f4e7aff3c6ef 275 PANTHER PTHR33514:SF1 7 269 6.9E-85 T 22-04-2016 LMES_RS08920 bcff0f561b6ce24de4e5f4e7aff3c6ef 275 Pfam PF02361 Cobalt transport protein 12 229 3.5E-27 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component LMES_RS02855 08e7f6cf3cc992996c9f3cdf2552a86d 366 PANTHER PTHR10283 35 366 1.3E-27 T 22-04-2016 LMES_RS02855 08e7f6cf3cc992996c9f3cdf2552a86d 366 Pfam PF03600 Citrate transporter 11 296 6.2E-18 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LMES_RS02855 08e7f6cf3cc992996c9f3cdf2552a86d 366 PANTHER PTHR10283:SF95 35 366 1.3E-27 T 22-04-2016 LMES_RS09310 320dbc8238f72e9a0ca5e7998d9de647 346 Pfam PF13533 Biotin-lipoyl like 73 104 4.1E-7 T 22-04-2016 LMES_RS09310 320dbc8238f72e9a0ca5e7998d9de647 346 SUPERFAMILY SSF111369 58 193 2.09E-5 T 22-04-2016 LMES_RS09310 320dbc8238f72e9a0ca5e7998d9de647 346 Gene3D G3DSA:2.40.50.100 171 188 1.6E-7 T 22-04-2016 LMES_RS09310 320dbc8238f72e9a0ca5e7998d9de647 346 Gene3D G3DSA:2.40.50.100 66 95 1.6E-7 T 22-04-2016 LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.2E-15 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 Gene3D G3DSA:3.30.1390.20 1 59 2.2E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 PIRSF PIRSF002211 1 60 1.3E-21 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 5.9E-19 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 15.609 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 SUPERFAMILY SSF55129 1 59 2.22E-16 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LMES_RS00985 31ae89e864103786d5cf1ae043a13e5f 60 PANTHER PTHR15892 1 60 2.0E-16 T 22-04-2016 LMES_RS06205 aa392fc579f2ad9d754dc47973bc0978 349 Pfam PF06030 Bacterial protein of unknown function (DUF916) 34 152 4.8E-43 T 22-04-2016 IPR010317 Protein of unknown function DUF916, cell surface putative LMES_RS06205 aa392fc579f2ad9d754dc47973bc0978 349 Pfam PF11797 Protein of unknown function C-terminal (DUF3324) 165 305 3.0E-48 T 22-04-2016 IPR021759 Domain of unknown function DUF3324, C-terminal LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 187 1.2E-5 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 1.2E-5 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-5 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 330 3.1E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 Gene3D G3DSA:3.50.50.60 4 110 1.5E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PANTHER PTHR22912:SF180 1 144 3.1E-25 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PANTHER PTHR22912:SF180 161 339 3.1E-25 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 Gene3D G3DSA:3.50.50.60 111 339 1.8E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PANTHER PTHR22912 1 144 3.1E-25 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PANTHER PTHR22912 161 339 3.1E-25 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 SUPERFAMILY SSF51905 1 341 6.82E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.6E-10 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 2.6E-10 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 2.6E-10 T 22-04-2016 LMES_RS01040 d503c0a7eaafa5a659cadf9ac4422fd8 556 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.6E-10 T 22-04-2016 LMES_RS04545 5ced092d965a2973a2fed6da2440eb24 111 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 13 103 3.0E-27 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04545 5ced092d965a2973a2fed6da2440eb24 111 Gene3D G3DSA:1.20.58.80 8 104 3.4E-27 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04545 5ced092d965a2973a2fed6da2440eb24 111 SUPERFAMILY SSF46973 7 104 6.15E-27 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04545 5ced092d965a2973a2fed6da2440eb24 111 PIRSF PIRSF000699 3 111 2.1E-25 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LMES_RS04545 5ced092d965a2973a2fed6da2440eb24 111 PANTHER PTHR34382 1 111 6.0E-22 T 22-04-2016 LMES_RS02015 8767a9591ff86a09a1e0eff974b5a9f8 174 PANTHER PTHR35336:SF1 6 159 7.3E-49 T 22-04-2016 LMES_RS02015 8767a9591ff86a09a1e0eff974b5a9f8 174 PIRSF PIRSF019587 1 166 8.5E-79 T 22-04-2016 IPR026038 Putative phosphatidylglycerophosphatase LMES_RS02015 8767a9591ff86a09a1e0eff974b5a9f8 174 Pfam PF04608 Phosphatidylglycerophosphatase A 48 156 4.2E-16 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LMES_RS02015 8767a9591ff86a09a1e0eff974b5a9f8 174 PANTHER PTHR35336 6 159 7.3E-49 T 22-04-2016 LMES_RS02015 8767a9591ff86a09a1e0eff974b5a9f8 174 SUPERFAMILY SSF101307 3 160 3.92E-43 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LMES_RS02015 8767a9591ff86a09a1e0eff974b5a9f8 174 Gene3D G3DSA:1.10.3760.10 2 162 7.0E-59 T 22-04-2016 IPR027416 YutG-like domain LMES_RS08035 562d0575b55e68230846906a82ab77df 376 PANTHER PTHR41320 19 113 3.1E-60 T 22-04-2016 LMES_RS08035 562d0575b55e68230846906a82ab77df 376 PANTHER PTHR41320 131 376 3.1E-60 T 22-04-2016 LMES_RS08035 562d0575b55e68230846906a82ab77df 376 Pfam PF13303 Phosphotransferase system, EIIC 33 373 1.5E-89 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS04845 6a0ab0ee1b25bab1e8c90bad305e64a4 74 PANTHER PTHR10245:SF56 1 62 1.7E-23 T 22-04-2016 LMES_RS04845 6a0ab0ee1b25bab1e8c90bad305e64a4 74 SUPERFAMILY SSF47413 2 63 9.01E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04845 