locus-tag class description C1N55_RS00005 PF11638 DnaA N-terminal domain C1N55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C1N55_RS00005 PF00308 Bacterial dnaA protein C1N55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C1N55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C1N55_RS00010 PF02767 DNA polymerase III beta subunit, central domain C1N55_RS00020 PF02463 RecF/RecN/SMC N terminal domain C1N55_RS00025 PF01751 Toprim domain C1N55_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus C1N55_RS00025 PF00204 DNA gyrase B C1N55_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A C1N55_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller C1N55_RS00065 PF00478 IMP dehydrogenase / GMP reductase domain C1N55_RS00065 PF00571 CBS domain C1N55_RS00070 PF07943 Penicillin-binding protein 5, C-terminal domain C1N55_RS00070 PF00768 D-alanyl-D-alanine carboxypeptidase C1N55_RS00075 PF13537 Glutamine amidotransferase domain C1N55_RS00075 PF00733 Asparagine synthase C1N55_RS00080 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS00080 PF00155 Aminotransferase class I and II C1N55_RS00085 PF01680 SOR/SNZ family C1N55_RS00090 PF01174 SNO glutamine amidotransferase family C1N55_RS00095 PF02403 Seryl-tRNA synthetase N-terminal domain C1N55_RS00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1N55_RS00100 PF02667 Short chain fatty acid transporter C1N55_RS00105 PF00155 Aminotransferase class I and II C1N55_RS00115 PF14437 MafB19-like deaminase C1N55_RS00120 PF01712 Deoxynucleoside kinase C1N55_RS00125 PF01712 Deoxynucleoside kinase C1N55_RS00135 PF00005 ABC transporter C1N55_RS00140 PF12706 Beta-lactamase superfamily domain C1N55_RS00145 PF03641 Possible lysine decarboxylase C1N55_RS00155 PF03737 Aldolase/RraA C1N55_RS00160 PF00375 Sodium:dicarboxylate symporter family C1N55_RS00180 PF00005 ABC transporter C1N55_RS00195 PF07726 ATPase family associated with various cellular activities (AAA) C1N55_RS00195 PF17863 AAA lid domain C1N55_RS00215 PF12169 DNA polymerase III subunits gamma and tau domain III C1N55_RS00220 PF02575 YbaB/EbfC DNA-binding family C1N55_RS00225 PF02132 RecR protein C1N55_RS00225 PF13662 Toprim domain C1N55_RS00265 PF03845 Spore germination protein C1N55_RS00270 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS00290 PF01048 Phosphorylase superfamily C1N55_RS00295 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C1N55_RS00295 PF01276 Orn/Lys/Arg decarboxylase, major domain C1N55_RS00300 PF02223 Thymidylate kinase C1N55_RS00305 PF06153 Cyclic-di-AMP receptor C1N55_RS00310 PF03885 Protein of unknown function (DUF327) C1N55_RS00315 PF09115 DNA polymerase III, delta subunit, C terminal C1N55_RS00320 PF04468 PSP1 C-terminal conserved region C1N55_RS00325 PF06156 Initiation control protein YabA C1N55_RS00330 PF05175 Methyltransferase small domain C1N55_RS00335 PF01541 GIY-YIG catalytic domain C1N55_RS00340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1N55_RS00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C1N55_RS00345 PF18277 AbrB C-terminal domain C1N55_RS00350 PF01588 Putative tRNA binding domain C1N55_RS00350 PF09334 tRNA synthetases class I (M) C1N55_RS00350 PF08264 Anticodon-binding domain of tRNA C1N55_RS00355 PF01026 TatD related DNase C1N55_RS00360 PF03990 G5-linked-Ubiquitin-like domain C1N55_RS00360 PF06725 3D domain C1N55_RS00360 PF07501 G5 domain C1N55_RS00365 PF13331 Domain of unknown function (DUF4093) C1N55_RS00365 PF13662 Toprim domain C1N55_RS00370 PF00398 Ribosomal RNA adenine dimethylase C1N55_RS00375 PF06257 Biofilm formation stimulator VEG C1N55_RS00380 PF00269 Small, acid-soluble spore proteins, alpha/beta type C1N55_RS00385 PF08544 GHMP kinases C terminal C1N55_RS00385 PF00288 GHMP kinases N terminal domain C1N55_RS00390 PF00156 Phosphoribosyl transferase domain C1N55_RS00390 PF09182 Bacterial purine repressor, N-terminal C1N55_RS00395 PF01042 Endoribonuclease L-PSP C1N55_RS00400 PF04026 SpoVG C1N55_RS00405 PF00483 Nucleotidyl transferase C1N55_RS00405 PF00132 Bacterial transferase hexapeptide (six repeats) C1N55_RS00410 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C1N55_RS00410 PF14572 Phosphoribosyl synthetase-associated domain C1N55_RS00415 PF14693 Ribosomal protein TL5, C-terminal domain C1N55_RS00415 PF01386 Ribosomal L25p family C1N55_RS00420 PF01195 Peptidyl-tRNA hydrolase C1N55_RS00430 PF03461 TRCF domain C1N55_RS00430 PF17757 UvrB interaction domain C1N55_RS00430 PF00270 DEAD/DEAH box helicase C1N55_RS00430 PF02559 CarD-like/TRCF domain C1N55_RS00430 PF00271 Helicase conserved C-terminal domain C1N55_RS00435 PF15714 Stage V sporulation protein T C-terminal, transcription factor C1N55_RS00435 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C1N55_RS00440 PF01943 Polysaccharide biosynthesis protein C1N55_RS00440 PF14667 Polysaccharide biosynthesis C-terminal domain C1N55_RS00445 PF03819 MazG nucleotide pyrophosphohydrolase domain C1N55_RS00445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1N55_RS00450 PF01479 S4 domain C1N55_RS00455 PF07873 YabP family C1N55_RS00465 PF04977 Septum formation initiator C1N55_RS00470 PF00575 S1 RNA binding domain C1N55_RS00485 PF00156 Phosphoribosyl transferase domain C1N55_RS00485 PF01171 PP-loop family C1N55_RS00485 PF11734 TilS substrate C-terminal domain C1N55_RS00490 PF00156 Phosphoribosyl transferase domain C1N55_RS00495 PF00004 ATPase family associated with various cellular activities (AAA) C1N55_RS00495 PF06480 FtsH Extracellular C1N55_RS00495 PF01434 Peptidase family M41 C1N55_RS00495 PF17862 AAA+ lid domain C1N55_RS00500 PF03309 Type III pantothenate kinase C1N55_RS00505 PF01430 Hsp33 protein C1N55_RS00515 PF00291 Pyridoxal-phosphate dependent enzyme C1N55_RS00525 PF00809 Pterin binding enzyme C1N55_RS00530 PF02152 Dihydroneopterin aldolase C1N55_RS00535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C1N55_RS00540 PF01207 Dihydrouridine synthase (Dus) C1N55_RS00545 PF05163 DinB family C1N55_RS00550 PF00152 tRNA synthetases class II (D, K and N) C1N55_RS00550 PF01336 OB-fold nucleic acid binding domain C1N55_RS00630 PF17932 Tetracyclin repressor-like, C-terminal domain C1N55_RS00630 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS00640 PF00072 Response regulator receiver domain C1N55_RS00640 PF04397 LytTr DNA-binding domain C1N55_RS00645 PF00463 Isocitrate lyase family C1N55_RS00650 PF01274 Malate synthase C1N55_RS00655 PF00266 Aminotransferase class-V C1N55_RS00665 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS00665 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS00670 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS00675 PF00005 ABC transporter C1N55_RS00675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS00680 PF01979 Amidohydrolase family C1N55_RS00680 PF13382 Adenine deaminase C-terminal domain C1N55_RS00700 PF14698 Argininosuccinate lyase C-terminal C1N55_RS00700 PF00206 Lyase C1N55_RS00715 PF00294 pfkB family carbohydrate kinase C1N55_RS00720 PF04239 Protein of unknown function (DUF421) C1N55_RS00730 PF13244 Domain of unknown function (DUF4040) C1N55_RS00730 PF00361 Proton-conducting membrane transporter C1N55_RS00730 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1N55_RS00735 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C1N55_RS00740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1N55_RS00745 PF00361 Proton-conducting membrane transporter C1N55_RS00750 PF01899 Na+/H+ ion antiporter subunit C1N55_RS00755 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C1N55_RS00760 PF03334 Na+/H+ antiporter subunit C1N55_RS00770 PF00005 ABC transporter C1N55_RS00785 PF00149 Calcineurin-like phosphoesterase C1N55_RS00790 PF13302 Acetyltransferase (GNAT) domain C1N55_RS00795 PF01411 tRNA synthetases class II (A) C1N55_RS00795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1N55_RS00795 PF02272 DHHA1 domain C1N55_RS00800 PF02608 ABC transporter substrate-binding protein PnrA-like C1N55_RS00805 PF00672 HAMP domain C1N55_RS00805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS00805 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS00820 PF04542 Sigma-70 region 2 C1N55_RS00820 PF08281 Sigma-70, region 4 C1N55_RS00845 PF00293 NUDIX domain C1N55_RS00855 PF02515 CoA-transferase family III C1N55_RS00875 PF06628 Catalase-related immune-responsive C1N55_RS00875 PF00199 Catalase C1N55_RS00880 PF00872 Transposase, Mutator family C1N55_RS00885 PF02898 Nitric oxide synthase, oxygenase domain C1N55_RS00895 PF07690 Major Facilitator Superfamily C1N55_RS00900 PF00324 Amino acid permease C1N55_RS00910 PF00156 Phosphoribosyl transferase domain C1N55_RS00915 PF00860 Permease family C1N55_RS00920 PF00294 pfkB family carbohydrate kinase C1N55_RS00925 PF10415 Fumarase C C-terminus C1N55_RS00925 PF00206 Lyase C1N55_RS00930 PF04143 Sulphur transport C1N55_RS00935 PF01206 Sulfurtransferase TusA C1N55_RS00945 PF06908 YspA SLOG family C1N55_RS00950 PF00202 Aminotransferase class-III C1N55_RS00955 PF13426 PAS domain C1N55_RS00955 PF00158 Sigma-54 interaction domain C1N55_RS00955 PF02954 Bacterial regulatory protein, Fis family C1N55_RS00960 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1N55_RS00960 PF04963 Sigma-54 factor, core binding domain C1N55_RS00960 PF04552 Sigma-54, DNA binding domain C1N55_RS00980 PF03176 MMPL family C1N55_RS01000 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C1N55_RS01000 PF13378 Enolase C-terminal domain-like C1N55_RS01025 PF00582 Universal stress protein family C1N55_RS01030 PF00916 Sulfate permease family C1N55_RS01030 PF01740 STAS domain C1N55_RS01050 PF00005 ABC transporter C1N55_RS01050 PF00664 ABC transporter transmembrane region C1N55_RS01055 PF01497 Periplasmic binding protein C1N55_RS01055 PF12833 Helix-turn-helix domain C1N55_RS01060 PF01497 Periplasmic binding protein C1N55_RS01065 PF01032 FecCD transport family C1N55_RS01070 PF01032 FecCD transport family C1N55_RS01075 PF00005 ABC transporter C1N55_RS01080 PF00756 Putative esterase C1N55_RS01085 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS01085 PF00563 EAL domain C1N55_RS01085 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS01095 PF00069 Protein kinase domain C1N55_RS01095 PF08239 Bacterial SH3 domain C1N55_RS01110 PF00083 Sugar (and other) transporter C1N55_RS01115 PF00474 Sodium:solute symporter family C1N55_RS01145 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS01155 PF03741 Integral membrane protein TerC family C1N55_RS01160 PF17853 GGDEF-like domain C1N55_RS01160 PF13556 PucR C-terminal helix-turn-helix domain C1N55_RS01190 PF00085 Thioredoxin C1N55_RS01195 PF01551 Peptidase family M23 C1N55_RS01200 PF04264 YceI-like domain C1N55_RS01205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS01210 PF03358 NADPH-dependent FMN reductase C1N55_RS01215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS01220 PF01613 Flavin reductase like domain C1N55_RS01225 PF01738 Dienelactone hydrolase family C1N55_RS01330 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS01365 PF00080 Copper/zinc superoxide dismutase (SODC) C1N55_RS01370 PF16868 NMT1-like family C1N55_RS01385 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) C1N55_RS01390 PF01546 Peptidase family M20/M25/M40 C1N55_RS01390 PF07687 Peptidase dimerisation domain C1N55_RS01395 PF13378 Enolase C-terminal domain-like C1N55_RS01395 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C1N55_RS01420 PF11188 Protein of unknown function (DUF2975) C1N55_RS01425 PF13443 Cro/C1-type HTH DNA-binding domain C1N55_RS01445 PF13536 Putative multidrug resistance efflux transporter C1N55_RS01450 PF01546 Peptidase family M20/M25/M40 C1N55_RS01450 PF07687 Peptidase dimerisation domain C1N55_RS01465 PF00881 Nitroreductase family C1N55_RS01470 PF02660 Glycerol-3-phosphate acyltransferase C1N55_RS01475 PF01053 Cys/Met metabolism PLP-dependent enzyme C1N55_RS01485 PF04542 Sigma-70 region 2 C1N55_RS01485 PF08281 Sigma-70, region 4 C1N55_RS01495 PF03447 Homoserine dehydrogenase, NAD binding domain C1N55_RS01495 PF00742 Homoserine dehydrogenase C1N55_RS01500 PF12728 Helix-turn-helix domain C1N55_RS01505 PF00892 EamA-like transporter family C1N55_RS01510 PF01047 MarR family C1N55_RS01515 PF02566 OsmC-like protein C1N55_RS01520 PF00255 Glutathione peroxidase C1N55_RS01525 PF00072 Response regulator receiver domain C1N55_RS01525 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS01530 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS01540 PF02673 Bacitracin resistance protein BacA C1N55_RS01545 PF07486 Cell Wall Hydrolase C1N55_RS01550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS01560 PF00171 Aldehyde dehydrogenase family C1N55_RS01565 PF16653 Saccharopine dehydrogenase C-terminal domain C1N55_RS01565 PF03435 Saccharopine dehydrogenase NADP binding domain C1N55_RS01575 PF01522 Polysaccharide deacetylase C1N55_RS01575 PF11738 Protein of unknown function (DUF3298) C1N55_RS01575 PF13739 Deacetylase PdaC C1N55_RS01585 PF12821 Threonine/Serine exporter, ThrE C1N55_RS01590 PF13426 PAS domain C1N55_RS01590 PF00563 EAL domain C1N55_RS01590 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS01595 PF00664 ABC transporter transmembrane region C1N55_RS01595 PF00005 ABC transporter C1N55_RS01600 PF00664 ABC transporter transmembrane region C1N55_RS01600 PF00005 ABC transporter C1N55_RS01605 PF00583 Acetyltransferase (GNAT) family C1N55_RS01610 PF01040 UbiA prenyltransferase family C1N55_RS01615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS01625 PF00248 Aldo/keto reductase family C1N55_RS01630 PF00296 Luciferase-like monooxygenase C1N55_RS01645 PF01032 FecCD transport family C1N55_RS01650 PF01032 FecCD transport family C1N55_RS01660 PF13180 PDZ domain C1N55_RS01660 PF17820 PDZ domain C1N55_RS01665 PF00893 Small Multidrug Resistance protein C1N55_RS01670 PF00893 Small Multidrug Resistance protein C1N55_RS01690 PF02834 LigT like Phosphoesterase C1N55_RS01695 PF00583 Acetyltransferase (GNAT) family C1N55_RS01700 PF17773 UPF0176 acylphosphatase like domain C1N55_RS01700 PF00581 Rhodanese-like domain C1N55_RS01705 PF00581 Rhodanese-like domain C1N55_RS01705 PF01206 Sulfurtransferase TusA C1N55_RS01710 PF13538 UvrD-like helicase C-terminal domain C1N55_RS01730 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS01730 PF13977 BetI-type transcriptional repressor, C-terminal C1N55_RS01735 PF03009 Glycerophosphoryl diester phosphodiesterase family C1N55_RS01745 PF12671 Putative amidase domain C1N55_RS01750 PF00881 Nitroreductase family C1N55_RS01755 PF03176 MMPL family C1N55_RS01765 PF08125 Mannitol dehydrogenase C-terminal domain C1N55_RS01765 PF01232 Mannitol dehydrogenase Rossmann domain C1N55_RS01770 PF13419 Haloacid dehalogenase-like hydrolase C1N55_RS01790 PF00005 ABC transporter C1N55_RS01795 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS01805 PF01425 Amidase C1N55_RS01810 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1N55_RS01820 PF02417 Chromate transporter C1N55_RS01825 PF02417 Chromate transporter C1N55_RS01830 PF13454 FAD-NAD(P)-binding C1N55_RS01835 PF00576 HIUase/Transthyretin family C1N55_RS01840 PF09349 OHCU decarboxylase C1N55_RS01840 PF01014 Uricase C1N55_RS01845 PF00860 Permease family C1N55_RS01850 PF17853 GGDEF-like domain C1N55_RS01850 PF07905 Purine catabolism regulatory protein-like family C1N55_RS01850 PF13556 PucR C-terminal helix-turn-helix domain C1N55_RS01855 PF01546 Peptidase family M20/M25/M40 C1N55_RS01860 PF00266 Aminotransferase class-V C1N55_RS01865 PF01979 Amidohydrolase family C1N55_RS01870 PF13614 AAA domain C1N55_RS01890 PF17151 Periplasmic sensor domain C1N55_RS01890 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS01895 PF02342 TerD domain C1N55_RS01900 PF02342 TerD domain C1N55_RS01905 PF02342 TerD domain C1N55_RS01910 PF03741 Integral membrane protein TerC family C1N55_RS01925 PF15608 PELOTA RNA binding domain C1N55_RS01925 PF11202 Phosphoribosyl transferase (PRTase) C1N55_RS01935 PF02342 TerD domain C1N55_RS01940 PF00188 Cysteine-rich secretory protein family C1N55_RS01945 PF10138 vWA found in TerF C terminus C1N55_RS01950 PF10138 vWA found in TerF C terminus C1N55_RS01985 PF00106 short chain dehydrogenase C1N55_RS01995 PF12833 Helix-turn-helix domain C1N55_RS01995 PF02805 Metal binding domain of Ada C1N55_RS02000 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain C1N55_RS02000 PF00730 HhH-GPD superfamily base excision DNA repair protein C1N55_RS02005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1N55_RS02005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1N55_RS02010 PF01022 Bacterial regulatory protein, arsR family C1N55_RS02035 PF02558 Ketopantoate reductase PanE/ApbA C1N55_RS02035 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1N55_RS02055 PF08450 SMP-30/Gluconolactonase/LRE-like region C1N55_RS02090 PF00772 DnaB-like helicase N terminal domain C1N55_RS02090 PF03796 DnaB-like helicase C terminal domain C1N55_RS02100 PF03852 DNA mismatch endonuclease Vsr C1N55_RS02125 PF02976 DNA mismatch repair enzyme MutH C1N55_RS02130 PF00145 C-5 cytosine-specific DNA methylase C1N55_RS02140 PF08378 Nuclease-related domain C1N55_RS02155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS02155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS02155 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS02165 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS02170 PF16868 NMT1-like family C1N55_RS02180 PF02515 CoA-transferase family III C1N55_RS02215 PF05593 RHS Repeat C1N55_RS02220 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS02225 PF10057 Uncharacterized conserved protein (DUF2294) C1N55_RS02255 PF12832 MFS_1 like family C1N55_RS02275 PF05504 Spore germination B3/ GerAC like, C-terminal C1N55_RS02280 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS02285 PF08281 Sigma-70, region 4 C1N55_RS02285 PF04542 Sigma-70 region 2 C1N55_RS02295 PF04229 GrpB protein C1N55_RS02305 PF00072 Response regulator receiver domain C1N55_RS02305 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS02310 PF02386 Cation transport protein C1N55_RS02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS02330 PF02082 Transcriptional regulator C1N55_RS02370 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS02370 PF00072 Response regulator receiver domain C1N55_RS02375 PF00672 HAMP domain C1N55_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS02375 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS02415 PF00144 Beta-lactamase C1N55_RS02435 PF07690 Major Facilitator Superfamily C1N55_RS02440 PF01497 Periplasmic binding protein C1N55_RS02445 PF01032 FecCD transport family C1N55_RS02450 PF01032 FecCD transport family C1N55_RS02455 PF00005 ABC transporter C1N55_RS02475 PF03553 Na+/H+ antiporter family C1N55_RS02525 PF02082 Transcriptional regulator C1N55_RS02530 PF13460 NAD(P)H-binding C1N55_RS02540 PF01479 S4 domain C1N55_RS02540 PF00579 tRNA synthetases class I (W and Y) C1N55_RS02545 PF06445 GyrI-like small molecule binding domain C1N55_RS02545 PF13411 MerR HTH family regulatory protein C1N55_RS02550 PF07690 Major Facilitator Superfamily C1N55_RS02555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS02555 PF02743 Cache domain C1N55_RS02555 PF00672 HAMP domain C1N55_RS02565 PF00005 ABC transporter C1N55_RS02580 PF13673 Acetyltransferase (GNAT) domain C1N55_RS02585 PF01047 MarR family C1N55_RS02590 PF00583 Acetyltransferase (GNAT) family C1N55_RS02605 PF00324 Amino acid permease C1N55_RS02620 PF00471 Ribosomal protein L33 C1N55_RS02625 PF07683 Cobalamin synthesis protein cobW C-terminal domain C1N55_RS02625 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1N55_RS02635 PF13411 MerR HTH family regulatory protein C1N55_RS02645 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS02645 PF00155 Aminotransferase class I and II C1N55_RS02650 PF07690 Major Facilitator Superfamily C1N55_RS02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS02670 PF07730 Histidine kinase C1N55_RS02675 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS02675 PF00072 Response regulator receiver domain C1N55_RS02680 PF05552 Conserved TM helix C1N55_RS02690 PF01361 Tautomerase enzyme C1N55_RS02695 PF06779 Uncharacterised MFS-type transporter YbfB C1N55_RS02700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS02700 PF03466 LysR substrate binding domain C1N55_RS02705 PF13460 NAD(P)H-binding C1N55_RS02720 PF02632 BioY family C1N55_RS02735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS02735 PF03466 LysR substrate binding domain C1N55_RS02740 PF00072 Response regulator receiver domain C1N55_RS02740 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS02745 PF00005 ABC transporter C1N55_RS02755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS02755 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS02765 PF00005 ABC transporter C1N55_RS02780 PF00892 EamA-like transporter family C1N55_RS02785 PF12833 Helix-turn-helix domain C1N55_RS02785 PF02311 AraC-like ligand binding domain C1N55_RS02795 PF00583 Acetyltransferase (GNAT) family C1N55_RS02810 PF03851 UV-endonuclease UvdE C1N55_RS02820 PF00293 NUDIX domain C1N55_RS02835 PF00583 Acetyltransferase (GNAT) family C1N55_RS02840 PF12867 DinB superfamily C1N55_RS02855 PF07729 FCD domain C1N55_RS02855 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS02860 PF00698 Acyl transferase domain C1N55_RS02865 PF16957 Malonate decarboxylase, alpha subunit, transporter C1N55_RS02870 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase C1N55_RS02875 PF06857 Malonate decarboxylase delta subunit (MdcD) C1N55_RS02880 PF01039 Carboxyl transferase domain C1N55_RS02885 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG C1N55_RS02900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS02900 PF00672 HAMP domain C1N55_RS02900 PF02743 Cache domain C1N55_RS02910 PF03466 LysR substrate binding domain C1N55_RS02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS02915 PF01717 Cobalamin-independent synthase, Catalytic domain C1N55_RS02920 PF07883 Cupin domain C1N55_RS02920 PF01381 Helix-turn-helix C1N55_RS02925 PF01810 LysE type translocator C1N55_RS02940 PF13344 Haloacid dehalogenase-like hydrolase C1N55_RS02940 PF00293 NUDIX domain C1N55_RS02950 PF00300 Histidine phosphatase superfamily (branch 1) C1N55_RS02960 PF02386 Cation transport protein C1N55_RS02965 PF02080 TrkA-C domain C1N55_RS02965 PF02254 TrkA-N domain C1N55_RS02990 PF04542 Sigma-70 region 2 C1N55_RS02990 PF08281 Sigma-70, region 4 C1N55_RS03015 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 C1N55_RS03020 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS03020 PF00072 Response regulator receiver domain C1N55_RS03025 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS03055 PF08448 PAS fold C1N55_RS03055 PF08447 PAS fold C1N55_RS03055 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS03055 PF00563 EAL domain C1N55_RS03070 PF12368 Rhodanase C-terminal C1N55_RS03070 PF00581 Rhodanese-like domain C1N55_RS03070 PF17773 UPF0176 acylphosphatase like domain C1N55_RS03075 PF01594 AI-2E family transporter C1N55_RS03085 PF04239 Protein of unknown function (DUF421) C1N55_RS03095 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS03095 PF00563 EAL domain C1N55_RS03095 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS03110 PF01026 TatD related DNase C1N55_RS03115 PF00005 ABC transporter C1N55_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS03130 PF09084 NMT1/THI5 like C1N55_RS03140 PF00583 Acetyltransferase (GNAT) family C1N55_RS03150 PF01381 Helix-turn-helix C1N55_RS03170 PF00005 ABC transporter C1N55_RS03180 PF03698 Uncharacterised protein family (UPF0180) C1N55_RS03190 PF01569 PAP2 superfamily C1N55_RS03210 PF01638 HxlR-like helix-turn-helix C1N55_RS03215 PF07690 Major Facilitator Superfamily C1N55_RS03220 PF00248 Aldo/keto reductase family C1N55_RS03230 PF00583 Acetyltransferase (GNAT) family C1N55_RS03240 PF16244 Domain of unknown function (DUF4901) C1N55_RS03245 PF13302 Acetyltransferase (GNAT) domain C1N55_RS03260 PF13302 Acetyltransferase (GNAT) domain C1N55_RS03270 PF00583 Acetyltransferase (GNAT) family C1N55_RS03290 PF10710 Protein of unknown function (DUF2512) C1N55_RS03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS03300 PF13419 Haloacid dehalogenase-like hydrolase C1N55_RS03305 PF00144 Beta-lactamase C1N55_RS03320 PF01183 Glycosyl hydrolases family 25 C1N55_RS03320 PF01471 Putative peptidoglycan binding domain C1N55_RS03330 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS03335 PF08240 Alcohol dehydrogenase GroES-like domain C1N55_RS03335 PF00107 Zinc-binding dehydrogenase C1N55_RS03340 PF03061 Thioesterase superfamily C1N55_RS03345 PF01925 Sulfite exporter TauE/SafE C1N55_RS03355 PF02728 Copper amine oxidase, N3 domain C1N55_RS03355 PF01179 Copper amine oxidase, enzyme domain C1N55_RS03360 PF13520 Amino acid permease C1N55_RS03380 PF13302 Acetyltransferase (GNAT) domain C1N55_RS03385 PF01757 Acyltransferase family C1N55_RS03400 PF03352 Methyladenine glycosylase C1N55_RS03405 PF05958 tRNA (Uracil-5-)-methyltransferase C1N55_RS03405 PF01938 TRAM domain C1N55_RS03415 PF04307 LexA-binding, inner membrane-associated putative hydrolase C1N55_RS03420 PF05675 Protein of unknown function (DUF817) C1N55_RS03425 PF00326 Prolyl oligopeptidase family