locus-tag class description EMK97_RS00010 PF13340 Putative transposase of IS4/5 family (DUF4096) EMK97_RS00015 PF01926 50S ribosome-binding GTPase EMK97_RS00025 PF01053 Cys/Met metabolism PLP-dependent enzyme EMK97_RS00030 PF00158 Sigma-54 interaction domain EMK97_RS00030 PF18024 Helix-turn-helix domain EMK97_RS00035 PF00069 Protein kinase domain EMK97_RS00040 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00040 PF00563 EAL domain EMK97_RS00040 PF01590 GAF domain EMK97_RS00040 PF00360 Phytochrome region EMK97_RS00045 PF04055 Radical SAM superfamily EMK97_RS00045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family EMK97_RS00050 PF03099 Biotin/lipoate A/B protein ligase family EMK97_RS00055 PF04359 Protein of unknown function (DUF493) EMK97_RS00065 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS00070 PF02600 Disulfide bond formation protein DsbB EMK97_RS00075 PF03600 Citrate transporter EMK97_RS00080 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS00080 PF07840 FadR C-terminal domain EMK97_RS00085 PF04293 SpoVR like protein EMK97_RS00090 PF04285 Protein of unknown function (DUF444) EMK97_RS00095 PF06798 PrkA serine protein kinase C-terminal domain EMK97_RS00095 PF08298 PrkA AAA domain EMK97_RS00100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain EMK97_RS00100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain EMK97_RS00105 PF00462 Glutaredoxin EMK97_RS00110 PF10417 C-terminal domain of 1-Cys peroxiredoxin EMK97_RS00110 PF00578 AhpC/TSA family EMK97_RS00115 PF00929 Exonuclease EMK97_RS00120 PF18393 MotY N-terminal domain EMK97_RS00120 PF00691 OmpA family EMK97_RS00125 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00125 PF17151 Periplasmic sensor domain EMK97_RS00130 PF17158 Membrane-associated sensor, integral membrane domain EMK97_RS00130 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00155 PF04354 ZipA, C-terminal FtsZ-binding domain EMK97_RS00160 PF12826 Helix-hairpin-helix motif EMK97_RS00160 PF03120 NAD-dependent DNA ligase OB-fold domain EMK97_RS00160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EMK97_RS00160 PF01653 NAD-dependent DNA ligase adenylation domain EMK97_RS00160 PF00533 BRCA1 C Terminus (BRCT) domain EMK97_RS00175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS00175 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EMK97_RS00185 PF01113 Dihydrodipicolinate reductase, N-terminus EMK97_RS00185 PF05173 Dihydrodipicolinate reductase, C-terminus EMK97_RS00190 PF00117 Glutamine amidotransferase class-I EMK97_RS00190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EMK97_RS00195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EMK97_RS00195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EMK97_RS00195 PF02142 MGS-like domain EMK97_RS00200 PF03449 Transcription elongation factor, N-terminal EMK97_RS00200 PF01272 Transcription elongation factor, GreA/GreB, C-term EMK97_RS00205 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00205 PF01590 GAF domain EMK97_RS00205 PF00360 Phytochrome region EMK97_RS00205 PF00563 EAL domain EMK97_RS00230 PF00082 Subtilase family EMK97_RS00230 PF04151 Bacterial pre-peptidase C-terminal domain EMK97_RS00235 PF01985 CRS1 / YhbY (CRM) domain EMK97_RS00240 PF01728 FtsJ-like methyltransferase EMK97_RS00245 PF06480 FtsH Extracellular EMK97_RS00245 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS00245 PF01434 Peptidase family M41 EMK97_RS00245 PF17862 AAA+ lid domain EMK97_RS00250 PF00809 Pterin binding enzyme EMK97_RS00255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EMK97_RS00255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EMK97_RS00255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EMK97_RS00255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EMK97_RS00260 PF00121 Triosephosphate isomerase EMK97_RS00265 PF03840 Preprotein translocase SecG subunit EMK97_RS00275 PF08447 PAS fold EMK97_RS00275 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00275 PF00563 EAL domain EMK97_RS00275 PF05231 MASE1 EMK97_RS00275 PF13426 PAS domain EMK97_RS00275 PF08448 PAS fold EMK97_RS00285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS00285 PF03466 LysR substrate binding domain EMK97_RS00290 PF08443 RimK-like ATP-grasp domain EMK97_RS00290 PF18030 RimK PreATP-grasp domain EMK97_RS00300 PF18030 RimK PreATP-grasp domain EMK97_RS00300 PF08443 RimK-like ATP-grasp domain EMK97_RS00305 PF12794 Mechanosensitive ion channel inner membrane domain 1 EMK97_RS00305 PF00924 Mechanosensitive ion channel EMK97_RS00305 PF12795 Mechanosensitive ion channel porin domain EMK97_RS00310 PF01544 CorA-like Mg2+ transporter protein EMK97_RS00320 PF13580 SIS domain EMK97_RS00325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EMK97_RS00325 PF13378 Enolase C-terminal domain-like EMK97_RS00335 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00335 PF13185 GAF domain EMK97_RS00335 PF00563 EAL domain EMK97_RS00345 PF17200 Single Cache domain 2 EMK97_RS00345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS00345 PF00672 HAMP domain EMK97_RS00355 PF01966 HD domain EMK97_RS00355 PF13286 Phosphohydrolase-associated domain EMK97_RS00360 PF08003 Protein of unknown function (DUF1698) EMK97_RS00365 PF13649 Methyltransferase domain EMK97_RS00370 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00370 PF00563 EAL domain EMK97_RS00370 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS00375 PF01336 OB-fold nucleic acid binding domain EMK97_RS00375 PF00152 tRNA synthetases class II (D, K and N) EMK97_RS00375 PF02938 GAD domain EMK97_RS00380 PF02075 Crossover junction endodeoxyribonuclease RuvC EMK97_RS00385 PF01330 RuvA N terminal domain EMK97_RS00385 PF07499 RuvA, C-terminal domain EMK97_RS00390 PF05491 RuvB C-terminal winged helix domain EMK97_RS00390 PF05496 Holliday junction DNA helicase RuvB P-loop domain EMK97_RS00390 PF17864 RuvB AAA lid domain EMK97_RS00400 PF03772 Competence protein EMK97_RS00400 PF13567 Domain of unknown function (DUF4131) EMK97_RS00400 PF00753 Metallo-beta-lactamase superfamily EMK97_RS00405 PF00664 ABC transporter transmembrane region EMK97_RS00405 PF00005 ABC transporter EMK97_RS00410 PF02606 Tetraacyldisaccharide-1-P 4'-kinase EMK97_RS00415 PF03966 Trm112p-like protein EMK97_RS00420 PF02348 Cytidylyltransferase EMK97_RS00425 PF02036 SCP-2 sterol transfer family EMK97_RS00430 PF01136 Peptidase family U32 EMK97_RS00435 PF01136 Peptidase family U32 EMK97_RS00440 PF08007 Cupin superfamily protein EMK97_RS00455 PF01479 S4 domain EMK97_RS00455 PF00849 RNA pseudouridylate synthase EMK97_RS00470 PF13340 Putative transposase of IS4/5 family (DUF4096) EMK97_RS00475 PF02423 Ornithine cyclodeaminase/mu-crystallin family EMK97_RS00480 PF00557 Metallopeptidase family M24 EMK97_RS00480 PF01321 Creatinase/Prolidase N-terminal domain EMK97_RS00485 PF05544 Proline racemase EMK97_RS00490 PF00854 POT family EMK97_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS00500 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS00500 PF00497 Bacterial extracellular solute-binding proteins, family 3 EMK97_RS00515 PF03461 TRCF domain EMK97_RS00515 PF02559 CarD-like/TRCF domain EMK97_RS00515 PF17757 UvrB interaction domain EMK97_RS00515 PF00271 Helicase conserved C-terminal domain EMK97_RS00515 PF00270 DEAD/DEAH box helicase EMK97_RS00530 PF01507 Phosphoadenosine phosphosulfate reductase family EMK97_RS00535 PF00009 Elongation factor Tu GTP binding domain EMK97_RS00540 PF03600 Citrate transporter EMK97_RS00540 PF02080 TrkA-C domain EMK97_RS00555 PF16363 GDP-mannose 4,6 dehydratase EMK97_RS00565 PF08668 HDOD domain EMK97_RS00565 PF00563 EAL domain EMK97_RS00570 PF00474 Sodium:solute symporter family EMK97_RS00580 PF11849 Domain of unknown function (DUF3369) EMK97_RS00600 PF01925 Sulfite exporter TauE/SafE EMK97_RS00610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS00610 PF03466 LysR substrate binding domain EMK97_RS00625 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain EMK97_RS00625 PF01464 Transglycosylase SLT domain EMK97_RS00635 PF03167 Uracil DNA glycosylase superfamily EMK97_RS00645 PF00478 IMP dehydrogenase / GMP reductase domain EMK97_RS00645 PF00571 CBS domain EMK97_RS00650 PF11898 Domain of unknown function (DUF3418) EMK97_RS00650 PF04408 Helicase associated domain (HA2) EMK97_RS00650 PF00270 DEAD/DEAH box helicase EMK97_RS00650 PF00271 Helicase conserved C-terminal domain EMK97_RS00650 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold EMK97_RS00660 PF17785 PUA-like domain EMK97_RS00660 PF10672 S-adenosylmethionine-dependent methyltransferase EMK97_RS00665 PF00708 Acylphosphatase EMK97_RS00680 PF00291 Pyridoxal-phosphate dependent enzyme EMK97_RS00710 PF00929 Exonuclease EMK97_RS00740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS00740 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS00740 PF12806 Acetyl-CoA dehydrogenase C-terminal like EMK97_RS00740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS00750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS00750 PF09317 Domain of unknown function (DUF1974) EMK97_RS00750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS00750 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS00755 PF13230 Glutamine amidotransferases class-II EMK97_RS00760 PF05971 RNA methyltransferase EMK97_RS00775 PF02743 Cache domain EMK97_RS00775 PF00672 HAMP domain EMK97_RS00775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS00790 PF01212 Beta-eliminating lyase EMK97_RS00795 PF00589 Phage integrase family EMK97_RS00840 PF01554 MatE EMK97_RS00850 PF03881 Fructosamine kinase EMK97_RS00855 PF11953 Domain of unknown function (DUF3470) EMK97_RS00855 PF00037 4Fe-4S binding domain EMK97_RS00870 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS00870 PF00563 EAL domain EMK97_RS00870 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS00875 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EMK97_RS00875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EMK97_RS00875 PF02824 TGS domain EMK97_RS00875 PF03129 Anticodon binding domain EMK97_RS00880 PF00707 Translation initiation factor IF-3, C-terminal domain EMK97_RS00880 PF05198 Translation initiation factor IF-3, N-terminal domain EMK97_RS00885 PF01632 Ribosomal protein L35 EMK97_RS00890 PF00453 Ribosomal protein L20 EMK97_RS00895 PF01259 SAICAR synthetase EMK97_RS00915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EMK97_RS00915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EMK97_RS00930 PF08328 Adenylosuccinate lyase C-terminal EMK97_RS00930 PF00206 Lyase EMK97_RS00935 PF04356 Protein of unknown function (DUF489) EMK97_RS00945 PF00849 RNA pseudouridylate synthase EMK97_RS00950 PF03971 Monomeric isocitrate dehydrogenase EMK97_RS00955 PF00180 Isocitrate/isopropylmalate dehydrogenase EMK97_RS00960 PF00313 'Cold-shock' DNA-binding domain EMK97_RS00965 PF02617 ATP-dependent Clp protease adaptor protein ClpS EMK97_RS00970 PF02861 Clp amino terminal domain, pathogenicity island component EMK97_RS00970 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS00970 PF17871 AAA lid domain EMK97_RS00970 PF10431 C-terminal, D2-small domain, of ClpB protein EMK97_RS00970 PF07724 AAA domain (Cdc48 subfamily) EMK97_RS00975 PF02321 Outer membrane efflux protein EMK97_RS00985 PF00873 AcrB/AcrD/AcrF family EMK97_RS01005 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation EMK97_RS01005 PF10566 Glycoside hydrolase 97 EMK97_RS01005 PF14508 Glycosyl-hydrolase 97 N-terminal EMK97_RS01010 PF01053 Cys/Met metabolism PLP-dependent enzyme EMK97_RS01015 PF01554 MatE EMK97_RS01020 PF00271 Helicase conserved C-terminal domain EMK97_RS01020 PF02151 UvrB/uvrC motif EMK97_RS01020 PF12344 Ultra-violet resistance protein B EMK97_RS01020 PF17757 UvrB interaction domain EMK97_RS01020 PF04851 Type III restriction enzyme, res subunit EMK97_RS01030 PF00520 Ion transport protein EMK97_RS01030 PF00027 Cyclic nucleotide-binding domain EMK97_RS01035 PF06508 Queuosine biosynthesis protein QueC EMK97_RS01040 PF04055 Radical SAM superfamily EMK97_RS01050 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS01055 PF01168 Alanine racemase, N-terminal domain EMK97_RS01055 PF00842 Alanine racemase, C-terminal domain EMK97_RS01060 PF00144 Beta-lactamase EMK97_RS01080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS01080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EMK97_RS01105 PF01551 Peptidase family M23 EMK97_RS01110 PF01268 Formate--tetrahydrofolate ligase EMK97_RS01120 PF02634 FdhD/NarQ family EMK97_RS01125 PF10531 SLBB domain EMK97_RS01125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region EMK97_RS01125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EMK97_RS01130 PF12838 4Fe-4S dicluster domain EMK97_RS01130 PF00384 Molybdopterin oxidoreductase EMK97_RS01130 PF01568 Molydopterin dinucleotide binding domain EMK97_RS01130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EMK97_RS01130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EMK97_RS01265 PF00664 ABC transporter transmembrane region EMK97_RS01265 PF00005 ABC transporter EMK97_RS01285 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EMK97_RS01290 PF01171 PP-loop family EMK97_RS01295 PF00582 Universal stress protein family EMK97_RS01300 PF13545 Crp-like helix-turn-helix domain EMK97_RS01300 PF00027 Cyclic nucleotide-binding domain EMK97_RS01315 PF00403 Heavy-metal-associated domain EMK97_RS01325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EMK97_RS01325 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP EMK97_RS01340 PF00115 Cytochrome C and Quinol oxidase polypeptide I EMK97_RS01345 PF13545 Crp-like helix-turn-helix domain EMK97_RS01345 PF00027 Cyclic nucleotide-binding domain EMK97_RS01355 PF01476 LysM domain EMK97_RS01355 PF01464 Transglycosylase SLT domain EMK97_RS01360 PF16123 Hydroxyacylglutathione hydrolase C-terminus EMK97_RS01360 PF00753 Metallo-beta-lactamase superfamily EMK97_RS01365 PF08241 Methyltransferase domain EMK97_RS01370 PF01784 NIF3 (NGG1p interacting factor 3) EMK97_RS01375 PF02698 DUF218 domain EMK97_RS01385 PF01752 Collagenase EMK97_RS01385 PF04151 Bacterial pre-peptidase C-terminal domain EMK97_RS01385 PF08453 Peptidase family M9 N-terminal EMK97_RS01390 PF01842 ACT domain EMK97_RS01390 PF00696 Amino acid kinase family EMK97_RS01395 PF00255 Glutathione peroxidase EMK97_RS01400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EMK97_RS01400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EMK97_RS01405 PF02743 Cache domain EMK97_RS01405 PF00672 HAMP domain EMK97_RS01405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS01410 PF00939 Sodium:sulfate symporter transmembrane region EMK97_RS01420 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS01420 PF02743 Cache domain EMK97_RS01425 PF00158 Sigma-54 interaction domain EMK97_RS01425 PF00072 Response regulator receiver domain EMK97_RS01425 PF02954 Bacterial regulatory protein, Fis family EMK97_RS01430 PF08411 Exonuclease C-terminal EMK97_RS01430 PF00929 Exonuclease EMK97_RS01435 PF00571 CBS domain EMK97_RS01435 PF01595 Cyclin M transmembrane N-terminal domain EMK97_RS01450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EMK97_RS01470 PF00072 Response regulator receiver domain EMK97_RS01470 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS01475 PF08918 PhoQ Sensor EMK97_RS01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS01480 PF11737 Protein of unknown function (DUF3300) EMK97_RS01505 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS01505 PF13755 Sensor N-terminal transmembrane domain EMK97_RS01505 PF13756 Stimulus-sensing domain EMK97_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS01505 PF00672 HAMP domain EMK97_RS01510 PF00072 Response regulator receiver domain EMK97_RS01510 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS01540 PF13307 Helicase C-terminal domain EMK97_RS01540 PF06733 DEAD_2 EMK97_RS01545 PF03104 DNA polymerase family B, exonuclease domain EMK97_RS01545 PF00136 DNA polymerase family B EMK97_RS01550 PF01053 Cys/Met metabolism PLP-dependent enzyme EMK97_RS01560 PF01230 HIT domain EMK97_RS01565 PF07694 5TMR of 5TMR-LYT EMK97_RS01565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS01565 PF06580 Histidine kinase EMK97_RS01570 PF00072 Response regulator receiver domain EMK97_RS01570 PF04397 LytTr DNA-binding domain EMK97_RS01575 PF02887 Pyruvate kinase, alpha/beta domain EMK97_RS01575 PF00224 Pyruvate kinase, barrel domain EMK97_RS01580 PF01380 SIS domain EMK97_RS01580 PF01418 Helix-turn-helix domain, rpiR family EMK97_RS01585 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EMK97_RS01585 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EMK97_RS01590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EMK97_RS01595 PF00920 Dehydratase family EMK97_RS01600 PF01081 KDPG and KHG aldolase EMK97_RS01615 PF10150 Ribonuclease E/G family EMK97_RS01615 PF00575 S1 RNA binding domain EMK97_RS01615 PF12111 Polyribonucleotide phosphorylase C terminal EMK97_RS01620 PF01479 S4 domain EMK97_RS01620 PF00849 RNA pseudouridylate synthase EMK97_RS01625 PF02545 Maf-like protein EMK97_RS01630 PF02620 Large ribosomal RNA subunit accumulation protein YceD EMK97_RS01635 PF01783 Ribosomal L32p protein family EMK97_RS01640 PF02504 Fatty acid synthesis protein EMK97_RS01645 PF00698 Acyl transferase domain EMK97_RS01655 PF00550 Phosphopantetheine attachment site EMK97_RS01660 PF00109 Beta-ketoacyl synthase, N-terminal domain EMK97_RS01660 PF02801 Beta-ketoacyl synthase, C-terminal domain EMK97_RS01665 PF01063 Amino-transferase class IV EMK97_RS01670 PF02618 YceG-like family EMK97_RS01675 PF02223 Thymidylate kinase EMK97_RS01680 PF09115 DNA polymerase III, delta subunit, C terminal EMK97_RS01690 PF01026 TatD related DNase EMK97_RS01695 PF00999 Sodium/hydrogen exchanger family EMK97_RS01700 PF13472 GDSL-like Lipase/Acylhydrolase family EMK97_RS01705 PF00005 ABC transporter EMK97_RS01725 PF01594 AI-2E family transporter EMK97_RS01735 PF03795 YCII-related domain EMK97_RS01740 PF04279 Intracellular septation protein A EMK97_RS01745 PF00557 Metallopeptidase family M24 EMK97_RS01745 PF01321 Creatinase/Prolidase N-terminal domain EMK97_RS01750 PF08406 CbbQ/NirQ/NorQ C-terminal EMK97_RS01750 PF07728 AAA domain (dynein-related subfamily) EMK97_RS01755 PF00510 Cytochrome c oxidase subunit III EMK97_RS01785 PF00072 Response regulator receiver domain EMK97_RS01790 PF02895 Signal transducing histidine kinase, homodimeric domain EMK97_RS01790 PF09078 CheY binding EMK97_RS01790 PF01627 Hpt domain EMK97_RS01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS01790 PF01584 CheW-like domain EMK97_RS01795 PF01584 CheW-like domain EMK97_RS01800 PF01584 CheW-like domain EMK97_RS01805 PF02203 Tar ligand binding domain homologue EMK97_RS01805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS01805 PF00672 HAMP domain EMK97_RS01810 PF03705 CheR methyltransferase, all-alpha domain EMK97_RS01810 PF01739 CheR methyltransferase, SAM binding domain EMK97_RS01815 PF03975 CheD chemotactic sensory transduction EMK97_RS01820 PF00072 Response regulator receiver domain EMK97_RS01820 PF01339 CheB methylesterase EMK97_RS01825 PF02743 Cache domain EMK97_RS01825 PF00672 HAMP domain EMK97_RS01825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS01830 PF13466 STAS domain EMK97_RS01835 PF00072 Response regulator receiver domain EMK97_RS01840 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS01840 PF00072 Response regulator receiver domain EMK97_RS01845 PF08448 PAS fold EMK97_RS01845 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS01845 PF13188 PAS domain EMK97_RS01845 PF00072 Response regulator receiver domain EMK97_RS01850 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS01850 PF07694 5TMR of 5TMR-LYT EMK97_RS01855 PF00970 Oxidoreductase FAD-binding domain EMK97_RS01855 PF00175 Oxidoreductase NAD-binding domain EMK97_RS01855 PF00111 2Fe-2S iron-sulfur cluster binding domain EMK97_RS01860 PF00268 Ribonucleotide reductase, small chain EMK97_RS01865 PF03477 ATP cone domain EMK97_RS01865 PF00317 Ribonucleotide reductase, all-alpha domain EMK97_RS01865 PF02867 Ribonucleotide reductase, barrel domain EMK97_RS01875 PF00521 DNA gyrase/topoisomerase IV, subunit A EMK97_RS01875 PF03989 DNA gyrase C-terminal domain, beta-propeller EMK97_RS01880 PF00266 Aminotransferase class-V EMK97_RS01885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EMK97_RS01890 PF02224 Cytidylate kinase EMK97_RS01895 PF00575 S1 RNA binding domain EMK97_RS01900 PF00216 Bacterial DNA-binding protein EMK97_RS01910 PF18073 Rubredoxin metal binding domain EMK97_RS01915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EMK97_RS01920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EMK97_RS01920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EMK97_RS01925 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EMK97_RS01925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EMK97_RS01930 PF01641 SelR domain EMK97_RS01940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EMK97_RS01940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EMK97_RS01950 PF04358 DsrC like protein EMK97_RS01960 PF02635 DsrE/DsrF-like family EMK97_RS01965 PF02635 DsrE/DsrF-like family EMK97_RS01970 PF01027 Inhibitor of apoptosis-promoting Bax1 EMK97_RS01975 PF13302 Acetyltransferase (GNAT) domain EMK97_RS01975 PF00958 GMP synthase C terminal domain EMK97_RS01975 PF00117 Glutamine amidotransferase class-I EMK97_RS01975 PF03352 Methyladenine glycosylase EMK97_RS01975 PF13673 Acetyltransferase (GNAT) domain EMK97_RS01985 PF13340 Putative transposase of IS4/5 family (DUF4096) EMK97_RS02020 PF07237 Protein of unknown function (DUF1428) EMK97_RS02025 PF17151 Periplasmic sensor domain EMK97_RS02025 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS02080 PF01979 Amidohydrolase family EMK97_RS02085 PF04245 37-kD nucleoid-associated bacterial protein EMK97_RS02090 PF07208 Protein of unknown function (DUF1414) EMK97_RS02220 PF13495 Phage integrase, N-terminal SAM-like domain EMK97_RS02220 PF00589 Phage integrase family EMK97_RS02225 PF03781 Sulfatase-modifying factor enzyme 1 EMK97_RS02240 PF08241 Methyltransferase domain EMK97_RS02240 PF12697 Alpha/beta hydrolase family EMK97_RS02245 PF00155 Aminotransferase class I and II EMK97_RS02250 PF04055 Radical SAM superfamily EMK97_RS02250 PF06968 Biotin and Thiamin Synthesis associated domain EMK97_RS02255 PF00202 Aminotransferase class-III EMK97_RS02265 PF01336 OB-fold nucleic acid binding domain EMK97_RS02265 PF00152 tRNA synthetases class II (D, K and N) EMK97_RS02270 PF00881 Nitroreductase family EMK97_RS02275 PF00892 EamA-like transporter family EMK97_RS02285 PF01343 Peptidase family S49 EMK97_RS02290 PF00710 Asparaginase, N-terminal EMK97_RS02290 PF17763 Glutaminase/Asparaginase C-terminal domain EMK97_RS02325 PF01235 Sodium:alanine symporter family EMK97_RS02330 PF00246 Zinc carboxypeptidase EMK97_RS02330 PF18027 Cytosolic carboxypeptidase N-terminal domain EMK97_RS02340 PF02403 Seryl-tRNA synthetase N-terminal domain EMK97_RS02340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EMK97_RS02345 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EMK97_RS02350 PF12002 MgsA AAA+ ATPase C terminal EMK97_RS02350 PF16193 AAA C-terminal domain EMK97_RS02350 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS02355 PF03548 Outer membrane lipoprotein carrier protein LolA EMK97_RS02360 PF01580 FtsK/SpoIIIE family EMK97_RS02360 PF09397 Ftsk gamma domain EMK97_RS02360 PF17854 FtsK alpha domain EMK97_RS02360 PF13491 4TM region of DNA translocase FtsK/SpoIIIE EMK97_RS02370 PF01037 Lrp/AsnC ligand binding domain EMK97_RS02375 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EMK97_RS02375 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EMK97_RS02380 