6a0ab0ee1b25bab1e8c90bad305e64a4 74 PANTHER PTHR10245 1 62 1.7E-23 T 22-04-2016 LMES_RS04845 6a0ab0ee1b25bab1e8c90bad305e64a4 74 Pfam PF12844 Helix-turn-helix domain 4 60 2.2E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS04845 6a0ab0ee1b25bab1e8c90bad305e64a4 74 Gene3D G3DSA:1.10.260.40 1 63 9.2E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS04845 6a0ab0ee1b25bab1e8c90bad305e64a4 74 SMART SM00530 5 60 2.8E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS04725 bd81e77e3e9ca1afb1efa99a2c002970 296 SUPERFAMILY SSF88713 83 259 1.14E-23 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LMES_RS04725 bd81e77e3e9ca1afb1efa99a2c002970 296 PANTHER PTHR34216 1 276 1.9E-30 T 22-04-2016 LMES_RS04725 bd81e77e3e9ca1afb1efa99a2c002970 296 Gene3D G3DSA:3.20.20.370 93 255 1.2E-18 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LMES_RS04725 bd81e77e3e9ca1afb1efa99a2c002970 296 Pfam PF01522 Polysaccharide deacetylase 120 254 1.7E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LMES_RS04165 6615c8e72f9d1d809197eb6ed0200449 175 PANTHER PTHR34297:SF1 1 149 1.8E-36 T 22-04-2016 LMES_RS04165 6615c8e72f9d1d809197eb6ed0200449 175 PANTHER PTHR34297 1 149 1.8E-36 T 22-04-2016 LMES_RS04165 6615c8e72f9d1d809197eb6ed0200449 175 Pfam PF03780 Asp23 family, cell envelope-related function 19 125 2.5E-27 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 LMES_RS03025 567f6f479304846975a3fd05439438b3 146 Pfam PF00582 Universal stress protein family 3 142 1.8E-19 T 22-04-2016 IPR006016 UspA GO:0006950 LMES_RS03025 567f6f479304846975a3fd05439438b3 146 PANTHER PTHR31964 1 146 3.5E-16 T 22-04-2016 LMES_RS03025 567f6f479304846975a3fd05439438b3 146 PANTHER PTHR31964:SF45 1 146 3.5E-16 T 22-04-2016 LMES_RS03025 567f6f479304846975a3fd05439438b3 146 Gene3D G3DSA:3.40.50.620 1 143 1.6E-27 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS03025 567f6f479304846975a3fd05439438b3 146 SUPERFAMILY SSF52402 3 142 3.01E-24 T 22-04-2016 LMES_RS03025 567f6f479304846975a3fd05439438b3 146 PRINTS PR01438 Universal stress protein signature 3 21 8.7E-12 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS03025 567f6f479304846975a3fd05439438b3 146 PRINTS PR01438 Universal stress protein signature 102 114 8.7E-12 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS03025 567f6f479304846975a3fd05439438b3 146 PRINTS PR01438 Universal stress protein signature 120 142 8.7E-12 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS09170 248df4c98316f3043f6a499c89bfed80 329 Pfam PF13349 Putative adhesin 60 328 1.7E-54 T 22-04-2016 IPR025164 Putative adhesin LMES_RS05840 8c16f730911f3e9321e6aa1ccbe7d19f 90 Gene3D G3DSA:1.10.220.80 14 89 9.7E-25 T 22-04-2016 IPR023324 BH2638-like domain LMES_RS05840 8c16f730911f3e9321e6aa1ccbe7d19f 90 PANTHER PTHR41305 4 90 2.1E-21 T 22-04-2016 LMES_RS05840 8c16f730911f3e9321e6aa1ccbe7d19f 90 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 4 90 1.0E-15 T 22-04-2016 IPR007920 Protein of unknown function UPF0223 LMES_RS05840 8c16f730911f3e9321e6aa1ccbe7d19f 90 Pfam PF05256 Uncharacterised protein family (UPF0223) 4 88 8.1E-30 T 22-04-2016 IPR007920 Protein of unknown function UPF0223 LMES_RS05840 8c16f730911f3e9321e6aa1ccbe7d19f 90 SUPERFAMILY SSF158504 7 89 1.02E-27 T 22-04-2016 IPR023324 BH2638-like domain LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 PANTHER PTHR15032 97 357 1.3E-110 T 22-04-2016 LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 PANTHER PTHR15032 12 80 1.3E-110 T 22-04-2016 LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 SUPERFAMILY SSF56281 37 305 2.9E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 Gene3D G3DSA:3.60.15.10 6 339 1.4E-114 T 22-04-2016 IPR001279 Metallo-beta-lactamase LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 PANTHER PTHR15032:SF13 97 357 1.3E-110 T 22-04-2016 LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 PANTHER PTHR15032:SF13 12 80 1.3E-110 T 22-04-2016 LMES_RS09030 1bad1c9d49100d4c5b81bee9cb4fc4b8 357 Pfam PF13483 Beta-lactamase superfamily domain 45 284 1.8E-14 T 22-04-2016 LMES_RS01190 6f6676b4c158c62288fdbda2b99f0f9d 221 SUPERFAMILY SSF48317 10 206 3.4E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS01190 6f6676b4c158c62288fdbda2b99f0f9d 221 Gene3D G3DSA:1.20.144.10 51 204 3.6E-17 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS01190 6f6676b4c158c62288fdbda2b99f0f9d 221 SMART SM00014 89 200 4.9E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS01190 6f6676b4c158c62288fdbda2b99f0f9d 221 Pfam PF01569 PAP2 superfamily 91 204 1.7E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 2 407 50.735 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 SUPERFAMILY SSF53383 3 404 1.17E-169 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 PIRSF PIRSF000412 1 407 8.0E-159 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 PANTHER PTHR11680 4 404 8.1E-229 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 Gene3D G3DSA:3.40.640.10 32 278 6.9E-103 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 Pfam PF00464 Serine hydroxymethyltransferase 5 380 3.3E-163 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 Gene3D G3DSA:3.90.1150.10 279 406 1.1E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LMES_RS03790 