locus-tag class description CKQ53_RS00070 PF02321 Outer membrane efflux protein CKQ53_RS00075 PF03412 Peptidase C39 family CKQ53_RS00075 PF00005 ABC transporter CKQ53_RS00075 PF00664 ABC transporter transmembrane region CKQ53_RS00080 PF00529 HlyD membrane-fusion protein of T1SS CKQ53_RS00085 PF03707 Bacterial signalling protein N terminal repeat CKQ53_RS00085 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS00085 PF00563 EAL domain CKQ53_RS00090 PF00563 EAL domain CKQ53_RS00095 PF01497 Periplasmic binding protein CKQ53_RS00105 PF12838 4Fe-4S dicluster domain CKQ53_RS00110 PF01648 4'-phosphopantetheinyl transferase superfamily CKQ53_RS00115 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CKQ53_RS00120 PF02565 Recombination protein O C terminal CKQ53_RS00120 PF11967 Recombination protein O N terminal CKQ53_RS00125 PF07650 KH domain CKQ53_RS00125 PF01926 50S ribosome-binding GTPase CKQ53_RS00130 PF00035 Double-stranded RNA binding motif CKQ53_RS00130 PF14622 Ribonuclease-III-like CKQ53_RS00135 PF10502 Signal peptidase, peptidase S26 CKQ53_RS00140 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS00140 PF03144 Elongation factor Tu domain 2 CKQ53_RS00140 PF06421 GTP-binding protein LepA C-terminus CKQ53_RS00140 PF00679 Elongation factor G C-terminus CKQ53_RS00145 PF03888 MucB/RseB N-terminal domain CKQ53_RS00145 PF17188 MucB/RseB C-terminal domain CKQ53_RS00150 PF03873 Anti sigma-E protein RseA, C-terminal domain CKQ53_RS00150 PF03872 Anti sigma-E protein RseA, N-terminal domain CKQ53_RS00155 PF08281 Sigma-70, region 4 CKQ53_RS00155 PF04542 Sigma-70 region 2 CKQ53_RS00160 PF05175 Methyltransferase small domain CKQ53_RS00165 PF00270 DEAD/DEAH box helicase CKQ53_RS00165 PF00271 Helicase conserved C-terminal domain CKQ53_RS00170 PF01228 Glycine radical CKQ53_RS00175 PF03167 Uracil DNA glycosylase superfamily CKQ53_RS00190 PF00749 tRNA synthetases class I (E and Q), catalytic domain CKQ53_RS00220 PF00239 Resolvase, N terminal domain CKQ53_RS00220 PF02796 Helix-turn-helix domain of resolvase CKQ53_RS00255 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CKQ53_RS00260 PF07484 Phage Tail Collar Domain CKQ53_RS00360 PF01464 Transglycosylase SLT domain CKQ53_RS00360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS00400 PF13401 AAA domain CKQ53_RS00400 PF01471 Putative peptidoglycan binding domain CKQ53_RS00410 PF08765 Mor transcription activator family CKQ53_RS00415 PF12857 TOBE-like domain CKQ53_RS00415 PF00005 ABC transporter CKQ53_RS00425 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS00435 PF00595 PDZ domain CKQ53_RS00440 PF13286 Phosphohydrolase-associated domain CKQ53_RS00440 PF01966 HD domain CKQ53_RS00445 PF01048 Phosphorylase superfamily CKQ53_RS00450 PF01521 Iron-sulphur cluster biosynthesis CKQ53_RS00455 PF00202 Aminotransferase class-III CKQ53_RS00465 PF01497 Periplasmic binding protein CKQ53_RS00470 PF00005 ABC transporter CKQ53_RS00475 PF14814 Bifunctional transglycosylase second domain CKQ53_RS00475 PF00905 Penicillin binding protein transpeptidase domain CKQ53_RS00475 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CKQ53_RS00475 PF00912 Transglycosylase CKQ53_RS00480 PF00270 DEAD/DEAH box helicase CKQ53_RS00480 PF04408 Helicase associated domain (HA2) CKQ53_RS00480 PF00271 Helicase conserved C-terminal domain CKQ53_RS00480 PF08482 ATP-dependent helicase C-terminal CKQ53_RS00485 PF02834 LigT like Phosphoesterase CKQ53_RS00490 PF03749 Sugar fermentation stimulation protein RE domain CKQ53_RS00490 PF17746 SfsA N-terminal OB domain CKQ53_RS00500 PF01258 Prokaryotic dksA/traR C4-type zinc finger CKQ53_RS00505 PF00749 tRNA synthetases class I (E and Q), catalytic domain CKQ53_RS00510 PF01743 Poly A polymerase head domain CKQ53_RS00510 PF12627 Probable RNA and SrmB- binding site of polymerase A CKQ53_RS00510 PF12626 Polymerase A arginine-rich C-terminus CKQ53_RS00515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CKQ53_RS00520 PF02548 Ketopantoate hydroxymethyltransferase CKQ53_RS00525 PF02569 Pantoate-beta-alanine ligase CKQ53_RS00530 PF02261 Aspartate decarboxylase CKQ53_RS00535 PF01522 Polysaccharide deacetylase CKQ53_RS00540 PF01061 ABC-2 type transporter CKQ53_RS00545 PF00005 ABC transporter CKQ53_RS00550 PF00484 Carbonic anhydrase CKQ53_RS00555 PF00156 Phosphoribosyl transferase domain CKQ53_RS00570 PF08402 TOBE domain CKQ53_RS00570 PF00005 ABC transporter CKQ53_RS00580 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CKQ53_RS00585 PF17284 Spermidine synthase tetramerisation domain CKQ53_RS00590 PF02675 S-adenosylmethionine decarboxylase CKQ53_RS00600 PF07972 NrdI Flavodoxin like CKQ53_RS00605 PF02867 Ribonucleotide reductase, barrel domain CKQ53_RS00605 PF00317 Ribonucleotide reductase, all-alpha domain CKQ53_RS00605 PF08343 Ribonucleotide reductase N-terminal CKQ53_RS00610 PF00268 Ribonucleotide reductase, small chain CKQ53_RS00620 PF12704 MacB-like periplasmic core domain CKQ53_RS00620 PF00005 ABC transporter CKQ53_RS00620 PF02687 FtsX-like permease family CKQ53_RS00630 PF00072 Response regulator receiver domain CKQ53_RS00630 PF00158 Sigma-54 interaction domain CKQ53_RS00630 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS00635 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS00635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS00635 PF00989 PAS fold CKQ53_RS00655 PF00550 Phosphopantetheine attachment site CKQ53_RS00670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CKQ53_RS00670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CKQ53_RS00685 PF00501 AMP-binding enzyme CKQ53_RS00685 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS00695 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS00695 PF00501 AMP-binding enzyme CKQ53_RS00700 PF00501 AMP-binding enzyme CKQ53_RS00700 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS00705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKQ53_RS00705 PF02770 Acyl-CoA dehydrogenase, middle domain CKQ53_RS00705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKQ53_RS00725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKQ53_RS00725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKQ53_RS00725 PF02770 Acyl-CoA dehydrogenase, middle domain CKQ53_RS00780 PF00501 AMP-binding enzyme CKQ53_RS00785 PF08242 Methyltransferase domain CKQ53_RS00785 PF00550 Phosphopantetheine attachment site CKQ53_RS00785 PF00501 AMP-binding enzyme CKQ53_RS00785 PF00668 Condensation domain CKQ53_RS00790 PF08264 Anticodon-binding domain of tRNA CKQ53_RS00790 PF09334 tRNA synthetases class I (M) CKQ53_RS00790 PF01588 Putative tRNA binding domain CKQ53_RS00795 PF01266 FAD dependent oxidoreductase CKQ53_RS00800 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CKQ53_RS00810 PF02655 ATP-grasp domain CKQ53_RS00810 PF00206 Lyase CKQ53_RS00815 PF00067 Cytochrome P450 CKQ53_RS00820 PF02770 Acyl-CoA dehydrogenase, middle domain CKQ53_RS00820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKQ53_RS00820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CKQ53_RS00845 PF00975 Thioesterase domain CKQ53_RS00855 PF00929 Exonuclease CKQ53_RS00860 PF00075 RNase H CKQ53_RS00865 PF08241 Methyltransferase domain CKQ53_RS00870 PF16123 Hydroxyacylglutathione hydrolase C-terminus CKQ53_RS00870 PF00753 Metallo-beta-lactamase superfamily CKQ53_RS00875 PF01476 LysM domain CKQ53_RS00875 PF01464 Transglycosylase SLT domain CKQ53_RS00880 PF03372 Endonuclease/Exonuclease/phosphatase family CKQ53_RS00890 PF06969 HemN C-terminal domain CKQ53_RS00890 PF04055 Radical SAM superfamily CKQ53_RS00895 PF00535 Glycosyl transferase family 2 CKQ53_RS00910 PF00202 Aminotransferase class-III CKQ53_RS00915 PF00732 GMC oxidoreductase CKQ53_RS00915 PF05199 GMC oxidoreductase CKQ53_RS00920 PF00982 Glycosyltransferase family 20 CKQ53_RS00925 PF02358 Trehalose-phosphatase CKQ53_RS00960 PF02861 Clp amino terminal domain, pathogenicity island component CKQ53_RS00960 PF10431 C-terminal, D2-small domain, of ClpB protein CKQ53_RS00960 PF07724 AAA domain (Cdc48 subfamily) CKQ53_RS00960 PF00004 ATPase family associated with various cellular activities (AAA) CKQ53_RS00960 PF17871 AAA lid domain CKQ53_RS00965 PF02578 Multi-copper polyphenol oxidoreductase laccase CKQ53_RS00980 PF13525 Outer membrane lipoprotein CKQ53_RS00985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CKQ53_RS00990 PF01817 Chorismate mutase type II CKQ53_RS00990 PF00800 Prephenate dehydratase CKQ53_RS00995 PF01817 Chorismate mutase type II CKQ53_RS00995 PF02153 Prephenate dehydrogenase CKQ53_RS01000 PF00793 DAHP synthetase I family CKQ53_RS01040 PF04984 Phage tail sheath protein subtilisin-like domain CKQ53_RS01040 PF17482 Phage tail sheath C-terminal domain CKQ53_RS01080 PF01245 Ribosomal protein L19 CKQ53_RS01085 PF01746 tRNA (Guanine-1)-methyltransferase CKQ53_RS01090 PF05239 PRC-barrel domain CKQ53_RS01090 PF01782 RimM N-terminal domain CKQ53_RS01095 PF00886 Ribosomal protein S16 CKQ53_RS01100 PF02978 Signal peptide binding domain CKQ53_RS01100 PF02881 SRP54-type protein, helical bundle domain CKQ53_RS01100 PF00448 SRP54-type protein, GTPase domain CKQ53_RS01105 PF01578 Cytochrome C assembly protein CKQ53_RS01110 PF02664 S-Ribosylhomocysteinase (LuxS) CKQ53_RS01115 PF04262 Glutamate-cysteine ligase CKQ53_RS01120 PF09335 SNARE associated Golgi protein CKQ53_RS01125 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS01150 PF02599 Global regulator protein family CKQ53_RS01160 PF02272 DHHA1 domain CKQ53_RS01160 PF01411 tRNA synthetases class II (A) CKQ53_RS01160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CKQ53_RS01165 PF02631 RecX family CKQ53_RS01170 PF00154 recA bacterial DNA recombination protein CKQ53_RS01175 PF02464 Competence-damaged protein CKQ53_RS01185 PF00106 short chain dehydrogenase CKQ53_RS01190 PF00106 short chain dehydrogenase CKQ53_RS01195 PF06628 Catalase-related immune-responsive CKQ53_RS01195 PF00199 Catalase CKQ53_RS01205 PF07859 alpha/beta hydrolase fold CKQ53_RS01220 PF07119 Protein of unknown function (DUF1375) CKQ53_RS01230 PF00199 Catalase CKQ53_RS01230 PF06628 Catalase-related immune-responsive CKQ53_RS01230 PF18011 C-terminal domain found in long catalases CKQ53_RS01335 PF06069 PerC transcriptional activator CKQ53_RS01400 PF14659 Phage integrase, N-terminal SAM-like domain CKQ53_RS01400 PF13356 Arm DNA-binding domain CKQ53_RS01400 PF00589 Phage integrase family CKQ53_RS01410 PF00171 Aldehyde dehydrogenase family CKQ53_RS01415 PF00696 Amino acid kinase family CKQ53_RS01415 PF01472 PUA domain CKQ53_RS01420 PF07417 Sigma factor-binding transcriptional regulator Crl CKQ53_RS01425 PF00691 OmpA family CKQ53_RS01430 PF17152 Periplasmic sensor domain CKQ53_RS01430 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS01440 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CKQ53_RS01445 PF00156 Phosphoribosyl transferase domain CKQ53_RS01450 PF07687 Peptidase dimerisation domain CKQ53_RS01450 PF01546 Peptidase family M20/M25/M40 CKQ53_RS01455 PF00817 impB/mucB/samB family CKQ53_RS01455 PF11799 impB/mucB/samB family C-terminal domain CKQ53_RS01455 PF11798 IMS family HHH motif CKQ53_RS01460 PF03734 L,D-transpeptidase catalytic domain CKQ53_RS01465 PF13230 Glutamine amidotransferases class-II CKQ53_RS01470 PF13580 SIS domain CKQ53_RS01475 PF07859 alpha/beta hydrolase fold CKQ53_RS01480 PF01636 Phosphotransferase enzyme family CKQ53_RS01485 PF01008 Initiation factor 2 subunit family CKQ53_RS01490 PF03079 ARD/ARD' family CKQ53_RS01500 PF00596 Class II Aldolase and Adducin N-terminal domain CKQ53_RS01510 PF00155 Aminotransferase class I and II CKQ53_RS01515 PF00795 Carbon-nitrogen hydrolase CKQ53_RS01520 PF01546 Peptidase family M20/M25/M40 CKQ53_RS01520 PF07687 Peptidase dimerisation domain CKQ53_RS01525 PF00266 Aminotransferase class-V CKQ53_RS01530 PF00005 ABC transporter CKQ53_RS01535 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS01540 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS01545 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS01570 PF01425 Amidase CKQ53_RS01585 PF01177 Asp/Glu/Hydantoin racemase CKQ53_RS01595 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CKQ53_RS01600 PF00128 Alpha amylase, catalytic domain CKQ53_RS01605 PF00128 Alpha amylase, catalytic domain CKQ53_RS01610 PF00571 CBS domain CKQ53_RS01610 PF00005 ABC transporter CKQ53_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS01620 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CKQ53_RS01625 PF07690 Major Facilitator Superfamily CKQ53_RS01630 PF01047 MarR family CKQ53_RS01635 PF00529 HlyD membrane-fusion protein of T1SS CKQ53_RS01635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKQ53_RS01640 PF07690 Major Facilitator Superfamily CKQ53_RS01645 PF02435 Levansucrase/Invertase CKQ53_RS01650 PF08032 RNA 2'-O ribose methyltransferase substrate binding CKQ53_RS01650 PF00588 SpoU rRNA Methylase family CKQ53_RS01655 PF00085 Thioredoxin CKQ53_RS01660 PF03942 DTW domain CKQ53_RS01665 PF13091 PLD-like domain CKQ53_RS01670 PF00083 Sugar (and other) transporter CKQ53_RS01715 PF00005 ABC transporter CKQ53_RS01715 PF09383 NIL domain CKQ53_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS01725 PF03180 NLPA lipoprotein CKQ53_RS01730 PF16358 RcsF lipoprotein CKQ53_RS01735 PF18389 TrmO C-terminal domain CKQ53_RS01735 PF01980 tRNA-methyltransferase O CKQ53_RS01740 PF03129 Anticodon binding domain CKQ53_RS01740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKQ53_RS01740 PF04073 Aminoacyl-tRNA editing domain CKQ53_RS01745 PF04545 Sigma-70, region 4 CKQ53_RS01745 PF04542 Sigma-70 region 2 CKQ53_RS01745 PF00140 Sigma-70 factor, region 1.2 CKQ53_RS01745 PF04539 Sigma-70 region 3 CKQ53_RS01750 PF01551 Peptidase family M23 CKQ53_RS01750 PF01476 LysM domain CKQ53_RS01760 PF01142 tRNA pseudouridine synthase D (TruD) CKQ53_RS01765 PF02542 YgbB family CKQ53_RS01770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CKQ53_RS01775 PF04977 Septum formation initiator CKQ53_RS01790 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS01795 PF01507 Phosphoadenosine phosphosulfate reductase family CKQ53_RS01800 PF10414 Sirohaem synthase dimerisation region CKQ53_RS01800 PF14824 Sirohaem biosynthesis protein central CKQ53_RS01800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CKQ53_RS01810 PF01507 Phosphoadenosine phosphosulfate reductase family CKQ53_RS01815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CKQ53_RS01815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CKQ53_RS01820 PF00258 Flavodoxin CKQ53_RS01820 PF00667 FAD binding domain CKQ53_RS01820 PF00175 Oxidoreductase NAD-binding domain CKQ53_RS01825 PF01242 6-pyruvoyl tetrahydropterin synthase CKQ53_RS01830 PF04055 Radical SAM superfamily CKQ53_RS01835 PF00753 Metallo-beta-lactamase superfamily CKQ53_RS01840 PF03952 Enolase, N-terminal domain CKQ53_RS01840 PF00113 Enolase, C-terminal TIM barrel domain CKQ53_RS01845 PF06418 CTP synthase N-terminus CKQ53_RS01845 PF00117 Glutamine amidotransferase class-I CKQ53_RS01850 PF03819 MazG nucleotide pyrophosphohydrolase domain CKQ53_RS01855 PF04607 Region found in RelA / SpoT proteins CKQ53_RS01855 PF13291 ACT domain CKQ53_RS01855 PF02824 TGS domain CKQ53_RS01860 PF01938 TRAM domain CKQ53_RS01860 PF05958 tRNA (Uracil-5-)-methyltransferase CKQ53_RS01865 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CKQ53_RS01865 PF00072 Response regulator receiver domain CKQ53_RS01865 PF00672 HAMP domain CKQ53_RS01865 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS01865 PF01627 Hpt domain CKQ53_RS01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS01870 PF08447 PAS fold CKQ53_RS01885 PF12843 Putative quorum-sensing-regulated virulence factor CKQ53_RS01890 PF12826 Helix-hairpin-helix motif CKQ53_RS01890 PF03120 NAD-dependent DNA ligase OB-fold domain CKQ53_RS01890 PF01653 NAD-dependent DNA ligase adenylation domain CKQ53_RS01890 PF00533 BRCA1 C Terminus (BRCT) domain CKQ53_RS01890 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CKQ53_RS01895 PF01467 Cytidylyltransferase-like CKQ53_RS01895 PF00294 pfkB family carbohydrate kinase CKQ53_RS01900 PF03710 Glutamate-ammonia ligase adenylyltransferase CKQ53_RS01900 PF08335 GlnD PII-uridylyltransferase CKQ53_RS01905 PF01928 CYTH domain CKQ53_RS01910 PF08239 Bacterial SH3 domain CKQ53_RS01915 PF12627 Probable RNA and SrmB- binding site of polymerase A CKQ53_RS01915 PF01743 Poly A polymerase head domain CKQ53_RS01915 PF01966 HD domain CKQ53_RS01920 PF02673 Bacitracin resistance protein BacA CKQ53_RS01925 PF02152 Dihydroneopterin aldolase CKQ53_RS01930 PF02660 Glycerol-3-phosphate acyltransferase CKQ53_RS01935 PF00672 HAMP domain CKQ53_RS01935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS01935 PF02203 Tar ligand binding domain homologue CKQ53_RS01940 PF00719 Inorganic pyrophosphatase CKQ53_RS01945 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CKQ53_RS01950 PF04357 TamB, inner membrane protein subunit of TAM complex CKQ53_RS01955 PF01103 Surface antigen CKQ53_RS01955 PF17243 POTRA domain TamA domain 1 CKQ53_RS01955 PF07244 Surface antigen variable number repeat CKQ53_RS01960 PF01625 Peptide methionine sulfoxide reductase CKQ53_RS01965 PF01595 Cyclin M transmembrane N-terminal domain CKQ53_RS01965 PF03471 Transporter associated domain CKQ53_RS01965 PF00571 CBS domain CKQ53_RS01970 PF06526 Protein of unknown function (DUF1107) CKQ53_RS01975 PF00459 Inositol monophosphatase family CKQ53_RS01985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS01985 PF00005 ABC transporter CKQ53_RS01990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS01990 PF00005 ABC transporter CKQ53_RS01995 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS01995 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS02000 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS02005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS02010 PF03502 Nucleoside-specific channel-forming protein, Tsx CKQ53_RS02015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CKQ53_RS02015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CKQ53_RS02020 PF04225 Opacity-associated protein A LysM-like domain CKQ53_RS02020 PF08525 Opacity-associated protein A N-terminal motif CKQ53_RS02025 PF03948 Ribosomal protein L9, C-terminal domain CKQ53_RS02025 PF01281 Ribosomal protein L9, N-terminal domain CKQ53_RS02030 PF01084 Ribosomal protein S18 CKQ53_RS02035 PF00436 Single-strand binding protein family CKQ53_RS02040 PF01250 Ribosomal protein S6 CKQ53_RS02050 PF00326 Prolyl oligopeptidase family CKQ53_RS02055 PF00472 RF-1 domain CKQ53_RS02065 PF07338 Protein of unknown function (DUF1471) CKQ53_RS02075 PF00588 SpoU rRNA Methylase family CKQ53_RS02075 PF08032 RNA 2'-O ribose methyltransferase substrate binding CKQ53_RS02080 PF00575 S1 RNA binding domain CKQ53_RS02080 PF00773 RNB domain CKQ53_RS02080 PF08206 Ribonuclease B OB domain CKQ53_RS02080 PF08461 Ribonuclease R winged-helix domain CKQ53_RS02080 PF17876 Cold shock domain CKQ53_RS02085 PF02082 Transcriptional regulator CKQ53_RS02090 PF02203 Tar ligand binding domain homologue CKQ53_RS02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS02090 PF00672 HAMP domain CKQ53_RS02105 PF07969 Amidohydrolase family CKQ53_RS02115 PF01168 Alanine racemase, N-terminal domain CKQ53_RS02120 PF14748 Pyrroline-5-carboxylate reductase dimerisation CKQ53_RS02120 PF03807 NADP oxidoreductase coenzyme F420-dependent CKQ53_RS02125 PF02325 YGGT family CKQ53_RS02130 PF02594 Uncharacterised ACR, YggU family COG1872 CKQ53_RS02135 PF01725 Ham1 family CKQ53_RS02140 PF06969 HemN C-terminal domain CKQ53_RS02140 PF04055 Radical SAM superfamily CKQ53_RS02145 PF08085 Entericidin EcnA/B family CKQ53_RS02150 PF13673 Acetyltransferase (GNAT) domain CKQ53_RS02155 PF07690 Major Facilitator Superfamily CKQ53_RS02160 PF01553 Acyltransferase CKQ53_RS02160 PF00501 AMP-binding enzyme CKQ53_RS02160 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS02165 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS02170 PF13556 PucR C-terminal helix-turn-helix domain CKQ53_RS02170 PF17853 GGDEF-like domain CKQ53_RS02170 PF05651 Putative sugar diacid recognition CKQ53_RS02180 PF02447 GntP family permease CKQ53_RS02185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CKQ53_RS02185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CKQ53_RS02190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS02190 PF03466 LysR substrate binding domain CKQ53_RS02200 PF01207 Dihydrouridine synthase (Dus) CKQ53_RS02205 PF09583 Phage shock protein G (Phageshock_PspG) CKQ53_RS02210 PF00107 Zinc-binding dehydrogenase CKQ53_RS02210 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS02215 PF03796 DnaB-like helicase C terminal domain CKQ53_RS02215 PF00772 DnaB-like helicase N terminal domain CKQ53_RS02220 PF00842 Alanine racemase, C-terminal domain CKQ53_RS02220 PF01168 Alanine racemase, N-terminal domain CKQ53_RS02225 PF07338 Protein of unknown function (DUF1471) CKQ53_RS02230 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS02235 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS02245 PF00155 Aminotransferase class I and II CKQ53_RS02250 PF02203 Tar ligand binding domain homologue CKQ53_RS02250 PF00672 HAMP domain CKQ53_RS02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS02255 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS02255 PF00072 Response regulator receiver domain CKQ53_RS02260 PF01894 Uncharacterised protein family UPF0047 CKQ53_RS02265 PF17760 UvrA interaction domain CKQ53_RS02265 PF17755 UvrA DNA-binding domain CKQ53_RS02265 PF00005 ABC transporter CKQ53_RS02270 PF00436 Single-strand binding protein family CKQ53_RS02280 PF01670 Glycosyl hydrolase family 12 CKQ53_RS02285 PF01232 Mannitol dehydrogenase Rossmann domain CKQ53_RS02285 PF08125 Mannitol dehydrogenase C-terminal domain CKQ53_RS02295 PF00005 ABC transporter CKQ53_RS02300 PF00950 ABC 3 transport family CKQ53_RS02305 PF01297 Zinc-uptake complex component A periplasmic CKQ53_RS02310 PF06062 Uncharacterised protein family (UPF0231) CKQ53_RS02315 PF06434 Aconitate hydratase 2 N-terminus CKQ53_RS02315 PF00330 Aconitase family (aconitate hydratase) CKQ53_RS02315 PF11791 Aconitate B N-terminal domain CKQ53_RS02325 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS02325 PF00593 TonB dependent receptor CKQ53_RS02335 PF03972 MmgE/PrpD family CKQ53_RS02340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CKQ53_RS02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS02345 PF02817 e3 binding domain CKQ53_RS02345 PF00364 Biotin-requiring enzyme CKQ53_RS02345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CKQ53_RS02350 PF00456 Transketolase, thiamine diphosphate binding domain CKQ53_RS02350 PF17831 Pyruvate dehydrogenase E1 component middle domain CKQ53_RS02355 PF07729 FCD domain CKQ53_RS02355 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS02360 PF00324 Amino acid permease CKQ53_RS02370 PF17113 Regulatory signalling modulator protein AmpE CKQ53_RS02375 PF01510 N-acetylmuramoyl-L-alanine amidase CKQ53_RS02380 PF07963 Prokaryotic N-terminal methylation motif CKQ53_RS02385 PF00437 Type II/IV secretion system protein CKQ53_RS02385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CKQ53_RS02390 PF00482 Type II secretion system (T2SS), protein F CKQ53_RS02400 PF01121 Dephospho-CoA kinase CKQ53_RS02405 PF07072 Cell division protein CKQ53_RS02410 PF03884 DNA gyrase inhibitor YacG CKQ53_RS02415 PF00293 NUDIX domain CKQ53_RS02420 PF07516 SecA Wing and Scaffold domain CKQ53_RS02420 PF01043 SecA preprotein cross-linking domain CKQ53_RS02420 PF07517 SecA DEAD-like domain CKQ53_RS02420 PF02810 SEC-C motif CKQ53_RS02425 PF06558 Secretion monitor precursor protein (SecM) CKQ53_RS02435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CKQ53_RS02440 PF12327 FtsZ family, C-terminal domain CKQ53_RS02440 PF00091 Tubulin/FtsZ family, GTPase domain CKQ53_RS02445 PF02491 SHS2 domain inserted in FTSA CKQ53_RS02450 PF08478 POTRA domain, FtsQ-type CKQ53_RS02450 PF03799 Cell division protein FtsQ CKQ53_RS02455 PF07478 D-ala D-ala ligase C-terminus CKQ53_RS02455 PF01820 D-ala D-ala ligase N-terminus CKQ53_RS02460 PF02875 Mur ligase family, glutamate ligase domain CKQ53_RS02460 PF01225 Mur ligase family, catalytic domain CKQ53_RS02460 PF08245 Mur ligase middle domain CKQ53_RS02465 PF04101 Glycosyltransferase family 28 C-terminal domain CKQ53_RS02465 PF03033 Glycosyltransferase family 28 N-terminal domain CKQ53_RS02470 PF01098 Cell cycle protein CKQ53_RS02475 PF02875 Mur ligase family, glutamate ligase domain CKQ53_RS02475 PF08245 Mur ligase middle domain CKQ53_RS02480 PF00953 Glycosyl transferase family 4 CKQ53_RS02480 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CKQ53_RS02485 PF02875 Mur ligase family, glutamate ligase domain CKQ53_RS02485 PF08245 Mur ligase middle domain CKQ53_RS02485 PF01225 Mur ligase family, catalytic domain CKQ53_RS02490 PF08245 Mur ligase middle domain CKQ53_RS02490 PF02875 Mur ligase family, glutamate ligase domain CKQ53_RS02490 PF01225 Mur ligase family, catalytic domain CKQ53_RS02495 PF00905 Penicillin binding protein transpeptidase domain CKQ53_RS02495 PF03717 Penicillin-binding Protein dimerisation domain CKQ53_RS02500 PF04999 Cell division protein FtsL CKQ53_RS02505 PF01795 MraW methylase family CKQ53_RS02510 PF02381 MraZ protein, putative antitoxin-like CKQ53_RS02515 PF06610 L-alanine exporter CKQ53_RS02520 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS02520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CKQ53_RS02530 PF00682 HMGL-like CKQ53_RS02530 PF08502 LeuA allosteric (dimerisation) domain CKQ53_RS02535 PF00180 Isocitrate/isopropylmalate dehydrogenase CKQ53_RS02540 PF00330 Aconitase family (aconitate hydratase) CKQ53_RS02545 PF00694 Aconitase C-terminal domain CKQ53_RS02560 PF00083 Sugar (and other) transporter CKQ53_RS02560 PF08946 Osmosensory transporter coiled coil CKQ53_RS02570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS02570 PF12793 Sugar transport-related sRNA regulator N-term CKQ53_RS02580 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS02585 PF00005 ABC transporter