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS02385 PF03588 Leucyl/phenylalanyl-tRNA protein transferase EMK97_RS02390 PF04376 Arginine-tRNA-protein transferase, N terminus EMK97_RS02390 PF04377 Arginine-tRNA-protein transferase, C terminus EMK97_RS02395 PF01176 Translation initiation factor 1A / IF-1 EMK97_RS02425 PF13538 UvrD-like helicase C-terminal domain EMK97_RS02430 PF12705 PD-(D/E)XK nuclease superfamily EMK97_RS02430 PF00580 UvrD/REP helicase N-terminal domain EMK97_RS02430 PF13361 UvrD-like helicase C-terminal domain EMK97_RS02435 PF17946 RecC C-terminal domain EMK97_RS02445 PF11992 Domain of unknown function (DUF3488) EMK97_RS02445 PF13559 Domain of unknown function (DUF4129) EMK97_RS02445 PF01841 Transglutaminase-like superfamily EMK97_RS02455 PF17863 AAA lid domain EMK97_RS02455 PF07726 ATPase family associated with various cellular activities (AAA) EMK97_RS02460 PF00793 DAHP synthetase I family EMK97_RS02475 PF02424 ApbE family EMK97_RS02490 PF13537 Glutamine amidotransferase domain EMK97_RS02490 PF00733 Asparagine synthase EMK97_RS02505 PF01180 Dihydroorotate dehydrogenase EMK97_RS02510 PF05088 Bacterial NAD-glutamate dehydrogenase EMK97_RS02525 PF07044 Protein of unknown function (DUF1329) EMK97_RS02540 PF11940 Domain of unknown function (DUF3458) Ig-like fold EMK97_RS02540 PF17432 Domain of unknown function (DUF3458_C) ARM repeats EMK97_RS02540 PF01433 Peptidase family M1 domain EMK97_RS02545 PF03553 Na+/H+ antiporter family EMK97_RS02550 PF00595 PDZ domain EMK97_RS02550 PF03572 Peptidase family S41 EMK97_RS02550 PF11818 C-terminal domain of tail specific protease (DUF3340) EMK97_RS02550 PF17804 Tail specific protease N-terminal domain EMK97_RS02555 PF17516 ProQ C-terminal domain EMK97_RS02555 PF04352 ProQ/FINO family EMK97_RS02565 PF13185 GAF domain EMK97_RS02580 PF04303 PrpF protein EMK97_RS02585 PF00694 Aconitase C-terminal domain EMK97_RS02585 PF00330 Aconitase family (aconitate hydratase) EMK97_RS02590 PF00285 Citrate synthase, C-terminal domain EMK97_RS02600 PF07729 FCD domain EMK97_RS02600 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS02630 PF01933 Uncharacterised protein family UPF0052 EMK97_RS02640 PF00692 dUTPase EMK97_RS02645 PF10609 NUBPL iron-transfer P-loop NTPase EMK97_RS02650 PF01588 Putative tRNA binding domain EMK97_RS02650 PF09334 tRNA synthetases class I (M) EMK97_RS02655 PF00375 Sodium:dicarboxylate symporter family EMK97_RS02665 PF18389 TrmO C-terminal domain EMK97_RS02665 PF01980 tRNA-methyltransferase O EMK97_RS02675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS02685 PF13476 AAA domain EMK97_RS02690 PF12320 Type 5 capsule protein repressor C-terminal domain EMK97_RS02690 PF00149 Calcineurin-like phosphoesterase EMK97_RS02700 PF03466 LysR substrate binding domain EMK97_RS02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS02725 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS02740 PF03992 Antibiotic biosynthesis monooxygenase EMK97_RS02750 PF00043 Glutathione S-transferase, C-terminal domain EMK97_RS02750 PF13417 Glutathione S-transferase, N-terminal domain EMK97_RS02800 PF11742 Protein of unknown function (DUF3302) EMK97_RS02805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS02805 PF00529 HlyD membrane-fusion protein of T1SS EMK97_RS02810 PF00216 Bacterial DNA-binding protein EMK97_RS02815 PF01588 Putative tRNA binding domain EMK97_RS02815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EMK97_RS02815 PF03484 tRNA synthetase B5 domain EMK97_RS02815 PF03147 Ferredoxin-fold anticodon binding domain EMK97_RS02815 PF03483 B3/4 domain EMK97_RS02820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EMK97_RS02820 PF01409 tRNA synthetases class II core domain (F) EMK97_RS02840 PF09330 D-lactate dehydrogenase, membrane binding EMK97_RS02840 PF01565 FAD binding domain EMK97_RS02845 PF00391 PEP-utilising enzyme, mobile domain EMK97_RS02845 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EMK97_RS02845 PF02896 PEP-utilising enzyme, TIM barrel domain EMK97_RS02850 PF03618 Kinase/pyrophosphorylase EMK97_RS02855 PF00793 DAHP synthetase I family EMK97_RS02860 PF01451 Low molecular weight phosphotyrosine protein phosphatase EMK97_RS02875 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS02875 PF00672 HAMP domain EMK97_RS02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS02880 PF13478 XdhC Rossmann domain EMK97_RS02880 PF02625 XdhC and CoxI family EMK97_RS02890 PF01799 [2Fe-2S] binding domain EMK97_RS02890 PF00111 2Fe-2S iron-sulfur cluster binding domain EMK97_RS02895 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase EMK97_RS02915 PF01694 Rhomboid family EMK97_RS02920 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EMK97_RS02920 PF00326 Prolyl oligopeptidase family EMK97_RS02925 PF02810 SEC-C motif EMK97_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS02935 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS02935 PF00672 HAMP domain EMK97_RS02940 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS02940 PF00072 Response regulator receiver domain EMK97_RS02945 PF03372 Endonuclease/Exonuclease/phosphatase family EMK97_RS02950 PF13847 Methyltransferase domain EMK97_RS02970 PF00871 Acetokinase family EMK97_RS02975 PF01515 Phosphate acetyl/butaryl transferase EMK97_RS02975 PF07085 DRTGG domain EMK97_RS02985 PF03960 ArsC family EMK97_RS02990 PF07687 Peptidase dimerisation domain EMK97_RS02990 PF01546 Peptidase family M20/M25/M40 EMK97_RS03015 PF01842 ACT domain EMK97_RS03040 PF00578 AhpC/TSA family EMK97_RS03060 PF04411 PD-(D/E)XK nuclease superfamily EMK97_RS03070 PF11867 Domain of unknown function (DUF3387) EMK97_RS03070 PF18766 SWI2/SNF2 ATPase EMK97_RS03070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EMK97_RS03080 PF00069 Protein kinase domain EMK97_RS03090 PF01420 Type I restriction modification DNA specificity domain EMK97_RS03095 PF02384 N-6 DNA Methylase EMK97_RS03105 PF13195 Protein of unknown function (DUF4011) EMK97_RS03105 PF13087 AAA domain EMK97_RS03105 PF13086 AAA domain EMK97_RS03105 PF13087 AAA domain EMK97_RS03105 PF13195 Protein of unknown function (DUF4011) EMK97_RS03105 PF13086 AAA domain EMK97_RS03125 PF02142 MGS-like domain EMK97_RS03135 PF00034 Cytochrome c EMK97_RS03135 PF03150 Di-haem cytochrome c peroxidase EMK97_RS03140 PF01594 AI-2E family transporter EMK97_RS03155 PF01435 Peptidase family M48 EMK97_RS03155 PF13181 Tetratricopeptide repeat EMK97_RS03160 PF03960 ArsC family EMK97_RS03175 PF00308 Bacterial dnaA protein EMK97_RS03185 PF00586 AIR synthase related protein, N-terminal domain EMK97_RS03185 PF02769 AIR synthase related protein, C-terminal domain EMK97_RS03190 PF00551 Formyl transferase EMK97_RS03205 PF14535 AMP-binding enzyme C-terminal domain EMK97_RS03205 PF00501 AMP-binding enzyme EMK97_RS03210 PF00005 ABC transporter EMK97_RS03225 PF02653 Branched-chain amino acid transport system / permease component EMK97_RS03235 PF12399 Branched-chain amino acid ATP-binding cassette transporter EMK97_RS03235 PF00005 ABC transporter EMK97_RS03245 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS03245 PF00582 Universal stress protein family EMK97_RS03245 PF02702 Osmosensitive K+ channel His kinase sensor domain EMK97_RS03245 PF13493 Domain of unknown function (DUF4118) EMK97_RS03250 PF00196 Bacterial regulatory proteins, luxR family EMK97_RS03250 PF00072 Response regulator receiver domain EMK97_RS03260 PF00563 EAL domain EMK97_RS03260 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS03260 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS03285 PF00069 Protein kinase domain EMK97_RS03285 PF03793 PASTA domain EMK97_RS03295 PF01433 Peptidase family M1 domain EMK97_RS03315 PF11842 Domain of unknown function (DUF3362) EMK97_RS03315 PF04055 Radical SAM superfamily EMK97_RS03315 PF08497 Radical SAM N-terminal EMK97_RS03320 PF00005 ABC transporter EMK97_RS03320 PF12848 ABC transporter EMK97_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS03335 PF00672 HAMP domain EMK97_RS03335 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS03335 PF00989 PAS fold EMK97_RS03335 PF18698 Histidine kinase sensor domain EMK97_RS03360 PF13495 Phage integrase, N-terminal SAM-like domain EMK97_RS03360 PF00589 Phage integrase family EMK97_RS03380 PF13006 Insertion element 4 transposase N-terminal EMK97_RS03380 PF01609 Transposase DDE domain EMK97_RS03450 PF03734 L,D-transpeptidase catalytic domain EMK97_RS03465 PF02627 Carboxymuconolactone decarboxylase family EMK97_RS03500 PF01161 Phosphatidylethanolamine-binding protein EMK97_RS03505 PF00271 Helicase conserved C-terminal domain EMK97_RS03505 PF00270 DEAD/DEAH box helicase EMK97_RS03515 PF00749 tRNA synthetases class I (E and Q), catalytic domain EMK97_RS03545 PF00591 Glycosyl transferase family, a/b domain EMK97_RS03545 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EMK97_RS03545 PF02885 Glycosyl transferase family, helical bundle domain EMK97_RS03570 PF04073 Aminoacyl-tRNA editing domain EMK97_RS03570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EMK97_RS03570 PF03129 Anticodon binding domain EMK97_RS03575 PF00155 Aminotransferase class I and II EMK97_RS03580 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EMK97_RS03580 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EMK97_RS03585 PF03264 NapC/NirT cytochrome c family, N-terminal region EMK97_RS03590 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) EMK97_RS03595 PF12801 4Fe-4S binding domain EMK97_RS03595 PF13237 4Fe-4S dicluster domain EMK97_RS03600 PF12800 4Fe-4S binding domain EMK97_RS03600 PF12838 4Fe-4S dicluster domain EMK97_RS03605 PF00384 Molybdopterin oxidoreductase EMK97_RS03605 PF01568 Molydopterin dinucleotide binding domain EMK97_RS03605 PF10518 TAT (twin-arginine translocation) pathway signal sequence EMK97_RS03605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EMK97_RS03620 PF13187 4Fe-4S dicluster domain EMK97_RS03620 PF00037 4Fe-4S binding domain EMK97_RS03620 PF12800 4Fe-4S binding domain EMK97_RS03630 PF08453 Peptidase family M9 N-terminal EMK97_RS03630 PF01752 Collagenase EMK97_RS03730 PF04717 Type VI secretion system, phage-baseplate injector EMK97_RS03730 PF06715 Gp5 C-terminal repeat (3 copies) EMK97_RS03735 PF07724 AAA domain (Cdc48 subfamily) EMK97_RS03735 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS03735 PF17871 AAA lid domain EMK97_RS03735 PF10431 C-terminal, D2-small domain, of ClpB protein EMK97_RS03760 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath EMK97_RS03780 PF14331 ImcF-related N-terminal domain EMK97_RS03780 PF06761 Intracellular multiplication and human macrophage-killing EMK97_RS03780 PF06744 Type VI secretion protein IcmF C-terminal EMK97_RS03890 PF00012 Hsp70 protein EMK97_RS03910 PF02629 CoA binding domain EMK97_RS03910 PF00549 CoA-ligase EMK97_RS03915 PF00549 CoA-ligase EMK97_RS03915 PF08442 ATP-grasp domain EMK97_RS03920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EMK97_RS03920 PF02817 e3 binding domain EMK97_RS03920 PF00364 Biotin-requiring enzyme EMK97_RS03925 PF02779 Transketolase, pyrimidine binding domain EMK97_RS03925 PF00676 Dehydrogenase E1 component EMK97_RS03925 PF16870 2-oxoglutarate dehydrogenase C-terminal EMK97_RS03925 PF16078 2-oxoglutarate dehydrogenase N-terminus EMK97_RS03930 PF13085 2Fe-2S iron-sulfur cluster binding domain EMK97_RS03935 PF00890 FAD binding domain EMK97_RS03935 PF02910 Fumarate reductase flavoprotein C-term EMK97_RS03940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EMK97_RS03945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit EMK97_RS03950 PF00285 Citrate synthase, C-terminal domain EMK97_RS03955 PF00899 ThiF family EMK97_RS03960 PF00266 Aminotransferase class-V EMK97_RS03975 PF13181 Tetratricopeptide repeat EMK97_RS03975 PF07719 Tetratricopeptide repeat EMK97_RS03980 PF00013 KH domain EMK97_RS03980 PF01138 3' exoribonuclease family, domain 1 EMK97_RS03980 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain EMK97_RS03980 PF03725 3' exoribonuclease family, domain 2 EMK97_RS03980 PF00575 S1 RNA binding domain EMK97_RS03985 PF00312 Ribosomal protein S15 EMK97_RS03990 PF09157 Pseudouridine synthase II TruB, C-terminal EMK97_RS03990 PF16198 tRNA pseudouridylate synthase B C-terminal domain EMK97_RS03990 PF01509 TruB family pseudouridylate synthase (N terminal domain) EMK97_RS03995 PF02033 Ribosome-binding factor A EMK97_RS04000 PF11987 Translation-initiation factor 2 EMK97_RS04000 PF04760 Translation initiation factor IF-2, N-terminal region EMK97_RS04000 PF08364 Bacterial translation initiation factor IF-2 associated region EMK97_RS04000 PF00009 Elongation factor Tu GTP binding domain EMK97_RS04005 PF00575 S1 RNA binding domain EMK97_RS04005 PF08529 NusA N-terminal domain EMK97_RS04005 PF13184 NusA-like KH domain EMK97_RS04010 PF17384 RimP C-terminal SH3 domain EMK97_RS04010 PF02576 RimP N-terminal domain EMK97_RS04015 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS04015 PF00989 PAS fold EMK97_RS04015 PF00563 EAL domain EMK97_RS04015 PF01590 GAF domain EMK97_RS04020 PF02508 Rnf-Nqr subunit, membrane protein EMK97_RS04025 PF04060 Putative Fe-S cluster EMK97_RS04030 PF10531 SLBB domain EMK97_RS04030 PF13375 RnfC Barrel sandwich hybrid domain EMK97_RS04030 PF13237 4Fe-4S dicluster domain EMK97_RS04030 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit EMK97_RS04035 PF03116 NQR2, RnfD, RnfE family EMK97_RS04040 PF04205 FMN-binding domain EMK97_RS04045 PF02508 Rnf-Nqr subunit, membrane protein EMK97_RS04050 PF00633 Helix-hairpin-helix motif EMK97_RS04050 PF00730 HhH-GPD superfamily base excision DNA repair protein EMK97_RS04050 PF10576 Iron-sulfur binding domain of endonuclease III EMK97_RS04060 PF00313 'Cold-shock' DNA-binding domain EMK97_RS04065 PF00206 Lyase EMK97_RS04065 PF10415 Fumarase C C-terminus EMK97_RS04070 PF13185 GAF domain EMK97_RS04070 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS04080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EMK97_RS04085 PF00266 Aminotransferase class-V EMK97_RS04090 PF07152 YaeQ protein EMK97_RS04110 PF08453 Peptidase family M9 N-terminal EMK97_RS04110 PF01752 Collagenase EMK97_RS04120 PF02626 Carboxyltransferase domain, subdomain A and B EMK97_RS04125 PF02682 Carboxyltransferase domain, subdomain C and D EMK97_RS04130 PF03746 LamB/YcsF family EMK97_RS04140 PF00873 AcrB/AcrD/AcrF family EMK97_RS04145 PF02253 Phospholipase A1 EMK97_RS04160 PF00211 Adenylate and Guanylate cyclase catalytic domain EMK97_RS04165 PF00072 Response regulator receiver domain EMK97_RS04170 PF04055 Radical SAM superfamily EMK97_RS04170 PF18693 TRAM domain EMK97_RS04170 PF00919 Uncharacterized protein family UPF0004 EMK97_RS04180 PF00672 HAMP domain EMK97_RS04180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS04210 PF03806 AbgT putative transporter family EMK97_RS04235 PF00156 Phosphoribosyl transferase domain EMK97_RS04240 PF17158 Membrane-associated sensor, integral membrane domain EMK97_RS04240 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS04255 PF00962 Adenosine/AMP deaminase EMK97_RS04265 PF01048 Phosphorylase superfamily EMK97_RS04270 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS04270 PF00593 TonB dependent receptor EMK97_RS04275 PF01676 Metalloenzyme superfamily EMK97_RS04280 PF00485 Phosphoribulokinase / Uridine kinase family EMK97_RS04285 PF07670 Nucleoside recognition EMK97_RS04285 PF07662 Na+ dependent nucleoside transporter C-terminus EMK97_RS04285 PF01773 Na+ dependent nucleoside transporter N-terminus EMK97_RS04290 PF01791 DeoC/LacD family aldolase EMK97_RS04295 PF00265 Thymidine kinase EMK97_RS04305 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain EMK97_RS04305 PF00591 Glycosyl transferase family, a/b domain EMK97_RS04305 PF02885 Glycosyl transferase family, helical bundle domain EMK97_RS04310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EMK97_RS04315 PF00593 TonB dependent receptor EMK97_RS04325 PF08362 YcdC-like protein, C-terminal region EMK97_RS04325 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS04335 PF00245 Alkaline phosphatase EMK97_RS04340 PF00156 Phosphoribosyl transferase domain EMK97_RS04345 PF00883 Cytosol aminopeptidase family, catalytic domain EMK97_RS04345 PF02789 Cytosol aminopeptidase family, N-terminal domain EMK97_RS04355 PF04820 Tryptophan halogenase EMK97_RS04360 PF12832 MFS_1 like family EMK97_RS04365 PF01264 Chorismate synthase EMK97_RS04370 PF05175 Methyltransferase small domain EMK97_RS04375 PF01713 Smr domain EMK97_RS04380 PF00300 Histidine phosphatase superfamily (branch 1) EMK97_RS04385 PF05193 Peptidase M16 inactive domain EMK97_RS04385 PF00675 Insulinase (Peptidase family M16) EMK97_RS04390 PF00563 EAL domain EMK97_RS04390 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS04390 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS04405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EMK97_RS04405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EMK97_RS04405 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS04410 PF02803 Thiolase, C-terminal domain EMK97_RS04410 PF00108 Thiolase, N-terminal domain EMK97_RS04415 PF17863 AAA lid domain EMK97_RS04415 PF07726 ATPase family associated with various cellular activities (AAA) EMK97_RS04420 PF01882 Protein of unknown function DUF58 EMK97_RS04435 PF07584 Aerotolerance regulator N-terminal EMK97_RS04435 PF13519 von Willebrand factor type A domain EMK97_RS04445 PF04542 Sigma-70 region 2 EMK97_RS04445 PF08281 Sigma-70, region 4 EMK97_RS04455 PF00205 Thiamine pyrophosphate enzyme, central domain EMK97_RS04455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EMK97_RS04455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EMK97_RS04460 PF10369 Small subunit of acetolactate synthase EMK97_RS04470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain EMK97_RS04470 PF00749 tRNA synthetases class I (E and Q), catalytic domain EMK97_RS04475 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS04475 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS04475 PF00563 EAL domain EMK97_RS04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS04485 PF03466 LysR substrate binding domain EMK97_RS04490 PF00158 Sigma-54 interaction domain EMK97_RS04490 PF00072 Response regulator receiver domain EMK97_RS04495 PF00072 Response regulator receiver domain EMK97_RS04495 PF02954 Bacterial regulatory protein, Fis family EMK97_RS04495 PF00158 Sigma-54 interaction domain EMK97_RS04500 PF08448 PAS fold EMK97_RS04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS04500 PF13188 PAS domain EMK97_RS04500 PF00072 Response regulator receiver domain EMK97_RS04500 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS04505 PF01899 Na+/H+ ion antiporter subunit EMK97_RS04515 PF03334 Na+/H+ antiporter subunit EMK97_RS04525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EMK97_RS04530 PF00361 Proton-conducting membrane transporter EMK97_RS04535 PF00361 Proton-conducting membrane transporter EMK97_RS04545 PF00361 Proton-conducting membrane transporter EMK97_RS04550 PF03193 RsgA GTPase EMK97_RS04595 PF01066 CDP-alcohol phosphatidyltransferase EMK97_RS04600 PF02151 UvrB/uvrC motif EMK97_RS04600 PF08459 UvrC Helix-hairpin-helix N-terminal EMK97_RS04600 PF01541 GIY-YIG catalytic domain EMK97_RS04605 PF00072 Response regulator receiver domain EMK97_RS04605 PF00196 Bacterial regulatory proteins, luxR family EMK97_RS04615 PF07977 FabA-like domain EMK97_RS04620 PF04957 Ribosome modulation factor EMK97_RS04635 PF16326 ABC transporter C-terminal domain EMK97_RS04635 PF00005 ABC transporter EMK97_RS04635 PF12848 ABC transporter EMK97_RS04645 PF01170 Putative RNA methylase family UPF0020 EMK97_RS04645 PF02926 THUMP domain EMK97_RS04645 PF10672 S-adenosylmethionine-dependent methyltransferase EMK97_RS04665 PF01263 Aldose 1-epimerase EMK97_RS04670 PF00474 Sodium:solute symporter family EMK97_RS04675 PF08544 GHMP kinases C terminal EMK97_RS04675 PF00288 GHMP kinases N terminal domain EMK97_RS04675 PF10509 Galactokinase galactose-binding signature EMK97_RS04680 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EMK97_RS04680 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EMK97_RS04685 PF12833 Helix-turn-helix domain EMK97_RS04690 PF02687 FtsX-like permease family EMK97_RS04690 PF12704 MacB-like periplasmic core domain EMK97_RS04695 PF00005 ABC transporter EMK97_RS04700 PF02687 FtsX-like permease family EMK97_RS04700 PF12704 MacB-like periplasmic core domain EMK97_RS04710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS04710 PF08447 PAS fold EMK97_RS04715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS04715 PF00672 HAMP domain EMK97_RS04715 PF02743 Cache domain EMK97_RS04730 PF00484 Carbonic anhydrase EMK97_RS04735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EMK97_RS04750 PF13673 Acetyltransferase (GNAT) domain EMK97_RS04750 PF04229 GrpB protein EMK97_RS04795 PF18766 SWI2/SNF2 ATPase EMK97_RS04795 PF12008 Type I restriction and modification enzyme - subunit R C terminal EMK97_RS04795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) EMK97_RS04805 PF02384 N-6 DNA Methylase EMK97_RS04805 PF12161 HsdM N-terminal domain EMK97_RS04825 PF02445 Quinolinate synthetase A protein EMK97_RS04850 PF13174 Tetratricopeptide repeat EMK97_RS04850 PF16331 TolA binding protein trimerisation EMK97_RS04855 PF00691 OmpA family EMK97_RS04860 PF04052 TolB amino-terminal domain EMK97_RS04860 PF07676 WD40-like Beta Propeller Repeat EMK97_RS04870 PF02472 Biopolymer transport protein ExbD/TolR EMK97_RS04875 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS04880 PF03061 Thioesterase superfamily EMK97_RS04885 PF00271 Helicase conserved C-terminal domain EMK97_RS04885 PF03880 DbpA RNA binding domain EMK97_RS04885 PF12343 Cold shock protein DEAD box A EMK97_RS04885 PF00270 DEAD/DEAH box helicase EMK97_RS04895 PF07676 WD40-like Beta Propeller Repeat EMK97_RS04895 PF00326 Prolyl oligopeptidase family EMK97_RS04900 PF00672 HAMP domain EMK97_RS04900 PF02743 Cache domain EMK97_RS04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS04910 PF13654 AAA domain EMK97_RS04910 PF05362 Lon protease (S16) C-terminal proteolytic domain EMK97_RS04915 PF07295 Zinc-ribbon containing domain EMK97_RS04920 PF08264 Anticodon-binding domain of tRNA EMK97_RS04920 PF13603 Leucyl-tRNA synthetase, Domain 2 EMK97_RS04920 PF00133 tRNA synthetases class I (I, L, M and V) EMK97_RS04925 PF04390 Lipopolysaccharide-assembly EMK97_RS04930 PF14840 Processivity clamp loader gamma complex DNA pol III C-term EMK97_RS04930 PF06144 DNA polymerase III, delta subunit EMK97_RS04935 PF01467 Cytidylyltransferase-like EMK97_RS04945 PF02590 Predicted SPOUT methyltransferase EMK97_RS04950 PF03717 Penicillin-binding Protein dimerisation domain EMK97_RS04950 PF00905 Penicillin binding protein transpeptidase domain EMK97_RS04955 PF01098 Cell cycle protein EMK97_RS04960 PF03330 Lytic transglycolase EMK97_RS04960 PF05036 Sporulation related domain EMK97_RS04965 PF00768 D-alanyl-D-alanine carboxypeptidase EMK97_RS04965 PF07943 Penicillin-binding protein 5, C-terminal domain EMK97_RS04975 PF02817 e3 binding domain EMK97_RS04975 PF00364 Biotin-requiring enzyme EMK97_RS04975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EMK97_RS04980 PF02780 Transketolase, C-terminal domain EMK97_RS04980 PF02779 Transketolase, pyrimidine binding domain EMK97_RS04985 PF00676 Dehydrogenase E1 component EMK97_RS04990 PF00672 HAMP domain EMK97_RS04990 PF02743 Cache domain EMK97_RS04990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS04995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EMK97_RS04995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EMK97_RS04995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EMK97_RS04995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EMK97_RS05000 PF17206 SeqA protein N-terminal domain