7be98b52ce8ed3c39545b174e052434b 410 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 217 233 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LMES_RS04325 7c9739b967b5e251327064bbedbd2bf3 181 SUPERFAMILY SSF55729 13 176 2.6E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04325 7c9739b967b5e251327064bbedbd2bf3 181 Gene3D G3DSA:3.40.630.30 8 175 1.1E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase LMES_RS04325 7c9739b967b5e251327064bbedbd2bf3 181 PANTHER PTHR13256:SF22 5 175 5.6E-34 T 22-04-2016 LMES_RS04325 7c9739b967b5e251327064bbedbd2bf3 181 PANTHER PTHR13256 5 175 5.6E-34 T 22-04-2016 LMES_RS04325 7c9739b967b5e251327064bbedbd2bf3 181 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 1.3E-21 T 22-04-2016 IPR000182 GNAT domain GO:0008080 LMES_RS06575 f4467418a544edb42e300db4228db566 220 PANTHER PTHR35794:SF2 1 159 3.6E-17 T 22-04-2016 LMES_RS06575 f4467418a544edb42e300db4228db566 220 PANTHER PTHR35794 1 159 3.6E-17 T 22-04-2016 LMES_RS06575 f4467418a544edb42e300db4228db566 220 Pfam PF05103 DivIVA protein 3 137 3.0E-22 T 22-04-2016 IPR007793 DivIVA family LMES_RS06575 f4467418a544edb42e300db4228db566 220 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 37 8.8E-12 T 22-04-2016 IPR019933 DivIVA domain LMES_RS06305 5d05448216c8579b3a7218004208e7c2 297 Gene3D G3DSA:3.70.10.10 54 182 1.8E-4 T 22-04-2016 LMES_RS06305 5d05448216c8579b3a7218004208e7c2 297 Pfam PF02706 Chain length determinant protein 5 181 3.2E-20 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PANTHER PTHR34217:SF1 1 494 1.4E-172 T 22-04-2016 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PANTHER PTHR34217 1 494 1.4E-172 T 22-04-2016 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 SUPERFAMILY SSF55486 3 489 9.52E-97 T 22-04-2016 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PIRSF PIRSF006615 1 496 4.2E-162 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 331 350 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 226 242 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 290 306 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 377 394 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 263 282 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 243 262 7.5E-57 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS07985 a72fbbfbda4822d1eb923d405a0d1941 496 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 3 490 8.0E-130 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PANTHER PTHR34448 1 409 5.9E-187 T 22-04-2016 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 1.1E-57 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 SUPERFAMILY SSF144052 4 409 3.14E-126 T 22-04-2016 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 Pfam PF02073 Thermophilic metalloprotease (M29) 4 408 3.8E-159 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 LMES_RS02505 f07179ad1ea47c19a9b2b69b7ff6015b 409 PANTHER PTHR34448:SF3 1 409 5.9E-187 T 22-04-2016 LMES_RS05780 92617af76a9de083aababc6a61edd6df 86 Pfam PF03083 Sugar efflux transporter for intercellular exchange 9 82 7.4E-7 T 22-04-2016 IPR004316 SWEET sugar transporter GO:0016021 LMES_RS01845 b8bb78058c870a07401b4d924839c91b 87 Pfam PF08796 Protein of unknown function (DUF1797) 14 80 4.8E-26 T 22-04-2016 IPR014904 Protein of unknown function DUF1797 LMES_RS01845 b8bb78058c870a07401b4d924839c91b 87 SUPERFAMILY SSF143567 9 81 1.83E-22 T 22-04-2016 LMES_RS02350 4221f3a32c8db7a1dda1e0298f98f40a 134 PANTHER PTHR33202 1 129 2.0E-25 T 22-04-2016 LMES_RS02350 4221f3a32c8db7a1dda1e0298f98f40a 134 SUPERFAMILY SSF46785 5 129 1.05E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS02350 4221f3a32c8db7a1dda1e0298f98f40a 134 Pfam PF01475 Ferric uptake regulator family 12 126 3.4E-20 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LMES_RS02350 4221f3a32c8db7a1dda1e0298f98f40a 134 Gene3D G3DSA:1.10.10.10 5 80 1.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LMES_RS09285 bd429887ea50cd210303de1fcb21757b 87 PANTHER PTHR33885 5 65 8.4E-26 T 22-04-2016 LMES_RS09285 bd429887ea50cd210303de1fcb21757b 87 Pfam PF04024 PspC domain 5 62 1.5E-24 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal LMES_RS01500 49a14f6133615713ffc1df3a9fc383d4 166 PANTHER PTHR41289 4 154 2.3E-34 T 22-04-2016 LMES_RS01500 49a14f6133615713ffc1df3a9fc383d4 166 PIRSF PIRSF032285 1 161 1.5E-57 T 22-04-2016 IPR011235 MepB-like LMES_RS01500 49a14f6133615713ffc1df3a9fc383d4 166 Pfam PF08877 MepB protein 25 146 1.1E-48 T 22-04-2016 IPR011235 MepB-like LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 11 246 9.0E-54 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 SUPERFAMILY SSF51351 8 255 1.7E-74 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 8 256 32.463 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 PANTHER PTHR21139 7 253 4.7E-81 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 ProSitePatterns PS00171 Triosephosphate isomerase active site. 171 181 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 Gene3D G3DSA:3.20.20.70 8 256 2.0E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LMES_RS01105 11e86fb6d77de61638b5817fd56586a5 269 Pfam PF00121 Triosephosphate isomerase 11 253 1.2E-75 