locus-tag	class	description
MSMAL_RS00040	PF03144	Elongation factor Tu domain 2
MSMAL_RS00040	PF03143	Elongation factor Tu C-terminal domain
MSMAL_RS00040	PF00009	Elongation factor Tu GTP binding domain
MSMAL_RS00060	PF00478	IMP dehydrogenase / GMP reductase domain
MSMAL_RS00060	PF00571	CBS domain
MSMAL_RS00065	PF00571	CBS domain
MSMAL_RS00065	PF00478	IMP dehydrogenase / GMP reductase domain
MSMAL_RS00075	PF00571	CBS domain
MSMAL_RS00075	PF00478	IMP dehydrogenase / GMP reductase domain
MSMAL_RS00080	PF00571	CBS domain
MSMAL_RS00095	PF01137	RNA 3'-terminal phosphate cyclase
MSMAL_RS00095	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
MSMAL_RS00100	PF18267	Rubredoxin NAD+ reductase C-terminal domain
MSMAL_RS00100	PF04324	BFD-like [2Fe-2S] binding domain
MSMAL_RS00100	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
MSMAL_RS00100	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
MSMAL_RS00100	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS00120	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS00130	PF02913	FAD linked oxidases, C-terminal domain
MSMAL_RS00130	PF01565	FAD binding domain 
MSMAL_RS00135	PF13183	4Fe-4S dicluster domain
MSMAL_RS00135	PF02754	Cysteine-rich domain
MSMAL_RS00150	PF11842	Domain of unknown function (DUF3362)
MSMAL_RS00150	PF04055	Radical SAM superfamily
MSMAL_RS00150	PF08497	Radical SAM N-terminal
MSMAL_RS00160	PF01026	TatD related DNase
MSMAL_RS00170	PF00682	HMGL-like
MSMAL_RS00170	PF08502	LeuA allosteric (dimerisation) domain
MSMAL_RS00195	PF00210	Ferritin-like domain
MSMAL_RS00220	PF00633	Helix-hairpin-helix motif
MSMAL_RS00220	PF10576	Iron-sulfur binding domain of endonuclease III
MSMAL_RS00220	PF00730	HhH-GPD superfamily base excision DNA repair protein
MSMAL_RS00225	PF08714	Formaldehyde-activating enzyme (Fae)
MSMAL_RS00230	PF05690	Thiazole biosynthesis protein ThiG
MSMAL_RS00235	PF17827	PrmC N-terminal domain
MSMAL_RS00235	PF05175	Methyltransferase small domain
MSMAL_RS00245	PF01817	Chorismate mutase type II
MSMAL_RS00245	PF02153	Prephenate dehydrogenase
MSMAL_RS00250	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
MSMAL_RS00250	PF01488	Shikimate / quinate 5-dehydrogenase
MSMAL_RS00250	PF08501	Shikimate dehydrogenase substrate binding domain
MSMAL_RS00255	PF01487	Type I 3-dehydroquinase
MSMAL_RS00260	PF01959	3-dehydroquinate synthase II
MSMAL_RS00265	PF01791	DeoC/LacD family aldolase
MSMAL_RS00270	PF00117	Glutamine amidotransferase class-I
MSMAL_RS00270	PF00958	GMP synthase C terminal domain
MSMAL_RS00270	PF02540	NAD synthase
MSMAL_RS00275	PF00448	SRP54-type protein, GTPase domain
MSMAL_RS00275	PF02881	SRP54-type protein, helical bundle domain
MSMAL_RS00275	PF02978	Signal peptide binding domain
MSMAL_RS00305	PF00156	Phosphoribosyl transferase domain
MSMAL_RS00325	PF01434	Peptidase family M41
MSMAL_RS00325	PF17862	AAA+ lid domain
MSMAL_RS00325	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS00330	PF00011	Hsp20/alpha crystallin family
MSMAL_RS00355	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
MSMAL_RS00355	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
MSMAL_RS00360	PF03481	Putative GTP-binding controlling metal-binding
MSMAL_RS00360	PF01300	Telomere recombination
MSMAL_RS00410	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
MSMAL_RS00415	PF00303	Thymidylate synthase
MSMAL_RS00420	PF01435	Peptidase family M48
MSMAL_RS00430	PF04471	Restriction endonuclease
MSMAL_RS00430	PF14338	Mrr N-terminal domain
MSMAL_RS00435	PF01872	RibD C-terminal domain
MSMAL_RS00460	PF00795	Carbon-nitrogen hydrolase
MSMAL_RS00465	PF02934	GatB/GatE catalytic domain
MSMAL_RS00465	PF02637	GatB domain
MSMAL_RS00470	PF01425	Amidase
MSMAL_RS00475	PF02686	Glu-tRNAGln amidotransferase C subunit
MSMAL_RS00480	PF04432	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
MSMAL_RS00480	PF04422	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
MSMAL_RS00495	PF02649	Type I GTP cyclohydrolase folE2
MSMAL_RS00505	PF00696	Amino acid kinase family
MSMAL_RS00515	PF00958	GMP synthase C terminal domain
MSMAL_RS00515	PF00117	Glutamine amidotransferase class-I
MSMAL_RS00515	PF02568	Thiamine biosynthesis protein (ThiI)
MSMAL_RS00520	PF16124	RecQ zinc-binding
MSMAL_RS00520	PF00570	HRDC domain
MSMAL_RS00520	PF00270	DEAD/DEAH box helicase
MSMAL_RS00520	PF00271	Helicase conserved C-terminal domain
MSMAL_RS00520	PF09382	RQC domain
MSMAL_RS00530	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
MSMAL_RS00540	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
MSMAL_RS00540	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
MSMAL_RS00545	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
MSMAL_RS00545	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
MSMAL_RS00595	PF05173	Dihydrodipicolinate reductase, C-terminus
MSMAL_RS00595	PF01113	Dihydrodipicolinate reductase, N-terminus
MSMAL_RS00600	PF00701	Dihydrodipicolinate synthetase family
MSMAL_RS00635	PF01370	NAD dependent epimerase/dehydratase family
MSMAL_RS00665	PF00535	Glycosyl transferase family 2
MSMAL_RS00670	PF00535	Glycosyl transferase family 2
MSMAL_RS00675	PF00535	Glycosyl transferase family 2
MSMAL_RS00685	PF00534	Glycosyl transferases group 1
MSMAL_RS00685	PF13439	Glycosyltransferase Family 4
MSMAL_RS00705	PF04321	RmlD substrate binding domain
MSMAL_RS00710	PF16363	GDP-mannose 4,6 dehydratase
MSMAL_RS00715	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
MSMAL_RS00720	PF00535	Glycosyl transferase family 2
MSMAL_RS00735	PF01934	Protein of unknown function DUF86
MSMAL_RS00740	PF01934	Protein of unknown function DUF86
MSMAL_RS00750	PF16363	GDP-mannose 4,6 dehydratase
MSMAL_RS00765	PF00708	Acylphosphatase
MSMAL_RS00790	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
MSMAL_RS00790	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
MSMAL_RS00790	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
MSMAL_RS00795	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
MSMAL_RS00795	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
MSMAL_RS00800	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
MSMAL_RS00820	PF00535	Glycosyl transferase family 2
MSMAL_RS00840	PF13439	Glycosyltransferase Family 4
MSMAL_RS00840	PF00534	Glycosyl transferases group 1
MSMAL_RS00845	PF13477	Glycosyl transferase 4-like
MSMAL_RS00845	PF00534	Glycosyl transferases group 1
MSMAL_RS00850	PF00535	Glycosyl transferase family 2
MSMAL_RS00855	PF00535	Glycosyl transferase family 2
MSMAL_RS00860	PF00535	Glycosyl transferase family 2
MSMAL_RS00865	PF13439	Glycosyltransferase Family 4
MSMAL_RS00865	PF00534	Glycosyl transferases group 1
MSMAL_RS00870	PF13439	Glycosyltransferase Family 4
MSMAL_RS00870	PF00534	Glycosyl transferases group 1
MSMAL_RS00885	PF01370	NAD dependent epimerase/dehydratase family
MSMAL_RS00890	PF00483	Nucleotidyl transferase
MSMAL_RS00895	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
MSMAL_RS00895	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
MSMAL_RS00895	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
MSMAL_RS00920	PF00535	Glycosyl transferase family 2
MSMAL_RS00925	PF00534	Glycosyl transferases group 1
MSMAL_RS00925	PF13439	Glycosyltransferase Family 4
MSMAL_RS00945	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
MSMAL_RS00945	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
MSMAL_RS00950	PF01501	Glycosyl transferase family 8
MSMAL_RS00950	PF00535	Glycosyl transferase family 2
MSMAL_RS00970	PF01522	Polysaccharide deacetylase
MSMAL_RS00985	PF04476	4-HFC-P synthase
MSMAL_RS00990	PF00977	Histidine biosynthesis protein
MSMAL_RS01000	PF02223	Thymidylate kinase
MSMAL_RS01035	PF08669	Glycine cleavage T-protein C-terminal barrel domain
MSMAL_RS01035	PF01571	Aminomethyltransferase folate-binding domain
MSMAL_RS01035	PF17806	Sarcosine oxidase A3 domain
MSMAL_RS01035	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS01040	PF01040	UbiA prenyltransferase family
MSMAL_RS01045	PF01702	Queuine tRNA-ribosyltransferase
MSMAL_RS01065	PF00118	TCP-1/cpn60 chaperonin family
MSMAL_RS01085	PF07689	KaiB domain
MSMAL_RS01090	PF07689	KaiB domain
MSMAL_RS01095	PF06745	KaiC
MSMAL_RS01100	PF06745	KaiC
MSMAL_RS01110	PF01458	Uncharacterized protein family (UPF0051)
MSMAL_RS01110	PF14528	LAGLIDADG-like domain
MSMAL_RS01115	PF00005	ABC transporter
MSMAL_RS01120	PF12706	Beta-lactamase superfamily domain
MSMAL_RS01135	PF01255	Putative undecaprenyl diphosphate synthase
MSMAL_RS01140	PF06071	Protein of unknown function (DUF933)
MSMAL_RS01140	PF01926	50S ribosome-binding GTPase
MSMAL_RS01185	PF01184	GPR1/FUN34/yaaH family
MSMAL_RS01195	PF02310	B12 binding domain
MSMAL_RS01195	PF02607	B12 binding domain
MSMAL_RS01200	PF02492	CobW/HypB/UreG, nucleotide-binding domain
MSMAL_RS01200	PF07683	Cobalamin synthesis protein cobW C-terminal domain
MSMAL_RS01215	PF00690	Cation transporter/ATPase, N-terminus
MSMAL_RS01215	PF00689	Cation transporting ATPase, C-terminus
MSMAL_RS01220	PF00072	Response regulator receiver domain
MSMAL_RS01230	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS01235	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
MSMAL_RS01235	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
MSMAL_RS01235	PF00374	Nickel-dependent hydrogenase
MSMAL_RS01240	PF00361	Proton-conducting membrane transporter
MSMAL_RS01255	PF00361	Proton-conducting membrane transporter
MSMAL_RS01265	PF13732	Domain of unknown function (DUF4162)
MSMAL_RS01265	PF00005	ABC transporter
MSMAL_RS01275	PF02310	B12 binding domain
MSMAL_RS01275	PF02607	B12 binding domain
MSMAL_RS01320	PF03600	Citrate transporter
MSMAL_RS01325	PF01820	D-ala D-ala ligase N-terminus
MSMAL_RS01325	PF07478	D-ala D-ala ligase C-terminus
MSMAL_RS01330	PF01926	50S ribosome-binding GTPase
MSMAL_RS01330	PF01018	GTP1/OBG
MSMAL_RS01330	PF09269	Domain of unknown function (DUF1967)
MSMAL_RS01335	PF00994	Probable molybdopterin binding domain
MSMAL_RS01335	PF03454	MoeA C-terminal region (domain IV)
MSMAL_RS01335	PF03453	MoeA N-terminal region (domain I and II)
MSMAL_RS01340	PF01063	Amino-transferase class IV
MSMAL_RS01370	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS01380	PF02361	Cobalt transport protein
MSMAL_RS01385	PF00005	ABC transporter
MSMAL_RS01390	PF00005	ABC transporter
MSMAL_RS01395	PF02632	BioY family
MSMAL_RS01405	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS01415	PF04023	FeoA domain
MSMAL_RS01415	PF07664	Ferrous iron transport protein B C terminus
MSMAL_RS01415	PF07670	Nucleoside recognition
MSMAL_RS01415	PF17910	FeoB cytosolic helical domain
MSMAL_RS01415	PF02421	Ferrous iron transport protein B
MSMAL_RS01430	PF02463	RecF/RecN/SMC N terminal domain
MSMAL_RS01430	PF06470	SMC proteins Flexible Hinge Domain
MSMAL_RS01435	PF02616	Segregation and condensation protein ScpA
MSMAL_RS01440	PF04079	Segregation and condensation complex subunit ScpB
MSMAL_RS01460	PF01964	Radical SAM ThiC family
MSMAL_RS01470	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
MSMAL_RS01470	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
MSMAL_RS01505	PF04055	Radical SAM superfamily
MSMAL_RS01505	PF13186	Iron-sulfur cluster-binding domain
MSMAL_RS01515	PF00466	Ribosomal protein L10
MSMAL_RS01520	PF00687	Ribosomal protein L1p/L10e family
MSMAL_RS01525	PF03946	Ribosomal protein L11, N-terminal domain
MSMAL_RS01525	PF00298	Ribosomal protein L11, RNA binding domain
MSMAL_RS01540	PF12327	FtsZ family, C-terminal domain
MSMAL_RS01540	PF00091	Tubulin/FtsZ family, GTPase domain
MSMAL_RS01555	PF01434	Peptidase family M41
MSMAL_RS01555	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS01555	PF17862	AAA+ lid domain
MSMAL_RS01555	PF06480	FtsH Extracellular
MSMAL_RS01570	PF18324	Hypothetical protein TT1725
MSMAL_RS01570	PF00180	Isocitrate/isopropylmalate dehydrogenase
MSMAL_RS01575	PF00682	HMGL-like
MSMAL_RS01580	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
MSMAL_RS01585	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
MSMAL_RS01590	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
MSMAL_RS01595	PF11761	Cobalamin biosynthesis central region
MSMAL_RS01595	PF01890	Cobalamin synthesis G C-terminus
MSMAL_RS01595	PF11760	Cobalamin synthesis G N-terminal
MSMAL_RS01605	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
MSMAL_RS01610	PF02570	Precorrin-8X methylmutase
MSMAL_RS01620	PF00578	AhpC/TSA family
MSMAL_RS01620	PF02683	Cytochrome C biogenesis protein transmembrane region
MSMAL_RS01620	PF17991	Thioredoxin like C-terminal domain
MSMAL_RS01625	PF00085	Thioredoxin
MSMAL_RS01630	PF10609	NUBPL iron-transfer P-loop NTPase
MSMAL_RS01635	PF02001	Protein of unknown function  DUF134