EMK97_RS05000 PF03925 SeqA protein C-terminal domain EMK97_RS05005 PF00561 alpha/beta hydrolase fold EMK97_RS05015 PF01402 Ribbon-helix-helix protein, copG family EMK97_RS05020 PF00258 Flavodoxin EMK97_RS05025 PF01475 Ferric uptake regulator family EMK97_RS05030 PF00375 Sodium:dicarboxylate symporter family EMK97_RS05035 PF01171 PP-loop family EMK97_RS05035 PF11734 TilS substrate C-terminal domain EMK97_RS05035 PF09179 TilS substrate binding domain EMK97_RS05040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EMK97_RS05045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EMK97_RS05045 PF07733 Bacterial DNA polymerase III alpha NTPase domain EMK97_RS05045 PF14579 Helix-hairpin-helix motif EMK97_RS05045 PF02811 PHP domain EMK97_RS05045 PF01336 OB-fold nucleic acid binding domain EMK97_RS05050 PF01351 Ribonuclease HII EMK97_RS05055 PF02684 Lipid-A-disaccharide synthetase EMK97_RS05060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 EMK97_RS05060 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS05065 PF07977 FabA-like domain EMK97_RS05070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD EMK97_RS05070 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS05075 PF03938 Outer membrane protein (OmpH-like) EMK97_RS05080 PF07244 Surface antigen variable number repeat EMK97_RS05080 PF01103 Surface antigen EMK97_RS05085 PF17820 PDZ domain EMK97_RS05085 PF02163 Peptidase family M50 EMK97_RS05090 PF13288 DXP reductoisomerase C-terminal domain EMK97_RS05090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase EMK97_RS05090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain EMK97_RS05100 PF01255 Putative undecaprenyl diphosphate synthase EMK97_RS05105 PF01765 Ribosome recycling factor EMK97_RS05110 PF00696 Amino acid kinase family EMK97_RS05115 PF00889 Elongation factor TS EMK97_RS05120 PF00318 Ribosomal protein S2 EMK97_RS05130 PF00557 Metallopeptidase family M24 EMK97_RS05135 PF01909 Nucleotidyltransferase domain EMK97_RS05135 PF01966 HD domain EMK97_RS05135 PF08335 GlnD PII-uridylyltransferase EMK97_RS05135 PF01842 ACT domain EMK97_RS05140 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EMK97_RS05140 PF14602 Hexapeptide repeat of succinyl-transferase EMK97_RS05140 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS05150 PF00849 RNA pseudouridylate synthase EMK97_RS05155 PF04287 tRNA pseudouridine synthase C EMK97_RS05175 PF08859 DGC domain EMK97_RS05180 PF07685 CobB/CobQ-like glutamine amidotransferase domain EMK97_RS05180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EMK97_RS05190 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase EMK97_RS05195 PF02654 Cobalamin-5-phosphate synthase EMK97_RS05200 PF02277 Phosphoribosyltransferase EMK97_RS05205 PF00953 Glycosyl transferase family 4 EMK97_RS05210 PF01370 NAD dependent epimerase/dehydratase family EMK97_RS05215 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EMK97_RS05215 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EMK97_RS05215 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EMK97_RS05225 PF00854 POT family EMK97_RS05230 PF01812 5-formyltetrahydrofolate cyclo-ligase family EMK97_RS05235 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EMK97_RS05240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EMK97_RS05240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EMK97_RS05250 PF00171 Aldehyde dehydrogenase family EMK97_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS05255 PF03466 LysR substrate binding domain EMK97_RS05260 PF01548 Transposase EMK97_RS05260 PF02371 Transposase IS116/IS110/IS902 family EMK97_RS05265 PF03942 DTW domain EMK97_RS05275 PF03969 AFG1-like ATPase EMK97_RS05280 PF03880 DbpA RNA binding domain EMK97_RS05280 PF00270 DEAD/DEAH box helicase EMK97_RS05280 PF00271 Helicase conserved C-terminal domain EMK97_RS05295 PF00873 AcrB/AcrD/AcrF family EMK97_RS05300 PF00529 HlyD membrane-fusion protein of T1SS EMK97_RS05300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS05305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EMK97_RS05310 PF04608 Phosphatidylglycerophosphatase A EMK97_RS05315 PF02769 AIR synthase related protein, C-terminal domain EMK97_RS05315 PF00586 AIR synthase related protein, N-terminal domain EMK97_RS05320 PF01029 NusB family EMK97_RS05325 PF00885 6,7-dimethyl-8-ribityllumazine synthase EMK97_RS05330 PF04333 MlaA lipoprotein EMK97_RS05340 PF01584 CheW-like domain EMK97_RS05350 PF13614 AAA domain EMK97_RS05355 PF13677 Membrane MotB of proton-channel complex MotA/MotB EMK97_RS05355 PF00691 OmpA family EMK97_RS05360 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS05365 PF01339 CheB methylesterase EMK97_RS05365 PF00072 Response regulator receiver domain EMK97_RS05370 PF01627 Hpt domain EMK97_RS05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS05370 PF00072 Response regulator receiver domain EMK97_RS05370 PF01584 CheW-like domain EMK97_RS05370 PF02895 Signal transducing histidine kinase, homodimeric domain EMK97_RS05375 PF04344 Chemotaxis phosphatase, CheZ EMK97_RS05380 PF00072 Response regulator receiver domain EMK97_RS05385 PF04542 Sigma-70 region 2 EMK97_RS05385 PF04539 Sigma-70 region 3 EMK97_RS05385 PF04545 Sigma-70, region 4 EMK97_RS05390 PF10609 NUBPL iron-transfer P-loop NTPase EMK97_RS05395 PF00448 SRP54-type protein, GTPase domain EMK97_RS05400 PF00771 FHIPEP family EMK97_RS05405 PF01312 FlhB HrpN YscU SpaS Family EMK97_RS05410 PF01311 Bacterial export proteins, family 1 EMK97_RS05415 PF01313 Bacterial export proteins, family 3 EMK97_RS05420 PF00813 FliP family EMK97_RS05425 PF04347 Flagellar biosynthesis protein, FliO EMK97_RS05430 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EMK97_RS05435 PF02154 Flagellar motor switch protein FliM EMK97_RS05435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term EMK97_RS05455 PF18269 T3SS EscN ATPase C-terminal domain EMK97_RS05455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EMK97_RS05465 PF14841 FliG middle domain EMK97_RS05465 PF14842 FliG N-terminal domain EMK97_RS05465 PF01706 FliG C-terminal domain EMK97_RS05470 PF01514 Secretory protein of YscJ/FliF family EMK97_RS05470 PF08345 Flagellar M-ring protein C-terminal EMK97_RS05475 PF02049 Flagellar hook-basal body complex protein FliE EMK97_RS05480 PF00158 Sigma-54 interaction domain EMK97_RS05480 PF00072 Response regulator receiver domain EMK97_RS05480 PF02954 Bacterial regulatory protein, Fis family EMK97_RS05485 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS05485 PF13188 PAS domain EMK97_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS05490 PF00158 Sigma-54 interaction domain EMK97_RS05490 PF02954 Bacterial regulatory protein, Fis family EMK97_RS05490 PF06490 Flagellar regulatory protein FleQ EMK97_RS05500 PF02719 Polysaccharide biosynthesis protein EMK97_RS05505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EMK97_RS05515 PF02348 Cytidylyltransferase EMK97_RS05520 PF00202 Aminotransferase class-III EMK97_RS05540 PF03102 NeuB family EMK97_RS05540 PF08666 SAF domain EMK97_RS05555 PF00117 Glutamine amidotransferase class-I EMK97_RS05560 PF00977 Histidine biosynthesis protein EMK97_RS05575 PF13302 Acetyltransferase (GNAT) domain EMK97_RS05600 PF07195 Flagellar hook-associated protein 2 C-terminus EMK97_RS05600 PF02465 Flagellar hook-associated protein 2 N-terminus EMK97_RS05600 PF07196 Flagellin hook IN motif EMK97_RS05605 PF00669 Bacterial flagellin N-terminal helical region EMK97_RS05605 PF07196 Flagellin hook IN motif EMK97_RS05605 PF00700 Bacterial flagellin C-terminal helical region EMK97_RS05615 PF00700 Bacterial flagellin C-terminal helical region EMK97_RS05615 PF07196 Flagellin hook IN motif EMK97_RS05615 PF00669 Bacterial flagellin N-terminal helical region EMK97_RS05620 PF00700 Bacterial flagellin C-terminal helical region EMK97_RS05620 PF07196 Flagellin hook IN motif EMK97_RS05620 PF00669 Bacterial flagellin N-terminal helical region EMK97_RS05625 PF00700 Bacterial flagellin C-terminal helical region EMK97_RS05625 PF07196 Flagellin hook IN motif EMK97_RS05625 PF00669 Bacterial flagellin N-terminal helical region EMK97_RS05635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EMK97_RS05635 PF00460 Flagella basal body rod protein EMK97_RS05640 PF10135 Rod binding protein EMK97_RS05640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EMK97_RS05645 PF02119 Flagellar P-ring protein EMK97_RS05650 PF02107 Flagellar L-ring protein EMK97_RS05655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EMK97_RS05655 PF00460 Flagella basal body rod protein EMK97_RS05660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EMK97_RS05660 PF00460 Flagella basal body rod protein EMK97_RS05665 PF07559 Flagellar basal body protein FlaE EMK97_RS05665 PF00460 Flagella basal body rod protein EMK97_RS05665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EMK97_RS05670 PF13861 FlgD Tudor-like domain EMK97_RS05670 PF03963 Flagellar hook capping protein - N-terminal region EMK97_RS05670 PF13860 FlgD Ig-like domain EMK97_RS05675 PF00460 Flagella basal body rod protein EMK97_RS05675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal EMK97_RS05680 PF00460 Flagella basal body rod protein EMK97_RS05685 PF03705 CheR methyltransferase, all-alpha domain EMK97_RS05685 PF01739 CheR methyltransferase, SAM binding domain EMK97_RS05690 PF01584 CheW-like domain EMK97_RS05690 PF00072 Response regulator receiver domain EMK97_RS05735 PF02780 Transketolase, C-terminal domain EMK97_RS05735 PF00456 Transketolase, thiamine diphosphate binding domain EMK97_RS05735 PF02779 Transketolase, pyrimidine binding domain EMK97_RS05740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EMK97_RS05740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EMK97_RS05745 PF00162 Phosphoglycerate kinase EMK97_RS05750 PF01116 Fructose-bisphosphate aldolase class-II EMK97_RS05760 PF12848 ABC transporter EMK97_RS05760 PF00005 ABC transporter EMK97_RS05765 PF07238 PilZ domain EMK97_RS05775 PF12849 PBP superfamily domain EMK97_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS05780 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS05780 PF00989 PAS fold EMK97_RS05780 PF11808 Phosphate regulon sensor protein PhoR EMK97_RS05785 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS05785 PF00072 Response regulator receiver domain EMK97_RS05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS05800 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS05805 PF04381 Putative exonuclease, RdgC EMK97_RS05815 PF01136 Peptidase family U32 EMK97_RS05815 PF16325 Peptidase family U32 C-terminal domain EMK97_RS05820 PF12838 4Fe-4S dicluster domain EMK97_RS05825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS05825 PF03466 LysR substrate binding domain EMK97_RS05835 PF01609 Transposase DDE domain EMK97_RS05835 PF13006 Insertion element 4 transposase N-terminal EMK97_RS05845 PF01751 Toprim domain EMK97_RS05845 PF01396 Topoisomerase DNA binding C4 zinc finger EMK97_RS05845 PF08272 Topoisomerase I zinc-ribbon-like EMK97_RS05845 PF01131 DNA topoisomerase EMK97_RS05850 PF00491 Arginase family EMK97_RS05860 PF00375 Sodium:dicarboxylate symporter family EMK97_RS05865 PF08496 Peptidase family S49 N-terminal EMK97_RS05865 PF01343 Peptidase family S49 EMK97_RS05870 PF12262 Bacterial virulence factor lipase N-terminal EMK97_RS05875 PF00106 short chain dehydrogenase EMK97_RS05880 PF00342 Phosphoglucose isomerase EMK97_RS05890 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS05895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family EMK97_RS05930 PF00483 Nucleotidyl transferase EMK97_RS05935 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase EMK97_RS05940 PF16363 GDP-mannose 4,6 dehydratase EMK97_RS05945 PF04321 RmlD substrate binding domain EMK97_RS05970 PF03958 Bacterial type II/III secretion system short domain EMK97_RS05970 PF00263 Bacterial type II and III secretion system protein EMK97_RS06005 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS06005 PF00114 Pilin (bacterial filament) EMK97_RS06010 PF00482 Type II secretion system (T2SS), protein F EMK97_RS06015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EMK97_RS06015 PF00437 Type II/IV secretion system protein EMK97_RS06020 PF08334 Type II secretion system (T2SS), protein G EMK97_RS06020 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS06025 PF13462 Thioredoxin EMK97_RS06035 PF00501 AMP-binding enzyme EMK97_RS06035 PF13193 AMP-binding enzyme C-terminal domain EMK97_RS06040 PF00561 alpha/beta hydrolase fold EMK97_RS06055 PF00814 Glycoprotease family EMK97_RS06060 PF13307 Helicase C-terminal domain EMK97_RS06060 PF06733 DEAD_2 EMK97_RS06075 PF08029 HisG, C-terminal domain EMK97_RS06075 PF01634 ATP phosphoribosyltransferase EMK97_RS06080 PF00815 Histidinol dehydrogenase EMK97_RS06085 PF00155 Aminotransferase class I and II EMK97_RS06090 PF08645 Polynucleotide kinase 3 phosphatase EMK97_RS06090 PF00475 Imidazoleglycerol-phosphate dehydratase EMK97_RS06095 PF00117 Glutamine amidotransferase class-I EMK97_RS06100 PF00977 Histidine biosynthesis protein EMK97_RS06105 PF00977 Histidine biosynthesis protein EMK97_RS06110 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EMK97_RS06110 PF01502 Phosphoribosyl-AMP cyclohydrolase EMK97_RS06125 PF13673 Acetyltransferase (GNAT) domain EMK97_RS06135 PF05191 Adenylate kinase, active site lid EMK97_RS06140 PF00183 Hsp90 protein EMK97_RS06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS06170 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS06170 PF07724 AAA domain (Cdc48 subfamily) EMK97_RS06170 PF10431 C-terminal, D2-small domain, of ClpB protein EMK97_RS06170 PF02861 Clp amino terminal domain, pathogenicity island component EMK97_RS06170 PF17871 AAA lid domain EMK97_RS06175 PF02578 Multi-copper polyphenol oxidoreductase laccase EMK97_RS06180 PF00849 RNA pseudouridylate synthase EMK97_RS06180 PF01479 S4 domain EMK97_RS06185 PF13525 Outer membrane lipoprotein EMK97_RS06195 PF00543 Nitrogen regulatory protein P-II EMK97_RS06200 PF02540 NAD synthase EMK97_RS06210 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS06210 PF00114 Pilin (bacterial filament) EMK97_RS06245 PF02401 LytB protein EMK97_RS06250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS06255 PF01252 Signal peptidase (SPase) II EMK97_RS06260 PF06827 Zinc finger found in FPG and IleRS EMK97_RS06260 PF00133 tRNA synthetases class I (I, L, M and V) EMK97_RS06260 PF08264 Anticodon-binding domain of tRNA EMK97_RS06265 PF06574 FAD synthetase EMK97_RS06265 PF01687 Riboflavin kinase EMK97_RS06270 PF03023 Lipid II flippase MurJ EMK97_RS06275 PF01649 Ribosomal protein S20 EMK97_RS06285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS06285 PF08447 PAS fold EMK97_RS06290 PF05199 GMC oxidoreductase EMK97_RS06290 PF00732 GMC oxidoreductase EMK97_RS06295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS06295 PF12806 Acetyl-CoA dehydrogenase C-terminal like EMK97_RS06295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS06295 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS06305 PF02225 PA domain EMK97_RS06305 PF00082 Subtilase family EMK97_RS06305 PF13860 FlgD Ig-like domain EMK97_RS06305 PF05922 Peptidase inhibitor I9 EMK97_RS06325 PF13378 Enolase C-terminal domain-like EMK97_RS06325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain EMK97_RS06330 PF00596 Class II Aldolase and Adducin N-terminal domain EMK97_RS06340 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS06340 PF02909 Tetracyclin repressor-like, C-terminal domain EMK97_RS06350 PF00210 Ferritin-like domain EMK97_RS06355 PF00210 Ferritin-like domain EMK97_RS06360 PF00005 ABC transporter EMK97_RS06365 PF01032 FecCD transport family EMK97_RS06370 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP EMK97_RS06375 PF01497 Periplasmic binding protein EMK97_RS06380 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS06380 PF00593 TonB dependent receptor EMK97_RS06385 PF00672 HAMP domain EMK97_RS06385 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS06385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS06390 PF00072 Response regulator receiver domain EMK97_RS06390 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS06400 PF01584 CheW-like domain EMK97_RS06400 PF02895 Signal transducing histidine kinase, homodimeric domain EMK97_RS06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS06400 PF01627 Hpt domain EMK97_RS06400 PF07194 P2 response regulator binding domain EMK97_RS06405 PF01584 CheW-like domain EMK97_RS06410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS06415 PF01739 CheR methyltransferase, SAM binding domain EMK97_RS06415 PF03705 CheR methyltransferase, all-alpha domain EMK97_RS06420 PF03975 CheD chemotactic sensory transduction EMK97_RS06425 PF01339 CheB methylesterase EMK97_RS06425 PF00072 Response regulator receiver domain EMK97_RS06430 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS06430 PF00563 EAL domain EMK97_RS06430 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS06435 PF00072 Response regulator receiver domain EMK97_RS06440 PF00756 Putative esterase EMK97_RS06445 PF00107 Zinc-binding dehydrogenase EMK97_RS06445 PF08240 Alcohol dehydrogenase GroES-like domain EMK97_RS06450 PF03466 LysR substrate binding domain EMK97_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS06460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS06460 PF00672 HAMP domain EMK97_RS06460 PF02743 Cache domain EMK97_RS06465 PF00293 NUDIX domain EMK97_RS06470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS06470 PF08447 PAS fold EMK97_RS06485 PF00246 Zinc carboxypeptidase EMK97_RS06495 PF08443 RimK-like ATP-grasp domain EMK97_RS06495 PF18030 RimK PreATP-grasp domain EMK97_RS06500 PF07687 Peptidase dimerisation domain EMK97_RS06500 PF01546 Peptidase family M20/M25/M40 EMK97_RS06510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EMK97_RS06510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EMK97_RS06515 PF01266 FAD dependent oxidoreductase EMK97_RS06515 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EMK97_RS06525 PF12833 Helix-turn-helix domain EMK97_RS06540 PF02798 Glutathione S-transferase, N-terminal domain EMK97_RS06540 PF14497 Glutathione S-transferase, C-terminal domain EMK97_RS06550 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS06550 PF00672 HAMP domain EMK97_RS06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS06555 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS06555 PF00072 Response regulator receiver domain EMK97_RS06570 PF00005 ABC transporter EMK97_RS06590 PF00857 Isochorismatase family EMK97_RS06595 PF03466 LysR substrate binding domain EMK97_RS06595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS06600 PF17284 Spermidine synthase tetramerisation domain EMK97_RS06610 PF00491 Arginase family EMK97_RS06615 PF17944 Arginine decarboxylase C-terminal helical extension EMK97_RS06615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EMK97_RS06615 PF17810 Arginine decarboxylase helical bundle domain EMK97_RS06640 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EMK97_RS06640 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EMK97_RS06650 PF03466 LysR substrate binding domain EMK97_RS06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS06665 PF00111 2Fe-2S iron-sulfur cluster binding domain EMK97_RS06670 PF00012 Hsp70 protein EMK97_RS06675 PF00226 DnaJ domain EMK97_RS06675 PF07743 HSCB C-terminal oligomerisation domain EMK97_RS06680 PF01521 Iron-sulphur cluster biosynthesis EMK97_RS06685 PF01592 NifU-like N terminal domain EMK97_RS06690 PF00266 Aminotransferase class-V EMK97_RS06695 PF02082 Transcriptional regulator EMK97_RS06700 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS06700 PF06426 Serine acetyltransferase, N-terminal EMK97_RS06705 PF00588 SpoU rRNA Methylase family EMK97_RS06710 PF00459 Inositol monophosphatase family EMK97_RS06715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EMK97_RS06715 PF14824 Sirohaem biosynthesis protein central EMK97_RS06715 PF10414 Sirohaem synthase dimerisation region EMK97_RS06720 PF00271 Helicase conserved C-terminal domain EMK97_RS06720 PF00270 DEAD/DEAH box helicase EMK97_RS06725 PF02355 Protein export membrane protein EMK97_RS06725 PF07549 SecD/SecF GG Motif EMK97_RS06730 PF07549 SecD/SecF GG Motif EMK97_RS06730 PF13721 SecD export protein N-terminal TM region EMK97_RS06730 PF02355 Protein export membrane protein EMK97_RS06735 PF02699 Preprotein translocase subunit EMK97_RS06740 PF01702 Queuine tRNA-ribosyltransferase EMK97_RS06745 PF02547 Queuosine biosynthesis protein EMK97_RS06765 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) EMK97_RS06790 PF00009 Elongation factor Tu GTP binding domain EMK97_RS06790 PF03144 Elongation factor Tu domain 2 EMK97_RS06790 PF16658 Class II release factor RF3, C-terminal domain EMK97_RS06795 PF03485 Arginyl tRNA synthetase N terminal domain EMK97_RS06795 PF00750 tRNA synthetases class I (R) EMK97_RS06795 PF05746 DALR anticodon binding domain EMK97_RS06800 PF01026 TatD related DNase EMK97_RS06810 PF18429 Domain of unknown function (DUF5609) EMK97_RS06820 PF18073 Rubredoxin metal binding domain EMK97_RS06825 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EMK97_RS06825 PF00326 Prolyl oligopeptidase family EMK97_RS06845 PF12857 TOBE-like domain EMK97_RS06845 PF00005 ABC transporter EMK97_RS06845 PF17850 CysA C-terminal regulatory domain EMK97_RS06860 PF13545 Crp-like helix-turn-helix domain EMK97_RS06860 PF00027 Cyclic nucleotide-binding domain EMK97_RS06865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EMK97_RS06865 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EMK97_RS06870 PF02965 Vitamin B12 dependent methionine synthase, activation domain EMK97_RS06870 PF02607 B12 binding domain EMK97_RS06870 PF02574 Homocysteine S-methyltransferase EMK97_RS06870 PF02310 B12 binding domain EMK97_RS06870 PF00809 Pterin binding enzyme EMK97_RS06875 PF04204 Homoserine O-succinyltransferase EMK97_RS06880 PF00154 recA bacterial DNA recombination protein EMK97_RS06885 PF08448 PAS fold EMK97_RS06885 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS06885 PF00563 EAL domain EMK97_RS06890 PF00488 MutS domain V EMK97_RS06890 PF05190 MutS family domain IV EMK97_RS06890 PF05192 MutS domain III EMK97_RS06890 PF05188 MutS domain II EMK97_RS06890 PF01624 MutS domain I EMK97_RS06895 PF00140 Sigma-70 factor, region 1.2 EMK97_RS06895 PF04542 Sigma-70 region 2 EMK97_RS06895 PF04539 Sigma-70 region 3 EMK97_RS06895 PF04545 Sigma-70, region 4 EMK97_RS06900 PF01476 LysM domain EMK97_RS06900 PF01551 Peptidase family M23 EMK97_RS06905 PF09335 SNARE associated Golgi protein EMK97_RS06915 PF01975 Survival protein SurE EMK97_RS06920 PF01142 tRNA pseudouridine synthase D (TruD) EMK97_RS06925 PF02542 YgbB family EMK97_RS06930 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EMK97_RS06935 PF04977 Septum formation initiator EMK97_RS06945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EMK97_RS06945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EMK97_RS06955 PF00005 ABC transporter EMK97_RS06965 PF17176 tRNA-binding domain EMK97_RS06965 PF05127 Helicase EMK97_RS06965 PF08351 Domain of unknown function (DUF1726) EMK97_RS06965 PF13718 GNAT acetyltransferase 2 EMK97_RS06975 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region EMK97_RS06975 PF01243 Pyridoxamine 5'-phosphate oxidase EMK97_RS06980 PF01435 Peptidase family M48 EMK97_RS06985 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit EMK97_RS06990 PF00682 HMGL-like EMK97_RS06990 PF00364 Biotin-requiring enzyme EMK97_RS06990 PF02436 Conserved carboxylase domain EMK97_RS07015 PF02599 Global regulator protein family EMK97_RS07020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EMK97_RS07020 PF01411 tRNA synthetases class II (A) EMK97_RS07020 PF02272 DHHA1 domain EMK97_RS07025 PF02631 RecX family EMK97_RS07030 PF11798 IMS family HHH motif EMK97_RS07030 PF11799 impB/mucB/samB family C-terminal domain EMK97_RS07030 PF00817 impB/mucB/samB family EMK97_RS07055 PF00563 EAL domain EMK97_RS07055 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS07055 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS07060 PF00571 CBS domain EMK97_RS07060 PF01769 Divalent cation transporter EMK97_RS07060 PF03448 MgtE intracellular N domain EMK97_RS07065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS07065 PF03466 LysR substrate binding domain EMK97_RS07070 PF11799 impB/mucB/samB family C-terminal domain EMK97_RS07070 PF00817 impB/mucB/samB family EMK97_RS07070 PF11798 IMS family HHH motif EMK97_RS07075 PF00762 Ferrochelatase EMK97_RS07085 PF03918 Cytochrome C biogenesis protein EMK97_RS07090 PF08534 Redoxin EMK97_RS07095 PF01578 Cytochrome C assembly protein EMK97_RS07095 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal EMK97_RS07100 PF00005 ABC transporter EMK97_RS07105 PF03379 CcmB protein EMK97_RS07110 PF01578 Cytochrome C assembly protein EMK97_RS07115 PF04995 Heme exporter protein D (CcmD) EMK97_RS07120 PF03100 CcmE EMK97_RS07135 PF01979 Amidohydrolase family EMK97_RS07140 PF01869 BadF/BadG/BcrA/BcrD ATPase family EMK97_RS07145 PF03173 Putative carbohydrate binding domain EMK97_RS07145 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain EMK97_RS07145 PF02838 Glycosyl hydrolase family 20, domain 2 EMK97_RS07145 PF00728 Glycosyl hydrolase family 20, catalytic domain EMK97_RS07160 PF04820 Tryptophan halogenase EMK97_RS07170 PF00342 Phosphoglucose isomerase EMK97_RS07175 PF00356 Bacterial regulatory proteins, lacI family EMK97_RS07180 PF06877 Regulator of ribonuclease activity B EMK97_RS07185 PF01553 Acyltransferase EMK97_RS07195 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS07195 PF00072 Response regulator receiver domain EMK97_RS07200 PF13417 Glutathione S-transferase, N-terminal domain EMK97_RS07200 PF00043 Glutathione S-transferase, C-terminal domain EMK97_RS07205 PF00005 ABC transporter EMK97_RS07235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EMK97_RS07240 PF08338 Domain of unknown function (DUF1731) EMK97_RS07240 PF01370 NAD dependent epimerase/dehydratase family EMK97_RS07245 PF00563 EAL domain EMK97_RS07245 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS07245 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS07260 PF01752 Collagenase EMK97_RS07260 PF08453 Peptidase family M9 N-terminal EMK97_RS07270 PF03649 Uncharacterised protein family (UPF0014) EMK97_RS07275 PF00005 ABC transporter EMK97_RS07275 PF03459 TOBE domain EMK97_RS07280 PF00528 Binding-protein-dependent transport system inner membrane component EMK97_RS07290 PF00892 EamA-like transporter family EMK97_RS07315 PF00860 Permease family EMK97_RS07330 PF07687 Peptidase dimerisation domain EMK97_RS07330 PF01546 Peptidase family M20/M25/M40 EMK97_RS07345 PF02661 Fic/DOC family EMK97_RS07355 PF13180 PDZ domain EMK97_RS07360 PF00140 Sigma-70 factor, region 1.2 EMK97_RS07360 PF04542 Sigma-70 region 2 EMK97_RS07360 PF04545 Sigma-70, region 4 EMK97_RS07380 PF00005 ABC transporter EMK97_RS07385 PF00011 Hsp20/alpha crystallin family EMK97_RS07405 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS07415 PF00873 AcrB/AcrD/AcrF family EMK97_RS07440 PF03739 Lipopolysaccharide export system permease LptF/LptG EMK97_RS07445 PF03739 Lipopolysaccharide export system permease LptF/LptG EMK97_RS07450 PF00883 Cytosol aminopeptidase family, catalytic domain EMK97_RS07450 PF02789 Cytosol aminopeptidase family, N-terminal domain EMK97_RS07455 PF04364 DNA polymerase III chi subunit, HolC EMK97_RS07460 PF08264 Anticodon-binding domain of tRNA EMK97_RS07460 PF00133 tRNA synthetases class I (I, L, M and V) EMK97_RS07460 PF10458 Valyl tRNA synthetase tRNA binding arm EMK97_RS07465 PF00313 'Cold-shock' DNA-binding domain EMK97_RS07480 PF00925 GTP cyclohydrolase II EMK97_RS07480 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EMK97_RS07485 PF00677 Lumazine binding domain EMK97_RS07490 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EMK97_RS07490 PF01872 RibD C-terminal domain EMK97_RS07495 PF03477 ATP cone domain EMK97_RS07505 PF00464 Serine hydroxymethyltransferase EMK97_RS07515 PF04542 Sigma-70 region 2 EMK97_RS07515 PF08281 Sigma-70, region 4 EMK97_RS07525 PF00005 ABC transporter EMK97_RS07530 PF00561 alpha/beta hydrolase fold EMK97_RS07540 PF03006 Haemolysin-III related EMK97_RS07550 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS07550 PF00593 TonB dependent receptor EMK97_RS07565 PF06945 Protein of unknown function (DUF1289) EMK97_RS07570 PF00916 Sulfate permease family EMK97_RS07570 PF01740 STAS domain EMK97_RS07575 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS07580 PF00171 Aldehyde dehydrogenase family EMK97_RS07585 PF05544 Proline racemase EMK97_RS07590 PF01266 FAD dependent oxidoreductase EMK97_RS07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS07595 PF00497 Bacterial extracellular solute-binding proteins, family 3 EMK97_RS07595 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS07600 PF13180 PDZ domain EMK97_RS07600 PF17820 PDZ domain EMK97_RS07610 PF02390 Putative methyltransferase EMK97_RS07615 PF04320 Protein with unknown function (DUF469) EMK97_RS07620 PF00730 HhH-GPD superfamily base excision DNA repair protein EMK97_RS07620 PF00633 Helix-hairpin-helix motif EMK97_RS07620 PF10576 Iron-sulfur binding domain of endonuclease III EMK97_RS07620 PF14815 NUDIX domain EMK97_RS07625 PF04362 Bacterial Fe(2+) trafficking EMK97_RS07650 PF03575 Peptidase family S51 EMK97_RS07655 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS07655 PF00593 TonB dependent receptor EMK97_RS07660 PF03606 C4-dicarboxylate anaerobic carrier EMK97_RS07665 PF01979 Amidohydrolase family EMK97_RS07675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS07675 PF03466 LysR substrate binding domain EMK97_RS07695 PF00593 TonB dependent receptor EMK97_RS07695 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS07730 PF13091 PLD-like domain EMK97_RS07740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS07740 PF00529 HlyD membrane-fusion protein of T1SS EMK97_RS07745 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS07745 PF17158 Membrane-associated sensor, integral membrane domain EMK97_RS07750 PF00375 Sodium:dicarboxylate symporter family EMK97_RS07770 PF01594 AI-2E family transporter EMK97_RS07790 PF01709 Transcriptional regulator EMK97_RS07800 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS07800 PF00593 TonB dependent receptor EMK97_RS07805 PF00072 Response regulator receiver domain EMK97_RS07805 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS07810 PF13340 Putative transposase of IS4/5 family (DUF4096) EMK97_RS07830 PF01609 Transposase DDE domain EMK97_RS07830 PF13006 Insertion element 4 transposase N-terminal EMK97_RS07835 PF03989 DNA gyrase C-terminal domain, beta-propeller EMK97_RS07835 PF00521 DNA gyrase/topoisomerase IV, subunit A EMK97_RS07840 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS07840 PF17158 Membrane-associated sensor, integral membrane domain EMK97_RS07845 PF08448 PAS fold EMK97_RS07845 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS07850 PF00204 DNA gyrase B EMK97_RS07850 PF00986 DNA gyrase B subunit, carboxyl terminus EMK97_RS07850 PF01751 Toprim domain EMK97_RS07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS07855 PF05728 Uncharacterised protein family (UPF0227) EMK97_RS07860 PF00149 Calcineurin-like phosphoesterase EMK97_RS07865 PF06853 Protein of unknown function (DUF1249) EMK97_RS07870 PF00293 NUDIX domain EMK97_RS07875 PF02321 Outer membrane efflux protein EMK97_RS07880 PF00534 Glycosyl transferases group 1 EMK97_RS07885 PF03279 Bacterial lipid A biosynthesis acyltransferase EMK97_RS07895 PF08335 GlnD PII-uridylyltransferase EMK97_RS07895 PF03710 Glutamate-ammonia ligase adenylyltransferase EMK97_RS07940 PF03734 L,D-transpeptidase catalytic domain EMK97_RS07940 PF01476 LysM domain EMK97_RS07940 PF17969 L,D-transpeptidase C-terminal domain EMK97_RS07945 PF01928 CYTH domain EMK97_RS07950 PF08239 Bacterial SH3 domain EMK97_RS07955 PF00534 Glycosyl transferases group 1 EMK97_RS07955 PF13579 Glycosyl transferase 4-like domain EMK97_RS07970 PF00682 HMGL-like EMK97_RS07970 PF08502 LeuA allosteric (dimerisation) domain EMK97_RS07975 PF00180 Isocitrate/isopropylmalate dehydrogenase EMK97_RS07980 PF00330 Aconitase family (aconitate hydratase) EMK97_RS07985 PF00694 Aconitase C-terminal domain EMK97_RS07995 PF13401 AAA domain EMK97_RS07995 PF01471 Putative peptidoglycan binding domain EMK97_RS08005 PF01966 HD domain EMK97_RS08005 PF01743 Poly A polymerase head domain EMK97_RS08005 PF12627 Probable RNA and SrmB- binding site of polymerase A EMK97_RS08020 PF00563 EAL domain EMK97_RS08020 PF01590 GAF domain EMK97_RS08020 PF00360 Phytochrome region EMK97_RS08020 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS08030 PF03264 NapC/NirT cytochrome c family, N-terminal region EMK97_RS08035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EMK97_RS08040 PF01814 Hemerythrin HHE cation binding domain EMK97_RS08045 PF01814 Hemerythrin HHE cation binding domain EMK97_RS08050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III EMK97_RS08060 PF17805 AsnC-like ligand binding domain EMK97_RS08065 PF13404 AsnC-type helix-turn-helix domain EMK97_RS08065 PF17805 AsnC-like ligand binding domain EMK97_RS08070 PF17805 AsnC-like ligand binding domain EMK97_RS08075 PF13186 Iron-sulfur cluster-binding domain EMK97_RS08075 PF04055 Radical SAM superfamily EMK97_RS08080 PF10414 Sirohaem synthase dimerisation region EMK97_RS08080 PF14824 Sirohaem biosynthesis protein central EMK97_RS08080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EMK97_RS08095 PF00175 Oxidoreductase NAD-binding domain EMK97_RS08095 PF00970 Oxidoreductase FAD-binding domain EMK97_RS08095 PF00111 2Fe-2S iron-sulfur cluster binding domain EMK97_RS08105 PF00873 AcrB/AcrD/AcrF family EMK97_RS08110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS08140 PF02472 Biopolymer transport protein ExbD/TolR EMK97_RS08145 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS08150 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS08160 PF00570 HRDC domain EMK97_RS08160 PF00271 Helicase conserved C-terminal domain EMK97_RS08160 PF09382 RQC domain EMK97_RS08160 PF00270 DEAD/DEAH box helicase EMK97_RS08160 PF16124 RecQ zinc-binding EMK97_RS08165 PF02696 Uncharacterized ACR, YdiU/UPF0061 family EMK97_RS08190 PF00117 Glutamine amidotransferase class-I EMK97_RS08190 PF00958 GMP synthase C terminal domain EMK97_RS08190 PF02540 NAD synthase EMK97_RS08195 PF00571 CBS domain EMK97_RS08195 PF00478 IMP dehydrogenase / GMP reductase domain EMK97_RS08200 PF13742 OB-fold nucleic acid binding domain EMK97_RS08200 PF02601 Exonuclease VII, large subunit EMK97_RS08215 PF01926 50S ribosome-binding GTPase EMK97_RS08215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EMK97_RS08220 PF13360 PQQ-like domain EMK97_RS08225 PF09976 Tetratricopeptide repeat-like domain EMK97_RS08230 PF03129 Anticodon binding domain EMK97_RS08230 PF13393 Histidyl-tRNA synthetase EMK97_RS08235 PF04551 GcpE protein EMK97_RS08240 PF13464 Domain of unknown function (DUF4115) EMK97_RS08250 PF04055 Radical SAM superfamily EMK97_RS08255 PF00334 Nucleoside diphosphate kinase EMK97_RS08265 PF03949 Malic enzyme, NAD binding domain EMK97_RS08265 PF00390 Malic enzyme, N-terminal domain EMK97_RS08270 PF04384 Iron-sulphur cluster assembly EMK97_RS08275 PF00291 Pyridoxal-phosphate dependent enzyme EMK97_RS08280 PF01037 Lrp/AsnC ligand binding domain EMK97_RS08280 PF13404 AsnC-type helix-turn-helix domain EMK97_RS08285 PF00072 Response regulator receiver domain EMK97_RS08285 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS08290 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS08290 PF00672 HAMP domain EMK97_RS08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS08325 PF00012 Hsp70 protein EMK97_RS08335 PF01432 Peptidase family M3 EMK97_RS08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS08345 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS08355 PF00072 Response regulator receiver domain EMK97_RS08355 PF00158 Sigma-54 interaction domain EMK97_RS08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS08365 PF03466 LysR substrate binding domain EMK97_RS08370 PF00085 Thioredoxin EMK97_RS08380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EMK97_RS08380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EMK97_RS08400 PF03167 Uracil DNA glycosylase superfamily EMK97_RS08405 PF00291 Pyridoxal-phosphate dependent enzyme EMK97_RS08405 PF14821 Threonine synthase N terminus EMK97_RS08410 PF00288 GHMP kinases N terminal domain EMK97_RS08410 PF08544 GHMP kinases C terminal EMK97_RS08415 PF00696 Amino acid kinase family EMK97_RS08415 PF01842 ACT domain EMK97_RS08415 PF03447 Homoserine dehydrogenase, NAD binding domain EMK97_RS08415 PF13840 ACT domain EMK97_RS08415 PF00742 Homoserine dehydrogenase EMK97_RS08420 PF05230 MASE2 domain EMK97_RS08420 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS08430 PF01966 HD domain EMK97_RS08430 PF00072 Response regulator receiver domain EMK97_RS08455 PF14814 Bifunctional transglycosylase second domain EMK97_RS08455 PF00905 Penicillin binding protein transpeptidase domain EMK97_RS08455 PF00912 Transglycosylase EMK97_RS08460 PF08482 ATP-dependent helicase C-terminal EMK97_RS08460 PF00271 Helicase conserved C-terminal domain EMK97_RS08460 PF04408 Helicase associated domain (HA2) EMK97_RS08460 PF00270 DEAD/DEAH box helicase EMK97_RS08465 PF03061 Thioesterase superfamily EMK97_RS08480 PF03749 Sugar fermentation stimulation protein RE domain EMK97_RS08480 PF17746 SfsA N-terminal OB domain EMK97_RS08485 PF01258 Prokaryotic dksA/traR C4-type zinc finger EMK97_RS08490 PF00749 tRNA synthetases class I (E and Q), catalytic domain EMK97_RS08495 PF00106 short chain dehydrogenase EMK97_RS08500 PF17154 Gammaproteobacterial periplasmic sensor domain EMK97_RS08500 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS08500 PF00563 EAL domain EMK97_RS08500 PF00672 HAMP domain EMK97_RS08505 PF12626 Polymerase A arginine-rich C-terminus EMK97_RS08505 PF01743 Poly A polymerase head domain EMK97_RS08505 PF12627 Probable RNA and SrmB- binding site of polymerase A EMK97_RS08510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EMK97_RS08515 PF02548 Ketopantoate hydroxymethyltransferase EMK97_RS08520 PF02569 Pantoate-beta-alanine ligase EMK97_RS08525 PF00282 Pyridoxal-dependent decarboxylase conserved domain EMK97_RS08535 PF11999 Protein of unknown function (DUF3494) EMK97_RS08535 PF02368 Bacterial Ig-like domain (group 2) EMK97_RS08540 PF00118 TCP-1/cpn60 chaperonin family EMK97_RS08545 PF00166 Chaperonin 10 Kd subunit EMK97_RS08550 PF04186 FxsA cytoplasmic membrane protein EMK97_RS08555 PF03091 CutA1 divalent ion tolerance protein EMK97_RS08560 PF11412 Disulphide bond corrector protein DsbC EMK97_RS08560 PF02683 Cytochrome C biogenesis protein transmembrane region EMK97_RS08565 PF00563 EAL domain EMK97_RS08565 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS08565 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS08580 PF01220 Dehydroquinase class II EMK97_RS08585 PF00364 Biotin-requiring enzyme EMK97_RS08590 PF02785 Biotin carboxylase C-terminal domain EMK97_RS08590 PF00289 Biotin carboxylase, N-terminal domain EMK97_RS08590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EMK97_RS08610 PF00873 AcrB/AcrD/AcrF family EMK97_RS08615 PF00873 AcrB/AcrD/AcrF family EMK97_RS08620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS08620 PF00529 HlyD membrane-fusion protein of T1SS EMK97_RS08625 PF02798 Glutathione S-transferase, N-terminal domain EMK97_RS08625 PF00043 Glutathione S-transferase, C-terminal domain EMK97_RS08630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS08630 PF03466 LysR substrate binding domain EMK97_RS08635 PF13538 UvrD-like helicase C-terminal domain EMK97_RS08635 PF14490 Helix-hairpin-helix containing domain EMK97_RS08635 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EMK97_RS08645 PF02796 Helix-turn-helix domain of resolvase EMK97_RS08645 PF00239 Resolvase, N terminal domain EMK97_RS08675 PF00436 Single-strand binding protein family EMK97_RS08685 PF13382 Adenine deaminase C-terminal domain EMK97_RS08685 PF01979 Amidohydrolase family EMK97_RS08695 PF13091 PLD-like domain EMK97_RS08700 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS08700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EMK97_RS08715 PF07311 Dodecin EMK97_RS08720 PF07690 Major Facilitator Superfamily EMK97_RS08725 PF00005 ABC transporter EMK97_RS08725 PF17755 UvrA DNA-binding domain EMK97_RS08725 PF17760 UvrA interaction domain EMK97_RS08750 PF00501 AMP-binding enzyme EMK97_RS08750 PF16177 Acetyl-coenzyme A synthetase N-terminus EMK97_RS08750 PF13193 AMP-binding enzyme C-terminal domain EMK97_RS08755 PF00849 RNA pseudouridylate synthase EMK97_RS08755 PF01479 S4 domain EMK97_RS08760 PF03009 Glycerophosphoryl diester phosphodiesterase family EMK97_RS08775 PF01979 Amidohydrolase family EMK97_RS08780 PF07702 UTRA domain EMK97_RS08780 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS08785 PF01207 Dihydrouridine synthase (Dus) EMK97_RS08795 PF01370 NAD dependent epimerase/dehydratase family EMK97_RS08805 PF00583 Acetyltransferase (GNAT) family EMK97_RS08805 PF09500 Putative thioesterase (yiiD_Cterm) EMK97_RS08820 PF00366 Ribosomal protein S17 EMK97_RS08825 PF00831 Ribosomal L29 protein EMK97_RS08830 PF00252 Ribosomal protein L16p/L10e EMK97_RS08835 PF00189 Ribosomal protein S3, C-terminal domain EMK97_RS08835 PF07650 KH domain EMK97_RS08840 PF00237 Ribosomal protein L22p/L17e EMK97_RS08845 PF00203 Ribosomal protein S19 EMK97_RS08850 PF00181 Ribosomal Proteins L2, RNA binding domain EMK97_RS08850 PF03947 Ribosomal Proteins L2, C-terminal domain EMK97_RS08855 PF00276 Ribosomal protein L23 EMK97_RS08860 PF00573 Ribosomal protein L4/L1 family EMK97_RS08865 PF00297 Ribosomal protein L3 EMK97_RS08870 PF00338 Ribosomal protein S10p/S20e EMK97_RS08875 PF00171 Aldehyde dehydrogenase family EMK97_RS08880 PF03764 Elongation factor G, domain IV EMK97_RS08880 PF14492 Elongation Factor G, domain II EMK97_RS08880 PF00679 Elongation factor G C-terminus EMK97_RS08880 PF00009 Elongation factor Tu GTP binding domain EMK97_RS08880 PF03144 Elongation factor Tu domain 2 EMK97_RS08885 PF00107 Zinc-binding dehydrogenase EMK97_RS08885 PF08240 Alcohol dehydrogenase GroES-like domain EMK97_RS08890 PF16925 Tetracyclin repressor-like, C-terminal domain EMK97_RS08890 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS08900 PF01906 Putative heavy-metal-binding EMK97_RS08905 PF01906 Putative heavy-metal-binding EMK97_RS08910 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EMK97_RS08910 PF02843 Phosphoribosylglycinamide synthetase, C domain EMK97_RS08910 PF02844 Phosphoribosylglycinamide synthetase, N domain EMK97_RS08920 PF02142 MGS-like domain EMK97_RS08920 PF01808 AICARFT/IMPCHase bienzyme EMK97_RS08925 PF02954 Bacterial regulatory protein, Fis family EMK97_RS08930 PF01207 Dihydrouridine synthase (Dus) EMK97_RS08980 PF08448 PAS fold EMK97_RS08980 PF13426 PAS domain EMK97_RS08980 PF08447 PAS fold EMK97_RS08980 PF05231 MASE1 EMK97_RS08980 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS08980 PF00563 EAL domain EMK97_RS08990 PF03737 Aldolase/RraA EMK97_RS08995 PF10414 Sirohaem synthase dimerisation region EMK97_RS08995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EMK97_RS09005 PF01609 Transposase DDE domain EMK97_RS09005 PF13006 Insertion element 4 transposase N-terminal EMK97_RS09015 PF00849 RNA pseudouridylate synthase EMK97_RS09055 PF04237 YjbR EMK97_RS09085 PF00905 Penicillin binding protein transpeptidase domain EMK97_RS09090 PF13180 PDZ domain EMK97_RS09100 PF00579 tRNA synthetases class I (W and Y) EMK97_RS09105 PF00834 Ribulose-phosphate 3 epimerase family EMK97_RS09125 PF02086 D12 class N6 adenine-specific DNA methyltransferase EMK97_RS09135 PF01761 3-dehydroquinate synthase EMK97_RS09140 PF01202 Shikimate kinase EMK97_RS09145 PF07660 Secretin and TonB N terminus short domain EMK97_RS09145 PF03958 Bacterial type II/III secretion system short domain EMK97_RS09145 PF00263 Bacterial type II and III secretion system protein EMK97_RS09145 PF11741 AMIN domain EMK97_RS09155 PF04350 Pilus assembly protein, PilO EMK97_RS09165 PF11104 Type IV pilus assembly protein PilM; EMK97_RS09170 PF17092 Penicillin-binding protein OB-like domain EMK97_RS09170 PF00912 Transglycosylase EMK97_RS09170 PF00905 Penicillin binding protein transpeptidase domain EMK97_RS09175 PF00696 Amino acid kinase family EMK97_RS09175 PF00583 Acetyltransferase (GNAT) family EMK97_RS09180 PF00206 Lyase EMK97_RS09180 PF14698 Argininosuccinate lyase C-terminal EMK97_RS09180 PF00583 Acetyltransferase (GNAT) family EMK97_RS09185 PF00764 Arginosuccinate synthase EMK97_RS09190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EMK97_RS09190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EMK97_RS09195 PF00696 Amino acid kinase family EMK97_RS09200 PF02774 Semialdehyde dehydrogenase, dimerisation domain EMK97_RS09200 PF01118 Semialdehyde dehydrogenase, NAD binding domain EMK97_RS09205 PF01546 Peptidase family M20/M25/M40 EMK97_RS09205 PF07687 Peptidase dimerisation domain EMK97_RS09220 PF00742 Homoserine dehydrogenase EMK97_RS09220 PF03447 Homoserine dehydrogenase, NAD binding domain EMK97_RS09220 PF00696 Amino acid kinase family EMK97_RS09225 PF01053 Cys/Met metabolism PLP-dependent enzyme EMK97_RS09230 PF01340 Met Apo-repressor, MetJ EMK97_RS09245 PF01208 Uroporphyrinogen decarboxylase (URO-D) EMK97_RS09255 PF09055 Nickel-containing superoxide dismutase EMK97_RS09275 PF01546 Peptidase family M20/M25/M40 EMK97_RS09275 PF07687 Peptidase dimerisation domain EMK97_RS09285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS09285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase EMK97_RS09295 PF04102 SlyX EMK97_RS09300 PF09526 Probable metal-binding protein (DUF2387) EMK97_RS09305 PF00005 ABC transporter EMK97_RS09305 PF12848 ABC transporter EMK97_RS09325 PF00561 alpha/beta hydrolase fold EMK97_RS09330 PF06794 Uncharacterised protein family (UPF0270) EMK97_RS09345 PF02743 Cache domain EMK97_RS09345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS09345 PF00672 HAMP domain EMK97_RS09355 PF00459 Inositol monophosphatase family EMK97_RS09360 PF00293 NUDIX domain EMK97_RS09365 PF13419 Haloacid dehalogenase-like hydrolase EMK97_RS09375 PF04612 Type II secretion system (T2SS), protein M EMK97_RS09380 PF05134 Type II secretion system (T2SS), protein L EMK97_RS09380 PF12693 GspL periplasmic domain EMK97_RS09385 PF03934 Type II secretion system (T2SS), protein K EMK97_RS09390 PF11612 Type II secretion system (T2SS), protein J EMK97_RS09390 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS09395 PF02501 Type II secretion system (T2SS), protein I EMK97_RS09395 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS09400 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS09400 PF12019 Type II transport protein GspH EMK97_RS09405 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS09405 PF08334 Type II secretion system (T2SS), protein G EMK97_RS09410 PF00482 Type II secretion system (T2SS), protein F EMK97_RS09415 PF00437 Type II/IV secretion system protein EMK97_RS09420 PF00263 Bacterial type II and III secretion system protein EMK97_RS09420 PF03958 Bacterial type II/III secretion system short domain EMK97_RS09425 PF11356 Type II secretion system protein C EMK97_RS09430 PF01479 S4 domain EMK97_RS09435 PF01430 Hsp33 protein EMK97_RS09440 PF01293 