CKQ53_RS02595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS02595 PF00205 Thiamine pyrophosphate enzyme, central domain CKQ53_RS02595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS02600 PF01842 ACT domain CKQ53_RS02605 PF09335 SNARE associated Golgi protein CKQ53_RS02610 PF00005 ABC transporter CKQ53_RS02620 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS02620 PF11862 Domain of unknown function (DUF3382) CKQ53_RS02625 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS02630 PF13458 Periplasmic binding protein CKQ53_RS02635 PF03104 DNA polymerase family B, exonuclease domain CKQ53_RS02635 PF00136 DNA polymerase family B CKQ53_RS02645 PF00271 Helicase conserved C-terminal domain CKQ53_RS02645 PF00176 SNF2 family N-terminal domain CKQ53_RS02645 PF18339 RapA N-terminal Tudor like domain 1 CKQ53_RS02645 PF18337 RapA N-terminal Tudor like domain CKQ53_RS02645 PF12137 RNA polymerase recycling family C-terminal CKQ53_RS02650 PF00849 RNA pseudouridylate synthase CKQ53_RS02655 PF00226 DnaJ domain CKQ53_RS02655 PF05099 Tellurite resistance protein TerB CKQ53_RS02660 PF03968 OstA-like protein CKQ53_RS02660 PF04453 LPS transport system D CKQ53_RS02665 PF09312 SurA N-terminal domain CKQ53_RS02670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CKQ53_RS02675 PF00398 Ribosomal RNA adenine dimethylase CKQ53_RS02680 PF04379 ApaG domain CKQ53_RS02685 PF00149 Calcineurin-like phosphoesterase CKQ53_RS02695 PF00186 Dihydrofolate reductase CKQ53_RS02700 PF12821 Threonine/Serine exporter, ThrE CKQ53_RS02705 PF06738 Putative threonine/serine exporter CKQ53_RS02715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKQ53_RS02715 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CKQ53_RS02715 PF02142 MGS-like domain CKQ53_RS02720 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CKQ53_RS02720 PF00117 Glutamine amidotransferase class-I CKQ53_RS02725 PF01113 Dihydrodipicolinate reductase, N-terminus CKQ53_RS02725 PF05173 Dihydrodipicolinate reductase, C-terminus CKQ53_RS02730 PF02401 LytB protein CKQ53_RS02735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CKQ53_RS02740 PF01252 Signal peptidase (SPase) II CKQ53_RS02745 PF00133 tRNA synthetases class I (I, L, M and V) CKQ53_RS02745 PF06827 Zinc finger found in FPG and IleRS CKQ53_RS02745 PF08264 Anticodon-binding domain of tRNA CKQ53_RS02750 PF01687 Riboflavin kinase CKQ53_RS02750 PF06574 FAD synthetase CKQ53_RS02760 PF01649 Ribosomal protein S20 CKQ53_RS02765 PF06965 Na+/H+ antiporter 1 CKQ53_RS02770 PF03009 Glycerophosphoryl diester phosphodiesterase family CKQ53_RS02775 PF01556 DnaJ C terminal domain CKQ53_RS02775 PF00684 DnaJ central domain CKQ53_RS02775 PF00226 DnaJ domain CKQ53_RS02780 PF00012 Hsp70 protein CKQ53_RS02785 PF07690 Major Facilitator Superfamily CKQ53_RS02790 PF00994 Probable molybdopterin binding domain CKQ53_RS02795 PF17151 Periplasmic sensor domain CKQ53_RS02795 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS02800 PF00923 Transaldolase/Fructose-6-phosphate aldolase CKQ53_RS02805 PF03883 Peroxide stress protein YaaA CKQ53_RS02815 PF00561 alpha/beta hydrolase fold CKQ53_RS02820 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS02825 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CKQ53_RS02825 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CKQ53_RS02830 PF08544 GHMP kinases C terminal CKQ53_RS02830 PF00288 GHMP kinases N terminal domain CKQ53_RS02830 PF10509 Galactokinase galactose-binding signature CKQ53_RS02835 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS02835 PF14821 Threonine synthase N terminus CKQ53_RS02840 PF08544 GHMP kinases C terminal CKQ53_RS02840 PF00288 GHMP kinases N terminal domain CKQ53_RS02845 PF03447 Homoserine dehydrogenase, NAD binding domain CKQ53_RS02845 PF00742 Homoserine dehydrogenase CKQ53_RS02845 PF00696 Amino acid kinase family CKQ53_RS02845 PF13840 ACT domain CKQ53_RS02845 PF01842 ACT domain CKQ53_RS02855 PF00588 SpoU rRNA Methylase family CKQ53_RS02860 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS02860 PF00072 Response regulator receiver domain CKQ53_RS02865 PF05981 CreA protein CKQ53_RS02870 PF12833 Helix-turn-helix domain CKQ53_RS02870 PF06445 GyrI-like small molecule binding domain CKQ53_RS02875 PF00300 Histidine phosphatase superfamily (branch 1) CKQ53_RS02880 PF01931 Protein of unknown function DUF84 CKQ53_RS02885 PF01371 Trp repressor protein CKQ53_RS02890 PF14718 Soluble lytic murein transglycosylase L domain CKQ53_RS02890 PF01464 Transglycosylase SLT domain CKQ53_RS02895 PF12848 ABC transporter CKQ53_RS02895 PF00005 ABC transporter CKQ53_RS02900 PF03466 LysR substrate binding domain CKQ53_RS02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS02905 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS02905 PF00107 Zinc-binding dehydrogenase CKQ53_RS02910 PF01842 ACT domain CKQ53_RS02910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS02910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKQ53_RS02915 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CKQ53_RS02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS02920 PF03466 LysR substrate binding domain CKQ53_RS02925 PF04402 Protein of unknown function (DUF541) CKQ53_RS02935 PF08502 LeuA allosteric (dimerisation) domain CKQ53_RS02935 PF00682 HMGL-like CKQ53_RS02940 PF05552 Conserved TM helix CKQ53_RS02940 PF00924 Mechanosensitive ion channel CKQ53_RS02945 PF01116 Fructose-bisphosphate aldolase class-II CKQ53_RS02950 PF00162 Phosphoglycerate kinase CKQ53_RS02955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CKQ53_RS02955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CKQ53_RS02960 PF02779 Transketolase, pyrimidine binding domain CKQ53_RS02960 PF00456 Transketolase, thiamine diphosphate binding domain CKQ53_RS02960 PF02780 Transketolase, C-terminal domain CKQ53_RS02965 PF01435 Peptidase family M48 CKQ53_RS02970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CKQ53_RS02970 PF17944 Arginine decarboxylase C-terminal helical extension CKQ53_RS02970 PF17810 Arginine decarboxylase helical bundle domain CKQ53_RS02980 PF02772 S-adenosylmethionine synthetase, central domain CKQ53_RS02980 PF00438 S-adenosylmethionine synthetase, N-terminal domain CKQ53_RS02980 PF02773 S-adenosylmethionine synthetase, C-terminal domain CKQ53_RS02985 PF00083 Sugar (and other) transporter CKQ53_RS02990 PF17283 SprT-like zinc ribbon domain CKQ53_RS02990 PF10263 SprT-like family CKQ53_RS03000 PF04452 RNA methyltransferase CKQ53_RS03005 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CKQ53_RS03005 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CKQ53_RS03010 PF02622 Uncharacterized ACR, COG1678 CKQ53_RS03015 PF03652 Holliday junction resolvase CKQ53_RS03025 PF02875 Mur ligase family, glutamate ligase domain CKQ53_RS03025 PF01225 Mur ligase family, catalytic domain CKQ53_RS03025 PF08245 Mur ligase middle domain CKQ53_RS03030 PF00709 Adenylosuccinate synthetase CKQ53_RS03035 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CKQ53_RS03040 PF01145 SPFH domain / Band 7 family CKQ53_RS03045 PF12221 Bacterial membrane protein N terminal CKQ53_RS03045 PF01145 SPFH domain / Band 7 family CKQ53_RS03055 PF17209 Hfq protein CKQ53_RS03065 PF08676 MutL C terminal dimerisation domain CKQ53_RS03065 PF01119 DNA mismatch repair protein, C-terminal domain CKQ53_RS03070 PF01520 N-acetylmuramoyl-L-alanine amidase CKQ53_RS03075 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CKQ53_RS03080 PF01256 Carbohydrate kinase CKQ53_RS03080 PF03853 YjeF-related protein N-terminus CKQ53_RS03085 PF01810 LysE type translocator CKQ53_RS03100 PF00202 Aminotransferase class-III CKQ53_RS03110 PF07690 Major Facilitator Superfamily CKQ53_RS03115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKQ53_RS03115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS03120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS03120 PF03466 LysR substrate binding domain CKQ53_RS03135 PF05593 RHS Repeat CKQ53_RS03135 PF03527 RHS protein CKQ53_RS03150 PF05593 RHS Repeat CKQ53_RS03150 PF03527 RHS protein CKQ53_RS03175 PF04717 Type VI secretion system, phage-baseplate injector CKQ53_RS03180 PF05638 Type VI secretion system effector, Hcp CKQ53_RS03185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS03195 PF00128 Alpha amylase, catalytic domain CKQ53_RS03200 PF01810 LysE type translocator CKQ53_RS03205 PF00419 Fimbrial protein CKQ53_RS03210 PF00419 Fimbrial protein CKQ53_RS03215 PF00419 Fimbrial protein CKQ53_RS03225 PF13953 PapC C-terminal domain CKQ53_RS03225 PF13954 PapC N-terminal domain CKQ53_RS03225 PF00577 Outer membrane usher protein CKQ53_RS03230 PF02753 Pili assembly chaperone PapD, C-terminal domain CKQ53_RS03230 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CKQ53_RS03235 PF00419 Fimbrial protein CKQ53_RS03260 PF00929 Exonuclease CKQ53_RS03265 PF03193 RsgA GTPase CKQ53_RS03270 PF02666 Phosphatidylserine decarboxylase CKQ53_RS03275 PF12794 Mechanosensitive ion channel inner membrane domain 1 CKQ53_RS03275 PF12795 Mechanosensitive ion channel porin domain CKQ53_RS03275 PF00924 Mechanosensitive ion channel CKQ53_RS03280 PF00152 tRNA synthetases class II (D, K and N) CKQ53_RS03285 PF00890 FAD binding domain CKQ53_RS03285 PF02910 Fumarate reductase flavoprotein C-term CKQ53_RS03290 PF13085 2Fe-2S iron-sulfur cluster binding domain CKQ53_RS03290 PF13183 4Fe-4S dicluster domain CKQ53_RS03295 PF02300 Fumarate reductase subunit C CKQ53_RS03300 PF02313 Fumarate reductase subunit D CKQ53_RS03305 PF08212 Lipocalin-like domain CKQ53_RS03310 PF08207 Elongation factor P (EF-P) KOW-like domain CKQ53_RS03310 PF01132 Elongation factor P (EF-P) OB domain CKQ53_RS03310 PF09285 Elongation factor P, C-terminal CKQ53_RS03315 PF04055 Radical SAM superfamily CKQ53_RS03320 PF13698 Domain of unknown function (DUF4156) CKQ53_RS03325 PF00342 Phosphoglucose isomerase CKQ53_RS03330 PF01842 ACT domain CKQ53_RS03330 PF00696 Amino acid kinase family CKQ53_RS03335 PF00939 Sodium:sulfate symporter transmembrane region CKQ53_RS03340 PF04204 Homoserine O-succinyltransferase CKQ53_RS03370 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS03375 PF07369 Protein of unknown function (DUF1488) CKQ53_RS03380 PF08501 Shikimate dehydrogenase substrate binding domain CKQ53_RS03380 PF01488 Shikimate / quinate 5-dehydrogenase CKQ53_RS03380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CKQ53_RS03385 PF01300 Telomere recombination CKQ53_RS03390 PF01396 Topoisomerase DNA binding C4 zinc finger CKQ53_RS03395 PF04361 Protein of unknown function (DUF494) CKQ53_RS03400 PF02481 DNA recombination-mediator protein A CKQ53_RS03400 PF17782 DprA winged helix domain CKQ53_RS03405 PF01327 Polypeptide deformylase CKQ53_RS03410 PF02911 Formyl transferase, C-terminal domain CKQ53_RS03410 PF00551 Formyl transferase CKQ53_RS03415 PF01189 16S rRNA methyltransferase RsmB/F CKQ53_RS03415 PF01029 NusB family CKQ53_RS03425 PF01741 Large-conductance mechanosensitive channel, MscL CKQ53_RS03430 PF03889 Alternative ribosome-rescue factor A CKQ53_RS03435 PF09350 Domain of unknown function (DUF1992) CKQ53_RS03440 PF01196 Ribosomal protein L17 CKQ53_RS03445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CKQ53_RS03445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CKQ53_RS03445 PF01000 RNA polymerase Rpb3/RpoA insert domain CKQ53_RS03450 PF00163 Ribosomal protein S4/S9 N-terminal domain CKQ53_RS03450 PF01479 S4 domain CKQ53_RS03455 PF00411 Ribosomal protein S11 CKQ53_RS03460 PF00416 Ribosomal protein S13/S18 CKQ53_RS03465 PF00444 Ribosomal protein L36 CKQ53_RS03470 PF00344 SecY translocase CKQ53_RS03475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CKQ53_RS03480 PF00327 Ribosomal protein L30p/L7e CKQ53_RS03485 PF00333 Ribosomal protein S5, N-terminal domain CKQ53_RS03485 PF03719 Ribosomal protein S5, C-terminal domain CKQ53_RS03490 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CKQ53_RS03495 PF00347 Ribosomal protein L6 CKQ53_RS03500 PF00410 Ribosomal protein S8 CKQ53_RS03505 PF00253 Ribosomal protein S14p/S29e CKQ53_RS03510 PF00281 Ribosomal protein L5 CKQ53_RS03510 PF00673 ribosomal L5P family C-terminus CKQ53_RS03515 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CKQ53_RS03515 PF00467 KOW motif CKQ53_RS03520 PF00238 Ribosomal protein L14p/L23e CKQ53_RS03525 PF00366 Ribosomal protein S17 CKQ53_RS03530 PF00831 Ribosomal L29 protein CKQ53_RS03535 PF00252 Ribosomal protein L16p/L10e CKQ53_RS03540 PF00189 Ribosomal protein S3, C-terminal domain CKQ53_RS03540 PF07650 KH domain CKQ53_RS03545 PF00237 Ribosomal protein L22p/L17e CKQ53_RS03550 PF00203 Ribosomal protein S19 CKQ53_RS03555 PF03947 Ribosomal Proteins L2, C-terminal domain CKQ53_RS03555 PF00181 Ribosomal Proteins L2, RNA binding domain CKQ53_RS03560 PF00276 Ribosomal protein L23 CKQ53_RS03565 PF00573 Ribosomal protein L4/L1 family CKQ53_RS03570 PF00297 Ribosomal protein L3 CKQ53_RS03575 PF00338 Ribosomal protein S10p/S20e CKQ53_RS03580 PF00210 Ferritin-like domain CKQ53_RS03585 PF04324 BFD-like [2Fe-2S] binding domain CKQ53_RS03590 PF03143 Elongation factor Tu C-terminal domain CKQ53_RS03590 PF03144 Elongation factor Tu domain 2 CKQ53_RS03590 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS03595 PF14492 Elongation Factor G, domain II CKQ53_RS03595 PF00679 Elongation factor G C-terminus CKQ53_RS03595 PF03764 Elongation factor G, domain IV CKQ53_RS03595 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS03595 PF03144 Elongation factor Tu domain 2 CKQ53_RS03600 PF00177 Ribosomal protein S7p/S5e CKQ53_RS03605 PF00164 Ribosomal protein S12/S23 CKQ53_RS03610 PF04077 DsrH like protein CKQ53_RS03615 PF02635 DsrE/DsrF-like family CKQ53_RS03620 PF02635 DsrE/DsrF-like family CKQ53_RS03625 PF08348 YheO-like PAS domain CKQ53_RS03625 PF13309 HTH domain CKQ53_RS03630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CKQ53_RS03630 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CKQ53_RS03635 PF04102 SlyX CKQ53_RS03640 PF12833 Helix-turn-helix domain CKQ53_RS03640 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CKQ53_RS03655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CKQ53_RS03665 PF00999 Sodium/hydrogen exchanger family CKQ53_RS03665 PF02254 TrkA-N domain CKQ53_RS03670 PF02525 Flavodoxin-like fold CKQ53_RS03675 PF12848 ABC transporter CKQ53_RS03675 PF00005 ABC transporter CKQ53_RS03685 PF00561 alpha/beta hydrolase fold CKQ53_RS03690 PF06794 Uncharacterised protein family (UPF0270) CKQ53_RS03695 PF00485 Phosphoribulokinase / Uridine kinase family CKQ53_RS03700 PF02566 OsmC-like protein CKQ53_RS03705 PF13545 Crp-like helix-turn-helix domain CKQ53_RS03705 PF00027 Cyclic nucleotide-binding domain CKQ53_RS03710 PF00202 Aminotransferase class-III CKQ53_RS03715 PF00117 Glutamine amidotransferase class-I CKQ53_RS03720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CKQ53_RS03725 PF00579 tRNA synthetases class I (W and Y) CKQ53_RS03730 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS03735 PF00834 Ribulose-phosphate 3 epimerase family CKQ53_RS03740 PF02086 D12 class N6 adenine-specific DNA methyltransferase CKQ53_RS03745 PF05036 Sporulation related domain CKQ53_RS03745 PF05036 Sporulation related domain CKQ53_RS03750 PF01761 3-dehydroquinate synthase CKQ53_RS03755 PF01202 Shikimate kinase CKQ53_RS03760 PF00263 Bacterial type II and III secretion system protein CKQ53_RS03760 PF03958 Bacterial type II/III secretion system short domain CKQ53_RS03785 PF00912 Transglycosylase CKQ53_RS03785 PF17092 Penicillin-binding protein OB-like domain CKQ53_RS03785 PF00905 Penicillin binding protein transpeptidase domain CKQ53_RS03790 PF00293 NUDIX domain CKQ53_RS03800 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS03805 PF01479 S4 domain CKQ53_RS03810 PF01430 Hsp33 protein CKQ53_RS03815 PF01293 Phosphoenolpyruvate carboxykinase CKQ53_RS03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS03820 PF00672 HAMP domain CKQ53_RS03820 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS03825 PF00072 Response regulator receiver domain CKQ53_RS03825 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS03830 PF03449 Transcription elongation factor, N-terminal CKQ53_RS03830 PF01272 Transcription elongation factor, GreA/GreB, C-term CKQ53_RS03840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS03840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS03840 PF00205 Thiamine pyrophosphate enzyme, central domain CKQ53_RS03845 PF00285 Citrate synthase, C-terminal domain CKQ53_RS03850 PF09371 Tex-like protein N-terminal domain CKQ53_RS03850 PF17674 HHH domain CKQ53_RS03850 PF16921 Tex protein YqgF-like domain CKQ53_RS03850 PF00575 S1 RNA binding domain CKQ53_RS03860 PF00005 ABC transporter CKQ53_RS03870 PF00245 Alkaline phosphatase CKQ53_RS03875 PF00561 alpha/beta hydrolase fold CKQ53_RS03880 PF00156 Phosphoribosyl transferase domain CKQ53_RS03885 PF01521 Iron-sulphur cluster biosynthesis CKQ53_RS03885 PF01106 NifU-like domain CKQ53_RS03895 PF08220 DeoR-like helix-turn-helix domain CKQ53_RS03895 PF00455 DeoR C terminal sensor domain CKQ53_RS03900 PF01694 Rhomboid family CKQ53_RS03900 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CKQ53_RS03905 PF00581 Rhodanese-like domain CKQ53_RS03910 PF01266 FAD dependent oxidoreductase CKQ53_RS03910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CKQ53_RS03915 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKQ53_RS03915 PF02774 Semialdehyde dehydrogenase, dimerisation domain CKQ53_RS03920 PF01914 MarC family integral membrane protein CKQ53_RS03925 PF02447 GntP family permease CKQ53_RS03930 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS03930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CKQ53_RS03935 PF02678 Pirin CKQ53_RS03935 PF17954 Quercetinase C-terminal cupin domain CKQ53_RS03950 PF12146 Serine aminopeptidase, S33 CKQ53_RS03955 PF01810 LysE type translocator CKQ53_RS03960 PF01810 LysE type translocator CKQ53_RS03965 PF00570 HRDC domain CKQ53_RS03965 PF09382 RQC domain CKQ53_RS03965 PF00271 Helicase conserved C-terminal domain CKQ53_RS03965 PF16124 RecQ zinc-binding CKQ53_RS03965 PF00270 DEAD/DEAH box helicase CKQ53_RS03970 PF02253 Phospholipase A1 CKQ53_RS03975 PF00892 EamA-like transporter family CKQ53_RS03980 PF01544 CorA-like Mg2+ transporter protein CKQ53_RS03985 PF00580 UvrD/REP helicase N-terminal domain CKQ53_RS03985 PF13361 UvrD-like helicase C-terminal domain CKQ53_RS03990 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS03995 PF02899 Phage integrase, N-terminal SAM-like domain CKQ53_RS03995 PF00589 Phage integrase family CKQ53_RS04000 PF04340 Protein of unknown function, DUF484 CKQ53_RS04005 PF01678 Diaminopimelate epimerase CKQ53_RS04010 PF13627 Prokaryotic lipoprotein-attachment site CKQ53_RS04015 PF01295 Adenylate cyclase, class-I CKQ53_RS04015 PF12633 Adenylate cyclase NT domain CKQ53_RS04020 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CKQ53_RS04020 PF03900 Porphobilinogen deaminase, C-terminal domain CKQ53_RS04025 PF02602 Uroporphyrinogen-III synthase HemD CKQ53_RS04030 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CKQ53_RS04035 PF07719 Tetratricopeptide repeat CKQ53_RS04035 PF07219 HemY protein N-terminus CKQ53_RS04055 PF05488 PAAR motif CKQ53_RS04055 PF05593 RHS Repeat CKQ53_RS04105 PF04717 Type VI secretion system, phage-baseplate injector CKQ53_RS04110 PF05638 Type VI secretion system effector, Hcp CKQ53_RS04115 PF01546 Peptidase family M20/M25/M40 CKQ53_RS04115 PF07687 Peptidase dimerisation domain CKQ53_RS04120 PF00005 ABC transporter CKQ53_RS04125 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS04130 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS04135 PF00583 Acetyltransferase (GNAT) family CKQ53_RS04140 PF02358 Trehalose-phosphatase CKQ53_RS04145 PF00982 Glycosyltransferase family 20 CKQ53_RS04150 PF00072 Response regulator receiver domain CKQ53_RS04150 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS04155 PF04055 Radical SAM superfamily CKQ53_RS04190 PF00324 Amino acid permease CKQ53_RS04195 PF03808 Glycosyl transferase WecB/TagA/CpsF family CKQ53_RS04200 PF06899 WzyE protein, O-antigen assembly polymerase CKQ53_RS04205 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CKQ53_RS04210 PF01943 Polysaccharide biosynthesis protein CKQ53_RS04215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CKQ53_RS04225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CKQ53_RS04225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CKQ53_RS04225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CKQ53_RS04230 PF02350 UDP-N-acetylglucosamine 2-epimerase CKQ53_RS04235 PF02706 Chain length determinant protein CKQ53_RS04240 PF00953 Glycosyl transferase family 4 CKQ53_RS04245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKQ53_RS04245 PF07497 Rho termination factor, RNA-binding domain CKQ53_RS04245 PF07498 Rho termination factor, N-terminal domain CKQ53_RS04250 PF00085 Thioredoxin CKQ53_RS04255 PF00271 Helicase conserved C-terminal domain CKQ53_RS04255 PF00270 DEAD/DEAH box helicase CKQ53_RS04260 PF02541 Ppx/GppA phosphatase family CKQ53_RS04265 PF00295 Glycosyl hydrolases family 28 CKQ53_RS04270 PF13361 UvrD-like helicase C-terminal domain CKQ53_RS04270 PF00580 UvrD/REP helicase N-terminal domain CKQ53_RS04280 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CKQ53_RS04280 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CKQ53_RS04285 PF03466 LysR substrate binding domain CKQ53_RS04285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS04295 PF00585 C-terminal regulatory domain of Threonine dehydratase CKQ53_RS04295 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS04300 PF00920 Dehydratase family CKQ53_RS04305 PF01063 Amino-transferase class IV CKQ53_RS04315 PF00205 Thiamine pyrophosphate enzyme, central domain CKQ53_RS04315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS04315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS04320 PF08046 IlvGEDA operon leader peptide CKQ53_RS04325 PF13335 Magnesium chelatase, subunit ChlI C-terminal CKQ53_RS04325 PF01078 Magnesium chelatase, subunit ChlI CKQ53_RS04330 PF04219 Protein of unknown function, DUF CKQ53_RS04335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS04335 PF03466 LysR substrate binding domain CKQ53_RS04375 PF01177 Asp/Glu/Hydantoin racemase CKQ53_RS04380 PF05958 tRNA (Uracil-5-)-methyltransferase CKQ53_RS04385 PF07226 Protein of unknown function (DUF1422) CKQ53_RS04390 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS04395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS04395 PF03466 LysR substrate binding domain CKQ53_RS04400 PF02219 Methylenetetrahydrofolate reductase CKQ53_RS04405 PF03447 Homoserine dehydrogenase, NAD binding domain CKQ53_RS04405 PF00696 Amino acid kinase family CKQ53_RS04405 PF00742 Homoserine dehydrogenase CKQ53_RS04410 PF01053 Cys/Met metabolism PLP-dependent enzyme CKQ53_RS04415 PF01340 Met Apo-repressor, MetJ CKQ53_RS04420 PF01197 Ribosomal protein L31 CKQ53_RS04425 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CKQ53_RS04425 PF00271 Helicase conserved C-terminal domain CKQ53_RS04425 PF17764 3′ DNA-binding domain (3′BD) CKQ53_RS04425 PF00270 DEAD/DEAH box helicase CKQ53_RS04425 PF18074 Primosomal protein N C-terminal domain CKQ53_RS04430 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS04435 PF05036 Sporulation related domain CKQ53_RS04440 PF00227 Proteasome subunit CKQ53_RS04445 PF07724 AAA domain (Cdc48 subfamily) CKQ53_RS04445 PF10431 C-terminal, D2-small domain, of ClpB protein CKQ53_RS04445 PF00004 ATPase family associated with various cellular activities (AAA) CKQ53_RS04450 PF01040 UbiA prenyltransferase family CKQ53_RS04455 PF03737 Aldolase/RraA CKQ53_RS04460 PF06005 Cell division protein ZapB CKQ53_RS04465 PF00230 Major intrinsic protein CKQ53_RS04475 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CKQ53_RS04480 PF00175 Oxidoreductase NAD-binding domain CKQ53_RS04480 PF00970 Oxidoreductase FAD-binding domain CKQ53_RS04485 PF05656 Protein of unknown function (DUF805) CKQ53_RS04490 PF07305 Protein of unknown function (DUF1454) CKQ53_RS04495 PF00121 Triosephosphate isomerase CKQ53_RS04500 PF04371 Porphyromonas-type peptidyl-arginine deiminase CKQ53_RS04505 PF00795 Carbon-nitrogen hydrolase CKQ53_RS04510 PF00365 Phosphofructokinase CKQ53_RS04515 PF16916 Dimerisation domain of Zinc Transporter CKQ53_RS04515 PF01545 Cation efflux family CKQ53_RS04525 PF00293 NUDIX domain CKQ53_RS04555 PF07813 LTXXQ motif family protein CKQ53_RS04560 PF00072 Response regulator receiver domain CKQ53_RS04560 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS04565 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS04565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS04565 PF00672 HAMP domain CKQ53_RS04565 PF16527 Two-component sensor protein CpxA, periplasmic domain CKQ53_RS04580 PF00588 SpoU rRNA Methylase family CKQ53_RS04590 PF03547 Membrane transport protein CKQ53_RS04595 PF03009 Glycerophosphoryl diester phosphodiesterase family CKQ53_RS04600 PF17912 MalK OB fold domain CKQ53_RS04600 PF00005 ABC transporter CKQ53_RS04605 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS04610 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS04615 PF13416 Bacterial extracellular solute-binding protein CKQ53_RS04620 PF00672 HAMP domain CKQ53_RS04620 PF02203 Tar ligand binding domain homologue CKQ53_RS04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS04625 PF00155 Aminotransferase class I and II CKQ53_RS04630 PF00005 ABC transporter CKQ53_RS04635 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKQ53_RS04635 PF00005 ABC transporter CKQ53_RS04640 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS04640 PF11862 Domain of unknown function (DUF3382) CKQ53_RS04645 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS04650 PF13458 Periplasmic binding protein CKQ53_RS04655 PF12568 Acetyltransferase (GNAT) domain, PanZ CKQ53_RS04660 PF04545 Sigma-70, region 4 CKQ53_RS04660 PF04542 Sigma-70 region 2 CKQ53_RS04660 PF00140 Sigma-70 factor, region 1.2 CKQ53_RS04665 PF02687 FtsX-like permease family CKQ53_RS04665 PF18075 FtsX extracellular domain CKQ53_RS04670 PF00005 