MSMAL_RS01650	PF10609	NUBPL iron-transfer P-loop NTPase
MSMAL_RS01675	PF02754	Cysteine-rich domain
MSMAL_RS01705	PF00557	Metallopeptidase family M24
MSMAL_RS01840	PF13187	4Fe-4S dicluster domain
MSMAL_RS01840	PF01645	Conserved region in glutamate synthase
MSMAL_RS01845	PF00310	Glutamine amidotransferases class-II
MSMAL_RS01855	PF03951	Glutamine synthetase, beta-Grasp domain
MSMAL_RS01855	PF00120	Glutamine synthetase, catalytic domain
MSMAL_RS01860	PF03073	TspO/MBR family
MSMAL_RS01885	PF00543	Nitrogen regulatory protein P-II
MSMAL_RS01890	PF00909	Ammonium Transporter Family
MSMAL_RS01900	PF13732	Domain of unknown function (DUF4162)
MSMAL_RS01900	PF00005	ABC transporter
MSMAL_RS01915	PF00005	ABC transporter
MSMAL_RS01925	PF12704	MacB-like periplasmic core domain
MSMAL_RS01925	PF02687	FtsX-like permease family
MSMAL_RS01930	PF00005	ABC transporter
MSMAL_RS01940	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS01940	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS01945	PF12704	MacB-like periplasmic core domain
MSMAL_RS01945	PF02687	FtsX-like permease family
MSMAL_RS01960	PF09383	NIL domain
MSMAL_RS01960	PF00005	ABC transporter
MSMAL_RS01965	PF01884	PcrB family
MSMAL_RS01975	PF10397	Adenylosuccinate lyase C-terminus
MSMAL_RS01975	PF00206	Lyase
MSMAL_RS01995	PF06745	KaiC
MSMAL_RS02000	PF00437	Type II/IV secretion system protein
MSMAL_RS02015	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS02020	PF04055	Radical SAM superfamily
MSMAL_RS02020	PF12544	Lysine-2,3-aminomutase 
MSMAL_RS02025	PF00999	Sodium/hydrogen exchanger family
MSMAL_RS02025	PF02254	TrkA-N domain
MSMAL_RS02030	PF07556	Protein of unknown function (DUF1538)
MSMAL_RS02035	PF07556	Protein of unknown function (DUF1538)
MSMAL_RS02045	PF02254	TrkA-N domain
MSMAL_RS02045	PF02080	TrkA-C domain
MSMAL_RS02045	PF00999	Sodium/hydrogen exchanger family
MSMAL_RS02055	PF01381	Helix-turn-helix
MSMAL_RS02075	PF00491	Arginase family
MSMAL_RS02090	PF00293	NUDIX domain
MSMAL_RS02095	PF00413	Matrixin
MSMAL_RS02100	PF02627	Carboxymuconolactone decarboxylase family
MSMAL_RS02115	PF01869	BadF/BadG/BcrA/BcrD ATPase family
MSMAL_RS02135	PF12558	ATP-binding cassette cobalt transporter
MSMAL_RS02135	PF00005	ABC transporter
MSMAL_RS02160	PF01367	5'-3' exonuclease, C-terminal SAM fold
MSMAL_RS02160	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
MSMAL_RS02170	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
MSMAL_RS02170	PF01676	Metalloenzyme superfamily
MSMAL_RS02180	PF01184	GPR1/FUN34/yaaH family
MSMAL_RS02185	PF13649	Methyltransferase domain
MSMAL_RS02190	PF00689	Cation transporting ATPase, C-terminus
MSMAL_RS02190	PF00690	Cation transporter/ATPase, N-terminus
MSMAL_RS02205	PF01808	AICARFT/IMPCHase bienzyme
MSMAL_RS02205	PF02142	MGS-like domain
MSMAL_RS02210	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS02210	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
MSMAL_RS02215	PF00633	Helix-hairpin-helix motif
MSMAL_RS02215	PF00730	HhH-GPD superfamily base excision DNA repair protein
MSMAL_RS02225	PF01891	Cobalt uptake substrate-specific transmembrane region
MSMAL_RS02230	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS02245	PF07568	Histidine kinase
MSMAL_RS02245	PF12282	Signal transduction histidine kinase
MSMAL_RS02245	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS02250	PF02361	Cobalt transport protein
MSMAL_RS02255	PF00005	ABC transporter
MSMAL_RS02260	PF11799	impB/mucB/samB family C-terminal domain
MSMAL_RS02260	PF00817	impB/mucB/samB family
MSMAL_RS02300	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
MSMAL_RS02300	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
MSMAL_RS02305	PF02803	Thiolase, C-terminal domain
MSMAL_RS02305	PF00108	Thiolase, N-terminal domain
MSMAL_RS02320	PF08264	Anticodon-binding domain of tRNA
MSMAL_RS02320	PF01588	Putative tRNA binding domain
MSMAL_RS02320	PF09334	tRNA synthetases class I (M)
MSMAL_RS02325	PF01343	Peptidase family S49
MSMAL_RS02330	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
MSMAL_RS02330	PF02403	Seryl-tRNA synthetase N-terminal domain
MSMAL_RS02355	PF02769	AIR synthase related protein, C-terminal domain
MSMAL_RS02355	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
MSMAL_RS02355	PF00586	AIR synthase related protein, N-terminal domain
MSMAL_RS02380	PF01259	SAICAR synthetase
MSMAL_RS02385	PF01434	Peptidase family M41
MSMAL_RS02385	PF17862	AAA+ lid domain
MSMAL_RS02385	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS02390	PF03099	Biotin/lipoate A/B protein ligase family
MSMAL_RS02390	PF12706	Beta-lactamase superfamily domain
MSMAL_RS02405	PF04070	Domain of unknown function (DUF378)
MSMAL_RS02410	PF00578	AhpC/TSA family
MSMAL_RS02445	PF08753	NikR C terminal nickel binding domain
MSMAL_RS02445	PF01402	Ribbon-helix-helix protein, copG family
MSMAL_RS02455	PF00535	Glycosyl transferase family 2
MSMAL_RS02465	PF00171	Aldehyde dehydrogenase family
MSMAL_RS02475	PF01593	Flavin containing amine oxidoreductase
MSMAL_RS02480	PF00689	Cation transporting ATPase, C-terminus
MSMAL_RS02480	PF00690	Cation transporter/ATPase, N-terminus
MSMAL_RS02505	PF03453	MoeA N-terminal region (domain I and II)
MSMAL_RS02505	PF03454	MoeA C-terminal region (domain IV)
MSMAL_RS02505	PF00994	Probable molybdopterin binding domain
MSMAL_RS02510	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
MSMAL_RS02515	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
MSMAL_RS02525	PF01872	RibD C-terminal domain
MSMAL_RS02525	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
MSMAL_RS02530	PF00571	CBS domain
MSMAL_RS02535	PF00582	Universal stress protein family
MSMAL_RS02540	PF01979	Amidohydrolase family
MSMAL_RS02560	PF00171	Aldehyde dehydrogenase family
MSMAL_RS02565	PF00696	Amino acid kinase family
MSMAL_RS02565	PF01472	PUA domain
MSMAL_RS02570	PF03807	NADP oxidoreductase coenzyme F420-dependent
MSMAL_RS02570	PF14748	Pyrroline-5-carboxylate reductase dimerisation
MSMAL_RS02575	PF00578	AhpC/TSA family
MSMAL_RS02575	PF10417	C-terminal domain of 1-Cys peroxiredoxin
MSMAL_RS02590	PF04024	PspC domain
MSMAL_RS02595	PF00448	SRP54-type protein, GTPase domain
MSMAL_RS02595	PF02881	SRP54-type protein, helical bundle domain
MSMAL_RS02640	PF00709	Adenylosuccinate synthetase
MSMAL_RS02655	PF01434	Peptidase family M41
MSMAL_RS02655	PF17862	AAA+ lid domain
MSMAL_RS02655	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS02710	PF00348	Polyprenyl synthetase
MSMAL_RS02730	PF01496	V-type ATPase 116kDa subunit family  
MSMAL_RS02755	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
MSMAL_RS02755	PF02874	ATP synthase alpha/beta family, beta-barrel domain
MSMAL_RS02755	PF16886	ATPsynthase alpha/beta subunit N-term extension
MSMAL_RS02760	PF02874	ATP synthase alpha/beta family, beta-barrel domain
MSMAL_RS02760	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
MSMAL_RS02765	PF01813	ATP synthase subunit D 
MSMAL_RS02775	PF01300	Telomere recombination
MSMAL_RS02775	PF00708	Acylphosphatase
MSMAL_RS02775	PF07503	HypF finger
MSMAL_RS02775	PF17788	HypF Kae1-like domain
MSMAL_RS02795	PF06150	ChaB
MSMAL_RS02865	PF00586	AIR synthase related protein, N-terminal domain
MSMAL_RS02865	PF02769	AIR synthase related protein, C-terminal domain
MSMAL_RS02875	PF04055	Radical SAM superfamily
MSMAL_RS02875	PF02579	Dinitrogenase iron-molybdenum cofactor
MSMAL_RS02885	PF04055	Radical SAM superfamily
MSMAL_RS02885	PF02579	Dinitrogenase iron-molybdenum cofactor
MSMAL_RS02890	PF01242	6-pyruvoyl tetrahydropterin synthase
MSMAL_RS02895	PF04055	Radical SAM superfamily
MSMAL_RS02905	PF06508	Queuosine biosynthesis protein QueC
MSMAL_RS02930	PF13823	Alcohol dehydrogenase GroES-associated
MSMAL_RS02930	PF00107	Zinc-binding dehydrogenase
MSMAL_RS02930	PF08240	Alcohol dehydrogenase GroES-like domain
MSMAL_RS02935	PF13847	Methyltransferase domain
MSMAL_RS02940	PF00271	Helicase conserved C-terminal domain
MSMAL_RS02940	PF00270	DEAD/DEAH box helicase
MSMAL_RS02960	PF02627	Carboxymuconolactone decarboxylase family
MSMAL_RS02965	PF01758	Sodium Bile acid symporter family
MSMAL_RS02975	PF08859	DGC domain
MSMAL_RS02990	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
MSMAL_RS03000	PF00909	Ammonium Transporter Family
MSMAL_RS03005	PF00543	Nitrogen regulatory protein P-II
MSMAL_RS03010	PF08241	Methyltransferase domain
MSMAL_RS03025	PF08402	TOBE domain
MSMAL_RS03025	PF00005	ABC transporter
MSMAL_RS03030	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS03040	PF00148	Nitrogenase component 1 type Oxidoreductase
MSMAL_RS03040	PF11844	Domain of unknown function (DUF3364)
MSMAL_RS03045	PF00148	Nitrogenase component 1 type Oxidoreductase
MSMAL_RS03050	PF00148	Nitrogenase component 1 type Oxidoreductase
MSMAL_RS03055	PF00148	Nitrogenase component 1 type Oxidoreductase
MSMAL_RS03060	PF00543	Nitrogen regulatory protein P-II
MSMAL_RS03065	PF00543	Nitrogen regulatory protein P-II
MSMAL_RS03070	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
MSMAL_RS03075	PF01266	FAD dependent oxidoreductase
MSMAL_RS03090	PF02887	Pyruvate kinase, alpha/beta domain
MSMAL_RS03090	PF00224	Pyruvate kinase, barrel domain
MSMAL_RS03090	PF00391	PEP-utilising enzyme, mobile domain
MSMAL_RS03135	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
MSMAL_RS03135	PF09180	Prolyl-tRNA synthetase, C-terminal
MSMAL_RS03135	PF03129	Anticodon binding domain
MSMAL_RS03165	PF03030	Inorganic H+ pyrophosphatase
MSMAL_RS03170	PF03030	Inorganic H+ pyrophosphatase
MSMAL_RS03180	PF14251	Domain of unknown function (DUF4346)
MSMAL_RS03185	PF00091	Tubulin/FtsZ family, GTPase domain
MSMAL_RS03185	PF12327	FtsZ family, C-terminal domain
MSMAL_RS03190	PF13419	Haloacid dehalogenase-like hydrolase
MSMAL_RS03195	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS03195	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
MSMAL_RS03195	PF10996	Beta-Casp domain
MSMAL_RS03215	PF02655	ATP-grasp domain
MSMAL_RS03215	PF00206	Lyase
MSMAL_RS03225	PF04060	Putative Fe-S cluster
MSMAL_RS03225	PF03599	CO dehydrogenase/acetyl-CoA synthase delta subunit
MSMAL_RS03235	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS03240	PF03598	CO dehydrogenase/acetyl-CoA synthase complex beta subunit
MSMAL_RS03240	PF18537	Carbon monoxide dehydrogenase subunit alpha N-terminal domain
MSMAL_RS03290	PF14535	AMP-binding enzyme C-terminal domain
MSMAL_RS03290	PF00501	AMP-binding enzyme
MSMAL_RS03305	PF05343	M42 glutamyl aminopeptidase
MSMAL_RS03325	PF13167	GTP-binding GTPase N-terminal
MSMAL_RS03325	PF16360	GTP-binding GTPase Middle Region
MSMAL_RS03325	PF01926	50S ribosome-binding GTPase
MSMAL_RS03340	PF07685	CobB/CobQ-like glutamine amidotransferase domain
MSMAL_RS03340	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS03345	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
MSMAL_RS03365	PF12282	Signal transduction histidine kinase
MSMAL_RS03365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS03365	PF07568	Histidine kinase
MSMAL_RS03405	PF12697	Alpha/beta hydrolase family
MSMAL_RS03410	PF13520	Amino acid permease
MSMAL_RS03450	PF07883	Cupin domain
MSMAL_RS03460	PF00149	Calcineurin-like phosphoesterase
MSMAL_RS03490	PF00773	RNB domain
MSMAL_RS03490	PF17876	Cold shock domain
MSMAL_RS03490	PF08206	Ribonuclease B OB domain
MSMAL_RS03490	PF00575	S1 RNA binding domain
MSMAL_RS03530	PF09827	CRISPR associated protein Cas2
MSMAL_RS03535	PF01867	CRISPR associated protein Cas1
MSMAL_RS03575	PF00271	Helicase conserved C-terminal domain
MSMAL_RS03575	PF00270	DEAD/DEAH box helicase
MSMAL_RS03575	PF18019	HD domain
MSMAL_RS03605	PF13302	Acetyltransferase (GNAT) domain
MSMAL_RS03620	PF00005	ABC transporter
MSMAL_RS03625	PF00149	Calcineurin-like phosphoesterase
MSMAL_RS03630	PF00245	Alkaline phosphatase
MSMAL_RS03635	PF06146	Phosphate-starvation-inducible E
MSMAL_RS03640	PF01451	Low molecular weight phosphotyrosine protein phosphatase
MSMAL_RS03645	PF00872	Transposase, Mutator family
MSMAL_RS03655	PF01895	PhoU domain
MSMAL_RS03660	PF00005	ABC transporter
MSMAL_RS03660	PF00005	ABC transporter
MSMAL_RS03665	PF12849	PBP superfamily domain
MSMAL_RS03710	PF00534	Glycosyl transferases group 1
MSMAL_RS03710	PF13439	Glycosyltransferase Family 4
MSMAL_RS03725	PF13685	Iron-containing alcohol dehydrogenase
MSMAL_RS03745	PF00009	Elongation factor Tu GTP binding domain
MSMAL_RS03745	PF09105	Elongation factor SelB, winged helix 
MSMAL_RS03745	PF09106	Elongation factor SelB, winged helix 
MSMAL_RS03745	PF09107	Elongation factor SelB, winged helix 
MSMAL_RS03745	PF03144	Elongation factor Tu domain 2
MSMAL_RS03755	PF00013	KH domain