C1N55_RS03435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS03440 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS03445 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS03450 PF00005 ABC transporter C1N55_RS03450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS03455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS03455 PF00005 ABC transporter C1N55_RS03460 PF07690 Major Facilitator Superfamily C1N55_RS03465 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS03465 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS03465 PF00563 EAL domain C1N55_RS03470 PF02801 Beta-ketoacyl synthase, C-terminal domain C1N55_RS03470 PF00109 Beta-ketoacyl synthase, N-terminal domain C1N55_RS03480 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C1N55_RS03485 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1N55_RS03490 PF09844 Uncharacterized conserved protein (COG2071) C1N55_RS03500 PF00857 Isochorismatase family C1N55_RS03505 PF08241 Methyltransferase domain C1N55_RS03515 PF05163 DinB family C1N55_RS03520 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS03520 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C1N55_RS03530 PF08240 Alcohol dehydrogenase GroES-like domain C1N55_RS03530 PF00107 Zinc-binding dehydrogenase C1N55_RS03540 PF02463 RecF/RecN/SMC N terminal domain C1N55_RS03560 PF08141 Small acid-soluble spore protein H family C1N55_RS03570 PF13302 Acetyltransferase (GNAT) domain C1N55_RS03580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS03580 PF02743 Cache domain C1N55_RS03580 PF00672 HAMP domain C1N55_RS03585 PF13419 Haloacid dehalogenase-like hydrolase C1N55_RS03595 PF05145 Transition state regulatory protein AbrB C1N55_RS03600 PF01040 UbiA prenyltransferase family C1N55_RS03610 PF07687 Peptidase dimerisation domain C1N55_RS03610 PF01546 Peptidase family M20/M25/M40 C1N55_RS03615 PF04542 Sigma-70 region 2 C1N55_RS03615 PF08281 Sigma-70, region 4 C1N55_RS03625 PF03960 ArsC family C1N55_RS03630 PF12848 ABC transporter C1N55_RS03630 PF00005 ABC transporter C1N55_RS03655 PF03358 NADPH-dependent FMN reductase C1N55_RS03660 PF01554 MatE C1N55_RS03670 PF02696 Uncharacterized ACR, YdiU/UPF0061 family C1N55_RS03680 PF02535 ZIP Zinc transporter C1N55_RS03690 PF02583 Metal-sensitive transcriptional repressor C1N55_RS03695 PF00403 Heavy-metal-associated domain C1N55_RS03700 PF00403 Heavy-metal-associated domain C1N55_RS03710 PF00155 Aminotransferase class I and II C1N55_RS03720 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS03720 PF03717 Penicillin-binding Protein dimerisation domain C1N55_RS03720 PF05223 NTF2-like N-terminal transpeptidase domain C1N55_RS03725 PF08281 Sigma-70, region 4 C1N55_RS03725 PF04542 Sigma-70 region 2 C1N55_RS03730 PF13739 Deacetylase PdaC C1N55_RS03730 PF11738 Protein of unknown function (DUF3298) C1N55_RS03735 PF01751 Toprim domain C1N55_RS03735 PF01131 DNA topoisomerase C1N55_RS03740 PF02690 Na+/Pi-cotransporter C1N55_RS03750 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1N55_RS03760 PF03480 Bacterial extracellular solute-binding protein, family 7 C1N55_RS03765 PF07883 Cupin domain C1N55_RS03770 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1N55_RS03780 PF01494 FAD binding domain C1N55_RS03785 PF01614 Bacterial transcriptional regulator C1N55_RS03785 PF09339 IclR helix-turn-helix domain C1N55_RS03795 PF04073 Aminoacyl-tRNA editing domain C1N55_RS03810 PF01381 Helix-turn-helix C1N55_RS03815 PF00155 Aminotransferase class I and II C1N55_RS03825 PF09383 NIL domain C1N55_RS03825 PF00005 ABC transporter C1N55_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS03835 PF03180 NLPA lipoprotein C1N55_RS03840 PF00155 Aminotransferase class I and II C1N55_RS03845 PF00795 Carbon-nitrogen hydrolase C1N55_RS03850 PF04239 Protein of unknown function (DUF421) C1N55_RS03860 PF11798 IMS family HHH motif C1N55_RS03860 PF11799 impB/mucB/samB family C-terminal domain C1N55_RS03860 PF00817 impB/mucB/samB family C1N55_RS03880 PF01370 NAD dependent epimerase/dehydratase family C1N55_RS03890 PF00290 Tryptophan synthase alpha chain C1N55_RS03895 PF00291 Pyridoxal-phosphate dependent enzyme C1N55_RS03900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C1N55_RS03905 PF00218 Indole-3-glycerol phosphate synthase C1N55_RS03910 PF02885 Glycosyl transferase family, helical bundle domain C1N55_RS03910 PF00591 Glycosyl transferase family, a/b domain C1N55_RS03925 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS03930 PF00005 ABC transporter C1N55_RS03945 PF00585 C-terminal regulatory domain of Threonine dehydratase C1N55_RS03945 PF00291 Pyridoxal-phosphate dependent enzyme C1N55_RS03950 PF07670 Nucleoside recognition C1N55_RS03955 PF02585 GlcNAc-PI de-N-acetylase C1N55_RS03960 PF08830 Protein of unknown function (DUF1806) C1N55_RS03965 PF08543 Phosphomethylpyrimidine kinase C1N55_RS03970 PF03167 Uracil DNA glycosylase superfamily C1N55_RS03985 PF04241 Protein of unknown function (DUF423) C1N55_RS03990 PF07687 Peptidase dimerisation domain C1N55_RS03990 PF01546 Peptidase family M20/M25/M40 C1N55_RS03995 PF09671 Spore coat protein (Spore_GerQ) C1N55_RS04005 PF06778 Chlorite dismutase C1N55_RS04010 PF03099 Biotin/lipoate A/B protein ligase family C1N55_RS04020 PF07293 Protein of unknown function (DUF1450) C1N55_RS04025 PF01966 HD domain C1N55_RS04030 PF01361 Tautomerase enzyme C1N55_RS04035 PF08741 YwhD family C1N55_RS04040 PF00912 Transglycosylase C1N55_RS04040 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS04045 PF00491 Arginase family C1N55_RS04055 PF05746 DALR anticodon binding domain C1N55_RS04055 PF03485 Arginyl tRNA synthetase N terminal domain C1N55_RS04055 PF00750 tRNA synthetases class I (R) C1N55_RS04060 PF09278 MerR, DNA binding C1N55_RS04060 PF00376 MerR family regulatory protein C1N55_RS04065 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS04065 PF00501 AMP-binding enzyme C1N55_RS04070 PF18158 Adaptive response protein AidB N-terminal domain C1N55_RS04070 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS04070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS04075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS04075 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS04075 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS04080 PF01032 FecCD transport family C1N55_RS04085 PF00005 ABC transporter C1N55_RS04090 PF01923 Cobalamin adenosyltransferase C1N55_RS04095 PF02754 Cysteine-rich domain C1N55_RS04095 PF13183 4Fe-4S dicluster domain C1N55_RS04100 PF02803 Thiolase, C-terminal domain C1N55_RS04100 PF00108 Thiolase, N-terminal domain C1N55_RS04105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1N55_RS04105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1N55_RS04110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS04110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS04110 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS04115 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS04115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS04115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS04120 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS04120 PF08359 YsiA-like protein, C-terminal region C1N55_RS04125 PF02310 B12 binding domain C1N55_RS04125 PF01642 Methylmalonyl-CoA mutase C1N55_RS04130 PF05066 HB1, ASXL, restriction endonuclease HTH domain C1N55_RS04135 PF00872 Transposase, Mutator family C1N55_RS04140 PF06418 CTP synthase N-terminus C1N55_RS04140 PF00117 Glutamine amidotransferase class-I C1N55_RS04150 PF00072 Response regulator receiver domain C1N55_RS04155 PF01116 Fructose-bisphosphate aldolase class-II C1N55_RS04160 PF00923 Transaldolase/Fructose-6-phosphate aldolase C1N55_RS04165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1N55_RS04170 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded C1N55_RS04175 PF07497 Rho termination factor, RNA-binding domain C1N55_RS04175 PF07498 Rho termination factor, N-terminal domain C1N55_RS04175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1N55_RS04180 PF01197 Ribosomal protein L31 C1N55_RS04185 PF00265 Thymidine kinase C1N55_RS04190 PF03462 PCRF domain C1N55_RS04190 PF00472 RF-1 domain C1N55_RS04195 PF17827 PrmC N-terminal domain C1N55_RS04195 PF13847 Methyltransferase domain C1N55_RS04200 PF09551 Stage II sporulation protein R (spore_II_R) C1N55_RS04205 PF01300 Telomere recombination C1N55_RS04205 PF03481 Putative GTP-binding controlling metal-binding C1N55_RS04215 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1N55_RS04220 PF02743 Cache domain C1N55_RS04220 PF00672 HAMP domain C1N55_RS04220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS04225 PF02502 Ribose/Galactose Isomerase C1N55_RS04230 PF04260 Protein of unknown function (DUF436) C1N55_RS04235 PF00464 Serine hydroxymethyltransferase C1N55_RS04245 PF02350 UDP-N-acetylglucosamine 2-epimerase C1N55_RS04250 PF03899 ATP synthase I chain C1N55_RS04255 PF00119 ATP synthase A chain C1N55_RS04260 PF00137 ATP synthase subunit C C1N55_RS04265 PF00430 ATP synthase B/B' CF(0) C1N55_RS04270 PF00213 ATP synthase delta (OSCP) subunit C1N55_RS04275 PF00306 ATP synthase alpha/beta chain, C terminal domain C1N55_RS04275 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1N55_RS04275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1N55_RS04280 PF00231 ATP synthase C1N55_RS04285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1N55_RS04285 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1N55_RS04290 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C1N55_RS04290 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C1N55_RS04295 PF06612 Protein of unknown function (DUF1146) C1N55_RS04300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1N55_RS04305 PF08486 Stage II sporulation protein C1N55_RS04315 PF12116 Stage III sporulation protein D C1N55_RS04325 PF00460 Flagella basal body rod protein C1N55_RS04325 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1N55_RS04330 PF00460 Flagella basal body rod protein C1N55_RS04330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1N55_RS04340 PF07977 FabA-like domain C1N55_RS04360 PF00436 Single-strand binding protein family C1N55_RS04365 PF00271 Helicase conserved C-terminal domain C1N55_RS04365 PF12419 SNF2 Helicase protein C1N55_RS04365 PF00176 SNF2 family N-terminal domain C1N55_RS04370 PF04434 SWIM zinc finger C1N55_RS04380 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1N55_RS04380 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1N55_RS04380 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1N55_RS04385 PF03808 Glycosyl transferase WecB/TagA/CpsF family C1N55_RS04390 PF00395 S-layer homology domain C1N55_RS04395 PF00395 S-layer homology domain C1N55_RS04395 PF00963 Cohesin domain C1N55_RS04400 PF01757 Acyltransferase family C1N55_RS04415 PF02554 Carbon starvation protein CstA C1N55_RS04440 PF00535 Glycosyl transferase family 2 C1N55_RS04460 PF08239 Bacterial SH3 domain C1N55_RS04460 PF01476 LysM domain C1N55_RS04460 PF00877 NlpC/P60 family C1N55_RS04465 PF01520 N-acetylmuramoyl-L-alanine amidase C1N55_RS04475 PF00395 S-layer homology domain C1N55_RS04480 PF02368 Bacterial Ig-like domain (group 2) C1N55_RS04480 PF00395 S-layer homology domain C1N55_RS04490 PF13439 Glycosyltransferase Family 4 C1N55_RS04490 PF00534 Glycosyl transferases group 1 C1N55_RS04495 PF03023 Lipid II flippase MurJ C1N55_RS04500 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS04505 PF00595 PDZ domain C1N55_RS04505 PF03572 Peptidase family S41 C1N55_RS04510 PF05525 Branched-chain amino acid transport protein C1N55_RS04515 PF00877 NlpC/P60 family C1N55_RS04515 PF01476 LysM domain C1N55_RS04525 PF01043 SecA preprotein cross-linking domain C1N55_RS04525 PF07516 SecA Wing and Scaffold domain C1N55_RS04525 PF07517 SecA DEAD-like domain C1N55_RS04530 PF00953 Glycosyl transferase family 4 C1N55_RS04535 PF03816 Cell envelope-related transcriptional attenuator domain C1N55_RS04540 PF01205 Uncharacterized protein family UPF0029 C1N55_RS04540 PF09186 Domain of unknown function (DUF1949) C1N55_RS04545 PF05384 Sensor protein DegS C1N55_RS04545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS04545 PF07730 Histidine kinase C1N55_RS04550 PF00072 Response regulator receiver domain C1N55_RS04550 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS04560 PF02645 Uncharacterised protein, DegV family COG1307 C1N55_RS04565 PF04851 Type III restriction enzyme, res subunit C1N55_RS04565 PF00271 Helicase conserved C-terminal domain C1N55_RS04580 PF04316 Anti-sigma-28 factor, FlgM C1N55_RS04590 PF00460 Flagella basal body rod protein C1N55_RS04590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1N55_RS04595 PF00669 Bacterial flagellin N-terminal helical region C1N55_RS04595 PF00700 Bacterial flagellin C-terminal helical region C1N55_RS04605 PF02623 FliW protein C1N55_RS04610 PF02599 Global regulator protein family C1N55_RS04615 PF00669 Bacterial flagellin N-terminal helical region C1N55_RS04615 PF00700 Bacterial flagellin C-terminal helical region C1N55_RS04640 PF02719 Polysaccharide biosynthesis protein C1N55_RS04645 PF00483 Nucleotidyl transferase C1N55_RS04650 PF03559 NDP-hexose 2,3-dehydratase C1N55_RS04655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1N55_RS04660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1N55_RS04665 PF16363 GDP-mannose 4,6 dehydratase C1N55_RS04675 PF00535 Glycosyl transferase family 2 C1N55_RS04690 PF01467 Cytidylyltransferase-like C1N55_RS04715 PF00501 AMP-binding enzyme C1N55_RS04715 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS04730 PF02348 Cytidylyltransferase C1N55_RS04740 PF03102 NeuB family C1N55_RS04740 PF08666 SAF domain C1N55_RS04745 PF16221 winged helix-turn-helix C1N55_RS04745 PF09940 Domain of unknown function (DUF2172) C1N55_RS04745 PF16254 Domain of unknown function (DUF4910) C1N55_RS04755 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1N55_RS04760 PF00342 Phosphoglucose isomerase C1N55_RS04765 PF03646 FlaG protein C1N55_RS04770 PF02465 Flagellar hook-associated protein 2 N-terminus C1N55_RS04770 PF07196 Flagellin hook IN motif C1N55_RS04770 PF07195 Flagellar hook-associated protein 2 C-terminus C1N55_RS04780 PF02561 Flagellar protein FliS C1N55_RS04790 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C1N55_RS04790 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C1N55_RS04795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C1N55_RS04820 PF00437 Type II/IV secretion system protein C1N55_RS04895 PF07517 SecA DEAD-like domain C1N55_RS04895 PF07516 SecA Wing and Scaffold domain C1N55_RS04895 PF01043 SecA preprotein cross-linking domain C1N55_RS04895 PF02810 SEC-C motif C1N55_RS04920 PF17757 UvrB interaction domain C1N55_RS04920 PF12344 Ultra-violet resistance protein B C1N55_RS04920 PF02151 UvrB/uvrC motif C1N55_RS04920 PF04851 Type III restriction enzyme, res subunit C1N55_RS04920 PF00271 Helicase conserved C-terminal domain C1N55_RS04925 PF17755 UvrA DNA-binding domain C1N55_RS04925 PF00005 ABC transporter C1N55_RS04925 PF17760 UvrA interaction domain C1N55_RS04930 PF13349 Putative adhesin C1N55_RS04935 PF00005 ABC transporter C1N55_RS04940 PF18075 FtsX extracellular domain C1N55_RS04940 PF02687 FtsX-like permease family C1N55_RS04945 PF04225 Opacity-associated protein A LysM-like domain C1N55_RS04945 PF01551 Peptidase family M23 C1N55_RS04950 PF00578 AhpC/TSA family C1N55_RS04955 PF17820 PDZ domain C1N55_RS04955 PF03572 Peptidase family S41 C1N55_RS04955 PF01471 Putative peptidoglycan binding domain C1N55_RS04960 PF17820 PDZ domain C1N55_RS04975 PF09335 SNARE associated Golgi protein C1N55_RS04980 PF12705 PD-(D/E)XK nuclease superfamily C1N55_RS04985 PF00580 UvrD/REP helicase N-terminal domain C1N55_RS04985 PF13361 UvrD-like helicase C-terminal domain C1N55_RS04985 PF12705 PD-(D/E)XK nuclease superfamily C1N55_RS04990 PF04235 Protein of unknown function (DUF418) C1N55_RS04995 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1N55_RS05000 PF07457 Protein of unknown function (DUF1516) C1N55_RS05005 PF00128 Alpha amylase, catalytic domain C1N55_RS05010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS05010 PF00005 ABC transporter C1N55_RS05015 PF00005 ABC transporter C1N55_RS05015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS05020 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS05025 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS05030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS05035 PF02645 Uncharacterised protein, DegV family COG1307 C1N55_RS05045 PF00326 Prolyl oligopeptidase family C1N55_RS05050 PF01883 Iron-sulfur cluster assembly protein C1N55_RS05055 PF00107 Zinc-binding dehydrogenase C1N55_RS05055 PF08240 Alcohol dehydrogenase GroES-like domain C1N55_RS05055 PF13823 Alcohol dehydrogenase GroES-associated C1N55_RS05060 PF00325 Bacterial regulatory proteins, crp family C1N55_RS05060 PF00027 Cyclic nucleotide-binding domain C1N55_RS05065 PF17871 AAA lid domain C1N55_RS05065 PF10431 C-terminal, D2-small domain, of ClpB protein C1N55_RS05065 PF02861 Clp amino terminal domain, pathogenicity island component C1N55_RS05065 PF00004 ATPase family associated with various cellular activities (AAA) C1N55_RS05065 PF07724 AAA domain (Cdc48 subfamily) C1N55_RS05075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1N55_RS05075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1N55_RS05080 PF00109 Beta-ketoacyl synthase, N-terminal domain C1N55_RS05080 PF02801 Beta-ketoacyl synthase, C-terminal domain C1N55_RS05090 PF00579 tRNA synthetases class I (W and Y) C1N55_RS05095 PF03960 ArsC family C1N55_RS05100 PF05389 Negative regulator of genetic competence (MecA) C1N55_RS05110 PF08439 Oligopeptidase F C1N55_RS05110 PF01432 Peptidase family M3 C1N55_RS05120 PF01152 Bacterial-like globin C1N55_RS05125 PF01464 Transglycosylase SLT domain C1N55_RS05125 PF01551 Peptidase family M23 C1N55_RS05125 PF10145 Phage-related minor tail protein C1N55_RS05130 PF01928 CYTH domain C1N55_RS05140 PF04607 Region found in RelA / SpoT proteins C1N55_RS05145 PF01513 ATP-NAD kinase C1N55_RS05150 PF00849 RNA pseudouridylate synthase C1N55_RS05155 PF00571 CBS domain C1N55_RS05155 PF01769 Divalent cation transporter C1N55_RS05155 PF03448 MgtE intracellular N domain C1N55_RS05175 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C1N55_RS05180 PF07451 Stage V sporulation protein AD (SpoVAD) C1N55_RS05185 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C1N55_RS05195 PF14069 Stage VI sporulation protein F C1N55_RS05200 PF13673 Acetyltransferase (GNAT) domain C1N55_RS05210 PF00756 Putative esterase C1N55_RS05215 PF04608 Phosphatidylglycerophosphatase A C1N55_RS05225 PF00171 Aldehyde dehydrogenase family C1N55_RS05230 PF05343 M42 glutamyl aminopeptidase C1N55_RS05235 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS05235 PF01225 Mur ligase family, catalytic domain C1N55_RS05235 PF08245 Mur ligase middle domain C1N55_RS05240 PF00009 Elongation factor Tu GTP binding domain C1N55_RS05240 PF03144 Elongation factor Tu domain 2 C1N55_RS05240 PF16658 Class II release factor RF3, C-terminal domain C1N55_RS05245 PF07993 Male sterility protein C1N55_RS05245 PF00550 Phosphopantetheine attachment site C1N55_RS05250 PF03741 Integral membrane protein TerC family C1N55_RS05255 PF02386 Cation transport protein C1N55_RS05260 PF13188 PAS domain C1N55_RS05260 PF00989 PAS fold C1N55_RS05260 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS05260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS05260 PF13426 PAS domain C1N55_RS05265 PF01047 MarR family C1N55_RS05280 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) C1N55_RS05295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1N55_RS05295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1N55_RS05305 PF00072 Response regulator receiver domain C1N55_RS05305 PF01584 CheW-like domain C1N55_RS05315 PF13090 Polyphosphate kinase C-terminal domain 2 C1N55_RS05315 PF17941 Polyphosphate kinase C-terminal domain 1 C1N55_RS05315 PF02503 Polyphosphate kinase middle domain C1N55_RS05315 PF13089 Polyphosphate kinase N-terminal domain C1N55_RS05320 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS05320 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS05320 PF00563 EAL domain C1N55_RS05345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS05345 PF03466 LysR substrate binding domain C1N55_RS05350 PF14602 Hexapeptide repeat of succinyl-transferase C1N55_RS05350 PF00132 Bacterial transferase hexapeptide (six repeats) C1N55_RS05350 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal C1N55_RS05355 PF01546 Peptidase family M20/M25/M40 C1N55_RS05355 PF07687 Peptidase dimerisation domain C1N55_RS05360 PF07690 Major Facilitator Superfamily C1N55_RS05365 PF13416 Bacterial extracellular solute-binding protein C1N55_RS05370 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS05375 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS05380 PF08402 TOBE domain C1N55_RS05380 PF00005 ABC transporter C1N55_RS05390 PF00578 AhpC/TSA family C1N55_RS05390 PF10417 C-terminal domain of 1-Cys peroxiredoxin C1N55_RS05395 PF00578 AhpC/TSA family C1N55_RS05405 PF13649 Methyltransferase domain C1N55_RS05410 PF02254 TrkA-N domain C1N55_RS05410 PF02080 TrkA-C domain C1N55_RS05415 PF17770 Ribonuclease J C-terminal domain C1N55_RS05415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1N55_RS05415 PF00753 Metallo-beta-lactamase superfamily C1N55_RS05420 PF07288 Protein of unknown function (DUF1447) C1N55_RS05430 PF01327 Polypeptide deformylase C1N55_RS05435 PF00676 Dehydrogenase E1 component C1N55_RS05440 PF02779 Transketolase, pyrimidine binding domain C1N55_RS05440 PF02780 Transketolase, C-terminal domain C1N55_RS05445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1N55_RS05445 PF00364 Biotin-requiring enzyme C1N55_RS05445 PF02817 e3 binding domain C1N55_RS05450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1N55_RS05450 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS05455 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C1N55_RS05455 PF17203 Single cache domain 3 C1N55_RS05455 PF00989 PAS fold C1N55_RS05460 PF12431 Transcriptional regulator C1N55_RS05460 PF08279 HTH domain C1N55_RS05460 PF00072 Response regulator receiver domain C1N55_RS05475 PF01970 Tripartite tricarboxylate transporter TctA family C1N55_RS05480 PF03788 LrgA family C1N55_RS05485 PF04172 LrgB-like family C1N55_RS05490 PF01276 Orn/Lys/Arg decarboxylase, major domain C1N55_RS05490 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C1N55_RS05495 PF03060 Nitronate monooxygenase C1N55_RS05500 PF05256 Uncharacterised protein family (UPF0223) C1N55_RS05510 PF06335 Protein of unknown function (DUF1054) C1N55_RS05520 PF00459 Inositol monophosphatase family C1N55_RS05530 PF03144 Elongation factor Tu domain 2 C1N55_RS05530 PF00679 Elongation factor G C-terminus C1N55_RS05530 PF14492 Elongation Factor G, domain II C1N55_RS05530 PF00009 Elongation factor Tu GTP binding domain C1N55_RS05535 PF14036 YlaH-like protein C1N55_RS05545 PF00005 ABC transporter C1N55_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS05555 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) C1N55_RS05565 PF07408 Protein of unknown function (DUF1507) C1N55_RS05570 PF01098 Cell cycle protein C1N55_RS05575 PF00364 Biotin-requiring enzyme C1N55_RS05575 PF02785 Biotin carboxylase C-terminal domain C1N55_RS05575 PF00682 HMGL-like C1N55_RS05575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1N55_RS05575 PF00289 Biotin carboxylase, N-terminal domain C1N55_RS05575 PF02436 Conserved carboxylase domain C1N55_RS05580 PF02628 Cytochrome oxidase assembly protein C1N55_RS05585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1N55_RS05585 PF00034 Cytochrome c C1N55_RS05585 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C1N55_RS05590 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1N55_RS05595 PF00510 Cytochrome c oxidase subunit III C1N55_RS05600 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C1N55_RS05605 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) C1N55_RS05610 PF04238 Protein of unknown function (DUF420) C1N55_RS05615 PF08868 YugN-like family C1N55_RS05625 PF08245 Mur ligase middle domain C1N55_RS05625 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS05625 PF01225 Mur ligase family, catalytic domain C1N55_RS05630 PF06133 Control of competence regulator ComK, YlbF/YmcA C1N55_RS05635 PF03009 Glycerophosphoryl diester phosphodiesterase family C1N55_RS05640 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) C1N55_RS05660 PF01467 Cytidylyltransferase-like C1N55_RS05675 PF05362 Lon protease (S16) C-terminal proteolytic domain C1N55_RS05675 PF13180 PDZ domain C1N55_RS05680 PF05636 HIGH Nucleotidyl Transferase C1N55_RS05685 PF02620 Large ribosomal RNA subunit accumulation protein YceD C1N55_RS05690 PF01783 Ribosomal L32p protein family C1N55_RS05695 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS05705 PF08546 Ketopantoate reductase PanE/ApbA C terminal C1N55_RS05705 PF02558 Ketopantoate reductase PanE/ApbA C1N55_RS05715 PF10079 Bacillithiol biosynthesis BshC C1N55_RS05720 PF02381 MraZ protein, putative antitoxin-like C1N55_RS05725 PF01795 MraW methylase family C1N55_RS05730 PF04977 Septum formation initiator C1N55_RS05735 PF03793 PASTA domain C1N55_RS05735 