ABC transporter CKQ53_RS04675 PF02881 SRP54-type protein, helical bundle domain CKQ53_RS04675 PF00448 SRP54-type protein, GTPase domain CKQ53_RS04685 PF06611 Protein of unknown function (DUF1145) CKQ53_RS04695 PF07947 YhhN family CKQ53_RS04700 PF01206 Sulfurtransferase TusA CKQ53_RS04705 PF02592 Putative vitamin uptake transporter CKQ53_RS04710 PF08786 DcrB CKQ53_RS04715 PF03631 Virulence factor BrkB CKQ53_RS04720 PF01361 Tautomerase enzyme CKQ53_RS04725 PF00675 Insulinase (Peptidase family M16) CKQ53_RS04725 PF05193 Peptidase M16 inactive domain CKQ53_RS04730 PF00375 Sodium:dicarboxylate symporter family CKQ53_RS04735 PF00672 HAMP domain CKQ53_RS04735 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS04735 PF17154 Gammaproteobacterial periplasmic sensor domain CKQ53_RS04735 PF00563 EAL domain CKQ53_RS04740 PF01270 Glycosyl hydrolases family 8 CKQ53_RS04750 PF13181 Tetratricopeptide repeat CKQ53_RS04750 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CKQ53_RS04755 PF03170 Bacterial cellulose synthase subunit CKQ53_RS04760 PF00535 Glycosyl transferase family 2 CKQ53_RS04760 PF03170 Bacterial cellulose synthase subunit CKQ53_RS04760 PF07238 PilZ domain CKQ53_RS04765 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CKQ53_RS04775 PF00005 ABC transporter CKQ53_RS04775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS04780 PF00005 ABC transporter CKQ53_RS04780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS04785 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS04785 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS04790 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS04795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS04800 PF03390 2-hydroxycarboxylate transporter family CKQ53_RS04815 PF00072 Response regulator receiver domain CKQ53_RS04820 PF17203 Single cache domain 3 CKQ53_RS04820 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CKQ53_RS04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS04820 PF00989 PAS fold CKQ53_RS04825 PF00939 Sodium:sulfate symporter transmembrane region CKQ53_RS04830 PF00011 Hsp20/alpha crystallin family CKQ53_RS04835 PF00011 Hsp20/alpha crystallin family CKQ53_RS04840 PF07119 Protein of unknown function (DUF1375) CKQ53_RS04845 PF12566 Protein of unknown function (DUF3748) CKQ53_RS04845 PF07676 WD40-like Beta Propeller Repeat CKQ53_RS04850 PF07338 Protein of unknown function (DUF1471) CKQ53_RS04860 PF00582 Universal stress protein family CKQ53_RS04865 PF10625 Universal stress protein B (UspB) CKQ53_RS04870 PF01384 Phosphate transporter family CKQ53_RS04890 PF00884 Sulfatase CKQ53_RS04890 PF08019 Phosphoethanolamine transferase EptA/EptB CKQ53_RS04895 PF03120 NAD-dependent DNA ligase OB-fold domain CKQ53_RS04895 PF01653 NAD-dependent DNA ligase adenylation domain CKQ53_RS04905 PF00625 Guanylate kinase CKQ53_RS04910 PF01192 RNA polymerase Rpb6 CKQ53_RS04915 PF13291 ACT domain CKQ53_RS04915 PF02824 TGS domain CKQ53_RS04915 PF04607 Region found in RelA / SpoT proteins CKQ53_RS04920 PF00588 SpoU rRNA Methylase family CKQ53_RS04920 PF12105 SpoU, rRNA methylase, C-terminal CKQ53_RS04925 PF00271 Helicase conserved C-terminal domain CKQ53_RS04925 PF00270 DEAD/DEAH box helicase CKQ53_RS04925 PF17191 RecG wedge domain CKQ53_RS04930 PF00860 Permease family CKQ53_RS04935 PF05170 AsmA family CKQ53_RS04940 PF00583 Acetyltransferase (GNAT) family CKQ53_RS04940 PF09500 Putative thioesterase (yiiD_Cterm) CKQ53_RS04945 PF02580 D-Tyr-tRNA(Tyr) deacylase CKQ53_RS04950 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS04955 PF03144 Elongation factor Tu domain 2 CKQ53_RS04955 PF00679 Elongation factor G C-terminus CKQ53_RS04955 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS04960 PF03951 Glutamine synthetase, beta-Grasp domain CKQ53_RS04960 PF00120 Glutamine synthetase, catalytic domain CKQ53_RS04965 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS04965 PF00989 PAS fold CKQ53_RS04965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS04970 PF00158 Sigma-54 interaction domain CKQ53_RS04970 PF00072 Response regulator receiver domain CKQ53_RS04970 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS04975 PF04055 Radical SAM superfamily CKQ53_RS04975 PF06969 HemN C-terminal domain CKQ53_RS04985 PF04220 Der GTPase activator (YihI) CKQ53_RS04990 PF01926 50S ribosome-binding GTPase CKQ53_RS04995 PF00476 DNA polymerase family A CKQ53_RS04995 PF01367 5'-3' exonuclease, C-terminal SAM fold CKQ53_RS04995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CKQ53_RS04995 PF01612 3'-5' exonuclease CKQ53_RS05010 PF06288 Protein of unknown function (DUF1040) CKQ53_RS05015 PF12804 MobA-like NTP transferase domain CKQ53_RS05020 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CKQ53_RS05050 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS05055 PF00294 pfkB family carbohydrate kinase CKQ53_RS05060 PF13407 Periplasmic binding protein domain CKQ53_RS05065 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS05070 PF00005 ABC transporter CKQ53_RS05075 PF05025 RbsD / FucU transport protein family CKQ53_RS05080 PF04076 Bacterial OB fold (BOF) protein CKQ53_RS05085 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS05085 PF00072 Response regulator receiver domain CKQ53_RS05090 PF08521 Two-component sensor kinase N-terminal CKQ53_RS05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS05090 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS05095 PF02705 K+ potassium transporter CKQ53_RS05100 PF07728 AAA domain (dynein-related subfamily) CKQ53_RS05100 PF17868 AAA lid domain CKQ53_RS05100 PF12592 Protein of unknown function (DUF3763) CKQ53_RS05105 PF05762 VWA domain containing CoxE-like protein CKQ53_RS05110 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS05115 PF00258 Flavodoxin CKQ53_RS05120 PF13932 GidA associated domain CKQ53_RS05120 PF01134 Glucose inhibited division protein A CKQ53_RS05125 PF02527 rRNA small subunit methyltransferase G CKQ53_RS05130 PF03899 ATP synthase I chain CKQ53_RS05135 PF00119 ATP synthase A chain CKQ53_RS05140 PF00137 ATP synthase subunit C CKQ53_RS05145 PF00430 ATP synthase B/B' CF(0) CKQ53_RS05150 PF00213 ATP synthase delta (OSCP) subunit CKQ53_RS05155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKQ53_RS05155 PF00306 ATP synthase alpha/beta chain, C terminal domain CKQ53_RS05155 PF02874 ATP synthase alpha/beta family, beta-barrel domain CKQ53_RS05160 PF00231 ATP synthase CKQ53_RS05165 PF02874 ATP synthase alpha/beta family, beta-barrel domain CKQ53_RS05165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKQ53_RS05170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CKQ53_RS05170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CKQ53_RS05175 PF12804 MobA-like NTP transferase domain CKQ53_RS05175 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS05180 PF01380 SIS domain CKQ53_RS05185 PF12849 PBP superfamily domain CKQ53_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05200 PF00005 ABC transporter CKQ53_RS05205 PF01895 PhoU domain CKQ53_RS05210 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS05215 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05220 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05225 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS05230 PF00860 Permease family CKQ53_RS05240 PF12800 4Fe-4S binding domain CKQ53_RS05240 PF13247 4Fe-4S dicluster domain CKQ53_RS05245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CKQ53_RS05245 PF13247 4Fe-4S dicluster domain CKQ53_RS05245 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS05250 PF04632 Fusaric acid resistance protein family CKQ53_RS05255 PF00892 EamA-like transporter family CKQ53_RS05270 PF02626 Carboxyltransferase domain, subdomain A and B CKQ53_RS05275 PF00155 Aminotransferase class I and II CKQ53_RS05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS05280 PF03466 LysR substrate binding domain CKQ53_RS05290 PF03746 LamB/YcsF family CKQ53_RS05295 PF00106 short chain dehydrogenase CKQ53_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05310 PF00005 ABC transporter CKQ53_RS05315 PF02669 K+-transporting ATPase, c chain CKQ53_RS05325 PF03814 Potassium-transporting ATPase A subunit CKQ53_RS05330 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CKQ53_RS05335 PF01070 FMN-dependent dehydrogenase CKQ53_RS05350 PF00348 Polyprenyl synthetase CKQ53_RS05355 PF00067 Cytochrome P450 CKQ53_RS05365 PF00067 Cytochrome P450 CKQ53_RS05370 PF00067 Cytochrome P450 CKQ53_RS05375 PF00067 Cytochrome P450 CKQ53_RS05380 PF10396 GTP-binding protein TrmE N-terminus CKQ53_RS05380 PF01926 50S ribosome-binding GTPase CKQ53_RS05380 PF12631 MnmE helical domain CKQ53_RS05385 PF02096 60Kd inner membrane protein CKQ53_RS05385 PF14849 YidC periplasmic domain CKQ53_RS05390 PF01809 Putative membrane protein insertion efficiency factor CKQ53_RS05395 PF00825 Ribonuclease P CKQ53_RS05400 PF00468 Ribosomal protein L34 CKQ53_RS05410 PF00308 Bacterial dnaA protein CKQ53_RS05410 PF08299 Bacterial dnaA protein helix-turn-helix CKQ53_RS05410 PF11638 DnaA N-terminal domain CKQ53_RS05415 PF00712 DNA polymerase III beta subunit, N-terminal domain CKQ53_RS05415 PF02768 DNA polymerase III beta subunit, C-terminal domain CKQ53_RS05415 PF02767 DNA polymerase III beta subunit, central domain CKQ53_RS05420 PF02463 RecF/RecN/SMC N terminal domain CKQ53_RS05425 PF18053 DNA gyrase B subunit insert domain CKQ53_RS05425 PF00986 DNA gyrase B subunit, carboxyl terminus CKQ53_RS05425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS05425 PF01751 Toprim domain CKQ53_RS05425 PF00204 DNA gyrase B CKQ53_RS05435 PF04445 Putative SAM-dependent methyltransferase CKQ53_RS05440 PF01432 Peptidase family M3 CKQ53_RS05450 PF00251 Glycosyl hydrolases family 32 N-terminal domain CKQ53_RS05450 PF08244 Glycosyl hydrolases family 32 C terminal CKQ53_RS05455 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CKQ53_RS05460 PF12706 Beta-lactamase superfamily domain CKQ53_RS05465 PF06956 Regulator of RNA terminal phosphate cyclase CKQ53_RS05465 PF00158 Sigma-54 interaction domain CKQ53_RS05475 PF10127 RNA repair pathway DNA polymerase beta family CKQ53_RS05480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CKQ53_RS05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS05490 PF03611 PTS system sugar-specific permease component CKQ53_RS05500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKQ53_RS05505 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS05510 PF00266 Aminotransferase class-V CKQ53_RS05515 PF02685 Glucokinase CKQ53_RS05520 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS05520 PF00155 Aminotransferase class I and II CKQ53_RS05525 PF00194 Eukaryotic-type carbonic anhydrase CKQ53_RS05530 PF10881 Protein of unknown function (DUF2726) CKQ53_RS05535 PF00106 short chain dehydrogenase CKQ53_RS05540 PF00202 Aminotransferase class-III CKQ53_RS05545 PF00005 ABC transporter CKQ53_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05555 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05560 PF09084 NMT1/THI5 like CKQ53_RS05565 PF08362 YcdC-like protein, C-terminal region CKQ53_RS05565 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS05570 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS05570 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CKQ53_RS05575 PF01180 Dihydroorotate dehydrogenase CKQ53_RS05580 PF01979 Amidohydrolase family CKQ53_RS05585 PF01546 Peptidase family M20/M25/M40 CKQ53_RS05585 PF07687 Peptidase dimerisation domain CKQ53_RS05590 PF00155 Aminotransferase class I and II CKQ53_RS05600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS05600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKQ53_RS05605 PF07702 UTRA domain CKQ53_RS05605 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS05610 PF03747 ADP-ribosylglycohydrolase CKQ53_RS05615 PF03825 Nucleoside H+ symporter CKQ53_RS05620 PF03352 Methyladenine glycosylase CKQ53_RS05625 PF01925 Sulfite exporter TauE/SafE CKQ53_RS05630 PF02091 Glycyl-tRNA synthetase alpha subunit CKQ53_RS05635 PF02092 Glycyl-tRNA synthetase beta subunit CKQ53_RS05635 PF05746 DALR anticodon binding domain CKQ53_RS05640 PF11254 Protein of unknown function (DUF3053) CKQ53_RS05645 PF02203 Tar ligand binding domain homologue CKQ53_RS05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS05645 PF00672 HAMP domain CKQ53_RS05650 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CKQ53_RS05650 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CKQ53_RS05655 PF02634 FdhD/NarQ family CKQ53_RS05660 PF00171 Aldehyde dehydrogenase family CKQ53_RS05665 PF01757 Acyltransferase family CKQ53_RS05670 PF12833 Helix-turn-helix domain CKQ53_RS05670 PF01965 DJ-1/PfpI family CKQ53_RS05680 PF00764 Arginosuccinate synthase CKQ53_RS05705 PF00563 EAL domain CKQ53_RS05705 PF12792 CSS motif domain associated with EAL CKQ53_RS05710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CKQ53_RS05715 PF00596 Class II Aldolase and Adducin N-terminal domain CKQ53_RS05720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKQ53_RS05725 PF03611 PTS system sugar-specific permease component CKQ53_RS05735 PF01261 Xylose isomerase-like TIM barrel CKQ53_RS05740 PF08220 DeoR-like helix-turn-helix domain CKQ53_RS05740 PF00455 DeoR C terminal sensor domain CKQ53_RS05750 PF07702 UTRA domain CKQ53_RS05750 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS05755 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS05760 PF01380 SIS domain CKQ53_RS05765 PF00294 pfkB family carbohydrate kinase CKQ53_RS05785 PF00893 Small Multidrug Resistance protein CKQ53_RS05800 PF03755 YicC-like family, N-terminal region CKQ53_RS05800 PF08340 Domain of unknown function (DUF1732) CKQ53_RS05805 PF03466 LysR substrate binding domain CKQ53_RS05805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS05810 PF01112 Asparaginase CKQ53_RS05820 PF03576 Peptidase family S58 CKQ53_RS05825 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS05825 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS05835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS05840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS05840 PF00005 ABC transporter CKQ53_RS05845 PF13378 Enolase C-terminal domain-like CKQ53_RS05845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKQ53_RS05860 PF02656 Domain of unknown function (DUF202) CKQ53_RS05865 PF01138 3' exoribonuclease family, domain 1 CKQ53_RS05865 PF03725 3' exoribonuclease family, domain 2 CKQ53_RS05870 PF00156 Phosphoribosyl transferase domain CKQ53_RS05875 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS05880 PF00692 dUTPase CKQ53_RS05885 PF04127 DNA / pantothenate metabolism flavoprotein CKQ53_RS05885 PF02441 Flavoprotein CKQ53_RS05890 PF04002 RadC-like JAB domain CKQ53_RS05895 PF00830 Ribosomal L28 family CKQ53_RS05900 PF00471 Ribosomal protein L33 CKQ53_RS05905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CKQ53_RS05905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CKQ53_RS05905 PF06827 Zinc finger found in FPG and IleRS CKQ53_RS05910 PF01467 Cytidylyltransferase-like CKQ53_RS05915 PF00535 Glycosyl transferase family 2 CKQ53_RS05920 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CKQ53_RS05925 PF00534 Glycosyl transferases group 1 CKQ53_RS05925 PF13439 Glycosyltransferase Family 4 CKQ53_RS05930 PF13439 Glycosyltransferase Family 4 CKQ53_RS05930 PF00534 Glycosyl transferases group 1 CKQ53_RS05935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CKQ53_RS05945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CKQ53_RS05960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CKQ53_RS05965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CKQ53_RS05970 PF01370 NAD dependent epimerase/dehydratase family CKQ53_RS05975 PF04748 Divergent polysaccharide deacetylase CKQ53_RS05980 PF01551 Peptidase family M23 CKQ53_RS05985 PF00581 Rhodanese-like domain CKQ53_RS05990 PF02556 Preprotein translocase subunit SecB CKQ53_RS05995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CKQ53_RS05995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CKQ53_RS06000 PF06426 Serine acetyltransferase, N-terminal CKQ53_RS06000 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS06005 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CKQ53_RS06010 PF00892 EamA-like transporter family CKQ53_RS06015 PF03466 LysR substrate binding domain CKQ53_RS06015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS06020 PF01717 Cobalamin-independent synthase, Catalytic domain CKQ53_RS06020 PF08267 Cobalamin-independent synthase, N-terminal domain CKQ53_RS06050 PF01048 Phosphorylase superfamily CKQ53_RS06060 PF00311 Phosphoenolpyruvate carboxylase CKQ53_RS06065 PF01546 Peptidase family M20/M25/M40 CKQ53_RS06065 PF07687 Peptidase dimerisation domain CKQ53_RS06070 PF02774 Semialdehyde dehydrogenase, dimerisation domain CKQ53_RS06070 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKQ53_RS06075 PF00696 Amino acid kinase family CKQ53_RS06080 PF14698 Argininosuccinate lyase C-terminal CKQ53_RS06080 PF00206 Lyase CKQ53_RS06085 PF02646 RmuC family CKQ53_RS06090 PF01209 ubiE/COQ5 methyltransferase family CKQ53_RS06095 PF02036 SCP-2 sterol transfer family CKQ53_RS06100 PF03109 ABC1 family CKQ53_RS06105 PF02416 mttA/Hcf106 family CKQ53_RS06115 PF00902 Sec-independent protein translocase protein (TatC) CKQ53_RS06120 PF01026 TatD related DNase CKQ53_RS06125 PF00490 Delta-aminolevulinic acid dehydratase CKQ53_RS06130 PF02357 Transcription termination factor nusG CKQ53_RS06135 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CKQ53_RS06140 PF00970 Oxidoreductase FAD-binding domain CKQ53_RS06140 PF00175 Oxidoreductase NAD-binding domain CKQ53_RS06145 PF00557 Metallopeptidase family M24 CKQ53_RS06150 PF09186 Domain of unknown function (DUF1949) CKQ53_RS06150 PF01205 Uncharacterized protein family UPF0029 CKQ53_RS06155 PF02386 Cation transport protein CKQ53_RS06160 PF12724 Flavodoxin domain CKQ53_RS06190 PF01565 FAD binding domain CKQ53_RS06190 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CKQ53_RS06195 PF02237 Biotin protein ligase C terminal domain CKQ53_RS06195 PF03099 Biotin/lipoate A/B protein ligase family CKQ53_RS06195 PF08279 HTH domain CKQ53_RS06200 PF00485 Phosphoribulokinase / Uridine kinase family CKQ53_RS06205 PF13673 Acetyltransferase (GNAT) domain CKQ53_RS06230 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS06230 PF03144 Elongation factor Tu domain 2 CKQ53_RS06230 PF03143 Elongation factor Tu C-terminal domain CKQ53_RS06235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CKQ53_RS06240 PF00467 KOW motif CKQ53_RS06240 PF02357 Transcription termination factor nusG CKQ53_RS06245 PF00298 Ribosomal protein L11, RNA binding domain CKQ53_RS06245 PF03946 Ribosomal protein L11, N-terminal domain CKQ53_RS06250 PF00687 Ribosomal protein L1p/L10e family CKQ53_RS06255 PF00466 Ribosomal protein L10 CKQ53_RS06260 PF00542 Ribosomal protein L7/L12 C-terminal domain CKQ53_RS06260 PF16320 Ribosomal protein L7/L12 dimerisation domain CKQ53_RS06265 PF04561 RNA polymerase Rpb2, domain 2 CKQ53_RS06265 PF04563 RNA polymerase beta subunit CKQ53_RS06265 PF10385 RNA polymerase beta subunit external 1 domain CKQ53_RS06265 PF00562 RNA polymerase Rpb2, domain 6 CKQ53_RS06265 PF04560 RNA polymerase Rpb2, domain 7 CKQ53_RS06265 PF04565 RNA polymerase Rpb2, domain 3 CKQ53_RS06270 PF04998 RNA polymerase Rpb1, domain 5 CKQ53_RS06270 PF00623 RNA polymerase Rpb1, domain 2 CKQ53_RS06270 PF05000 RNA polymerase Rpb1, domain 4 CKQ53_RS06270 PF04997 RNA polymerase Rpb1, domain 1 CKQ53_RS06270 PF04983 RNA polymerase Rpb1, domain 3 CKQ53_RS06280 PF06568 Domain of unknown function (DUF1127) CKQ53_RS06285 PF00155 Aminotransferase class I and II CKQ53_RS06285 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS06290 PF06968 Biotin and Thiamin Synthesis associated domain CKQ53_RS06290 PF04055 Radical SAM superfamily CKQ53_RS06295 PF05690 Thiazole biosynthesis protein ThiG CKQ53_RS06300 PF02597 ThiS family CKQ53_RS06305 PF00899 ThiF family CKQ53_RS06310 PF02581 Thiamine monophosphate synthase CKQ53_RS06315 PF13667 ThiC-associated domain CKQ53_RS06315 PF01964 Radical SAM ThiC family CKQ53_RS06320 PF00293 NUDIX domain CKQ53_RS06320 PF09297 NADH pyrophosphatase zinc ribbon domain CKQ53_RS06325 PF01208 Uroporphyrinogen decarboxylase (URO-D) CKQ53_RS06330 PF04493 Endonuclease V CKQ53_RS06335 PF04222 Protein of unknown function (DUF416) CKQ53_RS06340 PF00216 Bacterial DNA-binding protein CKQ53_RS06345 PF07356 Protein of unknown function (DUF1481) CKQ53_RS06355 PF01808 AICARFT/IMPCHase bienzyme CKQ53_RS06355 PF02142 MGS-like domain CKQ53_RS06390 PF00005 ABC transporter CKQ53_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS06405 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS06415 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS06420 PF01717 Cobalamin-independent synthase, Catalytic domain CKQ53_RS06435 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS06440 PF01207 Dihydrouridine synthase (Dus) CKQ53_RS06455 PF00474 Sodium:solute symporter family CKQ53_RS06460 PF06196 Protein of unknown function (DUF997) CKQ53_RS06465 PF02785 Biotin carboxylase C-terminal domain CKQ53_RS06465 PF00289 Biotin carboxylase, N-terminal domain CKQ53_RS06465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CKQ53_RS06470 PF00364 Biotin-requiring enzyme CKQ53_RS06475 PF01220 Dehydroquinase class II CKQ53_RS06480 PF01794 Ferric reductase like transmembrane component CKQ53_RS06490 PF00107 Zinc-binding dehydrogenase CKQ53_RS06490 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS06495 PF17157 Gammaproteobacterial periplasmic sensor domain CKQ53_RS06495 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS06495 PF00563 EAL domain CKQ53_RS06505 PF04085 rod shape-determining protein MreC CKQ53_RS06510 PF04093 rod shape-determining protein MreD CKQ53_RS06515 PF02545 Maf-like protein CKQ53_RS06520 PF10150 Ribonuclease E/G family CKQ53_RS06520 PF00575 S1 RNA binding domain CKQ53_RS06525 PF13116 Protein of unknown function CKQ53_RS06525 PF13502 AsmA-like C-terminal region CKQ53_RS06530 PF01523 Putative modulator of DNA gyrase CKQ53_RS06535 PF03466 LysR substrate binding domain CKQ53_RS06535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS06540 PF07869 Protein of unknown function (DUF1656) CKQ53_RS06545 PF13533 Biotin-lipoyl like CKQ53_RS06550 PF04632 Fusaric acid resistance protein family CKQ53_RS06555 PF01810 LysE type translocator CKQ53_RS06560 PF04751 Protein of unknown function (DUF615) CKQ53_RS06565 PF01523 Putative modulator of DNA gyrase CKQ53_RS06570 PF12706 Beta-lactamase superfamily domain CKQ53_RS06580 PF07969 Amidohydrolase family CKQ53_RS06585 PF00005 ABC transporter CKQ53_RS06590 PF00005 ABC transporter CKQ53_RS06595 PF06007 Phosphonate metabolism protein PhnJ CKQ53_RS06600 PF05861 Bacterial phosphonate metabolism protein (PhnI) CKQ53_RS06605 PF05845 Bacterial phosphonate metabolism protein (PhnH) CKQ53_RS06610 PF06754 Phosphonate metabolism protein PhnG CKQ53_RS06620 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS06620 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS06630 PF00381 PTS HPr component phosphorylation site CKQ53_RS06635 PF03668 P-loop ATPase protein family CKQ53_RS06640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKQ53_RS06645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CKQ53_RS06650 PF00309 Sigma-54 factor, Activator interacting domain (AID) CKQ53_RS06650 PF04963 Sigma-54 factor, core binding domain CKQ53_RS06650 PF04552 Sigma-54, DNA binding domain CKQ53_RS06655 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKQ53_RS06655 PF00005 ABC transporter CKQ53_RS06660 PF03968 OstA-like protein CKQ53_RS06665 PF06835 Lipopolysaccharide-assembly, LptC-related CKQ53_RS06675 PF00571 CBS domain CKQ53_RS06675 PF01380 SIS domain CKQ53_RS06680 PF01699 Sodium/calcium exchanger protein CKQ53_RS06685 PF00005 ABC transporter CKQ53_RS06690 PF02405 Permease MlaE CKQ53_RS06695 PF02470 MlaD protein CKQ53_RS06700 PF05494 MlaC protein CKQ53_RS06705 PF13466 STAS domain CKQ53_RS06710 PF01722 BolA-like protein CKQ53_RS06715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CKQ53_RS06720 PF13180 PDZ domain CKQ53_RS06725 PF00595 PDZ domain CKQ53_RS06725 PF13180 PDZ domain CKQ53_RS06730 PF06295 Protein of unknown function (DUF1043) CKQ53_RS06735 PF03969 AFG1-like ATPase CKQ53_RS06745 PF00572 Ribosomal protein L13 CKQ53_RS06750 PF00380 Ribosomal protein S9/S16 CKQ53_RS06755 PF02798 Glutathione S-transferase, N-terminal domain CKQ53_RS06755 PF00043 Glutathione S-transferase, C-terminal domain CKQ53_RS06760 PF04386 Stringent starvation protein B CKQ53_RS06770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CKQ53_RS06770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS06775 PF01493 GXGXG motif CKQ53_RS06775 PF00310 Glutamine amidotransferases class-II CKQ53_RS06775 PF01645 Conserved region in glutamate synthase CKQ53_RS06775 PF04898 Glutamate synthase central domain CKQ53_RS06780 PF16199 Radical_SAM C-terminal domain CKQ53_RS06780 PF04055 Radical SAM superfamily CKQ53_RS06785 PF00989 PAS fold CKQ53_RS06785 PF18415 Histidine kinase receptor ArcB trans-membrane domain CKQ53_RS06785 PF00072 Response regulator receiver domain CKQ53_RS06785 PF01627 Hpt domain CKQ53_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS06785 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS06795 PF00912 Transglycosylase CKQ53_RS06800 PF04972 BON domain CKQ53_RS06805 PF13580 SIS domain CKQ53_RS06810 PF02021 Uncharacterised protein family UPF0102 CKQ53_RS06815 PF04348 LppC putative lipoprotein CKQ53_RS06820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CKQ53_RS06830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CKQ53_RS06840 PF03738 Glutathionylspermidine synthase preATP-grasp CKQ53_RS06845 PF06693 Protein of unknown function (DUF1190) CKQ53_RS06850 PF02321 Outer membrane efflux protein CKQ53_RS06855 PF00293 NUDIX domain CKQ53_RS06860 PF06853 Protein of unknown function (DUF1249) CKQ53_RS06865 PF00149 Calcineurin-like phosphoesterase CKQ53_RS06870 PF05728 Uncharacterised protein family (UPF0227) CKQ53_RS06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS06880 PF03466 LysR substrate binding domain CKQ53_RS06885 PF02525 Flavodoxin-like fold CKQ53_RS06890 PF03989 DNA gyrase C-terminal domain, beta-propeller CKQ53_RS06890 PF00521 DNA gyrase/topoisomerase IV, subunit A CKQ53_RS06895 PF01553 Acyltransferase CKQ53_RS06900 PF07731 Multicopper oxidase CKQ53_RS06900 PF07732 Multicopper oxidase CKQ53_RS06905 PF00294 pfkB family carbohydrate kinase CKQ53_RS06915 PF03747 ADP-ribosylglycohydrolase CKQ53_RS06920 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS06920 PF07729 FCD domain CKQ53_RS06925 PF00248 Aldo/keto reductase family CKQ53_RS06930 PF00465 Iron-containing alcohol dehydrogenase CKQ53_RS06935 PF00881 Nitroreductase family CKQ53_RS06940 PF06719 AraC-type transcriptional regulator N-terminus CKQ53_RS06940 PF12833 Helix-turn-helix domain CKQ53_RS06945 PF09335 SNARE associated Golgi protein CKQ53_RS06950 PF01053 Cys/Met metabolism PLP-dependent enzyme CKQ53_RS06955 PF01618 MotA/TolQ/ExbB proton channel family CKQ53_RS06960 PF02472 Biopolymer transport protein ExbD/TolR CKQ53_RS06965 PF13407 Periplasmic binding protein domain CKQ53_RS06965 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS06970 PF08244 Glycosyl hydrolases family 32 C terminal CKQ53_RS06970 PF00251 Glycosyl hydrolases family 32 N-terminal domain CKQ53_RS06975 PF02378 Phosphotransferase system, EIIC CKQ53_RS06975 PF00367 phosphotransferase system, EIIB CKQ53_RS06980 PF02264 LamB porin CKQ53_RS06980 PF11471 Maltoporin periplasmic N-terminal extension CKQ53_RS06985 PF00294 pfkB family carbohydrate kinase CKQ53_RS07000 PF13597 Anaerobic ribonucleoside-triphosphate reductase CKQ53_RS07000 PF03477 ATP cone domain CKQ53_RS07015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS07020 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS07025 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS07030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS07030 PF00005 ABC transporter CKQ53_RS07035 PF01042 Endoribonuclease L-PSP CKQ53_RS07040 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CKQ53_RS07040 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CKQ53_RS07045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CKQ53_RS07045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CKQ53_RS07050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CKQ53_RS07050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CKQ53_RS07055 PF06877 Regulator of ribonuclease activity B CKQ53_RS07060 PF00583 Acetyltransferase (GNAT) family CKQ53_RS07065 PF10458 Valyl tRNA synthetase tRNA binding arm CKQ53_RS07065 PF00133 tRNA synthetases class I (I, L, M and V) CKQ53_RS07065 PF08264 Anticodon-binding domain of tRNA CKQ53_RS07070 PF04364 DNA polymerase III chi subunit, HolC CKQ53_RS07075 PF00883 Cytosol aminopeptidase family, catalytic domain CKQ53_RS07075 PF02789 Cytosol aminopeptidase family, N-terminal domain CKQ53_RS07085 PF03739 Lipopolysaccharide export system permease LptF/LptG CKQ53_RS07090 PF03739 Lipopolysaccharide export system permease LptF/LptG CKQ53_RS07095 PF04286 Protein of unknown function (DUF445) CKQ53_RS07145 PF01555 DNA methylase CKQ53_RS07150 PF01381 Helix-turn-helix CKQ53_RS07180 PF00665 Integrase core domain CKQ53_RS07185 PF01695 IstB-like ATP binding protein CKQ53_RS07220 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CKQ53_RS07230 PF05947 Type VI secretion system, TssF CKQ53_RS07250 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE CKQ53_RS07260 PF17871 AAA lid domain CKQ53_RS07260 PF10431 C-terminal, D2-small domain, of ClpB protein CKQ53_RS07260 PF00004 ATPase family associated with various cellular activities (AAA) CKQ53_RS07260 PF07724 AAA domain (Cdc48 subfamily) CKQ53_RS07265 PF00158 Sigma-54 interaction domain CKQ53_RS07265 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS07280 PF14331 ImcF-related N-terminal domain CKQ53_RS07280 PF06761 Intracellular multiplication and human macrophage-killing CKQ53_RS07280 PF06744 Type VI secretion protein IcmF C-terminal CKQ53_RS07295 PF07759 Protein of unknown function (DUF1615) CKQ53_RS07305 PF00072 Response regulator receiver domain CKQ53_RS07305 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS07310 PF05231 MASE1 CKQ53_RS07310 PF07730 Histidine kinase CKQ53_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS07315 PF07690 Major Facilitator Superfamily CKQ53_RS07320 PF01817 Chorismate mutase type II CKQ53_RS07330 PF01740 STAS domain CKQ53_RS07330 PF00916 Sulfate permease family CKQ53_RS07335 PF00484 Carbonic anhydrase CKQ53_RS07345 PF01494 FAD binding domain CKQ53_RS07350 PF01494 FAD binding domain CKQ53_RS07355 PF05195 Aminopeptidase P, N-terminal domain CKQ53_RS07355 PF00557 Metallopeptidase family M24 CKQ53_RS07360 PF03695 Uncharacterised protein family (UPF0149) CKQ53_RS07365 PF05164 Cell division protein ZapA CKQ53_RS07375 PF01812 5-formyltetrahydrofolate cyclo-ligase family CKQ53_RS07380 PF13521 AAA domain CKQ53_RS07380 PF01381 Helix-turn-helix CKQ53_RS07385 PF18073 Rubredoxin metal binding domain CKQ53_RS07390 PF18429 Domain of unknown function (DUF5609) CKQ53_RS07395 PF10144 Bacterial virulence factor haemolysin CKQ53_RS07400 PF16658 Class II release factor RF3, C-terminal domain CKQ53_RS07400 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS07400 PF03144 Elongation factor Tu domain 2 CKQ53_RS07405 PF04972 BON domain CKQ53_RS07410 PF07043 Protein of unknown function (DUF1328) CKQ53_RS07415 PF01026 TatD related DNase CKQ53_RS07420 PF07670 Nucleoside recognition CKQ53_RS07420 PF07662 Na+ dependent nucleoside transporter C-terminus CKQ53_RS07420 PF01773 Na+ dependent nucleoside transporter N-terminus CKQ53_RS07425 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CKQ53_RS07425 PF01648 4'-phosphopantetheinyl transferase superfamily CKQ53_RS07430 PF00106 short chain dehydrogenase CKQ53_RS07435 PF00005 ABC transporter CKQ53_RS07440 PF12399 Branched-chain amino acid ATP-binding cassette transporter CKQ53_RS07440 PF00005 ABC transporter CKQ53_RS07450 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS07455 PF13458 Periplasmic binding protein CKQ53_RS07460 PF07729 FCD domain CKQ53_RS07460 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS07465 PF14748 Pyrroline-5-carboxylate reductase dimerisation CKQ53_RS07465 PF03807 NADP oxidoreductase coenzyme F420-dependent CKQ53_RS07470 PF10417 C-terminal domain of 1-Cys peroxiredoxin CKQ53_RS07470 PF00578 AhpC/TSA family CKQ53_RS07475 PF13192 Thioredoxin domain CKQ53_RS07475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS07485 PF00561 alpha/beta hydrolase fold CKQ53_RS07490 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CKQ53_RS07490 PF03033 Glycosyltransferase family 28 N-terminal domain CKQ53_RS07495 PF00916 Sulfate permease family CKQ53_RS07495 PF01740 STAS domain CKQ53_RS07510 PF00691 OmpA family CKQ53_RS07510 PF04972 BON domain CKQ53_RS07515 PF00296 Luciferase-like monooxygenase CKQ53_RS07520 PF03547 Membrane transport protein CKQ53_RS07525 PF03466 LysR substrate binding domain CKQ53_RS07525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS07530 PF00795 Carbon-nitrogen hydrolase CKQ53_RS07535 PF01063 Amino-transferase class IV CKQ53_RS07540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS07545 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS07555 PF00005 ABC transporter CKQ53_RS07555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS07560 PF07969 Amidohydrolase family CKQ53_RS07565 PF00282 Pyridoxal-dependent decarboxylase conserved domain CKQ53_RS07570 PF01555 DNA methylase CKQ53_RS07570 PF18273 Type III R-M EcoP15I C-terminal domain CKQ53_RS07605 PF09278 MerR, DNA binding CKQ53_RS07605 PF00376 MerR family regulatory protein CKQ53_RS07635 PF13693 Winged helix-turn-helix DNA-binding CKQ53_RS07650 PF00589 Phage integrase family CKQ53_RS07650 PF13356 Arm DNA-binding domain CKQ53_RS07665 PF11412 Disulphide bond corrector protein DsbC CKQ53_RS07665 PF02683 Cytochrome C biogenesis protein transmembrane region CKQ53_RS07670 PF03091 CutA1 divalent ion tolerance protein CKQ53_RS07675 PF00206 Lyase CKQ53_RS07675 PF10415 Fumarase C C-terminus CKQ53_RS07680 PF04186 FxsA cytoplasmic membrane protein CKQ53_RS07685 PF00166 Chaperonin 10 Kd subunit CKQ53_RS07690 PF00118 TCP-1/cpn60 chaperonin family CKQ53_RS07695 PF04345 Chorismate lyase CKQ53_RS07700 PF01040 UbiA prenyltransferase family CKQ53_RS07705 PF01553 Acyltransferase CKQ53_RS07710 PF01219 Prokaryotic diacylglycerol kinase CKQ53_RS07715 PF00717 Peptidase S24-like CKQ53_RS07715 PF01726 LexA DNA binding domain CKQ53_RS07720 PF01475 Ferric uptake regulator family CKQ53_RS07725 PF17954 Quercetinase C-terminal cupin domain CKQ53_RS07725 PF02678 Pirin CKQ53_RS07730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS07730 PF03466 LysR substrate binding domain CKQ53_RS07735 PF13409 Glutathione S-transferase, N-terminal domain CKQ53_RS07740 PF07681 DoxX CKQ53_RS07750 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CKQ53_RS07755 PF05957 Bacterial protein of unknown function (DUF883) CKQ53_RS07760 PF13721 SecD export protein N-terminal TM region CKQ53_RS07765 PF09335 SNARE associated Golgi protein CKQ53_RS07770 PF03741 Integral membrane protein TerC family CKQ53_RS07775 PF05175 Methyltransferase small domain CKQ53_RS07785 PF07813 LTXXQ motif family protein CKQ53_RS07825 PF01320 Colicin immunity protein / pyocin immunity protein CKQ53_RS07830 PF01320 Colicin immunity protein / pyocin immunity protein CKQ53_RS07860 PF03167 Uracil DNA glycosylase superfamily CKQ53_RS07865 PF06476 Protein of unknown function (DUF1090) CKQ53_RS07870 PF04546 Sigma-70, non-essential region CKQ53_RS07870 PF03979 Sigma-70 factor, region 1.1 CKQ53_RS07870 PF00140 Sigma-70 factor, region 1.2 CKQ53_RS07870 PF04545 Sigma-70, region 4 CKQ53_RS07870 PF04542 Sigma-70 region 2 CKQ53_RS07870 PF04539 Sigma-70 region 3 CKQ53_RS07875 PF08275 DNA primase catalytic core, N-terminal domain CKQ53_RS07875 PF10410 DnaB-helicase binding domain of primase CKQ53_RS07875 PF08278 DNA primase DnaG DnaB-binding CKQ53_RS07875 PF01807 CHC2 zinc finger CKQ53_RS07880 PF01165 Ribosomal protein S21 CKQ53_RS07890 PF02863 Arginine repressor, C-terminal domain CKQ53_RS07890 PF01316 Arginine repressor, DNA binding domain CKQ53_RS07895 PF00056 lactate/malate dehydrogenase, NAD binding domain CKQ53_RS07895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CKQ53_RS07900 PF13693 Winged helix-turn-helix DNA-binding CKQ53_RS07915 PF00348 Polyprenyl synthetase CKQ53_RS07920 PF00829 Ribosomal prokaryotic L21 protein CKQ53_RS07925 PF01016 Ribosomal L27 protein CKQ53_RS07930 PF00892 EamA-like transporter family CKQ53_RS07935 PF01926 50S ribosome-binding GTPase CKQ53_RS07935 PF01018 GTP1/OBG CKQ53_RS07940 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CKQ53_RS07945 PF01272 Transcription elongation factor, GreA/GreB, C-term CKQ53_RS07945 PF03449 Transcription elongation factor, N-terminal CKQ53_RS07950 PF01985 CRS1 / YhbY (CRM) domain CKQ53_RS07960 PF06480 FtsH Extracellular CKQ53_RS07960 PF00004 ATPase family associated with various cellular activities (AAA) CKQ53_RS07960 PF01434 Peptidase family M41 CKQ53_RS07960 PF17862 AAA+ lid domain CKQ53_RS07965 PF00809 Pterin binding enzyme CKQ53_RS07970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CKQ53_RS07970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CKQ53_RS07970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CKQ53_RS07970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CKQ53_RS07975 PF03840 Preprotein translocase SecG subunit CKQ53_RS07990 PF17384 RimP C-terminal SH3 domain CKQ53_RS07990 PF02576 RimP N-terminal domain CKQ53_RS07995 PF00575 S1 RNA binding domain CKQ53_RS07995 PF08529 NusA N-terminal domain CKQ53_RS07995 PF13184 NusA-like KH domain CKQ53_RS08000 PF04760 Translation initiation factor IF-2, N-terminal region CKQ53_RS08000 PF00009 Elongation factor Tu GTP binding domain CKQ53_RS08000 PF11987 Translation-initiation factor 2 CKQ53_RS08000 PF08364 Bacterial translation initiation factor IF-2 associated region CKQ53_RS08005 PF02033 Ribosome-binding factor A CKQ53_RS08010 PF09157 Pseudouridine synthase II TruB, C-terminal CKQ53_RS08010 PF16198 tRNA pseudouridylate synthase B C-terminal domain CKQ53_RS08010 PF01509 TruB family pseudouridylate synthase (N terminal domain) CKQ53_RS08015 PF00312 Ribosomal protein S15 CKQ53_RS08020 PF00013 KH domain CKQ53_RS08020 PF01138 3' exoribonuclease family, domain 1 CKQ53_RS08020 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CKQ53_RS08020 PF00575 S1 RNA binding domain CKQ53_RS08020 PF03725 3' exoribonuclease family, domain 2 CKQ53_RS08025 PF13181 Tetratricopeptide repeat CKQ53_RS08025 PF07719 Tetratricopeptide repeat CKQ53_RS08035 PF03880 DbpA RNA binding domain CKQ53_RS08035 PF12343 Cold shock protein DEAD box A CKQ53_RS08035 PF00271 Helicase conserved C-terminal domain CKQ53_RS08035 PF00270 DEAD/DEAH box helicase CKQ53_RS08040 PF00296 Luciferase-like monooxygenase CKQ53_RS08045 PF01136 Peptidase family U32 CKQ53_RS08050 PF01136 Peptidase family U32 CKQ53_RS08055 PF02036 SCP-2 sterol transfer family CKQ53_RS08060 PF13508 Acetyltransferase (GNAT) domain CKQ53_RS08065 PF01541 GIY-YIG catalytic domain CKQ53_RS08070 PF01791 DeoC/LacD family aldolase CKQ53_RS08075 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CKQ53_RS08075 PF00591 Glycosyl transferase family, a/b domain CKQ53_RS08075 PF02885 Glycosyl transferase family, helical bundle domain CKQ53_RS08080 PF01676 Metalloenzyme superfamily CKQ53_RS08085 PF01048 Phosphorylase superfamily CKQ53_RS08095 PF00005 ABC transporter CKQ53_RS08095 PF06472 ABC transporter transmembrane region 2 CKQ53_RS08100 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS08100 PF00593 TonB dependent receptor CKQ53_RS08105 PF16220 Domain of unknown function (DUF4880) CKQ53_RS08105 PF04773 FecR protein CKQ53_RS08110 PF08281 Sigma-70, region 4 CKQ53_RS08110 PF04542 Sigma-70 region 2 CKQ53_RS08115 PF00583 Acetyltransferase (GNAT) family CKQ53_RS08120 PF03603 DNA polymerase III psi subunit CKQ53_RS08125 PF05175 Methyltransferase small domain CKQ53_RS08125 PF08468 Methyltransferase small domain N-terminal CKQ53_RS08130 PF00248 Aldo/keto reductase family CKQ53_RS08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS08135 PF03466 LysR substrate binding domain CKQ53_RS08155 PF07256 Protein of unknown function (DUF1435) CKQ53_RS08160 PF00593 TonB dependent receptor CKQ53_RS08160 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS08165 PF03466 LysR substrate binding domain CKQ53_RS08170 PF03306 Alpha-acetolactate decarboxylase CKQ53_RS08175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS08175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS08175 PF00205 Thiamine pyrophosphate enzyme, central domain CKQ53_RS08180 PF08669 Glycine cleavage T-protein C-terminal barrel domain CKQ53_RS08180 PF01571 Aminomethyltransferase folate-binding domain CKQ53_RS08185 PF01597 Glycine cleavage H-protein CKQ53_RS08190 PF02347 Glycine cleavage system P-protein CKQ53_RS08195 PF07729 FCD domain CKQ53_RS08195 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS08205 PF01425 Amidase CKQ53_RS08215 PF00083 Sugar (and other) transporter CKQ53_RS08225 PF03006 Haemolysin-III related CKQ53_RS08235 PF03937 Flavinator of succinate dehydrogenase CKQ53_RS08240 PF07254 Membrane-bound toxin component of toxin-antitoxin system CKQ53_RS08245 PF05971 RNA methyltransferase CKQ53_RS08250 PF00258 Flavodoxin CKQ53_RS08255 PF07690 Major Facilitator Superfamily CKQ53_RS08255 PF00083 Sugar (and other) transporter CKQ53_RS08260 PF02899 Phage integrase, N-terminal SAM-like domain CKQ53_RS08260 PF00589 Phage integrase family CKQ53_RS08265 PF13098 Thioredoxin-like domain CKQ53_RS08265 PF10411 Disulfide bond isomerase protein N-terminus CKQ53_RS08270 PF17768 RecJ OB domain CKQ53_RS08270 PF02272 DHHA1 domain CKQ53_RS08270 PF01368 DHH family CKQ53_RS08280 PF00152 tRNA synthetases class II (D, K and N) CKQ53_RS08280 PF01336 OB-fold nucleic acid binding domain CKQ53_RS08295 PF00753 Metallo-beta-lactamase superfamily CKQ53_RS08305 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS08310 PF07690 Major Facilitator Superfamily CKQ53_RS08320 PF00668 Condensation domain CKQ53_RS08320 PF00975 Thioesterase domain CKQ53_RS08320 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08320 PF00550 Phosphopantetheine attachment site CKQ53_RS08320 PF00501 AMP-binding enzyme CKQ53_RS08325 PF00501 AMP-binding enzyme CKQ53_RS08325 PF00668 Condensation domain CKQ53_RS08325 PF00550 Phosphopantetheine attachment site CKQ53_RS08325 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08330 PF07993 Male sterility protein CKQ53_RS08330 PF00550 Phosphopantetheine attachment site CKQ53_RS08330 PF00501 AMP-binding enzyme CKQ53_RS08330 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08330 PF00668 Condensation domain CKQ53_RS08335 PF00550 Phosphopantetheine attachment site CKQ53_RS08335 PF00501 AMP-binding enzyme CKQ53_RS08335 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08335 PF00668 Condensation domain CKQ53_RS08340 PF16363 GDP-mannose 4,6 dehydratase CKQ53_RS08345 PF00483 Nucleotidyl transferase CKQ53_RS08350 PF04321 RmlD substrate binding domain CKQ53_RS08355 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CKQ53_RS08360 PF01050 Mannose-6-phosphate isomerase CKQ53_RS08360 PF00483 Nucleotidyl transferase CKQ53_RS08375 PF00005 ABC transporter CKQ53_RS08380 PF13847 Methyltransferase domain CKQ53_RS08380 PF00069 Protein kinase domain CKQ53_RS08385 PF13439 Glycosyltransferase Family 4 CKQ53_RS08385 PF00534 Glycosyl transferases group 1 CKQ53_RS08390 PF16363 GDP-mannose 4,6 dehydratase CKQ53_RS08395 PF16363 GDP-mannose 4,6 dehydratase CKQ53_RS08400 PF00534 Glycosyl transferases group 1 CKQ53_RS08400 PF00862 Sucrose synthase CKQ53_RS08410 PF02719 Polysaccharide biosynthesis protein CKQ53_RS08415 PF01370 NAD dependent epimerase/dehydratase family CKQ53_RS08420 PF02397 Bacterial sugar transferase CKQ53_RS08425 PF13416 Bacterial extracellular solute-binding protein CKQ53_RS08430 PF17912 MalK OB fold domain CKQ53_RS08430 PF03459 TOBE domain CKQ53_RS08430 PF00005 ABC transporter CKQ53_RS08435 PF00149 Calcineurin-like phosphoesterase CKQ53_RS08440 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS08450 PF03279 Bacterial lipid A biosynthesis acyltransferase CKQ53_RS08455 PF00860 Permease family CKQ53_RS08460 PF00999 Sodium/hydrogen exchanger family CKQ53_RS08465 PF16177 Acetyl-coenzyme A synthetase N-terminus CKQ53_RS08465 PF00501 AMP-binding enzyme CKQ53_RS08465 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08480 PF17969 L,D-transpeptidase C-terminal domain CKQ53_RS08480 PF03734 L,D-transpeptidase catalytic domain CKQ53_RS08485 PF10371 Domain of unknown function CKQ53_RS08485 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CKQ53_RS08485 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CKQ53_RS08485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS08485 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CKQ53_RS08495 PF07478 D-ala D-ala ligase C-terminus CKQ53_RS08495 PF01820 D-ala D-ala ligase N-terminus CKQ53_RS08500 PF13406 Transglycosylase SLT domain CKQ53_RS08510 PF02463 RecF/RecN/SMC N terminal domain CKQ53_RS08515 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CKQ53_RS08530 PF13693 Winged helix-turn-helix DNA-binding CKQ53_RS08535 PF00589 Phage integrase family CKQ53_RS08535 PF13356 Arm DNA-binding domain CKQ53_RS08545 PF01668 SmpB protein CKQ53_RS08550 PF03364 Polyketide cyclase / dehydrase and lipid transport CKQ53_RS08555 PF03658 RnfH family Ubiquitin CKQ53_RS08560 PF04355 SmpA / OmlA family CKQ53_RS08570 PF01025 GrpE CKQ53_RS08575 PF01566 Natural resistance-associated macrophage protein CKQ53_RS08580 PF01361 Tautomerase enzyme CKQ53_RS08590 PF06779 Uncharacterised MFS-type transporter YbfB CKQ53_RS08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS08595 PF03466 LysR substrate binding domain CKQ53_RS08600 PF00293 NUDIX domain CKQ53_RS08605 PF00923 Transaldolase/Fructose-6-phosphate aldolase CKQ53_RS08610 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CKQ53_RS08615 PF01218 Coproporphyrinogen III oxidase CKQ53_RS08620 PF00583 Acetyltransferase (GNAT) family CKQ53_RS08625 PF06572 Protein of unknown function (DUF1131) CKQ53_RS08630 PF04261 Dyp-type peroxidase family CKQ53_RS08635 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS08640 PF12704 MacB-like periplasmic core domain CKQ53_RS08640 PF00005 ABC transporter CKQ53_RS08640 PF02687 FtsX-like permease family CKQ53_RS08645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKQ53_RS08650 PF00072 Response regulator receiver domain CKQ53_RS08650 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS08655 PF00672 HAMP domain CKQ53_RS08655 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS08655 PF16527 Two-component sensor protein CpxA, periplasmic domain CKQ53_RS08655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS08660 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CKQ53_RS08665 PF02896 PEP-utilising enzyme, TIM barrel domain CKQ53_RS08665 PF00391 PEP-utilising enzyme, mobile domain CKQ53_RS08665 PF05524 PEP-utilising enzyme, N-terminal CKQ53_RS08670 PF00381 PTS HPr component phosphorylation site CKQ53_RS08675 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS08685 PF04354 ZipA, C-terminal FtsZ-binding domain CKQ53_RS08690 PF04380 Membrane fusogenic activity CKQ53_RS08695 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CKQ53_RS08705 PF05683 Fumarase C-terminus CKQ53_RS08705 PF05681 Fumarate hydratase (Fumerase) CKQ53_RS08710 PF13532 2OG-Fe(II) oxygenase superfamily CKQ53_RS08715 PF14001 YdfZ protein CKQ53_RS08720 PF07690 Major Facilitator Superfamily CKQ53_RS08725 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CKQ53_RS08725 PF14489 QueF-like protein CKQ53_RS08740 PF03350 Uncharacterized protein family, UPF0114 CKQ53_RS08745 PF01202 Shikimate kinase CKQ53_RS08750 PF00920 Dehydratase family CKQ53_RS08755 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CKQ53_RS08760 PF03824 High-affinity nickel-transport protein CKQ53_RS08770 PF01327 Polypeptide deformylase CKQ53_RS08775 PF00328 Histidine phosphatase superfamily (branch 2) CKQ53_RS08795 PF00583 Acetyltransferase (GNAT) family CKQ53_RS08800 PF00561 alpha/beta hydrolase fold CKQ53_RS08810 PF00083 Sugar (and other) transporter CKQ53_RS08815 PF06800 Sugar transport protein CKQ53_RS08825 PF12833 Helix-turn-helix domain CKQ53_RS08830 PF00171 Aldehyde dehydrogenase family CKQ53_RS08835 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS08835 PF00107 Zinc-binding dehydrogenase CKQ53_RS08850 PF00501 AMP-binding enzyme CKQ53_RS08850 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08860 PF02801 Beta-ketoacyl synthase, C-terminal domain CKQ53_RS08860 PF00109 Beta-ketoacyl synthase, N-terminal domain CKQ53_RS08865 PF07977 FabA-like domain CKQ53_RS08875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS08875 PF03466 LysR substrate binding domain CKQ53_RS08880 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS08885 PF01791 DeoC/LacD family aldolase CKQ53_RS08895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKQ53_RS08905 PF03611 PTS system sugar-specific permease component CKQ53_RS08915 PF00365 Phosphofructokinase CKQ53_RS08920 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CKQ53_RS08920 PF08479 POTRA domain, ShlB-type CKQ53_RS08920 PF17287 POTRA domain CKQ53_RS08925 PF04829 Pre-toxin domain with VENN motif CKQ53_RS08925 PF05860 haemagglutination activity domain CKQ53_RS08925 PF13332 Hemagglutinin repeat CKQ53_RS08945 PF00550 Phosphopantetheine attachment site CKQ53_RS08945 PF08659 KR domain CKQ53_RS08945 PF02801 Beta-ketoacyl synthase, C-terminal domain CKQ53_RS08945 PF00109 Beta-ketoacyl synthase, N-terminal domain CKQ53_RS08945 PF16197 Ketoacyl-synthetase C-terminal extension CKQ53_RS08945 PF00698 Acyl transferase domain CKQ53_RS08945 PF14765 Polyketide synthase dehydratase CKQ53_RS08950 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS08950 PF00501 AMP-binding enzyme CKQ53_RS08955 PF13737 Transposase DDE domain CKQ53_RS08960 PF00589 Phage integrase family CKQ53_RS08960 PF13356 Arm DNA-binding domain CKQ53_RS08970 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CKQ53_RS08970 PF01276 Orn/Lys/Arg decarboxylase, major domain CKQ53_RS08970 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CKQ53_RS08975 PF00324 Amino acid permease CKQ53_RS08980 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CKQ53_RS08980 PF01464 Transglycosylase SLT domain CKQ53_RS08985 PF04362 Bacterial Fe(2+) trafficking CKQ53_RS08990 PF14815 NUDIX domain CKQ53_RS08990 PF10576 Iron-sulfur binding domain of endonuclease III CKQ53_RS08990 PF00730 HhH-GPD superfamily base excision DNA repair protein CKQ53_RS08990 PF00633 Helix-hairpin-helix motif CKQ53_RS09005 PF00419 Fimbrial protein CKQ53_RS09010 PF00577 Outer membrane usher protein CKQ53_RS09010 PF13954 PapC N-terminal domain CKQ53_RS09010 PF13953 PapC C-terminal domain CKQ53_RS09015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CKQ53_RS09015 PF02753 Pili assembly chaperone PapD, C-terminal domain CKQ53_RS09025 PF00419 Fimbrial protein CKQ53_RS09035 PF02390 Putative methyltransferase CKQ53_RS09040 PF04320 Protein with unknown function (DUF469) CKQ53_RS09045 PF11101 Protein of unknown function (DUF2884) CKQ53_RS09050 PF00082 Subtilase family CKQ53_RS09050 PF05922 Peptidase inhibitor I9 CKQ53_RS09055 PF00248 Aldo/keto reductase family CKQ53_RS09060 PF06004 Bacterial protein of unknown function (DUF903) CKQ53_RS09065 PF03741 Integral membrane protein TerC family CKQ53_RS09070 PF02976 DNA mismatch repair enzyme MutH CKQ53_RS09075 PF00293 NUDIX domain CKQ53_RS09080 PF02896 PEP-utilising enzyme, TIM barrel domain CKQ53_RS09080 PF00391 PEP-utilising enzyme, mobile domain CKQ53_RS09080 PF05524 PEP-utilising enzyme, N-terminal CKQ53_RS09080 PF01590 GAF domain CKQ53_RS09085 PF01790 Prolipoprotein diacylglyceryl transferase CKQ53_RS09090 PF00303 