Phosphoenolpyruvate carboxykinase EMK97_RS09445 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS09445 PF00672 HAMP domain EMK97_RS09450 PF00072 Response regulator receiver domain EMK97_RS09450 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS09460 PF00578 AhpC/TSA family EMK97_RS09470 PF00480 ROK family EMK97_RS09475 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain EMK97_RS09475 PF02838 Glycosyl hydrolase family 20, domain 2 EMK97_RS09475 PF00728 Glycosyl hydrolase family 20, catalytic domain EMK97_RS09475 PF03173 Putative carbohydrate binding domain EMK97_RS09480 PF07690 Major Facilitator Superfamily EMK97_RS09485 PF00593 TonB dependent receptor EMK97_RS09485 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS09495 PF05552 Conserved TM helix EMK97_RS09495 PF00924 Mechanosensitive ion channel EMK97_RS09505 PF00933 Glycosyl hydrolase family 3 N terminal domain EMK97_RS09515 PF07690 Major Facilitator Superfamily EMK97_RS09520 PF00155 Aminotransferase class I and II EMK97_RS09520 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS09530 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain EMK97_RS09540 PF01368 DHH family EMK97_RS09540 PF02833 DHHA2 domain EMK97_RS09545 PF00108 Thiolase, N-terminal domain EMK97_RS09545 PF02803 Thiolase, C-terminal domain EMK97_RS09550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain EMK97_RS09550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain EMK97_RS09550 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS09560 PF00563 EAL domain EMK97_RS09560 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS09560 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS09570 PF01507 Phosphoadenosine phosphosulfate reductase family EMK97_RS09575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EMK97_RS09575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EMK97_RS09580 PF00175 Oxidoreductase NAD-binding domain EMK97_RS09580 PF00667 FAD binding domain EMK97_RS09580 PF00258 Flavodoxin EMK97_RS09585 PF01464 Transglycosylase SLT domain EMK97_RS09605 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS09620 PF04012 PspA/IM30 family EMK97_RS09630 PF01207 Dihydrouridine synthase (Dus) EMK97_RS09635 PF00589 Phage integrase family EMK97_RS09640 PF02384 N-6 DNA Methylase EMK97_RS09680 PF01443 Viral (Superfamily 1) RNA helicase EMK97_RS09680 PF17841 BID domain of Bartonella effector protein (Bep) EMK97_RS09680 PF03389 MobA/MobL family EMK97_RS09725 PF01475 Ferric uptake regulator family EMK97_RS09735 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS09735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS09735 PF00672 HAMP domain EMK97_RS09740 PF02441 Flavoprotein EMK97_RS09745 PF01327 Polypeptide deformylase EMK97_RS09750 PF01225 Mur ligase family, catalytic domain EMK97_RS09750 PF08245 Mur ligase middle domain EMK97_RS09750 PF02875 Mur ligase family, glutamate ligase domain EMK97_RS09765 PF00120 Glutamine synthetase, catalytic domain EMK97_RS09765 PF03951 Glutamine synthetase, beta-Grasp domain EMK97_RS09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS09775 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS09775 PF00989 PAS fold EMK97_RS09780 PF02954 Bacterial regulatory protein, Fis family EMK97_RS09780 PF00158 Sigma-54 interaction domain EMK97_RS09780 PF00072 Response regulator receiver domain EMK97_RS09800 PF00152 tRNA synthetases class II (D, K and N) EMK97_RS09805 PF03144 Elongation factor Tu domain 2 EMK97_RS09805 PF03143 Elongation factor Tu C-terminal domain EMK97_RS09805 PF00009 Elongation factor Tu GTP binding domain EMK97_RS09810 PF03144 Elongation factor Tu domain 2 EMK97_RS09810 PF14492 Elongation Factor G, domain II EMK97_RS09810 PF00679 Elongation factor G C-terminus EMK97_RS09810 PF03764 Elongation factor G, domain IV EMK97_RS09810 PF00009 Elongation factor Tu GTP binding domain EMK97_RS09815 PF00177 Ribosomal protein S7p/S5e EMK97_RS09820 PF00164 Ribosomal protein S12/S23 EMK97_RS09825 PF04998 RNA polymerase Rpb1, domain 5 EMK97_RS09825 PF05000 RNA polymerase Rpb1, domain 4 EMK97_RS09825 PF04983 RNA polymerase Rpb1, domain 3 EMK97_RS09825 PF04997 RNA polymerase Rpb1, domain 1 EMK97_RS09825 PF00623 RNA polymerase Rpb1, domain 2 EMK97_RS09830 PF04561 RNA polymerase Rpb2, domain 2 EMK97_RS09830 PF04563 RNA polymerase beta subunit EMK97_RS09830 PF04560 RNA polymerase Rpb2, domain 7 EMK97_RS09830 PF10385 RNA polymerase beta subunit external 1 domain EMK97_RS09830 PF04565 RNA polymerase Rpb2, domain 3 EMK97_RS09830 PF00562 RNA polymerase Rpb2, domain 6 EMK97_RS09835 PF00542 Ribosomal protein L7/L12 C-terminal domain EMK97_RS09835 PF16320 Ribosomal protein L7/L12 dimerisation domain EMK97_RS09840 PF00466 Ribosomal protein L10 EMK97_RS09845 PF00687 Ribosomal protein L1p/L10e family EMK97_RS09850 PF00298 Ribosomal protein L11, RNA binding domain EMK97_RS09850 PF03946 Ribosomal protein L11, N-terminal domain EMK97_RS09855 PF02357 Transcription termination factor nusG EMK97_RS09855 PF00467 KOW motif EMK97_RS09860 PF00584 SecE/Sec61-gamma subunits of protein translocation complex EMK97_RS09870 PF03144 Elongation factor Tu domain 2 EMK97_RS09870 PF00009 Elongation factor Tu GTP binding domain EMK97_RS09870 PF03143 Elongation factor Tu C-terminal domain EMK97_RS09895 PF03309 Type III pantothenate kinase EMK97_RS09900 PF03099 Biotin/lipoate A/B protein ligase family EMK97_RS09900 PF08279 HTH domain EMK97_RS09900 PF02237 Biotin protein ligase C terminal domain EMK97_RS09905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EMK97_RS09905 PF01565 FAD binding domain EMK97_RS09910 PF01566 Natural resistance-associated macrophage protein EMK97_RS09915 PF01112 Asparaginase EMK97_RS09920 PF03553 Na+/H+ antiporter family EMK97_RS09940 PF03702 Anhydro-N-acetylmuramic acid kinase EMK97_RS09950 PF00579 tRNA synthetases class I (W and Y) EMK97_RS09955 PF04205 FMN-binding domain EMK97_RS09955 PF12801 4Fe-4S binding domain EMK97_RS09960 PF18764 Nitrous oxide reductase propeller repeat EMK97_RS09960 PF18793 Nitrous oxide reductase propeller repeat 2 EMK97_RS09965 PF01645 Conserved region in glutamate synthase EMK97_RS09970 PF05048 Periplasmic copper-binding protein (NosD) EMK97_RS09975 PF00005 ABC transporter EMK97_RS09980 PF12679 ABC-2 family transporter protein EMK97_RS09985 PF05573 NosL EMK97_RS10015 PF03458 UPF0126 domain EMK97_RS10020 PF00581 Rhodanese-like domain EMK97_RS10030 PF01048 Phosphorylase superfamily EMK97_RS10055 PF02311 AraC-like ligand binding domain EMK97_RS10055 PF12833 Helix-turn-helix domain EMK97_RS10060 PF00109 Beta-ketoacyl synthase, N-terminal domain EMK97_RS10060 PF02801 Beta-ketoacyl synthase, C-terminal domain EMK97_RS10070 PF01131 DNA topoisomerase EMK97_RS10070 PF01751 Toprim domain EMK97_RS10085 PF07885 Ion channel EMK97_RS10090 PF03616 Sodium/glutamate symporter EMK97_RS10110 PF00583 Acetyltransferase (GNAT) family EMK97_RS10115 PF07676 WD40-like Beta Propeller Repeat EMK97_RS10115 PF00326 Prolyl oligopeptidase family EMK97_RS10115 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EMK97_RS10120 PF00581 Rhodanese-like domain EMK97_RS10120 PF17773 UPF0176 acylphosphatase like domain EMK97_RS10135 PF01292 Prokaryotic cytochrome b561 EMK97_RS10140 PF11791 Aconitate B N-terminal domain EMK97_RS10140 PF06434 Aconitate hydratase 2 N-terminus EMK97_RS10140 PF00330 Aconitase family (aconitate hydratase) EMK97_RS10145 PF00330 Aconitase family (aconitate hydratase) EMK97_RS10145 PF11791 Aconitate B N-terminal domain EMK97_RS10145 PF06434 Aconitate hydratase 2 N-terminus EMK97_RS10160 PF01204 Trehalase EMK97_RS10180 PF00202 Aminotransferase class-III EMK97_RS10185 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EMK97_RS10185 PF00703 Glycosyl hydrolases family 2 EMK97_RS10185 PF16353 Domain of unknown function(DUF4981) EMK97_RS10185 PF02929 Beta galactosidase small chain EMK97_RS10185 PF02837 Glycosyl hydrolases family 2, sugar binding domain EMK97_RS10190 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS10190 PF07729 FCD domain EMK97_RS10205 PF08279 HTH domain EMK97_RS10205 PF13280 WYL domain EMK97_RS10215 PF01752 Collagenase EMK97_RS10215 PF08453 Peptidase family M9 N-terminal EMK97_RS10220 PF01613 Flavin reductase like domain EMK97_RS10230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EMK97_RS10230 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS10235 PF00364 Biotin-requiring enzyme EMK97_RS10235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EMK97_RS10235 PF02817 e3 binding domain EMK97_RS10240 PF00456 Transketolase, thiamine diphosphate binding domain EMK97_RS10240 PF17831 Pyruvate dehydrogenase E1 component middle domain EMK97_RS10245 PF07729 FCD domain EMK97_RS10245 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS10255 PF01510 N-acetylmuramoyl-L-alanine amidase EMK97_RS10265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain EMK97_RS10265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain EMK97_RS10270 PF03466 LysR substrate binding domain EMK97_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS10275 PF01810 LysE type translocator EMK97_RS10290 PF01625 Peptide methionine sulfoxide reductase EMK97_RS10295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS10300 PF00072 Response regulator receiver domain EMK97_RS10310 PF12843 Putative quorum-sensing-regulated virulence factor EMK97_RS10315 PF04957 Ribosome modulation factor EMK97_RS10320 PF04055 Radical SAM superfamily EMK97_RS10320 PF06969 HemN C-terminal domain EMK97_RS10335 PF04220 Der GTPase activator (YihI) EMK97_RS10350 PF00924 Mechanosensitive ion channel EMK97_RS10355 PF01553 Acyltransferase EMK97_RS10360 PF01472 PUA domain EMK97_RS10360 PF00696 Amino acid kinase family EMK97_RS10365 PF00171 Aldehyde dehydrogenase family EMK97_RS10375 PF00510 Cytochrome c oxidase subunit III EMK97_RS10380 PF12801 4Fe-4S binding domain EMK97_RS10380 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EMK97_RS10380 PF13746 4Fe-4S dicluster domain EMK97_RS10385 PF00158 Sigma-54 interaction domain EMK97_RS10385 PF02954 Bacterial regulatory protein, Fis family EMK97_RS10385 PF01590 GAF domain EMK97_RS10405 PF01925 Sulfite exporter TauE/SafE EMK97_RS10410 PF06865 Pyrimidine/purine nucleoside phosphorylase EMK97_RS10415 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain EMK97_RS10415 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain EMK97_RS10420 PF03466 LysR substrate binding domain EMK97_RS10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS10425 PF13335 Magnesium chelatase, subunit ChlI C-terminal EMK97_RS10425 PF01078 Magnesium chelatase, subunit ChlI EMK97_RS10430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EMK97_RS10430 PF00205 Thiamine pyrophosphate enzyme, central domain EMK97_RS10430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EMK97_RS10440 PF01063 Amino-transferase class IV EMK97_RS10445 PF00920 Dehydratase family EMK97_RS10450 PF00585 C-terminal regulatory domain of Threonine dehydratase EMK97_RS10450 PF00291 Pyridoxal-phosphate dependent enzyme EMK97_RS10455 PF02082 Transcriptional regulator EMK97_RS10460 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS10465 PF09313 Domain of unknown function (DUF1971) EMK97_RS10485 PF00775 Dioxygenase EMK97_RS10485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal EMK97_RS10510 PF00708 Acylphosphatase EMK97_RS10530 PF12833 Helix-turn-helix domain EMK97_RS10535 PF00583 Acetyltransferase (GNAT) family EMK97_RS10545 PF00881 Nitroreductase family EMK97_RS10590 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS10590 PF18500 CadC C-terminal domain 1 EMK97_RS10600 PF01520 N-acetylmuramoyl-L-alanine amidase EMK97_RS10610 PF13657 HipA N-terminal domain EMK97_RS10610 PF07804 HipA-like C-terminal domain EMK97_RS10635 PF00145 C-5 cytosine-specific DNA methylase EMK97_RS10640 PF09553 Eco47II restriction endonuclease EMK97_RS10655 PF00072 Response regulator receiver domain EMK97_RS10655 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS10660 PF00210 Ferritin-like domain EMK97_RS10665 PF04445 Putative SAM-dependent methyltransferase EMK97_RS10690 PF01553 Acyltransferase EMK97_RS10705 PF05494 MlaC protein EMK97_RS10715 PF00483 Nucleotidyl transferase EMK97_RS10720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component EMK97_RS10725 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component EMK97_RS10730 PF03480 Bacterial extracellular solute-binding protein, family 7 EMK97_RS10735 PF01040 UbiA prenyltransferase family EMK97_RS10740 PF04345 Chorismate lyase EMK97_RS10760 PF01694 Rhomboid family EMK97_RS10760 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease EMK97_RS10765 PF00581 Rhodanese-like domain EMK97_RS10770 PF00107 Zinc-binding dehydrogenase EMK97_RS10770 PF08240 Alcohol dehydrogenase GroES-like domain EMK97_RS10775 PF00155 Aminotransferase class I and II EMK97_RS10780 PF01037 Lrp/AsnC ligand binding domain EMK97_RS10790 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) EMK97_RS10815 PF00156 Phosphoribosyl transferase domain EMK97_RS10820 PF03725 3' exoribonuclease family, domain 2 EMK97_RS10820 PF01138 3' exoribonuclease family, domain 1 EMK97_RS10825 PF11412 Disulphide bond corrector protein DsbC EMK97_RS10825 PF02683 Cytochrome C biogenesis protein transmembrane region EMK97_RS10825 PF00085 Thioredoxin EMK97_RS10835 PF00732 GMC oxidoreductase EMK97_RS10835 PF05199 GMC oxidoreductase EMK97_RS10845 PF08340 Domain of unknown function (DUF1732) EMK97_RS10845 PF03755 YicC-like family, N-terminal region EMK97_RS10895 PF04337 Protein of unknown function, DUF480 EMK97_RS10900 PF02146 Sir2 family EMK97_RS10905 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS10905 PF08448 PAS fold EMK97_RS10910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS10910 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS10910 PF00497 Bacterial extracellular solute-binding proteins, family 3 EMK97_RS10920 PF02368 Bacterial Ig-like domain (group 2) EMK97_RS10920 PF11999 Protein of unknown function (DUF3494) EMK97_RS10955 PF00795 Carbon-nitrogen hydrolase EMK97_RS10970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain EMK97_RS10970 PF00326 Prolyl oligopeptidase family EMK97_RS10980 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS10980 PF00072 Response regulator receiver domain EMK97_RS10990 PF09382 RQC domain EMK97_RS10990 PF00271 Helicase conserved C-terminal domain EMK97_RS10990 PF00570 HRDC domain EMK97_RS10990 PF00270 DEAD/DEAH box helicase EMK97_RS10990 PF16124 RecQ zinc-binding EMK97_RS10995 PF03061 Thioesterase superfamily EMK97_RS11010 PF00672 HAMP domain EMK97_RS11010 PF02743 Cache domain EMK97_RS11010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS11020 PF00892 EamA-like transporter family EMK97_RS11025 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS11025 PF00072 Response regulator receiver domain EMK97_RS11030 PF13361 UvrD-like helicase C-terminal domain EMK97_RS11030 PF00580 UvrD/REP helicase N-terminal domain EMK97_RS11035 PF13419 Haloacid dehalogenase-like hydrolase EMK97_RS11045 PF01678 Diaminopimelate epimerase EMK97_RS11055 PF01491 Frataxin-like domain EMK97_RS11060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain EMK97_RS11060 PF03900 Porphobilinogen deaminase, C-terminal domain EMK97_RS11065 PF02602 Uroporphyrinogen-III synthase HemD EMK97_RS11070 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase EMK97_RS11075 PF07719 Tetratricopeptide repeat EMK97_RS11075 PF07219 HemY protein N-terminus EMK97_RS11080 PF16187 Middle or third domain of peptidase_M16 EMK97_RS11080 PF00675 Insulinase (Peptidase family M16) EMK97_RS11080 PF05193 Peptidase M16 inactive domain EMK97_RS11090 PF00175 Oxidoreductase NAD-binding domain EMK97_RS11095 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EMK97_RS11100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EMK97_RS11100 PF07498 Rho termination factor, N-terminal domain EMK97_RS11100 PF07497 Rho termination factor, RNA-binding domain EMK97_RS11105 PF00085 Thioredoxin EMK97_RS11110 PF00270 DEAD/DEAH box helicase EMK97_RS11110 PF00271 Helicase conserved C-terminal domain EMK97_RS11115 PF02541 Ppx/GppA phosphatase family EMK97_RS11130 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS11140 PF00490 Delta-aminolevulinic acid dehydratase EMK97_RS11145 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS11150 PF01026 TatD related DNase EMK97_RS11160 PF00902 Sec-independent protein translocase protein (TatC) EMK97_RS11165 PF02416 mttA/Hcf106 family EMK97_RS11170 PF02416 mttA/Hcf106 family EMK97_RS11175 PF00593 TonB dependent receptor EMK97_RS11175 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS11180 PF00140 Sigma-70 factor, region 1.2 EMK97_RS11180 PF04542 Sigma-70 region 2 EMK97_RS11180 PF04545 Sigma-70, region 4 EMK97_RS11185 PF18075 FtsX extracellular domain EMK97_RS11190 PF00005 ABC transporter EMK97_RS11195 PF02881 SRP54-type protein, helical bundle domain EMK97_RS11195 PF00448 SRP54-type protein, GTPase domain EMK97_RS11205 PF00753 Metallo-beta-lactamase superfamily EMK97_RS11215 PF04222 Protein of unknown function (DUF416) EMK97_RS11240 PF00216 Bacterial DNA-binding protein EMK97_RS11250 PF00582 Universal stress protein family EMK97_RS11265 PF01380 SIS domain EMK97_RS11270 PF00455 DeoR C terminal sensor domain EMK97_RS11270 PF08220 DeoR-like helix-turn-helix domain EMK97_RS11275 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS11275 PF14602 Hexapeptide repeat of succinyl-transferase EMK97_RS11275 PF12804 MobA-like NTP transferase domain EMK97_RS11290 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EMK97_RS11290 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EMK97_RS11295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EMK97_RS11295 PF02874 ATP synthase alpha/beta family, beta-barrel domain EMK97_RS11300 PF00231 ATP synthase EMK97_RS11305 PF02874 ATP synthase alpha/beta family, beta-barrel domain EMK97_RS11305 PF00306 ATP synthase alpha/beta chain, C terminal domain EMK97_RS11305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EMK97_RS11310 PF00213 ATP synthase delta (OSCP) subunit EMK97_RS11315 PF00430 ATP synthase B/B' CF(0) EMK97_RS11320 PF00137 ATP synthase subunit C EMK97_RS11325 PF00119 ATP synthase A chain EMK97_RS11330 PF03899 ATP synthase I chain EMK97_RS11380 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS11390 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EMK97_RS11390 PF01488 Shikimate / quinate 5-dehydrogenase EMK97_RS11390 PF08501 Shikimate dehydrogenase substrate binding domain EMK97_RS11395 PF03922 OmpW family EMK97_RS11400 PF01152 Bacterial-like globin EMK97_RS11405 PF01218 Coproporphyrinogen III oxidase EMK97_RS11410 PF01300 Telomere recombination EMK97_RS11415 PF00731 AIR carboxylase EMK97_RS11420 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EMK97_RS11420 PF02222 ATP-grasp domain EMK97_RS11425 PF01131 DNA topoisomerase EMK97_RS11425 PF01751 Toprim domain EMK97_RS11425 PF01396 Topoisomerase DNA binding C4 zinc finger EMK97_RS11430 PF04361 Protein of unknown function (DUF494) EMK97_RS11435 PF17782 DprA winged helix domain EMK97_RS11435 PF02481 DNA recombination-mediator protein A EMK97_RS11445 PF01327 Polypeptide deformylase EMK97_RS11450 PF02911 Formyl transferase, C-terminal domain EMK97_RS11450 PF00551 Formyl transferase EMK97_RS11455 PF01189 16S rRNA methyltransferase RsmB/F EMK97_RS11455 PF01029 NusB family EMK97_RS11460 PF02080 TrkA-C domain EMK97_RS11460 PF02254 TrkA-N domain EMK97_RS11470 PF02386 Cation transport protein EMK97_RS11475 PF09186 Domain of unknown function (DUF1949) EMK97_RS11475 PF01205 Uncharacterized protein family UPF0029 EMK97_RS11480 PF00557 Metallopeptidase family M24 EMK97_RS11485 PF14718 Soluble lytic murein transglycosylase L domain EMK97_RS11485 PF01464 Transglycosylase SLT domain EMK97_RS11490 PF01206 Sulfurtransferase TusA EMK97_RS11505 PF05746 DALR anticodon binding domain EMK97_RS11505 PF02092 Glycyl-tRNA synthetase beta subunit EMK97_RS11510 PF02091 Glycyl-tRNA synthetase alpha subunit EMK97_RS11515 PF00204 DNA gyrase B EMK97_RS11515 PF18053 DNA gyrase B subunit insert domain EMK97_RS11515 PF00986 DNA gyrase B subunit, carboxyl terminus EMK97_RS11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS11515 PF01751 Toprim domain EMK97_RS11520 PF02463 RecF/RecN/SMC N terminal domain EMK97_RS11525 PF02767 DNA polymerase III beta subunit, central domain EMK97_RS11525 PF02768 DNA polymerase III beta subunit, C-terminal domain EMK97_RS11525 PF00712 DNA polymerase III beta subunit, N-terminal domain EMK97_RS11530 PF11638 DnaA N-terminal domain EMK97_RS11530 PF00308 Bacterial dnaA protein EMK97_RS11530 PF08299 Bacterial dnaA protein helix-turn-helix EMK97_RS11535 PF00468 Ribosomal protein L34 EMK97_RS11540 PF00825 Ribonuclease P EMK97_RS11545 PF01809 Putative membrane protein insertion efficiency factor EMK97_RS11550 PF02096 60Kd inner membrane protein EMK97_RS11550 PF14849 YidC periplasmic domain EMK97_RS11555 PF10396 GTP-binding protein TrmE N-terminus EMK97_RS11555 PF12631 MnmE helical domain EMK97_RS11555 PF01926 50S ribosome-binding GTPase EMK97_RS11565 PF00258 Flavodoxin EMK97_RS11570 PF13932 GidA associated domain EMK97_RS11570 PF01134 Glucose inhibited division protein A EMK97_RS11575 PF02527 rRNA small subunit methyltransferase G EMK97_RS11580 PF13614 AAA domain EMK97_RS11585 PF17762 HTH domain found in ParB protein EMK97_RS11585 PF02195 ParB-like nuclease domain EMK97_RS11590 PF13340 Putative transposase of IS4/5 family (DUF4096) EMK97_RS11595 PF13006 Insertion element 4 transposase N-terminal EMK97_RS11595 PF01609 Transposase DDE domain EMK97_RS11610 PF02687 FtsX-like permease family EMK97_RS11610 PF12704 MacB-like periplasmic core domain EMK97_RS11615 PF00005 ABC transporter EMK97_RS11615 PF12704 MacB-like periplasmic core domain EMK97_RS11615 PF02687 FtsX-like permease family EMK97_RS11630 PF00005 ABC transporter EMK97_RS11645 PF08448 PAS fold EMK97_RS11645 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS11660 PF00873 AcrB/AcrD/AcrF family EMK97_RS11670 PF00158 Sigma-54 interaction domain EMK97_RS11670 PF00072 Response regulator receiver domain EMK97_RS11670 PF02954 Bacterial regulatory protein, Fis family EMK97_RS11675 PF01471 Putative peptidoglycan binding domain EMK97_RS11675 PF13401 AAA domain EMK97_RS11685 PF13614 AAA domain EMK97_RS11700 PF02397 Bacterial sugar transferase EMK97_RS11705 PF01522 Polysaccharide deacetylase EMK97_RS11715 PF08323 Starch synthase catalytic domain EMK97_RS11715 PF00534 Glycosyl transferases group 1 EMK97_RS11725 PF00534 Glycosyl transferases group 1 EMK97_RS11725 PF13439 Glycosyltransferase Family 4 EMK97_RS11730 PF00733 Asparagine synthase EMK97_RS11730 PF13537 Glutamine amidotransferase domain EMK97_RS11735 PF00534 Glycosyl transferases group 1 EMK97_RS11740 PF13439 Glycosyltransferase Family 4 EMK97_RS11740 PF00534 Glycosyl transferases group 1 EMK97_RS11795 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EMK97_RS11795 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EMK97_RS11795 PF02142 MGS-like domain EMK97_RS11810 PF01050 Mannose-6-phosphate isomerase EMK97_RS11810 PF00483 Nucleotidyl transferase EMK97_RS11825 PF03062 MBOAT, membrane-bound O-acyltransferase family EMK97_RS11835 PF01432 Peptidase family M3 EMK97_RS11840 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS11840 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS11840 PF00563 EAL domain EMK97_RS11850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EMK97_RS11850 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS11855 PF00593 TonB dependent receptor EMK97_RS11855 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS11865 PF01494 FAD binding domain EMK97_RS11870 PF01965 DJ-1/PfpI family EMK97_RS11870 PF12833 Helix-turn-helix domain EMK97_RS11880 PF01612 3'-5' exonuclease