MSMAL_RS03755	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS03755	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS03755	PF03725	3' exoribonuclease family, domain 2
MSMAL_RS03755	PF00575	S1 RNA binding domain
MSMAL_RS03785	PF00814	Glycoprotease family
MSMAL_RS03790	PF01725	Ham1 family
MSMAL_RS03805	PF04199	Putative cyclase
MSMAL_RS03825	PF12464	Maltose acetyltransferase 
MSMAL_RS03825	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS03825	PF14602	Hexapeptide repeat of succinyl-transferase
MSMAL_RS03830	PF04015	Domain of unknown function (DUF362) 
MSMAL_RS03835	PF02540	NAD synthase
MSMAL_RS03845	PF13193	AMP-binding enzyme C-terminal domain
MSMAL_RS03845	PF00501	AMP-binding enzyme
MSMAL_RS03865	PF01255	Putative undecaprenyl diphosphate synthase
MSMAL_RS03870	PF03190	Protein of unknown function, DUF255
MSMAL_RS03910	PF04432	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
MSMAL_RS03910	PF04422	Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
MSMAL_RS03915	PF00296	Luciferase-like monooxygenase
MSMAL_RS03920	PF06397	Desulfoferrodoxin, N-terminal domain
MSMAL_RS03940	PF01880	Desulfoferrodoxin
MSMAL_RS03940	PF06397	Desulfoferrodoxin, N-terminal domain
MSMAL_RS03950	PF03358	NADPH-dependent FMN reductase
MSMAL_RS03970	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS03970	PF00258	Flavodoxin
MSMAL_RS03975	PF03306	Alpha-acetolactate decarboxylase
MSMAL_RS03990	PF00180	Isocitrate/isopropylmalate dehydrogenase
MSMAL_RS03995	PF02659	Putative manganese efflux pump
MSMAL_RS04005	PF00694	Aconitase C-terminal domain
MSMAL_RS04030	PF13439	Glycosyltransferase Family 4
MSMAL_RS04030	PF00534	Glycosyl transferases group 1
MSMAL_RS04040	PF00535	Glycosyl transferase family 2
MSMAL_RS04045	PF13439	Glycosyltransferase Family 4
MSMAL_RS04045	PF00534	Glycosyl transferases group 1
MSMAL_RS04050	PF00535	Glycosyl transferase family 2
MSMAL_RS04060	PF01050	Mannose-6-phosphate isomerase
MSMAL_RS04060	PF00483	Nucleotidyl transferase
MSMAL_RS04065	PF13847	Methyltransferase domain
MSMAL_RS04070	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS04075	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
MSMAL_RS04075	PF00175	Oxidoreductase NAD-binding domain 
MSMAL_RS04080	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
MSMAL_RS04080	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS04095	PF08753	NikR C terminal nickel binding domain
MSMAL_RS04095	PF01402	Ribbon-helix-helix protein, copG family
MSMAL_RS04100	PF00881	Nitroreductase family
MSMAL_RS04105	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
MSMAL_RS04105	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
MSMAL_RS04110	PF10369	Small subunit of acetolactate synthase
MSMAL_RS04115	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
MSMAL_RS04115	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
MSMAL_RS04115	PF00205	Thiamine pyrophosphate enzyme, central domain
MSMAL_RS04120	PF08502	LeuA allosteric (dimerisation) domain
MSMAL_RS04120	PF00682	HMGL-like
MSMAL_RS04145	PF01208	Uroporphyrinogen decarboxylase (URO-D)
MSMAL_RS04190	PF00654	Voltage gated chloride channel
MSMAL_RS04195	PF03358	NADPH-dependent FMN reductase
MSMAL_RS04200	PF01515	Phosphate acetyl/butaryl transferase
MSMAL_RS04205	PF00871	Acetokinase family
MSMAL_RS04245	PF03167	Uracil DNA glycosylase superfamily
MSMAL_RS04250	PF00162	Phosphoglycerate kinase
MSMAL_RS04265	PF00011	Hsp20/alpha crystallin family
MSMAL_RS04295	PF13635	Domain of unknown function (DUF4143)
MSMAL_RS04295	PF13173	AAA domain
MSMAL_RS04315	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS04320	PF05014	Nucleoside 2-deoxyribosyltransferase
MSMAL_RS04330	PF02774	Semialdehyde dehydrogenase, dimerisation domain
MSMAL_RS04330	PF01118	Semialdehyde dehydrogenase, NAD binding domain
MSMAL_RS04335	PF00571	CBS domain
MSMAL_RS04340	PF01960	ArgJ family
MSMAL_RS04400	PF01891	Cobalt uptake substrate-specific transmembrane region
MSMAL_RS04405	PF02553	Cobalt transport protein component CbiN
MSMAL_RS04415	PF00005	ABC transporter
MSMAL_RS04435	PF01467	Cytidylyltransferase-like
MSMAL_RS04495	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS04505	PF17862	AAA+ lid domain
MSMAL_RS04505	PF01434	Peptidase family M41
MSMAL_RS04505	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS04505	PF06480	FtsH Extracellular
MSMAL_RS04510	PF02540	NAD synthase
MSMAL_RS04525	PF00551	Formyl transferase
MSMAL_RS04530	PF00464	Serine hydroxymethyltransferase
MSMAL_RS04535	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
MSMAL_RS04535	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
MSMAL_RS04540	PF00809	Pterin binding enzyme
MSMAL_RS04560	PF00085	Thioredoxin
MSMAL_RS04595	PF18766	SWI2/SNF2 ATPase
MSMAL_RS04595	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS04595	PF11867	Domain of unknown function (DUF3387)
MSMAL_RS04600	PF01420	Type I restriction modification DNA specificity domain
MSMAL_RS04605	PF02384	N-6 DNA Methylase
MSMAL_RS04625	PF00005	ABC transporter
MSMAL_RS04630	PF00270	DEAD/DEAH box helicase
MSMAL_RS04630	PF08148	DSHCT (NUC185) domain
MSMAL_RS04630	PF00271	Helicase conserved C-terminal domain
MSMAL_RS04635	PF00815	Histidinol dehydrogenase
MSMAL_RS04645	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
MSMAL_RS04645	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
MSMAL_RS04645	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
MSMAL_RS04650	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
MSMAL_RS04680	PF00437	Type II/IV secretion system protein
MSMAL_RS04705	PF00330	Aconitase family (aconitate hydratase)
MSMAL_RS04735	PF00665	Integrase core domain
MSMAL_RS04735	PF02796	Helix-turn-helix domain of resolvase
MSMAL_RS04740	PF01695	IstB-like ATP binding protein
MSMAL_RS04760	PF13614	AAA domain
MSMAL_RS04790	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
MSMAL_RS04790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS04825	PF13630	SdpI/YhfL protein family
MSMAL_RS04825	PF07853	Protein of unknown function (DUF1648)
MSMAL_RS04830	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
MSMAL_RS04835	PF05697	Bacterial trigger factor protein (TF)
MSMAL_RS04835	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
MSMAL_RS04835	PF05698	Bacterial trigger factor protein (TF) C-terminus
MSMAL_RS04840	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
MSMAL_RS04850	PF00483	Nucleotidyl transferase
MSMAL_RS04880	PF07726	ATPase family associated with various cellular activities (AAA)
MSMAL_RS04880	PF17863	AAA lid domain
MSMAL_RS04890	PF00800	Prephenate dehydratase
MSMAL_RS04890	PF01817	Chorismate mutase type II
MSMAL_RS04890	PF01842	ACT domain
MSMAL_RS04930	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
MSMAL_RS04930	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
MSMAL_RS04935	PF01638	HxlR-like helix-turn-helix
MSMAL_RS04940	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
MSMAL_RS04940	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
MSMAL_RS04945	PF01638	HxlR-like helix-turn-helix
MSMAL_RS04950	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS04950	PF13607	Succinyl-CoA ligase like flavodoxin domain
MSMAL_RS04950	PF13380	CoA binding domain
MSMAL_RS04955	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
MSMAL_RS04955	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
MSMAL_RS04990	PF00581	Rhodanese-like domain
MSMAL_RS05010	PF01047	MarR family
MSMAL_RS05020	PF01554	MatE
MSMAL_RS05035	PF01894	Uncharacterised protein family UPF0047
MSMAL_RS05040	PF00156	Phosphoribosyl transferase domain
MSMAL_RS05050	PF08543	Phosphomethylpyrimidine kinase
MSMAL_RS05055	PF00291	Pyridoxal-phosphate dependent enzyme
MSMAL_RS05075	PF17202	Single cache domain 3
MSMAL_RS05075	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
MSMAL_RS05075	PF00672	HAMP domain
MSMAL_RS05080	PF01584	CheW-like domain
MSMAL_RS05090	PF00072	Response regulator receiver domain
MSMAL_RS05095	PF00072	Response regulator receiver domain
MSMAL_RS05095	PF01339	CheB methylesterase
MSMAL_RS05110	PF03975	CheD chemotactic sensory transduction
MSMAL_RS05115	PF03705	CheR methyltransferase, all-alpha domain
MSMAL_RS05115	PF01739	CheR methyltransferase, SAM binding domain
MSMAL_RS05150	PF00437	Type II/IV secretion system protein
MSMAL_RS05170	PF08264	Anticodon-binding domain of tRNA
MSMAL_RS05170	PF00133	tRNA synthetases class I (I, L, M and V)
MSMAL_RS05200	PF13186	Iron-sulfur cluster-binding domain
MSMAL_RS05200	PF04055	Radical SAM superfamily
MSMAL_RS05210	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
MSMAL_RS05215	PF12706	Beta-lactamase superfamily domain
MSMAL_RS05215	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS05225	PF01434	Peptidase family M41
MSMAL_RS05225	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS05225	PF17862	AAA+ lid domain
MSMAL_RS05225	PF06480	FtsH Extracellular
MSMAL_RS05240	PF00483	Nucleotidyl transferase
MSMAL_RS05245	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
MSMAL_RS05245	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
MSMAL_RS05245	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
MSMAL_RS05245	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
MSMAL_RS05250	PF01380	SIS domain
MSMAL_RS05255	PF00483	Nucleotidyl transferase
MSMAL_RS05255	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS05265	PF00571	CBS domain
MSMAL_RS05265	PF00005	ABC transporter
MSMAL_RS05275	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS05280	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS05285	PF06826	Predicted Permease Membrane Region
MSMAL_RS05285	PF02080	TrkA-C domain
MSMAL_RS05320	PF01916	Deoxyhypusine synthase
MSMAL_RS05325	PF01862	Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
MSMAL_RS05335	PF00795	Carbon-nitrogen hydrolase
MSMAL_RS05340	PF00133	tRNA synthetases class I (I, L, M and V)
MSMAL_RS05340	PF08264	Anticodon-binding domain of tRNA
MSMAL_RS05340	PF13603	Leucyl-tRNA synthetase, Domain 2
MSMAL_RS05345	PF00291	Pyridoxal-phosphate dependent enzyme
MSMAL_RS05385	PF00145	C-5 cytosine-specific DNA methylase
MSMAL_RS05385	PF12728	Helix-turn-helix domain
MSMAL_RS05420	PF05547	Immune inhibitor A peptidase M6
MSMAL_RS05420	PF00801	PKD domain
MSMAL_RS05435	PF01043	SecA preprotein cross-linking domain
MSMAL_RS05435	PF07516	SecA Wing and Scaffold domain
MSMAL_RS05435	PF07517	SecA DEAD-like domain
MSMAL_RS05440	PF00258	Flavodoxin
MSMAL_RS05440	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS05445	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS05445	PF08448	PAS fold
MSMAL_RS05445	PF08447	PAS fold
MSMAL_RS05450	PF00920	Dehydratase family
MSMAL_RS05460	PF02007	Tetrahydromethanopterin S-methyltransferase MtrH subunit
MSMAL_RS05505	PF12161	HsdM N-terminal domain
MSMAL_RS05505	PF02384	N-6 DNA Methylase
MSMAL_RS05515	PF18766	SWI2/SNF2 ATPase
MSMAL_RS05515	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS05515	PF12008	Type I restriction and modification enzyme - subunit R C terminal
MSMAL_RS05520	PF12728	Helix-turn-helix domain
MSMAL_RS05520	PF02661	Fic/DOC family
MSMAL_RS05560	PF01367	5'-3' exonuclease, C-terminal SAM fold
MSMAL_RS05560	PF00476	DNA polymerase family A
MSMAL_RS05560	PF01612	3'-5' exonuclease
MSMAL_RS05560	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
MSMAL_RS05615	PF03358	NADPH-dependent FMN reductase
MSMAL_RS05620	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS05620	PF17862	AAA+ lid domain
MSMAL_RS05620	PF01434	Peptidase family M41
MSMAL_RS05620	PF06480	FtsH Extracellular
MSMAL_RS05625	PF00571	CBS domain
MSMAL_RS05625	PF02272	DHHA1 domain
MSMAL_RS05625	PF01743	Poly A polymerase head domain
MSMAL_RS05625	PF01368	DHH family
MSMAL_RS05630	PF00266	Aminotransferase class-V
MSMAL_RS05640	PF00885	6,7-dimethyl-8-ribityllumazine synthase
MSMAL_RS05645	PF00155	Aminotransferase class I and II
MSMAL_RS05650	PF01467	Cytidylyltransferase-like
MSMAL_RS05650	PF00294	pfkB family carbohydrate kinase
MSMAL_RS05655	PF00478	IMP dehydrogenase / GMP reductase domain
MSMAL_RS05655	PF00571	CBS domain
MSMAL_RS05685	PF00924	Mechanosensitive ion channel
MSMAL_RS05685	PF05552	Conserved TM helix
MSMAL_RS05700	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
MSMAL_RS05700	PF01411	tRNA synthetases class II (A)
MSMAL_RS05700	PF02272	DHHA1 domain
MSMAL_RS05715	PF01699	Sodium/calcium exchanger protein
MSMAL_RS05745	PF03459	TOBE domain
MSMAL_RS05840	PF13298	DNA polymerase Ligase (LigD)
MSMAL_RS05840	PF01068	ATP dependent DNA ligase domain
MSMAL_RS05840	PF04679	ATP dependent DNA ligase C terminal region        
MSMAL_RS05860	PF17191	RecG wedge domain