Thymidylate synthase CKQ53_RS09115 PF17946 RecC C-terminal domain CKQ53_RS09125 PF12705 PD-(D/E)XK nuclease superfamily CKQ53_RS09125 PF00580 UvrD/REP helicase N-terminal domain CKQ53_RS09125 PF13361 UvrD-like helicase C-terminal domain CKQ53_RS09130 PF13538 UvrD-like helicase C-terminal domain CKQ53_RS09135 PF00583 Acetyltransferase (GNAT) family CKQ53_RS09135 PF00696 Amino acid kinase family CKQ53_RS09140 PF11741 AMIN domain CKQ53_RS09140 PF01520 N-acetylmuramoyl-L-alanine amidase CKQ53_RS09160 PF03562 MltA specific insert domain CKQ53_RS09160 PF06725 3D domain CKQ53_RS09165 PF00899 ThiF family CKQ53_RS09170 PF02657 Fe-S metabolism associated domain CKQ53_RS09175 PF00266 Aminotransferase class-V CKQ53_RS09180 PF06004 Bacterial protein of unknown function (DUF903) CKQ53_RS09185 PF03466 LysR substrate binding domain CKQ53_RS09185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS09190 PF04241 Protein of unknown function (DUF423) CKQ53_RS09195 PF01728 FtsJ-like methyltransferase CKQ53_RS09195 PF18125 RlmM ferredoxin-like domain CKQ53_RS09200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CKQ53_RS09200 PF01367 5'-3' exonuclease, C-terminal SAM fold CKQ53_RS09205 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CKQ53_RS09205 PF03641 Possible lysine decarboxylase CKQ53_RS09205 PF11892 Domain of unknown function (DUF3412) CKQ53_RS09210 PF07348 Syd protein (SUKH-2) CKQ53_RS09215 PF04287 tRNA pseudouridine synthase C CKQ53_RS09225 PF00258 Flavodoxin CKQ53_RS09230 PF11944 Protein of unknown function (DUF3461) CKQ53_RS09235 PF14602 Hexapeptide repeat of succinyl-transferase CKQ53_RS09235 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CKQ53_RS09235 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS09240 PF01909 Nucleotidyltransferase domain CKQ53_RS09240 PF01842 ACT domain CKQ53_RS09240 PF08335 GlnD PII-uridylyltransferase CKQ53_RS09240 PF01966 HD domain CKQ53_RS09245 PF00557 Metallopeptidase family M24 CKQ53_RS09250 PF00318 Ribosomal protein S2 CKQ53_RS09255 PF00889 Elongation factor TS CKQ53_RS09260 PF00696 Amino acid kinase family CKQ53_RS09265 PF01765 Ribosome recycling factor CKQ53_RS09270 PF13288 DXP reductoisomerase C-terminal domain CKQ53_RS09270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CKQ53_RS09270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CKQ53_RS09275 PF01255 Putative undecaprenyl diphosphate synthase CKQ53_RS09285 PF02163 Peptidase family M50 CKQ53_RS09285 PF17820 PDZ domain CKQ53_RS09290 PF01103 Surface antigen CKQ53_RS09290 PF07244 Surface antigen variable number repeat CKQ53_RS09295 PF03938 Outer membrane protein (OmpH-like) CKQ53_RS09300 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CKQ53_RS09300 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS09305 PF07977 FabA-like domain CKQ53_RS09310 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS09310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CKQ53_RS09315 PF02684 Lipid-A-disaccharide synthetase CKQ53_RS09320 PF01351 Ribonuclease HII CKQ53_RS09325 PF01336 OB-fold nucleic acid binding domain CKQ53_RS09325 PF07733 Bacterial DNA polymerase III alpha NTPase domain CKQ53_RS09325 PF02811 PHP domain CKQ53_RS09325 PF14579 Helix-hairpin-helix motif CKQ53_RS09325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CKQ53_RS09330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CKQ53_RS09335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKQ53_RS09340 PF01171 PP-loop family CKQ53_RS09340 PF11734 TilS substrate C-terminal domain CKQ53_RS09340 PF09179 TilS substrate binding domain CKQ53_RS09345 PF07073 Modulator of Rho-dependent transcription termination (ROF) CKQ53_RS09350 PF06786 Uncharacterised protein family (UPF0253) CKQ53_RS09355 PF07152 YaeQ protein CKQ53_RS09365 PF01624 MutS domain I CKQ53_RS09365 PF05192 MutS domain III CKQ53_RS09365 PF05190 MutS family domain IV CKQ53_RS09365 PF00488 MutS domain V CKQ53_RS09365 PF05188 MutS domain II CKQ53_RS09400 PF13693 Winged helix-turn-helix DNA-binding CKQ53_RS09420 PF04002 RadC-like JAB domain CKQ53_RS09425 PF02899 Phage integrase, N-terminal SAM-like domain CKQ53_RS09425 PF00589 Phage integrase family CKQ53_RS09500 PF00672 HAMP domain CKQ53_RS09500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS09500 PF02203 Tar ligand binding domain homologue CKQ53_RS09505 PF00465 Iron-containing alcohol dehydrogenase CKQ53_RS09515 PF03831 PhnA domain CKQ53_RS09515 PF08274 PhnA Zinc-Ribbon CKQ53_RS09520 PF17151 Periplasmic sensor domain CKQ53_RS09520 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS09540 PF01717 Cobalamin-independent synthase, Catalytic domain CKQ53_RS09545 PF00005 ABC transporter CKQ53_RS09550 PF01202 Shikimate kinase CKQ53_RS09555 PF06865 Pyrimidine/purine nucleoside phosphorylase CKQ53_RS09560 PF00672 HAMP domain CKQ53_RS09560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS09560 PF02203 Tar ligand binding domain homologue CKQ53_RS09565 PF04381 Putative exonuclease, RdgC CKQ53_RS09570 PF13476 AAA domain CKQ53_RS09575 PF00149 Calcineurin-like phosphoesterase CKQ53_RS09575 PF12320 Type 5 capsule protein repressor C-terminal domain CKQ53_RS09580 PF00072 Response regulator receiver domain CKQ53_RS09580 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS09585 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS09585 PF00989 PAS fold CKQ53_RS09585 PF11808 Phosphate regulon sensor protein PhoR CKQ53_RS09590 PF01717 Cobalamin-independent synthase, Catalytic domain CKQ53_RS09595 PF05525 Branched-chain amino acid transport protein CKQ53_RS09600 PF00324 Amino acid permease CKQ53_RS09605 PF10417 C-terminal domain of 1-Cys peroxiredoxin CKQ53_RS09605 PF00578 AhpC/TSA family CKQ53_RS09610 PF04336 Acyl carrier protein phosphodiesterase CKQ53_RS09615 PF02547 Queuosine biosynthesis protein CKQ53_RS09620 PF01702 Queuine tRNA-ribosyltransferase CKQ53_RS09625 PF02699 Preprotein translocase subunit CKQ53_RS09630 PF07549 SecD/SecF GG Motif CKQ53_RS09630 PF02355 Protein export membrane protein CKQ53_RS09630 PF13721 SecD export protein N-terminal TM region CKQ53_RS09635 PF02355 Protein export membrane protein CKQ53_RS09635 PF07549 SecD/SecF GG Motif CKQ53_RS09640 PF11622 Protein of unknown function (DUF3251) CKQ53_RS09645 PF00689 Cation transporting ATPase, C-terminus CKQ53_RS09645 PF00690 Cation transporter/ATPase, N-terminus CKQ53_RS09650 PF03477 ATP cone domain CKQ53_RS09655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CKQ53_RS09655 PF01872 RibD C-terminal domain CKQ53_RS09660 PF00885 6,7-dimethyl-8-ribityllumazine synthase CKQ53_RS09665 PF01029 NusB family CKQ53_RS09670 PF02769 AIR synthase related protein, C-terminal domain CKQ53_RS09670 PF00586 AIR synthase related protein, N-terminal domain CKQ53_RS09675 PF04608 Phosphatidylglycerophosphatase A CKQ53_RS09680 PF02779 Transketolase, pyrimidine binding domain CKQ53_RS09680 PF02780 Transketolase, C-terminal domain CKQ53_RS09680 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CKQ53_RS09685 PF00348 Polyprenyl synthetase CKQ53_RS09690 PF02609 Exonuclease VII small subunit CKQ53_RS09695 PF02568 Thiamine biosynthesis protein (ThiI) CKQ53_RS09695 PF02926 THUMP domain CKQ53_RS09700 PF01965 DJ-1/PfpI family CKQ53_RS09705 PF08546 Ketopantoate reductase PanE/ApbA C terminal CKQ53_RS09705 PF02558 Ketopantoate reductase PanE/ApbA CKQ53_RS09710 PF04461 Protein of unknown function (DUF520) CKQ53_RS09715 PF00171 Aldehyde dehydrogenase family CKQ53_RS09715 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CKQ53_RS09715 PF14850 DNA-binding domain of Proline dehydrogenase CKQ53_RS09715 PF01619 Proline dehydrogenase CKQ53_RS09720 PF00005 ABC transporter CKQ53_RS09730 PF07690 Major Facilitator Superfamily CKQ53_RS09735 PF01040 UbiA prenyltransferase family CKQ53_RS09740 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CKQ53_RS09745 PF00510 Cytochrome c oxidase subunit III CKQ53_RS09750 PF00115 Cytochrome C and Quinol oxidase polypeptide I CKQ53_RS09755 PF06481 COX Aromatic Rich Motif CKQ53_RS09755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CKQ53_RS09760 PF07690 Major Facilitator Superfamily CKQ53_RS09765 PF03923 Uncharacterized lipoprotein CKQ53_RS09765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CKQ53_RS09770 PF01722 BolA-like protein CKQ53_RS09775 PF05697 Bacterial trigger factor protein (TF) CKQ53_RS09775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CKQ53_RS09775 PF05698 Bacterial trigger factor protein (TF) C-terminus CKQ53_RS09780 PF00574 Clp protease CKQ53_RS09785 PF06689 ClpX C4-type zinc finger CKQ53_RS09785 PF10431 C-terminal, D2-small domain, of ClpB protein CKQ53_RS09785 PF07724 AAA domain (Cdc48 subfamily) CKQ53_RS09790 PF00004 ATPase family associated with various cellular activities (AAA) CKQ53_RS09790 PF05362 Lon protease (S16) C-terminal proteolytic domain CKQ53_RS09790 PF02190 ATP-dependent protease La (LON) substrate-binding domain CKQ53_RS09795 PF00216 Bacterial DNA-binding protein CKQ53_RS09800 PF13145 PPIC-type PPIASE domain CKQ53_RS09810 PF06508 Queuosine biosynthesis protein QueC CKQ53_RS09820 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS09820 PF13404 AsnC-type helix-turn-helix domain CKQ53_RS09825 PF00664 ABC transporter transmembrane region CKQ53_RS09825 PF00005 ABC transporter CKQ53_RS09830 PF00005 ABC transporter CKQ53_RS09830 PF00664 ABC transporter transmembrane region CKQ53_RS09835 PF00543 Nitrogen regulatory protein P-II CKQ53_RS09840 PF00909 Ammonium Transporter Family CKQ53_RS09850 PF09619 Type III secretion system lipoprotein chaperone (YscW) CKQ53_RS09855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CKQ53_RS09865 PF05321 Haemolysin expression modulating protein CKQ53_RS09870 PF10757 Biofilm formation regulator YbaJ CKQ53_RS09875 PF00444 Ribosomal protein L36 CKQ53_RS09880 PF01197 Ribosomal protein L31 CKQ53_RS09885 PF00873 AcrB/AcrD/AcrF family CKQ53_RS09890 PF00529 HlyD membrane-fusion protein of T1SS CKQ53_RS09890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKQ53_RS09895 PF08361 MAATS-type transcriptional repressor, C-terminal region CKQ53_RS09895 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS09900 PF12794 Mechanosensitive ion channel inner membrane domain 1 CKQ53_RS09900 PF12795 Mechanosensitive ion channel porin domain CKQ53_RS09900 PF00924 Mechanosensitive ion channel CKQ53_RS09905 PF10689 Protein of unknown function (DUF2496) CKQ53_RS09915 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CKQ53_RS09920 PF04304 Protein of unknown function (DUF454) CKQ53_RS09925 PF00156 Phosphoribosyl transferase domain CKQ53_RS09930 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CKQ53_RS09930 PF12170 DNA polymerase III tau subunit V interacting with alpha CKQ53_RS09930 PF12169 DNA polymerase III subunits gamma and tau domain III CKQ53_RS09935 PF02575 YbaB/EbfC DNA-binding family CKQ53_RS09940 PF02132 RecR protein CKQ53_RS09940 PF13662 Toprim domain CKQ53_RS09945 PF00183 Hsp90 protein CKQ53_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS09950 PF05191 Adenylate kinase, active site lid CKQ53_RS09955 PF00762 Ferrochelatase CKQ53_RS09960 PF02254 TrkA-N domain CKQ53_RS09960 PF00999 Sodium/hydrogen exchanger family CKQ53_RS09965 PF02872 5'-nucleotidase, C-terminal domain CKQ53_RS09965 PF00149 Calcineurin-like phosphoesterase CKQ53_RS09970 PF04073 Aminoacyl-tRNA editing domain CKQ53_RS09975 PF01963 TraB family CKQ53_RS09980 PF01957 NfeD-like C-terminal, partner-binding CKQ53_RS09990 PF07508 Recombinase CKQ53_RS09990 PF13408 Recombinase zinc beta ribbon domain CKQ53_RS09990 PF00239 Resolvase, N terminal domain CKQ53_RS09995 PF00239 Resolvase, N terminal domain CKQ53_RS09995 PF02796 Helix-turn-helix domain of resolvase CKQ53_RS10040 PF00111 2Fe-2S iron-sulfur cluster binding domain CKQ53_RS10045 PF00268 Ribonucleotide reductase, small chain CKQ53_RS10050 PF00317 Ribonucleotide reductase, all-alpha domain CKQ53_RS10050 PF03477 ATP cone domain CKQ53_RS10050 PF02867 Ribonucleotide reductase, barrel domain CKQ53_RS10060 PF00521 DNA gyrase/topoisomerase IV, subunit A CKQ53_RS10060 PF03989 DNA gyrase C-terminal domain, beta-propeller CKQ53_RS10065 PF00072 Response regulator receiver domain CKQ53_RS10065 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS10065 PF09456 RcsC Alpha-Beta-Loop (ABL) CKQ53_RS10070 PF00072 Response regulator receiver domain CKQ53_RS10070 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS10075 PF01627 Hpt domain CKQ53_RS10075 PF16359 RcsD-ABL domain CKQ53_RS10080 PF07690 Major Facilitator Superfamily CKQ53_RS10090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS10090 PF16582 Middle domain of thiamine pyrophosphate CKQ53_RS10090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS10095 PF12697 Alpha/beta hydrolase family CKQ53_RS10100 PF00378 Enoyl-CoA hydratase/isomerase CKQ53_RS10105 PF13378 Enolase C-terminal domain-like CKQ53_RS10110 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS10110 PF00501 AMP-binding enzyme CKQ53_RS10115 PF00199 Catalase CKQ53_RS10115 PF06628 Catalase-related immune-responsive CKQ53_RS10120 PF07437 YfaZ precursor CKQ53_RS10125 PF00994 Probable molybdopterin binding domain CKQ53_RS10130 PF00085 Thioredoxin CKQ53_RS10135 PF00106 short chain dehydrogenase CKQ53_RS10140 PF13472 GDSL-like Lipase/Acylhydrolase family CKQ53_RS10145 PF00005 ABC transporter CKQ53_RS10155 PF12792 CSS motif domain associated with EAL CKQ53_RS10155 PF00563 EAL domain CKQ53_RS10160 PF00419 Fimbrial protein CKQ53_RS10165 PF00577 Outer membrane usher protein CKQ53_RS10165 PF13954 PapC N-terminal domain CKQ53_RS10165 PF13953 PapC C-terminal domain CKQ53_RS10170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CKQ53_RS10170 PF02753 Pili assembly chaperone PapD, C-terminal domain CKQ53_RS10180 PF13302 Acetyltransferase (GNAT) domain CKQ53_RS10190 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS10190 PF00593 TonB dependent receptor CKQ53_RS10195 PF01497 Periplasmic binding protein CKQ53_RS10200 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS10205 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS10215 PF00586 AIR synthase related protein, N-terminal domain CKQ53_RS10215 PF02769 AIR synthase related protein, C-terminal domain CKQ53_RS10225 PF00860 Permease family CKQ53_RS10230 PF00308 Bacterial dnaA protein CKQ53_RS10235 PF03960 ArsC family CKQ53_RS10240 PF01435 Peptidase family M48 CKQ53_RS10240 PF07720 Tetratricopeptide repeat CKQ53_RS10245 PF00578 AhpC/TSA family CKQ53_RS10250 PF01842 ACT domain CKQ53_RS10255 PF00701 Dihydrodipicolinate synthetase family CKQ53_RS10260 PF06804 NlpB/DapX lipoprotein CKQ53_RS10265 PF01259 SAICAR synthetase CKQ53_RS10270 PF04284 Protein of unknown function (DUF441) CKQ53_RS10275 PF08351 Domain of unknown function (DUF1726) CKQ53_RS10275 PF13718 GNAT acetyltransferase 2 CKQ53_RS10275 PF17176 tRNA-binding domain CKQ53_RS10275 PF05127 Helicase CKQ53_RS10280 PF02230 Phospholipase/Carboxylesterase CKQ53_RS10285 PF13980 Uncharacterised protein family (UPF0370) CKQ53_RS10290 PF02557 D-alanyl-D-alanine carboxypeptidase CKQ53_RS10295 PF01546 Peptidase family M20/M25/M40 CKQ53_RS10295 PF07687 Peptidase dimerisation domain CKQ53_RS10300 PF03960 ArsC family CKQ53_RS10305 PF00313 'Cold-shock' DNA-binding domain CKQ53_RS10310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CKQ53_RS10315 PF00795 Carbon-nitrogen hydrolase CKQ53_RS10320 PF02416 mttA/Hcf106 family CKQ53_RS10325 PF04055 Radical SAM superfamily CKQ53_RS10325 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CKQ53_RS10330 PF03099 Biotin/lipoate A/B protein ligase family CKQ53_RS10335 PF04359 Protein of unknown function (DUF493) CKQ53_RS10340 PF07943 Penicillin-binding protein 5, C-terminal domain CKQ53_RS10340 PF00768 D-alanyl-D-alanine carboxypeptidase CKQ53_RS10345 PF03330 Lytic transglycolase CKQ53_RS10345 PF05036 Sporulation related domain CKQ53_RS10350 PF01098 Cell cycle protein CKQ53_RS10355 PF00905 Penicillin binding protein transpeptidase domain CKQ53_RS10355 PF03717 Penicillin-binding Protein dimerisation domain CKQ53_RS10360 PF02590 Predicted SPOUT methyltransferase CKQ53_RS10370 PF01467 Cytidylyltransferase-like CKQ53_RS10375 PF06144 DNA polymerase III, delta subunit CKQ53_RS10375 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CKQ53_RS10380 PF04390 Lipopolysaccharide-assembly CKQ53_RS10385 PF00133 tRNA synthetases class I (I, L, M and V) CKQ53_RS10385 PF13603 Leucyl-tRNA synthetase, Domain 2 CKQ53_RS10385 PF08264 Anticodon-binding domain of tRNA CKQ53_RS10395 PF07295 Zinc-ribbon containing domain CKQ53_RS10400 PF00005 ABC transporter CKQ53_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS10415 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS10420 PF00795 Carbon-nitrogen hydrolase CKQ53_RS10425 PF00571 CBS domain CKQ53_RS10425 PF03471 Transporter associated domain CKQ53_RS10430 PF02130 Uncharacterized protein family UPF0054 CKQ53_RS10435 PF02562 PhoH-like protein CKQ53_RS10440 PF01938 TRAM domain CKQ53_RS10440 PF04055 Radical SAM superfamily CKQ53_RS10440 PF00919 Uncharacterized protein family UPF0004 CKQ53_RS10445 PF01494 FAD binding domain CKQ53_RS10450 PF00893 Small Multidrug Resistance protein CKQ53_RS10490 PF13537 Glutamine amidotransferase domain CKQ53_RS10490 PF00733 Asparagine synthase CKQ53_RS10495 PF01047 MarR family CKQ53_RS10495 PF00480 ROK family CKQ53_RS10500 PF01979 Amidohydrolase family CKQ53_RS10505 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CKQ53_RS10510 PF00367 phosphotransferase system, EIIB CKQ53_RS10510 PF02378 Phosphotransferase system, EIIC CKQ53_RS10510 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CKQ53_RS10515 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CKQ53_RS10515 PF00749 tRNA synthetases class I (E and Q), catalytic domain CKQ53_RS10520 PF01475 Ferric uptake regulator family CKQ53_RS10525 PF00258 Flavodoxin CKQ53_RS10530 PF02203 Tar ligand binding domain homologue CKQ53_RS10530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS10530 PF00672 HAMP domain CKQ53_RS10535 PF01402 Ribbon-helix-helix protein, copG family CKQ53_RS10540 PF12697 Alpha/beta hydrolase family CKQ53_RS10545 PF03925 SeqA protein C-terminal domain CKQ53_RS10545 PF17206 SeqA protein N-terminal domain CKQ53_RS10550 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CKQ53_RS10550 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CKQ53_RS10550 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CKQ53_RS10550 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CKQ53_RS10560 PF00072 Response regulator receiver domain CKQ53_RS10560 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS10570 PF10725 Protein of unknown function (DUF2517) CKQ53_RS10575 PF08349 Protein of unknown function (DUF1722) CKQ53_RS10580 PF00875 DNA photolyase CKQ53_RS10580 PF03441 FAD binding domain of DNA photolyase CKQ53_RS10585 PF01784 NIF3 (NGG1p interacting factor 3) CKQ53_RS10590 PF02682 Carboxyltransferase domain, subdomain C and D CKQ53_RS10595 PF02626 Carboxyltransferase domain, subdomain A and B CKQ53_RS10600 PF03746 LamB/YcsF family CKQ53_RS10605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CKQ53_RS10605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CKQ53_RS10605 PF06827 Zinc finger found in FPG and IleRS CKQ53_RS10610 PF00285 Citrate synthase, C-terminal domain CKQ53_RS10615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CKQ53_RS10620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CKQ53_RS10625 PF02910 Fumarate reductase flavoprotein C-term CKQ53_RS10625 PF00890 FAD binding domain CKQ53_RS10630 PF13085 2Fe-2S iron-sulfur cluster binding domain CKQ53_RS10635 PF16870 2-oxoglutarate dehydrogenase C-terminal CKQ53_RS10635 PF00676 Dehydrogenase E1 component CKQ53_RS10635 PF16078 2-oxoglutarate dehydrogenase N-terminus CKQ53_RS10635 PF02779 Transketolase, pyrimidine binding domain CKQ53_RS10640 PF02817 e3 binding domain CKQ53_RS10640 PF00364 Biotin-requiring enzyme CKQ53_RS10640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CKQ53_RS10645 PF00549 CoA-ligase CKQ53_RS10645 PF08442 ATP-grasp domain CKQ53_RS10650 PF00549 CoA-ligase CKQ53_RS10650 PF02629 CoA binding domain CKQ53_RS10655 PF01654 Cytochrome bd terminal oxidase subunit I CKQ53_RS10660 PF02322 Cytochrome bd terminal oxidase subunit II CKQ53_RS10665 PF08173 Membrane bound YbgT-like protein CKQ53_RS10670 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CKQ53_RS10675 PF03061 Thioesterase superfamily CKQ53_RS10680 PF01618 MotA/TolQ/ExbB proton channel family CKQ53_RS10685 PF02472 Biopolymer transport protein ExbD/TolR CKQ53_RS10690 PF06519 TolA C-terminal CKQ53_RS10690 PF06519 TolA C-terminal CKQ53_RS10695 PF07676 WD40-like Beta Propeller Repeat CKQ53_RS10695 PF04052 TolB amino-terminal domain CKQ53_RS10700 PF00691 OmpA family CKQ53_RS10705 PF13174 Tetratricopeptide repeat CKQ53_RS10705 PF16331 TolA binding protein trimerisation CKQ53_RS10725 PF04973 Nicotinamide mononucleotide transporter CKQ53_RS10730 PF01545 Cation efflux family CKQ53_RS10735 PF00793 DAHP synthetase I family CKQ53_RS10740 PF00300 Histidine phosphatase superfamily (branch 1) CKQ53_RS10745 PF01263 Aldose 1-epimerase CKQ53_RS10750 PF16363 GDP-mannose 4,6 dehydratase CKQ53_RS10755 PF00005 ABC transporter CKQ53_RS10760 PF03459 TOBE domain CKQ53_RS10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS10765 PF10766 Multidrug efflux pump-associated protein AcrZ CKQ53_RS10775 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS10780 PF03459 TOBE domain CKQ53_RS10780 PF00005 ABC transporter CKQ53_RS10790 PF10282 Lactonase, 7-bladed beta-propeller CKQ53_RS10805 PF06903 VirK protein CKQ53_RS10810 PF09334 tRNA synthetases class I (M) CKQ53_RS10810 PF01588 Putative tRNA binding domain CKQ53_RS10815 PF10609 NUBPL iron-transfer P-loop NTPase CKQ53_RS10820 PF00485 Phosphoribulokinase / Uridine kinase family CKQ53_RS10825 PF00692 dUTPase CKQ53_RS10830 PF05170 AsmA family CKQ53_RS10840 PF00571 CBS domain CKQ53_RS10840 PF03741 Integral membrane protein TerC family CKQ53_RS10840 PF03471 Transporter associated domain CKQ53_RS10845 PF10531 SLBB domain CKQ53_RS10845 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CKQ53_RS10845 PF02563 Polysaccharide biosynthesis/export protein CKQ53_RS10850 PF01451 Low molecular weight phosphotyrosine protein phosphatase CKQ53_RS10855 PF13614 AAA domain CKQ53_RS10855 PF13807 G-rich domain on putative tyrosine kinase CKQ53_RS10855 PF02706 Chain length determinant protein CKQ53_RS10865 PF13439 Glycosyltransferase Family 4 CKQ53_RS10865 PF00534 Glycosyl transferases group 1 CKQ53_RS10870 PF13439 Glycosyltransferase Family 4 CKQ53_RS10870 PF00534 Glycosyl transferases group 1 CKQ53_RS10875 PF02397 Bacterial sugar transferase CKQ53_RS10885 PF00535 Glycosyl transferase family 2 CKQ53_RS10895 PF00534 Glycosyl transferases group 1 CKQ53_RS10895 PF13439 Glycosyltransferase Family 4 CKQ53_RS10905 PF00483 Nucleotidyl transferase CKQ53_RS10905 PF01050 Mannose-6-phosphate isomerase CKQ53_RS10910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CKQ53_RS10910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CKQ53_RS10910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CKQ53_RS10910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CKQ53_RS10920 PF01370 NAD dependent epimerase/dehydratase family CKQ53_RS10925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CKQ53_RS10925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CKQ53_RS10925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CKQ53_RS10930 PF00483 Nucleotidyl transferase CKQ53_RS10935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CKQ53_RS10935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CKQ53_RS10960 PF04393 Protein of unknown function (DUF535) CKQ53_RS10965 PF05171 Haemin-degrading HemS.ChuX domain CKQ53_RS10970 PF01497 Periplasmic binding protein CKQ53_RS10975 PF01032 FecCD transport family CKQ53_RS10980 PF00005 ABC transporter CKQ53_RS10985 PF00593 TonB dependent receptor CKQ53_RS10985 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS10990 PF01048 Phosphorylase superfamily CKQ53_RS10990 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CKQ53_RS10995 PF00563 EAL domain CKQ53_RS10995 PF00360 Phytochrome region CKQ53_RS10995 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS10995 PF01590 GAF domain CKQ53_RS11000 PF02203 Tar ligand binding domain homologue CKQ53_RS11000 PF00672 HAMP domain CKQ53_RS11000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS11010 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS11015 PF00106 short chain dehydrogenase CKQ53_RS11025 PF02470 MlaD protein CKQ53_RS11030 PF04403 Paraquat-inducible protein A CKQ53_RS11035 PF04403 Paraquat-inducible protein A CKQ53_RS11045 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS11045 PF08362 YcdC-like protein, C-terminal region CKQ53_RS11050 PF00072 Response regulator receiver domain CKQ53_RS11050 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS11055 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS11060 PF00155 Aminotransferase class I and II CKQ53_RS11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS11065 PF03466 LysR substrate binding domain CKQ53_RS11075 PF00296 Luciferase-like monooxygenase CKQ53_RS11080 PF00296 Luciferase-like monooxygenase CKQ53_RS11090 PF00296 Luciferase-like monooxygenase CKQ53_RS11095 PF00005 ABC transporter CKQ53_RS11100 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11110 PF07690 Major Facilitator Superfamily CKQ53_RS11120 PF09084 NMT1/THI5 like CKQ53_RS11125 PF01614 Bacterial transcriptional regulator CKQ53_RS11125 PF09339 IclR helix-turn-helix domain CKQ53_RS11135 PF04954 Siderophore-interacting protein CKQ53_RS11135 PF08021 Siderophore-interacting FAD-binding domain CKQ53_RS11140 PF02321 Outer membrane efflux protein CKQ53_RS11145 PF00873 AcrB/AcrD/AcrF family CKQ53_RS11150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKQ53_RS11150 PF00529 HlyD membrane-fusion protein of T1SS CKQ53_RS11160 PF03551 Transcriptional regulator PadR-like family CKQ53_RS11165 PF00293 NUDIX domain CKQ53_RS11175 PF04474 Protein of unknown function (DUF554) CKQ53_RS11180 