PF03717 Penicillin-binding Protein dimerisation domain C1N55_RS05735 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS05740 PF03793 PASTA domain C1N55_RS05740 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS05740 PF03717 Penicillin-binding Protein dimerisation domain C1N55_RS05745 PF00953 Glycosyl transferase family 4 C1N55_RS05745 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C1N55_RS05750 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS05750 PF08245 Mur ligase middle domain C1N55_RS05755 PF01098 Cell cycle protein C1N55_RS05760 PF08478 POTRA domain, FtsQ-type C1N55_RS05760 PF03799 Cell division protein FtsQ C1N55_RS05765 PF05949 Bacterial protein of unknown function (DUF881) C1N55_RS05775 PF06947 Protein of unknown function (DUF1290) C1N55_RS05780 PF02491 SHS2 domain inserted in FTSA C1N55_RS05785 PF00091 Tubulin/FtsZ family, GTPase domain C1N55_RS05785 PF12327 FtsZ family, C-terminal domain C1N55_RS05795 PF04545 Sigma-70, region 4 C1N55_RS05795 PF04542 Sigma-70 region 2 C1N55_RS05800 PF04545 Sigma-70, region 4 C1N55_RS05800 PF04542 Sigma-70 region 2 C1N55_RS05800 PF04539 Sigma-70 region 3 C1N55_RS05810 PF01168 Alanine racemase, N-terminal domain C1N55_RS05815 PF04472 Cell division protein SepF C1N55_RS05820 PF02325 YGGT family C1N55_RS05825 PF17774 Putative RNA-binding domain in YlmH C1N55_RS05825 PF01479 S4 domain C1N55_RS05830 PF05103 DivIVA protein C1N55_RS05835 PF00133 tRNA synthetases class I (I, L, M and V) C1N55_RS05835 PF08264 Anticodon-binding domain of tRNA C1N55_RS05835 PF06827 Zinc finger found in FPG and IleRS C1N55_RS05840 PF13683 Integrase core domain C1N55_RS05840 PF01610 Transposase C1N55_RS05845 PF01252 Signal peptidase (SPase) II C1N55_RS05850 PF00849 RNA pseudouridylate synthase C1N55_RS05850 PF01479 S4 domain C1N55_RS05855 PF00156 Phosphoribosyl transferase domain C1N55_RS05860 PF00860 Permease family C1N55_RS05865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1N55_RS05865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1N55_RS05870 PF01979 Amidohydrolase family C1N55_RS05875 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C1N55_RS05875 PF00117 Glutamine amidotransferase class-I C1N55_RS05880 PF02142 MGS-like domain C1N55_RS05880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C1N55_RS05880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1N55_RS05885 PF00970 Oxidoreductase FAD-binding domain C1N55_RS05885 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C1N55_RS05890 PF01180 Dihydroorotate dehydrogenase C1N55_RS05895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C1N55_RS05900 PF00156 Phosphoribosyl transferase domain C1N55_RS05905 PF00082 Subtilase family C1N55_RS05905 PF02225 PA domain C1N55_RS05905 PF00746 LPXTG cell wall anchor motif C1N55_RS05905 PF06280 Fn3-like domain C1N55_RS05910 PF05670 NFACT protein RNA binding domain C1N55_RS05915 PF03755 YicC-like family, N-terminal region C1N55_RS05915 PF08340 Domain of unknown function (DUF1732) C1N55_RS05920 PF00625 Guanylate kinase C1N55_RS05925 PF01192 RNA polymerase Rpb6 C1N55_RS05930 PF04127 DNA / pantothenate metabolism flavoprotein C1N55_RS05930 PF02441 Flavoprotein C1N55_RS05935 PF00271 Helicase conserved C-terminal domain C1N55_RS05935 PF17764 3′ DNA-binding domain (3′BD) C1N55_RS05935 PF18074 Primosomal protein N C-terminal domain C1N55_RS05935 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C1N55_RS05935 PF04851 Type III restriction enzyme, res subunit C1N55_RS05940 PF01327 Polypeptide deformylase C1N55_RS05945 PF02911 Formyl transferase, C-terminal domain C1N55_RS05945 PF00551 Formyl transferase C1N55_RS05950 PF01189 16S rRNA methyltransferase RsmB/F C1N55_RS05950 PF01029 NusB family C1N55_RS05955 PF04055 Radical SAM superfamily C1N55_RS05965 PF03793 PASTA domain C1N55_RS05965 PF00069 Protein kinase domain C1N55_RS05970 PF16745 RsgA N-terminal domain C1N55_RS05970 PF03193 RsgA GTPase C1N55_RS05975 PF00834 Ribulose-phosphate 3 epimerase family C1N55_RS05980 PF04263 Thiamin pyrophosphokinase, catalytic domain C1N55_RS05980 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain C1N55_RS05990 PF00830 Ribosomal L28 family C1N55_RS05995 PF03780 Asp23 family, cell envelope-related function C1N55_RS06000 PF02734 DAK2 domain C1N55_RS06000 PF13684 Dihydroxyacetone kinase family C1N55_RS06005 PF03315 Serine dehydratase beta chain C1N55_RS06005 PF01842 ACT domain C1N55_RS06010 PF03313 Serine dehydratase alpha chain C1N55_RS06015 PF00270 DEAD/DEAH box helicase C1N55_RS06015 PF00271 Helicase conserved C-terminal domain C1N55_RS06015 PF17191 RecG wedge domain C1N55_RS06020 PF03061 Thioesterase superfamily C1N55_RS06025 PF02504 Fatty acid synthesis protein C1N55_RS06030 PF00698 Acyl transferase domain C1N55_RS06040 PF00550 Phosphopantetheine attachment site C1N55_RS06045 PF14622 Ribonuclease-III-like C1N55_RS06045 PF00035 Double-stranded RNA binding motif C1N55_RS06050 PF06470 SMC proteins Flexible Hinge Domain C1N55_RS06050 PF02463 RecF/RecN/SMC N terminal domain C1N55_RS06055 PF02881 SRP54-type protein, helical bundle domain C1N55_RS06055 PF00448 SRP54-type protein, GTPase domain C1N55_RS06060 PF07690 Major Facilitator Superfamily C1N55_RS06065 PF04297 Putative helix-turn-helix protein, YlxM / p13 like C1N55_RS06070 PF02978 Signal peptide binding domain C1N55_RS06070 PF02881 SRP54-type protein, helical bundle domain C1N55_RS06070 PF00448 SRP54-type protein, GTPase domain C1N55_RS06075 PF00886 Ribosomal protein S16 C1N55_RS06085 PF05239 PRC-barrel domain C1N55_RS06085 PF01782 RimM N-terminal domain C1N55_RS06090 PF01746 tRNA (Guanine-1)-methyltransferase C1N55_RS06095 PF01245 Ribosomal protein L19 C1N55_RS06100 PF10502 Signal peptidase, peptidase S26 C1N55_RS06105 PF01926 50S ribosome-binding GTPase C1N55_RS06115 PF01351 Ribonuclease HII C1N55_RS06125 PF01312 FlhB HrpN YscU SpaS Family C1N55_RS06130 PF00549 CoA-ligase C1N55_RS06130 PF08442 ATP-grasp domain C1N55_RS06135 PF00549 CoA-ligase C1N55_RS06135 PF02629 CoA binding domain C1N55_RS06140 PF02481 DNA recombination-mediator protein A C1N55_RS06145 PF01396 Topoisomerase DNA binding C4 zinc finger C1N55_RS06145 PF01131 DNA topoisomerase C1N55_RS06145 PF01751 Toprim domain C1N55_RS06150 PF02899 Phage integrase, N-terminal SAM-like domain C1N55_RS06150 PF00589 Phage integrase family C1N55_RS06155 PF00227 Proteasome subunit C1N55_RS06160 PF10431 C-terminal, D2-small domain, of ClpB protein C1N55_RS06160 PF07724 AAA domain (Cdc48 subfamily) C1N55_RS06160 PF00004 ATPase family associated with various cellular activities (AAA) C1N55_RS06165 PF06018 CodY GAF-like domain C1N55_RS06165 PF08222 CodY helix-turn-helix domain C1N55_RS06170 PF00460 Flagella basal body rod protein C1N55_RS06175 PF00460 Flagella basal body rod protein C1N55_RS06175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1N55_RS06180 PF02049 Flagellar hook-basal body complex protein FliE C1N55_RS06185 PF08345 Flagellar M-ring protein C-terminal C1N55_RS06185 PF01514 Secretory protein of YscJ/FliF family C1N55_RS06190 PF14842 FliG N-terminal domain C1N55_RS06190 PF14841 FliG middle domain C1N55_RS06190 PF01706 FliG C-terminal domain C1N55_RS06200 PF02874 ATP synthase alpha/beta family, beta-barrel domain C1N55_RS06200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C1N55_RS06200 PF18269 T3SS EscN ATPase C-terminal domain C1N55_RS06205 PF02050 Flagellar FliJ protein C1N55_RS06220 PF03963 Flagellar hook capping protein - N-terminal region C1N55_RS06230 PF00460 Flagella basal body rod protein C1N55_RS06230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C1N55_RS06235 PF06289 Flagellar and Swarming motility proteins C1N55_RS06240 PF03748 Flagellar basal body-associated protein FliL C1N55_RS06245 PF02154 Flagellar motor switch protein FliM C1N55_RS06245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1N55_RS06250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C1N55_RS06250 PF04509 CheC-like family C1N55_RS06255 PF00072 Response regulator receiver domain C1N55_RS06260 PF04347 Flagellar biosynthesis protein, FliO C1N55_RS06265 PF00813 FliP family C1N55_RS06270 PF01313 Bacterial export proteins, family 3 C1N55_RS06275 PF01311 Bacterial export proteins, family 1 C1N55_RS06280 PF01312 FlhB HrpN YscU SpaS Family C1N55_RS06285 PF00771 FHIPEP family C1N55_RS06290 PF00448 SRP54-type protein, GTPase domain C1N55_RS06295 PF10609 NUBPL iron-transfer P-loop NTPase C1N55_RS06300 PF01339 CheB methylesterase C1N55_RS06300 PF00072 Response regulator receiver domain C1N55_RS06305 PF07194 P2 response regulator binding domain C1N55_RS06305 PF01627 Hpt domain C1N55_RS06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS06305 PF02895 Signal transducing histidine kinase, homodimeric domain C1N55_RS06305 PF01584 CheW-like domain C1N55_RS06310 PF01584 CheW-like domain C1N55_RS06315 PF04509 CheC-like family C1N55_RS06320 PF03975 CheD chemotactic sensory transduction C1N55_RS06330 PF04539 Sigma-70 region 3 C1N55_RS06330 PF04542 Sigma-70 region 2 C1N55_RS06330 PF04545 Sigma-70, region 4 C1N55_RS06345 PF00318 Ribosomal protein S2 C1N55_RS06350 PF00889 Elongation factor TS C1N55_RS06355 PF00696 Amino acid kinase family C1N55_RS06360 PF01765 Ribosome recycling factor C1N55_RS06370 PF01255 Putative undecaprenyl diphosphate synthase C1N55_RS06380 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C1N55_RS06380 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C1N55_RS06380 PF13288 DXP reductoisomerase C-terminal domain C1N55_RS06385 PF02163 Peptidase family M50 C1N55_RS06385 PF13180 PDZ domain C1N55_RS06390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1N55_RS06390 PF03129 Anticodon binding domain C1N55_RS06390 PF04073 Aminoacyl-tRNA editing domain C1N55_RS06395 PF00929 Exonuclease C1N55_RS06395 PF02811 PHP domain C1N55_RS06395 PF14480 DNA polymerase III polC-type N-terminus I C1N55_RS06395 PF11490 DNA polymerase III polC-type N-terminus II C1N55_RS06395 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1N55_RS06395 PF14579 Helix-hairpin-helix motif C1N55_RS06395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1N55_RS06400 PF17384 RimP C-terminal SH3 domain C1N55_RS06400 PF02576 RimP N-terminal domain C1N55_RS06405 PF08529 NusA N-terminal domain C1N55_RS06405 PF13184 NusA-like KH domain C1N55_RS06405 PF00575 S1 RNA binding domain C1N55_RS06410 PF04296 Protein of unknown function (DUF448) C1N55_RS06415 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C1N55_RS06420 PF00009 Elongation factor Tu GTP binding domain C1N55_RS06420 PF11987 Translation-initiation factor 2 C1N55_RS06420 PF04760 Translation initiation factor IF-2, N-terminal region C1N55_RS06425 PF04456 Protein of unknown function (DUF503) C1N55_RS06430 PF02033 Ribosome-binding factor A C1N55_RS06435 PF16198 tRNA pseudouridylate synthase B C-terminal domain C1N55_RS06435 PF01509 TruB family pseudouridylate synthase (N terminal domain) C1N55_RS06440 PF06574 FAD synthetase C1N55_RS06440 PF01687 Riboflavin kinase C1N55_RS06445 PF00312 Ribosomal protein S15 C1N55_RS06450 PF00575 S1 RNA binding domain C1N55_RS06450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C1N55_RS06450 PF03725 3' exoribonuclease family, domain 2 C1N55_RS06450 PF01138 3' exoribonuclease family, domain 1 C1N55_RS06450 PF00013 KH domain C1N55_RS06455 PF12704 MacB-like periplasmic core domain C1N55_RS06455 PF02687 FtsX-like permease family C1N55_RS06460 PF00005 ABC transporter C1N55_RS06465 PF05193 Peptidase M16 inactive domain C1N55_RS06465 PF00675 Insulinase (Peptidase family M16) C1N55_RS06480 PF02441 Flavoprotein C1N55_RS06485 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1N55_RS06485 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1N55_RS06490 PF00701 Dihydrodipicolinate synthetase family C1N55_RS06505 PF17770 Ribonuclease J C-terminal domain C1N55_RS06505 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1N55_RS06505 PF00753 Metallo-beta-lactamase superfamily C1N55_RS06510 PF01580 FtsK/SpoIIIE family C1N55_RS06510 PF09397 Ftsk gamma domain C1N55_RS06510 PF17854 FtsK alpha domain C1N55_RS06515 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS06515 PF07702 UTRA domain C1N55_RS06520 PF02608 ABC transporter substrate-binding protein PnrA-like C1N55_RS06525 PF00005 ABC transporter C1N55_RS06530 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS06535 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS06540 PF05193 Peptidase M16 inactive domain C1N55_RS06545 PF00675 Insulinase (Peptidase family M16) C1N55_RS06545 PF05193 Peptidase M16 inactive domain C1N55_RS06555 PF11588 Protein of unknown function (DUF3243) C1N55_RS06560 PF11868 Protein of unknown function (DUF3388) C1N55_RS06565 PF13464 Domain of unknown function (DUF4115) C1N55_RS06570 PF01066 CDP-alcohol phosphatidyltransferase C1N55_RS06575 PF02464 Competence-damaged protein C1N55_RS06575 PF18146 Damage-inducible protein CinA KH domain C1N55_RS06575 PF00994 Probable molybdopterin binding domain C1N55_RS06580 PF00154 recA bacterial DNA recombination protein C1N55_RS06590 PF12072 Domain of unknown function (DUF3552) C1N55_RS06590 PF00013 KH domain C1N55_RS06590 PF01966 HD domain C1N55_RS06600 PF07690 Major Facilitator Superfamily C1N55_RS06600 PF00083 Sugar (and other) transporter C1N55_RS06605 PF00501 AMP-binding enzyme C1N55_RS06605 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS06610 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS06615 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS06615 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS06615 PF00563 EAL domain C1N55_RS06635 PF02706 Chain length determinant protein C1N55_RS06635 PF13807 G-rich domain on putative tyrosine kinase C1N55_RS06640 PF13614 AAA domain C1N55_RS06650 PF02719 Polysaccharide biosynthesis protein C1N55_RS06655 PF00342 Phosphoglucose isomerase C1N55_RS06660 PF00483 Nucleotidyl transferase C1N55_RS06665 PF02397 Bacterial sugar transferase C1N55_RS06675 PF13439 Glycosyltransferase Family 4 C1N55_RS06675 PF00534 Glycosyl transferases group 1 C1N55_RS06700 PF16363 GDP-mannose 4,6 dehydratase C1N55_RS06725 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS06725 PF00498 FHA domain C1N55_RS06725 PF00563 EAL domain C1N55_RS06735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1N55_RS06735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1N55_RS06735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1N55_RS06735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1N55_RS06740 PF03816 Cell envelope-related transcriptional attenuator domain C1N55_RS06745 PF10997 Alternate to MurJ C1N55_RS06755 PF00860 Permease family C1N55_RS06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS06760 PF03466 LysR substrate binding domain C1N55_RS06780 PF00563 EAL domain C1N55_RS06780 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS06780 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS06825 PF01699 Sodium/calcium exchanger protein C1N55_RS06835 PF03358 NADPH-dependent FMN reductase C1N55_RS06840 PF03466 LysR substrate binding domain C1N55_RS06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS06875 PF00860 Permease family C1N55_RS06920 PF13021 Domain of unknown function (DUF3885) C1N55_RS06950 PF04542 Sigma-70 region 2 C1N55_RS06950 PF08281 Sigma-70, region 4 C1N55_RS06960 PF01098 Cell cycle protein C1N55_RS06995 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS07005 PF16736 Single Cache-like C1N55_RS07005 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS07005 PF00989 PAS fold C1N55_RS07010 PF00072 Response regulator receiver domain C1N55_RS07010 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS07020 PF00149 Calcineurin-like phosphoesterase C1N55_RS07025 PF07293 Protein of unknown function (DUF1450) C1N55_RS07030 PF04607 Region found in RelA / SpoT proteins C1N55_RS07040 PF13460 NAD(P)H-binding C1N55_RS07050 PF09297 NADH pyrophosphatase zinc ribbon domain C1N55_RS07050 PF00293 NUDIX domain C1N55_RS07050 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain C1N55_RS07080 PF00561 alpha/beta hydrolase fold C1N55_RS07100 PF10706 Aminoglycoside-2''-adenylyltransferase C1N55_RS07105 PF13673 Acetyltransferase (GNAT) domain C1N55_RS07105 PF04229 GrpB protein C1N55_RS07110 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS07110 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS07110 PF00563 EAL domain C1N55_RS07125 PF13333 Integrase core domain C1N55_RS07125 PF13276 HTH-like domain C1N55_RS07125 PF00665 Integrase core domain C1N55_RS07140 PF01638 HxlR-like helix-turn-helix C1N55_RS07145 PF05368 NmrA-like family C1N55_RS07190 PF01740 STAS domain C1N55_RS07195 PF02397 Bacterial sugar transferase C1N55_RS07205 PF02911 Formyl transferase, C-terminal domain C1N55_RS07205 PF00551 Formyl transferase C1N55_RS07210 PF02222 ATP-grasp domain C1N55_RS07210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1N55_RS07210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C1N55_RS07215 PF02719 Polysaccharide biosynthesis protein C1N55_RS07220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1N55_RS07235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1N55_RS07235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1N55_RS07235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1N55_RS07245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C1N55_RS07245 PF00132 Bacterial transferase hexapeptide (six repeats) C1N55_RS07250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C1N55_RS07250 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C1N55_RS07260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C1N55_RS07280 PF02706 Chain length determinant protein C1N55_RS07280 PF13807 G-rich domain on putative tyrosine kinase C1N55_RS07285 PF13614 AAA domain C1N55_RS07290 PF13277 YmdB-like protein C1N55_RS07295 PF04232 Stage V sporulation protein S (SpoVS) C1N55_RS07300 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS07300 PF00672 HAMP domain C1N55_RS07300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS07305 PF13180 PDZ domain C1N55_RS07305 PF17820 PDZ domain C1N55_RS07310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C1N55_RS07310 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C1N55_RS07310 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C1N55_RS07315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1N55_RS07345 PF03616 Sodium/glutamate symporter C1N55_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS07350 PF03466 LysR substrate binding domain C1N55_RS07355 PF01546 Peptidase family M20/M25/M40 C1N55_RS07360 PF01266 FAD dependent oxidoreductase C1N55_RS07390 PF02743 Cache domain C1N55_RS07390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS07390 PF00672 HAMP domain C1N55_RS07395 PF01470 Pyroglutamyl peptidase C1N55_RS07410 PF00919 Uncharacterized protein family UPF0004 C1N55_RS07410 PF01938 TRAM domain C1N55_RS07410 PF04055 Radical SAM superfamily C1N55_RS07415 PF06133 Control of competence regulator ComK, YlbF/YmcA C1N55_RS07420 PF00533 BRCA1 C Terminus (BRCT) domain C1N55_RS07420 PF01653 NAD-dependent DNA ligase adenylation domain C1N55_RS07420 PF03120 NAD-dependent DNA ligase OB-fold domain C1N55_RS07420 PF12826 Helix-hairpin-helix motif C1N55_RS07440 PF10628 Outer spore coat protein E (CotE) C1N55_RS07445 PF05192 MutS domain III C1N55_RS07445 PF05188 MutS domain II C1N55_RS07445 PF01624 MutS domain I C1N55_RS07445 PF05190 MutS family domain IV C1N55_RS07445 PF00488 MutS domain V C1N55_RS07450 PF08676 MutL C terminal dimerisation domain C1N55_RS07450 PF01119 DNA mismatch repair protein, C-terminal domain C1N55_RS07455 PF01266 FAD dependent oxidoreductase C1N55_RS07455 PF16901 C-terminal domain of alpha-glycerophosphate oxidase C1N55_RS07470 PF17209 Hfq protein C1N55_RS07480 PF00581 Rhodanese-like domain C1N55_RS07485 PF03458 UPF0126 domain C1N55_RS07490 PF06838 Methionine gamma-lyase C1N55_RS07500 PF13411 MerR HTH family regulatory protein C1N55_RS07505 PF00120 Glutamine synthetase, catalytic domain C1N55_RS07505 PF03951 Glutamine synthetase, beta-Grasp domain C1N55_RS07550 PF00437 Type II/IV secretion system protein C1N55_RS07550 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C1N55_RS07555 PF00437 Type II/IV secretion system protein C1N55_RS07560 PF00482 Type II secretion system (T2SS), protein F C1N55_RS07585 PF06750 Bacterial Peptidase A24 N-terminal domain C1N55_RS07585 PF01478 Type IV leader peptidase family C1N55_RS07590 PF07722 Peptidase C26 C1N55_RS07595 PF00717 Peptidase S24-like C1N55_RS07595 PF01726 LexA DNA binding domain C1N55_RS07605 PF00239 Resolvase, N terminal domain C1N55_RS07610 PF13411 MerR HTH family regulatory protein C1N55_RS07615 PF08240 Alcohol dehydrogenase GroES-like domain C1N55_RS07615 PF00107 Zinc-binding dehydrogenase C1N55_RS07620 PF05979 Bacterial protein of unknown function (DUF896) C1N55_RS07625 PF02779 Transketolase, pyrimidine binding domain C1N55_RS07625 PF02780 Transketolase, C-terminal domain C1N55_RS07625 PF00456 Transketolase, thiamine diphosphate binding domain C1N55_RS07630 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS07630 PF07694 5TMR of 5TMR-LYT C1N55_RS07635 PF01144 Coenzyme A transferase C1N55_RS07640 PF01144 Coenzyme A transferase C1N55_RS07645 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS07645 PF00072 Response regulator receiver domain C1N55_RS07650 PF07730 Histidine kinase C1N55_RS07650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS07675 PF03672 Uncharacterised protein family (UPF0154) C1N55_RS07680 PF12146 Serine aminopeptidase, S33 C1N55_RS07695 PF01144 Coenzyme A transferase C1N55_RS07700 PF01144 Coenzyme A transferase C1N55_RS07705 PF00158 Sigma-54 interaction domain C1N55_RS07705 PF00989 PAS fold C1N55_RS07705 PF02954 Bacterial regulatory protein, Fis family C1N55_RS07715 PF00324 Amino acid permease C1N55_RS07725 PF00248 Aldo/keto reductase family C1N55_RS07730 PF00293 NUDIX domain C1N55_RS07740 PF01475 Ferric uptake regulator family C1N55_RS07745 PF00589 Phage integrase family C1N55_RS07745 PF02899 Phage integrase, N-terminal SAM-like domain C1N55_RS07750 PF01676 Metalloenzyme superfamily C1N55_RS07755 PF00591 Glycosyl transferase family, a/b domain C1N55_RS07755 PF02885 Glycosyl transferase family, helical bundle domain C1N55_RS07755 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C1N55_RS07760 PF01740 STAS domain C1N55_RS07765 PF13581 Histidine kinase-like ATPase domain C1N55_RS07770 PF04539 Sigma-70 region 3 C1N55_RS07770 PF04542 Sigma-70 region 2 C1N55_RS07770 PF04545 Sigma-70, region 4 C1N55_RS07775 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS07780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1N55_RS07780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C1N55_RS07785 PF00583 Acetyltransferase (GNAT) family C1N55_RS07795 PF02616 Segregation and condensation protein ScpA C1N55_RS07800 PF04079 Segregation and condensation complex subunit ScpB C1N55_RS07805 PF00768 D-alanyl-D-alanine carboxypeptidase C1N55_RS07805 PF07943 Penicillin-binding protein 5, C-terminal domain C1N55_RS07810 PF01479 S4 domain C1N55_RS07810 PF00849 RNA pseudouridylate synthase C1N55_RS07815 PF00578 AhpC/TSA family C1N55_RS07820 PF05140 ResB-like family C1N55_RS07825 PF01578 Cytochrome C assembly protein C1N55_RS07830 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS07830 PF00072 Response regulator receiver domain C1N55_RS07835 PF00672 HAMP domain C1N55_RS07835 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS07835 PF00989 PAS fold C1N55_RS07835 PF18698 Histidine kinase sensor domain C1N55_RS07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS07850 PF12822 ECF transporter, substrate-specific component C1N55_RS07855 PF13411 MerR HTH family regulatory protein C1N55_RS07860 PF03951 Glutamine synthetase, beta-Grasp domain C1N55_RS07860 PF00120 Glutamine synthetase, catalytic domain C1N55_RS07865 PF00578 AhpC/TSA family C1N55_RS07870 PF00395 S-layer homology domain C1N55_RS07870 PF02368 Bacterial Ig-like domain (group 2) C1N55_RS07875 PF00395 S-layer homology domain C1N55_RS07890 PF00005 ABC transporter C1N55_RS07920 PF14493 Helix-turn-helix domain C1N55_RS07925 PF00271 Helicase conserved C-terminal domain C1N55_RS07925 PF00270 DEAD/DEAH box helicase C1N55_RS07930 PF01476 LysM domain C1N55_RS07935 PF00149 Calcineurin-like phosphoesterase C1N55_RS07965 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C1N55_RS07965 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C1N55_RS07970 PF00753 Metallo-beta-lactamase superfamily C1N55_RS07975 PF01144 Coenzyme A transferase C1N55_RS07980 PF01144 Coenzyme A transferase C1N55_RS07985 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS07985 PF07702 UTRA domain C1N55_RS07990 PF01494 FAD binding domain C1N55_RS07995 PF07859 alpha/beta hydrolase fold C1N55_RS08000 PF16868 NMT1-like family C1N55_RS08020 PF00561 alpha/beta hydrolase fold C1N55_RS08025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS08025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS08030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS08035 PF01613 Flavin reductase like domain C1N55_RS08040 PF01557 Fumarylacetoacetate (FAA) hydrolase family C1N55_RS08045 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation C1N55_RS08045 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1N55_RS08050 