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LMES_RS07355 a555579e2529a653837ca16eb362ba20 123 Pfam PF05521 Phage head-tail joining protein 14 103 6.5E-10 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor LMES_RS07355 a555579e2529a653837ca16eb362ba20 123 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 14 112 1.1E-8 T 22-04-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 Gene3D G3DSA:3.40.1390.30 3 113 1.9E-46 T 22-04-2016 LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 PANTHER PTHR13799:SF13 4 261 8.9E-74 T 22-04-2016 LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 243 1.0E-74 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 PANTHER PTHR13799 4 261 8.9E-74 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 256 1.4E-58 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 Gene3D G3DSA:3.40.1390.30 114 222 7.6E-37 T 22-04-2016 LMES_RS03705 d54973700cca79f4a8ba22c0bf213e60 261 SUPERFAMILY SSF102705 3 260 1.7E-81 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LMES_RS06150 b5069753306f51adee5f5f6c1bff857e 180 Pfam PF13529 Peptidase_C39 like family 25 145 7.8E-11 T 22-04-2016 LMES_RS06150 b5069753306f51adee5f5f6c1bff857e 180 SUPERFAMILY SSF54001 29 171 3.13E-7 T 22-04-2016 LMES_RS02985 3a7a2267288e12a50d831e23cf2ff4c1 204 Pfam PF12822 Protein of unknown function (DUF3816) 8 189 2.4E-16 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 LMES_RS00325 1dabc8e1261a14569d394a80b2d56fe3 401 Gene3D G3DSA:1.20.1250.20 18 187 8.4E-15 T 22-04-2016 LMES_RS00325 1dabc8e1261a14569d394a80b2d56fe3 401 Gene3D G3DSA:1.20.1250.20 218 399 7.4E-8 T 22-04-2016 LMES_RS00325 1dabc8e1261a14569d394a80b2d56fe3 401 PANTHER PTHR23514 1 401 1.2E-66 T 22-04-2016 LMES_RS00325 1dabc8e1261a14569d394a80b2d56fe3 401 SUPERFAMILY SSF103473 5 398 7.06E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS00325 1dabc8e1261a14569d394a80b2d56fe3 401 PANTHER PTHR23514:SF1 1 401 1.2E-66 T 22-04-2016 LMES_RS00325 1dabc8e1261a14569d394a80b2d56fe3 401 Pfam PF07690 Major Facilitator Superfamily 21 359 7.3E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS08280 5903b424d85254706dfdbb3bdbecc05a 571 PANTHER PTHR41314 1 571 8.2E-91 T 22-04-2016 LMES_RS08280 5903b424d85254706dfdbb3bdbecc05a 571 Pfam PF06160 Septation ring formation regulator, EzrA 7 563 5.6E-159 T 22-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 LMES_RS02050 3c2174ab8d098ccdd75a0149612740e0 281 Pfam PF03180 NLPA lipoprotein 36 275 3.7E-93 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS02050 3c2174ab8d098ccdd75a0149612740e0 281 SUPERFAMILY SSF53850 35 275 3.26E-75 T 22-04-2016 LMES_RS02050 3c2174ab8d098ccdd75a0149612740e0 281 Gene3D G3DSA:3.40.190.10 33 165 8.4E-51 T 22-04-2016 LMES_RS02050 3c2174ab8d098ccdd75a0149612740e0 281 PANTHER PTHR30429 3 276 1.2E-100 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS02050 3c2174ab8d098ccdd75a0149612740e0 281 PIRSF PIRSF002854 1 276 6.5E-95 T 22-04-2016 IPR004872 Lipoprotein NlpA family LMES_RS07695 0b81f1e2c31720ce087de6e65a954f09 130 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 86 5.6E-17 T 22-04-2016 IPR009293 Uncharacterised protein family UPF0478 LMES_RS03185 e46e1a82b9c35d02e55a249b5d8df140 224 PANTHER PTHR30353:SF0 1 220 2.3E-64 T 22-04-2016 LMES_RS03185 e46e1a82b9c35d02e55a249b5d8df140 224 Pfam PF09335 SNARE associated Golgi protein 46 177 6.9E-24 T 22-04-2016 IPR032816 SNARE associated Golgi protein LMES_RS03185 e46e1a82b9c35d02e55a249b5d8df140 224 PANTHER PTHR30353 1 220 2.3E-64 T 22-04-2016 IPR032818 DedA family LMES_RS08540 e7ba479649c549d0b830ba68f2ea4dc3 312 Pfam PF13536 Putative multidrug resistance efflux transporter 46 306 2.9E-79 T 22-04-2016 IPR032713 Putative multidrug resistance efflux transporter LMES_RS09255 40f37a49b0fb0a6ac307ed7c7279e719 106 Pfam PF01883 Domain of unknown function DUF59 10 82 1.6E-17 T 22-04-2016 IPR002744 Domain of unknown function DUF59 LMES_RS09255 40f37a49b0fb0a6ac307ed7c7279e719 106 SUPERFAMILY SSF117916 8 103 3.92E-31 T 22-04-2016 LMES_RS09255 40f37a49b0fb0a6ac307ed7c7279e719 106 PANTHER PTHR13696 1 102 1.3E-14 T 22-04-2016 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 Pfam PF13180 PDZ domain 129 191 4.1E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 SUPERFAMILY SSF54211 234 350 3.53E-16 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 SUPERFAMILY SSF50156 130 201 2.8E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 PANTHER PTHR10046:SF48 318 356 1.1E-32 T 22-04-2016 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 PANTHER PTHR10046:SF48 237 302 1.1E-32 T 22-04-2016 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 Gene3D G3DSA:2.30.42.10 127 191 4.6E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 Gene3D G3DSA:3.30.230.10 231 350 1.5E-18 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 239 303 7.5E-5 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 PANTHER PTHR10046 318 356 1.1E-32 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LMES_RS07110 c29a8157c8883aaaf7ebc0db9b030349 363 PANTHER PTHR10046 237 302 1.1E-32 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 Pfam PF13514 AAA domain 1 204 1.2E-23 T 22-04-2016 LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 