PF02441 Flavoprotein CKQ53_RS11185 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CKQ53_RS11190 PF03466 LysR substrate binding domain CKQ53_RS11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS11195 PF01738 Dienelactone hydrolase family CKQ53_RS11205 PF11799 impB/mucB/samB family C-terminal domain CKQ53_RS11205 PF00817 impB/mucB/samB family CKQ53_RS11205 PF13438 Domain of unknown function (DUF4113) CKQ53_RS11210 PF00717 Peptidase S24-like CKQ53_RS11220 PF01638 HxlR-like helix-turn-helix CKQ53_RS11225 PF05368 NmrA-like family CKQ53_RS11230 PF00107 Zinc-binding dehydrogenase CKQ53_RS11230 PF00698 Acyl transferase domain CKQ53_RS11230 PF16197 Ketoacyl-synthetase C-terminal extension CKQ53_RS11230 PF14765 Polyketide synthase dehydratase CKQ53_RS11230 PF00109 Beta-ketoacyl synthase, N-terminal domain CKQ53_RS11230 PF00550 Phosphopantetheine attachment site CKQ53_RS11230 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS11230 PF08659 KR domain CKQ53_RS11230 PF02801 Beta-ketoacyl synthase, C-terminal domain CKQ53_RS11250 PF00132 Bacterial transferase hexapeptide (six repeats) CKQ53_RS11260 PF00005 ABC transporter CKQ53_RS11280 PF12704 MacB-like periplasmic core domain CKQ53_RS11280 PF00005 ABC transporter CKQ53_RS11280 PF02687 FtsX-like permease family CKQ53_RS11300 PF01292 Prokaryotic cytochrome b561 CKQ53_RS11305 PF00226 DnaJ domain CKQ53_RS11305 PF01556 DnaJ C terminal domain CKQ53_RS11315 PF00202 Aminotransferase class-III CKQ53_RS11320 PF04958 Arginine N-succinyltransferase beta subunit CKQ53_RS11325 PF00171 Aldehyde dehydrogenase family CKQ53_RS11330 PF04996 Succinylarginine dihydrolase CKQ53_RS11335 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CKQ53_RS11340 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11345 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11350 PF00005 ABC transporter CKQ53_RS11355 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CKQ53_RS11355 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CKQ53_RS11355 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CKQ53_RS11360 PF00005 ABC transporter CKQ53_RS11360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11365 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS11370 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11380 PF00403 Heavy-metal-associated domain CKQ53_RS11390 PF02583 Metal-sensitive transcriptional repressor CKQ53_RS11395 PF08668 HDOD domain CKQ53_RS11395 PF00563 EAL domain CKQ53_RS11400 PF00072 Response regulator receiver domain CKQ53_RS11400 PF01584 CheW-like domain CKQ53_RS11405 PF07690 Major Facilitator Superfamily CKQ53_RS11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS11415 PF03466 LysR substrate binding domain CKQ53_RS11425 PF02769 AIR synthase related protein, C-terminal domain CKQ53_RS11425 PF00586 AIR synthase related protein, N-terminal domain CKQ53_RS11430 PF17788 HypF Kae1-like domain CKQ53_RS11430 PF00708 Acylphosphatase CKQ53_RS11430 PF01300 Telomere recombination CKQ53_RS11430 PF07503 HypF finger CKQ53_RS11435 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS11440 PF07690 Major Facilitator Superfamily CKQ53_RS11445 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS11445 PF08362 YcdC-like protein, C-terminal region CKQ53_RS11450 PF02321 Outer membrane efflux protein CKQ53_RS11460 PF13533 Biotin-lipoyl like CKQ53_RS11475 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS11485 PF01844 HNH endonuclease CKQ53_RS11520 PF00375 Sodium:dicarboxylate symporter family CKQ53_RS11525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CKQ53_RS11525 PF00384 Molybdopterin oxidoreductase CKQ53_RS11525 PF01568 Molydopterin dinucleotide binding domain CKQ53_RS11530 PF00892 EamA-like transporter family CKQ53_RS11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS11535 PF03466 LysR substrate binding domain CKQ53_RS11540 PF00375 Sodium:dicarboxylate symporter family CKQ53_RS11550 PF02615 Malate/L-lactate dehydrogenase CKQ53_RS11555 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS11565 PF03605 Anaerobic c4-dicarboxylate membrane transporter CKQ53_RS11570 PF00202 Aminotransferase class-III CKQ53_RS11580 PF00593 TonB dependent receptor CKQ53_RS11580 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS11590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CKQ53_RS11590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CKQ53_RS11595 PF07690 Major Facilitator Superfamily CKQ53_RS11600 PF06276 Ferric iron reductase FhuF-like transporter CKQ53_RS11600 PF04183 IucA / IucC family CKQ53_RS11605 PF03328 HpcH/HpaI aldolase/citrate lyase family CKQ53_RS11610 PF06276 Ferric iron reductase FhuF-like transporter CKQ53_RS11610 PF04183 IucA / IucC family CKQ53_RS11615 PF01497 Periplasmic binding protein CKQ53_RS11620 PF01032 FecCD transport family CKQ53_RS11625 PF01032 FecCD transport family CKQ53_RS11630 PF00005 ABC transporter CKQ53_RS11635 PF03737 Aldolase/RraA CKQ53_RS11640 PF00324 Amino acid permease CKQ53_RS11645 PF04055 Radical SAM superfamily CKQ53_RS11645 PF06463 Molybdenum Cofactor Synthesis C CKQ53_RS11650 PF13520 Amino acid permease CKQ53_RS11655 PF01810 LysE type translocator CKQ53_RS11675 PF13673 Acetyltransferase (GNAT) domain CKQ53_RS11675 PF18014 Acetyltransferase (GNAT) domain CKQ53_RS11680 PF02611 CDP-diacylglycerol pyrophosphatase CKQ53_RS11685 PF00465 Iron-containing alcohol dehydrogenase CKQ53_RS11690 PF03466 LysR substrate binding domain CKQ53_RS11690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS11695 PF00171 Aldehyde dehydrogenase family CKQ53_RS11700 PF13416 Bacterial extracellular solute-binding protein CKQ53_RS11705 PF08402 TOBE domain CKQ53_RS11705 PF00005 ABC transporter CKQ53_RS11710 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11715 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11720 PF00171 Aldehyde dehydrogenase family CKQ53_RS11725 PF00083 Sugar (and other) transporter CKQ53_RS11730 PF01048 Phosphorylase superfamily CKQ53_RS11735 PF03825 Nucleoside H+ symporter CKQ53_RS11740 PF00561 alpha/beta hydrolase fold CKQ53_RS11745 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS11745 PF00072 Response regulator receiver domain CKQ53_RS11750 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11755 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS11755 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS11760 PF00005 ABC transporter CKQ53_RS11760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS11765 PF00005 ABC transporter CKQ53_RS11765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS11770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS11775 PF01011 PQQ enzyme repeat CKQ53_RS11780 PF00158 Sigma-54 interaction domain CKQ53_RS11780 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS11790 PF00419 Fimbrial protein CKQ53_RS11795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CKQ53_RS11795 PF02753 Pili assembly chaperone PapD, C-terminal domain CKQ53_RS11800 PF02753 Pili assembly chaperone PapD, C-terminal domain CKQ53_RS11800 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CKQ53_RS11805 PF00300 Histidine phosphatase superfamily (branch 1) CKQ53_RS11810 PF16925 Tetracyclin repressor-like, C-terminal domain CKQ53_RS11810 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS11820 PF00171 Aldehyde dehydrogenase family CKQ53_RS11825 PF03279 Bacterial lipid A biosynthesis acyltransferase CKQ53_RS11830 PF12792 CSS motif domain associated with EAL CKQ53_RS11830 PF00563 EAL domain CKQ53_RS11850 PF06167 Glucose-regulated metallo-peptidase M90 CKQ53_RS11875 PF05247 Flagellar transcriptional activator (FlhD) CKQ53_RS11880 PF05280 Flagellar transcriptional activator (FlhC) CKQ53_RS11885 PF01618 MotA/TolQ/ExbB proton channel family CKQ53_RS11890 PF13677 Membrane MotB of proton-channel complex MotA/MotB CKQ53_RS11890 PF00691 OmpA family CKQ53_RS11895 PF01627 Hpt domain CKQ53_RS11895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS11895 PF02895 Signal transducing histidine kinase, homodimeric domain CKQ53_RS11895 PF09078 CheY binding CKQ53_RS11895 PF01584 CheW-like domain CKQ53_RS11900 PF01584 CheW-like domain CKQ53_RS11905 PF00672 HAMP domain CKQ53_RS11905 PF02203 Tar ligand binding domain homologue CKQ53_RS11905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS11910 PF01739 CheR methyltransferase, SAM binding domain CKQ53_RS11910 PF03705 CheR methyltransferase, all-alpha domain CKQ53_RS11915 PF00072 Response regulator receiver domain CKQ53_RS11915 PF01339 CheB methylesterase CKQ53_RS11920 PF00072 Response regulator receiver domain CKQ53_RS11925 PF04344 Chemotaxis phosphatase, CheZ CKQ53_RS11930 PF01312 FlhB HrpN YscU SpaS Family CKQ53_RS11935 PF00771 FHIPEP family CKQ53_RS11945 PF05130 FlgN protein CKQ53_RS11950 PF04316 Anti-sigma-28 factor, FlgM CKQ53_RS11955 PF13144 Chaperone for flagella basal body P-ring formation CKQ53_RS11955 PF17656 FlgA N-terminal domain CKQ53_RS11960 PF00460 Flagella basal body rod protein CKQ53_RS11965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKQ53_RS11965 PF00460 Flagella basal body rod protein CKQ53_RS11970 PF03963 Flagellar hook capping protein - N-terminal region CKQ53_RS11970 PF13861 FlgD Tudor-like domain CKQ53_RS11970 PF13860 FlgD Ig-like domain CKQ53_RS11975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKQ53_RS11975 PF00460 Flagella basal body rod protein CKQ53_RS11975 PF07559 Flagellar basal body protein FlaE CKQ53_RS11980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKQ53_RS11980 PF00460 Flagella basal body rod protein CKQ53_RS11985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKQ53_RS11985 PF00460 Flagella basal body rod protein CKQ53_RS11990 PF02107 Flagellar L-ring protein CKQ53_RS11995 PF02119 Flagellar P-ring protein CKQ53_RS12000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CKQ53_RS12000 PF10135 Rod binding protein CKQ53_RS12005 PF00460 Flagella basal body rod protein CKQ53_RS12005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CKQ53_RS12010 PF00669 Bacterial flagellin N-terminal helical region CKQ53_RS12015 PF02465 Flagellar hook-associated protein 2 N-terminus CKQ53_RS12015 PF07195 Flagellar hook-associated protein 2 C-terminus CKQ53_RS12020 PF02561 Flagellar protein FliS CKQ53_RS12025 PF05400 Flagellar protein FliT CKQ53_RS12030 PF02049 Flagellar hook-basal body complex protein FliE CKQ53_RS12035 PF08345 Flagellar M-ring protein C-terminal CKQ53_RS12035 PF01514 Secretory protein of YscJ/FliF family CKQ53_RS12040 PF01706 FliG C-terminal domain CKQ53_RS12040 PF14841 FliG middle domain CKQ53_RS12040 PF14842 FliG N-terminal domain CKQ53_RS12045 PF02108 Flagellar assembly protein FliH CKQ53_RS12050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKQ53_RS12050 PF18269 T3SS EscN ATPase C-terminal domain CKQ53_RS12055 PF02050 Flagellar FliJ protein CKQ53_RS12060 PF02120 Flagellar hook-length control protein FliK CKQ53_RS12065 PF03748 Flagellar basal body-associated protein FliL CKQ53_RS12070 PF02154 Flagellar motor switch protein FliM CKQ53_RS12070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CKQ53_RS12075 PF16973 Flagellar motor switch protein FliN N-terminal CKQ53_RS12075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CKQ53_RS12080 PF04347 Flagellar biosynthesis protein, FliO CKQ53_RS12085 PF00813 FliP family CKQ53_RS12090 PF01313 Bacterial export proteins, family 3 CKQ53_RS12095 PF01311 Bacterial export proteins, family 1 CKQ53_RS12100 PF00669 Bacterial flagellin N-terminal helical region CKQ53_RS12100 PF00700 Bacterial flagellin C-terminal helical region CKQ53_RS12105 PF00535 Glycosyl transferase family 2 CKQ53_RS12115 PF04545 Sigma-70, region 4 CKQ53_RS12115 PF04542 Sigma-70 region 2 CKQ53_RS12115 PF04539 Sigma-70 region 3 CKQ53_RS12120 PF02899 Phage integrase, N-terminal SAM-like domain CKQ53_RS12125 PF02562 PhoH-like protein CKQ53_RS12165 PF07977 FabA-like domain CKQ53_RS12170 PF05362 Lon protease (S16) C-terminal proteolytic domain CKQ53_RS12170 PF13654 AAA domain CKQ53_RS12175 PF06303 MatP N-terminal domain CKQ53_RS12175 PF17414 MatP C-terminal ribbon-helix-helix domain CKQ53_RS12185 PF10753 Toxin GhoT_OrtT CKQ53_RS12210 PF04349 Periplasmic glucan biosynthesis protein, MdoG CKQ53_RS12215 PF00535 Glycosyl transferase family 2 CKQ53_RS12220 PF03279 Bacterial lipid A biosynthesis acyltransferase CKQ53_RS12225 PF00581 Rhodanese-like domain CKQ53_RS12225 PF12368 Rhodanase C-terminal CKQ53_RS12225 PF17773 UPF0176 acylphosphatase like domain CKQ53_RS12230 PF04264 YceI-like domain CKQ53_RS12235 PF01292 Prokaryotic cytochrome b561 CKQ53_RS12240 PF13991 BssS protein family CKQ53_RS12245 PF06183 DinI-like family CKQ53_RS12250 PF01979 Amidohydrolase family CKQ53_RS12260 PF12111 Polyribonucleotide phosphorylase C terminal CKQ53_RS12260 PF10150 Ribonuclease E/G family CKQ53_RS12260 PF00575 S1 RNA binding domain CKQ53_RS12270 PF00849 RNA pseudouridylate synthase CKQ53_RS12270 PF01479 S4 domain CKQ53_RS12275 PF02545 Maf-like protein CKQ53_RS12280 PF02620 Large ribosomal RNA subunit accumulation protein YceD CKQ53_RS12285 PF01783 Ribosomal L32p protein family CKQ53_RS12290 PF02504 Fatty acid synthesis protein CKQ53_RS12295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CKQ53_RS12295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CKQ53_RS12300 PF00698 Acyl transferase domain CKQ53_RS12310 PF00550 Phosphopantetheine attachment site CKQ53_RS12315 PF02801 Beta-ketoacyl synthase, C-terminal domain CKQ53_RS12315 PF00109 Beta-ketoacyl synthase, N-terminal domain CKQ53_RS12320 PF01063 Amino-transferase class IV CKQ53_RS12325 PF02618 YceG-like family CKQ53_RS12330 PF02223 Thymidylate kinase CKQ53_RS12335 PF09115 DNA polymerase III, delta subunit, C terminal CKQ53_RS12340 PF01026 TatD related DNase CKQ53_RS12345 PF00367 phosphotransferase system, EIIB CKQ53_RS12345 PF02378 Phosphotransferase system, EIIC CKQ53_RS12355 PF01230 HIT domain CKQ53_RS12360 PF13036 Peptidoglycan-synthase activator LpoB CKQ53_RS12365 PF01636 Phosphotransferase enzyme family CKQ53_RS12370 PF00933 Glycosyl hydrolase family 3 N terminal domain CKQ53_RS12375 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS12380 PF05433 Glycine zipper 2TM domain CKQ53_RS12385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS12390 PF17757 UvrB interaction domain CKQ53_RS12390 PF03461 TRCF domain CKQ53_RS12390 PF00271 Helicase conserved C-terminal domain CKQ53_RS12390 PF00270 DEAD/DEAH box helicase CKQ53_RS12390 PF02559 CarD-like/TRCF domain CKQ53_RS12395 PF12704 MacB-like periplasmic core domain CKQ53_RS12395 PF02687 FtsX-like permease family CKQ53_RS12400 PF00005 ABC transporter CKQ53_RS12405 PF02687 FtsX-like permease family CKQ53_RS12405 PF12704 MacB-like periplasmic core domain CKQ53_RS12415 PF02146 Sir2 family CKQ53_RS12420 PF00877 NlpC/P60 family CKQ53_RS12430 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CKQ53_RS12435 PF03734 L,D-transpeptidase catalytic domain CKQ53_RS12435 PF01471 Putative peptidoglycan binding domain CKQ53_RS12440 PF05951 Bacterial protein of unknown function (DUF882) CKQ53_RS12445 PF00753 Metallo-beta-lactamase superfamily CKQ53_RS12450 PF00155 Aminotransferase class I and II CKQ53_RS12455 PF00267 Gram-negative porin CKQ53_RS12460 PF00152 tRNA synthetases class II (D, K and N) CKQ53_RS12460 PF01336 OB-fold nucleic acid binding domain CKQ53_RS12465 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CKQ53_RS12465 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CKQ53_RS12470 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CKQ53_RS12470 PF11940 Domain of unknown function (DUF3458) Ig-like fold CKQ53_RS12470 PF01433 Peptidase family M1 domain CKQ53_RS12475 PF00005 ABC transporter CKQ53_RS12480 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS12485 PF00296 Luciferase-like monooxygenase CKQ53_RS12490 PF09084 NMT1/THI5 like CKQ53_RS12495 PF03358 NADPH-dependent FMN reductase CKQ53_RS12500 PF01180 Dihydroorotate dehydrogenase CKQ53_RS12505 PF07126 Cell-division protein ZapC CKQ53_RS12510 PF10672 S-adenosylmethionine-dependent methyltransferase CKQ53_RS12510 PF02926 THUMP domain CKQ53_RS12510 PF01170 Putative RNA methylase family UPF0020 CKQ53_RS12515 PF16326 ABC transporter C-terminal domain CKQ53_RS12515 PF12848 ABC transporter CKQ53_RS12515 PF00005 ABC transporter CKQ53_RS12520 PF04403 Paraquat-inducible protein A CKQ53_RS12525 PF02470 MlaD protein CKQ53_RS12530 PF03886 ABC-type transport auxiliary lipoprotein component CKQ53_RS12535 PF04957 Ribosome modulation factor CKQ53_RS12540 PF00793 DAHP synthetase I family CKQ53_RS12545 PF03618 Kinase/pyrophosphorylase CKQ53_RS12550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CKQ53_RS12550 PF00391 PEP-utilising enzyme, mobile domain CKQ53_RS12550 PF02896 PEP-utilising enzyme, TIM barrel domain CKQ53_RS12555 PF01594 AI-2E family transporter CKQ53_RS12560 PF01565 FAD binding domain CKQ53_RS12560 PF02913 FAD linked oxidases, C-terminal domain CKQ53_RS12560 PF13183 4Fe-4S dicluster domain CKQ53_RS12565 PF03061 Thioesterase superfamily CKQ53_RS12575 PF01521 Iron-sulphur cluster biosynthesis CKQ53_RS12580 PF01458 Uncharacterized protein family (UPF0051) CKQ53_RS12585 PF00005 ABC transporter CKQ53_RS12590 PF01458 Uncharacterized protein family (UPF0051) CKQ53_RS12595 PF00266 Aminotransferase class-V CKQ53_RS12600 PF02657 Fe-S metabolism associated domain CKQ53_RS12605 PF01476 LysM domain CKQ53_RS12605 PF17969 L,D-transpeptidase C-terminal domain CKQ53_RS12605 PF03734 L,D-transpeptidase catalytic domain CKQ53_RS12610 PF04728 Lipoprotein leucine-zipper CKQ53_RS12615 PF02887 Pyruvate kinase, alpha/beta domain CKQ53_RS12615 PF00224 Pyruvate kinase, barrel domain CKQ53_RS12620 PF00874 PRD domain CKQ53_RS12620 PF03123 CAT RNA binding domain CKQ53_RS12625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CKQ53_RS12625 PF00367 phosphotransferase system, EIIB CKQ53_RS12625 PF02378 Phosphotransferase system, EIIC CKQ53_RS12630 PF00232 Glycosyl hydrolase family 1 CKQ53_RS12640 PF11471 Maltoporin periplasmic N-terminal extension CKQ53_RS12640 PF02264 LamB porin CKQ53_RS12645 PF01156 Inosine-uridine preferring nucleoside hydrolase CKQ53_RS12655 PF00072 Response regulator receiver domain CKQ53_RS12655 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS12665 PF00005 ABC transporter CKQ53_RS12675 PF00668 Condensation domain CKQ53_RS12675 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS12675 PF00501 AMP-binding enzyme CKQ53_RS12675 PF00975 Thioesterase domain CKQ53_RS12675 PF00550 Phosphopantetheine attachment site CKQ53_RS12685 PF02322 Cytochrome bd terminal oxidase subunit II CKQ53_RS12690 PF01654 Cytochrome bd terminal oxidase subunit I CKQ53_RS12695 PF00106 short chain dehydrogenase CKQ53_RS12705 PF01370 NAD dependent epimerase/dehydratase family CKQ53_RS12710 PF07690 Major Facilitator Superfamily CKQ53_RS12720 PF01817 Chorismate mutase type II CKQ53_RS12720 PF02153 Prephenate dehydrogenase CKQ53_RS12725 PF00850 Histone deacetylase domain CKQ53_RS12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS12750 PF03466 LysR substrate binding domain CKQ53_RS12760 PF13416 Bacterial extracellular solute-binding protein CKQ53_RS12765 PF00171 Aldehyde dehydrogenase family CKQ53_RS12775 PF01266 FAD dependent oxidoreductase CKQ53_RS12785 PF01554 MatE CKQ53_RS12790 PF00677 Lumazine binding domain CKQ53_RS12800 PF00356 Bacterial regulatory proteins, lacI family CKQ53_RS12810 PF00877 NlpC/P60 family CKQ53_RS12815 PF00462 Glutaredoxin CKQ53_RS12820 PF00929 Exonuclease CKQ53_RS12825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CKQ53_RS12830 PF06945 Protein of unknown function (DUF1289) CKQ53_RS12835 PF01047 MarR family CKQ53_RS12840 PF05433 Glycine zipper 2TM domain CKQ53_RS12845 PF03702 Anhydro-N-acetylmuramic acid kinase CKQ53_RS12850 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CKQ53_RS12855 PF01243 Pyridoxamine 5'-phosphate oxidase CKQ53_RS12855 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CKQ53_RS12860 PF00579 tRNA synthetases class I (W and Y) CKQ53_RS12860 PF01479 S4 domain CKQ53_RS12865 PF08543 Phosphomethylpyrimidine kinase CKQ53_RS12870 PF02798 Glutathione S-transferase, N-terminal domain CKQ53_RS12870 PF00043 Glutathione S-transferase, C-terminal domain CKQ53_RS12875 PF00694 Aconitase C-terminal domain CKQ53_RS12875 PF00330 Aconitase family (aconitate hydratase) CKQ53_RS12885 PF00925 GTP cyclohydrolase II CKQ53_RS12890 PF01569 PAP2 superfamily CKQ53_RS12895 PF06305 Lipopolysaccharide assembly protein A domain CKQ53_RS12900 PF18073 Rubredoxin metal binding domain CKQ53_RS12905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CKQ53_RS12910 PF01253 Translation initiation factor SUI1 CKQ53_RS12915 PF05433 Glycine zipper 2TM domain CKQ53_RS12920 PF17876 Cold shock domain CKQ53_RS12920 PF00575 S1 RNA binding domain CKQ53_RS12920 PF00773 RNB domain CKQ53_RS12920 PF08206 Ribonuclease B OB domain CKQ53_RS12925 PF00384 Molybdopterin oxidoreductase CKQ53_RS12930 PF00367 phosphotransferase system, EIIB CKQ53_RS12930 PF02378 Phosphotransferase system, EIIC CKQ53_RS12935 PF11975 Family 4 glycosyl hydrolase C-terminal domain CKQ53_RS12935 PF02056 Family 4 glycosyl hydrolase CKQ53_RS12940 PF07702 UTRA domain CKQ53_RS12940 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS12945 PF03466 LysR substrate binding domain CKQ53_RS12945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS12955 PF00005 ABC transporter CKQ53_RS12960 PF00005 ABC transporter CKQ53_RS12960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS13025 PF06630 Enterobacterial exodeoxyribonuclease VIII CKQ53_RS13025 PF12684 PDDEXK-like domain of unknown function (DUF3799) CKQ53_RS13055 PF01381 Helix-turn-helix CKQ53_RS13055 PF00717 Peptidase S24-like CKQ53_RS13120 PF05772 NinB protein CKQ53_RS13140 PF03589 Antitermination protein CKQ53_RS13160 PF03245 Bacteriophage Rz lysis protein CKQ53_RS13335 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS13340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS13345 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS13345 PF00158 Sigma-54 interaction domain CKQ53_RS13350 PF04012 PspA/IM30 family CKQ53_RS13355 PF06667 Phage shock protein B CKQ53_RS13360 PF04024 PspC domain CKQ53_RS13365 PF04317 YcjX-like family, DUF463 CKQ53_RS13370 PF05128 Domain of unknown function (DUF697) CKQ53_RS13375 PF07690 Major Facilitator Superfamily CKQ53_RS13380 PF00158 Sigma-54 interaction domain CKQ53_RS13380 PF18024 Helix-turn-helix domain CKQ53_RS13400 PF08534 Redoxin CKQ53_RS13405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS13410 PF01544 CorA-like Mg2+ transporter protein CKQ53_RS13420 PF01171 PP-loop family CKQ53_RS13430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS13430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKQ53_RS13435 PF11739 Dicarboxylate transport CKQ53_RS13440 PF13617 YnbE-like lipoprotein CKQ53_RS13445 PF02525 Flavodoxin-like fold CKQ53_RS13450 PF00270 DEAD/DEAH box helicase CKQ53_RS13450 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CKQ53_RS13450 PF04408 Helicase associated domain (HA2) CKQ53_RS13450 PF11898 Domain of unknown function (DUF3418) CKQ53_RS13450 PF00271 Helicase conserved C-terminal domain CKQ53_RS13465 PF00089 Trypsin CKQ53_RS13475 PF00672 HAMP domain CKQ53_RS13475 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS13480 PF00072 Response regulator receiver domain CKQ53_RS13480 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS13485 PF00916 Sulfate permease family CKQ53_RS13485 PF01740 STAS domain CKQ53_RS13490 PF01699 Sodium/calcium exchanger protein CKQ53_RS13495 PF04752 ChaC-like protein CKQ53_RS13500 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS13505 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS13505 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS13510 PF00005 ABC transporter CKQ53_RS13510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS13515 PF00005 ABC transporter CKQ53_RS13515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS13535 PF04226 Transglycosylase associated protein CKQ53_RS13540 PF00465 Iron-containing alcohol dehydrogenase CKQ53_RS13550 PF08402 TOBE domain CKQ53_RS13550 PF00005 ABC transporter CKQ53_RS13555 PF00155 Aminotransferase class I and II CKQ53_RS13555 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS13560 PF00202 Aminotransferase class-III CKQ53_RS13565 PF00171 Aldehyde dehydrogenase family CKQ53_RS13575 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS13580 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS13585 PF01809 Putative membrane protein insertion efficiency factor CKQ53_RS13595 PF05992 SbmA/BacA-like family CKQ53_RS13600 PF01312 FlhB HrpN YscU SpaS Family CKQ53_RS13610 PF01313 Bacterial export proteins, family 3 CKQ53_RS13615 PF00813 FliP family CKQ53_RS13620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CKQ53_RS13635 PF18269 T3SS EscN ATPase C-terminal domain CKQ53_RS13635 PF02874 ATP synthase alpha/beta family, beta-barrel domain CKQ53_RS13635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CKQ53_RS13645 PF00771 FHIPEP family CKQ53_RS13655 PF08281 Sigma-70, region 4 CKQ53_RS13655 PF04542 Sigma-70 region 2 CKQ53_RS13660 PF05231 MASE1 CKQ53_RS13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS13660 PF07730 Histidine kinase CKQ53_RS13665 PF00072 Response regulator receiver domain CKQ53_RS13665 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS13670 PF00158 Sigma-54 interaction domain CKQ53_RS13670 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS13685 PF01514 Secretory protein of YscJ/FliF family CKQ53_RS13710 PF00263 Bacterial type II and III secretion system protein CKQ53_RS13710 PF03958 Bacterial type II/III secretion system short domain CKQ53_RS13735 PF03466 LysR substrate binding domain CKQ53_RS13735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS13740 PF00730 HhH-GPD superfamily base excision DNA repair protein CKQ53_RS13740 PF00633 Helix-hairpin-helix motif CKQ53_RS13740 PF10576 Iron-sulfur binding domain of endonuclease III CKQ53_RS13745 PF03116 NQR2, RnfD, RnfE family CKQ53_RS13750 PF13237 4Fe-4S dicluster domain CKQ53_RS13750 PF10531 SLBB domain