PF00682 HMGL-like C1N55_RS08050 PF07836 DmpG-like communication domain C1N55_RS08070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS08075 PF06574 FAD synthetase C1N55_RS08075 PF01687 Riboflavin kinase C1N55_RS08085 PF04205 FMN-binding domain C1N55_RS08085 PF00890 FAD binding domain C1N55_RS08090 PF00106 short chain dehydrogenase C1N55_RS08100 PF14537 Cytochrome c3 C1N55_RS08100 PF00890 FAD binding domain C1N55_RS08110 PF00158 Sigma-54 interaction domain C1N55_RS08110 PF02830 V4R domain C1N55_RS08110 PF06505 Activator of aromatic catabolism C1N55_RS08110 PF02954 Bacterial regulatory protein, Fis family C1N55_RS08115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS08115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS08120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS08125 PF00561 alpha/beta hydrolase fold C1N55_RS08130 PF00890 FAD binding domain C1N55_RS08130 PF14537 Cytochrome c3 C1N55_RS08140 PF17763 Glutaminase/Asparaginase C-terminal domain C1N55_RS08140 PF00710 Asparaginase, N-terminal C1N55_RS08145 PF13367 PrsW family intramembrane metalloprotease C1N55_RS08150 PF01471 Putative peptidoglycan binding domain C1N55_RS08150 PF07486 Cell Wall Hydrolase C1N55_RS08160 PF07317 Flagellar regulator YcgR C1N55_RS08160 PF07238 PilZ domain C1N55_RS08170 PF02224 Cytidylate kinase C1N55_RS08175 PF00575 S1 RNA binding domain C1N55_RS08180 PF01926 50S ribosome-binding GTPase C1N55_RS08180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C1N55_RS08185 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C1N55_RS08185 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C1N55_RS08200 PF09547 Stage IV sporulation protein A (spore_IV_A) C1N55_RS08205 PF00216 Bacterial DNA-binding protein C1N55_RS08210 PF01227 GTP cyclohydrolase I C1N55_RS08215 PF02081 Tryptophan RNA-binding attenuator protein C1N55_RS08225 PF01209 ubiE/COQ5 methyltransferase family C1N55_RS08230 PF00348 Polyprenyl synthetase C1N55_RS08235 PF00334 Nucleoside diphosphate kinase C1N55_RS08245 PF03705 CheR methyltransferase, all-alpha domain C1N55_RS08245 PF01739 CheR methyltransferase, SAM binding domain C1N55_RS08250 PF01264 Chorismate synthase C1N55_RS08255 PF01761 3-dehydroquinate synthase C1N55_RS08260 PF07736 Chorismate mutase type I C1N55_RS08265 PF00155 Aminotransferase class I and II C1N55_RS08270 PF02153 Prephenate dehydrogenase C1N55_RS08270 PF01842 ACT domain C1N55_RS08275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C1N55_RS08285 PF08858 IDEAL domain C1N55_RS08285 PF08864 UPF0302 domain C1N55_RS08290 PF10673 Protein of unknown function (DUF2487) C1N55_RS08295 PF00355 Rieske [2Fe-2S] domain C1N55_RS08300 PF00033 Cytochrome b/b6/petB C1N55_RS08305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1N55_RS08305 PF00032 Cytochrome b(C-terminal)/b6/petD C1N55_RS08310 PF07187 Protein of unknown function (DUF1405) C1N55_RS08315 PF04298 Putative neutral zinc metallopeptidase C1N55_RS08320 PF13360 PQQ-like domain C1N55_RS08320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1N55_RS08325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS08325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C1N55_RS08330 PF01113 Dihydrodipicolinate reductase, N-terminus C1N55_RS08330 PF05173 Dihydrodipicolinate reductase, C-terminus C1N55_RS08335 PF02142 MGS-like domain C1N55_RS08340 PF00534 Glycosyl transferases group 1 C1N55_RS08340 PF13439 Glycosyltransferase Family 4 C1N55_RS08345 PF13735 tRNA nucleotidyltransferase domain 2 putative C1N55_RS08345 PF01743 Poly A polymerase head domain C1N55_RS08345 PF12627 Probable RNA and SrmB- binding site of polymerase A C1N55_RS08350 PF02237 Biotin protein ligase C terminal domain C1N55_RS08350 PF03099 Biotin/lipoate A/B protein ligase family C1N55_RS08350 PF08279 HTH domain C1N55_RS08355 PF02548 Ketopantoate hydroxymethyltransferase C1N55_RS08360 PF02569 Pantoate-beta-alanine ligase C1N55_RS08365 PF02261 Aspartate decarboxylase C1N55_RS08370 PF04851 Type III restriction enzyme, res subunit C1N55_RS08370 PF13307 Helicase C-terminal domain C1N55_RS08370 PF00929 Exonuclease C1N55_RS08380 PF00155 Aminotransferase class I and II C1N55_RS08385 PF00152 tRNA synthetases class II (D, K and N) C1N55_RS08385 PF01336 OB-fold nucleic acid binding domain C1N55_RS08390 PF07261 Replication initiation and membrane attachment C1N55_RS08395 PF10576 Iron-sulfur binding domain of endonuclease III C1N55_RS08395 PF00730 HhH-GPD superfamily base excision DNA repair protein C1N55_RS08395 PF00633 Helix-hairpin-helix motif C1N55_RS08405 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS08405 PF00912 Transglycosylase C1N55_RS08410 PF03838 Recombination protein U C1N55_RS08425 PF00271 Helicase conserved C-terminal domain C1N55_RS08425 PF09369 Domain of unknown function (DUF1998) C1N55_RS08425 PF00270 DEAD/DEAH box helicase C1N55_RS08430 PF13482 RNase_H superfamily C1N55_RS08435 PF05103 DivIVA protein C1N55_RS08445 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS08445 PF00563 EAL domain C1N55_RS08445 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS08450 PF02926 THUMP domain C1N55_RS08450 PF01170 Putative RNA methylase family UPF0020 C1N55_RS08455 PF13307 Helicase C-terminal domain C1N55_RS08470 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1N55_RS08470 PF00005 ABC transporter C1N55_RS08475 PF00005 ABC transporter C1N55_RS08480 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS08490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C1N55_RS08490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C1N55_RS08495 PF00561 alpha/beta hydrolase fold C1N55_RS08505 PF00501 AMP-binding enzyme C1N55_RS08505 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS08510 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1N55_RS08515 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1N55_RS08515 PF09125 Cytochrome C oxidase subunit II, transmembrane C1N55_RS08525 PF00350 Dynamin family C1N55_RS08530 PF00581 Rhodanese-like domain C1N55_RS08540 PF07833 Copper amine oxidase N-terminal domain C1N55_RS08545 PF03949 Malic enzyme, NAD binding domain C1N55_RS08545 PF00390 Malic enzyme, N-terminal domain C1N55_RS08550 PF08439 Oligopeptidase F C1N55_RS08550 PF01432 Peptidase family M3 C1N55_RS08555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1N55_RS08555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1N55_RS08560 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C1N55_RS08565 PF00291 Pyridoxal-phosphate dependent enzyme C1N55_RS08570 PF17151 Periplasmic sensor domain C1N55_RS08570 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS08585 PF03630 Fumble C1N55_RS08590 PF13456 Reverse transcriptase-like C1N55_RS08595 PF10782 Zinc-finger C1N55_RS08610 PF05225 helix-turn-helix, Psq domain C1N55_RS08610 PF02810 SEC-C motif C1N55_RS08615 PF02441 Flavoprotein C1N55_RS08615 PF04127 DNA / pantothenate metabolism flavoprotein C1N55_RS08620 PF04073 Aminoacyl-tRNA editing domain C1N55_RS08640 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C1N55_RS08640 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS08645 PF12849 PBP superfamily domain C1N55_RS08650 PF00313 'Cold-shock' DNA-binding domain C1N55_RS08655 PF01268 Formate--tetrahydrofolate ligase C1N55_RS08660 PF00005 ABC transporter C1N55_RS08660 PF17755 UvrA DNA-binding domain C1N55_RS08660 PF17760 UvrA interaction domain C1N55_RS08665 PF00664 ABC transporter transmembrane region C1N55_RS08665 PF00005 ABC transporter C1N55_RS08670 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS08675 PF00005 ABC transporter C1N55_RS08690 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS08690 PF00672 HAMP domain C1N55_RS08690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS08695 PF00356 Bacterial regulatory proteins, lacI family C1N55_RS08700 PF00294 pfkB family carbohydrate kinase C1N55_RS08705 PF05025 RbsD / FucU transport protein family C1N55_RS08710 PF00005 ABC transporter C1N55_RS08715 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS08720 PF13407 Periplasmic binding protein domain C1N55_RS08725 PF07681 DoxX C1N55_RS08730 PF01966 HD domain C1N55_RS08740 PF03806 AbgT putative transporter family C1N55_RS08745 PF07687 Peptidase dimerisation domain C1N55_RS08745 PF01546 Peptidase family M20/M25/M40 C1N55_RS08750 PF01546 Peptidase family M20/M25/M40 C1N55_RS08755 PF00005 ABC transporter C1N55_RS08755 PF12848 ABC transporter C1N55_RS08755 PF16326 ABC transporter C-terminal domain C1N55_RS08760 PF13769 Virulence factor C1N55_RS08760 PF08712 Scaffold protein Nfu/NifU N terminal C1N55_RS08765 PF00892 EamA-like transporter family C1N55_RS08795 PF00027 Cyclic nucleotide-binding domain C1N55_RS08830 PF04294 VanW like protein C1N55_RS08835 PF02567 Phenazine biosynthesis-like protein C1N55_RS08850 PF00403 Heavy-metal-associated domain C1N55_RS08855 PF00403 Heavy-metal-associated domain C1N55_RS08860 PF01522 Polysaccharide deacetylase C1N55_RS08885 PF01751 Toprim domain C1N55_RS08885 PF01131 DNA topoisomerase C1N55_RS08930 PF13840 ACT domain C1N55_RS08930 PF00696 Amino acid kinase family C1N55_RS08950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1N55_RS08950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1N55_RS08955 PF00132 Bacterial transferase hexapeptide (six repeats) C1N55_RS08975 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS08975 PF00155 Aminotransferase class I and II C1N55_RS08990 PF00583 Acetyltransferase (GNAT) family C1N55_RS09000 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS09015 PF09962 Uncharacterized conserved protein (DUF2196) C1N55_RS09025 PF00872 Transposase, Mutator family C1N55_RS09030 PF01022 Bacterial regulatory protein, arsR family C1N55_RS09055 PF14489 QueF-like protein C1N55_RS09060 PF06508 Queuosine biosynthesis protein QueC C1N55_RS09065 PF01242 6-pyruvoyl tetrahydropterin synthase C1N55_RS09070 PF04055 Radical SAM superfamily C1N55_RS09085 PF01970 Tripartite tricarboxylate transporter TctA family C1N55_RS09090 PF03401 Tripartite tricarboxylate transporter family receptor C1N55_RS09100 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C1N55_RS09100 PF08666 SAF domain C1N55_RS09105 PF00701 Dihydrodipicolinate synthetase family C1N55_RS09110 PF00171 Aldehyde dehydrogenase family C1N55_RS09115 PF07690 Major Facilitator Superfamily C1N55_RS09120 PF13378 Enolase C-terminal domain-like C1N55_RS09120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C1N55_RS09125 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS09125 PF07729 FCD domain C1N55_RS09140 PF02743 Cache domain C1N55_RS09140 PF00672 HAMP domain C1N55_RS09140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS09155 PF07690 Major Facilitator Superfamily C1N55_RS09160 PF08000 Bacterial PH domain C1N55_RS09160 PF11724 YvbH-like oligomerisation region C1N55_RS09195 PF13302 Acetyltransferase (GNAT) domain C1N55_RS09200 PF00324 Amino acid permease C1N55_RS09205 PF01810 LysE type translocator C1N55_RS09220 PF00005 ABC transporter C1N55_RS09230 PF07690 Major Facilitator Superfamily C1N55_RS09235 PF06491 Disulphide isomerase C1N55_RS09240 PF04445 Putative SAM-dependent methyltransferase C1N55_RS09245 PF00005 ABC transporter C1N55_RS09250 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS09255 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1N55_RS09260 PF14005 YpjP-like protein C1N55_RS09275 PF02625 XdhC and CoxI family C1N55_RS09275 PF13478 XdhC Rossmann domain C1N55_RS09280 PF12804 MobA-like NTP transferase domain C1N55_RS09285 PF04055 Radical SAM superfamily C1N55_RS09285 PF06463 Molybdenum Cofactor Synthesis C C1N55_RS09295 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS09300 PF00899 ThiF family C1N55_RS09305 PF00994 Probable molybdopterin binding domain C1N55_RS09305 PF03454 MoeA C-terminal region (domain IV) C1N55_RS09305 PF03453 MoeA N-terminal region (domain I and II) C1N55_RS09310 PF02391 MoaE protein C1N55_RS09315 PF02597 ThiS family C1N55_RS09320 PF00994 Probable molybdopterin binding domain C1N55_RS09325 PF01967 MoaC family C1N55_RS09330 PF00941 FAD binding domain in molybdopterin dehydrogenase C1N55_RS09335 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C1N55_RS09335 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C1N55_RS09340 PF00111 2Fe-2S iron-sulfur cluster binding domain C1N55_RS09340 PF01799 [2Fe-2S] binding domain C1N55_RS09345 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS09345 PF08448 PAS fold C1N55_RS09350 PF00303 Thymidylate synthase C1N55_RS09355 PF12848 ABC transporter C1N55_RS09355 PF16326 ABC transporter C-terminal domain C1N55_RS09355 PF00005 ABC transporter C1N55_RS09365 PF13302 Acetyltransferase (GNAT) domain C1N55_RS09385 PF00186 Dihydrofolate reductase C1N55_RS09395 PF01145 SPFH domain / Band 7 family C1N55_RS09395 PF15975 Flotillin C1N55_RS09405 PF00704 Glycosyl hydrolases family 18 C1N55_RS09415 PF13847 Methyltransferase domain C1N55_RS09415 PF01938 TRAM domain C1N55_RS09415 PF05958 tRNA (Uracil-5-)-methyltransferase C1N55_RS09420 PF00072 Response regulator receiver domain C1N55_RS09420 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS09425 PF00989 PAS fold C1N55_RS09425 PF16736 Single Cache-like C1N55_RS09425 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS09425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS09430 PF12704 MacB-like periplasmic core domain C1N55_RS09430 PF00005 ABC transporter C1N55_RS09430 PF02687 FtsX-like permease family C1N55_RS09445 PF03176 MMPL family C1N55_RS09450 PF03006 Haemolysin-III related C1N55_RS09455 PF02645 Uncharacterised protein, DegV family COG1307 C1N55_RS09460 PF03845 Spore germination protein C1N55_RS09465 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS09475 PF13472 GDSL-like Lipase/Acylhydrolase family C1N55_RS09485 PF01625 Peptide methionine sulfoxide reductase C1N55_RS09490 PF01641 SelR domain C1N55_RS09500 PF05504 Spore germination B3/ GerAC like, C-terminal C1N55_RS09505 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS09510 PF03845 Spore germination protein C1N55_RS09515 PF06855 YozE SAM-like fold C1N55_RS09520 PF01048 Phosphorylase superfamily C1N55_RS09525 PF01471 Putative peptidoglycan binding domain C1N55_RS09525 PF03572 Peptidase family S41 C1N55_RS09525 PF17820 PDZ domain C1N55_RS09530 PF07683 Cobalamin synthesis protein cobW C-terminal domain C1N55_RS09530 PF02492 CobW/HypB/UreG, nucleotide-binding domain C1N55_RS09535 PF00188 Cysteine-rich secretory protein family C1N55_RS09540 PF04101 Glycosyltransferase family 28 C-terminal domain C1N55_RS09540 PF03033 Glycosyltransferase family 28 N-terminal domain C1N55_RS09550 PF01678 Diaminopimelate epimerase C1N55_RS09555 PF00563 EAL domain C1N55_RS09555 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS09555 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS09560 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS09560 PF00072 Response regulator receiver domain C1N55_RS09565 PF18719 ArlS sensor domain C1N55_RS09565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS09565 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS09570 PF02779 Transketolase, pyrimidine binding domain C1N55_RS09570 PF16078 2-oxoglutarate dehydrogenase N-terminus C1N55_RS09570 PF00676 Dehydrogenase E1 component C1N55_RS09570 PF16870 2-oxoglutarate dehydrogenase C-terminal C1N55_RS09575 PF02817 e3 binding domain C1N55_RS09575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1N55_RS09575 PF00364 Biotin-requiring enzyme C1N55_RS09580 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1N55_RS09585 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS09590 PF00005 ABC transporter C1N55_RS09600 PF05816 Toxic anion resistance protein (TelA) C1N55_RS09615 PF00313 'Cold-shock' DNA-binding domain C1N55_RS09625 PF00005 ABC transporter C1N55_RS09625 PF12848 ABC transporter C1N55_RS09630 PF00570 HRDC domain C1N55_RS09630 PF16124 RecQ zinc-binding C1N55_RS09630 PF09382 RQC domain C1N55_RS09630 PF00270 DEAD/DEAH box helicase C1N55_RS09630 PF00271 Helicase conserved C-terminal domain C1N55_RS09635 PF01625 Peptide methionine sulfoxide reductase C1N55_RS09640 PF03816 Cell envelope-related transcriptional attenuator domain C1N55_RS09645 PF01594 AI-2E family transporter C1N55_RS09650 PF00155 Aminotransferase class I and II C1N55_RS09660 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS09690 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS09690 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS09690 PF00563 EAL domain C1N55_RS09700 PF14266 Putative component of 'biosynthetic module' C1N55_RS09705 PF05816 Toxic anion resistance protein (TelA) C1N55_RS09715 PF03466 LysR substrate binding domain C1N55_RS09715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS09725 PF03466 LysR substrate binding domain C1N55_RS09755 PF03466 LysR substrate binding domain C1N55_RS09755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS09760 PF00892 EamA-like transporter family C1N55_RS09765 PF04239 Protein of unknown function (DUF421) C1N55_RS09795 PF14158 YndJ-like protein C1N55_RS09815 PF00583 Acetyltransferase (GNAT) family C1N55_RS09825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS09830 PF02583 Metal-sensitive transcriptional repressor C1N55_RS09835 PF12368 Rhodanase C-terminal C1N55_RS09835 PF17773 UPF0176 acylphosphatase like domain C1N55_RS09835 PF00581 Rhodanese-like domain C1N55_RS09845 PF00581 Rhodanese-like domain C1N55_RS09845 PF01206 Sulfurtransferase TusA C1N55_RS09850 PF13686 DsrE/DsrF/DrsH-like family C1N55_RS09855 PF00581 Rhodanese-like domain C1N55_RS09855 PF00753 Metallo-beta-lactamase superfamily C1N55_RS09860 PF01206 Sulfurtransferase TusA C1N55_RS09865 PF01925 Sulfite exporter TauE/SafE C1N55_RS09880 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS09880 PF00072 Response regulator receiver domain C1N55_RS09885 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS09885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS09890 PF00206 Lyase C1N55_RS09890 PF10415 Fumarase C C-terminus C1N55_RS09905 PF00205 Thiamine pyrophosphate enzyme, central domain C1N55_RS09905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1N55_RS09905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1N55_RS09910 PF03466 LysR substrate binding domain C1N55_RS09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS09915 PF00474 Sodium:solute symporter family C1N55_RS09920 PF01321 Creatinase/Prolidase N-terminal domain C1N55_RS09920 PF00557 Metallopeptidase family M24 C1N55_RS09930 PF00109 Beta-ketoacyl synthase, N-terminal domain C1N55_RS09930 PF02801 Beta-ketoacyl synthase, C-terminal domain C1N55_RS09940 PF06968 Biotin and Thiamin Synthesis associated domain C1N55_RS09940 PF04055 Radical SAM superfamily C1N55_RS09945 PF03992 Antibiotic biosynthesis monooxygenase C1N55_RS09950 PF01156 Inosine-uridine preferring nucleoside hydrolase C1N55_RS09960 PF00248 Aldo/keto reductase family C1N55_RS09970 PF00248 Aldo/keto reductase family C1N55_RS09980 PF02016 LD-carboxypeptidase N-terminal domain C1N55_RS09980 PF17676 LD-carboxypeptidase C-terminal domain C1N55_RS10000 PF00005 ABC transporter C1N55_RS10000 PF13732 Domain of unknown function (DUF4162) C1N55_RS10005 PF01061 ABC-2 type transporter C1N55_RS10030 PF00857 Isochorismatase family C1N55_RS10045 PF01144 Coenzyme A transferase C1N55_RS10050 PF01144 Coenzyme A transferase C1N55_RS10055 PF02803 Thiolase, C-terminal domain C1N55_RS10055 PF00108 Thiolase, N-terminal domain C1N55_RS10065 PF02667 Short chain fatty acid transporter C1N55_RS10075 PF03601 Conserved hypothetical protein 698 C1N55_RS10080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS10080 PF03466 LysR substrate binding domain C1N55_RS10090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C1N55_RS10090 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS10095 PF02687 FtsX-like permease family C1N55_RS10100 PF00005 ABC transporter C1N55_RS10105 PF00072 Response regulator receiver domain C1N55_RS10105 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS10110 PF00989 PAS fold C1N55_RS10110 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS10110 PF18698 Histidine kinase sensor domain C1N55_RS10110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS10110 PF00672 HAMP domain C1N55_RS10150 PF07690 Major Facilitator Superfamily C1N55_RS10155 PF00893 Small Multidrug Resistance protein C1N55_RS10160 PF00893 Small Multidrug Resistance protein C1N55_RS10165 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS10165 PF00155 Aminotransferase class I and II C1N55_RS10170 PF04299 Putative FMN-binding domain C1N55_RS10175 PF00701 Dihydrodipicolinate synthetase family C1N55_RS10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS10180 PF03466 LysR substrate binding domain C1N55_RS10185 PF01842 ACT domain C1N55_RS10185 PF00742 Homoserine dehydrogenase C1N55_RS10185 PF03447 Homoserine dehydrogenase, NAD binding domain C1N55_RS10200 PF01047 MarR family C1N55_RS10205 PF00583 Acetyltransferase (GNAT) family C1N55_RS10215 PF03466 LysR substrate binding domain C1N55_RS10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS10220 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1N55_RS10220 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1N55_RS10235 PF01206 Sulfurtransferase TusA C1N55_RS10240 PF13686 DsrE/DsrF/DrsH-like family C1N55_RS10245 PF07883 Cupin domain C1N55_RS10250 PF02583 Metal-sensitive transcriptional repressor C1N55_RS10255 PF02583 Metal-sensitive transcriptional repressor C1N55_RS10260 PF00581 Rhodanese-like domain C1N55_RS10260 PF17773 UPF0176 acylphosphatase like domain C1N55_RS10260 PF12368 Rhodanase C-terminal C1N55_RS10265 PF00581 Rhodanese-like domain C1N55_RS10270 PF01206 Sulfurtransferase TusA C1N55_RS10270 PF00581 Rhodanese-like domain C1N55_RS10275 PF13686 DsrE/DsrF/DrsH-like family C1N55_RS10280 PF00753 Metallo-beta-lactamase superfamily C1N55_RS10280 PF00581 Rhodanese-like domain C1N55_RS10285 PF01206 Sulfurtransferase TusA C1N55_RS10290 PF01925 Sulfite exporter TauE/SafE C1N55_RS10300 PF03176 MMPL family C1N55_RS10310 PF00589 Phage integrase family C1N55_RS10310 PF02899 Phage integrase, N-terminal SAM-like domain C1N55_RS10315 PF07563 Protein of unknown function (DUF1541) C1N55_RS10320 PF00072 Response regulator receiver domain C1N55_RS10320 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS10325 PF16736 Single Cache-like C1N55_RS10325 PF00989 PAS fold C1N55_RS10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS10325 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS10335 PF00474 Sodium:solute symporter family C1N55_RS10340 PF00892 EamA-like transporter family C1N55_RS10345 PF03989 DNA gyrase C-terminal domain, beta-propeller C1N55_RS10345 PF00521 DNA gyrase/topoisomerase IV, subunit A C1N55_RS10350 PF00986 DNA gyrase B subunit, carboxyl terminus C1N55_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS10350 PF01751 Toprim domain C1N55_RS10350 PF00204 DNA gyrase B C1N55_RS10355 PF02660 Glycerol-3-phosphate acyltransferase C1N55_RS10360 PF01521 Iron-sulphur cluster biosynthesis C1N55_RS10365 PF13344 Haloacid dehalogenase-like hydrolase C1N55_RS10365 PF00293 NUDIX domain C1N55_RS10370 PF03358 NADPH-dependent FMN reductase C1N55_RS10380 PF07969 Amidohydrolase family C1N55_RS10385 PF04294 VanW like protein C1N55_RS10390 PF05504 Spore germination B3/ GerAC like, C-terminal C1N55_RS10400 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS10405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS10405 PF00672 HAMP domain C1N55_RS10405 PF02743 Cache domain C1N55_RS10410 PF04294 VanW like protein C1N55_RS10420 PF07859 alpha/beta hydrolase fold C1N55_RS10435 PF01551 Peptidase family M23 C1N55_RS10440 PF13673 Acetyltransferase (GNAT) domain C1N55_RS10450 PF08338 Domain of unknown function (DUF1731) C1N55_RS10450 PF01370 NAD dependent epimerase/dehydratase family C1N55_RS10460 PF01022 Bacterial regulatory protein, arsR family C1N55_RS10465 PF00403 Heavy-metal-associated domain C1N55_RS10490 PF07690 Major Facilitator Superfamily C1N55_RS10495 PF01144 Coenzyme A transferase C1N55_RS10500 PF01144 Coenzyme A transferase C1N55_RS10510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1N55_RS10510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1N55_RS10520 PF00753 Metallo-beta-lactamase superfamily C1N55_RS10525 PF04204 Homoserine O-succinyltransferase C1N55_RS10540 PF03061 Thioesterase superfamily C1N55_RS10545 PF01070 FMN-dependent dehydrogenase C1N55_RS10555 PF00491 Arginase family C1N55_RS10560 PF01979 Amidohydrolase family C1N55_RS10565 PF17392 Urocanase C-terminal domain C1N55_RS10565 PF01175 Urocanase Rossmann-like domain C1N55_RS10565 PF17391 Urocanase N-terminal domain C1N55_RS10570 PF00221 Aromatic amino acid lyase C1N55_RS10575 PF09021 HutP C1N55_RS10595 PF01541 GIY-YIG catalytic domain C1N55_RS10605 PF00474 Sodium:solute symporter family C1N55_RS10630 PF00149 Calcineurin-like phosphoesterase C1N55_RS10630 PF02872 5'-nucleotidase, C-terminal domain C1N55_RS10635 PF00330 Aconitase family (aconitate hydratase) C1N55_RS10635 PF00694 Aconitase C-terminal domain C1N55_RS10655 PF08756 YfkB-like domain C1N55_RS10655 PF04055 Radical SAM superfamily C1N55_RS10670 PF00694 Aconitase C-terminal domain C1N55_RS10675 PF00330 Aconitase family (aconitate hydratase) C1N55_RS10680 PF00180 Isocitrate/isopropylmalate dehydrogenase