EMK97_RS11880 PF00476 DNA polymerase family A EMK97_RS11880 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EMK97_RS11880 PF01367 5'-3' exonuclease, C-terminal SAM fold EMK97_RS11890 PF00271 Helicase conserved C-terminal domain EMK97_RS11890 PF00270 DEAD/DEAH box helicase EMK97_RS11890 PF17191 RecG wedge domain EMK97_RS11895 PF00588 SpoU rRNA Methylase family EMK97_RS11895 PF12105 SpoU, rRNA methylase, C-terminal EMK97_RS11900 PF01042 Endoribonuclease L-PSP EMK97_RS11905 PF04607 Region found in RelA / SpoT proteins EMK97_RS11905 PF02824 TGS domain EMK97_RS11905 PF13291 ACT domain EMK97_RS11910 PF01192 RNA polymerase Rpb6 EMK97_RS11915 PF00625 Guanylate kinase EMK97_RS11920 PF00155 Aminotransferase class I and II EMK97_RS11935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EMK97_RS11945 PF01272 Transcription elongation factor, GreA/GreB, C-term EMK97_RS11945 PF03449 Transcription elongation factor, N-terminal EMK97_RS11950 PF17674 HHH domain EMK97_RS11950 PF00575 S1 RNA binding domain EMK97_RS11950 PF09371 Tex-like protein N-terminal domain EMK97_RS11950 PF16921 Tex protein YqgF-like domain EMK97_RS11955 PF00672 HAMP domain EMK97_RS11955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS11955 PF17200 Single Cache domain 2 EMK97_RS11965 PF00672 HAMP domain EMK97_RS11965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS11965 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS11970 PF00072 Response regulator receiver domain EMK97_RS11970 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS11975 PF00206 Lyase EMK97_RS11975 PF10415 Fumarase C C-terminus EMK97_RS11980 PF03466 LysR substrate binding domain EMK97_RS11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS11990 PF07676 WD40-like Beta Propeller Repeat EMK97_RS11990 PF00326 Prolyl oligopeptidase family EMK97_RS12005 PF02789 Cytosol aminopeptidase family, N-terminal domain EMK97_RS12005 PF00883 Cytosol aminopeptidase family, catalytic domain EMK97_RS12025 PF00474 Sodium:solute symporter family EMK97_RS12040 PF04973 Nicotinamide mononucleotide transporter EMK97_RS12055 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS12055 PF13493 Domain of unknown function (DUF4118) EMK97_RS12055 PF00582 Universal stress protein family EMK97_RS12055 PF02702 Osmosensitive K+ channel His kinase sensor domain EMK97_RS12060 PF00664 ABC transporter transmembrane region EMK97_RS12060 PF00005 ABC transporter EMK97_RS12075 PF13193 AMP-binding enzyme C-terminal domain EMK97_RS12075 PF00550 Phosphopantetheine attachment site EMK97_RS12075 PF07993 Male sterility protein EMK97_RS12075 PF00668 Condensation domain EMK97_RS12075 PF00501 AMP-binding enzyme EMK97_RS12080 PF00072 Response regulator receiver domain EMK97_RS12080 PF00196 Bacterial regulatory proteins, luxR family EMK97_RS12090 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS12090 PF00593 TonB dependent receptor EMK97_RS12100 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS12100 PF17158 Membrane-associated sensor, integral membrane domain EMK97_RS12115 PF01546 Peptidase family M20/M25/M40 EMK97_RS12115 PF07687 Peptidase dimerisation domain EMK97_RS12120 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS12125 PF02441 Flavoprotein EMK97_RS12125 PF04127 DNA / pantothenate metabolism flavoprotein EMK97_RS12130 PF04002 RadC-like JAB domain EMK97_RS12140 PF07015 VirC1 protein EMK97_RS12150 PF00830 Ribosomal L28 family EMK97_RS12155 PF00471 Ribosomal protein L33 EMK97_RS12165 PF06827 Zinc finger found in FPG and IleRS EMK97_RS12165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EMK97_RS12165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EMK97_RS12170 PF01467 Cytidylyltransferase-like EMK97_RS12175 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS12175 PF08360 QacR-like protein, C-terminal region EMK97_RS12190 PF00561 alpha/beta hydrolase fold EMK97_RS12195 PF00156 Phosphoribosyl transferase domain EMK97_RS12205 PF01521 Iron-sulphur cluster biosynthesis EMK97_RS12205 PF01106 NifU-like domain EMK97_RS12225 PF01554 MatE EMK97_RS12235 PF02630 SCO1/SenC EMK97_RS12240 PF01040 UbiA prenyltransferase family EMK97_RS12260 PF00510 Cytochrome c oxidase subunit III EMK97_RS12265 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 EMK97_RS12270 PF00115 Cytochrome C and Quinol oxidase polypeptide I EMK97_RS12275 PF02790 Cytochrome C oxidase subunit II, transmembrane domain EMK97_RS12275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain EMK97_RS12280 PF01726 LexA DNA binding domain EMK97_RS12280 PF00717 Peptidase S24-like EMK97_RS12290 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS12290 PF00593 TonB dependent receptor EMK97_RS12295 PF01609 Transposase DDE domain EMK97_RS12295 PF13006 Insertion element 4 transposase N-terminal EMK97_RS12340 PF03466 LysR substrate binding domain EMK97_RS12340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS12365 PF01964 Radical SAM ThiC family EMK97_RS12365 PF13667 ThiC-associated domain EMK97_RS12370 PF01266 FAD dependent oxidoreductase EMK97_RS12380 PF05690 Thiazole biosynthesis protein ThiG EMK97_RS12385 PF02581 Thiamine monophosphate synthase EMK97_RS12395 PF01381 Helix-turn-helix EMK97_RS12405 PF03099 Biotin/lipoate A/B protein ligase family EMK97_RS12425 PF02371 Transposase IS116/IS110/IS902 family EMK97_RS12425 PF01548 Transposase EMK97_RS12430 PF01226 Formate/nitrite transporter EMK97_RS12440 PF02470 MlaD protein EMK97_RS12445 PF04403 Paraquat-inducible protein A EMK97_RS12455 PF00034 Cytochrome c EMK97_RS12460 PF01926 50S ribosome-binding GTPase EMK97_RS12485 PF00593 TonB dependent receptor EMK97_RS12485 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS12510 PF00873 AcrB/AcrD/AcrF family EMK97_RS12535 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS12535 PF00072 Response regulator receiver domain EMK97_RS12540 PF00593 TonB dependent receptor EMK97_RS12540 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS12550 PF01810 LysE type translocator EMK97_RS12570 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS12605 PF17820 PDZ domain EMK97_RS12605 PF02163 Peptidase family M50 EMK97_RS12630 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ EMK97_RS12640 PF13508 Acetyltransferase (GNAT) domain EMK97_RS12645 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS12645 PF00593 TonB dependent receptor EMK97_RS12655 PF00873 AcrB/AcrD/AcrF family EMK97_RS12670 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EMK97_RS12670 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EMK97_RS12675 PF06029 AlkA N-terminal domain EMK97_RS12675 PF00730 HhH-GPD superfamily base excision DNA repair protein EMK97_RS12685 PF04960 Glutaminase EMK97_RS12710 PF00005 ABC transporter EMK97_RS12720 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS12720 PF00672 HAMP domain EMK97_RS12720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS12725 PF01209 ubiE/COQ5 methyltransferase family EMK97_RS12735 PF03109 ABC1 family EMK97_RS12740 PF13361 UvrD-like helicase C-terminal domain EMK97_RS12740 PF00580 UvrD/REP helicase N-terminal domain EMK97_RS12745 PF04380 Membrane fusogenic activity EMK97_RS12750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EMK97_RS12750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EMK97_RS12750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EMK97_RS12750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EMK97_RS12775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain EMK97_RS12775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain EMK97_RS12775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain EMK97_RS12795 PF00034 Cytochrome c EMK97_RS12805 PF04463 Protein of unknown function (DUF523) EMK97_RS12820 PF08331 Domain of unknown function (DUF1730) EMK97_RS12825 PF03853 YjeF-related protein N-terminus EMK97_RS12825 PF01256 Carbohydrate kinase EMK97_RS12830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EMK97_RS12835 PF01520 N-acetylmuramoyl-L-alanine amidase EMK97_RS12840 PF08676 MutL C terminal dimerisation domain EMK97_RS12840 PF01119 DNA mismatch repair protein, C-terminal domain EMK97_RS12850 PF17209 Hfq protein EMK97_RS12855 PF13167 GTP-binding GTPase N-terminal EMK97_RS12855 PF01926 50S ribosome-binding GTPase EMK97_RS12855 PF16360 GTP-binding GTPase Middle Region EMK97_RS12860 PF01145 SPFH domain / Band 7 family EMK97_RS12860 PF12221 Bacterial membrane protein N terminal EMK97_RS12865 PF01145 SPFH domain / Band 7 family EMK97_RS12875 PF00709 Adenylosuccinate synthetase EMK97_RS12885 PF05958 tRNA (Uracil-5-)-methyltransferase EMK97_RS12890 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS12900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EMK97_RS12900 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS12910 PF03949 Malic enzyme, NAD binding domain EMK97_RS12910 PF00390 Malic enzyme, N-terminal domain EMK97_RS12945 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS12950 PF01810 LysE type translocator EMK97_RS12955 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS12980 PF00899 ThiF family EMK97_RS12985 PF02391 MoaE protein EMK97_RS12990 PF02597 ThiS family EMK97_RS12995 PF01967 MoaC family EMK97_RS13000 PF00994 Probable molybdopterin binding domain EMK97_RS13005 PF12804 MobA-like NTP transferase domain EMK97_RS13010 PF04055 Radical SAM superfamily EMK97_RS13010 PF06463 Molybdenum Cofactor Synthesis C EMK97_RS13015 PF03454 MoeA C-terminal region (domain IV) EMK97_RS13015 PF00994 Probable molybdopterin binding domain EMK97_RS13015 PF03453 MoeA N-terminal region (domain I and II) EMK97_RS13025 PF00202 Aminotransferase class-III EMK97_RS13030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EMK97_RS13030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EMK97_RS13040 PF03653 Uncharacterised protein family (UPF0093) EMK97_RS13045 PF00654 Voltage gated chloride channel EMK97_RS13055 PF01521 Iron-sulphur cluster biosynthesis EMK97_RS13060 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS13060 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS13060 PF00563 EAL domain EMK97_RS13070 PF00873 AcrB/AcrD/AcrF family EMK97_RS13075 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS13080 PF11871 Domain of unknown function (DUF3391) EMK97_RS13080 PF01966 HD domain EMK97_RS13085 PF08238 Sel1 repeat EMK97_RS13090 PF08461 Ribonuclease R winged-helix domain EMK97_RS13090 PF08206 Ribonuclease B OB domain EMK97_RS13090 PF00773 RNB domain EMK97_RS13090 PF00575 S1 RNA binding domain EMK97_RS13090 PF17876 Cold shock domain EMK97_RS13095 PF08032 RNA 2'-O ribose methyltransferase substrate binding EMK97_RS13095 PF00588 SpoU rRNA Methylase family EMK97_RS13100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS13100 PF00672 HAMP domain EMK97_RS13100 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS13105 PF01250 Ribosomal protein S6 EMK97_RS13110 PF00436 Single-strand binding protein family EMK97_RS13115 PF01084 Ribosomal protein S18 EMK97_RS13120 PF03948 Ribosomal protein L9, C-terminal domain EMK97_RS13120 PF01281 Ribosomal protein L9, N-terminal domain EMK97_RS13145 PF00263 Bacterial type II and III secretion system protein EMK97_RS13145 PF03958 Bacterial type II/III secretion system short domain EMK97_RS13150 PF13401 AAA domain EMK97_RS13150 PF01471 Putative peptidoglycan binding domain EMK97_RS13160 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EMK97_RS13160 PF00437 Type II/IV secretion system protein EMK97_RS13165 PF00482 Type II secretion system (T2SS), protein F EMK97_RS13175 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS13180 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS13185 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS13185 PF00114 Pilin (bacterial filament) EMK97_RS13215 PF04085 rod shape-determining protein MreC EMK97_RS13220 PF04093 rod shape-determining protein MreD EMK97_RS13225 PF02545 Maf-like protein EMK97_RS13230 PF00575 S1 RNA binding domain EMK97_RS13230 PF10150 Ribonuclease E/G family EMK97_RS13235 PF13502 AsmA-like C-terminal region EMK97_RS13235 PF13116 Protein of unknown function EMK97_RS13240 PF00795 Carbon-nitrogen hydrolase EMK97_RS13245 PF01523 Putative modulator of DNA gyrase EMK97_RS13255 PF04751 Protein of unknown function (DUF615) EMK97_RS13260 PF01523 Putative modulator of DNA gyrase EMK97_RS13265 PF00571 CBS domain EMK97_RS13265 PF03448 MgtE intracellular N domain EMK97_RS13265 PF01769 Divalent cation transporter EMK97_RS13270 PF00381 PTS HPr component phosphorylation site EMK97_RS13275 PF03668 P-loop ATPase protein family EMK97_RS13280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EMK97_RS13285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EMK97_RS13290 PF00309 Sigma-54 factor, Activator interacting domain (AID) EMK97_RS13290 PF04552 Sigma-54, DNA binding domain EMK97_RS13290 PF04963 Sigma-54 factor, core binding domain EMK97_RS13295 PF00005 ABC transporter EMK97_RS13295 PF12399 Branched-chain amino acid ATP-binding cassette transporter EMK97_RS13315 PF00571 CBS domain EMK97_RS13315 PF01380 SIS domain EMK97_RS13320 PF01699 Sodium/calcium exchanger protein EMK97_RS13325 PF00005 ABC transporter EMK97_RS13330 PF02405 Permease MlaE EMK97_RS13335 PF02470 MlaD protein EMK97_RS13340 PF05494 MlaC protein EMK97_RS13350 PF01722 BolA-like protein EMK97_RS13355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EMK97_RS13360 PF02112 cAMP phosphodiesterases class-II EMK97_RS13370 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EMK97_RS13370 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EMK97_RS13375 PF00501 AMP-binding enzyme EMK97_RS13375 PF13193 AMP-binding enzyme C-terminal domain EMK97_RS13385 PF17820 PDZ domain EMK97_RS13385 PF13180 PDZ domain EMK97_RS13390 PF04748 Divergent polysaccharide deacetylase EMK97_RS13395 PF01551 Peptidase family M23 EMK97_RS13400 PF01676 Metalloenzyme superfamily EMK97_RS13400 PF06415 BPG-independent PGAM N-terminus (iPGM_N) EMK97_RS13410 PF00462 Glutaredoxin EMK97_RS13415 PF02556 Preprotein translocase subunit SecB EMK97_RS13420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EMK97_RS13420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EMK97_RS13425 PF00588 SpoU rRNA Methylase family EMK97_RS13430 PF16916 Dimerisation domain of Zinc Transporter EMK97_RS13430 PF01545 Cation efflux family EMK97_RS13435 PF12146 Serine aminopeptidase, S33 EMK97_RS13440 PF16527 Two-component sensor protein CpxA, periplasmic domain EMK97_RS13440 PF00672 HAMP domain EMK97_RS13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS13440 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS13445 PF00072 Response regulator receiver domain EMK97_RS13445 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS13450 PF07813 LTXXQ motif family protein EMK97_RS13465 PF02666 Phosphatidylserine decarboxylase EMK97_RS13470 PF03193 RsgA GTPase EMK97_RS13475 PF00929 Exonuclease EMK97_RS13500 PF00326 Prolyl oligopeptidase family EMK97_RS13500 PF07676 WD40-like Beta Propeller Repeat EMK97_RS13505 PF13006 Insertion element 4 transposase N-terminal EMK97_RS13505 PF01609 Transposase DDE domain EMK97_RS13510 PF01979 Amidohydrolase family EMK97_RS13515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS13515 PF00672 HAMP domain EMK97_RS13520 PF00563 EAL domain EMK97_RS13525 PF03737 Aldolase/RraA EMK97_RS13530 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS13530 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS13530 PF00563 EAL domain EMK97_RS13535 PF00672 HAMP domain EMK97_RS13535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS13545 PF10431 C-terminal, D2-small domain, of ClpB protein EMK97_RS13545 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS13545 PF07724 AAA domain (Cdc48 subfamily) EMK97_RS13550 PF00227 Proteasome subunit EMK97_RS13560 PF00270 DEAD/DEAH box helicase EMK97_RS13560 PF18074 Primosomal protein N C-terminal domain EMK97_RS13560 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EMK97_RS13560 PF17764 3′ DNA-binding domain (3′BD) EMK97_RS13560 PF00271 Helicase conserved C-terminal domain EMK97_RS13565 PF01197 Ribosomal protein L31 EMK97_RS13575 PF04542 Sigma-70 region 2 EMK97_RS13575 PF04545 Sigma-70, region 4 EMK97_RS13590 PF00772 DnaB-like helicase N terminal domain EMK97_RS13590 PF03796 DnaB-like helicase C terminal domain EMK97_RS13595 PF01894 Uncharacterised protein family UPF0047 EMK97_RS13600 PF03466 LysR substrate binding domain EMK97_RS13600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS13605 PF01717 Cobalamin-independent synthase, Catalytic domain EMK97_RS13605 PF08267 Cobalamin-independent synthase, N-terminal domain EMK97_RS13610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EMK97_RS13615 PF00551 Formyl transferase EMK97_RS13620 PF09905 DNA-binding protein VF530 EMK97_RS13625 PF00462 Glutaredoxin EMK97_RS13625 PF08534 Redoxin EMK97_RS13635 PF01979 Amidohydrolase family EMK97_RS13645 PF12801 4Fe-4S binding domain EMK97_RS13645 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase EMK97_RS13645 PF13746 4Fe-4S dicluster domain EMK97_RS13650 PF01636 Phosphotransferase enzyme family EMK97_RS13655 PF01323 DSBA-like thioredoxin domain EMK97_RS13660 PF13180 PDZ domain EMK97_RS13665 PF13180 PDZ domain EMK97_RS13665 PF00595 PDZ domain EMK97_RS13675 PF03969 AFG1-like ATPase EMK97_RS13685 PF00085 Thioredoxin EMK97_RS13690 PF02673 Bacitracin resistance protein BacA EMK97_RS13695 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EMK97_RS13700 PF02152 Dihydroneopterin aldolase EMK97_RS13705 PF02660 Glycerol-3-phosphate acyltransferase EMK97_RS13710 PF00814 Glycoprotease family EMK97_RS13715 PF01165 Ribosomal protein S21 EMK97_RS13720 PF09424 Yqey-like protein EMK97_RS13725 PF01807 CHC2 zinc finger EMK97_RS13725 PF08275 DNA primase catalytic core, N-terminal domain EMK97_RS13725 PF08278 DNA primase DnaG DnaB-binding EMK97_RS13725 PF10410 DnaB-helicase binding domain of primase EMK97_RS13730 PF04539 Sigma-70 region 3 EMK97_RS13730 PF04545 Sigma-70, region 4 EMK97_RS13730 PF04542 Sigma-70 region 2 EMK97_RS13730 PF00140 Sigma-70 factor, region 1.2 EMK97_RS13730 PF03979 Sigma-70 factor, region 1.1 EMK97_RS13730 PF04546 Sigma-70, non-essential region EMK97_RS13795 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EMK97_RS13795 PF00326 Prolyl oligopeptidase family EMK97_RS13800 PF00034 Cytochrome c EMK97_RS13800 PF03150 Di-haem cytochrome c peroxidase EMK97_RS13815 PF01322 Cytochrome C' EMK97_RS13840 PF08139 Prokaryotic membrane lipoprotein lipid attachment site EMK97_RS13840 PF13036 Peptidoglycan-synthase activator LpoB EMK97_RS13870 PF00034 Cytochrome c EMK97_RS13875 PF00115 Cytochrome C and Quinol oxidase polypeptide I EMK97_RS13880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS13880 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS13880 PF00672 HAMP domain EMK97_RS13890 PF00679 Elongation factor G C-terminus EMK97_RS13890 PF00009 Elongation factor Tu GTP binding domain EMK97_RS13890 PF03144 Elongation factor Tu domain 2 EMK97_RS13900 PF03631 Virulence factor BrkB EMK97_RS13905 PF02580 D-Tyr-tRNA(Tyr) deacylase EMK97_RS13910 PF00238 Ribosomal protein L14p/L23e EMK97_RS13915 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EMK97_RS13915 PF00467 KOW motif EMK97_RS13920 PF00281 Ribosomal protein L5 EMK97_RS13920 PF00673 ribosomal L5P family C-terminus EMK97_RS13925 PF00253 Ribosomal protein S14p/S29e EMK97_RS13930 PF00410 Ribosomal protein S8 EMK97_RS13935 PF00347 Ribosomal protein L6 EMK97_RS13940 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EMK97_RS13945 PF00333 Ribosomal protein S5, N-terminal domain EMK97_RS13945 PF03719 Ribosomal protein S5, C-terminal domain EMK97_RS13950 PF00327 Ribosomal protein L30p/L7e EMK97_RS13955 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EMK97_RS13960 PF00344 SecY translocase EMK97_RS13965 PF00444 Ribosomal protein L36 EMK97_RS13970 PF00416 Ribosomal protein S13/S18 EMK97_RS13975 PF00411 Ribosomal protein S11 EMK97_RS13980 PF00163 Ribosomal protein S4/S9 N-terminal domain EMK97_RS13980 PF01479 S4 domain EMK97_RS13985 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EMK97_RS13985 PF01000 RNA polymerase Rpb3/RpoA insert domain EMK97_RS13985 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EMK97_RS13990 PF01196 Ribosomal protein L17 EMK97_RS13995 PF00485 Phosphoribulokinase / Uridine kinase family EMK97_RS14010 PF02566 OsmC-like protein EMK97_RS14020 PF00696 Amino acid kinase family EMK97_RS14025 PF02774 Semialdehyde dehydrogenase, dimerisation domain EMK97_RS14025 PF01118 Semialdehyde dehydrogenase, NAD binding domain EMK97_RS14030 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family EMK97_RS14035 PF00171 Aldehyde dehydrogenase family EMK97_RS14040 PF04958 Arginine N-succinyltransferase beta subunit EMK97_RS14045 PF00202 Aminotransferase class-III EMK97_RS14055 PF00117 Glutamine amidotransferase class-I EMK97_RS14065 PF17158 Membrane-associated sensor, integral membrane domain EMK97_RS14065 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS14070 PF00543 Nitrogen regulatory protein P-II EMK97_RS14075 PF00909 Ammonium Transporter Family EMK97_RS14080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EMK97_RS14085 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS14085 PF09308 LuxQ, periplasmic EMK97_RS14085 PF00072 Response regulator receiver domain EMK97_RS14095 PF04261 Dyp-type peroxidase family EMK97_RS14105 PF12806 Acetyl-CoA dehydrogenase C-terminal like EMK97_RS14105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS14105 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS14105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS14110 PF02381 MraZ protein, putative antitoxin-like EMK97_RS14115 PF01795 MraW methylase family EMK97_RS14120 PF04999 Cell division protein FtsL EMK97_RS14125 PF03717 Penicillin-binding Protein dimerisation domain EMK97_RS14125 PF00905 Penicillin binding protein transpeptidase domain EMK97_RS14130 PF01225 Mur ligase family, catalytic domain EMK97_RS14130 PF08245 Mur ligase middle domain EMK97_RS14130 PF02875 Mur ligase family, glutamate ligase domain EMK97_RS14135 PF02875 Mur ligase family, glutamate ligase domain EMK97_RS14135 PF08245 Mur ligase middle domain EMK97_RS14135 PF01225 Mur ligase family, catalytic domain EMK97_RS14140 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EMK97_RS14140 PF00953 Glycosyl transferase family 4 EMK97_RS14145 PF02875 Mur ligase family, glutamate ligase domain EMK97_RS14145 PF08245 Mur ligase middle domain EMK97_RS14150 PF01098 Cell cycle protein EMK97_RS14155 PF04101 Glycosyltransferase family 28 C-terminal domain EMK97_RS14155 PF03033 Glycosyltransferase family 28 N-terminal domain EMK97_RS14160 PF01225 Mur ligase family, catalytic domain EMK97_RS14160 PF02875 Mur ligase family, glutamate ligase domain EMK97_RS14160 PF08245 Mur ligase middle domain EMK97_RS14165 PF07478 D-ala D-ala ligase C-terminus EMK97_RS14165 PF01820 D-ala D-ala ligase N-terminus EMK97_RS14170 PF08478 POTRA domain, FtsQ-type EMK97_RS14170 PF03799 Cell division protein FtsQ EMK97_RS14175 PF02491 SHS2 domain inserted in FTSA EMK97_RS14180 PF00091 Tubulin/FtsZ family, GTPase domain EMK97_RS14180 PF12327 FtsZ family, C-terminal domain EMK97_RS14185 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase EMK97_RS14195 PF01551 Peptidase family M23 EMK97_RS14195 PF01476 LysM domain EMK97_RS14195 PF08525 Opacity-associated protein A N-terminal motif EMK97_RS14200 PF01043 SecA preprotein cross-linking domain EMK97_RS14200 PF02810 SEC-C motif EMK97_RS14200 PF07517 SecA DEAD-like domain EMK97_RS14200 PF07516 SecA Wing and Scaffold domain EMK97_RS14205 PF00293 NUDIX domain EMK97_RS14210 PF03884 DNA gyrase inhibitor YacG EMK97_RS14215 PF07072 Cell division protein EMK97_RS14220 PF01121 Dephospho-CoA kinase EMK97_RS14225 PF06750 Bacterial Peptidase A24 N-terminal