CKQ53_RS13750 PF13375 RnfC Barrel sandwich hybrid domain CKQ53_RS13750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CKQ53_RS13755 PF00232 Glycosyl hydrolase family 1 CKQ53_RS13760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CKQ53_RS13760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CKQ53_RS13765 PF13593 SBF-like CPA transporter family (DUF4137) CKQ53_RS13770 PF00962 Adenosine/AMP deaminase CKQ53_RS13775 PF06097 Bacterial protein of unknown function (DUF945) CKQ53_RS13780 PF01238 Phosphomannose isomerase type I CKQ53_RS13785 PF10415 Fumarase C C-terminus CKQ53_RS13785 PF00206 Lyase CKQ53_RS13790 PF05472 DNA replication terminus site-binding protein (Ter protein) CKQ53_RS13795 PF07690 Major Facilitator Superfamily CKQ53_RS13800 PF03466 LysR substrate binding domain CKQ53_RS13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS13805 PF00480 ROK family CKQ53_RS13815 PF10091 Putative glucoamylase CKQ53_RS13815 PF06165 Glycosyltransferase family 36 CKQ53_RS13815 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain CKQ53_RS13820 PF06649 Protein of unknown function (DUF1161) CKQ53_RS13825 PF06932 Protein of unknown function (DUF1283) CKQ53_RS13840 PF00106 short chain dehydrogenase CKQ53_RS13845 PF08241 Methyltransferase domain CKQ53_RS13850 PF01965 DJ-1/PfpI family CKQ53_RS13865 PF02423 Ornithine cyclodeaminase/mu-crystallin family CKQ53_RS13870 PF04960 Glutaminase CKQ53_RS13875 PF03330 Lytic transglycolase CKQ53_RS13880 PF11656 YjbD family (DUF3811) CKQ53_RS13885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS13885 PF00672 HAMP domain CKQ53_RS13885 PF02203 Tar ligand binding domain homologue CKQ53_RS13890 PF02311 AraC-like ligand binding domain CKQ53_RS13890 PF12833 Helix-turn-helix domain CKQ53_RS13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS13900 PF03466 LysR substrate binding domain CKQ53_RS13925 PF02566 OsmC-like protein CKQ53_RS13930 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKQ53_RS13960 PF12902 Ferritin-like CKQ53_RS13970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CKQ53_RS13970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CKQ53_RS13975 PF00027 Cyclic nucleotide-binding domain CKQ53_RS13975 PF00325 Bacterial regulatory proteins, crp family CKQ53_RS13990 PF02233 NAD(P) transhydrogenase beta subunit CKQ53_RS13995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CKQ53_RS13995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CKQ53_RS13995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CKQ53_RS14000 PF07338 Protein of unknown function (DUF1471) CKQ53_RS14010 PF13369 Transglutaminase-like superfamily CKQ53_RS14015 PF17827 PrmC N-terminal domain CKQ53_RS14015 PF13847 Methyltransferase domain CKQ53_RS14020 PF03462 PCRF domain CKQ53_RS14020 PF00472 RF-1 domain CKQ53_RS14025 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CKQ53_RS14025 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CKQ53_RS14025 PF01488 Shikimate / quinate 5-dehydrogenase CKQ53_RS14030 PF03550 Outer membrane lipoprotein LolB CKQ53_RS14035 PF08544 GHMP kinases C terminal CKQ53_RS14035 PF00288 GHMP kinases N terminal domain CKQ53_RS14040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CKQ53_RS14040 PF14572 Phosphoribosyl synthetase-associated domain CKQ53_RS14045 PF10762 Protein of unknown function (DUF2583) CKQ53_RS14050 PF01195 Peptidyl-tRNA hydrolase CKQ53_RS14055 PF01926 50S ribosome-binding GTPase CKQ53_RS14055 PF06071 Protein of unknown function (DUF933) CKQ53_RS14085 PF00106 short chain dehydrogenase CKQ53_RS14090 PF03466 LysR substrate binding domain CKQ53_RS14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS14105 PF00563 EAL domain CKQ53_RS14105 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS14105 PF13426 PAS domain CKQ53_RS14110 PF09330 D-lactate dehydrogenase, membrane binding CKQ53_RS14110 PF01565 FAD binding domain CKQ53_RS14115 PF02690 Na+/Pi-cotransporter CKQ53_RS14120 PF08402 TOBE domain CKQ53_RS14120 PF00005 ABC transporter CKQ53_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS14145 PF07702 UTRA domain CKQ53_RS14145 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS14165 PF03211 Pectate lyase CKQ53_RS14175 PF08272 Topoisomerase I zinc-ribbon-like CKQ53_RS14175 PF01131 DNA topoisomerase CKQ53_RS14175 PF01751 Toprim domain CKQ53_RS14175 PF01396 Topoisomerase DNA binding C4 zinc finger CKQ53_RS14180 PF10692 Protein of unknown function (DUF2498) CKQ53_RS14185 PF08496 Peptidase family S49 N-terminal CKQ53_RS14185 PF01343 Peptidase family S49 CKQ53_RS14190 PF00106 short chain dehydrogenase CKQ53_RS14195 PF01479 S4 domain CKQ53_RS14195 PF00849 RNA pseudouridylate synthase CKQ53_RS14200 PF01300 Telomere recombination CKQ53_RS14205 PF02811 PHP domain CKQ53_RS14210 PF00425 chorismate binding enzyme CKQ53_RS14210 PF04715 Anthranilate synthase component I, N terminal region CKQ53_RS14215 PF00117 Glutamine amidotransferase class-I CKQ53_RS14220 PF02885 Glycosyl transferase family, helical bundle domain CKQ53_RS14220 PF00591 Glycosyl transferase family, a/b domain CKQ53_RS14230 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS14235 PF00290 Tryptophan synthase alpha chain CKQ53_RS14240 PF03692 Putative zinc- or iron-chelating domain CKQ53_RS14250 PF04279 Intracellular septation protein A CKQ53_RS14255 PF03061 Thioesterase superfamily CKQ53_RS14260 PF03544 Gram-negative bacterial TonB protein C-terminal CKQ53_RS14265 PF03795 YCII-related domain CKQ53_RS14270 PF00672 HAMP domain CKQ53_RS14270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS14270 PF02203 Tar ligand binding domain homologue CKQ53_RS14275 PF13396 Phospholipase_D-nuclease N-terminal CKQ53_RS14275 PF13091 PLD-like domain CKQ53_RS14280 PF04269 Protein of unknown function, DUF440 CKQ53_RS14285 PF00005 ABC transporter CKQ53_RS14285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS14290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS14290 PF00005 ABC transporter CKQ53_RS14295 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS14295 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS14300 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS14305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS14320 PF00816 H-NS histone family CKQ53_RS14325 PF00483 Nucleotidyl transferase CKQ53_RS14330 PF00072 Response regulator receiver domain CKQ53_RS14335 PF01734 Patatin-like phospholipase CKQ53_RS14340 PF02810 SEC-C motif CKQ53_RS14345 PF01842 ACT domain CKQ53_RS14345 PF00551 Formyl transferase CKQ53_RS14360 PF03458 UPF0126 domain CKQ53_RS14365 PF03372 Endonuclease/Exonuclease/phosphatase family CKQ53_RS14370 PF07383 Protein of unknown function (DUF1496) CKQ53_RS14375 PF01131 DNA topoisomerase CKQ53_RS14375 PF01751 Toprim domain CKQ53_RS14380 PF00881 Nitroreductase family CKQ53_RS14390 PF00710 Asparaginase, N-terminal CKQ53_RS14390 PF17763 Glutaminase/Asparaginase C-terminal domain CKQ53_RS14395 PF00857 Isochorismatase family CKQ53_RS14400 PF07023 Protein of unknown function (DUF1315) CKQ53_RS14405 PF01641 SelR domain CKQ53_RS14410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CKQ53_RS14410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CKQ53_RS14415 PF01263 Aldose 1-epimerase CKQ53_RS14420 PF06629 MltA-interacting protein MipA CKQ53_RS14425 PF06798 PrkA serine protein kinase C-terminal domain CKQ53_RS14425 PF08298 PrkA AAA domain CKQ53_RS14430 PF04285 Protein of unknown function (DUF444) CKQ53_RS14435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS14435 PF00005 ABC transporter CKQ53_RS14440 PF00005 ABC transporter CKQ53_RS14440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS14445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS14455 PF04293 SpoVR like protein CKQ53_RS14465 PF02600 Disulfide bond formation protein DsbB CKQ53_RS14485 PF03692 Putative zinc- or iron-chelating domain CKQ53_RS14490 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKQ53_RS14495 PF05166 YcgL domain CKQ53_RS14500 PF05209 Septum formation inhibitor MinC, N-terminal domain CKQ53_RS14500 PF03775 Septum formation inhibitor MinC, C-terminal domain CKQ53_RS14505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CKQ53_RS14510 PF03776 Septum formation topological specificity factor MinE CKQ53_RS14515 PF01612 3'-5' exonuclease CKQ53_RS14515 PF00570 HRDC domain CKQ53_RS14520 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS14520 PF00501 AMP-binding enzyme CKQ53_RS14525 PF03843 Outer membrane lipoprotein Slp family CKQ53_RS14530 PF00814 Glycoprotease family CKQ53_RS14545 PF03701 Uncharacterised protein family (UPF0181) CKQ53_RS14555 PF00293 NUDIX domain CKQ53_RS14560 PF03315 Serine dehydratase beta chain CKQ53_RS14560 PF03313 Serine dehydratase alpha chain CKQ53_RS14570 PF03610 PTS system fructose IIA component CKQ53_RS14570 PF03830 PTS system sorbose subfamily IIB component CKQ53_RS14575 PF03609 PTS system sorbose-specific iic component CKQ53_RS14580 PF03613 PTS system mannose/fructose/sorbose family IID component CKQ53_RS14585 PF06173 Protein of unknown function (DUF986) CKQ53_RS14590 PF02659 Putative manganese efflux pump CKQ53_RS14595 PF13847 Methyltransferase domain CKQ53_RS14600 PF00313 'Cold-shock' DNA-binding domain CKQ53_RS14610 PF01297 Zinc-uptake complex component A periplasmic CKQ53_RS14615 PF00005 ABC transporter CKQ53_RS14620 PF00950 ABC 3 transport family CKQ53_RS14625 PF00950 ABC 3 transport family CKQ53_RS14630 PF03881 Fructosamine kinase CKQ53_RS14635 PF14002 YniB-like protein CKQ53_RS14640 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS14645 PF00107 Zinc-binding dehydrogenase CKQ53_RS14645 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS14650 PF04307 LexA-binding, inner membrane-associated putative hydrolase CKQ53_RS14655 PF00375 Sodium:dicarboxylate symporter family CKQ53_RS14660 PF04355 SmpA / OmlA family CKQ53_RS14665 PF02540 NAD synthase CKQ53_RS14670 PF11756 Nitrous oxide-stimulated promoter CKQ53_RS14675 PF00216 Bacterial DNA-binding protein CKQ53_RS14680 PF03484 tRNA synthetase B5 domain CKQ53_RS14680 PF03147 Ferredoxin-fold anticodon binding domain CKQ53_RS14680 PF01588 Putative tRNA binding domain CKQ53_RS14680 PF03483 B3/4 domain CKQ53_RS14680 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CKQ53_RS14685 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CKQ53_RS14685 PF01409 tRNA synthetases class II core domain (F) CKQ53_RS14690 PF00453 Ribosomal protein L20 CKQ53_RS14695 PF01632 Ribosomal protein L35 CKQ53_RS14700 PF05198 Translation initiation factor IF-3, N-terminal domain CKQ53_RS14700 PF00707 Translation initiation factor IF-3, C-terminal domain CKQ53_RS14705 PF02824 TGS domain CKQ53_RS14705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKQ53_RS14705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CKQ53_RS14705 PF03129 Anticodon binding domain CKQ53_RS14710 PF13974 YebO-like protein CKQ53_RS14715 PF01435 Peptidase family M48 CKQ53_RS14725 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS14725 PF03707 Bacterial signalling protein N terminal repeat CKQ53_RS14725 PF00563 EAL domain CKQ53_RS14730 PF00180 Isocitrate/isopropylmalate dehydrogenase CKQ53_RS14735 PF00849 RNA pseudouridylate synthase CKQ53_RS14740 PF00293 NUDIX domain CKQ53_RS14750 PF04356 Protein of unknown function (DUF489) CKQ53_RS14755 PF00206 Lyase CKQ53_RS14755 PF08328 Adenylosuccinate lyase C-terminal CKQ53_RS14760 PF00072 Response regulator receiver domain CKQ53_RS14760 PF00486 Transcriptional regulatory protein, C terminal CKQ53_RS14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS14765 PF08918 PhoQ Sensor CKQ53_RS14770 PF08007 Cupin superfamily protein CKQ53_RS14775 PF07687 Peptidase dimerisation domain CKQ53_RS14775 PF01546 Peptidase family M20/M25/M40 CKQ53_RS14785 PF07670 Nucleoside recognition CKQ53_RS14785 PF02421 Ferrous iron transport protein B CKQ53_RS14785 PF17910 FeoB cytosolic helical domain CKQ53_RS14785 PF07664 Ferrous iron transport protein B C terminus CKQ53_RS14800 PF03572 Peptidase family S41 CKQ53_RS14800 PF11818 C-terminal domain of tail specific protease (DUF3340) CKQ53_RS14800 PF17804 Tail specific protease N-terminal domain CKQ53_RS14800 PF00595 PDZ domain CKQ53_RS14805 PF04352 ProQ/FINO family CKQ53_RS14805 PF17516 ProQ C-terminal domain CKQ53_RS14810 PF13185 GAF domain CKQ53_RS14815 PF01189 16S rRNA methyltransferase RsmB/F CKQ53_RS14815 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CKQ53_RS14815 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CKQ53_RS14820 PF07358 Protein of unknown function (DUF1482) CKQ53_RS14835 PF01713 Smr domain CKQ53_RS14840 PF07690 Major Facilitator Superfamily CKQ53_RS14845 PF04606 Ogr/Delta-like zinc finger CKQ53_RS14850 PF01979 Amidohydrolase family CKQ53_RS14855 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS14855 PF13185 GAF domain CKQ53_RS14855 PF00563 EAL domain CKQ53_RS14895 PF10709 Protein of unknown function (DUF2511) CKQ53_RS14900 PF00210 Ferritin-like domain CKQ53_RS14905 PF06440 DNA polymerase III, theta subunit CKQ53_RS14910 PF02222 ATP-grasp domain CKQ53_RS14915 PF13086 AAA domain CKQ53_RS14915 PF13087 AAA domain CKQ53_RS14915 PF13195 Protein of unknown function (DUF4011) CKQ53_RS14920 PF01081 KDPG and KHG aldolase CKQ53_RS14925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CKQ53_RS14925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CKQ53_RS14930 PF01380 SIS domain CKQ53_RS14930 PF01418 Helix-turn-helix domain, rpiR family CKQ53_RS14935 PF00224 Pyruvate kinase, barrel domain CKQ53_RS14935 PF02887 Pyruvate kinase, alpha/beta domain CKQ53_RS14945 PF03279 Bacterial lipid A biosynthesis acyltransferase CKQ53_RS14950 PF01476 LysM domain CKQ53_RS14950 PF01551 Peptidase family M23 CKQ53_RS14950 PF08525 Opacity-associated protein A N-terminal motif CKQ53_RS14955 PF01297 Zinc-uptake complex component A periplasmic CKQ53_RS14960 PF00005 ABC transporter CKQ53_RS14965 PF00950 ABC 3 transport family CKQ53_RS14970 PF17864 RuvB AAA lid domain CKQ53_RS14970 PF05491 RuvB C-terminal winged helix domain CKQ53_RS14970 PF05496 Holliday junction DNA helicase RuvB P-loop domain CKQ53_RS14975 PF01330 RuvA N terminal domain CKQ53_RS14975 PF07499 RuvA, C-terminal domain CKQ53_RS14980 PF02075 Crossover junction endodeoxyribonuclease RuvC CKQ53_RS14985 PF01709 Transcriptional regulator CKQ53_RS14990 PF00293 NUDIX domain CKQ53_RS14995 PF01336 OB-fold nucleic acid binding domain CKQ53_RS14995 PF00152 tRNA synthetases class II (D, K and N) CKQ53_RS14995 PF02938 GAD domain CKQ53_RS15000 PF00857 Isochorismatase family CKQ53_RS15005 PF01904 Protein of unknown function DUF72 CKQ53_RS15010 PF01124 MAPEG family CKQ53_RS15015 PF13649 Methyltransferase domain CKQ53_RS15020 PF08003 Protein of unknown function (DUF1698) CKQ53_RS15025 PF03932 CutC family CKQ53_RS15030 PF06185 YecM protein CKQ53_RS15035 PF03485 Arginyl tRNA synthetase N terminal domain CKQ53_RS15035 PF05746 DALR anticodon binding domain CKQ53_RS15035 PF00750 tRNA synthetases class I (R) CKQ53_RS15040 PF03023 Lipid II flippase MurJ CKQ53_RS15045 PF13302 Acetyltransferase (GNAT) domain CKQ53_RS15050 PF07690 Major Facilitator Superfamily CKQ53_RS15055 PF04399 Glutaredoxin 2, C terminal domain CKQ53_RS15055 PF13417 Glutathione S-transferase, N-terminal domain CKQ53_RS15060 PF07273 Protein of unknown function (DUF1439) CKQ53_RS15065 PF02613 Nitrate reductase delta subunit CKQ53_RS15070 PF02811 PHP domain CKQ53_RS15095 PF00795 Carbon-nitrogen hydrolase CKQ53_RS15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS15100 PF03466 LysR substrate binding domain CKQ53_RS15105 PF13722 5TM C-terminal transporter carbon starvation CstA CKQ53_RS15105 PF02554 Carbon starvation protein CstA CKQ53_RS15110 PF04328 Selenoprotein, putative CKQ53_RS15115 PF02492 CobW/HypB/UreG, nucleotide-binding domain CKQ53_RS15115 PF07683 Cobalamin synthesis protein cobW C-terminal domain CKQ53_RS15120 PF04397 LytTr DNA-binding domain CKQ53_RS15120 PF00072 Response regulator receiver domain CKQ53_RS15125 PF07694 5TMR of 5TMR-LYT CKQ53_RS15125 PF06580 Histidine kinase CKQ53_RS15130 PF04310 MukB N-terminal CKQ53_RS15130 PF16330 MukB hinge domain CKQ53_RS15135 PF04288 MukE-like family CKQ53_RS15140 PF17192 MukF middle domain CKQ53_RS15140 PF17193 MukF C-terminal domain CKQ53_RS15140 PF03882 MukF winged-helix domain CKQ53_RS15150 PF02698 DUF218 domain CKQ53_RS15155 PF01636 Phosphotransferase enzyme family CKQ53_RS15160 PF13229 Right handed beta helix region CKQ53_RS15165 PF02348 Cytidylyltransferase CKQ53_RS15170 PF03966 Trm112p-like protein CKQ53_RS15175 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CKQ53_RS15180 PF00664 ABC transporter transmembrane region CKQ53_RS15180 PF00005 ABC transporter CKQ53_RS15195 PF00753 Metallo-beta-lactamase superfamily CKQ53_RS15195 PF03772 Competence protein CKQ53_RS15200 PF04363 Protein of unknown function (DUF496) CKQ53_RS15205 PF02754 Cysteine-rich domain CKQ53_RS15210 PF02589 LUD domain CKQ53_RS15210 PF13183 4Fe-4S dicluster domain CKQ53_RS15210 PF11870 Domain of unknown function (DUF3390) CKQ53_RS15215 PF02589 LUD domain CKQ53_RS15220 PF00929 Exonuclease CKQ53_RS15220 PF08411 Exonuclease C-terminal CKQ53_RS15225 PF13520 Amino acid permease CKQ53_RS15230 PF07317 Flagellar regulator YcgR CKQ53_RS15230 PF07238 PilZ domain CKQ53_RS15235 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CKQ53_RS15240 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CKQ53_RS15245 PF04223 Citrate lyase, alpha subunit (CitF) CKQ53_RS15250 PF03328 HpcH/HpaI aldolase/citrate lyase family CKQ53_RS15255 PF06857 Malonate decarboxylase delta subunit (MdcD) CKQ53_RS15260 PF08218 Citrate lyase ligase C-terminal domain CKQ53_RS15265 PF01557 Fumarylacetoacetate (FAA) hydrolase family CKQ53_RS15270 PF03390 2-hydroxycarboxylate transporter family CKQ53_RS15275 PF17203 Single cache domain 3 CKQ53_RS15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS15285 PF01370 NAD dependent epimerase/dehydratase family CKQ53_RS15290 PF08029 HisG, C-terminal domain CKQ53_RS15290 PF01634 ATP phosphoribosyltransferase CKQ53_RS15295 PF00815 Histidinol dehydrogenase CKQ53_RS15300 PF00155 Aminotransferase class I and II CKQ53_RS15305 PF00475 Imidazoleglycerol-phosphate dehydratase CKQ53_RS15310 PF00117 Glutamine amidotransferase class-I CKQ53_RS15315 PF00977 Histidine biosynthesis protein CKQ53_RS15320 PF00977 Histidine biosynthesis protein CKQ53_RS15325 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CKQ53_RS15325 PF01502 Phosphoribosyl-AMP cyclohydrolase CKQ53_RS15330 PF00216 Bacterial DNA-binding protein CKQ53_RS15335 PF00575 S1 RNA binding domain CKQ53_RS15340 PF02224 Cytidylate kinase CKQ53_RS15345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CKQ53_RS15350 PF00266 Aminotransferase class-V CKQ53_RS15355 PF18381 YcaO cyclodehydratase C-terminal domain CKQ53_RS15355 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CKQ53_RS15360 PF01226 Formate/nitrite transporter CKQ53_RS15365 PF01228 Glycine radical CKQ53_RS15365 PF02901 Pyruvate formate lyase-like CKQ53_RS15375 PF04055 Radical SAM superfamily CKQ53_RS15380 PF07690 Major Facilitator Superfamily CKQ53_RS15385 PF02403 Seryl-tRNA synthetase N-terminal domain CKQ53_RS15385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CKQ53_RS15390 PF00004 ATPase family associated with various cellular activities (AAA) CKQ53_RS15390 PF12002 MgsA AAA+ ATPase C terminal CKQ53_RS15390 PF16193 AAA C-terminal domain CKQ53_RS15395 PF03548 Outer membrane lipoprotein carrier protein LolA CKQ53_RS15400 PF09397 Ftsk gamma domain CKQ53_RS15400 PF17854 FtsK alpha domain CKQ53_RS15400 PF01580 FtsK/SpoIIIE family CKQ53_RS15400 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CKQ53_RS15405 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS15410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS15415 PF00664 ABC transporter transmembrane region CKQ53_RS15415 PF00005 ABC transporter CKQ53_RS15420 PF00664 ABC transporter transmembrane region CKQ53_RS15420 PF00005 ABC transporter CKQ53_RS15425 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CKQ53_RS15430 PF01176 Translation initiation factor 1A / IF-1 CKQ53_RS15435 PF01204 Trehalase CKQ53_RS15445 PF02617 ATP-dependent Clp protease adaptor protein ClpS CKQ53_RS15450 PF00313 'Cold-shock' DNA-binding domain CKQ53_RS15460 PF11398 Protein of unknown function (DUF2813) CKQ53_RS15465 PF03956 Lysine exporter LysO CKQ53_RS15470 PF01510 N-acetylmuramoyl-L-alanine amidase CKQ53_RS15475 PF01906 Putative heavy-metal-binding CKQ53_RS15480 PF00005 ABC transporter CKQ53_RS15485 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15500 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS15505 PF05958 tRNA (Uracil-5-)-methyltransferase CKQ53_RS15510 PF10767 Protein of unknown function (DUF2593) CKQ53_RS15515 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15520 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15525 PF00005 ABC transporter CKQ53_RS15525 PF08402 TOBE domain CKQ53_RS15530 PF13416 Bacterial extracellular solute-binding protein CKQ53_RS15535 PF10722 Putative bacterial sensory transduction regulator CKQ53_RS15540 PF00881 Nitroreductase family CKQ53_RS15545 PF00462 Glutaredoxin CKQ53_RS15555 PF06826 Predicted Permease Membrane Region CKQ53_RS15555 PF02080 TrkA-C domain CKQ53_RS15560 PF08220 DeoR-like helix-turn-helix domain CKQ53_RS15560 PF00455 DeoR C terminal sensor domain CKQ53_RS15565 PF07943 Penicillin-binding protein 5, C-terminal domain CKQ53_RS15565 PF00768 D-alanyl-D-alanine carboxypeptidase CKQ53_RS15570 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15575 PF09383 NIL domain CKQ53_RS15575 PF00005 ABC transporter CKQ53_RS15580 PF03180 NLPA lipoprotein CKQ53_RS15585 PF00043 Glutathione S-transferase, C-terminal domain CKQ53_RS15585 PF13417 Glutathione S-transferase, N-terminal domain CKQ53_RS15590 PF18693 TRAM domain CKQ53_RS15590 PF00919 Uncharacterized protein family UPF0004 CKQ53_RS15590 PF04055 Radical SAM superfamily CKQ53_RS15595 PF02698 DUF218 domain CKQ53_RS15600 PF04235 Protein of unknown function (DUF418) CKQ53_RS15605 PF01227 GTP cyclohydrolase I CKQ53_RS15610 PF02203 Tar ligand binding domain homologue CKQ53_RS15610 PF00672 HAMP domain CKQ53_RS15610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS15615 PF02203 Tar ligand binding domain homologue CKQ53_RS15615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS15615 PF00672 HAMP domain CKQ53_RS15625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKQ53_RS15630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS15630 PF03466 LysR substrate binding domain CKQ53_RS15635 PF00107 Zinc-binding dehydrogenase CKQ53_RS15635 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS15640 PF00756 Putative esterase CKQ53_RS15650 PF00465 Iron-containing alcohol dehydrogenase CKQ53_RS15655 PF00005 ABC transporter CKQ53_RS15660 PF02653 Branched-chain amino acid transport system / permease component CKQ53_RS15665 PF07690 Major Facilitator Superfamily CKQ53_RS15670 PF00324 Amino acid permease CKQ53_RS15675 PF03466 LysR substrate binding domain CKQ53_RS15675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS15680 PF03601 Conserved hypothetical protein 698 CKQ53_RS15685 PF01261 Xylose isomerase-like TIM barrel CKQ53_RS15690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CKQ53_RS15690 PF02378 Phosphotransferase system, EIIC CKQ53_RS15695 PF00294 pfkB family carbohydrate kinase CKQ53_RS15700 PF00381 PTS HPr component phosphorylation site CKQ53_RS15700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKQ53_RS15705 PF07690 Major Facilitator Superfamily CKQ53_RS15710 PF03692 Putative zinc- or iron-chelating domain CKQ53_RS15715 PF08207 Elongation factor P (EF-P) KOW-like domain CKQ53_RS15715 PF01132 Elongation factor P (EF-P) OB domain CKQ53_RS15715 PF09285 Elongation factor P, C-terminal CKQ53_RS15720 PF02492 CobW/HypB/UreG, nucleotide-binding domain CKQ53_RS15720 PF07683 Cobalamin synthesis protein cobW C-terminal domain CKQ53_RS15725 PF01569 PAP2 superfamily CKQ53_RS15730 PF00877 NlpC/P60 family CKQ53_RS15735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS15740 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15745 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS15745 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15750 PF00005 ABC transporter CKQ53_RS15750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS15755 PF13989 YejG-like protein CKQ53_RS15760 PF07690 Major Facilitator Superfamily CKQ53_RS15765 PF01479 S4 domain CKQ53_RS15765 PF00849 RNA pseudouridylate synthase CKQ53_RS15770 PF04851 Type III restriction enzyme, res subunit CKQ53_RS15770 PF00271 Helicase conserved C-terminal domain CKQ53_RS15775 PF01386 Ribosomal L25p family CKQ53_RS15780 PF07690 Major Facilitator Superfamily CKQ53_RS15785 PF00072 Response regulator receiver domain CKQ53_RS15785 PF04397 LytTr DNA-binding domain CKQ53_RS15790 PF07694 5TMR of 5TMR-LYT CKQ53_RS15790 PF06580 Histidine kinase CKQ53_RS15790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS15795 PF04245 37-kD nucleoid-associated bacterial protein CKQ53_RS15800 PF07208 Protein of unknown function (DUF1414) CKQ53_RS15805 PF00884 Sulfatase CKQ53_RS15805 PF11893 Domain of unknown function (DUF3413) CKQ53_RS15815 PF00313 'Cold-shock' DNA-binding domain CKQ53_RS15820 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CKQ53_RS15825 PF00561 alpha/beta hydrolase fold CKQ53_RS15830 PF00313 'Cold-shock' DNA-binding domain CKQ53_RS15835 PF06942 GlpM protein CKQ53_RS15840 PF11127 Protein of unknown function (DUF2892) CKQ53_RS15840 PF00581 Rhodanese-like domain CKQ53_RS15845 PF13505 Outer membrane protein beta-barrel domain CKQ53_RS15850 PF00210 Ferritin-like domain CKQ53_RS15855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS15865 PF00005 ABC transporter CKQ53_RS15870 PF01569 PAP2 superfamily CKQ53_RS15880 PF02885 Glycosyl transferase family, helical bundle domain CKQ53_RS15885 PF06733 DEAD_2 CKQ53_RS15885 PF13307 Helicase C-terminal domain CKQ53_RS15900 PF14310 Fibronectin type III-like domain CKQ53_RS15900 PF01915 Glycosyl hydrolase family 3 C-terminal domain CKQ53_RS15900 PF00933 