PANTHER PTHR41259:SF1 1 588 1.3E-24 T 22-04-2016 LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 Gene3D G3DSA:3.40.1140.10 710 775 1.7E-19 T 22-04-2016 LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 Gene3D G3DSA:3.40.1140.10 1 88 1.7E-19 T 22-04-2016 LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 SUPERFAMILY SSF52540 575 773 2.83E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 SUPERFAMILY SSF52540 1 51 2.83E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LMES_RS03505 4446a5b99fd0bb3817a69d1dd08dc06a 787 PANTHER PTHR41259 1 588 1.3E-24 T 22-04-2016 LMES_RS00060 a49da87d4146f842193efc0971beb16d 482 TIGRFAM TIGR03713 acc_sec_asp1: accessory Sec system protein Asp1 13 473 2.3E-64 T 22-04-2016 IPR022372 Accessory secretory system protein Asp1 GO:0015031 LMES_RS00060 a49da87d4146f842193efc0971beb16d 482 Pfam PF16993 Accessory Sec system protein Asp1 13 472 2.1E-46 T 22-04-2016 IPR022372 Accessory secretory system protein Asp1 GO:0015031 LMES_RS00565 aefdfc15ec9d41733e2b08ab87b424cd 212 Pfam PF03006 Haemolysin-III related 7 201 2.5E-28 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LMES_RS00565 aefdfc15ec9d41733e2b08ab87b424cd 212 PANTHER PTHR20855 12 212 2.8E-34 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LMES_RS00565 aefdfc15ec9d41733e2b08ab87b424cd 212 PANTHER PTHR20855:SF3 12 212 2.8E-34 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 LMES_RS08590 7c587e0996a1644c3eaf79f3cc2b7ee2 191 Pfam PF11611 Domain of unknown function (DUF4352) 64 184 9.4E-30 T 22-04-2016 IPR029051 Domain of unknown function DUF4352 LMES_RS08590 7c587e0996a1644c3eaf79f3cc2b7ee2 191 Gene3D G3DSA:2.60.40.1240 63 189 2.7E-27 T 22-04-2016 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain LMES_RS05255 ac298abfdb8c5a871a3cb6828c12458c 370 Pfam PF05656 Protein of unknown function (DUF805) 8 103 5.5E-9 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 LMES_RS06185 999119491fe8d7a0cb93bcd946c57896 349 Pfam PF01757 Acyltransferase family 8 324 4.1E-19 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LMES_RS01210 4a2b8b2fb197ead262981dd7a9ef6c2f 69 Pfam PF11184 Protein of unknown function (DUF2969) 1 68 4.7E-17 T 22-04-2016 IPR021351 Protein of unknown function DUF2969 LMES_RS02375 9b78ff04195ce1baed5fd8ac1a47c024 695 Pfam PF00999 Sodium/hydrogen exchanger family 10 412 1.2E-43 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LMES_RS02375 9b78ff04195ce1baed5fd8ac1a47c024 695 PANTHER PTHR10110 7 566 1.4E-88 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 LMES_RS02375 9b78ff04195ce1baed5fd8ac1a47c024 695 PANTHER PTHR10110 590 694 1.4E-88 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 LMES_RS02375 9b78ff04195ce1baed5fd8ac1a47c024 695 PANTHER PTHR10110:SF120 7 566 1.4E-88 T 22-04-2016 LMES_RS02375 9b78ff04195ce1baed5fd8ac1a47c024 695 PANTHER PTHR10110:SF120 590 694 1.4E-88 T 22-04-2016 LMES_RS04590 c27b87af3aa6e7e0583ae70c7ddacd2d 274 PANTHER PTHR13778 2 254 6.2E-16 T 22-04-2016 LMES_RS04590 c27b87af3aa6e7e0583ae70c7ddacd2d 274 SUPERFAMILY SSF53448 4 267 1.94E-60 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS04590 c27b87af3aa6e7e0583ae70c7ddacd2d 274 Pfam PF01501 Glycosyl transferase family 8 5 252 1.1E-32 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 LMES_RS04590 c27b87af3aa6e7e0583ae70c7ddacd2d 274 PANTHER PTHR13778:SF1 2 254 6.2E-16 T 22-04-2016 LMES_RS04590 c27b87af3aa6e7e0583ae70c7ddacd2d 274 Gene3D G3DSA:3.90.550.10 4 267 1.0E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LMES_RS05505 8cb44658eba237cc6eca13034a131b3c 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 6.4E-37 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LMES_RS05505 8cb44658eba237cc6eca13034a131b3c 164 SUPERFAMILY SSF52728 1 163 4.84E-41 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LMES_RS05505 8cb44658eba237cc6eca13034a131b3c 164 Gene3D G3DSA:3.40.35.10 1 163 6.6E-42 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LMES_RS05505 8cb44658eba237cc6eca13034a131b3c 164 PANTHER PTHR33799 1 149 8.3E-19 T 22-04-2016 LMES_RS01595 d634aaa88d74ceb4f13659b092dd657e 155 Pfam PF00582 Universal stress protein family 13 152 2.9E-20 T 22-04-2016 IPR006016 UspA GO:0006950 LMES_RS01595 d634aaa88d74ceb4f13659b092dd657e 155 SUPERFAMILY SSF52402 13 152 1.1E-23 T 22-04-2016 LMES_RS01595 d634aaa88d74ceb4f13659b092dd657e 155 Gene3D G3DSA:3.40.50.620 13 152 3.5E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LMES_RS01595 d634aaa88d74ceb4f13659b092dd657e 155 PRINTS PR01438 Universal stress protein signature 113 125 4.1E-9 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS01595 d634aaa88d74ceb4f13659b092dd657e 155 PRINTS PR01438 Universal stress protein signature 130 152 4.1E-9 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS01595 d634aaa88d74ceb4f13659b092dd657e 155 PRINTS PR01438 Universal stress protein signature 13 31 4.1E-9 T 22-04-2016 IPR006015 Universal stress protein A LMES_RS08445 6ea33f27762198bacce48cb1978b2129 225 Pfam PF16069 Domain of unknown function (DUF4811) 23 177 5.1E-58 T 22-04-2016 IPR032083 Protein of unknown function DUF4811 LMES_RS06375 e62b5cdc3d819665e036a879ceb9cf1d 104 Pfam PF03083 Sugar efflux transporter for intercellular