MSMAL_RS05860	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
MSMAL_RS05860	PF00270	DEAD/DEAH box helicase
MSMAL_RS05875	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system
MSMAL_RS05905	PF01555	DNA methylase
MSMAL_RS05915	PF01555	DNA methylase
MSMAL_RS05915	PF18273	Type III R-M EcoP15I C-terminal domain
MSMAL_RS05925	PF00580	UvrD/REP helicase N-terminal domain
MSMAL_RS05925	PF13361	UvrD-like helicase C-terminal domain
MSMAL_RS05935	PF01934	Protein of unknown function DUF86
MSMAL_RS05960	PF01131	DNA topoisomerase
MSMAL_RS05960	PF01751	Toprim domain
MSMAL_RS05960	PF01396	Topoisomerase DNA binding C4 zinc finger
MSMAL_RS05965	PF01964	Radical SAM ThiC family
MSMAL_RS05995	PF01661	Macro domain
MSMAL_RS06010	PF02310	B12 binding domain
MSMAL_RS06010	PF02607	B12 binding domain
MSMAL_RS06050	PF00072	Response regulator receiver domain
MSMAL_RS06050	PF13426	PAS domain
MSMAL_RS06050	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS06065	PF12282	Signal transduction histidine kinase
MSMAL_RS06065	PF07568	Histidine kinase
MSMAL_RS06065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS06070	PF12282	Signal transduction histidine kinase
MSMAL_RS06070	PF07568	Histidine kinase
MSMAL_RS06070	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS06075	PF01545	Cation efflux family
MSMAL_RS06075	PF16916	Dimerisation domain of Zinc Transporter
MSMAL_RS06080	PF03435	Saccharopine dehydrogenase NADP binding domain
MSMAL_RS06080	PF16653	Saccharopine dehydrogenase C-terminal domain
MSMAL_RS06100	PF04343	Protein of unknown function, DUF488
MSMAL_RS06130	PF13361	UvrD-like helicase C-terminal domain
MSMAL_RS06130	PF00580	UvrD/REP helicase N-terminal domain
MSMAL_RS06180	PF10137	Predicted nucleotide-binding protein containing TIR-like domain
MSMAL_RS06210	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
MSMAL_RS06210	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
MSMAL_RS06215	PF02843	Phosphoribosylglycinamide synthetase, C domain
MSMAL_RS06215	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
MSMAL_RS06215	PF02844	Phosphoribosylglycinamide synthetase, N domain
MSMAL_RS06225	PF00156	Phosphoribosyl transferase domain
MSMAL_RS06240	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
MSMAL_RS06240	PF01578	Cytochrome C assembly protein
MSMAL_RS06290	PF16123	Hydroxyacylglutathione hydrolase C-terminus
MSMAL_RS06290	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS06335	PF05362	Lon protease (S16) C-terminal proteolytic domain
MSMAL_RS06335	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS06340	PF01523	Putative modulator of DNA gyrase
MSMAL_RS06345	PF01523	Putative modulator of DNA gyrase
MSMAL_RS06350	PF00582	Universal stress protein family
MSMAL_RS06360	PF00582	Universal stress protein family
MSMAL_RS06365	PF12800	4Fe-4S binding domain
MSMAL_RS06365	PF13247	4Fe-4S dicluster domain
MSMAL_RS06370	PF03063	Prismane/CO dehydrogenase family
MSMAL_RS06385	PF00117	Glutamine amidotransferase class-I
MSMAL_RS06385	PF06418	CTP synthase N-terminus
MSMAL_RS06410	PF01554	MatE
MSMAL_RS06415	PF01142	tRNA pseudouridine synthase D (TruD)
MSMAL_RS06440	PF01592	NifU-like N terminal domain
MSMAL_RS06445	PF00266	Aminotransferase class-V
MSMAL_RS06450	PF03788	LrgA family
MSMAL_RS06455	PF04172	LrgB-like family 
MSMAL_RS06495	PF02423	Ornithine cyclodeaminase/mu-crystallin family
MSMAL_RS06515	PF07685	CobB/CobQ-like glutamine amidotransferase domain
MSMAL_RS06525	PF12704	MacB-like periplasmic core domain
MSMAL_RS06525	PF02687	FtsX-like permease family
MSMAL_RS06545	PF02885	Glycosyl transferase family, helical bundle domain
MSMAL_RS06545	PF00591	Glycosyl transferase family, a/b domain
MSMAL_RS06545	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
MSMAL_RS06560	PF01202	Shikimate kinase
MSMAL_RS06570	PF05167	Uncharacterised ACR (DUF711)
MSMAL_RS06585	PF00156	Phosphoribosyl transferase domain
MSMAL_RS06590	PF00149	Calcineurin-like phosphoesterase
MSMAL_RS06610	PF00152	tRNA synthetases class II (D, K and N) 
MSMAL_RS06610	PF01336	OB-fold nucleic acid binding domain
MSMAL_RS06615	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
MSMAL_RS06620	PF00118	TCP-1/cpn60 chaperonin family
MSMAL_RS06630	PF01728	FtsJ-like methyltransferase
MSMAL_RS06635	PF01758	Sodium Bile acid symporter family
MSMAL_RS06645	PF00850	Histone deacetylase domain
MSMAL_RS06665	PF03551	Transcriptional regulator PadR-like family
MSMAL_RS06665	PF13847	Methyltransferase domain
MSMAL_RS06695	PF01593	Flavin containing amine oxidoreductase
MSMAL_RS06710	PF00582	Universal stress protein family
MSMAL_RS06725	PF02637	GatB domain
MSMAL_RS06725	PF02934	GatB/GatE catalytic domain
MSMAL_RS06730	PF00072	Response regulator receiver domain
MSMAL_RS06730	PF00158	Sigma-54 interaction domain
MSMAL_RS06730	PF02954	Bacterial regulatory protein, Fis family
MSMAL_RS06735	PF00171	Aldehyde dehydrogenase family
MSMAL_RS06740	PF00202	Aminotransferase class-III
MSMAL_RS06765	PF18496	Collagenase G catalytic helper subdomain
MSMAL_RS06765	PF01752	Collagenase
MSMAL_RS06765	PF08453	Peptidase family M9 N-terminal
MSMAL_RS06770	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
MSMAL_RS06775	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS06785	PF00117	Glutamine amidotransferase class-I
MSMAL_RS06785	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
MSMAL_RS06790	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
MSMAL_RS06790	PF02142	MGS-like domain
MSMAL_RS06790	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
MSMAL_RS06795	PF00764	Arginosuccinate synthase
MSMAL_RS06850	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system
MSMAL_RS06880	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS06900	PF13649	Methyltransferase domain
MSMAL_RS06905	PF01255	Putative undecaprenyl diphosphate synthase
MSMAL_RS06945	PF00005	ABC transporter
MSMAL_RS06950	PF00005	ABC transporter
MSMAL_RS06950	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS06955	PF12911	N-terminal TM domain of oligopeptide transport permease C
MSMAL_RS06955	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS06965	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
MSMAL_RS06970	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
MSMAL_RS07025	PF09620	CRISPR-associated protein (Cas_csx3)
MSMAL_RS07035	PF02810	SEC-C motif
MSMAL_RS07035	PF07517	SecA DEAD-like domain
MSMAL_RS07035	PF01043	SecA preprotein cross-linking domain
MSMAL_RS07035	PF07516	SecA Wing and Scaffold domain
MSMAL_RS07060	PF07728	AAA domain (dynein-related subfamily)
MSMAL_RS07060	PF17868	AAA lid domain
MSMAL_RS07060	PF12592	Protein of unknown function (DUF3763)
MSMAL_RS07070	PF00205	Thiamine pyrophosphate enzyme, central domain
MSMAL_RS07070	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
MSMAL_RS07070	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
MSMAL_RS07135	PF01925	Sulfite exporter TauE/SafE
MSMAL_RS07140	PF02687	FtsX-like permease family
MSMAL_RS07140	PF12704	MacB-like periplasmic core domain
MSMAL_RS07145	PF01047	MarR family
MSMAL_RS07165	PF01594	AI-2E family transporter
MSMAL_RS07170	PF00005	ABC transporter
MSMAL_RS07170	PF13732	Domain of unknown function (DUF4162)
MSMAL_RS07180	PF02254	TrkA-N domain
MSMAL_RS07180	PF07885	Ion channel
MSMAL_RS07245	PF00501	AMP-binding enzyme
MSMAL_RS07245	PF14535	AMP-binding enzyme C-terminal domain
MSMAL_RS07275	PF07995	Glucose / Sorbosone dehydrogenase
MSMAL_RS07295	PF00817	impB/mucB/samB family
MSMAL_RS07295	PF11799	impB/mucB/samB family C-terminal domain
MSMAL_RS07295	PF11798	IMS family HHH motif
MSMAL_RS07300	PF01594	AI-2E family transporter
MSMAL_RS07320	PF00072	Response regulator receiver domain
MSMAL_RS07325	PF00672	HAMP domain
MSMAL_RS07325	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
MSMAL_RS07325	PF00072	Response regulator receiver domain
MSMAL_RS07325	PF01627	Hpt domain
MSMAL_RS07325	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS07325	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS07350	PF13581	Histidine kinase-like ATPase domain
MSMAL_RS07350	PF07568	Histidine kinase
MSMAL_RS07350	PF13426	PAS domain
MSMAL_RS07360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS07360	PF00989	PAS fold
MSMAL_RS07360	PF00072	Response regulator receiver domain
MSMAL_RS07360	PF00497	Bacterial extracellular solute-binding proteins, family 3
MSMAL_RS07360	PF01627	Hpt domain
MSMAL_RS07360	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS07370	PF00633	Helix-hairpin-helix motif
MSMAL_RS07370	PF00730	HhH-GPD superfamily base excision DNA repair protein
MSMAL_RS07375	PF06146	Phosphate-starvation-inducible E
MSMAL_RS07380	PF12704	MacB-like periplasmic core domain
MSMAL_RS07380	PF02687	FtsX-like permease family
MSMAL_RS07380	PF00005	ABC transporter
MSMAL_RS07390	PF00005	ABC transporter
MSMAL_RS07405	PF05726	Pirin C-terminal cupin domain
MSMAL_RS07405	PF02678	Pirin
MSMAL_RS07440	PF05726	Pirin C-terminal cupin domain
MSMAL_RS07440	PF02678	Pirin
MSMAL_RS07455	PF13382	Adenine deaminase C-terminal domain
MSMAL_RS07455	PF01979	Amidohydrolase family
MSMAL_RS07465	PF05378	Hydantoinase/oxoprolinase N-terminal region
MSMAL_RS07465	PF01968	Hydantoinase/oxoprolinase
MSMAL_RS07485	PF01613	Flavin reductase like domain
MSMAL_RS07495	PF00248	Aldo/keto reductase family
MSMAL_RS07540	PF03631	Virulence factor BrkB
MSMAL_RS07595	PF00581	Rhodanese-like domain
MSMAL_RS07625	PF08453	Peptidase family M9 N-terminal
MSMAL_RS07625	PF01752	Collagenase
MSMAL_RS07625	PF18496	Collagenase G catalytic helper subdomain
MSMAL_RS07635	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS07635	PF06426	Serine acetyltransferase, N-terminal 
MSMAL_RS07650	PF12706	Beta-lactamase superfamily domain
MSMAL_RS07660	PF00483	Nucleotidyl transferase
MSMAL_RS07660	PF01050	Mannose-6-phosphate isomerase
MSMAL_RS07665	PF04041	beta-1,4-mannooligosaccharide phosphorylase
MSMAL_RS07730	PF03976	Polyphosphate kinase 2 (PPK2)
MSMAL_RS07735	PF00072	Response regulator receiver domain
MSMAL_RS07735	PF00486	Transcriptional regulatory protein, C terminal
MSMAL_RS07740	PF00072	Response regulator receiver domain
MSMAL_RS07740	PF00486	Transcriptional regulatory protein, C terminal
MSMAL_RS07745	PF07568	Histidine kinase
MSMAL_RS07745	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS07745	PF12282	Signal transduction histidine kinase
MSMAL_RS07780	PF02310	B12 binding domain
MSMAL_RS07780	PF02607	B12 binding domain
MSMAL_RS07800	PF12282	Signal transduction histidine kinase
MSMAL_RS07800	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS07800	PF07568	Histidine kinase
MSMAL_RS07815	PF08264	Anticodon-binding domain of tRNA
MSMAL_RS07815	PF00133	tRNA synthetases class I (I, L, M and V)
MSMAL_RS07835	PF13635	Domain of unknown function (DUF4143)
MSMAL_RS07835	PF13173	AAA domain
MSMAL_RS07865	PF01420	Type I restriction modification DNA specificity domain
MSMAL_RS07870	PF02384	N-6 DNA Methylase
MSMAL_RS07870	PF12161	HsdM N-terminal domain
MSMAL_RS07910	PF02384	N-6 DNA Methylase
MSMAL_RS07910	PF12161	HsdM N-terminal domain
MSMAL_RS07950	PF07728	AAA domain (dynein-related subfamily)
MSMAL_RS07950	PF08406	CbbQ/NirQ/NorQ C-terminal 
MSMAL_RS07960	PF12282	Signal transduction histidine kinase
MSMAL_RS07960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS07960	PF07568	Histidine kinase
MSMAL_RS07980	PF00300	Histidine phosphatase superfamily (branch 1)
MSMAL_RS08010	PF17191	RecG wedge domain
MSMAL_RS08010	PF00271	Helicase conserved C-terminal domain
MSMAL_RS08010	PF00270	DEAD/DEAH box helicase
MSMAL_RS08045	PF13673	Acetyltransferase (GNAT) domain
MSMAL_RS08060	PF00990	Diguanylate cyclase, GGDEF domain
MSMAL_RS08060	PF00072	Response regulator receiver domain
MSMAL_RS08065	PF06745	KaiC
MSMAL_RS08075	PF03091	CutA1 divalent ion tolerance protein
MSMAL_RS08095	PF12704	MacB-like periplasmic core domain
MSMAL_RS08095	PF00005	ABC transporter
MSMAL_RS08095	PF02687	FtsX-like permease family
MSMAL_RS08110	PF00005	ABC transporter
MSMAL_RS08115	PF02361	Cobalt transport protein
MSMAL_RS08135	PF00005	ABC transporter
MSMAL_RS08160	PF01436	NHL repeat
MSMAL_RS08160	PF00934	PE family
MSMAL_RS08220	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS08225	PF01750	Hydrogenase maturation protease
MSMAL_RS08230	PF00374	Nickel-dependent hydrogenase
MSMAL_RS08240	PF13439	Glycosyltransferase Family 4
MSMAL_RS08240	PF00534	Glycosyl transferases group 1
MSMAL_RS08260	PF13567	Domain of unknown function (DUF4131)
MSMAL_RS08260	PF03772	Competence protein
MSMAL_RS08260	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS08280	PF05683	Fumarase C-terminus
MSMAL_RS08280	PF05681	Fumarate hydratase (Fumerase)