Glycosyl hydrolase family 3 N terminal domain CKQ53_RS15905 PF00202 Aminotransferase class-III CKQ53_RS15915 PF00455 DeoR C terminal sensor domain CKQ53_RS15915 PF08220 DeoR-like helix-turn-helix domain CKQ53_RS15920 PF00043 Glutathione S-transferase, C-terminal domain CKQ53_RS15920 PF13417 Glutathione S-transferase, N-terminal domain CKQ53_RS15925 PF00768 D-alanyl-D-alanine carboxypeptidase CKQ53_RS15930 PF02677 Epoxyqueuosine reductase QueH CKQ53_RS15935 PF01928 CYTH domain CKQ53_RS15940 PF01207 Dihydrouridine synthase (Dus) CKQ53_RS15945 PF12833 Helix-turn-helix domain CKQ53_RS15945 PF14525 AraC-binding-like domain CKQ53_RS15950 PF00892 EamA-like transporter family CKQ53_RS15955 PF00270 DEAD/DEAH box helicase CKQ53_RS15955 PF00271 Helicase conserved C-terminal domain CKQ53_RS15960 PF13091 PLD-like domain CKQ53_RS15965 PF03706 Lysylphosphatidylglycerol synthase TM region CKQ53_RS15970 PF01027 Inhibitor of apoptosis-promoting Bax1 CKQ53_RS15975 PF02391 MoaE protein CKQ53_RS15980 PF02597 ThiS family CKQ53_RS15985 PF01967 MoaC family CKQ53_RS15990 PF00994 Probable molybdopterin binding domain CKQ53_RS15995 PF04055 Radical SAM superfamily CKQ53_RS15995 PF06463 Molybdenum Cofactor Synthesis C CKQ53_RS16000 PF01933 Uncharacterised protein family UPF0052 CKQ53_RS16010 PF00005 ABC transporter CKQ53_RS16015 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16020 PF09084 NMT1/THI5 like CKQ53_RS16025 PF00107 Zinc-binding dehydrogenase CKQ53_RS16025 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS16040 PF00501 AMP-binding enzyme CKQ53_RS16040 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS16050 PF04851 Type III restriction enzyme, res subunit CKQ53_RS16050 PF00271 Helicase conserved C-terminal domain CKQ53_RS16050 PF02151 UvrB/uvrC motif CKQ53_RS16050 PF12344 Ultra-violet resistance protein B CKQ53_RS16050 PF17757 UvrB interaction domain CKQ53_RS16060 PF08241 Methyltransferase domain CKQ53_RS16065 PF00155 Aminotransferase class I and II CKQ53_RS16070 PF06968 Biotin and Thiamin Synthesis associated domain CKQ53_RS16070 PF04055 Radical SAM superfamily CKQ53_RS16075 PF00202 Aminotransferase class-III CKQ53_RS16080 PF03788 LrgA family CKQ53_RS16085 PF04172 LrgB-like family CKQ53_RS16090 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CKQ53_RS16090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CKQ53_RS16095 PF03949 Malic enzyme, NAD binding domain CKQ53_RS16095 PF00390 Malic enzyme, N-terminal domain CKQ53_RS16100 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16100 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS16105 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS16115 PF00005 ABC transporter CKQ53_RS16115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS16120 PF03453 MoeA N-terminal region (domain I and II) CKQ53_RS16120 PF03454 MoeA C-terminal region (domain IV) CKQ53_RS16120 PF00994 Probable molybdopterin binding domain CKQ53_RS16125 PF00899 ThiF family CKQ53_RS16135 PF03358 NADPH-dependent FMN reductase CKQ53_RS16140 PF00781 Diacylglycerol kinase catalytic domain CKQ53_RS16145 PF01679 Proteolipid membrane potential modulator CKQ53_RS16175 PF00005 ABC transporter CKQ53_RS16175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS16185 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS16185 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16190 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS16200 PF07729 FCD domain CKQ53_RS16200 PF00392 Bacterial regulatory proteins, gntR family CKQ53_RS16210 PF02626 Carboxyltransferase domain, subdomain A and B CKQ53_RS16230 PF03746 LamB/YcsF family CKQ53_RS16245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CKQ53_RS16245 PF00205 Thiamine pyrophosphate enzyme, central domain CKQ53_RS16245 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CKQ53_RS16320 PF16338 Domain of unknown function (DUF4968) CKQ53_RS16320 PF17137 Domain of unknown function (DUF5110) CKQ53_RS16320 PF13802 Galactose mutarotase-like CKQ53_RS16320 PF01055 Glycosyl hydrolases family 31 CKQ53_RS16325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS16325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKQ53_RS16330 PF01717 Cobalamin-independent synthase, Catalytic domain CKQ53_RS16340 PF01066 CDP-alcohol phosphatidyltransferase CKQ53_RS16345 PF01541 GIY-YIG catalytic domain CKQ53_RS16345 PF02151 UvrB/uvrC motif CKQ53_RS16345 PF08459 UvrC Helix-hairpin-helix N-terminal CKQ53_RS16350 PF00072 Response regulator receiver domain CKQ53_RS16350 PF00196 Bacterial regulatory proteins, luxR family CKQ53_RS16355 PF10769 Protein of unknown function (DUF2594) CKQ53_RS16365 PF00324 Amino acid permease CKQ53_RS16370 PF03466 LysR substrate binding domain CKQ53_RS16370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS16390 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS16395 PF04227 Indigoidine synthase A like protein CKQ53_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS16415 PF03466 LysR substrate binding domain CKQ53_RS16420 PF13276 HTH-like domain CKQ53_RS16420 PF13683 Integrase core domain CKQ53_RS16425 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS16430 PF01042 Endoribonuclease L-PSP CKQ53_RS16445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKQ53_RS16450 PF00455 DeoR C terminal sensor domain CKQ53_RS16450 PF08220 DeoR-like helix-turn-helix domain CKQ53_RS16455 PF00202 Aminotransferase class-III CKQ53_RS16465 PF00106 short chain dehydrogenase CKQ53_RS16475 PF01425 Amidase CKQ53_RS16480 PF07690 Major Facilitator Superfamily CKQ53_RS16485 PF02311 AraC-like ligand binding domain CKQ53_RS16485 PF12833 Helix-turn-helix domain CKQ53_RS16490 PF00795 Carbon-nitrogen hydrolase CKQ53_RS16505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CKQ53_RS16505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CKQ53_RS16510 PF00941 FAD binding domain in molybdopterin dehydrogenase CKQ53_RS16510 PF03450 CO dehydrogenase flavoprotein C-terminal domain CKQ53_RS16520 PF01979 Amidohydrolase family CKQ53_RS16525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CKQ53_RS16525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CKQ53_RS16530 PF13478 XdhC Rossmann domain CKQ53_RS16530 PF02625 XdhC and CoxI family CKQ53_RS16535 PF01979 Amidohydrolase family CKQ53_RS16540 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS16545 PF02954 Bacterial regulatory protein, Fis family CKQ53_RS16545 PF13188 PAS domain CKQ53_RS16545 PF00158 Sigma-54 interaction domain CKQ53_RS16550 PF12804 MobA-like NTP transferase domain CKQ53_RS16555 PF00111 2Fe-2S iron-sulfur cluster binding domain CKQ53_RS16555 PF01799 [2Fe-2S] binding domain CKQ53_RS16565 PF00795 Carbon-nitrogen hydrolase CKQ53_RS16570 PF07687 Peptidase dimerisation domain CKQ53_RS16570 PF01546 Peptidase family M20/M25/M40 CKQ53_RS16575 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16580 PF00005 ABC transporter CKQ53_RS16590 PF02685 Glucokinase CKQ53_RS16590 PF01418 Helix-turn-helix domain, rpiR family CKQ53_RS16590 PF01380 SIS domain CKQ53_RS16605 PF00083 Sugar (and other) transporter CKQ53_RS16615 PF00561 alpha/beta hydrolase fold CKQ53_RS16620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKQ53_RS16620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS16625 PF13417 Glutathione S-transferase, N-terminal domain CKQ53_RS16625 PF00043 Glutathione S-transferase, C-terminal domain CKQ53_RS16630 PF07519 Tannase and feruloyl esterase CKQ53_RS16635 PF16884 N-terminal domain of oxidoreductase CKQ53_RS16635 PF00107 Zinc-binding dehydrogenase CKQ53_RS16640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CKQ53_RS16650 PF00296 Luciferase-like monooxygenase CKQ53_RS16665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CKQ53_RS16665 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CKQ53_RS16670 PF01914 MarC family integral membrane protein CKQ53_RS16685 PF00107 Zinc-binding dehydrogenase CKQ53_RS16685 PF08240 Alcohol dehydrogenase GroES-like domain CKQ53_RS16690 PF11658 Cellulose biosynthesis protein BcsG CKQ53_RS16700 PF10995 Cellulose biosynthesis GIL CKQ53_RS16715 PF00535 Glycosyl transferase family 2 CKQ53_RS16715 PF07238 PilZ domain CKQ53_RS16715 PF03552 Cellulose synthase CKQ53_RS16720 PF03170 Bacterial cellulose synthase subunit CKQ53_RS16725 PF01270 Glycosyl hydrolases family 8 CKQ53_RS16730 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CKQ53_RS16735 PF12792 CSS motif domain associated with EAL CKQ53_RS16735 PF00563 EAL domain CKQ53_RS16740 PF00842 Alanine racemase, C-terminal domain CKQ53_RS16740 PF01168 Alanine racemase, N-terminal domain CKQ53_RS16745 PF01757 Acyltransferase family CKQ53_RS16750 PF00155 Aminotransferase class I and II CKQ53_RS16755 PF01568 Molydopterin dinucleotide binding domain CKQ53_RS16755 PF00384 Molybdopterin oxidoreductase CKQ53_RS16770 PF16295 Tetracyclin repressor-like, C-terminal domain CKQ53_RS16770 PF00440 Bacterial regulatory proteins, tetR family CKQ53_RS16775 PF07690 Major Facilitator Superfamily CKQ53_RS16780 PF04216 Protein involved in formate dehydrogenase formation CKQ53_RS16785 PF09400 Protein of unknown function (DUF2002) CKQ53_RS16790 PF00958 GMP synthase C terminal domain CKQ53_RS16790 PF00117 Glutamine amidotransferase class-I CKQ53_RS16795 PF00005 ABC transporter CKQ53_RS16795 PF12848 ABC transporter CKQ53_RS16800 PF02567 Phenazine biosynthesis-like protein CKQ53_RS16805 PF05957 Bacterial protein of unknown function (DUF883) CKQ53_RS16810 PF00361 Proton-conducting membrane transporter CKQ53_RS16815 PF00361 Proton-conducting membrane transporter CKQ53_RS16820 PF00361 Proton-conducting membrane transporter CKQ53_RS16820 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CKQ53_RS16825 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CKQ53_RS16830 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CKQ53_RS16835 PF12838 4Fe-4S dicluster domain CKQ53_RS16840 PF00146 NADH dehydrogenase CKQ53_RS16845 PF00384 Molybdopterin oxidoreductase CKQ53_RS16845 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CKQ53_RS16845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CKQ53_RS16845 PF01568 Molydopterin dinucleotide binding domain CKQ53_RS16850 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CKQ53_RS16850 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CKQ53_RS16850 PF10531 SLBB domain CKQ53_RS16860 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CKQ53_RS16860 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CKQ53_RS16865 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CKQ53_RS16870 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CKQ53_RS16875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS16875 PF03466 LysR substrate binding domain CKQ53_RS16880 PF00155 Aminotransferase class I and II CKQ53_RS16890 PF02080 TrkA-C domain CKQ53_RS16890 PF03600 Citrate transporter CKQ53_RS16895 PF13419 Haloacid dehalogenase-like hydrolase CKQ53_RS16900 PF03887 YfbU domain CKQ53_RS16905 PF04217 Protein of unknown function, DUF412 CKQ53_RS16910 PF00871 Acetokinase family CKQ53_RS16915 PF07085 DRTGG domain CKQ53_RS16915 PF01515 Phosphate acetyl/butaryl transferase CKQ53_RS16920 PF00293 NUDIX domain CKQ53_RS16925 PF12850 Calcineurin-like phosphoesterase superfamily domain CKQ53_RS16930 PF08338 Domain of unknown function (DUF1731) CKQ53_RS16930 PF01370 NAD dependent epimerase/dehydratase family CKQ53_RS16935 PF00005 ABC transporter CKQ53_RS16940 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS16950 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS16955 PF02441 Flavoprotein CKQ53_RS16960 PF00156 Phosphoribosyl transferase domain CKQ53_RS16965 PF02674 Colicin V production protein CKQ53_RS16970 PF05036 Sporulation related domain CKQ53_RS16975 PF02875 Mur ligase family, glutamate ligase domain CKQ53_RS16975 PF08245 Mur ligase middle domain CKQ53_RS16980 PF17848 Acetyl-coA carboxylase zinc finger domain CKQ53_RS16980 PF01039 Carboxyl transferase domain CKQ53_RS16985 PF09335 SNARE associated Golgi protein CKQ53_RS16990 PF01416 tRNA pseudouridine synthase CKQ53_RS16995 PF02774 Semialdehyde dehydrogenase, dimerisation domain CKQ53_RS16995 PF01118 Semialdehyde dehydrogenase, NAD binding domain CKQ53_RS17000 PF11890 Domain of unknown function (DUF3410) CKQ53_RS17000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CKQ53_RS17000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CKQ53_RS17010 PF02801 Beta-ketoacyl synthase, C-terminal domain CKQ53_RS17010 PF00109 Beta-ketoacyl synthase, N-terminal domain CKQ53_RS17015 PF01266 FAD dependent oxidoreductase CKQ53_RS17015 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CKQ53_RS17035 PF08891 YfcL protein CKQ53_RS17040 PF04315 Elongation factor P hydroxylase CKQ53_RS17045 PF01925 Sulfite exporter TauE/SafE CKQ53_RS17050 PF03411 Penicillin-insensitive murein endopeptidase CKQ53_RS17055 PF01264 Chorismate synthase CKQ53_RS17060 PF05175 Methyltransferase small domain CKQ53_RS17065 PF01713 Smr domain CKQ53_RS17070 PF00300 Histidine phosphatase superfamily (branch 1) CKQ53_RS17075 PF04175 Protein of unknown function (DUF406) CKQ53_RS17080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CKQ53_RS17085 PF06039 Malate:quinone oxidoreductase (Mqo) CKQ53_RS17090 PF04333 MlaA lipoprotein CKQ53_RS17095 PF01226 Formate/nitrite transporter CKQ53_RS17130 PF13417 Glutathione S-transferase, N-terminal domain CKQ53_RS17130 PF04399 Glutaredoxin 2, C terminal domain CKQ53_RS17135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS17135 PF03466 LysR substrate binding domain CKQ53_RS17140 PF07681 DoxX CKQ53_RS17145 PF02230 Phospholipase/Carboxylesterase CKQ53_RS17150 PF01497 Periplasmic binding protein CKQ53_RS17155 PF05977 Transmembrane secretion effector CKQ53_RS17160 PF01032 FecCD transport family CKQ53_RS17165 PF01032 FecCD transport family CKQ53_RS17170 PF00005 ABC transporter CKQ53_RS17175 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS17175 PF00550 Phosphopantetheine attachment site CKQ53_RS17175 PF00668 Condensation domain CKQ53_RS17175 PF00501 AMP-binding enzyme CKQ53_RS17180 PF03621 MbtH-like protein CKQ53_RS17185 PF11806 Domain of unknown function (DUF3327) CKQ53_RS17185 PF00756 Putative esterase CKQ53_RS17190 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS17190 PF00593 TonB dependent receptor CKQ53_RS17200 PF00425 chorismate binding enzyme CKQ53_RS17205 PF13193 AMP-binding enzyme C-terminal domain CKQ53_RS17205 PF00501 AMP-binding enzyme CKQ53_RS17210 PF00550 Phosphopantetheine attachment site CKQ53_RS17210 PF00857 Isochorismatase family CKQ53_RS17220 PF03061 Thioesterase superfamily CKQ53_RS17230 PF04073 Aminoacyl-tRNA editing domain CKQ53_RS17240 PF01478 Type IV leader peptidase family CKQ53_RS17240 PF06750 Bacterial Peptidase A24 N-terminal domain CKQ53_RS17245 PF04612 Type II secretion system (T2SS), protein M CKQ53_RS17250 PF05134 Type II secretion system (T2SS), protein L CKQ53_RS17250 PF12693 GspL periplasmic domain CKQ53_RS17255 PF03934 Type II secretion system (T2SS), protein K CKQ53_RS17260 PF07963 Prokaryotic N-terminal methylation motif CKQ53_RS17260 PF11612 Type II secretion system (T2SS), protein J CKQ53_RS17265 PF07963 Prokaryotic N-terminal methylation motif CKQ53_RS17265 PF02501 Type II secretion system (T2SS), protein I CKQ53_RS17270 PF07963 Prokaryotic N-terminal methylation motif CKQ53_RS17275 PF08334 Type II secretion system (T2SS), protein G CKQ53_RS17275 PF07963 Prokaryotic N-terminal methylation motif CKQ53_RS17280 PF00482 Type II secretion system (T2SS), protein F CKQ53_RS17285 PF00437 Type II/IV secretion system protein CKQ53_RS17290 PF00263 Bacterial type II and III secretion system protein CKQ53_RS17290 PF03958 Bacterial type II/III secretion system short domain CKQ53_RS17295 PF11356 Type II secretion system protein C CKQ53_RS17300 PF16537 Type II secretion system protein B CKQ53_RS17305 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CKQ53_RS17310 PF00155 Aminotransferase class I and II CKQ53_RS17320 PF13378 Enolase C-terminal domain-like CKQ53_RS17320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CKQ53_RS17325 PF01063 Amino-transferase class IV CKQ53_RS17335 PF00924 Mechanosensitive ion channel CKQ53_RS17335 PF12794 Mechanosensitive ion channel inner membrane domain 1 CKQ53_RS17335 PF12795 Mechanosensitive ion channel porin domain CKQ53_RS17350 PF13276 HTH-like domain CKQ53_RS17355 PF01527 Transposase CKQ53_RS17360 PF00535 Glycosyl transferase family 2 CKQ53_RS17365 PF04138 GtrA-like protein CKQ53_RS17370 PF07715 TonB-dependent Receptor Plug Domain CKQ53_RS17370 PF00593 TonB dependent receptor CKQ53_RS17375 PF02424 ApbE family CKQ53_RS17380 PF14537 Cytochrome c3 CKQ53_RS17380 PF00890 FAD binding domain CKQ53_RS17385 PF02203 Tar ligand binding domain homologue CKQ53_RS17385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CKQ53_RS17385 PF00672 HAMP domain CKQ53_RS17390 PF01037 Lrp/AsnC ligand binding domain CKQ53_RS17395 PF00291 Pyridoxal-phosphate dependent enzyme CKQ53_RS17400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CKQ53_RS17400 PF03466 LysR substrate binding domain CKQ53_RS17410 PF00005 ABC transporter CKQ53_RS17410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS17415 PF00005 ABC transporter CKQ53_RS17415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CKQ53_RS17420 PF12911 N-terminal TM domain of oligopeptide transport permease C CKQ53_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS17425 PF00528 Binding-protein-dependent transport system inner membrane component CKQ53_RS17430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CKQ53_RS17435 PF01810 LysE type translocator CKQ53_RS17440 PF00465 Iron-containing alcohol dehydrogenase CKQ53_RS17445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CKQ53_RS17445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CKQ53_RS17455 PF01406 tRNA synthetases class I (C) catalytic domain CKQ53_RS17455 PF09190 DALR domain CKQ53_RS17465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CKQ53_RS17470 PF00149 Calcineurin-like phosphoesterase CKQ53_RS17475 PF00731 AIR carboxylase CKQ53_RS17480 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CKQ53_RS17480 PF02222 ATP-grasp domain CKQ53_RS17490 PF13090 Polyphosphate kinase C-terminal domain 2 CKQ53_RS17490 PF17941 Polyphosphate kinase C-terminal domain 1 CKQ53_RS17490 PF02503 Polyphosphate kinase middle domain CKQ53_RS17490 PF13089 Polyphosphate kinase N-terminal domain CKQ53_RS17495 PF02541 Ppx/GppA phosphatase family CKQ53_RS17505 PF01258 Prokaryotic dksA/traR C4-type zinc finger CKQ53_RS17510 PF00582 Universal stress protein family CKQ53_RS17515 PF13811 Domain of unknown function (DUF4186) CKQ53_RS17520 PF00251 Glycosyl hydrolases family 32 N-terminal domain CKQ53_RS17520 PF08244 Glycosyl hydrolases family 32 C terminal CKQ53_RS17535 PF01027 Inhibitor of apoptosis-promoting Bax1 CKQ53_RS17540 PF04358 DsrC like protein CKQ53_RS17545 PF00708 Acylphosphatase CKQ53_RS17550 PF08755 Hemimethylated DNA-binding protein YccV like CKQ53_RS17555 PF13380 CoA binding domain CKQ53_RS17560 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) CKQ53_RS17565 PF02142 MGS-like domain CKQ53_RS17570 PF12462 DNA helicase IV / RNA helicase N terminal CKQ53_RS17570 PF00580 UvrD/REP helicase N-terminal domain CKQ53_RS17570 PF13361 UvrD-like helicase C-terminal domain CKQ53_RS17575 PF03733 Inner membrane component domain CKQ53_RS17580 PF12805 FUSC-like inner membrane protein yccS CKQ53_RS17585 PF04994 TfoX C-terminal domain CKQ53_RS17585 PF04993 TfoX N-terminal domain CKQ53_RS17590 PF03846 Cell division inhibitor SulA CKQ53_RS17595 PF01389 OmpA-like transmembrane domain CKQ53_RS17595 PF00691 OmpA family CKQ53_RS17600 PF00248 Aldo/keto reductase family CKQ53_RS17605 PF01773 Na+ dependent nucleoside transporter N-terminus CKQ53_RS17605 PF07662 Na+ dependent nucleoside transporter C-terminus CKQ53_RS17605 PF07670 Nucleoside recognition CKQ53_RS17610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKQ53_RS17615 PF00873 AcrB/AcrD/AcrF family CKQ53_RS17620 PF00873 AcrB/AcrD/AcrF family CKQ53_RS17625 PF13409 Glutathione S-transferase, N-terminal domain CKQ53_RS17630 PF16325 Peptidase family U32 C-terminal domain CKQ53_RS17630 PF01136 Peptidase family U32 CKQ53_RS17635 PF00781 Diacylglycerol kinase catalytic domain CKQ53_RS17640 PF06146 Phosphate-starvation-inducible E CKQ53_RS17645 PF08543 Phosphomethylpyrimidine kinase CKQ53_RS17650 PF02110 Hydroxyethylthiazole kinase family CKQ53_RS17655 PF05068 Mannitol repressor CKQ53_RS17660 PF08125 Mannitol dehydrogenase C-terminal domain CKQ53_RS17660 PF01232 Mannitol dehydrogenase Rossmann domain CKQ53_RS17665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CKQ53_RS17665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CKQ53_RS17665 PF02378 Phosphotransferase system, EIIC CKQ53_RS17690 PF04717 Type VI secretion system, phage-baseplate injector CKQ53_RS17695 PF05638 Type VI secretion system effector, Hcp CKQ53_RS17700 PF00529 HlyD membrane-fusion protein of T1SS CKQ53_RS17700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CKQ53_RS17705 PF07690 Major Facilitator Superfamily CKQ53_RS17710 PF02321 Outer membrane efflux protein CKQ53_RS17715 PF12706 Beta-lactamase superfamily domain CKQ53_RS17730 PF00782 Dual specificity phosphatase, catalytic domain CKQ53_RS17735 PF12146 Serine aminopeptidase, S33 CKQ53_RS17735 PF12147 Putative methyltransferase CKQ53_RS17745 PF01066 CDP-alcohol phosphatidyltransferase CKQ53_RS17760 PF00665 Integrase core domain CKQ53_RS17760 PF13333 Integrase core domain CKQ53_RS17760 PF13276 HTH-like domain CKQ53_RS17770 PF00117 Glutamine amidotransferase class-I CKQ53_RS17770 PF00958 GMP synthase C terminal domain CKQ53_RS17770 PF02540 NAD synthase CKQ53_RS17775 PF00571 CBS domain CKQ53_RS17775 PF00478 IMP dehydrogenase / GMP reductase domain CKQ53_RS17780 PF13742 OB-fold nucleic acid binding domain CKQ53_RS17780 PF02601 Exonuclease VII, large subunit CKQ53_RS17785 PF01447 Thermolysin metallopeptidase, catalytic domain CKQ53_RS17785 PF02868 Thermolysin metallopeptidase, alpha-helical domain CKQ53_RS17785 PF16485 Protealysin propeptide CKQ53_RS17795 PF07191 zinc-ribbons CKQ53_RS17800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CKQ53_RS17800 PF01926 50S ribosome-binding GTPase CKQ53_RS17805 PF13360 PQQ-like domain CKQ53_RS17810 PF09976 Tetratricopeptide repeat-like domain CKQ53_RS17815 PF03129 Anticodon binding domain CKQ53_RS17815 PF13393 Histidyl-tRNA synthetase CKQ53_RS17820 PF04551 GcpE protein CKQ53_RS17825 PF13464 Domain of unknown function (DUF4115) CKQ53_RS17835 PF04055 Radical SAM superfamily CKQ53_RS17840 PF00334 Nucleoside diphosphate kinase CKQ53_RS17845 PF00581 Rhodanese-like domain CKQ53_RS17850 PF14581 SseB protein C-terminal domain CKQ53_RS17850 PF07179 SseB protein N-terminal domain CKQ53_RS17855 PF00883 Cytosol aminopeptidase family, catalytic domain CKQ53_RS17855 PF12404 Peptidase CKQ53_RS17860 PF00266 Aminotransferase class-V CKQ53_RS17865 PF02082 Transcriptional regulator CKQ53_RS17870 PF00588 SpoU rRNA Methylase family CKQ53_RS17875 PF00459 Inositol monophosphatase family CKQ53_RS17880 PF01497 Periplasmic binding protein CKQ53_RS17885 PF01032 FecCD transport family CKQ53_RS17890 PF00005 ABC transporter CKQ53_RS17895 PF03824 High-affinity nickel-transport protein CKQ53_RS17900 PF06226 Protein of unknown function (DUF1007) CKQ53_RS17905 PF12832 MFS_1 like family CKQ53_RS17910 PF00464 Serine hydroxymethyltransferase CKQ53_RS17920 PF00544 Pectate lyase CKQ53_RS17925 PF00544 Pectate lyase CKQ53_RS17930 PF00543 Nitrogen regulatory protein P-II CKQ53_RS17935 PF00158 Sigma-54 interaction domain CKQ53_RS17935 PF00072 Response regulator receiver domain CKQ53_RS17940 PF13942 YfhG lipoprotein CKQ53_RS17945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CKQ53_RS17945 PF00512 His Kinase A (phospho-acceptor) domain CKQ53_RS17950 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CKQ53_RS17950 PF02769 AIR synthase related protein, C-terminal domain CKQ53_RS17950 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CKQ53_RS17955 PF01464 Transglycosylase SLT domain CKQ53_RS17955 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS17960 PF14437 MafB19-like deaminase CKQ53_RS17970 PF13580 SIS domain CKQ53_RS17980 PF13188 PAS domain CKQ53_RS17980 PF03707 Bacterial signalling protein N terminal repeat CKQ53_RS17980 PF00563 EAL domain CKQ53_RS17980 PF00990 Diguanylate cyclase, GGDEF domain CKQ53_RS18000 PF00005 ABC transporter CKQ53_RS18000 PF00664 ABC transporter transmembrane region CKQ53_RS18000 PF03412 Peptidase C39 family CKQ53_RS18005 PF00529 HlyD membrane-fusion protein of T1SS CKQ53_RS18015 PF00563 EAL domain CKQ53_RS18020 PF01497 Periplasmic binding protein CKQ53_RS18030 PF12838 4Fe-4S dicluster domain CKQ53_RS18050 PF07650 KH domain CKQ53_RS18050 PF01926 50S ribosome-binding GTPase CKQ53_RS18055 PF00035 Double-stranded RNA binding motif CKQ53_RS18055 PF14622 Ribonuclease-III-like CKQ53_RS18060 PF10502 Signal peptidase, peptidase S26 CKQ53_RS18070 PF17188 MucB/RseB C-terminal domain CKQ53_RS18070 PF03888 MucB/RseB N-terminal domain CKQ53_RS18075 PF03873 Anti sigma-E protein RseA, C-terminal domain CKQ53_RS18075 PF03872 Anti sigma-E protein RseA, N-terminal domain CKQ53_RS18080 PF08281 Sigma-70, region 4 CKQ53_RS18080 PF04542 Sigma-70 region 2 CKQ53_RS18085 PF05175 Methyltransferase small domain CKQ53_RS18090 PF00270 DEAD/DEAH box helicase CKQ53_RS18090 PF00271 Helicase conserved C-terminal domain CKQ53_RS18095 PF01228 Glycine radical CKQ53_RS18100 PF03167 Uracil DNA glycosylase superfamily CKQ53_RS18115 PF00749 tRNA synthetases class I (E and Q), catalytic domain CKQ53_RS18145 PF02796 Helix-turn-helix domain of resolvase CKQ53_RS18145 PF00239 Resolvase, N terminal domain CKQ53_RS18150 PF07484 Phage Tail Collar Domain CKQ53_RS18155 PF02413 Caudovirales tail fibre assembly protein, lambda gpK CKQ53_RS18285 PF00497 Bacterial extracellular solute-binding proteins, family 3 CKQ53_RS18285 PF01464 Transglycosylase SLT domain CKQ53_RS18325 PF01471 Putative peptidoglycan binding domain CKQ53_RS18325 PF13401 AAA domain