C1N55_RS10685 PF08502 LeuA allosteric (dimerisation) domain C1N55_RS10685 PF00682 HMGL-like C1N55_RS10690 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C1N55_RS10690 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C1N55_RS10695 PF01842 ACT domain C1N55_RS10695 PF10369 Small subunit of acetolactate synthase C1N55_RS10700 PF00205 Thiamine pyrophosphate enzyme, central domain C1N55_RS10700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1N55_RS10700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1N55_RS10705 PF00920 Dehydratase family C1N55_RS10710 PF04226 Transglycosylase associated protein C1N55_RS10720 PF01741 Large-conductance mechanosensitive channel, MscL C1N55_RS10725 PF01053 Cys/Met metabolism PLP-dependent enzyme C1N55_RS10730 PF00571 CBS domain C1N55_RS10735 PF02630 SCO1/SenC C1N55_RS10755 PF11084 Protein of unknown function (DUF2621) C1N55_RS10760 PF07301 Protein of unknown function (DUF1453) C1N55_RS10765 PF00072 Response regulator receiver domain C1N55_RS10770 PF02683 Cytochrome C biogenesis protein transmembrane region C1N55_RS10775 PF00892 EamA-like transporter family C1N55_RS10780 PF00664 ABC transporter transmembrane region C1N55_RS10780 PF00005 ABC transporter C1N55_RS10785 PF00664 ABC transporter transmembrane region C1N55_RS10785 PF00005 ABC transporter C1N55_RS10800 PF13732 Domain of unknown function (DUF4162) C1N55_RS10800 PF00005 ABC transporter C1N55_RS10815 PF07859 alpha/beta hydrolase fold C1N55_RS10830 PF05816 Toxic anion resistance protein (TelA) C1N55_RS10855 PF00266 Aminotransferase class-V C1N55_RS10860 PF16916 Dimerisation domain of Zinc Transporter C1N55_RS10860 PF01545 Cation efflux family C1N55_RS10865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1N55_RS10865 PF09180 Prolyl-tRNA synthetase, C-terminal C1N55_RS10865 PF03129 Anticodon binding domain C1N55_RS10880 PF00672 HAMP domain C1N55_RS10880 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS10895 PF03764 Elongation factor G, domain IV C1N55_RS10895 PF00009 Elongation factor Tu GTP binding domain C1N55_RS10895 PF00679 Elongation factor G C-terminus C1N55_RS10895 PF14492 Elongation Factor G, domain II C1N55_RS10900 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1N55_RS10900 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1N55_RS10935 PF01022 Bacterial regulatory protein, arsR family C1N55_RS10940 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1N55_RS10945 PF02040 Arsenical pump membrane protein C1N55_RS10950 PF06039 Malate:quinone oxidoreductase (Mqo) C1N55_RS10955 PF13460 NAD(P)H-binding C1N55_RS10965 PF12787 EcsC protein family C1N55_RS10970 PF01842 ACT domain C1N55_RS10970 PF00551 Formyl transferase C1N55_RS10980 PF00117 Glutamine amidotransferase class-I C1N55_RS10985 PF00425 chorismate binding enzyme C1N55_RS10985 PF04715 Anthranilate synthase component I, N terminal region C1N55_RS10990 PF05199 GMC oxidoreductase C1N55_RS10990 PF00732 GMC oxidoreductase C1N55_RS10995 PF13618 Gluconate 2-dehydrogenase subunit 3 C1N55_RS11010 PF16925 Tetracyclin repressor-like, C-terminal domain C1N55_RS11010 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS11015 PF02803 Thiolase, C-terminal domain C1N55_RS11015 PF00108 Thiolase, N-terminal domain C1N55_RS11035 PF00753 Metallo-beta-lactamase superfamily C1N55_RS11040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS11045 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS11045 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS11050 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS11055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS11055 PF00005 ABC transporter C1N55_RS11060 PF00501 AMP-binding enzyme C1N55_RS11060 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS11065 PF07690 Major Facilitator Superfamily C1N55_RS11080 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS11080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS11080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS11085 PF00561 alpha/beta hydrolase fold C1N55_RS11085 PF00364 Biotin-requiring enzyme C1N55_RS11090 PF01546 Peptidase family M20/M25/M40 C1N55_RS11090 PF07687 Peptidase dimerisation domain C1N55_RS11100 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C1N55_RS11100 PF02790 Cytochrome C oxidase subunit II, transmembrane domain C1N55_RS11105 PF00115 Cytochrome C and Quinol oxidase polypeptide I C1N55_RS11110 PF00510 Cytochrome c oxidase subunit III C1N55_RS11115 PF03626 Prokaryotic Cytochrome C oxidase subunit IV C1N55_RS11125 PF00072 Response regulator receiver domain C1N55_RS11130 PF01156 Inosine-uridine preferring nucleoside hydrolase C1N55_RS11135 PF00881 Nitroreductase family C1N55_RS11160 PF05036 Sporulation related domain C1N55_RS11160 PF01520 N-acetylmuramoyl-L-alanine amidase C1N55_RS11165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1N55_RS11175 PF00355 Rieske [2Fe-2S] domain C1N55_RS11180 PF18267 Rubredoxin NAD+ reductase C-terminal domain C1N55_RS11180 PF04324 BFD-like [2Fe-2S] binding domain C1N55_RS11180 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS11180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1N55_RS11180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1N55_RS11185 PF02602 Uroporphyrinogen-III synthase HemD C1N55_RS11210 PF04070 Domain of unknown function (DUF378) C1N55_RS11220 PF00194 Eukaryotic-type carbonic anhydrase C1N55_RS11225 PF11079 Bacterial protein YqhG of unknown function C1N55_RS11230 PF00271 Helicase conserved C-terminal domain C1N55_RS11230 PF00176 SNF2 family N-terminal domain C1N55_RS11250 PF07690 Major Facilitator Superfamily C1N55_RS11265 PF00149 Calcineurin-like phosphoesterase C1N55_RS11280 PF03475 3-alpha domain C1N55_RS11280 PF03473 MOSC domain C1N55_RS11285 PF00108 Thiolase, N-terminal domain C1N55_RS11285 PF02803 Thiolase, C-terminal domain C1N55_RS11290 PF00106 short chain dehydrogenase C1N55_RS11300 PF01063 Amino-transferase class IV C1N55_RS11325 PF00571 CBS domain C1N55_RS11325 PF01595 Cyclin M transmembrane N-terminal domain C1N55_RS11325 PF03471 Transporter associated domain C1N55_RS11330 PF13411 MerR HTH family regulatory protein C1N55_RS11335 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal C1N55_RS11335 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal C1N55_RS11340 PF07995 Glucose / Sorbosone dehydrogenase C1N55_RS11345 PF01430 Hsp33 protein C1N55_RS11350 PF01047 MarR family C1N55_RS11365 PF00696 Amino acid kinase family C1N55_RS11365 PF01472 PUA domain C1N55_RS11370 PF00171 Aldehyde dehydrogenase family C1N55_RS11385 PF00206 Lyase C1N55_RS11385 PF14698 Argininosuccinate lyase C-terminal C1N55_RS11390 PF00764 Arginosuccinate synthase C1N55_RS11395 PF00106 short chain dehydrogenase C1N55_RS11410 PF02082 Transcriptional regulator C1N55_RS11415 PF00970 Oxidoreductase FAD-binding domain C1N55_RS11415 PF00042 Globin C1N55_RS11415 PF00175 Oxidoreductase NAD-binding domain C1N55_RS11420 PF00753 Metallo-beta-lactamase superfamily C1N55_RS11425 PF03807 NADP oxidoreductase coenzyme F420-dependent C1N55_RS11425 PF14748 Pyrroline-5-carboxylate reductase dimerisation C1N55_RS11435 PF00753 Metallo-beta-lactamase superfamily C1N55_RS11435 PF12706 Beta-lactamase superfamily domain C1N55_RS11440 PF11799 impB/mucB/samB family C-terminal domain C1N55_RS11440 PF00817 impB/mucB/samB family C1N55_RS11440 PF11798 IMS family HHH motif C1N55_RS11450 PF00581 Rhodanese-like domain C1N55_RS11450 PF17773 UPF0176 acylphosphatase like domain C1N55_RS11450 PF12368 Rhodanase C-terminal C1N55_RS11455 PF02632 BioY family C1N55_RS11460 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) C1N55_RS11465 PF01494 FAD binding domain C1N55_RS11470 PF01872 RibD C-terminal domain C1N55_RS11470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1N55_RS11475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1N55_RS11475 PF00925 GTP cyclohydrolase II C1N55_RS11480 PF02645 Uncharacterised protein, DegV family COG1307 C1N55_RS11490 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1N55_RS11490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1N55_RS11490 PF11490 DNA polymerase III polC-type N-terminus II C1N55_RS11490 PF02811 PHP domain C1N55_RS11490 PF00929 Exonuclease C1N55_RS11490 PF01336 OB-fold nucleic acid binding domain C1N55_RS11490 PF14579 Helix-hairpin-helix motif C1N55_RS11500 PF00909 Ammonium Transporter Family C1N55_RS11505 PF07501 G5 domain C1N55_RS11505 PF03990 G5-linked-Ubiquitin-like domain C1N55_RS11505 PF06725 3D domain C1N55_RS11515 PF02954 Bacterial regulatory protein, Fis family C1N55_RS11515 PF13426 PAS domain C1N55_RS11515 PF00158 Sigma-54 interaction domain C1N55_RS11530 PF00478 IMP dehydrogenase / GMP reductase domain C1N55_RS11540 PF10502 Signal peptidase, peptidase S26 C1N55_RS11545 PF00005 ABC transporter C1N55_RS11550 PF03358 NADPH-dependent FMN reductase C1N55_RS11560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C1N55_RS11560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C1N55_RS11575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1N55_RS11580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C1N55_RS11590 PF09335 SNARE associated Golgi protein C1N55_RS11600 PF01546 Peptidase family M20/M25/M40 C1N55_RS11600 PF07687 Peptidase dimerisation domain C1N55_RS11610 PF00732 GMC oxidoreductase C1N55_RS11610 PF05199 GMC oxidoreductase C1N55_RS11625 PF00902 Sec-independent protein translocase protein (TatC) C1N55_RS11630 PF02416 mttA/Hcf106 family C1N55_RS11635 PF02416 mttA/Hcf106 family C1N55_RS11640 PF01039 Carboxyl transferase domain C1N55_RS11650 PF06081 Aromatic acid exporter family member 1 C1N55_RS11650 PF11728 Putative aromatic acid exporter C-terminal domain C1N55_RS11655 PF06491 Disulphide isomerase C1N55_RS11665 PF01642 Methylmalonyl-CoA mutase C1N55_RS11665 PF02310 B12 binding domain C1N55_RS11670 PF02310 B12 binding domain C1N55_RS11670 PF01642 Methylmalonyl-CoA mutase C1N55_RS11675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C1N55_RS11675 PF00364 Biotin-requiring enzyme C1N55_RS11675 PF02817 e3 binding domain C1N55_RS11680 PF02780 Transketolase, C-terminal domain C1N55_RS11680 PF02779 Transketolase, pyrimidine binding domain C1N55_RS11685 PF00676 Dehydrogenase E1 component C1N55_RS11690 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS11690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C1N55_RS11695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1N55_RS11695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1N55_RS11705 PF03009 Glycerophosphoryl diester phosphodiesterase family C1N55_RS11715 PF03746 LamB/YcsF family C1N55_RS11720 PF02682 Carboxyltransferase domain, subdomain C and D C1N55_RS11725 PF02626 Carboxyltransferase domain, subdomain A and B C1N55_RS11735 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like C1N55_RS11740 PF13180 PDZ domain C1N55_RS11745 PF08769 Sporulation initiation factor Spo0A C terminal C1N55_RS11745 PF00072 Response regulator receiver domain C1N55_RS11750 PF17820 PDZ domain C1N55_RS11750 PF05580 SpoIVB peptidase S55 C1N55_RS11755 PF13476 AAA domain C1N55_RS11760 PF02863 Arginine repressor, C-terminal domain C1N55_RS11760 PF01316 Arginine repressor, DNA binding domain C1N55_RS11765 PF01728 FtsJ-like methyltransferase C1N55_RS11765 PF01479 S4 domain C1N55_RS11770 PF02779 Transketolase, pyrimidine binding domain C1N55_RS11770 PF02780 Transketolase, C-terminal domain C1N55_RS11770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C1N55_RS11775 PF00348 Polyprenyl synthetase C1N55_RS11780 PF02609 Exonuclease VII small subunit C1N55_RS11785 PF02601 Exonuclease VII, large subunit C1N55_RS11785 PF13742 OB-fold nucleic acid binding domain C1N55_RS11790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C1N55_RS11790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C1N55_RS11795 PF01029 NusB family C1N55_RS11805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C1N55_RS11805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C1N55_RS11815 PF03780 Asp23 family, cell envelope-related function C1N55_RS11820 PF00296 Luciferase-like monooxygenase C1N55_RS11825 PF02785 Biotin carboxylase C-terminal domain C1N55_RS11825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1N55_RS11825 PF00289 Biotin carboxylase, N-terminal domain C1N55_RS11830 PF00364 Biotin-requiring enzyme C1N55_RS11835 PF12685 SpoIIIAH-like protein C1N55_RS11860 PF09285 Elongation factor P, C-terminal C1N55_RS11860 PF01132 Elongation factor P (EF-P) OB domain C1N55_RS11860 PF08207 Elongation factor P (EF-P) KOW-like domain C1N55_RS11865 PF00557 Metallopeptidase family M24 C1N55_RS11865 PF01321 Creatinase/Prolidase N-terminal domain C1N55_RS11870 PF01220 Dehydroquinase class II C1N55_RS11880 PF07136 Protein of unknown function (DUF1385) C1N55_RS11885 PF01925 Sulfite exporter TauE/SafE C1N55_RS11895 PF03099 Biotin/lipoate A/B protein ligase family C1N55_RS11900 PF00581 Rhodanese-like domain C1N55_RS11905 PF02347 Glycine cleavage system P-protein C1N55_RS11910 PF02347 Glycine cleavage system P-protein C1N55_RS11915 PF08669 Glycine cleavage T-protein C-terminal barrel domain C1N55_RS11915 PF01571 Aminomethyltransferase folate-binding domain C1N55_RS11920 PF01202 Shikimate kinase C1N55_RS11945 PF07963 Prokaryotic N-terminal methylation motif C1N55_RS11950 PF00482 Type II secretion system (T2SS), protein F C1N55_RS11955 PF00437 Type II/IV secretion system protein C1N55_RS11965 PF11117 Protein of unknown function (DUF2626) C1N55_RS11970 PF00753 Metallo-beta-lactamase superfamily C1N55_RS11975 PF10958 Protein of unknown function (DUF2759) C1N55_RS11980 PF00884 Sulfatase C1N55_RS11990 PF01812 5-formyltetrahydrofolate cyclo-ligase family C1N55_RS11995 PF00471 Ribosomal protein L33 C1N55_RS12010 PF03466 LysR substrate binding domain C1N55_RS12010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS12015 PF07690 Major Facilitator Superfamily C1N55_RS12020 PF00255 Glutathione peroxidase C1N55_RS12030 PF08281 Sigma-70, region 4 C1N55_RS12030 PF04542 Sigma-70 region 2 C1N55_RS12040 PF00117 Glutamine amidotransferase class-I C1N55_RS12040 PF02885 Glycosyl transferase family, helical bundle domain C1N55_RS12040 PF00591 Glycosyl transferase family, a/b domain C1N55_RS12045 PF04715 Anthranilate synthase component I, N terminal region C1N55_RS12045 PF00425 chorismate binding enzyme C1N55_RS12055 PF01895 PhoU domain C1N55_RS12060 PF00005 ABC transporter C1N55_RS12065 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS12070 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS12075 PF12849 PBP superfamily domain C1N55_RS12080 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS12080 PF03717 Penicillin-binding Protein dimerisation domain C1N55_RS12095 PF00005 ABC transporter C1N55_RS12100 PF00072 Response regulator receiver domain C1N55_RS12100 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS12105 PF07730 Histidine kinase C1N55_RS12115 PF01717 Cobalamin-independent synthase, Catalytic domain C1N55_RS12120 PF01435 Peptidase family M48 C1N55_RS12120 PF16491 CAAX prenyl protease N-terminal, five membrane helices C1N55_RS12125 PF16242 Pyridoxamine 5'-phosphate oxidase like C1N55_RS12130 PF01734 Patatin-like phospholipase C1N55_RS12140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C1N55_RS12140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C1N55_RS12145 PF04306 Protein of unknown function (DUF456) C1N55_RS12160 PF04551 GcpE protein C1N55_RS12170 PF08447 PAS fold C1N55_RS12170 PF00563 EAL domain C1N55_RS12170 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS12170 PF08448 PAS fold C1N55_RS12175 PF01610 Transposase C1N55_RS12175 PF13683 Integrase core domain C1N55_RS12185 PF00375 Sodium:dicarboxylate symporter family C1N55_RS12215 PF02654 Cobalamin-5-phosphate synthase C1N55_RS12225 PF01497 Periplasmic binding protein C1N55_RS12235 PF01475 Ferric uptake regulator family C1N55_RS12240 PF00950 ABC 3 transport family C1N55_RS12245 PF00005 ABC transporter C1N55_RS12255 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C1N55_RS12260 PF01261 Xylose isomerase-like TIM barrel C1N55_RS12265 PF00270 DEAD/DEAH box helicase C1N55_RS12265 PF00271 Helicase conserved C-terminal domain C1N55_RS12270 PF02401 LytB protein C1N55_RS12280 PF04703 FaeA-like protein C1N55_RS12280 PF00072 Response regulator receiver domain C1N55_RS12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS12285 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C1N55_RS12285 PF17203 Single cache domain 3 C1N55_RS12290 PF03480 Bacterial extracellular solute-binding protein, family 7 C1N55_RS12295 PF00375 Sodium:dicarboxylate symporter family C1N55_RS12305 PF01784 NIF3 (NGG1p interacting factor 3) C1N55_RS12310 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C1N55_RS12320 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS12320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS12320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS12330 PF04545 Sigma-70, region 4 C1N55_RS12330 PF04542 Sigma-70 region 2 C1N55_RS12330 PF00140 Sigma-70 factor, region 1.2 C1N55_RS12330 PF03979 Sigma-70 factor, region 1.1 C1N55_RS12330 PF04539 Sigma-70 region 3 C1N55_RS12335 PF10410 DnaB-helicase binding domain of primase C1N55_RS12335 PF08275 DNA primase catalytic core, N-terminal domain C1N55_RS12335 PF01807 CHC2 zinc finger C1N55_RS12340 PF03618 Kinase/pyrophosphorylase C1N55_RS12345 PF08279 HTH domain C1N55_RS12345 PF00571 CBS domain C1N55_RS12350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1N55_RS12350 PF03129 Anticodon binding domain C1N55_RS12360 PF11967 Recombination protein O N terminal C1N55_RS12360 PF02565 Recombination protein O C terminal C1N55_RS12365 PF01926 50S ribosome-binding GTPase C1N55_RS12365 PF07650 KH domain C1N55_RS12370 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1N55_RS12375 PF01219 Prokaryotic diacylglycerol kinase C1N55_RS12380 PF02130 Uncharacterized protein family UPF0054 C1N55_RS12385 PF07698 7TM receptor with intracellular HD hydrolase C1N55_RS12385 PF07697 7TM-HD extracellular C1N55_RS12385 PF01966 HD domain C1N55_RS12390 PF02562 PhoH-like protein C1N55_RS12410 PF12127 SigmaW regulon antibacterial C1N55_RS12415 PF01972 Serine dehydrogenase proteinase C1N55_RS12415 PF01957 NfeD-like C-terminal, partner-binding C1N55_RS12420 PF01610 Transposase C1N55_RS12420 PF13683 Integrase core domain C1N55_RS12425 PF01165 Ribosomal protein S21 C1N55_RS12430 PF01791 DeoC/LacD family aldolase C1N55_RS12435 PF04055 Radical SAM superfamily C1N55_RS12435 PF01938 TRAM domain C1N55_RS12435 PF00919 Uncharacterized protein family UPF0004 C1N55_RS12440 PF04452 RNA methyltransferase C1N55_RS12450 PF00684 DnaJ central domain C1N55_RS12450 PF01556 DnaJ C terminal domain C1N55_RS12450 PF00226 DnaJ domain C1N55_RS12455 PF00012 Hsp70 protein C1N55_RS12460 PF01025 GrpE C1N55_RS12465 PF01628 HrcA protein C terminal domain C1N55_RS12470 PF06969 HemN C-terminal domain C1N55_RS12470 PF04055 Radical SAM superfamily C1N55_RS12480 PF00009 Elongation factor Tu GTP binding domain C1N55_RS12480 PF03144 Elongation factor Tu domain 2 C1N55_RS12480 PF06421 GTP-binding protein LepA C-terminus C1N55_RS12480 PF00679 Elongation factor G C-terminus C1N55_RS12490 PF03418 Germination protease C1N55_RS12495 PF01649 Ribosomal protein S20 C1N55_RS12510 PF06144 DNA polymerase III, delta subunit C1N55_RS12520 PF13567 Domain of unknown function (DUF4131) C1N55_RS12520 PF03772 Competence protein C1N55_RS12520 PF00753 Metallo-beta-lactamase superfamily C1N55_RS12525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C1N55_RS12530 PF10531 SLBB domain C1N55_RS12535 PF13649 Methyltransferase domain C1N55_RS12545 PF01966 HD domain C1N55_RS12550 PF01467 Cytidylyltransferase-like C1N55_RS12555 PF01985 CRS1 / YhbY (CRM) domain C1N55_RS12560 PF08501 Shikimate dehydrogenase substrate binding domain C1N55_RS12560 PF01488 Shikimate / quinate 5-dehydrogenase C1N55_RS12560 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C1N55_RS12565 PF01926 50S ribosome-binding GTPase C1N55_RS12575 PF02666 Phosphatidylserine decarboxylase C1N55_RS12580 PF01066 CDP-alcohol phosphatidyltransferase C1N55_RS12585 PF04545 Sigma-70, region 4 C1N55_RS12585 PF04542 Sigma-70 region 2 C1N55_RS12590 PF01048 Phosphorylase superfamily C1N55_RS12600 PF01272 Transcription elongation factor, GreA/GreB, C-term C1N55_RS12600 PF03449 Transcription elongation factor, N-terminal C1N55_RS12605 PF00485 Phosphoribulokinase / Uridine kinase family C1N55_RS12610 PF16325 Peptidase family U32 C-terminal domain C1N55_RS12610 PF01136 Peptidase family U32 C1N55_RS12615 PF01136 Peptidase family U32 C1N55_RS12620 PF01596 O-methyltransferase C1N55_RS12625 PF02618 YceG-like family C1N55_RS12630 PF06949 Protein of unknown function (DUF1292) C1N55_RS12635 PF06949 Protein of unknown function (DUF1292) C1N55_RS12640 PF03652 Holliday junction resolvase C1N55_RS12645 PF06135 IreB regulatory phosphoprotein C1N55_RS12650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1N55_RS12650 PF01411 tRNA synthetases class II (A) C1N55_RS12660 PF03741 Integral membrane protein TerC family C1N55_RS12665 PF12832 MFS_1 like family C1N55_RS12670 PF07070 SpoOM protein C1N55_RS12685 PF13538 UvrD-like helicase C-terminal domain C1N55_RS12685 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C1N55_RS12685 PF14490 Helix-hairpin-helix containing domain C1N55_RS12690 PF00977 Histidine biosynthesis protein C1N55_RS12695 PF07662 Na+ dependent nucleoside transporter C-terminus C1N55_RS12695 PF01773 Na+ dependent nucleoside transporter N-terminus C1N55_RS12710 PF00266 Aminotransferase class-V C1N55_RS12715 PF02082 Transcriptional regulator C1N55_RS12720 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1N55_RS12720 PF12002 MgsA AAA+ ATPase C terminal C1N55_RS12720 PF16193 AAA C-terminal domain C1N55_RS12730 PF12841 YvrJ protein family C1N55_RS12735 PF04545 Sigma-70, region 4 C1N55_RS12750 PF02743 Cache domain C1N55_RS12750 PF00672 HAMP domain C1N55_RS12750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS12755 PF00899 ThiF family C1N55_RS12765 PF00872 Transposase, Mutator family C1N55_RS12770 PF01336 OB-fold nucleic acid binding domain C1N55_RS12770 PF02938 GAD domain C1N55_RS12770 PF00152 tRNA synthetases class II (D, K and N) C1N55_RS12775 PF03129 Anticodon binding domain C1N55_RS12775 PF13393 Histidyl-tRNA synthetase C1N55_RS12780 PF01520 N-acetylmuramoyl-L-alanine amidase C1N55_RS12780 PF08239 Bacterial SH3 domain C1N55_RS12785 PF02580 D-Tyr-tRNA(Tyr) deacylase C1N55_RS12790 PF04607 Region found in RelA / SpoT proteins C1N55_RS12790 PF13291 ACT domain C1N55_RS12790 PF02824 TGS domain C1N55_RS12795 PF00535 Glycosyl transferase family 2 C1N55_RS12800 PF00156 Phosphoribosyl transferase domain C1N55_RS12805 PF01368 DHH family C1N55_RS12805 PF02272 DHHA1 domain C1N55_RS12805 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C1N55_RS12805 PF17768 RecJ OB domain C1N55_RS12810 PF07549 SecD/SecF GG Motif C1N55_RS12810 PF02355 Protein export membrane protein C1N55_RS12820 PF01943 Polysaccharide biosynthesis protein C1N55_RS12820 PF14667 Polysaccharide biosynthesis C-terminal domain C1N55_RS12825 PF04239 Protein of unknown function (DUF421) C1N55_RS12830 PF02699 Preprotein translocase subunit C1N55_RS12835 PF01702 Queuine tRNA-ribosyltransferase C1N55_RS12840 PF02547 Queuosine biosynthesis protein C1N55_RS12845 PF17864 RuvB AAA lid domain C1N55_RS12845 PF05491 RuvB C-terminal winged helix domain C1N55_RS12845 PF05496 Holliday junction DNA helicase RuvB P-loop domain C1N55_RS12850 PF07499 RuvA, C-terminal domain C1N55_RS12850 PF01330 RuvA N terminal domain C1N55_RS12865 PF02829 3H domain C1N55_RS12865 PF08279 HTH domain C1N55_RS12875 PF00800 Prephenate dehydratase C1N55_RS12875 PF01842 ACT domain C1N55_RS12885 PF01926 50S ribosome-binding GTPase C1N55_RS12885 PF09269 Domain of unknown function (DUF1967) C1N55_RS12885 PF01018 GTP1/OBG C1N55_RS12895 PF01016 Ribosomal L27 protein C1N55_RS12905 PF00829 Ribosomal prokaryotic L21 protein C1N55_RS12920 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C1N55_RS12925 PF03775 Septum formation inhibitor MinC, C-terminal domain C1N55_RS12935 PF04085 rod shape-determining protein MreC C1N55_RS12945 PF04002 RadC-like JAB domain C1N55_RS12950 PF02545 Maf-like protein C1N55_RS12960 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS12960 PF08245 Mur ligase middle domain C1N55_RS12965 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS12965 PF08245 Mur ligase middle domain C1N55_RS12970 PF10458 Valyl tRNA synthetase tRNA binding arm C1N55_RS12970 PF00133 tRNA synthetases class I (I, L, M and V) C1N55_RS12970 PF08264 Anticodon-binding domain of tRNA C1N55_RS12980 PF00202 Aminotransferase class-III C1N55_RS12985 PF00490 Delta-aminolevulinic acid dehydratase C1N55_RS12995 PF03900 Porphobilinogen deaminase, C-terminal domain C1N55_RS12995 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C1N55_RS13000 PF01578 Cytochrome C assembly protein C1N55_RS13005 PF01488 Shikimate / quinate 5-dehydrogenase C1N55_RS13005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C1N55_RS13005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C1N55_RS13010 PF01926 50S ribosome-binding GTPase C1N55_RS13015 PF00004 ATPase family associated with various cellular activities (AAA) C1N55_RS13015 PF05362 Lon protease (S16) C-terminal proteolytic domain C1N55_RS13015 PF02190 ATP-dependent protease La (LON) substrate-binding domain C1N55_RS13020 PF07724 AAA domain (Cdc48 subfamily) C1N55_RS13020 PF06689 ClpX C4-type zinc finger C1N55_RS13020 PF10431 C-terminal, D2-small domain, of ClpB protein C1N55_RS13025 PF05698 Bacterial trigger factor protein (TF) C-terminus C1N55_RS13025 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C1N55_RS13025 PF05697 Bacterial trigger factor protein (TF) C1N55_RS13045 PF03551 Transcriptional regulator PadR-like family C1N55_RS13060 PF03006 Haemolysin-III related C1N55_RS13065 PF07690 Major Facilitator Superfamily C1N55_RS13070 PF00582 Universal stress protein family C1N55_RS13080 PF00877 NlpC/P60 family C1N55_RS13080 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain C1N55_RS13090 PF17676 LD-carboxypeptidase C-terminal domain C1N55_RS13090 PF02016 LD-carboxypeptidase N-terminal domain C1N55_RS13095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS13095 PF00005 ABC transporter C1N55_RS13100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS13100 PF00005 ABC transporter C1N55_RS13105 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS13105 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS13115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS13120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C1N55_RS13120 PF13378 Enolase C-terminal domain-like C1N55_RS13130 PF01427 D-ala-D-ala dipeptidase C1N55_RS13135 PF03576 Peptidase family S58 C1N55_RS13160 PF00072 Response regulator receiver domain C1N55_RS13160 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS13165 PF05525 Branched-chain amino acid transport protein C1N55_RS13175 PF07662 Na+ dependent nucleoside transporter C-terminus C1N55_RS13175 PF01773 Na+ dependent nucleoside transporter N-terminus C1N55_RS13185 PF01872 RibD C-terminal domain C1N55_RS13195 PF00872 Transposase, Mutator family C1N55_RS13210 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS13215 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS13215 PF07729 FCD domain C1N55_RS13225 PF13443 Cro/C1-type HTH DNA-binding domain C1N55_RS13230 PF11188 Protein of unknown function (DUF2975) C1N55_RS13255 PF00266 Aminotransferase class-V C1N55_RS13260 PF02660 Glycerol-3-phosphate acyltransferase C1N55_RS13270 PF00107 Zinc-binding dehydrogenase C1N55_RS13270 PF08240 Alcohol dehydrogenase GroES-like domain C1N55_RS13270 PF00698 Acyl transferase domain C1N55_RS13270 PF00109 Beta-ketoacyl synthase, N-terminal domain C1N55_RS13270 PF02801 Beta-ketoacyl synthase, C-terminal domain C1N55_RS13270 PF16197 Ketoacyl-synthetase C-terminal extension C1N55_RS13270 PF14765 Polyketide synthase dehydratase C1N55_RS13270 PF00550 Phosphopantetheine attachment site C1N55_RS13270 PF08659 KR domain C1N55_RS13275 PF00293 NUDIX domain C1N55_RS13300 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS13360 PF01520 N-acetylmuramoyl-L-alanine amidase C1N55_RS13360 PF05036 Sporulation related domain C1N55_RS13365 PF05105 Bacteriophage holin family C1N55_RS13390 PF10711 Hypothetical protein (DUF2513) C1N55_RS13480 PF04233 Phage Mu protein F like protein C1N55_RS13480 PF03496 ADP-ribosyltransferase exoenzyme C1N55_RS13490 PF04466 Phage terminase large subunit C1N55_RS13490 PF17288 Terminase RNAseH like domain C1N55_RS13495 PF03592 Terminase small subunit C1N55_RS13495 PF10668 Phage terminase small subunit C1N55_RS13535 PF03838 Recombination protein U C1N55_RS13575 PF00436 Single-strand binding protein family C1N55_RS13605 PF01695 IstB-like ATP binding protein C1N55_RS13630 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C1N55_RS13630 PF18277 AbrB C-terminal domain C1N55_RS13660 PF01726 LexA DNA binding domain C1N55_RS13660 PF00717 Peptidase S24-like C1N55_RS13665 PF00589 Phage integrase family C1N55_RS13665 PF02899 Phage integrase, N-terminal SAM-like domain C1N55_RS13680 PF01725 Ham1 family C1N55_RS13685 PF03725 3' exoribonuclease family, domain 2 C1N55_RS13685 PF01138 3' exoribonuclease family, domain 1 C1N55_RS13690 PF01177 Asp/Glu/Hydantoin racemase C1N55_RS13695 PF01047 MarR family C1N55_RS13700 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS13705 PF03061 Thioesterase superfamily C1N55_RS13710 PF13085 2Fe-2S iron-sulfur cluster binding domain C1N55_RS13710 PF13183 4Fe-4S dicluster domain C1N55_RS13715 PF02910 Fumarate reductase flavoprotein C-term C1N55_RS13715 PF00890 FAD binding domain C1N55_RS13720 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C1N55_RS13725 PF10702 Protein of unknown function (DUF2507) C1N55_RS13730 PF13840 ACT domain C1N55_RS13730 PF00696 Amino acid kinase family C1N55_RS13735 PF08459 UvrC Helix-hairpin-helix N-terminal C1N55_RS13735 PF02151 UvrB/uvrC motif C1N55_RS13735 PF01541 GIY-YIG catalytic domain C1N55_RS13740 PF00085 Thioredoxin C1N55_RS13745 PF01012 Electron transfer flavoprotein domain C1N55_RS13745 PF00766 Electron transfer flavoprotein FAD-binding domain C1N55_RS13750 PF01012 Electron transfer flavoprotein domain C1N55_RS13755 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS13760 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS13760 PF08359 YsiA-like protein, C-terminal region C1N55_RS13765 PF00501 AMP-binding enzyme C1N55_RS13765 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS13770 PF03994 Domain of Unknown Function (DUF350) C1N55_RS13775 PF00488 MutS domain V C1N55_RS13775 PF01713 Smr domain C1N55_RS13780 PF14791 DNA polymerase beta thumb C1N55_RS13780 PF14716 Helix-hairpin-helix domain C1N55_RS13780 PF02811 PHP domain C1N55_RS13790 PF05164 Cell division protein ZapA C1N55_RS13795 PF01351 Ribonuclease HII C1N55_RS13795 PF11858 Domain of unknown function (DUF3378) C1N55_RS13800 PF00474 Sodium:solute symporter family C1N55_RS13815 PF03484 tRNA synthetase B5 domain C1N55_RS13815 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C1N55_RS13815 PF01588 Putative tRNA binding domain C1N55_RS13815 PF03483 B3/4 domain C1N55_RS13815 PF03147 Ferredoxin-fold anticodon binding domain C1N55_RS13820 PF01409 tRNA synthetases class II core domain (F) C1N55_RS13820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C1N55_RS13825 PF02743 Cache domain C1N55_RS13825 PF00672 HAMP domain C1N55_RS13825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS13830 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1N55_RS13830 PF00588 SpoU rRNA Methylase family C1N55_RS13835 PF00266 Aminotransferase class-V C1N55_RS13840 PF02910 Fumarate reductase flavoprotein C-term C1N55_RS13840 PF00890 FAD binding domain C1N55_RS13845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C1N55_RS13845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C1N55_RS13850 PF02445 Quinolinate synthetase A protein C1N55_RS13860 PF14098 Small, acid-soluble spore protein I C1N55_RS13875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C1N55_RS13875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C1N55_RS13880 PF05343 M42 glutamyl aminopeptidase C1N55_RS13895 PF09334 tRNA synthetases class I (M) C1N55_RS13900 PF06961 Protein of unknown function (DUF1294) C1N55_RS13905 PF00453 Ribosomal protein L20 C1N55_RS13910 PF01632 Ribosomal protein L35 C1N55_RS13915 PF05198 Translation initiation factor IF-3, N-terminal domain C1N55_RS13915 PF00707 Translation initiation factor IF-3, C-terminal domain C1N55_RS13920 PF00534 Glycosyl transferases group 1 C1N55_RS13920 PF13439 Glycosyltransferase Family 4 C1N55_RS13925 PF05116 Sucrose-6F-phosphate phosphohydrolase C1N55_RS13930 PF02824 TGS domain C1N55_RS13930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C1N55_RS13930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C1N55_RS13930 PF03129 Anticodon binding domain C1N55_RS13935 PF01695 IstB-like ATP binding protein C1N55_RS13935 PF07319 Primosomal protein DnaI N-terminus C1N55_RS13940 PF07261 Replication initiation and membrane attachment C1N55_RS13945 PF03477 ATP cone domain C1N55_RS13950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1N55_RS13950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1N55_RS13955 PF01121 Dephospho-CoA kinase C1N55_RS13960 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C1N55_RS13960 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C1N55_RS13965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1N55_RS13965 PF00476 DNA polymerase family A C1N55_RS13965 PF01367 5'-3' exonuclease, C-terminal SAM fold C1N55_RS13990 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS13995 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS14010 PF00294 pfkB family carbohydrate kinase C1N55_RS14015 PF17912 MalK OB fold domain C1N55_RS14015 PF00005 ABC transporter C1N55_RS14015 PF03459 TOBE domain C1N55_RS14020 PF01145 SPFH domain / Band 7 family C1N55_RS14025 PF01145 SPFH domain / Band 7 family C1N55_RS14025 PF12221 Bacterial membrane protein N terminal C1N55_RS14030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS14030 PF00989 PAS fold C1N55_RS14030 PF16736 Single Cache-like C1N55_RS14030 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS14035 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS14035 PF00072 Response regulator receiver domain C1N55_RS14045 PF00056 lactate/malate dehydrogenase, NAD binding domain C1N55_RS14045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C1N55_RS14050 PF00180 Isocitrate/isopropylmalate dehydrogenase C1N55_RS14055 PF00285 Citrate synthase, C-terminal domain C1N55_RS14065 PF04186 FxsA cytoplasmic membrane protein C1N55_RS14070 PF00391 PEP-utilising enzyme, mobile domain C1N55_RS14070 PF00224 Pyruvate kinase, barrel domain C1N55_RS14070 PF02887 Pyruvate kinase, alpha/beta domain C1N55_RS14075 PF00365 Phosphofructokinase C1N55_RS14080 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C1N55_RS14085 PF01039 Carboxyl transferase domain C1N55_RS14085 PF17848 Acetyl-coA carboxylase zinc finger domain C1N55_RS14090 PF07729 FCD domain C1N55_RS14090 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS14095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C1N55_RS14095 PF14579 Helix-hairpin-helix motif C1N55_RS14095 PF02811 PHP domain C1N55_RS14095 PF07733 Bacterial DNA polymerase III alpha NTPase domain C1N55_RS14095 PF01336 OB-fold nucleic acid binding domain C1N55_RS14100 PF01368 DHH family C1N55_RS14100 PF02272 DHHA1 domain C1N55_RS14110 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS14110 PF07085 DRTGG domain C1N55_RS14110 PF00571 CBS domain C1N55_RS14110 PF03061 Thioesterase superfamily C1N55_RS14120 PF00557 Metallopeptidase family M24 C1N55_RS14120 PF01321 Creatinase/Prolidase N-terminal domain C1N55_RS14125 PF00005 ABC transporter C1N55_RS14130 PF00005 ABC transporter C1N55_RS14130 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1N55_RS14135 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS14135 PF11862 Domain of unknown function (DUF3382) C1N55_RS14140 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS14145 PF13458 Periplasmic binding protein C1N55_RS14150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C1N55_RS14150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C1N55_RS14155 PF00582 Universal stress protein family C1N55_RS14160 PF02384 N-6 DNA Methylase C1N55_RS14165 PF08534 Redoxin C1N55_RS14170 PF06271 RDD family C1N55_RS14175 PF01343 Peptidase family S49 C1N55_RS14180 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS14180 PF00501 AMP-binding enzyme C1N55_RS14185 PF00269 Small, acid-soluble spore proteins, alpha/beta type C1N55_RS14190 PF13683 Integrase core domain C1N55_RS14190 PF01610 Transposase C1N55_RS14195 PF00269 Small, acid-soluble spore proteins, alpha/beta type C1N55_RS14200 PF02568 Thiamine biosynthesis protein (ThiI) C1N55_RS14200 PF02926 THUMP domain C1N55_RS14205 PF00266 Aminotransferase class-V C1N55_RS14210 PF06160 Septation ring formation regulator, EzrA C1N55_RS14215 PF02811 PHP domain C1N55_RS14220 PF13185 GAF domain C1N55_RS14225 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS14230 PF00163 Ribosomal protein S4/S9 N-terminal domain C1N55_RS14230 PF01479 S4 domain C1N55_RS14235 PF01479 S4 domain C1N55_RS14235 PF00579 tRNA synthetases class I (W and Y) C1N55_RS14240 PF00912 Transglycosylase C1N55_RS14240 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS14245 PF00202 Aminotransferase class-III C1N55_RS14250 PF00696 Amino acid kinase family C1N55_RS14255 PF01960 ArgJ family C1N55_RS14260 PF01118 Semialdehyde dehydrogenase, NAD binding domain C1N55_RS14260 PF02774 Semialdehyde dehydrogenase, dimerisation domain C1N55_RS14265 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS14265 PF00501 AMP-binding enzyme C1N55_RS14270 PF00583 Acetyltransferase (GNAT) family C1N55_RS14275 PF00571 CBS domain C1N55_RS14280 PF00850 Histone deacetylase domain C1N55_RS14285 PF00356 Bacterial regulatory proteins, lacI family C1N55_RS14290 PF01817 Chorismate mutase type II C1N55_RS14290 PF00793 DAHP synthetase I family C1N55_RS14295 PF02491 SHS2 domain inserted in FTSA C1N55_RS14300 PF12732 YtxH-like protein C1N55_RS14305 PF06103 Bacterial protein of unknown function (DUF948) C1N55_RS14310 PF08245 Mur ligase middle domain C1N55_RS14310 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS14310 PF01225 Mur ligase family, catalytic domain C1N55_RS14315 PF17854 FtsK alpha domain C1N55_RS14315 PF01580 FtsK/SpoIIIE family C1N55_RS14315 PF09397 Ftsk gamma domain C1N55_RS14320 PF14794 Domain of unknown function (DUF4479) C1N55_RS14320 PF01588 Putative tRNA binding domain C1N55_RS14325 PF07285 Protein of unknown function (DUF1444) C1N55_RS14335 PF01931 Protein of unknown function DUF84 C1N55_RS14340 PF05343 M42 glutamyl aminopeptidase C1N55_RS14350 PF00753 Metallo-beta-lactamase superfamily C1N55_RS14355 PF02390 Putative methyltransferase C1N55_RS14360 PF00781 Diacylglycerol kinase catalytic domain C1N55_RS14370 PF01063 Amino-transferase class IV C1N55_RS14375 PF01546 Peptidase family M20/M25/M40 C1N55_RS14380 PF08220 DeoR-like helix-turn-helix domain C1N55_RS14385 PF00849 RNA pseudouridylate synthase C1N55_RS14385 PF01479 S4 domain C1N55_RS14390 PF01943 Polysaccharide biosynthesis protein C1N55_RS14390 PF14667 Polysaccharide biosynthesis C-terminal domain C1N55_RS14400 PF14824 Sirohaem biosynthesis protein central C1N55_RS14405 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C1N55_RS14405 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C1N55_RS14410 PF00258 Flavodoxin C1N55_RS14410 PF00667 FAD binding domain C1N55_RS14410 PF00175 Oxidoreductase NAD-binding domain C1N55_RS14420 PF01903 CbiX C1N55_RS14425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C1N55_RS14435 PF17785 PUA-like domain C1N55_RS14435 PF10672 S-adenosylmethionine-dependent methyltransferase C1N55_RS14440 PF07690 Major Facilitator Superfamily C1N55_RS14445 PF13603 Leucyl-tRNA synthetase, Domain 2 C1N55_RS14445 PF09334 tRNA synthetases class I (M) C1N55_RS14445 PF08264 Anticodon-binding domain of tRNA C1N55_RS14445 PF00133 tRNA synthetases class I (I, L, M and V) C1N55_RS14450 PF07690 Major Facilitator Superfamily C1N55_RS14455 PF04055 Radical SAM superfamily C1N55_RS14455 PF16199 Radical_SAM C-terminal domain C1N55_RS14460 PF06962 Putative rRNA methylase C1N55_RS14465 PF01235 Sodium:alanine symporter family C1N55_RS14470 PF12146 Serine aminopeptidase, S33 C1N55_RS14475 PF00132 Bacterial transferase hexapeptide (six repeats) C1N55_RS14485 PF02772 S-adenosylmethionine synthetase, central domain C1N55_RS14485 PF02773 S-adenosylmethionine synthetase, C-terminal domain C1N55_RS14485 PF00438 S-adenosylmethionine synthetase, N-terminal domain C1N55_RS14490 PF01293 Phosphoenolpyruvate carboxykinase C1N55_RS14495 PF00326 Prolyl oligopeptidase family C1N55_RS14500 PF00293 NUDIX domain C1N55_RS14510 PF00210 Ferritin-like domain C1N55_RS14515 PF01809 Putative membrane protein insertion efficiency factor C1N55_RS14520 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment C1N55_RS14520 PF01297 Zinc-uptake complex component A periplasmic C1N55_RS14525 PF00501 AMP-binding enzyme C1N55_RS14525 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS14530 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS14530 PF07694 5TMR of 5TMR-LYT C1N55_RS14540 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS14545 PF00561 alpha/beta hydrolase fold C1N55_RS14550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C1N55_RS14550 PF16582 Middle domain of thiamine pyrophosphate C1N55_RS14550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C1N55_RS14555 PF00425 chorismate binding enzyme C1N55_RS14560 PF01244 Membrane dipeptidase (Peptidase family M19) C1N55_RS14565 PF01258 Prokaryotic dksA/traR C4-type zinc finger C1N55_RS14570 PF13683 Integrase core domain C1N55_RS14570 PF01610 Transposase C1N55_RS14790 PF02308 MgtC family C1N55_RS14800 PF00465 Iron-containing alcohol dehydrogenase C1N55_RS14805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C1N55_RS14805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C1N55_RS14810 PF00171 Aldehyde dehydrogenase family C1N55_RS14815 PF02954 Bacterial regulatory protein, Fis family C1N55_RS14815 PF00158 Sigma-54 interaction domain C1N55_RS14815 PF13426 PAS domain C1N55_RS14820 PF00575 S1 RNA binding domain C1N55_RS14825 PF07883 Cupin domain C1N55_RS14825 PF01381 Helix-turn-helix C1N55_RS14835 PF00155 Aminotransferase class I and II C1N55_RS14845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C1N55_RS14850 PF07690 Major Facilitator Superfamily C1N55_RS14855 PF00912 Transglycosylase C1N55_RS14855 PF00905 Penicillin binding protein transpeptidase domain C1N55_RS14860 PF17328 Family of unknown function (DUF5366) C1N55_RS14865 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C1N55_RS14865 PF13244 Domain of unknown function (DUF4040) C1N55_RS14865 PF00361 Proton-conducting membrane transporter C1N55_RS14870 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter C1N55_RS14875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C1N55_RS14880 PF00361 Proton-conducting membrane transporter C1N55_RS14885 PF01899 Na+/H+ ion antiporter subunit C1N55_RS14890 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) C1N55_RS14895 PF03334 Na+/H+ antiporter subunit C1N55_RS14905 PF00883 Cytosol aminopeptidase family, catalytic domain C1N55_RS14905 PF02789 Cytosol aminopeptidase family, N-terminal domain C1N55_RS14910 PF02681 Divergent PAP2 family C1N55_RS14920 PF00293 NUDIX domain C1N55_RS14920 PF13344 Haloacid dehalogenase-like hydrolase C1N55_RS14925 PF01521 Iron-sulphur cluster biosynthesis C1N55_RS14935 PF01106 NifU-like domain C1N55_RS14940 PF07315 Protein of unknown function (DUF1462) C1N55_RS14945 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS14950 PF07293 Protein of unknown function (DUF1450) C1N55_RS14955 PF13344 Haloacid dehalogenase-like hydrolase C1N55_RS14960 PF01934 Protein of unknown function DUF86 C1N55_RS14970 PF07690 Major Facilitator Superfamily C1N55_RS14980 PF06265 Protein of unknown function (DUF1027) C1N55_RS14985 PF04055 Radical SAM superfamily C1N55_RS14985 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family C1N55_RS14990 PF09560 Sporulation protein YunB (Spo_YunB) C1N55_RS14995 PF11871 Domain of unknown function (DUF3391) C1N55_RS14995 PF01966 HD domain C1N55_RS15000 PF02872 5'-nucleotidase, C-terminal domain C1N55_RS15005 PF01925 Sulfite exporter TauE/SafE C1N55_RS15010 PF01904 Protein of unknown function DUF72 C1N55_RS15020 PF03358 NADPH-dependent FMN reductase C1N55_RS15030 PF00296 Luciferase-like monooxygenase C1N55_RS15035 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15040 PF00005 ABC transporter C1N55_RS15045 PF01687 Riboflavin kinase C1N55_RS15050 PF17850 CysA C-terminal regulatory domain C1N55_RS15050 PF00005 ABC transporter C1N55_RS15050 PF12857 TOBE-like domain C1N55_RS15055 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15060 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15070 PF01507 Phosphoadenosine phosphosulfate reductase family C1N55_RS15075 PF01747 ATP-sulfurylase C1N55_RS15075 PF14306 PUA-like domain C1N55_RS15095 PF08818 Domain of unknown function (DU1801) C1N55_RS15110 PF01458 Uncharacterized protein family (UPF0051) C1N55_RS15115 PF01592 NifU-like N terminal domain C1N55_RS15120 PF00266 Aminotransferase class-V C1N55_RS15125 PF01458 Uncharacterized protein family (UPF0051) C1N55_RS15130 PF00005 ABC transporter C1N55_RS15135 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C1N55_RS15135 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS15140 PF01645 Conserved region in glutamate synthase C1N55_RS15140 PF00310 Glutamine amidotransferases class-II C1N55_RS15140 PF01493 GXGXG motif C1N55_RS15140 PF04898 Glutamate synthase central domain C1N55_RS15145 PF03466 LysR substrate binding domain C1N55_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS15150 PF03180 NLPA lipoprotein C1N55_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15160 PF00005 ABC transporter C1N55_RS15160 PF09383 NIL domain C1N55_RS15165 PF00085 Thioredoxin C1N55_RS15170 PF01751 Toprim domain C1N55_RS15175 PF01597 Glycine cleavage H-protein C1N55_RS15180 PF03960 ArsC family C1N55_RS15185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS15185 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS15185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS15190 PF00108 Thiolase, N-terminal domain C1N55_RS15190 PF02803 Thiolase, C-terminal domain C1N55_RS15195 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS15195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1N55_RS15195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1N55_RS15200 PF00085 Thioredoxin C1N55_RS15205 PF01361 Tautomerase enzyme C1N55_RS15210 PF13419 Haloacid dehalogenase-like hydrolase C1N55_RS15220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C1N55_RS15220 PF01367 5'-3' exonuclease, C-terminal SAM fold C1N55_RS15230 PF03109 ABC1 family C1N55_RS15235 PF02566 OsmC-like protein C1N55_RS15240 PF00149 Calcineurin-like phosphoesterase C1N55_RS15245 PF00313 'Cold-shock' DNA-binding domain C1N55_RS15250 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS15250 PF00563 EAL domain C1N55_RS15250 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS15260 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS15265 PF01209 ubiE/COQ5 methyltransferase family C1N55_RS15275 PF00672 HAMP domain C1N55_RS15275 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS15280 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS15280 PF00072 Response regulator receiver domain C1N55_RS15285 PF00561 alpha/beta hydrolase fold C1N55_RS15295 PF00892 EamA-like transporter family C1N55_RS15300 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS15310 PF02743 Cache domain C1N55_RS15310 PF00672 HAMP domain C1N55_RS15310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS15325 PF00892 EamA-like transporter family C1N55_RS15330 PF00155 Aminotransferase class I and II C1N55_RS15330 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS15335 PF00171 Aldehyde dehydrogenase family C1N55_RS15355 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS15380 PF13276 HTH-like domain C1N55_RS15380 PF00665 Integrase core domain C1N55_RS15380 PF13333 Integrase core domain C1N55_RS15395 PF04647 Accessory gene regulator B C1N55_RS15410 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS15420 PF13787 Protein of unknown function with HXXEE motif C1N55_RS15430 PF01625 Peptide methionine sulfoxide reductase C1N55_RS15430 PF01641 SelR domain C1N55_RS15490 PF02557 D-alanyl-D-alanine carboxypeptidase C1N55_RS15495 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS15500 PF00072 Response regulator receiver domain C1N55_RS15500 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS15510 PF00893 Small Multidrug Resistance protein C1N55_RS15515 PF00893 Small Multidrug Resistance protein C1N55_RS15520 PF00893 Small Multidrug Resistance protein C1N55_RS15540 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS15545 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS15550 PF01047 MarR family C1N55_RS15560 PF04299 Putative FMN-binding domain C1N55_RS15565 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS15565 PF00155 Aminotransferase class I and II C1N55_RS15575 PF02447 GntP family permease C1N55_RS15580 PF02595 Glycerate kinase family C1N55_RS15585 PF13556 PucR C-terminal helix-turn-helix domain C1N55_RS15585 PF17853 GGDEF-like domain C1N55_RS15585 PF05651 Putative sugar diacid recognition C1N55_RS15590 PF07690 Major Facilitator Superfamily C1N55_RS15595 PF18011 C-terminal domain found in long catalases C1N55_RS15595 PF00199 Catalase C1N55_RS15595 PF06628 Catalase-related immune-responsive C1N55_RS15610 PF03600 Citrate transporter C1N55_RS15615 PF12431 Transcriptional regulator C1N55_RS15615 PF08279 HTH domain C1N55_RS15615 PF00072 Response regulator receiver domain C1N55_RS15620 PF00989 PAS fold C1N55_RS15620 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C1N55_RS15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS15620 PF17203 Single cache domain 3 C1N55_RS15625 PF00248 Aldo/keto reductase family C1N55_RS15630 PF08386 TAP-like protein C1N55_RS15630 PF00561 alpha/beta hydrolase fold C1N55_RS15650 PF07859 alpha/beta hydrolase fold C1N55_RS15660 PF00072 Response regulator receiver domain C1N55_RS15660 