MSMAL_RS08285	PF05683	Fumarase C-terminus
MSMAL_RS08295	PF00689	Cation transporting ATPase, C-terminus
MSMAL_RS08295	PF00690	Cation transporter/ATPase, N-terminus
MSMAL_RS08300	PF03976	Polyphosphate kinase 2 (PPK2)
MSMAL_RS08330	PF01131	DNA topoisomerase
MSMAL_RS08330	PF01396	Topoisomerase DNA binding C4 zinc finger
MSMAL_RS08330	PF01751	Toprim domain
MSMAL_RS08335	PF00582	Universal stress protein family
MSMAL_RS08340	PF17770	Ribonuclease J C-terminal domain
MSMAL_RS08340	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
MSMAL_RS08340	PF12706	Beta-lactamase superfamily domain
MSMAL_RS08380	PF01965	DJ-1/PfpI family
MSMAL_RS08385	PF01053	Cys/Met metabolism PLP-dependent enzyme
MSMAL_RS08390	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
MSMAL_RS08390	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
MSMAL_RS08400	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS08400	PF00101	Ribulose bisphosphate carboxylase, small chain
MSMAL_RS08445	PF00005	ABC transporter
MSMAL_RS08455	PF02687	FtsX-like permease family
MSMAL_RS08455	PF00005	ABC transporter
MSMAL_RS08455	PF12704	MacB-like periplasmic core domain
MSMAL_RS08465	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS08465	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS08500	PF02469	Fasciclin domain
MSMAL_RS08515	PF00343	Carbohydrate phosphorylase
MSMAL_RS08515	PF11897	Protein of unknown function (DUF3417)
MSMAL_RS08565	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
MSMAL_RS08565	PF05362	Lon protease (S16) C-terminal proteolytic domain
MSMAL_RS08565	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS08570	PF03358	NADPH-dependent FMN reductase
MSMAL_RS08580	PF07690	Major Facilitator Superfamily
MSMAL_RS08590	PF01810	LysE type translocator
MSMAL_RS08620	PF01569	PAP2 superfamily
MSMAL_RS08630	PF01554	MatE
MSMAL_RS08635	PF00294	pfkB family carbohydrate kinase
MSMAL_RS08650	PF01435	Peptidase family M48
MSMAL_RS08655	PF00005	ABC transporter
MSMAL_RS08660	PF01061	ABC-2 type transporter
MSMAL_RS08670	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
MSMAL_RS08675	PF01741	Large-conductance mechanosensitive channel, MscL
MSMAL_RS08685	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS08685	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS08685	PF00271	Helicase conserved C-terminal domain
MSMAL_RS08685	PF08463	EcoEI R protein C-terminal
MSMAL_RS08695	PF01420	Type I restriction modification DNA specificity domain
MSMAL_RS08720	PF02384	N-6 DNA Methylase
MSMAL_RS08720	PF12161	HsdM N-terminal domain
MSMAL_RS08780	PF07568	Histidine kinase
MSMAL_RS08780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS08780	PF12282	Signal transduction histidine kinase
MSMAL_RS08820	PF01758	Sodium Bile acid symporter family
MSMAL_RS08835	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS08870	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS08880	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS08890	PF01451	Low molecular weight phosphotyrosine protein phosphatase
MSMAL_RS08900	PF00582	Universal stress protein family
MSMAL_RS08910	PF01545	Cation efflux family
MSMAL_RS08910	PF16916	Dimerisation domain of Zinc Transporter
MSMAL_RS08915	PF01180	Dihydroorotate dehydrogenase
MSMAL_RS08925	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS08985	PF01758	Sodium Bile acid symporter family
MSMAL_RS09000	PF06953	Arsenical resistance operon trans-acting repressor ArsD
MSMAL_RS09005	PF02374	Anion-transporting ATPase
MSMAL_RS09010	PF00384	Molybdopterin oxidoreductase
MSMAL_RS09010	PF01568	Molydopterin dinucleotide binding domain
MSMAL_RS09010	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
MSMAL_RS09030	PF00534	Glycosyl transferases group 1
MSMAL_RS09030	PF13439	Glycosyltransferase Family 4
MSMAL_RS09065	PF00202	Aminotransferase class-III
MSMAL_RS09095	PF13361	UvrD-like helicase C-terminal domain
MSMAL_RS09095	PF00580	UvrD/REP helicase N-terminal domain
MSMAL_RS09135	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS09135	PF01938	TRAM domain
MSMAL_RS09175	PF13361	UvrD-like helicase C-terminal domain
MSMAL_RS09175	PF00580	UvrD/REP helicase N-terminal domain
MSMAL_RS09205	PF00589	Phage integrase family
MSMAL_RS09205	PF02899	Phage integrase, N-terminal SAM-like domain
MSMAL_RS09315	PF08453	Peptidase family M9 N-terminal
MSMAL_RS09315	PF01752	Collagenase
MSMAL_RS09325	PF00501	AMP-binding enzyme
MSMAL_RS09325	PF13193	AMP-binding enzyme C-terminal domain
MSMAL_RS09335	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
MSMAL_RS09335	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
MSMAL_RS09335	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
MSMAL_RS09350	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
MSMAL_RS09350	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
MSMAL_RS09355	PF13520	Amino acid permease
MSMAL_RS09360	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS09360	PF00258	Flavodoxin
MSMAL_RS09365	PF00120	Glutamine synthetase, catalytic domain
MSMAL_RS09365	PF03951	Glutamine synthetase, beta-Grasp domain
MSMAL_RS09370	PF00520	Ion transport protein
MSMAL_RS09370	PF00027	Cyclic nucleotide-binding domain
MSMAL_RS09395	PF01554	MatE
MSMAL_RS09400	PF01047	MarR family
MSMAL_RS09420	PF12146	Serine aminopeptidase, S33
MSMAL_RS09420	PF13026	Protein of unknown function (DUF3887)
MSMAL_RS09425	PF00892	EamA-like transporter family
MSMAL_RS09430	PF00117	Glutamine amidotransferase class-I
MSMAL_RS09435	PF09924	Uncharacterised conserved protein (DUF2156)
MSMAL_RS09435	PF03706	Lysylphosphatidylglycerol synthase TM region
MSMAL_RS09445	PF01554	MatE
MSMAL_RS09450	PF00989	PAS fold
MSMAL_RS09450	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS09450	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS09455	PF00072	Response regulator receiver domain
MSMAL_RS09460	PF16325	Peptidase family U32 C-terminal domain
MSMAL_RS09460	PF01136	Peptidase family U32
MSMAL_RS09465	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS09480	PF14010	Phosphoenolpyruvate carboxylase
MSMAL_RS09485	PF03063	Prismane/CO dehydrogenase family
MSMAL_RS09555	PF00106	short chain dehydrogenase
MSMAL_RS09575	PF01384	Phosphate transporter family
MSMAL_RS09590	PF02110	Hydroxyethylthiazole kinase family
MSMAL_RS09595	PF02581	Thiamine monophosphate synthase
MSMAL_RS09645	PF00486	Transcriptional regulatory protein, C terminal
MSMAL_RS09645	PF00931	NB-ARC domain
MSMAL_RS09645	PF03704	Bacterial transcriptional activator domain
MSMAL_RS09715	PF12794	Mechanosensitive ion channel inner membrane domain 1
MSMAL_RS09715	PF12795	Mechanosensitive ion channel porin domain
MSMAL_RS09715	PF00924	Mechanosensitive ion channel
MSMAL_RS09730	PF00924	Mechanosensitive ion channel
MSMAL_RS09730	PF05552	Conserved TM helix
MSMAL_RS09735	PF03591	AzlC protein
MSMAL_RS09745	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
MSMAL_RS09745	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
MSMAL_RS09785	PF07690	Major Facilitator Superfamily
MSMAL_RS09800	PF01595	Cyclin M transmembrane N-terminal domain
MSMAL_RS09800	PF03471	Transporter associated domain
MSMAL_RS09800	PF00571	CBS domain
MSMAL_RS09815	PF01940	Integral membrane protein DUF92
MSMAL_RS09820	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS09820	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
MSMAL_RS09825	PF07669	Eco57I restriction-modification methylase
MSMAL_RS09850	PF00149	Calcineurin-like phosphoesterase
MSMAL_RS09880	PF01613	Flavin reductase like domain
MSMAL_RS09885	PF00271	Helicase conserved C-terminal domain
MSMAL_RS09885	PF12344	Ultra-violet resistance protein B
MSMAL_RS09885	PF17757	UvrB interaction domain
MSMAL_RS09885	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS09885	PF02151	UvrB/uvrC motif
MSMAL_RS09890	PF08459	UvrC Helix-hairpin-helix N-terminal
MSMAL_RS09890	PF01541	GIY-YIG catalytic domain
MSMAL_RS09890	PF02151	UvrB/uvrC motif
MSMAL_RS09895	PF17755	UvrA DNA-binding domain
MSMAL_RS09895	PF17760	UvrA interaction domain
MSMAL_RS09915	PF07568	Histidine kinase
MSMAL_RS09915	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS09915	PF12282	Signal transduction histidine kinase
MSMAL_RS09930	PF01494	FAD binding domain
MSMAL_RS09950	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
MSMAL_RS09950	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
MSMAL_RS09950	PF03129	Anticodon binding domain
MSMAL_RS09950	PF02824	TGS domain
MSMAL_RS09955	PF00271	Helicase conserved C-terminal domain
MSMAL_RS09955	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS09980	PF01965	DJ-1/PfpI family
MSMAL_RS10005	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
MSMAL_RS10030	PF00293	NUDIX domain
MSMAL_RS10045	PF12911	N-terminal TM domain of oligopeptide transport permease C
MSMAL_RS10045	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS10050	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS10055	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
MSMAL_RS10060	PF00005	ABC transporter
MSMAL_RS10060	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS10065	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS10065	PF00005	ABC transporter
MSMAL_RS10070	PF00375	Sodium:dicarboxylate symporter family
MSMAL_RS10080	PF13247	4Fe-4S dicluster domain
MSMAL_RS10090	PF00117	Glutamine amidotransferase class-I
MSMAL_RS10105	PF03275	UDP-galactopyranose mutase
MSMAL_RS10120	PF02310	B12 binding domain
MSMAL_RS10120	PF02607	B12 binding domain
MSMAL_RS10175	PF00113	Enolase, C-terminal TIM barrel domain
MSMAL_RS10175	PF03952	Enolase, N-terminal domain
MSMAL_RS10195	PF00005	ABC transporter
MSMAL_RS10210	PF00317	Ribonucleotide reductase, all-alpha domain
MSMAL_RS10210	PF02867	Ribonucleotide reductase, barrel domain
MSMAL_RS10210	PF03477	ATP cone domain
MSMAL_RS10215	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
MSMAL_RS10235	PF04199	Putative cyclase
MSMAL_RS10240	PF00296	Luciferase-like monooxygenase
MSMAL_RS10245	PF00218	Indole-3-glycerol phosphate synthase
MSMAL_RS10250	PF00291	Pyridoxal-phosphate dependent enzyme
MSMAL_RS10255	PF00290	Tryptophan synthase alpha chain
MSMAL_RS10260	PF02885	Glycosyl transferase family, helical bundle domain
MSMAL_RS10260	PF00591	Glycosyl transferase family, a/b domain
MSMAL_RS10265	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
MSMAL_RS10270	PF00425	chorismate binding enzyme
MSMAL_RS10270	PF04715	Anthranilate synthase component I, N terminal region
MSMAL_RS10275	PF00591	Glycosyl transferase family, a/b domain
MSMAL_RS10275	PF02885	Glycosyl transferase family, helical bundle domain
MSMAL_RS10275	PF00117	Glutamine amidotransferase class-I
MSMAL_RS10290	PF01351	Ribonuclease HII
MSMAL_RS10300	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
MSMAL_RS10300	PF03484	tRNA synthetase B5 domain
MSMAL_RS10320	PF03781	Sulfatase-modifying factor enzyme 1
MSMAL_RS10340	PF00733	Asparagine synthase
MSMAL_RS10340	PF13537	Glutamine amidotransferase domain
MSMAL_RS10350	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS10385	PF02678	Pirin
MSMAL_RS10385	PF17954	Quercetinase C-terminal cupin domain
MSMAL_RS10390	PF09179	TilS substrate binding domain
MSMAL_RS10390	PF11734	TilS substrate C-terminal domain
MSMAL_RS10390	PF01171	PP-loop family
MSMAL_RS10405	PF12804	MobA-like NTP transferase domain
MSMAL_RS10410	PF02391	MoaE protein
MSMAL_RS10415	PF04002	RadC-like JAB domain
MSMAL_RS10445	PF00682	HMGL-like
MSMAL_RS10445	PF08502	LeuA allosteric (dimerisation) domain
MSMAL_RS10450	PF01513	ATP-NAD kinase
MSMAL_RS10455	PF00459	Inositol monophosphatase family
MSMAL_RS10460	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
MSMAL_RS10460	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MSMAL_RS10485	PF16916	Dimerisation domain of Zinc Transporter
MSMAL_RS10485	PF01545	Cation efflux family
MSMAL_RS10490	PF00708	Acylphosphatase
MSMAL_RS10525	PF04041	beta-1,4-mannooligosaccharide phosphorylase
MSMAL_RS10535	PF00465	Iron-containing alcohol dehydrogenase 
MSMAL_RS10545	PF01594	AI-2E family transporter
MSMAL_RS10560	PF01546	Peptidase family M20/M25/M40
MSMAL_RS10560	PF07687	Peptidase dimerisation domain
MSMAL_RS10565	PF12282	Signal transduction histidine kinase
MSMAL_RS10565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS10565	PF07568	Histidine kinase
MSMAL_RS10590	PF00293	NUDIX domain
MSMAL_RS10605	PF02384	N-6 DNA Methylase
MSMAL_RS10640	PF11867	Domain of unknown function (DUF3387)
MSMAL_RS10640	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS10640	PF18766	SWI2/SNF2 ATPase
MSMAL_RS10650	PF01914	MarC family integral membrane protein