domain EMK97_RS14225 PF01478 Type IV leader peptidase family EMK97_RS14230 PF00482 Type II secretion system (T2SS), protein F EMK97_RS14235 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain EMK97_RS14235 PF00437 Type II/IV secretion system protein EMK97_RS14240 PF00114 Pilin (bacterial filament) EMK97_RS14240 PF07963 Prokaryotic N-terminal methylation motif EMK97_RS14250 PF13847 Methyltransferase domain EMK97_RS14255 PF00572 Ribosomal protein L13 EMK97_RS14260 PF00380 Ribosomal protein S9/S16 EMK97_RS14265 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal EMK97_RS14265 PF00355 Rieske [2Fe-2S] domain EMK97_RS14270 PF00033 Cytochrome b/b6/petB EMK97_RS14270 PF00032 Cytochrome b(C-terminal)/b6/petD EMK97_RS14275 PF02167 Cytochrome C1 family EMK97_RS14280 PF02798 Glutathione S-transferase, N-terminal domain EMK97_RS14280 PF00043 Glutathione S-transferase, C-terminal domain EMK97_RS14285 PF04386 Stringent starvation protein B EMK97_RS14290 PF04972 BON domain EMK97_RS14295 PF13580 SIS domain EMK97_RS14300 PF02021 Uncharacterised protein family UPF0102 EMK97_RS14310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EMK97_RS14320 PF08335 GlnD PII-uridylyltransferase EMK97_RS14320 PF01842 ACT domain EMK97_RS14320 PF01966 HD domain EMK97_RS14320 PF01909 Nucleotidyltransferase domain EMK97_RS14330 PF01047 MarR family EMK97_RS14350 PF00691 OmpA family EMK97_RS14350 PF01389 OmpA-like transmembrane domain EMK97_RS14360 PF17392 Urocanase C-terminal domain EMK97_RS14360 PF17391 Urocanase N-terminal domain EMK97_RS14360 PF01175 Urocanase Rossmann-like domain EMK97_RS14365 PF00221 Aromatic amino acid lyase EMK97_RS14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS14370 PF03466 LysR substrate binding domain EMK97_RS14385 PF03600 Citrate transporter EMK97_RS14415 PF02492 CobW/HypB/UreG, nucleotide-binding domain EMK97_RS14415 PF07683 Cobalamin synthesis protein cobW C-terminal domain EMK97_RS14445 PF17862 AAA+ lid domain EMK97_RS14445 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS14445 PF01434 Peptidase family M41 EMK97_RS14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS14455 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS14455 PF09308 LuxQ, periplasmic EMK97_RS14455 PF00072 Response regulator receiver domain EMK97_RS14465 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS14475 PF12849 PBP superfamily domain EMK97_RS14490 PF00924 Mechanosensitive ion channel EMK97_RS14500 PF04055 Radical SAM superfamily EMK97_RS14505 PF09285 Elongation factor P, C-terminal EMK97_RS14505 PF08207 Elongation factor P (EF-P) KOW-like domain EMK97_RS14505 PF01132 Elongation factor P (EF-P) OB domain EMK97_RS14515 PF00356 Bacterial regulatory proteins, lacI family EMK97_RS14525 PF02685 Glucokinase EMK97_RS14530 PF16338 Domain of unknown function (DUF4968) EMK97_RS14530 PF17137 Domain of unknown function (DUF5110) EMK97_RS14530 PF13802 Galactose mutarotase-like EMK97_RS14530 PF01055 Glycosyl hydrolases family 31 EMK97_RS14535 PF00128 Alpha amylase, catalytic domain EMK97_RS14540 PF03714 Bacterial pullanase-associated domain EMK97_RS14540 PF02806 Alpha amylase, C-terminal all-beta domain EMK97_RS14540 PF00128 Alpha amylase, catalytic domain EMK97_RS14565 PF00248 Aldo/keto reductase family EMK97_RS14580 PF17967 Pullulanase N2 domain EMK97_RS14580 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EMK97_RS14580 PF03714 Bacterial pullanase-associated domain EMK97_RS14580 PF18494 Pullulanase Ins domain EMK97_RS14580 PF11852 Domain of unknown function (DUF3372) EMK97_RS14585 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EMK97_RS14585 PF11852 Domain of unknown function (DUF3372) EMK97_RS14585 PF03714 Bacterial pullanase-associated domain EMK97_RS14585 PF18494 Pullulanase Ins domain EMK97_RS14585 PF17967 Pullulanase N2 domain EMK97_RS14600 PF03793 PASTA domain EMK97_RS14600 PF00069 Protein kinase domain EMK97_RS14640 PF00005 ABC transporter EMK97_RS14640 PF02687 FtsX-like permease family EMK97_RS14640 PF12704 MacB-like periplasmic core domain EMK97_RS14655 PF04794 YdjC-like protein EMK97_RS14660 PF00144 Beta-lactamase EMK97_RS14660 PF07930 D-aminopeptidase, domain B EMK97_RS14665 PF00326 Prolyl oligopeptidase family EMK97_RS14665 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region EMK97_RS14670 PF00005 ABC transporter EMK97_RS14675 PF01061 ABC-2 type transporter EMK97_RS14680 PF02390 Putative methyltransferase EMK97_RS14720 PF09905 DNA-binding protein VF530 EMK97_RS14725 PF00563 EAL domain EMK97_RS14725 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS14725 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS14730 PF00072 Response regulator receiver domain EMK97_RS14740 PF01638 HxlR-like helix-turn-helix EMK97_RS14745 PF02525 Flavodoxin-like fold EMK97_RS14770 PF10137 Predicted nucleotide-binding protein containing TIR-like domain EMK97_RS14830 PF04052 TolB amino-terminal domain EMK97_RS14830 PF07676 WD40-like Beta Propeller Repeat EMK97_RS14840 PF13673 Acetyltransferase (GNAT) domain EMK97_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS14860 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS14860 PF00497 Bacterial extracellular solute-binding proteins, family 3 EMK97_RS14865 PF02954 Bacterial regulatory protein, Fis family EMK97_RS14865 PF00072 Response regulator receiver domain EMK97_RS14865 PF00158 Sigma-54 interaction domain EMK97_RS14875 PF12704 MacB-like periplasmic core domain EMK97_RS14875 PF02687 FtsX-like permease family EMK97_RS14875 PF00005 ABC transporter EMK97_RS14885 PF00245 Alkaline phosphatase EMK97_RS14890 PF00245 Alkaline phosphatase EMK97_RS14905 PF02659 Putative manganese efflux pump EMK97_RS14915 PF00563 EAL domain EMK97_RS14915 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS14915 PF00498 FHA domain EMK97_RS14930 PF00849 RNA pseudouridylate synthase EMK97_RS14930 PF01479 S4 domain EMK97_RS14940 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS14940 PF13188 PAS domain EMK97_RS14940 PF00563 EAL domain EMK97_RS14940 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS14945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain EMK97_RS14945 PF14850 DNA-binding domain of Proline dehydrogenase EMK97_RS14945 PF01619 Proline dehydrogenase EMK97_RS14945 PF00171 Aldehyde dehydrogenase family EMK97_RS14950 PF01037 Lrp/AsnC ligand binding domain EMK97_RS14960 PF00209 Sodium:neurotransmitter symporter family EMK97_RS14965 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS14965 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS14965 PF00563 EAL domain EMK97_RS14970 PF01170 Putative RNA methylase family UPF0020 EMK97_RS14970 PF10672 S-adenosylmethionine-dependent methyltransferase EMK97_RS14970 PF02926 THUMP domain EMK97_RS14975 PF01068 ATP dependent DNA ligase domain EMK97_RS14975 PF14743 DNA ligase OB-like domain EMK97_RS14990 PF01541 GIY-YIG catalytic domain EMK97_RS14995 PF00472 RF-1 domain EMK97_RS15015 PF00313 'Cold-shock' DNA-binding domain EMK97_RS15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS15020 PF00672 HAMP domain EMK97_RS15025 PF00149 Calcineurin-like phosphoesterase EMK97_RS15030 PF00398 Ribosomal RNA adenine dimethylase EMK97_RS15035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA EMK97_RS15040 PF00639 PPIC-type PPIASE domain EMK97_RS15040 PF09312 SurA N-terminal domain EMK97_RS15045 PF04453 LPS transport system D EMK97_RS15045 PF03968 OstA-like protein EMK97_RS15050 PF05099 Tellurite resistance protein TerB EMK97_RS15050 PF00226 DnaJ domain EMK97_RS15055 PF11871 Domain of unknown function (DUF3391) EMK97_RS15055 PF01966 HD domain EMK97_RS15065 PF00849 RNA pseudouridylate synthase EMK97_RS15070 PF00271 Helicase conserved C-terminal domain EMK97_RS15070 PF18337 RapA N-terminal Tudor like domain EMK97_RS15070 PF18339 RapA N-terminal Tudor like domain 1 EMK97_RS15070 PF12137 RNA polymerase recycling family C-terminal EMK97_RS15070 PF00176 SNF2 family N-terminal domain EMK97_RS15075 PF02562 PhoH-like protein EMK97_RS15075 PF13638 PIN domain EMK97_RS15085 PF13340 Putative transposase of IS4/5 family (DUF4096) EMK97_RS15100 PF00144 Beta-lactamase EMK97_RS15105 PF00881 Nitroreductase family EMK97_RS15110 PF00873 AcrB/AcrD/AcrF family EMK97_RS15130 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS15130 PF01627 Hpt domain EMK97_RS15130 PF00072 Response regulator receiver domain EMK97_RS15130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EMK97_RS15130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS15130 PF00672 HAMP domain EMK97_RS15135 PF01316 Arginine repressor, DNA binding domain EMK97_RS15135 PF02863 Arginine repressor, C-terminal domain EMK97_RS15140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EMK97_RS15140 PF00056 lactate/malate dehydrogenase, NAD binding domain EMK97_RS15150 PF00348 Polyprenyl synthetase EMK97_RS15155 PF00829 Ribosomal prokaryotic L21 protein EMK97_RS15160 PF01016 Ribosomal L27 protein EMK97_RS15165 PF01926 50S ribosome-binding GTPase EMK97_RS15165 PF01018 GTP1/OBG EMK97_RS15170 PF00186 Dihydrofolate reductase EMK97_RS15175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster EMK97_RS15175 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS15180 PF01645 Conserved region in glutamate synthase EMK97_RS15180 PF00310 Glutamine amidotransferases class-II EMK97_RS15180 PF01493 GXGXG motif EMK97_RS15180 PF04898 Glutamate synthase central domain EMK97_RS15185 PF02649 Type I GTP cyclohydrolase folE2 EMK97_RS15195 PF00072 Response regulator receiver domain EMK97_RS15195 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS15200 PF00497 Bacterial extracellular solute-binding proteins, family 3 EMK97_RS15200 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS15205 PF08468 Methyltransferase small domain N-terminal EMK97_RS15205 PF05175 Methyltransferase small domain EMK97_RS15210 PF00701 Dihydrodipicolinate synthetase family EMK97_RS15215 PF14602 Hexapeptide repeat of succinyl-transferase EMK97_RS15215 PF00132 Bacterial transferase hexapeptide (six repeats) EMK97_RS15215 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal EMK97_RS15220 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EMK97_RS15220 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EMK97_RS15230 PF13006 Insertion element 4 transposase N-terminal EMK97_RS15230 PF01609 Transposase DDE domain EMK97_RS15245 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS15245 PF00593 TonB dependent receptor EMK97_RS15255 PF13509 S1 domain EMK97_RS15255 PF17783 CvfB-like winged helix domain EMK97_RS15270 PF00873 AcrB/AcrD/AcrF family EMK97_RS15285 PF04403 Paraquat-inducible protein A EMK97_RS15290 PF12833 Helix-turn-helix domain EMK97_RS15325 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS15325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EMK97_RS15330 PF00005 ABC transporter EMK97_RS15345 PF00109 Beta-ketoacyl synthase, N-terminal domain EMK97_RS15345 PF02801 Beta-ketoacyl synthase, C-terminal domain EMK97_RS15350 PF00196 Bacterial regulatory proteins, luxR family EMK97_RS15355 PF00890 FAD binding domain EMK97_RS15360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EMK97_RS15360 PF00205 Thiamine pyrophosphate enzyme, central domain EMK97_RS15360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EMK97_RS15365 PF03475 3-alpha domain EMK97_RS15365 PF03473 MOSC domain EMK97_RS15370 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS15370 PF07694 5TMR of 5TMR-LYT EMK97_RS15400 PF00939 Sodium:sulfate symporter transmembrane region EMK97_RS15405 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS15405 PF17151 Periplasmic sensor domain EMK97_RS15425 PF00550 Phosphopantetheine attachment site EMK97_RS15430 PF00550 Phosphopantetheine attachment site EMK97_RS15440 PF13193 AMP-binding enzyme C-terminal domain EMK97_RS15440 PF00501 AMP-binding enzyme EMK97_RS15445 PF07977 FabA-like domain EMK97_RS15450 PF00535 Glycosyl transferase family 2 EMK97_RS15460 PF00221 Aromatic amino acid lyase EMK97_RS15485 PF00109 Beta-ketoacyl synthase, N-terminal domain EMK97_RS15485 PF02801 Beta-ketoacyl synthase, C-terminal domain EMK97_RS15510 PF00109 Beta-ketoacyl synthase, N-terminal domain EMK97_RS15510 PF02801 Beta-ketoacyl synthase, C-terminal domain EMK97_RS15515 PF06629 MltA-interacting protein MipA EMK97_RS15525 PF07670 Nucleoside recognition EMK97_RS15525 PF02421 Ferrous iron transport protein B EMK97_RS15525 PF07664 Ferrous iron transport protein B C terminus EMK97_RS15530 PF00365 Phosphofructokinase EMK97_RS15535 PF01636 Phosphotransferase enzyme family EMK97_RS15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS15540 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS15540 PF00672 HAMP domain EMK97_RS15545 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS15545 PF00072 Response regulator receiver domain EMK97_RS15565 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS15565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS15565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS15575 PF01209 ubiE/COQ5 methyltransferase family EMK97_RS15600 PF10459 Peptidase S46 EMK97_RS15605 PF02863 Arginine repressor, C-terminal domain EMK97_RS15605 PF01316 Arginine repressor, DNA binding domain EMK97_RS15620 PF00005 ABC transporter EMK97_RS15620 PF03412 Peptidase C39 family EMK97_RS15620 PF00664 ABC transporter transmembrane region EMK97_RS15625 PF00529 HlyD membrane-fusion protein of T1SS EMK97_RS15625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS15630 PF02321 Outer membrane efflux protein EMK97_RS15635 PF00691 OmpA family EMK97_RS15645 PF00563 EAL domain EMK97_RS15645 PF08448 PAS fold EMK97_RS15645 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS15665 PF01557 Fumarylacetoacetate (FAA) hydrolase family EMK97_RS15670 PF06062 Uncharacterised protein family (UPF0231) EMK97_RS15680 PF07690 Major Facilitator Superfamily EMK97_RS15690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EMK97_RS15700 PF05175 Methyltransferase small domain EMK97_RS15705 PF01722 BolA-like protein EMK97_RS15710 PF07055 Enoyl reductase FAD binding domain EMK97_RS15710 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase EMK97_RS15710 PF12241 Trans-2-enoyl-CoA reductase catalytic region EMK97_RS15720 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) EMK97_RS15720 PF11973 NQRA C-terminal domain EMK97_RS15725 PF03116 NQR2, RnfD, RnfE family EMK97_RS15730 PF04205 FMN-binding domain EMK97_RS15735 PF02508 Rnf-Nqr subunit, membrane protein EMK97_RS15740 PF02508 Rnf-Nqr subunit, membrane protein EMK97_RS15745 PF00970 Oxidoreductase FAD-binding domain EMK97_RS15745 PF00175 Oxidoreductase NAD-binding domain EMK97_RS15745 PF00111 2Fe-2S iron-sulfur cluster binding domain EMK97_RS15750 PF02424 ApbE family EMK97_RS15760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase EMK97_RS15760 PF02780 Transketolase, C-terminal domain EMK97_RS15760 PF02779 Transketolase, pyrimidine binding domain EMK97_RS15765 PF00348 Polyprenyl synthetase EMK97_RS15770 PF02609 Exonuclease VII small subunit EMK97_RS15775 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS15780 PF13677 Membrane MotB of proton-channel complex MotA/MotB EMK97_RS15780 PF00691 OmpA family EMK97_RS15785 PF02926 THUMP domain EMK97_RS15785 PF02568 Thiamine biosynthesis protein (ThiI) EMK97_RS15790 PF08546 Ketopantoate reductase PanE/ApbA C terminal EMK97_RS15790 PF02558 Ketopantoate reductase PanE/ApbA EMK97_RS15800 PF04461 Protein of unknown function (DUF520) EMK97_RS15805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS15815 PF03937 Flavinator of succinate dehydrogenase EMK97_RS15825 PF02910 Fumarate reductase flavoprotein C-term EMK97_RS15825 PF00890 FAD binding domain EMK97_RS15830 PF04542 Sigma-70 region 2 EMK97_RS15830 PF08281 Sigma-70, region 4 EMK97_RS15840 PF03888 MucB/RseB N-terminal domain EMK97_RS15840 PF17188 MucB/RseB C-terminal domain EMK97_RS15850 PF00679 Elongation factor G C-terminus EMK97_RS15850 PF03144 Elongation factor Tu domain 2 EMK97_RS15850 PF06421 GTP-binding protein LepA C-terminus EMK97_RS15850 PF00009 Elongation factor Tu GTP binding domain EMK97_RS15855 PF10502 Signal peptidase, peptidase S26 EMK97_RS15860 PF00035 Double-stranded RNA binding motif EMK97_RS15860 PF14622 Ribonuclease-III-like EMK97_RS15865 PF01926 50S ribosome-binding GTPase EMK97_RS15865 PF07650 KH domain EMK97_RS15870 PF11967 Recombination protein O N terminal EMK97_RS15870 PF02565 Recombination protein O C terminal EMK97_RS15875 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ EMK97_RS15880 PF01648 4'-phosphopantetheinyl transferase superfamily EMK97_RS15890 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS15890 PF00072 Response regulator receiver domain EMK97_RS15890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EMK97_RS15890 PF01627 Hpt domain EMK97_RS15890 PF00672 HAMP domain EMK97_RS15895 PF05958 tRNA (Uracil-5-)-methyltransferase EMK97_RS15895 PF01938 TRAM domain EMK97_RS15900 PF04607 Region found in RelA / SpoT proteins EMK97_RS15900 PF13291 ACT domain EMK97_RS15900 PF02824 TGS domain EMK97_RS15905 PF03819 MazG nucleotide pyrophosphohydrolase domain EMK97_RS15915 PF04304 Protein of unknown function (DUF454) EMK97_RS15925 PF06418 CTP synthase N-terminus EMK97_RS15925 PF00117 Glutamine amidotransferase class-I EMK97_RS15930 PF00113 Enolase, C-terminal TIM barrel domain EMK97_RS15930 PF03952 Enolase, N-terminal domain EMK97_RS15945 PF00923 Transaldolase/Fructose-6-phosphate aldolase EMK97_RS15950 PF03883 Peroxide stress protein YaaA EMK97_RS15975 PF00271 Helicase conserved C-terminal domain EMK97_RS15975 PF00270 DEAD/DEAH box helicase EMK97_RS15980 PF00258 Flavodoxin EMK97_RS15985 PF10411 Disulfide bond isomerase protein N-terminus EMK97_RS15985 PF13098 Thioredoxin-like domain EMK97_RS15990 PF17768 RecJ OB domain EMK97_RS15990 PF02272 DHHA1 domain EMK97_RS15990 PF01368 DHH family EMK97_RS16000 PF01336 OB-fold nucleic acid binding domain EMK97_RS16000 PF00152 tRNA synthetases class II (D, K and N) EMK97_RS16005 PF00209 Sodium:neurotransmitter symporter family EMK97_RS16010 PF00849 RNA pseudouridylate synthase EMK97_RS16015 PF00675 Insulinase (Peptidase family M16) EMK97_RS16015 PF05193 Peptidase M16 inactive domain EMK97_RS16020 PF04262 Glutamate-cysteine ligase EMK97_RS16040 PF03471 Transporter associated domain EMK97_RS16040 PF00571 CBS domain EMK97_RS16040 PF01595 Cyclin M transmembrane N-terminal domain EMK97_RS16045 PF01578 Cytochrome C assembly protein EMK97_RS16050 PF02978 Signal peptide binding domain EMK97_RS16050 PF02881 SRP54-type protein, helical bundle domain EMK97_RS16050 PF00448 SRP54-type protein, GTPase domain EMK97_RS16075 PF00886 Ribosomal protein S16 EMK97_RS16080 PF05239 PRC-barrel domain EMK97_RS16080 PF01782 RimM N-terminal domain EMK97_RS16085 PF01746 tRNA (Guanine-1)-methyltransferase EMK97_RS16090 PF01245 Ribosomal protein L19 EMK97_RS16130 PF02541 Ppx/GppA phosphatase family EMK97_RS16135 PF17941 Polyphosphate kinase C-terminal domain 1 EMK97_RS16135 PF02503 Polyphosphate kinase middle domain EMK97_RS16135 PF13090 Polyphosphate kinase C-terminal domain 2 EMK97_RS16135 PF13089 Polyphosphate kinase N-terminal domain EMK97_RS16145 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS16150 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS16155 PF02472 Biopolymer transport protein ExbD/TolR EMK97_RS16160 PF03544 Gram-negative bacterial TonB protein C-terminal EMK97_RS16250 PF00501 AMP-binding enzyme EMK97_RS16250 PF16177 Acetyl-coenzyme A synthetase N-terminus EMK97_RS16250 PF13193 AMP-binding enzyme C-terminal domain EMK97_RS16255 PF13006 Insertion element 4 transposase N-terminal EMK97_RS16255 PF01609 Transposase DDE domain EMK97_RS16265 PF00793 DAHP synthetase I family EMK97_RS16270 PF02153 Prephenate dehydrogenase EMK97_RS16270 PF01817 Chorismate mutase type II EMK97_RS16280 PF05649 Peptidase family M13 EMK97_RS16280 PF01431 Peptidase family M13 EMK97_RS16290 PF00155 Aminotransferase class I and II EMK97_RS16290 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS16295 PF00675 Insulinase (Peptidase family M16) EMK97_RS16295 PF05193 Peptidase M16 inactive domain EMK97_RS16295 PF16187 Middle or third domain of peptidase_M16 EMK97_RS16300 PF18267 Rubredoxin NAD+ reductase C-terminal domain EMK97_RS16300 PF13806 Rieske-like [2Fe-2S] domain EMK97_RS16300 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS16300 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain EMK97_RS16300 PF01077 Nitrite and sulphite reductase 4Fe-4S domain EMK97_RS16300 PF04324 BFD-like [2Fe-2S] binding domain EMK97_RS16305 PF13806 Rieske-like [2Fe-2S] domain EMK97_RS16310 PF07690 Major Facilitator Superfamily EMK97_RS16315 PF03793 PASTA domain EMK97_RS16315 PF00069 Protein kinase domain EMK97_RS16320 PF04324 BFD-like [2Fe-2S] binding domain EMK97_RS16320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain EMK97_RS16320 PF01568 Molydopterin dinucleotide binding domain EMK97_RS16320 PF00384 Molybdopterin oxidoreductase EMK97_RS16350 PF07733 Bacterial DNA polymerase III alpha NTPase domain EMK97_RS16350 PF00929 Exonuclease EMK97_RS16350 PF02811 PHP domain EMK97_RS16350 PF11490 DNA polymerase III polC-type N-terminus II EMK97_RS16350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EMK97_RS16350 PF14579 Helix-hairpin-helix motif EMK97_RS16360 PF01292 Prokaryotic cytochrome b561 EMK97_RS16365 PF00672 HAMP domain EMK97_RS16365 PF12729 Four helix bundle sensory module for signal transduction EMK97_RS16365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS16395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion EMK97_RS16400 PF00873 AcrB/AcrD/AcrF family EMK97_RS16405 PF06629 MltA-interacting protein MipA EMK97_RS16415 PF00800 Prephenate dehydratase EMK97_RS16415 PF01817 Chorismate mutase type II EMK97_RS16425 PF01804 Penicillin amidase EMK97_RS16435 PF01274 Malate synthase EMK97_RS16440 PF04172 LrgB-like family EMK97_RS16445 PF03788 LrgA family EMK97_RS16450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS16450 PF03466 LysR substrate binding domain EMK97_RS16455 PF00463 Isocitrate lyase family EMK97_RS16460 PF00563 EAL domain EMK97_RS16460 PF08448 PAS fold EMK97_RS16460 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS16465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EMK97_RS16465 PF00205 Thiamine pyrophosphate enzyme, central domain EMK97_RS16465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EMK97_RS16480 PF00593 TonB dependent receptor EMK97_RS16480 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS16485 PF00672 HAMP domain EMK97_RS16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS16485 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS16485 PF01627 Hpt domain EMK97_RS16485 PF00072 Response regulator receiver domain EMK97_RS16485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EMK97_RS16505 PF00873 AcrB/AcrD/AcrF family EMK97_RS16510 PF01022 Bacterial regulatory protein, arsR family EMK97_RS16530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EMK97_RS16530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EMK97_RS16550 PF03652 Holliday junction resolvase EMK97_RS16555 PF02622 Uncharacterized ACR, COG1678 EMK97_RS16560 PF02951 Prokaryotic glutathione synthetase, N-terminal domain EMK97_RS16560 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain EMK97_RS16565 PF04452 RNA methyltransferase EMK97_RS16570 PF02772 S-adenosylmethionine synthetase, central domain EMK97_RS16570 PF02773 S-adenosylmethionine synthetase, C-terminal domain EMK97_RS16570 PF00438 S-adenosylmethionine synthetase, N-terminal domain EMK97_RS16575 PF01177 Asp/Glu/Hydantoin racemase EMK97_RS16595 PF05164 Cell division protein ZapA EMK97_RS16600 PF03695 Uncharacterised protein family (UPF0149) EMK97_RS16605 PF00557 Metallopeptidase family M24 EMK97_RS16605 PF05195 Aminopeptidase