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS15665 PF00005 ABC transporter C1N55_RS15670 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15675 PF00497 Bacterial extracellular solute-binding proteins, family 3 C1N55_RS15680 PF00202 Aminotransferase class-III C1N55_RS15685 PF01081 KDPG and KHG aldolase C1N55_RS15690 PF00294 pfkB family carbohydrate kinase C1N55_RS15705 PF00107 Zinc-binding dehydrogenase C1N55_RS15705 PF08240 Alcohol dehydrogenase GroES-like domain C1N55_RS15710 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1N55_RS15715 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C1N55_RS15720 PF03480 Bacterial extracellular solute-binding protein, family 7 C1N55_RS15725 PF01842 ACT domain C1N55_RS15725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1N55_RS15725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1N55_RS15730 PF04962 KduI/IolB family C1N55_RS15735 PF09339 IclR helix-turn-helix domain C1N55_RS15735 PF01614 Bacterial transcriptional regulator C1N55_RS15740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS15740 PF13426 PAS domain C1N55_RS15740 PF08447 PAS fold C1N55_RS15745 PF00005 ABC transporter C1N55_RS15750 PF01032 FecCD transport family C1N55_RS15755 PF01032 FecCD transport family C1N55_RS15760 PF01497 Periplasmic binding protein C1N55_RS15780 PF01546 Peptidase family M20/M25/M40 C1N55_RS15780 PF07687 Peptidase dimerisation domain C1N55_RS15785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C1N55_RS15785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C1N55_RS15790 PF00171 Aldehyde dehydrogenase family C1N55_RS15795 PF05651 Putative sugar diacid recognition C1N55_RS15795 PF17853 GGDEF-like domain C1N55_RS15795 PF13556 PucR C-terminal helix-turn-helix domain C1N55_RS15805 PF00171 Aldehyde dehydrogenase family C1N55_RS15810 PF00202 Aminotransferase class-III C1N55_RS15815 PF00155 Aminotransferase class I and II C1N55_RS15815 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS15820 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1N55_RS15825 PF00171 Aldehyde dehydrogenase family C1N55_RS15830 PF00970 Oxidoreductase FAD-binding domain C1N55_RS15830 PF00111 2Fe-2S iron-sulfur cluster binding domain C1N55_RS15830 PF00175 Oxidoreductase NAD-binding domain C1N55_RS15845 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C1N55_RS15855 PF00158 Sigma-54 interaction domain C1N55_RS15860 PF00309 Sigma-54 factor, Activator interacting domain (AID) C1N55_RS15860 PF04963 Sigma-54 factor, core binding domain C1N55_RS15860 PF04552 Sigma-54, DNA binding domain C1N55_RS15865 PF02913 FAD linked oxidases, C-terminal domain C1N55_RS15865 PF01565 FAD binding domain C1N55_RS15875 PF00171 Aldehyde dehydrogenase family C1N55_RS15880 PF00465 Iron-containing alcohol dehydrogenase C1N55_RS15885 PF03480 Bacterial extracellular solute-binding protein, family 7 C1N55_RS15895 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C1N55_RS15895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C1N55_RS15900 PF01614 Bacterial transcriptional regulator C1N55_RS15900 PF09339 IclR helix-turn-helix domain C1N55_RS15915 PF04397 LytTr DNA-binding domain C1N55_RS15915 PF00072 Response regulator receiver domain C1N55_RS15920 PF07694 5TMR of 5TMR-LYT C1N55_RS15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS15920 PF06580 Histidine kinase C1N55_RS15925 PF00005 ABC transporter C1N55_RS15925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS15930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS15930 PF00005 ABC transporter C1N55_RS15935 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15940 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS15940 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS15945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS15950 PF07969 Amidohydrolase family C1N55_RS15955 PF07969 Amidohydrolase family C1N55_RS15995 PF00145 C-5 cytosine-specific DNA methylase C1N55_RS16035 PF00004 ATPase family associated with various cellular activities (AAA) C1N55_RS16035 PF07724 AAA domain (Cdc48 subfamily) C1N55_RS16035 PF17871 AAA lid domain C1N55_RS16035 PF10431 C-terminal, D2-small domain, of ClpB protein C1N55_RS16050 PF02796 Helix-turn-helix domain of resolvase C1N55_RS16050 PF00239 Resolvase, N terminal domain C1N55_RS16110 PF01668 SmpB protein C1N55_RS16115 PF00773 RNB domain C1N55_RS16115 PF08206 Ribonuclease B OB domain C1N55_RS16115 PF00575 S1 RNA binding domain C1N55_RS16115 PF17876 Cold shock domain C1N55_RS16120 PF12146 Serine aminopeptidase, S33 C1N55_RS16125 PF03840 Preprotein translocase SecG subunit C1N55_RS16130 PF01758 Sodium Bile acid symporter family C1N55_RS16135 PF00245 Alkaline phosphatase C1N55_RS16140 PF00005 ABC transporter C1N55_RS16145 PF01032 FecCD transport family C1N55_RS16165 PF00892 EamA-like transporter family C1N55_RS16170 PF01810 LysE type translocator C1N55_RS16175 PF03952 Enolase, N-terminal domain C1N55_RS16175 PF00113 Enolase, C-terminal TIM barrel domain C1N55_RS16180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C1N55_RS16180 PF01676 Metalloenzyme superfamily C1N55_RS16185 PF00121 Triosephosphate isomerase C1N55_RS16190 PF00162 Phosphoglycerate kinase C1N55_RS16195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C1N55_RS16195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C1N55_RS16200 PF04198 Putative sugar-binding domain C1N55_RS16210 PF07875 Coat F domain C1N55_RS16215 PF13683 Integrase core domain C1N55_RS16215 PF01610 Transposase C1N55_RS16225 PF00574 Clp protease C1N55_RS16230 PF00381 PTS HPr component phosphorylation site C1N55_RS16235 PF14527 WhiA LAGLIDADG-like domain C1N55_RS16235 PF10298 WhiA N-terminal LAGLIDADG-like domain C1N55_RS16235 PF02650 WhiA C-terminal HTH domain C1N55_RS16240 PF01933 Uncharacterised protein family UPF0052 C1N55_RS16245 PF03668 P-loop ATPase protein family C1N55_RS16250 PF00293 NUDIX domain C1N55_RS16255 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS16265 PF01502 Phosphoribosyl-AMP cyclohydrolase C1N55_RS16265 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C1N55_RS16270 PF00977 Histidine biosynthesis protein C1N55_RS16275 PF00117 Glutamine amidotransferase class-I C1N55_RS16280 PF00475 Imidazoleglycerol-phosphate dehydratase C1N55_RS16285 PF00815 Histidinol dehydrogenase C1N55_RS16290 PF01634 ATP phosphoribosyltransferase C1N55_RS16295 PF13393 Histidyl-tRNA synthetase C1N55_RS16305 PF14602 Hexapeptide repeat of succinyl-transferase C1N55_RS16310 PF13419 Haloacid dehalogenase-like hydrolase C1N55_RS16315 PF01790 Prolipoprotein diacylglyceryl transferase C1N55_RS16320 PF02603 HPr Serine kinase N terminus C1N55_RS16320 PF07475 HPr Serine kinase C-terminal domain C1N55_RS16325 PF01039 Carboxyl transferase domain C1N55_RS16330 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS16335 PF00682 HMGL-like C1N55_RS16340 PF00364 Biotin-requiring enzyme C1N55_RS16345 PF00289 Biotin carboxylase, N-terminal domain C1N55_RS16345 PF02785 Biotin carboxylase C-terminal domain C1N55_RS16345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C1N55_RS16350 PF00501 AMP-binding enzyme C1N55_RS16350 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS16355 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS16355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS16355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS16365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C1N55_RS16370 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C1N55_RS16370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS16375 PF02664 S-Ribosylhomocysteinase (LuxS) C1N55_RS16380 PF07676 WD40-like Beta Propeller Repeat C1N55_RS16380 PF00326 Prolyl oligopeptidase family C1N55_RS16385 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS16385 PF00501 AMP-binding enzyme C1N55_RS16390 PF02687 FtsX-like permease family C1N55_RS16395 PF00005 ABC transporter C1N55_RS16400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS16405 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS16405 PF00072 Response regulator receiver domain C1N55_RS16410 PF03099 Biotin/lipoate A/B protein ligase family C1N55_RS16410 PF10437 Bacterial lipoate protein ligase C-terminus C1N55_RS16420 PF01381 Helix-turn-helix C1N55_RS16435 PF01593 Flavin containing amine oxidoreductase C1N55_RS16440 PF00762 Ferrochelatase C1N55_RS16445 PF01208 Uroporphyrinogen decarboxylase (URO-D) C1N55_RS16450 PF03992 Antibiotic biosynthesis monooxygenase C1N55_RS16455 PF02423 Ornithine cyclodeaminase/mu-crystallin family C1N55_RS16460 PF00083 Sugar (and other) transporter C1N55_RS16475 PF00005 ABC transporter C1N55_RS16480 PF01230 HIT domain C1N55_RS16485 PF17099 Tryptophan transporter TrpP C1N55_RS16495 PF01047 MarR family C1N55_RS16515 PF05698 Bacterial trigger factor protein (TF) C-terminus C1N55_RS16520 PF03831 PhnA domain C1N55_RS16520 PF08274 PhnA Zinc-Ribbon C1N55_RS16525 PF02630 SCO1/SenC C1N55_RS16530 PF01966 HD domain C1N55_RS16540 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS16545 PF00890 FAD binding domain C1N55_RS16550 PF01842 ACT domain C1N55_RS16550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1N55_RS16550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1N55_RS16555 PF13419 Haloacid dehalogenase-like hydrolase C1N55_RS16560 PF11724 YvbH-like oligomerisation region C1N55_RS16560 PF08000 Bacterial PH domain C1N55_RS16570 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS16570 PF00072 Response regulator receiver domain C1N55_RS16575 PF04055 Radical SAM superfamily C1N55_RS16580 PF06133 Control of competence regulator ComK, YlbF/YmcA C1N55_RS16585 PF04286 Protein of unknown function (DUF445) C1N55_RS16595 PF07690 Major Facilitator Superfamily C1N55_RS16600 PF00005 ABC transporter C1N55_RS16600 PF00664 ABC transporter transmembrane region C1N55_RS16605 PF00005 ABC transporter C1N55_RS16605 PF00664 ABC transporter transmembrane region C1N55_RS16610 PF03471 Transporter associated domain C1N55_RS16610 PF00571 CBS domain C1N55_RS16610 PF01595 Cyclin M transmembrane N-terminal domain C1N55_RS16615 PF16916 Dimerisation domain of Zinc Transporter C1N55_RS16615 PF01545 Cation efflux family C1N55_RS16620 PF00072 Response regulator receiver domain C1N55_RS16620 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS16625 PF13185 GAF domain C1N55_RS16625 PF07730 Histidine kinase C1N55_RS16630 PF07729 FCD domain C1N55_RS16630 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS16635 PF02600 Disulfide bond formation protein DsbB C1N55_RS16640 PF00085 Thioredoxin C1N55_RS16645 PF00849 RNA pseudouridylate synthase C1N55_RS16645 PF01479 S4 domain C1N55_RS16650 PF00578 AhpC/TSA family C1N55_RS16655 PF02600 Disulfide bond formation protein DsbB C1N55_RS16660 PF13462 Thioredoxin C1N55_RS16675 PF00248 Aldo/keto reductase family C1N55_RS16680 PF00501 AMP-binding enzyme C1N55_RS16680 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS16690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS16695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS16700 PF00588 SpoU rRNA Methylase family C1N55_RS16705 PF08331 Domain of unknown function (DUF1730) C1N55_RS16720 PF02016 LD-carboxypeptidase N-terminal domain C1N55_RS16720 PF17676 LD-carboxypeptidase C-terminal domain C1N55_RS16725 PF00072 Response regulator receiver domain C1N55_RS16725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS16725 PF09308 LuxQ, periplasmic C1N55_RS16725 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS16730 PF03705 CheR methyltransferase, all-alpha domain C1N55_RS16730 PF01739 CheR methyltransferase, SAM binding domain C1N55_RS16735 PF13426 PAS domain C1N55_RS16735 PF07228 Stage II sporulation protein E (SpoIIE) C1N55_RS16740 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS16740 PF08448 PAS fold C1N55_RS16745 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS16745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS16745 PF00672 HAMP domain C1N55_RS16755 PF12419 SNF2 Helicase protein C1N55_RS16755 PF00271 Helicase conserved C-terminal domain C1N55_RS16755 PF00176 SNF2 family N-terminal domain C1N55_RS16760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C1N55_RS16785 PF00501 AMP-binding enzyme C1N55_RS16785 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS16790 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS16790 PF17932 Tetracyclin repressor-like, C-terminal domain C1N55_RS16795 PF13732 Domain of unknown function (DUF4162) C1N55_RS16795 PF00005 ABC transporter C1N55_RS16805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS16805 PF13426 PAS domain C1N55_RS16805 PF08447 PAS fold C1N55_RS16815 PF03323 Bacillus/Clostridium GerA spore germination protein C1N55_RS16820 PF03845 Spore germination protein C1N55_RS16825 PF13683 Integrase core domain C1N55_RS16825 PF01610 Transposase C1N55_RS16875 PF00144 Beta-lactamase C1N55_RS16890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C1N55_RS16915 PF14659 Phage integrase, N-terminal SAM-like domain C1N55_RS16915 PF00589 Phage integrase family C1N55_RS17025 PF18576 Helix-turn-helix domain C1N55_RS17025 PF14540 Nucleotidyltransferase-like C1N55_RS17030 PF11023 Zinc-ribbon containing domain C1N55_RS17035 PF01475 Ferric uptake regulator family C1N55_RS17040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1N55_RS17040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1N55_RS17045 PF00578 AhpC/TSA family C1N55_RS17050 PF00202 Aminotransferase class-III C1N55_RS17055 PF06081 Aromatic acid exporter family member 1 C1N55_RS17065 PF00005 ABC transporter C1N55_RS17070 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS17080 PF00291 Pyridoxal-phosphate dependent enzyme C1N55_RS17085 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS17085 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS17090 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS17095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS17100 PF00005 ABC transporter C1N55_RS17100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS17105 PF00005 ABC transporter C1N55_RS17105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS17110 PF00664 ABC transporter transmembrane region C1N55_RS17110 PF00005 ABC transporter C1N55_RS17115 PF04167 Protein of unknown function (DUF402) C1N55_RS17120 PF14815 NUDIX domain C1N55_RS17120 PF00730 HhH-GPD superfamily base excision DNA repair protein C1N55_RS17120 PF00633 Helix-hairpin-helix motif C1N55_RS17125 PF04307 LexA-binding, inner membrane-associated putative hydrolase C1N55_RS17130 PF14043 WVELL protein C1N55_RS17135 PF08838 Protein of unknown function (DUF1811) C1N55_RS17140 PF02631 RecX family C1N55_RS17145 PF01522 Polysaccharide deacetylase C1N55_RS17150 PF00885 6,7-dimethyl-8-ribityllumazine synthase C1N55_RS17155 PF00925 GTP cyclohydrolase II C1N55_RS17155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C1N55_RS17160 PF00677 Lumazine binding domain C1N55_RS17165 PF01938 TRAM domain C1N55_RS17165 PF05958 tRNA (Uracil-5-)-methyltransferase C1N55_RS17170 PF12679 ABC-2 family transporter protein C1N55_RS17175 PF00005 ABC transporter C1N55_RS17175 PF13732 Domain of unknown function (DUF4162) C1N55_RS17180 PF13396 Phospholipase_D-nuclease N-terminal C1N55_RS17190 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS17195 PF03435 Saccharopine dehydrogenase NADP binding domain C1N55_RS17195 PF16653 Saccharopine dehydrogenase C-terminal domain C1N55_RS17200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C1N55_RS17205 PF07690 Major Facilitator Superfamily C1N55_RS17215 PF05683 Fumarase C-terminus C1N55_RS17215 PF05681 Fumarate hydratase (Fumerase) C1N55_RS17230 PF03631 Virulence factor BrkB C1N55_RS17240 PF06569 Protein of unknown function (DUF1128) C1N55_RS17245 PF04227 Indigoidine synthase A like protein C1N55_RS17250 PF00294 pfkB family carbohydrate kinase C1N55_RS17255 PF00691 OmpA family C1N55_RS17255 PF13677 Membrane MotB of proton-channel complex MotA/MotB C1N55_RS17260 PF01618 MotA/TolQ/ExbB proton channel family C1N55_RS17265 PF00484 Carbonic anhydrase C1N55_RS17270 PF13302 Acetyltransferase (GNAT) domain C1N55_RS17285 PF00557 Metallopeptidase family M24 C1N55_RS17290 PF09515 Thiamine transporter protein (Thia_YuaJ) C1N55_RS17300 PF13476 AAA domain C1N55_RS17305 PF12320 Type 5 capsule protein repressor C-terminal domain C1N55_RS17305 PF00149 Calcineurin-like phosphoesterase C1N55_RS17310 PF02073 Thermophilic metalloprotease (M29) C1N55_RS17315 PF00271 Helicase conserved C-terminal domain C1N55_RS17315 PF00270 DEAD/DEAH box helicase C1N55_RS17320 PF01177 Asp/Glu/Hydantoin racemase C1N55_RS17330 PF02803 Thiolase, C-terminal domain C1N55_RS17330 PF00108 Thiolase, N-terminal domain C1N55_RS17335 PF00501 AMP-binding enzyme C1N55_RS17335 PF13193 AMP-binding enzyme C-terminal domain C1N55_RS17340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C1N55_RS17340 PF02770 Acyl-CoA dehydrogenase, middle domain C1N55_RS17340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C1N55_RS17345 PF00872 Transposase, Mutator family C1N55_RS17360 PF13409 Glutathione S-transferase, N-terminal domain C1N55_RS17380 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS17380 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C1N55_RS17385 PF00892 EamA-like transporter family C1N55_RS17390 PF03734 L,D-transpeptidase catalytic domain C1N55_RS17390 PF01476 LysM domain C1N55_RS17395 PF00753 Metallo-beta-lactamase superfamily C1N55_RS17405 PF00753 Metallo-beta-lactamase superfamily C1N55_RS17405 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C1N55_RS17405 PF17770 Ribonuclease J C-terminal domain C1N55_RS17410 PF06628 Catalase-related immune-responsive C1N55_RS17410 PF00199 Catalase C1N55_RS17415 PF04293 SpoVR like protein C1N55_RS17420 PF04285 Protein of unknown function (DUF444) C1N55_RS17425 PF08298 PrkA AAA domain C1N55_RS17425 PF06798 PrkA serine protein kinase C-terminal domain C1N55_RS17435 PF12652 CotJB protein C1N55_RS17440 PF05067 Manganese containing catalase C1N55_RS17445 PF00892 EamA-like transporter family C1N55_RS17450 PF00348 Polyprenyl synthetase C1N55_RS17475 PF00563 EAL domain C1N55_RS17475 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS17475 PF00498 FHA domain C1N55_RS17495 PF02872 5'-nucleotidase, C-terminal domain C1N55_RS17495 PF00149 Calcineurin-like phosphoesterase C1N55_RS17500 PF00269 Small, acid-soluble spore proteins, alpha/beta type C1N55_RS17505 PF00701 Dihydrodipicolinate synthetase family C1N55_RS17510 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS17510 PF00155 Aminotransferase class I and II C1N55_RS17515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C1N55_RS17515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C1N55_RS17530 PF00180 Isocitrate/isopropylmalate dehydrogenase C1N55_RS17550 PF04308 Ribonuclease H-like C1N55_RS17555 PF02073 Thermophilic metalloprotease (M29) C1N55_RS17560 PF00375 Sodium:dicarboxylate symporter family C1N55_RS17565 PF07308 Protein of unknown function (DUF1456) C1N55_RS17570 PF01037 Lrp/AsnC ligand binding domain C1N55_RS17575 PF00155 Aminotransferase class I and II C1N55_RS17580 PF01235 Sodium:alanine symporter family C1N55_RS17590 PF00950 ABC 3 transport family C1N55_RS17595 PF00950 ABC 3 transport family C1N55_RS17600 PF00005 ABC transporter C1N55_RS17605 PF01297 Zinc-uptake complex component A periplasmic C1N55_RS17610 PF17202 Single cache domain 3 C1N55_RS17610 PF00672 HAMP domain C1N55_RS17610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS17620 PF09924 Uncharacterised conserved protein (DUF2156) C1N55_RS17620 PF03706 Lysylphosphatidylglycerol synthase TM region C1N55_RS17625 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS17625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS17625 PF00672 HAMP domain C1N55_RS17630 PF00672 HAMP domain C1N55_RS17630 PF05227 CHASE3 domain C1N55_RS17630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS17645 PF00884 Sulfatase C1N55_RS17650 PF01476 LysM domain C1N55_RS17650 PF06725 3D domain C1N55_RS17655 PF13538 UvrD-like helicase C-terminal domain C1N55_RS17660 PF00877 NlpC/P60 family C1N55_RS17670 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS17670 PF00563 EAL domain C1N55_RS17670 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS17680 PF12833 Helix-turn-helix domain C1N55_RS17690 PF01207 Dihydrouridine synthase (Dus) C1N55_RS17700 PF01717 Cobalamin-independent synthase, Catalytic domain C1N55_RS17705 PF07690 Major Facilitator Superfamily C1N55_RS17715 PF01938 TRAM domain C1N55_RS17715 PF05958 tRNA (Uracil-5-)-methyltransferase C1N55_RS17720 PF00781 Diacylglycerol kinase catalytic domain C1N55_RS17730 PF02934 GatB/GatE catalytic domain C1N55_RS17730 PF02637 GatB domain C1N55_RS17735 PF01425 Amidase C1N55_RS17740 PF02686 Glu-tRNAGln amidotransferase C subunit C1N55_RS17745 PF07537 CamS sex pheromone cAM373 precursor C1N55_RS17750 PF01653 NAD-dependent DNA ligase adenylation domain C1N55_RS17750 PF12826 Helix-hairpin-helix motif C1N55_RS17750 PF00533 BRCA1 C Terminus (BRCT) domain C1N55_RS17750 PF03120 NAD-dependent DNA ligase OB-fold domain C1N55_RS17750 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C1N55_RS17755 PF13361 UvrD-like helicase C-terminal domain C1N55_RS17755 PF00580 UvrD/REP helicase N-terminal domain C1N55_RS17760 PF01884 PcrB family C1N55_RS17765 PF01371 Trp repressor protein C1N55_RS17770 PF11258 Protein of unknown function (DUF3048) N-terminal domain C1N55_RS17770 PF17479 Protein of unknown function (DUF3048) C-terminal domain C1N55_RS17775 PF01979 Amidohydrolase family C1N55_RS17775 PF13382 Adenine deaminase C-terminal domain C1N55_RS17785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C1N55_RS17785 PF02843 Phosphoribosylglycinamide synthetase, C domain C1N55_RS17785 PF02844 Phosphoribosylglycinamide synthetase, N domain C1N55_RS17790 PF01808 AICARFT/IMPCHase bienzyme C1N55_RS17790 PF02142 MGS-like domain C1N55_RS17795 PF00551 Formyl transferase C1N55_RS17800 PF00586 AIR synthase related protein, N-terminal domain C1N55_RS17800 PF02769 AIR synthase related protein, C-terminal domain C1N55_RS17805 PF00156 Phosphoribosyl transferase domain C1N55_RS17810 PF02769 AIR synthase related protein, C-terminal domain C1N55_RS17810 PF00586 AIR synthase related protein, N-terminal domain C1N55_RS17810 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C1N55_RS17820 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C1N55_RS17825 PF01259 SAICAR synthetase C1N55_RS17830 PF00206 Lyase C1N55_RS17830 PF10397 Adenylosuccinate lyase C-terminus C1N55_RS17835 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain C1N55_RS17835 PF02222 ATP-grasp domain C1N55_RS17840 PF00731 AIR carboxylase C1N55_RS17845 PF14044 NETI protein C1N55_RS17850 PF00072 Response regulator receiver domain C1N55_RS17850 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS17855 PF00672 HAMP domain C1N55_RS17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS17855 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS17880 PF00924 Mechanosensitive ion channel C1N55_RS17930 PF00293 NUDIX domain C1N55_RS17955 PF00860 Permease family C1N55_RS17970 PF09323 Domain of unknown function (DUF1980) C1N55_RS17975 PF03773 Predicted permease C1N55_RS17980 PF03062 MBOAT, membrane-bound O-acyltransferase family C1N55_RS17990 PF00958 GMP synthase C terminal domain C1N55_RS17990 PF00117 Glutamine amidotransferase class-I C1N55_RS17990 PF02540 NAD synthase C1N55_RS17995 PF11992 Domain of unknown function (DUF3488) C1N55_RS17995 PF13559 Domain of unknown function (DUF4129) C1N55_RS17995 PF01841 Transglutaminase-like superfamily C1N55_RS18000 PF01882 Protein of unknown function DUF58 C1N55_RS18005 PF07726 ATPase family associated with various cellular activities (AAA) C1N55_RS18005 PF17863 AAA lid domain C1N55_RS18015 PF02540 NAD synthase C1N55_RS18020 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C1N55_RS18020 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain C1N55_RS18020 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C1N55_RS18025 PF00005 ABC transporter C1N55_RS18030 PF03649 Uncharacterised protein family (UPF0014) C1N55_RS18035 PF01619 Proline dehydrogenase C1N55_RS18040 PF00072 Response regulator receiver domain C1N55_RS18040 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS18045 PF07730 Histidine kinase C1N55_RS18050 PF00487 Fatty acid desaturase C1N55_RS18055 PF02965 Vitamin B12 dependent methionine synthase, activation domain C1N55_RS18055 PF02574 Homocysteine S-methyltransferase C1N55_RS18055 PF00809 Pterin binding enzyme C1N55_RS18055 PF02310 B12 binding domain C1N55_RS18055 PF02607 B12 binding domain C1N55_RS18060 PF02219 Methylenetetrahydrofolate reductase C1N55_RS18060 PF02574 Homocysteine S-methyltransferase C1N55_RS18065 PF01593 Flavin containing amine oxidoreductase C1N55_RS18075 PF03466 LysR substrate binding domain C1N55_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C1N55_RS18080 PF12146 Serine aminopeptidase, S33 C1N55_RS18090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS18090 PF12729 Four helix bundle sensory module for signal transduction C1N55_RS18090 PF00672 HAMP domain C1N55_RS18100 PF04241 Protein of unknown function (DUF423) C1N55_RS18115 PF02735 Ku70/Ku80 beta-barrel domain C1N55_RS18120 PF01068 ATP dependent DNA ligase domain C1N55_RS18135 PF16916 Dimerisation domain of Zinc