MSMAL_RS10690	PF00391	PEP-utilising enzyme, mobile domain
MSMAL_RS10690	PF02896	PEP-utilising enzyme, TIM barrel domain
MSMAL_RS10690	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
MSMAL_RS10695	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
MSMAL_RS10715	PF01784	NIF3 (NGG1p interacting factor 3)
MSMAL_RS10730	PF01926	50S ribosome-binding GTPase
MSMAL_RS10735	PF01068	ATP dependent DNA ligase domain
MSMAL_RS10735	PF04675	DNA ligase N terminus
MSMAL_RS10735	PF04679	ATP dependent DNA ligase C terminal region        
MSMAL_RS10740	PF01842	ACT domain
MSMAL_RS10740	PF00742	Homoserine dehydrogenase
MSMAL_RS10740	PF03447	Homoserine dehydrogenase, NAD binding domain
MSMAL_RS10780	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS10780	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS10780	PF08463	EcoEI R protein C-terminal
MSMAL_RS10780	PF00271	Helicase conserved C-terminal domain
MSMAL_RS10785	PF02384	N-6 DNA Methylase
MSMAL_RS10785	PF12161	HsdM N-terminal domain
MSMAL_RS10790	PF01420	Type I restriction modification DNA specificity domain
MSMAL_RS10855	PF13173	AAA domain
MSMAL_RS10855	PF13635	Domain of unknown function (DUF4143)
MSMAL_RS10860	PF01695	IstB-like ATP binding protein
MSMAL_RS10865	PF02796	Helix-turn-helix domain of resolvase
MSMAL_RS10865	PF00665	Integrase core domain
MSMAL_RS10875	PF01593	Flavin containing amine oxidoreductase
MSMAL_RS10885	PF02310	B12 binding domain
MSMAL_RS10885	PF04055	Radical SAM superfamily
MSMAL_RS10915	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
MSMAL_RS10915	PF01348	Type II intron maturase
MSMAL_RS11000	PF17863	AAA lid domain
MSMAL_RS11000	PF07726	ATPase family associated with various cellular activities (AAA)
MSMAL_RS11010	PF00005	ABC transporter
MSMAL_RS11025	PF01235	Sodium:alanine symporter family
MSMAL_RS11035	PF01699	Sodium/calcium exchanger protein
MSMAL_RS11040	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS11045	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS11050	PF01402	Ribbon-helix-helix protein, copG family
MSMAL_RS11050	PF08753	NikR C terminal nickel binding domain
MSMAL_RS11055	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
MSMAL_RS11075	PF16325	Peptidase family U32 C-terminal domain
MSMAL_RS11075	PF01136	Peptidase family U32
MSMAL_RS11080	PF02289	Cyclohydrolase (MCH)
MSMAL_RS11095	PF00561	alpha/beta hydrolase fold
MSMAL_RS11100	PF00155	Aminotransferase class I and II
MSMAL_RS11110	PF07568	Histidine kinase
MSMAL_RS11110	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS11110	PF12282	Signal transduction histidine kinase
MSMAL_RS11115	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
MSMAL_RS11115	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
MSMAL_RS11130	PF05552	Conserved TM helix
MSMAL_RS11130	PF00924	Mechanosensitive ion channel
MSMAL_RS11150	PF01544	CorA-like Mg2+ transporter protein
MSMAL_RS11160	PF02469	Fasciclin domain
MSMAL_RS11165	PF00924	Mechanosensitive ion channel
MSMAL_RS11195	PF02525	Flavodoxin-like fold
MSMAL_RS11200	PF02525	Flavodoxin-like fold
MSMAL_RS11210	PF02687	FtsX-like permease family
MSMAL_RS11210	PF12704	MacB-like periplasmic core domain
MSMAL_RS11215	PF01641	SelR domain
MSMAL_RS11225	PF13419	Haloacid dehalogenase-like hydrolase
MSMAL_RS11230	PF04101	Glycosyltransferase family 28 C-terminal domain
MSMAL_RS11230	PF03033	Glycosyltransferase family 28 N-terminal domain
MSMAL_RS11240	PF00795	Carbon-nitrogen hydrolase
MSMAL_RS11240	PF00535	Glycosyl transferase family 2
MSMAL_RS11245	PF12464	Maltose acetyltransferase 
MSMAL_RS11245	PF14602	Hexapeptide repeat of succinyl-transferase
MSMAL_RS11245	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS11250	PF01522	Polysaccharide deacetylase
MSMAL_RS11290	PF02607	B12 binding domain
MSMAL_RS11290	PF02310	B12 binding domain
MSMAL_RS11325	PF00535	Glycosyl transferase family 2
MSMAL_RS11335	PF00355	Rieske [2Fe-2S] domain
MSMAL_RS11335	PF01266	FAD dependent oxidoreductase
MSMAL_RS11345	PF00672	HAMP domain
MSMAL_RS11345	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
MSMAL_RS11345	PF17200	Single Cache domain 2
MSMAL_RS11350	PF01769	Divalent cation transporter
MSMAL_RS11350	PF03448	MgtE intracellular N domain
MSMAL_RS11350	PF00571	CBS domain
MSMAL_RS11355	PF08463	EcoEI R protein C-terminal
MSMAL_RS11355	PF00271	Helicase conserved C-terminal domain
MSMAL_RS11355	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS11355	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS11365	PF01420	Type I restriction modification DNA specificity domain
MSMAL_RS11375	PF12161	HsdM N-terminal domain
MSMAL_RS11375	PF02384	N-6 DNA Methylase
MSMAL_RS11410	PF12464	Maltose acetyltransferase 
MSMAL_RS11410	PF14602	Hexapeptide repeat of succinyl-transferase
MSMAL_RS11410	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS11425	PF01168	Alanine racemase, N-terminal domain
MSMAL_RS11455	PF01888	CbiD
MSMAL_RS11460	PF01119	DNA mismatch repair protein, C-terminal domain
MSMAL_RS11460	PF08676	MutL C terminal dimerisation domain
MSMAL_RS11465	PF01624	MutS domain I
MSMAL_RS11465	PF05188	MutS domain II
MSMAL_RS11465	PF05192	MutS domain III
MSMAL_RS11465	PF05190	MutS family domain IV
MSMAL_RS11465	PF00488	MutS domain V
MSMAL_RS11485	PF01066	CDP-alcohol phosphatidyltransferase
MSMAL_RS11500	PF02310	B12 binding domain
MSMAL_RS11500	PF02607	B12 binding domain
MSMAL_RS11505	PF06253	Trimethylamine methyltransferase (MTTB)
MSMAL_RS11510	PF06253	Trimethylamine methyltransferase (MTTB)
MSMAL_RS11515	PF02310	B12 binding domain
MSMAL_RS11515	PF02607	B12 binding domain
MSMAL_RS11545	PF01921	tRNA synthetases class I (K)
MSMAL_RS11560	PF05014	Nucleoside 2-deoxyribosyltransferase
MSMAL_RS11565	PF01136	Peptidase family U32
MSMAL_RS11565	PF12392	Collagenase 
MSMAL_RS11590	PF00977	Histidine biosynthesis protein
MSMAL_RS11595	PF02577	Bifunctional nuclease
MSMAL_RS11620	PF00925	GTP cyclohydrolase II
MSMAL_RS11620	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
MSMAL_RS11625	PF01545	Cation efflux family
MSMAL_RS11625	PF16916	Dimerisation domain of Zinc Transporter
MSMAL_RS11630	PF01264	Chorismate synthase
MSMAL_RS11695	PF00089	Trypsin
MSMAL_RS11715	PF04055	Radical SAM superfamily
MSMAL_RS11715	PF13186	Iron-sulfur cluster-binding domain
MSMAL_RS11725	PF17805	AsnC-like ligand binding domain
MSMAL_RS11730	PF10414	Sirohaem synthase dimerisation region
MSMAL_RS11730	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
MSMAL_RS11735	PF01488	Shikimate / quinate 5-dehydrogenase
MSMAL_RS11735	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
MSMAL_RS11735	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
MSMAL_RS11740	PF00490	Delta-aminolevulinic acid dehydratase
MSMAL_RS11745	PF00202	Aminotransferase class-III
MSMAL_RS11750	PF03900	Porphobilinogen deaminase, C-terminal domain
MSMAL_RS11750	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
MSMAL_RS11755	PF01180	Dihydroorotate dehydrogenase
MSMAL_RS11760	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
MSMAL_RS11760	PF00970	Oxidoreductase FAD-binding domain
MSMAL_RS11765	PF01557	Fumarylacetoacetate (FAA) hydrolase family
MSMAL_RS11775	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
MSMAL_RS11775	PF00749	tRNA synthetases class I (E and Q), catalytic domain
MSMAL_RS11795	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
MSMAL_RS11795	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
MSMAL_RS11795	PF01842	ACT domain
MSMAL_RS11810	PF00572	Ribosomal protein L13
MSMAL_RS11815	PF00380	Ribosomal protein S9/S16
MSMAL_RS11835	PF00318	Ribosomal protein S2
MSMAL_RS11840	PF01875	Memo-like protein
MSMAL_RS11845	PF00288	GHMP kinases N terminal domain
MSMAL_RS11845	PF08544	GHMP kinases C terminal 
MSMAL_RS11845	PF10509	Galactokinase galactose-binding signature
MSMAL_RS11855	PF01070	FMN-dependent dehydrogenase
MSMAL_RS11865	PF00753	Metallo-beta-lactamase superfamily
MSMAL_RS11865	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
MSMAL_RS11865	PF17770	Ribonuclease J C-terminal domain
MSMAL_RS11870	PF00348	Polyprenyl synthetase
MSMAL_RS11890	PF00391	PEP-utilising enzyme, mobile domain
MSMAL_RS11890	PF02896	PEP-utilising enzyme, TIM barrel domain
MSMAL_RS11890	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
MSMAL_RS11915	PF01938	TRAM domain
MSMAL_RS11915	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS11930	PF07568	Histidine kinase
MSMAL_RS11930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS11930	PF12282	Signal transduction histidine kinase
MSMAL_RS11935	PF01545	Cation efflux family
MSMAL_RS11935	PF16916	Dimerisation domain of Zinc Transporter
MSMAL_RS11940	PF01738	Dienelactone hydrolase family
MSMAL_RS11940	PF00156	Phosphoribosyl transferase domain
MSMAL_RS11945	PF05139	Erythromycin esterase
MSMAL_RS11945	PF00156	Phosphoribosyl transferase domain
MSMAL_RS11955	PF12282	Signal transduction histidine kinase
MSMAL_RS11955	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS11955	PF07568	Histidine kinase
MSMAL_RS12025	PF04015	Domain of unknown function (DUF362) 
MSMAL_RS12035	PF00166	Chaperonin 10 Kd subunit
MSMAL_RS12040	PF00118	TCP-1/cpn60 chaperonin family
MSMAL_RS12060	PF00155	Aminotransferase class I and II
MSMAL_RS12075	PF02915	Rubrerythrin
MSMAL_RS12095	PF00013	KH domain
MSMAL_RS12095	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS12095	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS12095	PF03725	3' exoribonuclease family, domain 2
MSMAL_RS12095	PF00575	S1 RNA binding domain
MSMAL_RS12120	PF03781	Sulfatase-modifying factor enzyme 1
MSMAL_RS12125	PF05670	NFACT protein RNA binding domain
MSMAL_RS12165	PF02834	LigT like Phosphoesterase
MSMAL_RS12170	PF17864	RuvB AAA lid domain
MSMAL_RS12170	PF05491	RuvB C-terminal winged helix domain
MSMAL_RS12170	PF05496	Holliday junction DNA helicase RuvB P-loop domain
MSMAL_RS12195	PF00364	Biotin-requiring enzyme
MSMAL_RS12195	PF00682	HMGL-like
MSMAL_RS12195	PF02436	Conserved carboxylase domain
MSMAL_RS12200	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
MSMAL_RS12200	PF00289	Biotin carboxylase, N-terminal domain
MSMAL_RS12200	PF02785	Biotin carboxylase C-terminal domain
MSMAL_RS12205	PF08279	HTH domain
MSMAL_RS12205	PF03099	Biotin/lipoate A/B protein ligase family
MSMAL_RS12205	PF02237	Biotin protein ligase C terminal domain
MSMAL_RS12240	PF00588	SpoU rRNA Methylase family
MSMAL_RS12255	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
MSMAL_RS12255	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
MSMAL_RS12265	PF02754	Cysteine-rich domain
MSMAL_RS12265	PF13183	4Fe-4S dicluster domain
MSMAL_RS12265	PF02665	Nitrate reductase gamma subunit
MSMAL_RS12320	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS12320	PF00005	ABC transporter
MSMAL_RS12325	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS12325	PF00005	ABC transporter
MSMAL_RS12330	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS12330	PF12911	N-terminal TM domain of oligopeptide transport permease C
MSMAL_RS12335	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS12340	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
MSMAL_RS12395	PF02441	Flavoprotein
MSMAL_RS12405	PF01966	HD domain
MSMAL_RS12410	PF01933	Uncharacterised protein family UPF0052
MSMAL_RS12430	PF00156	Phosphoribosyl transferase domain
MSMAL_RS12445	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS12445	PF00575	S1 RNA binding domain
MSMAL_RS12445	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS12445	PF00013	KH domain
MSMAL_RS12445	PF03725	3' exoribonuclease family, domain 2
MSMAL_RS12470	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
MSMAL_RS12470	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
MSMAL_RS12490	PF00924	Mechanosensitive ion channel
MSMAL_RS12500	PF00884	Sulfatase
MSMAL_RS12500	PF16385	Domain of unknown function
MSMAL_RS12505	PF04055	Radical SAM superfamily
MSMAL_RS12505	PF13186	Iron-sulfur cluster-binding domain
MSMAL_RS12510	PF02811	PHP domain
MSMAL_RS12510	PF14716	Helix-hairpin-helix domain
MSMAL_RS12510	PF14791	DNA polymerase beta thumb 
MSMAL_RS12515	PF04679	ATP dependent DNA ligase C terminal region        
MSMAL_RS12515	PF01068	ATP dependent DNA ligase domain
MSMAL_RS12515	PF04675	DNA ligase N terminus
MSMAL_RS12565	PF00581	Rhodanese-like domain
MSMAL_RS12585	PF02254	TrkA-N domain
MSMAL_RS12585	PF00999	Sodium/hydrogen exchanger family
MSMAL_RS12590	PF02545	Maf-like protein
MSMAL_RS12595	PF01406	tRNA synthetases class I (C) catalytic domain
MSMAL_RS12595	PF09190	DALR domain
MSMAL_RS12615	PF07568	Histidine kinase
MSMAL_RS12615	PF12282	Signal transduction histidine kinase