P, N-terminal domain EMK97_RS16610 PF01494 FAD binding domain EMK97_RS16615 PF01494 FAD binding domain EMK97_RS16620 PF08669 Glycine cleavage T-protein C-terminal barrel domain EMK97_RS16620 PF01571 Aminomethyltransferase folate-binding domain EMK97_RS16625 PF01597 Glycine cleavage H-protein EMK97_RS16630 PF02347 Glycine cleavage system P-protein EMK97_RS16635 PF13185 GAF domain EMK97_RS16635 PF00158 Sigma-54 interaction domain EMK97_RS16635 PF02954 Bacterial regulatory protein, Fis family EMK97_RS16675 PF07728 AAA domain (dynein-related subfamily) EMK97_RS16675 PF12102 Domain of unknown function (DUF3578) EMK97_RS16730 PF13538 UvrD-like helicase C-terminal domain EMK97_RS16730 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EMK97_RS16730 PF14490 Helix-hairpin-helix containing domain EMK97_RS16750 PF01979 Amidohydrolase family EMK97_RS16780 PF08447 PAS fold EMK97_RS16780 PF13426 PAS domain EMK97_RS16780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS16790 PF09313 Domain of unknown function (DUF1971) EMK97_RS16790 PF03848 Tellurite resistance protein TehB EMK97_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS16795 PF03466 LysR substrate binding domain EMK97_RS16800 PF01925 Sulfite exporter TauE/SafE EMK97_RS16805 PF08267 Cobalamin-independent synthase, N-terminal domain EMK97_RS16805 PF01717 Cobalamin-independent synthase, Catalytic domain EMK97_RS16830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EMK97_RS16835 PF00005 ABC transporter EMK97_RS16840 PF02600 Disulfide bond formation protein DsbB EMK97_RS16845 PF13462 Thioredoxin EMK97_RS16850 PF14437 MafB19-like deaminase EMK97_RS16865 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS16865 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS16865 PF00563 EAL domain EMK97_RS16875 PF02152 Dihydroneopterin aldolase EMK97_RS16880 PF01227 GTP cyclohydrolase I EMK97_RS16890 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS16895 PF08274 PhnA Zinc-Ribbon EMK97_RS16895 PF03831 PhnA domain EMK97_RS16900 PF13545 Crp-like helix-turn-helix domain EMK97_RS16900 PF00027 Cyclic nucleotide-binding domain EMK97_RS16930 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS16930 PF00593 TonB dependent receptor EMK97_RS16935 PF06167 Glucose-regulated metallo-peptidase M90 EMK97_RS16955 PF02469 Fasciclin domain EMK97_RS16965 PF04542 Sigma-70 region 2 EMK97_RS16965 PF04545 Sigma-70, region 4 EMK97_RS16970 PF12973 ChrR Cupin-like domain EMK97_RS16980 PF03441 FAD binding domain of DNA photolyase EMK97_RS16980 PF00875 DNA photolyase EMK97_RS16990 PF00106 short chain dehydrogenase EMK97_RS16995 PF01593 Flavin containing amine oxidoreductase EMK97_RS17010 PF02678 Pirin EMK97_RS17010 PF17954 Quercetinase C-terminal cupin domain EMK97_RS17015 PF13409 Glutathione S-transferase, N-terminal domain EMK97_RS17020 PF07681 DoxX EMK97_RS17025 PF03466 LysR substrate binding domain EMK97_RS17025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS17030 PF00925 GTP cyclohydrolase II EMK97_RS17040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS17040 PF00072 Response regulator receiver domain EMK97_RS17040 PF00672 HAMP domain EMK97_RS17040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EMK97_RS17040 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS17040 PF01627 Hpt domain EMK97_RS17045 PF06719 AraC-type transcriptional regulator N-terminus EMK97_RS17045 PF12833 Helix-turn-helix domain EMK97_RS17050 PF00465 Iron-containing alcohol dehydrogenase EMK97_RS17055 PF01022 Bacterial regulatory protein, arsR family EMK97_RS17060 PF01758 Sodium Bile acid symporter family EMK97_RS17065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EMK97_RS17065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EMK97_RS17095 PF07995 Glucose / Sorbosone dehydrogenase EMK97_RS17105 PF18381 YcaO cyclodehydratase C-terminal domain EMK97_RS17105 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding EMK97_RS17150 PF00924 Mechanosensitive ion channel EMK97_RS17150 PF05552 Conserved TM helix EMK97_RS17160 PF00072 Response regulator receiver domain EMK97_RS17160 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS17175 PF00072 Response regulator receiver domain EMK97_RS17175 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS17180 PF00672 HAMP domain EMK97_RS17180 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS17200 PF01431 Peptidase family M13 EMK97_RS17200 PF05649 Peptidase family M13 EMK97_RS17210 PF00593 TonB dependent receptor EMK97_RS17210 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS17255 PF00149 Calcineurin-like phosphoesterase EMK97_RS17255 PF02872 5'-nucleotidase, C-terminal domain EMK97_RS17280 PF00005 ABC transporter EMK97_RS17285 PF07702 UTRA domain EMK97_RS17285 PF00392 Bacterial regulatory proteins, gntR family EMK97_RS17300 PF05922 Peptidase inhibitor I9 EMK97_RS17300 PF00082 Subtilase family EMK97_RS17305 PF01244 Membrane dipeptidase (Peptidase family M19) EMK97_RS17310 PF00248 Aldo/keto reductase family EMK97_RS17325 PF17200 Single Cache domain 2 EMK97_RS17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain EMK97_RS17325 PF00672 HAMP domain EMK97_RS17335 PF01132 Elongation factor P (EF-P) OB domain EMK97_RS17335 PF08207 Elongation factor P (EF-P) KOW-like domain EMK97_RS17335 PF09285 Elongation factor P, C-terminal EMK97_RS17345 PF01609 Transposase DDE domain EMK97_RS17345 PF13006 Insertion element 4 transposase N-terminal EMK97_RS17365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS17365 PF03466 LysR substrate binding domain EMK97_RS17375 PF13411 MerR HTH family regulatory protein EMK97_RS17380 PF03773 Predicted permease EMK97_RS17395 PF01668 SmpB protein EMK97_RS17400 PF03364 Polyketide cyclase / dehydrase and lipid transport EMK97_RS17405 PF03658 RnfH family Ubiquitin EMK97_RS17415 PF04355 SmpA / OmlA family EMK97_RS17420 PF02463 RecF/RecN/SMC N terminal domain EMK97_RS17425 PF01513 ATP-NAD kinase EMK97_RS17430 PF01025 GrpE EMK97_RS17440 PF00012 Hsp70 protein EMK97_RS17445 PF00684 DnaJ central domain EMK97_RS17445 PF01556 DnaJ C terminal domain EMK97_RS17445 PF00226 DnaJ domain EMK97_RS17450 PF01037 Lrp/AsnC ligand binding domain EMK97_RS17455 PF00361 Proton-conducting membrane transporter EMK97_RS17455 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter EMK97_RS17455 PF13244 Domain of unknown function (DUF4040) EMK97_RS17455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus EMK97_RS17460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L EMK97_RS17465 PF00361 Proton-conducting membrane transporter EMK97_RS17470 PF01899 Na+/H+ ion antiporter subunit EMK97_RS17475 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) EMK97_RS17485 PF03334 Na+/H+ antiporter subunit EMK97_RS17490 PF04315 Elongation factor P hydroxylase EMK97_RS17500 PF08891 YfcL protein EMK97_RS17510 PF13407 Periplasmic binding protein domain EMK97_RS17520 PF01266 FAD dependent oxidoreductase EMK97_RS17520 PF05430 S-adenosyl-L-methionine-dependent methyltransferase EMK97_RS17525 PF02801 Beta-ketoacyl synthase, C-terminal domain EMK97_RS17525 PF00109 Beta-ketoacyl synthase, N-terminal domain EMK97_RS17530 PF13006 Insertion element 4 transposase N-terminal EMK97_RS17530 PF01609 Transposase DDE domain EMK97_RS17535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EMK97_RS17535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EMK97_RS17535 PF11890 Domain of unknown function (DUF3410) EMK97_RS17540 PF02774 Semialdehyde dehydrogenase, dimerisation domain EMK97_RS17540 PF01118 Semialdehyde dehydrogenase, NAD binding domain EMK97_RS17550 PF01416 tRNA pseudouridine synthase EMK97_RS17555 PF17848 Acetyl-coA carboxylase zinc finger domain EMK97_RS17555 PF01039 Carboxyl transferase domain EMK97_RS17560 PF02875 Mur ligase family, glutamate ligase domain EMK97_RS17560 PF08245 Mur ligase middle domain EMK97_RS17570 PF02674 Colicin V production protein EMK97_RS17575 PF00156 Phosphoribosyl transferase domain EMK97_RS17590 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) EMK97_RS17595 PF12850 Calcineurin-like phosphoesterase superfamily domain EMK97_RS17600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EMK97_RS17605 PF01406 tRNA synthetases class I (C) catalytic domain EMK97_RS17605 PF09190 DALR domain EMK97_RS17610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EMK97_RS17610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EMK97_RS17635 PF05697 Bacterial trigger factor protein (TF) EMK97_RS17635 PF05698 Bacterial trigger factor protein (TF) C-terminus EMK97_RS17635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EMK97_RS17640 PF00574 Clp protease EMK97_RS17645 PF10431 C-terminal, D2-small domain, of ClpB protein EMK97_RS17645 PF06689 ClpX C4-type zinc finger EMK97_RS17645 PF07724 AAA domain (Cdc48 subfamily) EMK97_RS17650 PF02190 ATP-dependent protease La (LON) substrate-binding domain EMK97_RS17650 PF00004 ATPase family associated with various cellular activities (AAA) EMK97_RS17650 PF05362 Lon protease (S16) C-terminal proteolytic domain EMK97_RS17655 PF00216 Bacterial DNA-binding protein EMK97_RS17660 PF13145 PPIC-type PPIASE domain EMK97_RS17665 PF13006 Insertion element 4 transposase N-terminal EMK97_RS17665 PF01609 Transposase DDE domain EMK97_RS17670 PF00005 ABC transporter EMK97_RS17675 PF00005 ABC transporter EMK97_RS17675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EMK97_RS17680 PF12911 N-terminal TM domain of oligopeptide transport permease C EMK97_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component EMK97_RS17685 PF00528 Binding-protein-dependent transport system inner membrane component EMK97_RS17690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EMK97_RS17695 PF00158 Sigma-54 interaction domain EMK97_RS17695 PF02954 Bacterial regulatory protein, Fis family EMK97_RS17700 PF04012 PspA/IM30 family EMK97_RS17715 PF04317 YcjX-like family, DUF463 EMK97_RS17720 PF05128 Domain of unknown function (DUF697) EMK97_RS17725 PF00351 Biopterin-dependent aromatic amino acid hydroxylase EMK97_RS17730 PF01329 Pterin 4 alpha carbinolamine dehydratase EMK97_RS17735 PF18024 Helix-turn-helix domain EMK97_RS17735 PF00158 Sigma-54 interaction domain EMK97_RS17745 PF02798 Glutathione S-transferase, N-terminal domain EMK97_RS17745 PF14497 Glutathione S-transferase, C-terminal domain EMK97_RS17770 PF00593 TonB dependent receptor EMK97_RS17770 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS17775 PF13181 Tetratricopeptide repeat EMK97_RS17785 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS17790 PF01618 MotA/TolQ/ExbB proton channel family EMK97_RS17795 PF02472 Biopolymer transport protein ExbD/TolR EMK97_RS17830 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS17830 PF00072 Response regulator receiver domain EMK97_RS17835 PF12169 DNA polymerase III subunits gamma and tau domain III EMK97_RS17835 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding EMK97_RS17835 PF12170 DNA polymerase III tau subunit V interacting with alpha EMK97_RS17840 PF02575 YbaB/EbfC DNA-binding family EMK97_RS17845 PF02132 RecR protein EMK97_RS17845 PF13662 Toprim domain EMK97_RS17850 PF01253 Translation initiation factor SUI1 EMK97_RS17855 PF01012 Electron transfer flavoprotein domain EMK97_RS17855 PF00766 Electron transfer flavoprotein FAD-binding domain EMK97_RS17860 PF01012 Electron transfer flavoprotein domain EMK97_RS17885 PF00994 Probable molybdopterin binding domain EMK97_RS17885 PF02464 Competence-damaged protein EMK97_RS17900 PF00701 Dihydrodipicolinate synthetase family EMK97_RS17905 PF00849 RNA pseudouridylate synthase EMK97_RS17905 PF01479 S4 domain EMK97_RS17925 PF02769 AIR synthase related protein, C-terminal domain EMK97_RS17925 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal EMK97_RS17925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EMK97_RS17930 PF00497 Bacterial extracellular solute-binding proteins, family 3 EMK97_RS17930 PF01464 Transglycosylase SLT domain EMK97_RS17935 PF00672 HAMP domain EMK97_RS17935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS17935 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS17935 PF01627 Hpt domain EMK97_RS17935 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) EMK97_RS17935 PF00072 Response regulator receiver domain EMK97_RS17940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EMK97_RS17945 PF06969 HemN C-terminal domain EMK97_RS17945 PF04055 Radical SAM superfamily EMK97_RS17950 PF01725 Ham1 family EMK97_RS17960 PF02325 YGGT family EMK97_RS17965 PF14748 Pyrroline-5-carboxylate reductase dimerisation EMK97_RS17965 PF03807 NADP oxidoreductase coenzyme F420-dependent EMK97_RS17970 PF01168 Alanine racemase, N-terminal domain EMK97_RS17975 PF00437 Type II/IV secretion system protein EMK97_RS17980 PF00437 Type II/IV secretion system protein EMK97_RS17985 PF00571 CBS domain EMK97_RS17985 PF00478 IMP dehydrogenase / GMP reductase domain EMK97_RS17990 PF00171 Aldehyde dehydrogenase family EMK97_RS17995 PF00528 Binding-protein-dependent transport system inner membrane component EMK97_RS18000 PF00528 Binding-protein-dependent transport system inner membrane component EMK97_RS18005 PF00005 ABC transporter EMK97_RS18010 PF01895 PhoU domain EMK97_RS18015 PF01865 Protein of unknown function DUF47 EMK97_RS18020 PF01384 Phosphate transporter family EMK97_RS18030 PF03466 LysR substrate binding domain EMK97_RS18030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS18035 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) EMK97_RS18045 PF00174 Oxidoreductase molybdopterin binding domain EMK97_RS18050 PF01794 Ferric reductase like transmembrane component EMK97_RS18055 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS18060 PF01979 Amidohydrolase family EMK97_RS18070 PF01734 Patatin-like phospholipase EMK97_RS18075 PF01263 Aldose 1-epimerase EMK97_RS18080 PF02976 DNA mismatch repair enzyme MutH EMK97_RS18085 PF00293 NUDIX domain EMK97_RS18090 PF01590 GAF domain EMK97_RS18090 PF02896 PEP-utilising enzyme, TIM barrel domain EMK97_RS18090 PF05524 PEP-utilising enzyme, N-terminal EMK97_RS18090 PF00391 PEP-utilising enzyme, mobile domain EMK97_RS18095 PF01925 Sulfite exporter TauE/SafE EMK97_RS18100 PF01790 Prolipoprotein diacylglyceryl transferase EMK97_RS18105 PF00303 Thymidylate synthase EMK97_RS18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS18120 PF03466 LysR substrate binding domain EMK97_RS18130 PF00753 Metallo-beta-lactamase superfamily EMK97_RS18130 PF14863 Alkyl sulfatase dimerisation EMK97_RS18130 PF14864 Alkyl sulfatase C-terminal EMK97_RS18135 PF13192 Thioredoxin domain EMK97_RS18135 PF07992 Pyridine nucleotide-disulphide oxidoreductase EMK97_RS18140 PF10417 C-terminal domain of 1-Cys peroxiredoxin EMK97_RS18140 PF00578 AhpC/TSA family EMK97_RS18155 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS18155 PF00593 TonB dependent receptor EMK97_RS18170 PF02514 CobN/Magnesium Chelatase EMK97_RS18170 PF11965 Domain of unknown function (DUF3479) EMK97_RS18180 PF00593 TonB dependent receptor EMK97_RS18180 PF07715 TonB-dependent Receptor Plug Domain EMK97_RS18180 PF07660 Secretin and TonB N terminus short domain EMK97_RS18185 PF03315 Serine dehydratase beta chain EMK97_RS18185 PF03313 Serine dehydratase alpha chain EMK97_RS18190 PF00293 NUDIX domain EMK97_RS18195 PF00425 chorismate binding enzyme EMK97_RS18195 PF04715 Anthranilate synthase component I, N terminal region EMK97_RS18200 PF05683 Fumarase C-terminus EMK97_RS18200 PF05681 Fumarate hydratase (Fumerase) EMK97_RS18225 PF03466 LysR substrate binding domain EMK97_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS18245 PF00753 Metallo-beta-lactamase superfamily EMK97_RS18250 PF03466 LysR substrate binding domain EMK97_RS18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS18255 PF01292 Prokaryotic cytochrome b561 EMK97_RS18260 PF04264 YceI-like domain EMK97_RS18270 PF09297 NADH pyrophosphatase zinc ribbon domain EMK97_RS18270 PF00293 NUDIX domain EMK97_RS18270 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain EMK97_RS18280 PF00108 Thiolase, N-terminal domain EMK97_RS18280 PF02803 Thiolase, C-terminal domain EMK97_RS18285 PF00202 Aminotransferase class-III EMK97_RS18290 PF01144 Coenzyme A transferase EMK97_RS18295 PF01144 Coenzyme A transferase EMK97_RS18300 PF01614 Bacterial transcriptional regulator EMK97_RS18300 PF09339 IclR helix-turn-helix domain EMK97_RS18305 PF02646 RmuC family EMK97_RS18320 PF00209 Sodium:neurotransmitter symporter family EMK97_RS18325 PF00753 Metallo-beta-lactamase superfamily EMK97_RS18335 PF00561 alpha/beta hydrolase fold EMK97_RS18345 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 EMK97_RS18355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EMK97_RS18360 PF01494 FAD binding domain EMK97_RS18365 PF00011 Hsp20/alpha crystallin family EMK97_RS18370 PF08534 Redoxin EMK97_RS18375 PF00486 Transcriptional regulatory protein, C terminal EMK97_RS18375 PF00072 Response regulator receiver domain EMK97_RS18380 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS18380 PF05230 MASE2 domain EMK97_RS18385 PF00795 Carbon-nitrogen hydrolase EMK97_RS18390 PF03471 Transporter associated domain EMK97_RS18390 PF00571 CBS domain EMK97_RS18395 PF02130 Uncharacterized protein family UPF0054 EMK97_RS18400 PF02562 PhoH-like protein EMK97_RS18405 PF04055 Radical SAM superfamily EMK97_RS18405 PF01938 TRAM domain EMK97_RS18405 PF00919 Uncharacterized protein family UPF0004 EMK97_RS18410 PF03707 Bacterial signalling protein N terminal repeat EMK97_RS18410 PF00563 EAL domain EMK97_RS18410 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS18415 PF01494 FAD binding domain EMK97_RS18455 PF06071 Protein of unknown function (DUF933) EMK97_RS18455 PF01926 50S ribosome-binding GTPase EMK97_RS18460 PF01195 Peptidyl-tRNA hydrolase EMK97_RS18465 PF14693 Ribosomal protein TL5, C-terminal domain EMK97_RS18465 PF01386 Ribosomal L25p family EMK97_RS18470 PF14572 Phosphoribosyl synthetase-associated domain EMK97_RS18470 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EMK97_RS18475 PF00288 GHMP kinases N terminal domain EMK97_RS18480 PF03550 Outer membrane lipoprotein LolB EMK97_RS18485 PF01488 Shikimate / quinate 5-dehydrogenase EMK97_RS18485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain EMK97_RS18485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain EMK97_RS18490 PF00472 RF-1 domain EMK97_RS18490 PF03462 PCRF domain EMK97_RS18495 PF13847 Methyltransferase domain EMK97_RS18495 PF17827 PrmC N-terminal domain EMK97_RS18505 PF13369 Transglutaminase-like superfamily EMK97_RS18515 PF00793 DAHP synthetase I family EMK97_RS18525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EMK97_RS18525 PF03466 LysR substrate binding domain EMK97_RS18535 PF04241 Protein of unknown function (DUF423) EMK97_RS18540 PF01728 FtsJ-like methyltransferase EMK97_RS18540 PF18125 RlmM ferredoxin-like domain EMK97_RS18545 PF00180 Isocitrate/isopropylmalate dehydrogenase EMK97_RS18545 PF18324 Hypothetical protein TT1725 EMK97_RS18555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EMK97_RS18555 PF01367 5'-3' exonuclease, C-terminal SAM fold EMK97_RS18560 PF11892 Domain of unknown function (DUF3412) EMK97_RS18560 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases EMK97_RS18560 PF03641 Possible lysine decarboxylase EMK97_RS18565 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS18575 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term EMK97_RS18575 PF14489 QueF-like protein EMK97_RS18580 PF07348 Syd protein (SUKH-2) EMK97_RS18600 PF00082 Subtilase family EMK97_RS18600 PF04151 Bacterial pre-peptidase C-terminal domain EMK97_RS18605 PF05922 Peptidase inhibitor I9 EMK97_RS18605 PF00082 Subtilase family EMK97_RS18610 PF00082 Subtilase family EMK97_RS18615 PF07494 Two component regulator propeller EMK97_RS18615 PF12833 Helix-turn-helix domain EMK97_RS18615 PF00072 Response regulator receiver domain EMK97_RS18615 PF07495 Y_Y_Y domain EMK97_RS18615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS18615 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EMK97_RS18620 PF00512 His Kinase A (phospho-acceptor) domain EMK97_RS18620 PF12833 Helix-turn-helix domain EMK97_RS18620 PF07494 Two component regulator propeller EMK97_RS18620 PF00072 Response regulator receiver domain EMK97_RS18620 PF07495 Y_Y_Y domain EMK97_RS18630 PF08453 Peptidase family M9 N-terminal EMK97_RS18630 PF01752 Collagenase EMK97_RS18640 PF00290 Tryptophan synthase alpha chain EMK97_RS18645 PF00291 Pyridoxal-phosphate dependent enzyme EMK97_RS18650 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EMK97_RS18650 PF00218 Indole-3-glycerol phosphate synthase EMK97_RS18655 PF02885 Glycosyl transferase family, helical bundle domain EMK97_RS18655 PF00591 Glycosyl transferase family, a/b domain EMK97_RS18660 PF00117 Glutamine amidotransferase class-I EMK97_RS18665 PF04715 Anthranilate synthase component I, N terminal region EMK97_RS18665 PF00425 chorismate binding enzyme EMK97_RS18670 PF02811 PHP domain EMK97_RS18675 PF01300 Telomere recombination EMK97_RS18680 PF01479 S4 domain EMK97_RS18680 PF00849 RNA pseudouridylate synthase EMK97_RS18685 PF01612 3'-5' exonuclease EMK97_RS18685 PF00570 HRDC domain EMK97_RS18690 PF05166 YcgL domain EMK97_RS18695 PF13406 Transglycosylase SLT domain EMK97_RS18700 PF03692 Putative zinc- or iron-chelating domain EMK97_RS18715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain EMK97_RS18715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain EMK97_RS18715 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch EMK97_RS18720 PF02233 NAD(P) transhydrogenase beta subunit EMK97_RS18725 PF03965 Penicillinase repressor EMK97_RS18735 PF00271 Helicase conserved C-terminal domain EMK97_RS18735 PF00270 DEAD/DEAH box helicase EMK97_RS18745 PF00990 Diguanylate cyclase, GGDEF domain EMK97_RS18750 PF02080 TrkA-C domain EMK97_RS18750 PF00999 Sodium/hydrogen exchanger family EMK97_RS18750 PF02254 TrkA-N domain EMK97_RS18765 PF01144 Coenzyme A transferase EMK97_RS18770 PF01144 Coenzyme A transferase EMK97_RS18775 PF00682 HMGL-like EMK97_RS18780 PF02785 Biotin carboxylase C-terminal domain EMK97_RS18780 PF00289 Biotin carboxylase, N-terminal domain EMK97_RS18780 PF00364 Biotin-requiring enzyme EMK97_RS18780 PF18140 Propionyl-coenzyme A carboxylase BT domain EMK97_RS18780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EMK97_RS18785 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS18790 PF01039 Carboxyl transferase domain EMK97_RS18795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS18795 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS18795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS18800 PF00376 MerR family regulatory protein EMK97_RS18800 PF09278 MerR, DNA binding EMK97_RS18805 PF02803 Thiolase, C-terminal domain EMK97_RS18805 PF00108 Thiolase, N-terminal domain EMK97_RS18810 PF02770 Acyl-CoA dehydrogenase, middle domain EMK97_RS18810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain EMK97_RS18810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain EMK97_RS18815 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS18820 PF00378 Enoyl-CoA hydratase/isomerase EMK97_RS18825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EMK97_RS18825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EMK97_RS18860 PF01554 MatE EMK97_RS18865 PF00440 Bacterial regulatory proteins, tetR family EMK97_RS18885 PF00850 Histone deacetylase domain EMK97_RS18890 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain EMK97_RS18890 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain EMK97_RS18905 PF14602 Hexapeptide repeat of succinyl-transferase EMK97_RS18905 PF12464 Maltose acetyltransferase EMK97_RS18915 PF01844 HNH endonuclease EMK97_RS18935 PF00075 RNase H EMK97_RS18940 PF00171 Aldehyde dehydrogenase family