exchange 25 102 4.3E-7 T 22-04-2016 IPR004316 SWEET sugar transporter GO:0016021 LMES_RS04965 f52cd84777e39cee5500d3dfbf325532 267 Pfam PF02517 CAAX protease self-immunity 105 206 7.2E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LMES_RS07030 0bf4212bbc540327326bc3dc0ae64ac0 75 Pfam PF05532 CsbD-like 5 57 6.5E-13 T 22-04-2016 IPR008462 CsbD-like LMES_RS07030 0bf4212bbc540327326bc3dc0ae64ac0 75 SUPERFAMILY SSF69047 5 67 7.59E-9 T 22-04-2016 IPR008462 CsbD-like LMES_RS07030 0bf4212bbc540327326bc3dc0ae64ac0 75 Gene3D G3DSA:1.10.1470.10 5 68 1.8E-12 T 22-04-2016 IPR008462 CsbD-like LMES_RS00320 848e62525b2d0669b062d28505d9e361 467 PANTHER PTHR32024:SF1 26 467 2.0E-152 T 22-04-2016 LMES_RS00320 848e62525b2d0669b062d28505d9e361 467 PANTHER PTHR32024 26 467 2.0E-152 T 22-04-2016 LMES_RS00320 848e62525b2d0669b062d28505d9e361 467 Pfam PF02386 Cation transport protein 63 446 3.3E-60 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 LMES_RS00400 b71da8273c88fe0d19141d657f00dc12 449 Pfam PF13437 HlyD family secretion protein 311 424 1.4E-13 T 22-04-2016 LMES_RS00400 b71da8273c88fe0d19141d657f00dc12 449 TIGRFAM TIGR01000 bacteriocin_acc: bacteriocin secretion accessory protein 1 447 3.3E-115 T 22-04-2016 IPR005696 Mesentericin y105 secretion protein GO:0005215|GO:0006810 LMES_RS08795 2d0fc82c24d43eb5e612fe4ae707b954 267 Pfam PF09648 YycH protein 32 260 9.4E-44 T 22-04-2016 IPR018604 Regulatory protein YycH-like GO:0016021 LMES_RS02580 ad9eae35abed6aeb8f600de0b541836f 82 Pfam PF00550 Phosphopantetheine attachment site 15 77 4.7E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS02580 ad9eae35abed6aeb8f600de0b541836f 82 Hamap MF_01217 Acyl carrier protein [acpP]. 7 81 16.506 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LMES_RS02580 ad9eae35abed6aeb8f600de0b541836f 82 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 38 80 7.0E-9 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LMES_RS02580 ad9eae35abed6aeb8f600de0b541836f 82 Gene3D G3DSA:1.10.1200.10 2 81 1.7E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS02580 ad9eae35abed6aeb8f600de0b541836f 82 SUPERFAMILY SSF47336 2 81 1.83E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain LMES_RS02580 ad9eae35abed6aeb8f600de0b541836f 82 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 8 81 1.7E-20 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LMES_RS00640 cfcb6f3acc77881d83fa73ebde3daebd 185 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 12 174 3.0E-34 T 22-04-2016 IPR030949 ECF transporter S component, folate family LMES_RS00640 cfcb6f3acc77881d83fa73ebde3daebd 185 Pfam PF12822 Protein of unknown function (DUF3816) 16 170 4.1E-18 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 LMES_RS04555 248dce26df8ea0912582f348cd92229e 34 Pfam PF16935 Putative Holin-like Toxin (Hol-Tox) 1 34 5.4E-14 T 22-04-2016 IPR031616 Putative Holin-like Toxin (Hol-Tox) LMES_RS08505 9240df18500e2faccfc4dce6352c70e2 129 Gene3D G3DSA:1.10.260.40 5 61 9.0E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08505 9240df18500e2faccfc4dce6352c70e2 129 Pfam PF01381 Helix-turn-helix 6 59 4.0E-17 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08505 9240df18500e2faccfc4dce6352c70e2 129 SUPERFAMILY SSF47413 5 67 5.88E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS08505 9240df18500e2faccfc4dce6352c70e2 129 SMART SM00530 5 60 3.9E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LMES_RS08505 9240df18500e2faccfc4dce6352c70e2 129 PANTHER PTHR10245 5 117 5.0E-17 T 22-04-2016 LMES_RS08170 72fd761f8534d8692acf38d4a6a78650 398 PANTHER PTHR33989 196 397 4.5E-23 T 22-04-2016 LMES_RS00685 805557c286abdba93705813712214c03 330 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 322 5.0E-55 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LMES_RS01895 abef88832284aad7c551a14378e06219 93 Gene3D G3DSA:3.10.290.10 1 85 1.5E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS01895 abef88832284aad7c551a14378e06219 93 PIRSF PIRSF038881 1 87 1.5E-34 T 22-04-2016 IPR025490 RNA-binding protein, HP1423 type LMES_RS01895 abef88832284aad7c551a14378e06219 93 SUPERFAMILY SSF55174 1 77 3.27E-20 T 22-04-2016 LMES_RS01895 abef88832284aad7c551a14378e06219 93 Pfam PF01479 S4 domain 1 46 3.4E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS01895 abef88832284aad7c551a14378e06219 93 SMART SM00363 1 64 1.0E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LMES_RS06295 c973cbb336d1d9f330f7a7bd3784a589 219 PANTHER PTHR30576 2 193 2.8E-67 T 22-04-2016 LMES_RS06295 c973cbb336d1d9f330f7a7bd3784a589 219 Pfam PF02397 Bacterial sugar transferase 8 185 3.1E-50 T 22-04-2016 IPR003362 Bacterial sugar transferase LMES_RS04150 0879fd601db0b394f33a785de3f3d51f 81 Pfam PF04226 Transglycosylase associated protein 31 75 3.1E-11 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 LMES_RS00350 a942c5133e60a20e004288a3369ed5bb 221 Pfam PF02517 CAAX protease self-immunity 131 216 7.2E-11 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LMES_RS04990 5d554f21424dd9e71e74b7245056d1da 137 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 27 104 1.7E-5 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LMES_RS04990 5d554f21424dd9e71e74b7245056d1da 137 