MSMAL_RS12615	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS12620	PF01336	OB-fold nucleic acid binding domain
MSMAL_RS12620	PF00152	tRNA synthetases class II (D, K and N) 
MSMAL_RS12625	PF08494	DEAD/H associated
MSMAL_RS12625	PF00270	DEAD/DEAH box helicase
MSMAL_RS12625	PF00271	Helicase conserved C-terminal domain
MSMAL_RS12655	PF06803	Protein of unknown function (DUF1232)
MSMAL_RS12675	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS12690	PF17203	Single cache domain 3
MSMAL_RS12690	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS12695	PF01208	Uroporphyrinogen decarboxylase (URO-D)
MSMAL_RS12700	PF00892	EamA-like transporter family
MSMAL_RS12725	PF01205	Uncharacterized protein family UPF0029
MSMAL_RS12725	PF09186	Domain of unknown function (DUF1949)
MSMAL_RS12735	PF00497	Bacterial extracellular solute-binding proteins, family 3
MSMAL_RS12745	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS12750	PF00005	ABC transporter
MSMAL_RS12755	PF01040	UbiA prenyltransferase family
MSMAL_RS12775	PF00534	Glycosyl transferases group 1
MSMAL_RS12785	PF00248	Aldo/keto reductase family
MSMAL_RS12790	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS12795	PF18011	C-terminal domain found in long catalases
MSMAL_RS12795	PF06628	Catalase-related immune-responsive
MSMAL_RS12795	PF00199	Catalase
MSMAL_RS12805	PF01545	Cation efflux family
MSMAL_RS12805	PF16916	Dimerisation domain of Zinc Transporter
MSMAL_RS12810	PF01592	NifU-like N terminal domain
MSMAL_RS12815	PF00266	Aminotransferase class-V
MSMAL_RS12820	PF13686	DsrE/DsrF/DrsH-like family
MSMAL_RS12825	PF01206	Sulfurtransferase TusA
MSMAL_RS12830	PF01230	HIT domain
MSMAL_RS12835	PF04193	PQ loop repeat 
MSMAL_RS12855	PF01479	S4 domain
MSMAL_RS12855	PF00579	tRNA synthetases class I (W and Y)
MSMAL_RS12870	PF00056	lactate/malate dehydrogenase, NAD binding domain
MSMAL_RS12870	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
MSMAL_RS12905	PF16199	Radical_SAM C-terminal domain
MSMAL_RS12905	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS12905	PF04055	Radical SAM superfamily
MSMAL_RS12930	PF07969	Amidohydrolase family
MSMAL_RS12935	PF01568	Molydopterin dinucleotide binding domain
MSMAL_RS12935	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
MSMAL_RS12935	PF00384	Molybdopterin oxidoreductase
MSMAL_RS12955	PF01752	Collagenase
MSMAL_RS12955	PF08453	Peptidase family M9 N-terminal
MSMAL_RS12970	PF01895	PhoU domain
MSMAL_RS13000	PF13732	Domain of unknown function (DUF4162)
MSMAL_RS13000	PF00005	ABC transporter
MSMAL_RS13005	PF02361	Cobalt transport protein
MSMAL_RS13010	PF00005	ABC transporter
MSMAL_RS13020	PF02514	CobN/Magnesium Chelatase
MSMAL_RS13045	PF17863	AAA lid domain
MSMAL_RS13045	PF13519	von Willebrand factor type A domain
MSMAL_RS13045	PF07728	AAA domain (dynein-related subfamily)
MSMAL_RS13050	PF03104	DNA polymerase family B, exonuclease domain
MSMAL_RS13050	PF00136	DNA polymerase family B
MSMAL_RS13055	PF12849	PBP superfamily domain
MSMAL_RS13060	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS13065	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS13070	PF00005	ABC transporter
MSMAL_RS13075	PF01895	PhoU domain
MSMAL_RS13080	PF01979	Amidohydrolase family
MSMAL_RS13085	PF00013	KH domain
MSMAL_RS13085	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS13085	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS13085	PF00575	S1 RNA binding domain
MSMAL_RS13120	PF01521	Iron-sulphur cluster biosynthesis
MSMAL_RS13135	PF01502	Phosphoribosyl-AMP cyclohydrolase
MSMAL_RS13140	PF00004	ATPase family associated with various cellular activities (AAA)
MSMAL_RS13140	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
MSMAL_RS13140	PF05362	Lon protease (S16) C-terminal proteolytic domain
MSMAL_RS13180	PF00117	Glutamine amidotransferase class-I
MSMAL_RS13185	PF00586	AIR synthase related protein, N-terminal domain
MSMAL_RS13185	PF02769	AIR synthase related protein, C-terminal domain
MSMAL_RS13185	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
MSMAL_RS13195	PF01145	SPFH domain / Band 7 family
MSMAL_RS13200	PF03725	3' exoribonuclease family, domain 2
MSMAL_RS13200	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS13200	PF00575	S1 RNA binding domain
MSMAL_RS13200	PF00013	KH domain
MSMAL_RS13200	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS13205	PF00156	Phosphoribosyl transferase domain
MSMAL_RS13230	PF01037	Lrp/AsnC ligand binding domain
MSMAL_RS13235	PF00155	Aminotransferase class I and II
MSMAL_RS13275	PF02310	B12 binding domain
MSMAL_RS13275	PF02607	B12 binding domain
MSMAL_RS13280	PF06253	Trimethylamine methyltransferase (MTTB)
MSMAL_RS13295	PF06253	Trimethylamine methyltransferase (MTTB)
MSMAL_RS13310	PF02310	B12 binding domain
MSMAL_RS13310	PF02607	B12 binding domain
MSMAL_RS13320	PF14528	LAGLIDADG-like domain
MSMAL_RS13320	PF01458	Uncharacterized protein family (UPF0051)
MSMAL_RS13325	PF00005	ABC transporter
MSMAL_RS13330	PF00483	Nucleotidyl transferase
MSMAL_RS13330	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS13335	PF02654	Cobalamin-5-phosphate synthase
MSMAL_RS13345	PF03186	CobD/Cbib protein
MSMAL_RS13350	PF00155	Aminotransferase class I and II
MSMAL_RS13355	PF03129	Anticodon binding domain
MSMAL_RS13355	PF13393	Histidyl-tRNA synthetase
MSMAL_RS13385	PF00005	ABC transporter
MSMAL_RS13390	PF01032	FecCD transport family
MSMAL_RS13400	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
MSMAL_RS13400	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
MSMAL_RS13405	PF01958	Domain of unknown function DUF108
MSMAL_RS13405	PF03447	Homoserine dehydrogenase, NAD binding domain
MSMAL_RS13410	PF02445	Quinolinate synthetase A protein
MSMAL_RS13420	PF01040	UbiA prenyltransferase family
MSMAL_RS13430	PF01941	S-adenosylmethionine synthetase (AdoMet synthetase)
MSMAL_RS13440	PF08745	PINc domain ribonuclease
MSMAL_RS13455	PF03649	Uncharacterised protein family (UPF0014)
MSMAL_RS13460	PF00664	ABC transporter transmembrane region
MSMAL_RS13460	PF00005	ABC transporter
MSMAL_RS13465	PF01916	Deoxyhypusine synthase
MSMAL_RS13470	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
MSMAL_RS13475	PF03599	CO dehydrogenase/acetyl-CoA synthase delta subunit
MSMAL_RS13475	PF04060	Putative Fe-S cluster
MSMAL_RS13480	PF03599	CO dehydrogenase/acetyl-CoA synthase delta subunit
MSMAL_RS13485	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS13490	PF03598	CO dehydrogenase/acetyl-CoA synthase complex beta subunit
MSMAL_RS13490	PF18537	Carbon monoxide dehydrogenase subunit alpha N-terminal domain
MSMAL_RS13505	PF02001	Protein of unknown function  DUF134
MSMAL_RS13515	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS13540	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
MSMAL_RS13540	PF00953	Glycosyl transferase family 4
MSMAL_RS13560	PF13439	Glycosyltransferase Family 4
MSMAL_RS13575	PF08323	Starch synthase catalytic domain
MSMAL_RS13575	PF00534	Glycosyl transferases group 1
MSMAL_RS13590	PF02388	FemAB family
MSMAL_RS13635	PF01435	Peptidase family M48
MSMAL_RS13675	PF00297	Ribosomal protein L3
MSMAL_RS13680	PF00573	Ribosomal protein L4/L1 family
MSMAL_RS13685	PF00276	Ribosomal protein L23
MSMAL_RS13690	PF03947	Ribosomal Proteins L2, C-terminal domain
MSMAL_RS13690	PF00181	Ribosomal Proteins L2, RNA binding domain
MSMAL_RS13695	PF00203	Ribosomal protein S19
MSMAL_RS13705	PF00189	Ribosomal protein S3, C-terminal domain
MSMAL_RS13705	PF07650	KH domain
MSMAL_RS13710	PF00831	Ribosomal L29 protein
MSMAL_RS13720	PF00366	Ribosomal protein S17
MSMAL_RS13725	PF00238	Ribosomal protein L14p/L23e
MSMAL_RS13730	PF00467	KOW motif
MSMAL_RS13730	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
MSMAL_RS13740	PF00281	Ribosomal protein L5
MSMAL_RS13740	PF00673	ribosomal L5P family C-terminus
MSMAL_RS13750	PF00410	Ribosomal protein S8
MSMAL_RS13755	PF00347	Ribosomal protein L6
MSMAL_RS13775	PF03719	Ribosomal protein S5, C-terminal domain
MSMAL_RS13775	PF00333	Ribosomal protein S5, N-terminal domain
MSMAL_RS13785	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
MSMAL_RS13790	PF00344	SecY translocase
MSMAL_RS13795	PF05191	Adenylate kinase, active site lid
MSMAL_RS13800	PF00731	AIR carboxylase
MSMAL_RS13810	PF12804	MobA-like NTP transferase domain
MSMAL_RS13810	PF14602	Hexapeptide repeat of succinyl-transferase
MSMAL_RS13810	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS13825	PF01509	TruB family pseudouridylate synthase (N terminal domain)
MSMAL_RS13825	PF16198	tRNA pseudouridylate synthase B C-terminal domain
MSMAL_RS13835	PF00416	Ribosomal protein S13/S18
MSMAL_RS13840	PF01479	S4 domain
MSMAL_RS13840	PF00163	Ribosomal protein S4/S9 N-terminal domain
MSMAL_RS13845	PF00411	Ribosomal protein S11
MSMAL_RS13865	PF10282	Lactonase, 7-bladed beta-propeller
MSMAL_RS13875	PF00132	Bacterial transferase hexapeptide (six repeats)
MSMAL_RS13885	PF02492	CobW/HypB/UreG, nucleotide-binding domain
MSMAL_RS13900	PF01455	HupF/HypC family
MSMAL_RS13915	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS13915	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
MSMAL_RS13920	PF00374	Nickel-dependent hydrogenase
MSMAL_RS13945	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS13945	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
MSMAL_RS13945	PF10518	TAT (twin-arginine translocation) pathway signal sequence
MSMAL_RS13950	PF00374	Nickel-dependent hydrogenase
MSMAL_RS13960	PF00989	PAS fold
MSMAL_RS13960	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS13960	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS13970	PF00117	Glutamine amidotransferase class-I
MSMAL_RS13970	PF02540	NAD synthase
MSMAL_RS13970	PF00958	GMP synthase C terminal domain
MSMAL_RS13975	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
MSMAL_RS13980	PF00919	Uncharacterized protein family UPF0004
MSMAL_RS13980	PF04055	Radical SAM superfamily
MSMAL_RS13980	PF18693	TRAM domain
MSMAL_RS14005	PF02915	Rubrerythrin
MSMAL_RS14025	PF08774	VRR-NUC domain
MSMAL_RS14025	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS14035	PF01555	DNA methylase
MSMAL_RS14035	PF18273	Type III R-M EcoP15I C-terminal domain
MSMAL_RS14040	PF00149	Calcineurin-like phosphoesterase
MSMAL_RS14040	PF12320	Type 5 capsule protein repressor C-terminal domain
MSMAL_RS14045	PF02463	RecF/RecN/SMC N terminal domain
MSMAL_RS14045	PF06470	SMC proteins Flexible Hinge Domain
MSMAL_RS14050	PF00296	Luciferase-like monooxygenase
MSMAL_RS14065	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
MSMAL_RS14065	PF14572	Phosphoribosyl synthetase-associated domain
MSMAL_RS14070	PF01967	MoaC family
MSMAL_RS14080	PF01256	Carbohydrate kinase
MSMAL_RS14080	PF03853	YjeF-related protein N-terminus
MSMAL_RS14120	PF00005	ABC transporter
MSMAL_RS14130	PF00483	Nucleotidyl transferase
MSMAL_RS14135	PF00535	Glycosyl transferase family 2
MSMAL_RS14140	PF00534	Glycosyl transferases group 1
MSMAL_RS14140	PF13439	Glycosyltransferase Family 4
MSMAL_RS14145	PF08241	Methyltransferase domain
MSMAL_RS14155	PF00535	Glycosyl transferase family 2
MSMAL_RS14185	PF02683	Cytochrome C biogenesis protein transmembrane region
MSMAL_RS14195	PF13847	Methyltransferase domain
MSMAL_RS14200	PF01451	Low molecular weight phosphotyrosine protein phosphatase
MSMAL_RS14210	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS14220	PF01022	Bacterial regulatory protein, arsR family
MSMAL_RS14225	PF03773	Predicted permease
MSMAL_RS14300	PF00338	Ribosomal protein S10p/S20e
MSMAL_RS14305	PF03144	Elongation factor Tu domain 2
MSMAL_RS14305	PF00009	Elongation factor Tu GTP binding domain
MSMAL_RS14305	PF03143	Elongation factor Tu C-terminal domain
MSMAL_RS14310	PF03144	Elongation factor Tu domain 2
MSMAL_RS14310	PF00009	Elongation factor Tu GTP binding domain
MSMAL_RS14310	PF03764	Elongation factor G, domain IV
MSMAL_RS14310	PF00679	Elongation factor G C-terminus
MSMAL_RS14310	PF14492	Elongation Factor G, domain II
MSMAL_RS14315	PF00177	Ribosomal protein S7p/S5e
MSMAL_RS14335	PF04997	RNA polymerase Rpb1, domain 1
MSMAL_RS14335	PF04983	RNA polymerase Rpb1, domain 3
MSMAL_RS14335	PF05000	RNA polymerase Rpb1, domain 4
MSMAL_RS14335	PF00623	RNA polymerase Rpb1, domain 2
MSMAL_RS14335	PF04998	RNA polymerase Rpb1, domain 5
MSMAL_RS14340	PF05000	RNA polymerase Rpb1, domain 4
MSMAL_RS14340	PF04983	RNA polymerase Rpb1, domain 3
MSMAL_RS14340	PF00623	RNA polymerase Rpb1, domain 2
MSMAL_RS14340	PF04997	RNA polymerase Rpb1, domain 1
MSMAL_RS14340	PF04998	RNA polymerase Rpb1, domain 5
MSMAL_RS14345	PF10385	RNA polymerase beta subunit external 1 domain
MSMAL_RS14345	PF00562	RNA polymerase Rpb2, domain 6