Transporter C1N55_RS18135 PF01545 Cation efflux family C1N55_RS18140 PF01022 Bacterial regulatory protein, arsR family C1N55_RS18150 PF00704 Glycosyl hydrolases family 18 C1N55_RS18150 PF01476 LysM domain C1N55_RS18155 PF10388 EAL-domain associated signalling protein domain C1N55_RS18155 PF00563 EAL domain C1N55_RS18160 PF07690 Major Facilitator Superfamily C1N55_RS18165 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS18165 PF17922 Tetracyclin repressor-like, C-terminal domain C1N55_RS18180 PF17202 Single cache domain 3 C1N55_RS18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS18180 PF00672 HAMP domain C1N55_RS18200 PF07690 Major Facilitator Superfamily C1N55_RS18205 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS18210 PF08892 YqcI/YcgG family C1N55_RS18215 PF12704 MacB-like periplasmic core domain C1N55_RS18215 PF02687 FtsX-like permease family C1N55_RS18215 PF00005 ABC transporter C1N55_RS18225 PF00535 Glycosyl transferase family 2 C1N55_RS18225 PF01501 Glycosyl transferase family 8 C1N55_RS18230 PF00535 Glycosyl transferase family 2 C1N55_RS18230 PF01501 Glycosyl transferase family 8 C1N55_RS18235 PF00535 Glycosyl transferase family 2 C1N55_RS18250 PF00118 TCP-1/cpn60 chaperonin family C1N55_RS18255 PF00166 Chaperonin 10 Kd subunit C1N55_RS18260 PF02517 CPBP intramembrane metalloprotease C1N55_RS18265 PF00902 Sec-independent protein translocase protein (TatC) C1N55_RS18270 PF02416 mttA/Hcf106 family C1N55_RS18275 PF06971 Putative DNA-binding protein N-terminus C1N55_RS18275 PF02629 CoA binding domain C1N55_RS18280 PF12848 ABC transporter C1N55_RS18280 PF16326 ABC transporter C-terminal domain C1N55_RS18280 PF00005 ABC transporter C1N55_RS18285 PF00814 Glycoprotease family C1N55_RS18290 PF00583 Acetyltransferase (GNAT) family C1N55_RS18295 PF00814 Glycoprotease family C1N55_RS18300 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C1N55_RS18370 PF10263 SprT-like family C1N55_RS18370 PF17283 SprT-like zinc ribbon domain C1N55_RS18375 PF09371 Tex-like protein N-terminal domain C1N55_RS18375 PF00575 S1 RNA binding domain C1N55_RS18375 PF17674 HHH domain C1N55_RS18375 PF16921 Tex protein YqgF-like domain C1N55_RS18380 PF04539 Sigma-70 region 3 C1N55_RS18380 PF04542 Sigma-70 region 2 C1N55_RS18380 PF04545 Sigma-70, region 4 C1N55_RS18385 PF13581 Histidine kinase-like ATPase domain C1N55_RS18390 PF01740 STAS domain C1N55_RS18395 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain C1N55_RS18395 PF07228 Stage II sporulation protein E (SpoIIE) C1N55_RS18400 PF13581 Histidine kinase-like ATPase domain C1N55_RS18405 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C1N55_RS18415 PF00842 Alanine racemase, C-terminal domain C1N55_RS18415 PF01168 Alanine racemase, N-terminal domain C1N55_RS18425 PF01648 4'-phosphopantetheinyl transferase superfamily C1N55_RS18430 PF01694 Rhomboid family C1N55_RS18435 PF03703 Bacterial PH domain C1N55_RS18440 PF03703 Bacterial PH domain C1N55_RS18445 PF00270 DEAD/DEAH box helicase C1N55_RS18445 PF00271 Helicase conserved C-terminal domain C1N55_RS18450 PF08245 Mur ligase middle domain C1N55_RS18450 PF02875 Mur ligase family, glutamate ligase domain C1N55_RS18450 PF01225 Mur ligase family, catalytic domain C1N55_RS18455 PF01820 D-ala D-ala ligase N-terminus C1N55_RS18455 PF07478 D-ala D-ala ligase C-terminus C1N55_RS18465 PF01098 Cell cycle protein C1N55_RS18475 PF13396 Phospholipase_D-nuclease N-terminal C1N55_RS18475 PF13091 PLD-like domain C1N55_RS18480 PF02557 D-alanyl-D-alanine carboxypeptidase C1N55_RS18485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C1N55_RS18490 PF02096 60Kd inner membrane protein C1N55_RS18495 PF12833 Helix-turn-helix domain C1N55_RS18500 PF00072 Response regulator receiver domain C1N55_RS18500 PF04397 LytTr DNA-binding domain C1N55_RS18505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C1N55_RS18505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C1N55_RS18510 PF00884 Sulfatase C1N55_RS18530 PF13509 S1 domain C1N55_RS18530 PF17783 CvfB-like winged helix domain C1N55_RS18535 PF01325 Iron dependent repressor, N-terminal DNA binding domain C1N55_RS18535 PF02742 Iron dependent repressor, metal binding and dimerisation domain C1N55_RS18545 PF03372 Endonuclease/Exonuclease/phosphatase family C1N55_RS18550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C1N55_RS18550 PF01565 FAD binding domain C1N55_RS18555 PF01638 HxlR-like helix-turn-helix C1N55_RS18565 PF02525 Flavodoxin-like fold C1N55_RS18570 PF01323 DSBA-like thioredoxin domain C1N55_RS18575 PF00355 Rieske [2Fe-2S] domain C1N55_RS18575 PF01266 FAD dependent oxidoreductase C1N55_RS18580 PF01368 DHH family C1N55_RS18580 PF02833 DHHA2 domain C1N55_RS18585 PF01380 SIS domain C1N55_RS18585 PF01418 Helix-turn-helix domain, rpiR family C1N55_RS18590 PF07690 Major Facilitator Superfamily C1N55_RS18595 PF00291 Pyridoxal-phosphate dependent enzyme C1N55_RS18600 PF00288 GHMP kinases N terminal domain C1N55_RS18600 PF08544 GHMP kinases C terminal C1N55_RS18605 PF13460 NAD(P)H-binding C1N55_RS18610 PF02535 ZIP Zinc transporter C1N55_RS18615 PF01569 PAP2 superfamily C1N55_RS18620 PF03992 Antibiotic biosynthesis monooxygenase C1N55_RS18625 PF01497 Periplasmic binding protein C1N55_RS18630 PF00005 ABC transporter C1N55_RS18635 PF01032 FecCD transport family C1N55_RS18640 PF01032 FecCD transport family C1N55_RS18650 PF00854 POT family C1N55_RS18655 PF01926 50S ribosome-binding GTPase C1N55_RS18655 PF16360 GTP-binding GTPase Middle Region C1N55_RS18655 PF13167 GTP-binding GTPase N-terminal C1N55_RS18660 PF00474 Sodium:solute symporter family C1N55_RS18670 PF01865 Protein of unknown function DUF47 C1N55_RS18675 PF01384 Phosphate transporter family C1N55_RS18690 PF01594 AI-2E family transporter C1N55_RS18700 PF01709 Transcriptional regulator C1N55_RS18705 PF04228 Putative neutral zinc metallopeptidase C1N55_RS18710 PF01451 Low molecular weight phosphotyrosine protein phosphatase C1N55_RS18720 PF01553 Acyltransferase C1N55_RS18725 PF08241 Methyltransferase domain C1N55_RS18730 PF07690 Major Facilitator Superfamily C1N55_RS18740 PF12833 Helix-turn-helix domain C1N55_RS18740 PF06445 GyrI-like small molecule binding domain C1N55_RS18745 PF00072 Response regulator receiver domain C1N55_RS18745 PF04397 LytTr DNA-binding domain C1N55_RS18750 PF00005 ABC transporter C1N55_RS18765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C1N55_RS18770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C1N55_RS18775 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS18780 PF00571 CBS domain C1N55_RS18780 PF00005 ABC transporter C1N55_RS18790 PF07739 TipAS antibiotic-recognition domain C1N55_RS18790 PF13411 MerR HTH family regulatory protein C1N55_RS18800 PF00195 Chalcone and stilbene synthases, N-terminal domain C1N55_RS18800 PF02797 Chalcone and stilbene synthases, C-terminal domain C1N55_RS18805 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family C1N55_RS18810 PF07849 Protein of unknown function (DUF1641) C1N55_RS18815 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS18820 PF07690 Major Facilitator Superfamily C1N55_RS18825 PF07690 Major Facilitator Superfamily C1N55_RS18830 PF09335 SNARE associated Golgi protein C1N55_RS18835 PF03193 RsgA GTPase C1N55_RS18840 PF00005 ABC transporter C1N55_RS18840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS18845 PF00005 ABC transporter C1N55_RS18845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS18850 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS18850 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS18855 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS18860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS18865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS18865 PF00005 ABC transporter C1N55_RS18870 PF00005 ABC transporter C1N55_RS18870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C1N55_RS18875 PF12911 N-terminal TM domain of oligopeptide transport permease C C1N55_RS18875 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS18880 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS18885 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C1N55_RS18900 PF01925 Sulfite exporter TauE/SafE C1N55_RS18915 PF17151 Periplasmic sensor domain C1N55_RS18915 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS18920 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS18920 PF10442 FIST C domain C1N55_RS18920 PF08495 FIST N domain C1N55_RS18920 PF00563 EAL domain C1N55_RS18930 PF00005 ABC transporter C1N55_RS18930 PF12848 ABC transporter C1N55_RS18950 PF12867 DinB superfamily C1N55_RS18965 PF00067 Cytochrome P450 C1N55_RS18975 PF02028 BCCT, betaine/carnitine/choline family transporter C1N55_RS18980 PF14139 YpzG-like protein C1N55_RS18985 PF08827 Domain of unknown function (DUF1805) C1N55_RS19005 PF10942 Protein of unknown function (DUF2619) C1N55_RS19010 PF01544 CorA-like Mg2+ transporter protein C1N55_RS19015 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS19020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C1N55_RS19025 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS19030 PF00005 ABC transporter C1N55_RS19030 PF00571 CBS domain C1N55_RS19035 PF10026 Predicted Zn-dependent protease (DUF2268) C1N55_RS19045 PF01022 Bacterial regulatory protein, arsR family C1N55_RS19050 PF08327 Activator of Hsp90 ATPase homolog 1-like protein C1N55_RS19060 PF16347 Domain of unknown function (DUF4976) C1N55_RS19060 PF00884 Sulfatase C1N55_RS19065 PF12867 DinB superfamily C1N55_RS19070 PF07690 Major Facilitator Superfamily C1N55_RS19075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS19075 PF00672 HAMP domain C1N55_RS19075 PF02743 Cache domain C1N55_RS19080 PF01758 Sodium Bile acid symporter family C1N55_RS19090 PF00268 Ribonucleotide reductase, small chain C1N55_RS19095 PF02867 Ribonucleotide reductase, barrel domain C1N55_RS19095 PF00317 Ribonucleotide reductase, all-alpha domain C1N55_RS19095 PF08343 Ribonucleotide reductase N-terminal C1N55_RS19100 PF07972 NrdI Flavodoxin like C1N55_RS19105 PF00462 Glutaredoxin C1N55_RS19120 PF01810 LysE type translocator C1N55_RS19125 PF00392 Bacterial regulatory proteins, gntR family C1N55_RS19125 PF00155 Aminotransferase class I and II C1N55_RS19130 PF00072 Response regulator receiver domain C1N55_RS19130 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS19135 PF00378 Enoyl-CoA hydratase/isomerase C1N55_RS19135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C1N55_RS19135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C1N55_RS19140 PF00293 NUDIX domain C1N55_RS19140 PF09297 NADH pyrophosphatase zinc ribbon domain C1N55_RS19155 PF00133 tRNA synthetases class I (I, L, M and V) C1N55_RS19155 PF08264 Anticodon-binding domain of tRNA C1N55_RS19160 PF00561 alpha/beta hydrolase fold C1N55_RS19165 PF03575 Peptidase family S51 C1N55_RS19185 PF07730 Histidine kinase C1N55_RS19185 PF00672 HAMP domain C1N55_RS19185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS19190 PF00072 Response regulator receiver domain C1N55_RS19190 PF00196 Bacterial regulatory proteins, luxR family C1N55_RS19195 PF03061 Thioesterase superfamily C1N55_RS19205 PF08267 Cobalamin-independent synthase, N-terminal domain C1N55_RS19205 PF01717 Cobalamin-independent synthase, Catalytic domain C1N55_RS19215 PF07690 Major Facilitator Superfamily C1N55_RS19220 PF08818 Domain of unknown function (DU1801) C1N55_RS19225 PF00689 Cation transporting ATPase, C-terminus C1N55_RS19225 PF00690 Cation transporter/ATPase, N-terminus C1N55_RS19230 PF02659 Putative manganese efflux pump C1N55_RS19240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS19250 PF01380 SIS domain C1N55_RS19255 PF01965 DJ-1/PfpI family C1N55_RS19260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C1N55_RS19260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C1N55_RS19260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C1N55_RS19260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C1N55_RS19265 PF07949 YbbR-like protein C1N55_RS19270 PF02457 DisA bacterial checkpoint controller nucleotide-binding C1N55_RS19275 PF13490 Putative zinc-finger C1N55_RS19280 PF04542 Sigma-70 region 2 C1N55_RS19280 PF08281 Sigma-70, region 4 C1N55_RS19285 PF00491 Arginase family C1N55_RS19335 PF14089 KinB-signalling pathway activation in sporulation C1N55_RS19340 PF17898 Spore germination GerD central core domain C1N55_RS19345 PF10609 NUBPL iron-transfer P-loop NTPase C1N55_RS19350 PF03009 Glycerophosphoryl diester phosphodiesterase family C1N55_RS19355 PF13416 Bacterial extracellular solute-binding protein C1N55_RS19365 PF00528 Binding-protein-dependent transport system inner membrane component C1N55_RS19370 PF00005 ABC transporter C1N55_RS19370 PF03459 TOBE domain C1N55_RS19370 PF17912 MalK OB fold domain C1N55_RS19375 PF01520 N-acetylmuramoyl-L-alanine amidase C1N55_RS19380 PF00664 ABC transporter transmembrane region C1N55_RS19380 PF00005 ABC transporter C1N55_RS19385 PF00005 ABC transporter C1N55_RS19385 PF00664 ABC transporter transmembrane region C1N55_RS19395 PF00583 Acetyltransferase (GNAT) family C1N55_RS19395 PF00795 Carbon-nitrogen hydrolase C1N55_RS19400 PF00583 Acetyltransferase (GNAT) family C1N55_RS19405 PF04239 Protein of unknown function (DUF421) C1N55_RS19415 PF00082 Subtilase family C1N55_RS19425 PF02581 Thiamine monophosphate synthase C1N55_RS19430 PF08543 Phosphomethylpyrimidine kinase C1N55_RS19435 PF02110 Hydroxyethylthiazole kinase family C1N55_RS19440 PF00380 Ribosomal protein S9/S16 C1N55_RS19445 PF00572 Ribosomal protein L13 C1N55_RS19450 PF01416 tRNA pseudouridine synthase C1N55_RS19455 PF02361 Cobalt transport protein C1N55_RS19460 PF00005 ABC transporter C1N55_RS19465 PF00005 ABC transporter C1N55_RS19470 PF01196 Ribosomal protein L17 C1N55_RS19475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C1N55_RS19475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C1N55_RS19475 PF01000 RNA polymerase Rpb3/RpoA insert domain C1N55_RS19480 PF00411 Ribosomal protein S11 C1N55_RS19485 PF00416 Ribosomal protein S13/S18 C1N55_RS19490 PF00444 Ribosomal protein L36 C1N55_RS19495 PF01176 Translation initiation factor 1A / IF-1 C1N55_RS19500 PF05191 Adenylate kinase, active site lid C1N55_RS19505 PF00344 SecY translocase C1N55_RS19510 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C1N55_RS19515 PF00327 Ribosomal protein L30p/L7e C1N55_RS19520 PF00333 Ribosomal protein S5, N-terminal domain C1N55_RS19520 PF03719 Ribosomal protein S5, C-terminal domain C1N55_RS19525 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C1N55_RS19530 PF00347 Ribosomal protein L6 C1N55_RS19535 PF00410 Ribosomal protein S8 C1N55_RS19540 PF00253 Ribosomal protein S14p/S29e C1N55_RS19545 PF00281 Ribosomal protein L5 C1N55_RS19545 PF00673 ribosomal L5P family C-terminus C1N55_RS19550 PF00467 KOW motif C1N55_RS19550 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C1N55_RS19555 PF00238 Ribosomal protein L14p/L23e C1N55_RS19560 PF00366 Ribosomal protein S17 C1N55_RS19565 PF00831 Ribosomal L29 protein C1N55_RS19570 PF00252 Ribosomal protein L16p/L10e C1N55_RS19575 PF07650 KH domain C1N55_RS19575 PF00189 Ribosomal protein S3, C-terminal domain C1N55_RS19580 PF00237 Ribosomal protein L22p/L17e C1N55_RS19585 PF00203 Ribosomal protein S19 C1N55_RS19590 PF00181 Ribosomal Proteins L2, RNA binding domain C1N55_RS19590 PF03947 Ribosomal Proteins L2, C-terminal domain C1N55_RS19595 PF00276 Ribosomal protein L23 C1N55_RS19600 PF00573 Ribosomal protein L4/L1 family C1N55_RS19605 PF00297 Ribosomal protein L3 C1N55_RS19610 PF00338 Ribosomal protein S10p/S20e C1N55_RS19615 PF02687 FtsX-like permease family C1N55_RS19620 PF00005 ABC transporter C1N55_RS19625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS19630 PF00072 Response regulator receiver domain C1N55_RS19630 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS19635 PF03143 Elongation factor Tu C-terminal domain C1N55_RS19635 PF03144 Elongation factor Tu domain 2 C1N55_RS19635 PF00009 Elongation factor Tu GTP binding domain C1N55_RS19640 PF14492 Elongation Factor G, domain II C1N55_RS19640 PF00679 Elongation factor G C-terminus C1N55_RS19640 PF03764 Elongation factor G, domain IV C1N55_RS19640 PF00009 Elongation factor Tu GTP binding domain C1N55_RS19640 PF03144 Elongation factor Tu domain 2 C1N55_RS19645 PF00177 Ribosomal protein S7p/S5e C1N55_RS19650 PF00164 Ribosomal protein S12/S23 C1N55_RS19655 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C1N55_RS19660 PF05000 RNA polymerase Rpb1, domain 4 C1N55_RS19660 PF04998 RNA polymerase Rpb1, domain 5 C1N55_RS19660 PF00623 RNA polymerase Rpb1, domain 2 C1N55_RS19660 PF04997 RNA polymerase Rpb1, domain 1 C1N55_RS19660 PF04983 RNA polymerase Rpb1, domain 3 C1N55_RS19665 PF10385 RNA polymerase beta subunit external 1 domain C1N55_RS19665 PF04565 RNA polymerase Rpb2, domain 3 C1N55_RS19665 PF04560 RNA polymerase Rpb2, domain 7 C1N55_RS19665 PF04561 RNA polymerase Rpb2, domain 2 C1N55_RS19665 PF00562 RNA polymerase Rpb2, domain 6 C1N55_RS19665 PF04563 RNA polymerase beta subunit C1N55_RS19670 PF05175 Methyltransferase small domain C1N55_RS19675 PF16320 Ribosomal protein L7/L12 dimerisation domain C1N55_RS19675 PF00542 Ribosomal protein L7/L12 C-terminal domain C1N55_RS19680 PF00466 Ribosomal protein L10 C1N55_RS19685 PF00687 Ribosomal protein L1p/L10e family C1N55_RS19690 PF03946 Ribosomal protein L11, N-terminal domain C1N55_RS19690 PF00298 Ribosomal protein L11, RNA binding domain C1N55_RS19695 PF02357 Transcription termination factor nusG C1N55_RS19695 PF00467 KOW motif C1N55_RS19700 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C1N55_RS19705 PF00471 Ribosomal protein L33 C1N55_RS19710 PF04542 Sigma-70 region 2 C1N55_RS19710 PF08281 Sigma-70, region 4 C1N55_RS19715 PF05991 YacP-like NYN domain C1N55_RS19720 PF00588 SpoU rRNA Methylase family C1N55_RS19720 PF08032 RNA 2'-O ribose methyltransferase substrate binding C1N55_RS19725 PF00636 Ribonuclease III domain C1N55_RS19730 PF01406 tRNA synthetases class I (C) catalytic domain C1N55_RS19730 PF09190 DALR domain C1N55_RS19735 PF00749 tRNA synthetases class I (E and Q), catalytic domain C1N55_RS19740 PF02542 YgbB family C1N55_RS19745 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C1N55_RS19755 PF18073 Rubredoxin metal binding domain C1N55_RS19760 PF17871 AAA lid domain C1N55_RS19760 PF07724 AAA domain (Cdc48 subfamily) C1N55_RS19760 PF10431 C-terminal, D2-small domain, of ClpB protein C1N55_RS19760 PF00004 ATPase family associated with various cellular activities (AAA) C1N55_RS19760 PF02861 Clp amino terminal domain, pathogenicity island component C1N55_RS19765 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C1N55_RS19775 PF17727 CtsR C-terminal dimerization domain C1N55_RS19775 PF05848 CtsR N-terminal HTH domain C1N55_RS19790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS19795 PF03061 Thioesterase superfamily C1N55_RS19800 PF00171 Aldehyde dehydrogenase family C1N55_RS19815 PF00171 Aldehyde dehydrogenase family C1N55_RS19820 PF01479 S4 domain C1N55_RS19820 PF00849 RNA pseudouridylate synthase C1N55_RS19825 PF00005 ABC transporter C1N55_RS19830 PF12399 Branched-chain amino acid ATP-binding cassette transporter C1N55_RS19830 PF00005 ABC transporter C1N55_RS19835 PF11862 Domain of unknown function (DUF3382) C1N55_RS19835 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS19840 PF02653 Branched-chain amino acid transport system / permease component C1N55_RS19845 PF13458 Periplasmic binding protein C1N55_RS19860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS19860 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS19865 PF06146 Phosphate-starvation-inducible E C1N55_RS19875 PF01546 Peptidase family M20/M25/M40 C1N55_RS19875 PF07687 Peptidase dimerisation domain C1N55_RS19885 PF02416 mttA/Hcf106 family C1N55_RS19890 PF00902 Sec-independent protein translocase protein (TatC) C1N55_RS19895 PF13520 Amino acid permease C1N55_RS19900 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS19905 PF00873 AcrB/AcrD/AcrF family C1N55_RS19915 PF01476 LysM domain C1N55_RS19915 PF00704 Glycosyl hydrolases family 18 C1N55_RS19920 PF05231 MASE1 C1N55_RS19920 PF08447 PAS fold C1N55_RS19920 PF00563 EAL domain C1N55_RS19920 PF08448 PAS fold C1N55_RS19920 PF13426 PAS domain C1N55_RS19920 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS19925 PF00246 Zinc carboxypeptidase C1N55_RS19925 PF01476 LysM domain C1N55_RS19935 PF08141 Small acid-soluble spore protein H family C1N55_RS19945 PF10127 RNA repair pathway DNA polymerase beta family C1N55_RS19950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C1N55_RS19955 PF00563 EAL domain C1N55_RS19955 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS19955 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS19965 PF00082 Subtilase family C1N55_RS19965 PF05922 Peptidase inhibitor I9 C1N55_RS19975 PF13508 Acetyltransferase (GNAT) domain C1N55_RS20005 PF01757 Acyltransferase family C1N55_RS20015 PF00293 NUDIX domain C1N55_RS20025 PF00815 Histidinol dehydrogenase C1N55_RS20030 PF00356 Bacterial regulatory proteins, lacI family C1N55_RS20035 PF00750 tRNA synthetases class I (R) C1N55_RS20035 PF03485 Arginyl tRNA synthetase N terminal domain C1N55_RS20035 PF05746 DALR anticodon binding domain C1N55_RS20070 PF00990 Diguanylate cyclase, GGDEF domain C1N55_RS20070 PF00563 EAL domain C1N55_RS20070 PF03707 Bacterial signalling protein N terminal repeat C1N55_RS20075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C1N55_RS20085 PF00440 Bacterial regulatory proteins, tetR family C1N55_RS20090 PF03851 UV-endonuclease UvdE C1N55_RS20095 PF02627 Carboxymuconolactone decarboxylase family C1N55_RS20100 PF11132 Transcriptional regulator protein (SplA) C1N55_RS20110 PF00578 AhpC/TSA family C1N55_RS20115 PF07992 Pyridine nucleotide-disulphide oxidoreductase C1N55_RS20115 PF13192 Thioredoxin domain C1N55_RS20120 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C1N55_RS20120 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C1N55_RS20120 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C1N55_RS20125 PF00551 Formyl transferase C1N55_RS20125 PF02911 Formyl transferase, C-terminal domain C1N55_RS20125 PF01370 NAD dependent epimerase/dehydratase family C1N55_RS20140 PF00534 Glycosyl transferases group 1 C1N55_RS20150 PF16363 GDP-mannose 4,6 dehydratase C1N55_RS20160 PF06628 Catalase-related immune-responsive C1N55_RS20160 PF00199 Catalase C1N55_RS20170 PF01738 Dienelactone hydrolase family C1N55_RS20180 PF12833 Helix-turn-helix domain C1N55_RS20180 PF06445 GyrI-like small molecule binding domain C1N55_RS20190 PF03641 Possible lysine decarboxylase C1N55_RS20195 PF03819 MazG nucleotide pyrophosphohydrolase domain C1N55_RS20200 PF02590 Predicted SPOUT methyltransferase C1N55_RS20210 PF13180 PDZ domain C1N55_RS20215 PF00753 Metallo-beta-lactamase superfamily C1N55_RS20220 PF09648 YycH protein C1N55_RS20225 PF07435 YycH protein C1N55_RS20230 PF00512 His Kinase A (phospho-acceptor) domain C1N55_RS20230 PF00672 HAMP domain C1N55_RS20230 PF13426 PAS domain C1N55_RS20230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C1N55_RS20235 PF00486 Transcriptional regulatory protein, C terminal C1N55_RS20235 PF00072 Response regulator receiver domain C1N55_RS20240 PF01551 Peptidase family M23 C1N55_RS20240 PF10145 Phage-related minor tail protein C1N55_RS20240 PF01464 Transglycosylase SLT domain C1N55_RS20245 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C1N55_RS20245 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C1N55_RS20250 PF00709 Adenylosuccinate synthetase C1N55_RS20255 PF03796 DnaB-like helicase C terminal domain C1N55_RS20255 PF00772 DnaB-like helicase N terminal domain C1N55_RS20260 PF03948 Ribosomal protein L9, C-terminal domain C1N55_RS20260 PF01281 Ribosomal protein L9, N-terminal domain C1N55_RS20265 PF02272 DHHA1 domain C1N55_RS20265 PF01368 DHH family C1N55_RS20275 PF03471 Transporter associated domain C1N55_RS20275 PF00571 CBS domain C1N55_RS20275 PF01595 Cyclin M transmembrane N-terminal domain C1N55_RS20280 PF01084 Ribosomal protein S18 C1N55_RS20285 PF00436 Single-strand binding protein family C1N55_RS20290 PF01250 Ribosomal protein S6 C1N55_RS20305 PF01926 50S ribosome-binding GTPase C1N55_RS20305 PF06071 Protein of unknown function (DUF933) C1N55_RS20310 PF06107 Bacterial protein of unknown function (DUF951) C1N55_RS20315 PF00924 Mechanosensitive ion channel C1N55_RS20320 PF06866 Protein of unknown function (DUF1256) C1N55_RS20325 PF04474 Protein of unknown function (DUF554) C1N55_RS20330 PF17762 HTH domain found in ParB protein C1N55_RS20330 PF02195 ParB-like nuclease domain C1N55_RS20335 PF13614 AAA domain C1N55_RS20340 PF17762 HTH domain found in ParB protein C1N55_RS20340 PF02195 ParB-like nuclease domain C1N55_RS20345 PF02527 rRNA small subunit methyltransferase G C1N55_RS20350 PF13932 GidA associated domain C1N55_RS20350 PF01134 Glucose inhibited division protein A C1N55_RS20355 PF01926 50S ribosome-binding GTPase C1N55_RS20355 PF12631 MnmE helical domain C1N55_RS20355 PF10396 GTP-binding protein TrmE N-terminus C1N55_RS20360 PF14804 Jag N-terminus C1N55_RS20360 PF01424 R3H domain C1N55_RS20365 PF02096 60Kd inner membrane protein C1N55_RS20370 PF00825 Ribonuclease P C1N55_RS20375 PF00468 Ribosomal protein L34