Gene3D G3DSA:3.40.140.10 1 134 1.6E-34 T 22-04-2016 LMES_RS04990 5d554f21424dd9e71e74b7245056d1da 137 SUPERFAMILY SSF53927 3 134 7.41E-26 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LMES_RS02905 8f33dda54f8ce889fec65398c9e681fb 219 Pfam PF09335 SNARE associated Golgi protein 47 176 4.8E-13 T 22-04-2016 IPR032816 SNARE associated Golgi protein LMES_RS02905 8f33dda54f8ce889fec65398c9e681fb 219 PANTHER PTHR30353 1 202 1.0E-16 T 22-04-2016 IPR032818 DedA family LMES_RS02905 8f33dda54f8ce889fec65398c9e681fb 219 PANTHER PTHR30353:SF0 1 202 1.0E-16 T 22-04-2016 LMES_RS04275 08391ca2ed4256c7392209b1e9949b07 450 Gene3D G3DSA:1.20.1250.20 252 442 4.1E-14 T 22-04-2016 LMES_RS04275 08391ca2ed4256c7392209b1e9949b07 450 Gene3D G3DSA:1.20.1250.20 17 219 1.1E-17 T 22-04-2016 LMES_RS04275 08391ca2ed4256c7392209b1e9949b07 450 Pfam PF07690 Major Facilitator Superfamily 22 403 9.6E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LMES_RS04275 08391ca2ed4256c7392209b1e9949b07 450 SUPERFAMILY SSF103473 16 441 7.72E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain LMES_RS04275 08391ca2ed4256c7392209b1e9949b07 450 PANTHER PTHR19432 10 439 4.1E-46 T 22-04-2016 LMES_RS06880 3e9f36aa1bdf8bab62e71c51c5bbc414 196 PIRSF PIRSF037394 8 196 2.0E-51 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted LMES_RS06880 3e9f36aa1bdf8bab62e71c51c5bbc414 196 Pfam PF09819 ABC-type cobalt transport system, permease component 18 139 6.1E-35 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted LMES_RS09430 a6696626997f16897af903d0b79f7815 75 Pfam PF01473 Putative cell wall binding repeat 16 27 0.07 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS09430 a6696626997f16897af903d0b79f7815 75 Pfam PF01473 Putative cell wall binding repeat 36 49 0.12 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat LMES_RS09430 a6696626997f16897af903d0b79f7815 75 SUPERFAMILY SSF69360 10 70 1.44E-11 T 22-04-2016 LMES_RS09430 a6696626997f16897af903d0b79f7815 75 Gene3D G3DSA:2.10.270.10 14 70 4.7E-11 T 22-04-2016 LMES_RS07585 22988b901cbed81e8240f78928651969 60 Pfam PF11240 Protein of unknown function (DUF3042) 1 54 8.6E-21 T 22-04-2016 IPR021402 Protein of unknown function DUF3042 LMES_RS05520 292bb4ee33c4163ca9ea1124cd85594a 378 Gene3D G3DSA:3.40.50.1820 124 375 1.6E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS05520 292bb4ee33c4163ca9ea1124cd85594a 378 SUPERFAMILY SSF53474 31 235 3.53E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS05520 292bb4ee33c4163ca9ea1124cd85594a 378 SUPERFAMILY SSF53474 272 375 3.53E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold LMES_RS08500 47e014346153ccc9d57135ef7111b918 86 Pfam PF03083 Sugar efflux transporter for intercellular exchange 8 83 7.8E-8 T 22-04-2016 IPR004316 SWEET sugar transporter GO:0016021 LMES_RS07360 2615b225fb7d7f198f8c6bf95f39900f 110 Pfam PF05135 Phage gp6-like head-tail connector protein 26 102 2.8E-6 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein LMES_RS04985 1dc42d63d907c88451b833a28321eec0 204 Pfam PF03596 Cadmium resistance transporter 12 200 4.4E-48 T 22-04-2016 IPR004676 Cadmium resistance transporter LMES_RS04265 7fe8ce8e5d07b3214fea31f9a1ad5609 280 SUPERFAMILY SSF158560 2 89 3.53E-17 T 22-04-2016 LMES_RS06210 743e57741efdfd559b1cea577abb5afe 256 Pfam PF13731 WxL domain surface cell wall-binding 32 255 1.3E-55 T 22-04-2016 IPR027994 WxL domain LMES_RS09280 68de8446eca76ee6f666711355c6029f 444 Pfam PF13349 Putative adhesin 209 443 1.2E-24 T 22-04-2016 IPR025164 Putative adhesin LMES_RS04105 47cef2b5927e1a6eb9aed9c56bf3e510 248 Pfam PF02517 CAAX protease self-immunity 99 199 3.7E-14 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 LMES_RS06220 6bd67ef353e1bd20f6ef3b85ed3cf393 484 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 83 336 1.5E-11 T 22-04-2016 IPR026588 Choice-of-anchor A domain LMES_RS07855 45029602e20fb586e4a8e3e69894416e 412 Pfam PF13303 Phosphotransferase system, EIIC 49 408 9.8E-71 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LMES_RS07855 45029602e20fb586e4a8e3e69894416e 412 PANTHER PTHR41320 35 132 3.1E-50 T 22-04-2016 LMES_RS07855 45029602e20fb586e4a8e3e69894416e 412 PANTHER PTHR41320 151 412 3.1E-50 T 22-04-2016 LMES_RS03680 16e5f68eee65e9669338e99cf2afa4e6 213 PANTHER PTHR33514 1 212 4.9E-14 T 22-04-2016 LMES_RS03680 16e5f68eee65e9669338e99cf2afa4e6 213 Pfam PF02361 Cobalt transport protein 9 185 2.6E-8 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component LMES_RS00265 e762ffb4cc421b5c77643788b5cf3a2a 255 Pfam PF12679 ABC-2 family transporter protein 52 254 1.4E-7 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 LMES_RS00470 fb67484c35cca0714e7256d6a888d32b 160 Pfam PF04138 GtrA-like protein 11 159 4.0E-13 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 LMES_RS02635 24c2892b455563ad481f6823add7c050 239 Pfam PF03306 Alpha-acetolactate decarboxylase 4 221 7.3E-72 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 LMES_RS02635 24c2892b455563ad481f6823add7c050 239 PIRSF PIRSF001332 1 236 7.8E-75 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 LMES_RS02635 24c2892b455563ad481f6823add7c050 239 Gene3D G3DSA:3.30.1330.80 86 200 1.4E-40 T 22-04-2016 LMES_RS02635 24c2892b455563ad481f6823add7c050 239 SUPERFAMILY SSF117856 3 235 7.85E-71 T 22-04-2016 LMES_RS02635 24c2892b455563ad481f6823add7c050 239 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 2 235 1.5E-69 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 LMES_RS02635 24c2892b455563ad481f6823add7c050 239 PANTHER PTHR35524 1 236 1.3E-58 T 22-04-2016 LMES_RS04205 52f1f4db7c33d14fd4210f5222687c6c 215 Pfam PF05128 Domain of unknown function (DUF697) 69 194 9.4E-9 T 22-04-2016 IPR021147 Protein of unknown function DUF697 LMES_RS02990 f7642c103ee2f765073201147467e915 204 Pfam PF12822 Protein of unknown function (DUF3816) 7 189 1.9E-13 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 LMES_RS09020 61be4b16d055050aca314539b911c9cb 503 PANTHER PTHR33843 8 471 4.1E-91 T 22-04-2016 LMES_RS09020 61be4b16d055050aca314539b911c9cb 503 Pfam PF03611 PTS system sugar-specific permease component 18 442 1.1E-114 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 LMES_RS09020 61be4b16d055050aca314539b911c9cb 503 PANTHER PTHR33843:SF5 8 471 4.1E-91 T 22-04-2016 LMES_RS03650 4066007a4a385e660f23c0ae5863293a 182 Pfam PF12822 Protein of unknown function (DUF3816) 8 172 5.3E-17 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 LMES_RS09335 33e7ff20ef1965f999cbf1a1f3b2aa8c 330 PANTHER PTHR30106 7 330 1.8E-55 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 LMES_RS09335 33e7ff20ef1965f999cbf1a1f3b2aa8c 330 Pfam PF03601 Conserved hypothetical protein 698 10 309 6.0E-71 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 LMES_RS04640 5ff4f296c5984351d7ccd1d259e5bb3b 202 Pfam PF03413 Peptidase propeptide and YPEB domain 58 114 7.9E-6 T 22-04-2016 IPR025711 PepSY domain LMES_RS04640 5ff4f296c5984351d7ccd1d259e5bb3b 202 Pfam PF03413 Peptidase propeptide and YPEB domain 140 198 1.7E-8 T 22-04-2016 IPR025711 PepSY domain LMES_RS04870 f017035a24140b8f38575657855d2c37 171 Pfam PF11683 Protein of unknown function (DUF3278) 1 130 1.9E-32 T 22-04-2016 IPR021697 Protein of unknown function DUF3278 LMES_RS06285 b7285fd008320628236ebfaeeb8f73e9 82 Pfam PF02485 Core-2/I-Branching enzyme 2 77 7.6E-6 T 22-04-2016 IPR003406 Glycosyl transferase, family 14 GO:0008375|GO:0016020 LMES_RS07935 49f80ab41d025a11c818c8a4c3100908 160 Pfam PF06081 Aromatic acid exporter family member 1 7 153 8.7E-12 T 22-04-2016 IPR010343 Aromatic acid exporter family member 1 LMES_RS05500 3f787550245ab2db03c6192741781fdd 287 Pfam PF03609 PTS system sorbose-specific iic component 5 254 1.1E-60 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LMES_RS03660 83152cd3f8fbb306f29f11eb1ed4932f 204 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 19 196 2.0E-56 T 22-04-2016 IPR018672 Protein of unknown function DUF2140 LMES_RS02510 66bec0917a0739a7caeaeceaae86190c 245 Pfam PF01183 Glycosyl hydrolases family 25 65 218 4.1E-18 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 LMES_RS02510 66bec0917a0739a7caeaeceaae86190c 245 Gene3D G3DSA:3.20.20.80 54 242 4.2E-28 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LMES_RS02510 66bec0917a0739a7caeaeceaae86190c 245 SUPERFAMILY SSF51445 53 242 8.42E-31 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily LMES_RS07335 6e4a8eb98fe124b07f661d2e8dd8a078 136 Pfam PF06896 Phage tail assembly chaperone proteins, TAC 7 110 1.1E-15 T 22-04-2016 IPR009681 Phage tail assembly chaperone protein, Siphoviridae LMES_RS04190 1319aebaf25ed667f77d4329b84bae20 339 Pfam PF04230 Polysaccharide pyruvyl transferase 33 276 1.4E-24 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase LMES_RS04160 f88b3525eb4d161bb5fd09cda1591682 66 Pfam PF10031 Small integral membrane protein (DUF2273) 8 48 8.5E-12 T 22-04-2016 IPR018730 Protein of unknown function DUF2273 LMES_RS01200 d99294b7e24a501454446e29c9662a8c 216 PANTHER PTHR36834 7 193 1.7E-15 T 22-04-2016 LMES_RS01200 d99294b7e24a501454446e29c9662a8c 216 Pfam PF04892 VanZ like family 60 186 1.9E-14 T 22-04-2016 IPR006976 VanZ-like LMES_RS07470 711089d5d139f482661f9e0625ff40c7 216 Pfam PF04404 ERF superfamily 7 141 1.1E-20 T 22-04-2016 IPR007499 Essential recombination function protein LMES_RS07340 c624390de6aa0f82f65ee93b3b399d29 212 Pfam PF04630 Phage tail tube protein 1 205 4.6E-65 T 22-04-2016 IPR006724 Phage tail tube protein 1 LMES_RS00675 c51eb58f58031b5541ca38d4cd88a9c1 74 Gene3D G3DSA:1.10.260.40 3 55 5.8E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LMES_RS06135 2d3bf9fa0f0ba0469d9412edb75cc502 207 Pfam PF02706 Chain length determinant protein 3 136 1.4E-7 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LMES_RS04380 89d57e54da262c6a78095015e44d5bcc 518 TIGRFAM TIGR03766 TIGR03766: conserved hypothetical integral membrane protein 13 501 6.7E-171 T 22-04-2016 IPR021200 Conserved hypothetical integral membrane protein LMES_RS07350 cf6749bbf0e3eecf0edf6be29889df51 138 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 5 101 1.3E-6 T 22-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component LMES_RS08965 bf4b2fb33499899a4f32cbbe5014bf21 95 Pfam PF08951 Enterocin A Immunity 4 72 2.5E-15 T 22-04-2016 IPR015046 Enterocin A Immunity LMES_RS06475 a39675829a3c0ce28045831d707cc07b 179 SUPERFAMILY SSF54518 2 152 1.67E-14 T 22-04-2016 IPR025659 Tubby C-terminal-like domain