MSMAL_RS14345	PF04565	RNA polymerase Rpb2, domain 3
MSMAL_RS14345	PF04561	RNA polymerase Rpb2, domain 2
MSMAL_RS14345	PF04563	RNA polymerase beta subunit
MSMAL_RS14345	PF04560	RNA polymerase Rpb2, domain 7
MSMAL_RS14350	PF04565	RNA polymerase Rpb2, domain 3
MSMAL_RS14350	PF04563	RNA polymerase beta subunit
MSMAL_RS14350	PF10385	RNA polymerase beta subunit external 1 domain
MSMAL_RS14350	PF00562	RNA polymerase Rpb2, domain 6
MSMAL_RS14350	PF04560	RNA polymerase Rpb2, domain 7
MSMAL_RS14350	PF04561	RNA polymerase Rpb2, domain 2
MSMAL_RS14365	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS14365	PF12282	Signal transduction histidine kinase
MSMAL_RS14365	PF07568	Histidine kinase
MSMAL_RS14400	PF05221	S-adenosyl-L-homocysteine hydrolase
MSMAL_RS14400	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
MSMAL_RS14405	PF01979	Amidohydrolase family
MSMAL_RS14410	PF01966	HD domain
MSMAL_RS14425	PF04127	DNA / pantothenate metabolism flavoprotein
MSMAL_RS14425	PF02441	Flavoprotein
MSMAL_RS14445	PF01728	FtsJ-like methyltransferase
MSMAL_RS14450	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
MSMAL_RS14450	PF14579	Helix-hairpin-helix motif
MSMAL_RS14450	PF02811	PHP domain
MSMAL_RS14450	PF07733	Bacterial DNA polymerase III alpha NTPase domain
MSMAL_RS14480	PF00437	Type II/IV secretion system protein
MSMAL_RS14500	PF09861	Lactate racemase N-terminal domain
MSMAL_RS14505	PF09861	Lactate racemase N-terminal domain
MSMAL_RS14510	PF00474	Sodium:solute symporter family
MSMAL_RS14515	PF00710	Asparaginase, N-terminal
MSMAL_RS14515	PF17763	Glutaminase/Asparaginase C-terminal domain
MSMAL_RS14520	PF00206	Lyase
MSMAL_RS14520	PF14698	Argininosuccinate lyase C-terminal
MSMAL_RS14525	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS14535	PF03109	ABC1 family
MSMAL_RS14550	PF00374	Nickel-dependent hydrogenase
MSMAL_RS14555	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
MSMAL_RS14555	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS14560	PF01455	HupF/HypC family
MSMAL_RS14565	PF01924	Hydrogenase formation hypA family
MSMAL_RS14570	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
MSMAL_RS14575	PF02492	CobW/HypB/UreG, nucleotide-binding domain
MSMAL_RS14580	PF02769	AIR synthase related protein, C-terminal domain
MSMAL_RS14580	PF00586	AIR synthase related protein, N-terminal domain
MSMAL_RS14585	PF13244	Domain of unknown function (DUF4040)
MSMAL_RS14585	PF00361	Proton-conducting membrane transporter
MSMAL_RS14585	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
MSMAL_RS14590	PF00146	NADH dehydrogenase
MSMAL_RS14595	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS14605	PF00374	Nickel-dependent hydrogenase
MSMAL_RS14605	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
MSMAL_RS14610	PF11953	Domain of unknown function (DUF3470)
MSMAL_RS14610	PF00037	4Fe-4S binding domain
MSMAL_RS14620	PF00403	Heavy-metal-associated domain
MSMAL_RS14630	PF00403	Heavy-metal-associated domain
MSMAL_RS14640	PF09962	Uncharacterized conserved protein (DUF2196)
MSMAL_RS14645	PF07690	Major Facilitator Superfamily
MSMAL_RS14650	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS14655	PF00893	Small Multidrug Resistance protein
MSMAL_RS14690	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
MSMAL_RS14690	PF00205	Thiamine pyrophosphate enzyme, central domain
MSMAL_RS14690	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
MSMAL_RS14695	PF00171	Aldehyde dehydrogenase family
MSMAL_RS14725	PF08443	RimK-like ATP-grasp domain
MSMAL_RS14725	PF18030	RimK PreATP-grasp domain
MSMAL_RS14735	PF13419	Haloacid dehalogenase-like hydrolase
MSMAL_RS14745	PF00072	Response regulator receiver domain
MSMAL_RS14745	PF00486	Transcriptional regulatory protein, C terminal
MSMAL_RS14755	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS14785	PF00294	pfkB family carbohydrate kinase
MSMAL_RS14795	PF00731	AIR carboxylase
MSMAL_RS14815	PF00009	Elongation factor Tu GTP binding domain
MSMAL_RS14815	PF03144	Elongation factor Tu domain 2
MSMAL_RS14815	PF06421	GTP-binding protein LepA C-terminus
MSMAL_RS14815	PF00679	Elongation factor G C-terminus
MSMAL_RS14830	PF01380	SIS domain
MSMAL_RS14835	PF00155	Aminotransferase class I and II
MSMAL_RS14845	PF09269	Domain of unknown function (DUF1967)
MSMAL_RS14845	PF01018	GTP1/OBG
MSMAL_RS14845	PF01926	50S ribosome-binding GTPase
MSMAL_RS14855	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
MSMAL_RS14855	PF01502	Phosphoribosyl-AMP cyclohydrolase
MSMAL_RS14860	PF00330	Aconitase family (aconitate hydratase)
MSMAL_RS14890	PF01048	Phosphorylase superfamily
MSMAL_RS14940	PF00005	ABC transporter
MSMAL_RS14945	PF02361	Cobalt transport protein
MSMAL_RS14960	PF00501	AMP-binding enzyme
MSMAL_RS14960	PF13193	AMP-binding enzyme C-terminal domain
MSMAL_RS14970	PF01381	Helix-turn-helix
MSMAL_RS14970	PF07883	Cupin domain
MSMAL_RS14975	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
MSMAL_RS14975	PF07992	Pyridine nucleotide-disulphide oxidoreductase
MSMAL_RS14980	PF01578	Cytochrome C assembly protein
MSMAL_RS14985	PF03379	CcmB protein
MSMAL_RS14990	PF00005	ABC transporter
MSMAL_RS14995	PF01625	Peptide methionine sulfoxide reductase
MSMAL_RS15000	PF01161	Phosphatidylethanolamine-binding protein
MSMAL_RS15090	PF00986	DNA gyrase B subunit, carboxyl terminus
MSMAL_RS15090	PF00204	DNA gyrase B
MSMAL_RS15090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS15090	PF01751	Toprim domain
MSMAL_RS15095	PF00521	DNA gyrase/topoisomerase IV, subunit A
MSMAL_RS15095	PF03989	DNA gyrase C-terminal domain, beta-propeller
MSMAL_RS15110	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
MSMAL_RS15110	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
MSMAL_RS15125	PF01738	Dienelactone hydrolase family
MSMAL_RS15135	PF02607	B12 binding domain
MSMAL_RS15135	PF02310	B12 binding domain
MSMAL_RS15140	PF01569	PAP2 superfamily
MSMAL_RS15150	PF01680	SOR/SNZ family
MSMAL_RS15155	PF01174	SNO glutamine amidotransferase family
MSMAL_RS15250	PF01061	ABC-2 type transporter
MSMAL_RS15255	PF00005	ABC transporter
MSMAL_RS15260	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS15260	PF00005	ABC transporter
MSMAL_RS15265	PF12911	N-terminal TM domain of oligopeptide transport permease C
MSMAL_RS15265	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS15270	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS15280	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
MSMAL_RS15295	PF11987	Translation-initiation factor 2
MSMAL_RS15295	PF04760	Translation initiation factor IF-2, N-terminal region
MSMAL_RS15295	PF00009	Elongation factor Tu GTP binding domain
MSMAL_RS15295	PF08364	Bacterial translation initiation factor IF-2 associated region
MSMAL_RS15300	PF00334	Nucleoside diphosphate kinase
MSMAL_RS15335	PF01752	Collagenase
MSMAL_RS15335	PF18496	Collagenase G catalytic helper subdomain
MSMAL_RS15335	PF08453	Peptidase family M9 N-terminal
MSMAL_RS15395	PF00361	Proton-conducting membrane transporter
MSMAL_RS15400	PF00361	Proton-conducting membrane transporter
MSMAL_RS15405	PF00361	Proton-conducting membrane transporter
MSMAL_RS15405	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
MSMAL_RS15410	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
MSMAL_RS15420	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
MSMAL_RS15430	PF00146	NADH dehydrogenase
MSMAL_RS15435	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
MSMAL_RS15440	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
MSMAL_RS15445	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
MSMAL_RS15450	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
MSMAL_RS15460	PF01593	Flavin containing amine oxidoreductase
MSMAL_RS15465	PF04055	Radical SAM superfamily
MSMAL_RS15470	PF04055	Radical SAM superfamily
MSMAL_RS15475	PF04055	Radical SAM superfamily
MSMAL_RS15495	PF01494	FAD binding domain
MSMAL_RS15500	PF02386	Cation transport protein
MSMAL_RS15505	PF02080	TrkA-C domain
MSMAL_RS15505	PF02254	TrkA-N domain
MSMAL_RS15510	PF02386	Cation transport protein
MSMAL_RS15515	PF02254	TrkA-N domain
MSMAL_RS15515	PF02080	TrkA-C domain
MSMAL_RS15520	PF01556	DnaJ C terminal domain
MSMAL_RS15520	PF00226	DnaJ domain
MSMAL_RS15520	PF00684	DnaJ central domain
MSMAL_RS15525	PF00012	Hsp70 protein
MSMAL_RS15530	PF01025	GrpE
MSMAL_RS15575	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS15575	PF07568	Histidine kinase
MSMAL_RS15575	PF12282	Signal transduction histidine kinase
MSMAL_RS15580	PF00072	Response regulator receiver domain
MSMAL_RS15580	PF00486	Transcriptional regulatory protein, C terminal
MSMAL_RS15585	PF02568	Thiamine biosynthesis protein (ThiI)
MSMAL_RS15585	PF02926	THUMP domain
MSMAL_RS15590	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS15590	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS15595	PF01926	50S ribosome-binding GTPase
MSMAL_RS15605	PF00582	Universal stress protein family
MSMAL_RS15635	PF02005	N2,N2-dimethylguanosine tRNA methyltransferase
MSMAL_RS15655	PF13194	Domain of unknown function (DUF4010)
MSMAL_RS15690	PF00398	Ribosomal RNA adenine dimethylase
MSMAL_RS15695	PF05175	Methyltransferase small domain
MSMAL_RS15695	PF17827	PrmC N-terminal domain
MSMAL_RS15700	PF00690	Cation transporter/ATPase, N-terminus
MSMAL_RS15700	PF00689	Cation transporting ATPase, C-terminus
MSMAL_RS15705	PF09297	NADH pyrophosphatase zinc ribbon domain
MSMAL_RS15705	PF00293	NUDIX domain
MSMAL_RS15715	PF00440	Bacterial regulatory proteins, tetR family
MSMAL_RS15715	PF18665	Tetracyclin repressor-like, C-terminal domain
MSMAL_RS15740	PF00302	Chloramphenicol acetyltransferase
MSMAL_RS15750	PF12697	Alpha/beta hydrolase family
MSMAL_RS15765	PF00271	Helicase conserved C-terminal domain
MSMAL_RS15765	PF00270	DEAD/DEAH box helicase
MSMAL_RS15770	PF06628	Catalase-related immune-responsive
MSMAL_RS15770	PF00199	Catalase
MSMAL_RS15780	PF03193	RsgA GTPase
MSMAL_RS15825	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS15835	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
MSMAL_RS15840	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS15845	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS15845	PF12911	N-terminal TM domain of oligopeptide transport permease C
MSMAL_RS15850	PF00005	ABC transporter
MSMAL_RS15850	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS15855	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
MSMAL_RS15855	PF00005	ABC transporter
MSMAL_RS15865	PF02742	Iron dependent repressor, metal binding and dimerisation domain
MSMAL_RS15865	PF01325	Iron dependent repressor, N-terminal DNA binding domain
MSMAL_RS15880	PF04023	FeoA domain
MSMAL_RS15880	PF07664	Ferrous iron transport protein B C terminus
MSMAL_RS15880	PF17910	FeoB cytosolic helical domain
MSMAL_RS15880	PF02421	Ferrous iron transport protein B
MSMAL_RS15880	PF07670	Nucleoside recognition
MSMAL_RS15915	PF02416	mttA/Hcf106 family
MSMAL_RS15920	PF02416	mttA/Hcf106 family
MSMAL_RS15925	PF00902	Sec-independent protein translocase protein (TatC)
MSMAL_RS15930	PF00902	Sec-independent protein translocase protein (TatC)
MSMAL_RS15955	PF00892	EamA-like transporter family
MSMAL_RS15965	PF13195	Protein of unknown function (DUF4011)
MSMAL_RS15965	PF13086	AAA domain
MSMAL_RS15965	PF13195	Protein of unknown function (DUF4011)
MSMAL_RS15965	PF13087	AAA domain
MSMAL_RS15965	PF13087	AAA domain
MSMAL_RS15965	PF13086	AAA domain
MSMAL_RS15980	PF01862	Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
MSMAL_RS15985	PF05378	Hydantoinase/oxoprolinase N-terminal region
MSMAL_RS15985	PF01968	Hydantoinase/oxoprolinase
MSMAL_RS16005	PF01863	Protein of unknown function DUF45
MSMAL_RS16040	PF01934	Protein of unknown function DUF86
MSMAL_RS16055	PF08463	EcoEI R protein C-terminal
MSMAL_RS16055	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
MSMAL_RS16055	PF04851	Type III restriction enzyme, res subunit
MSMAL_RS16055	PF00271	Helicase conserved C-terminal domain
MSMAL_RS16065	PF00270	DEAD/DEAH box helicase
MSMAL_RS16065	PF09369	Domain of unknown function (DUF1998)
MSMAL_RS16065	PF00271	Helicase conserved C-terminal domain
MSMAL_RS16075	PF04011	LemA family
MSMAL_RS16120	PF03725	3' exoribonuclease family, domain 2
MSMAL_RS16120	PF00575	S1 RNA binding domain
MSMAL_RS16120	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS16120	PF00013	KH domain
MSMAL_RS16120	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS16125	PF03725	3' exoribonuclease family, domain 2
MSMAL_RS16125	PF00013	KH domain
MSMAL_RS16125	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
MSMAL_RS16125	PF01138	3' exoribonuclease family, domain 1
MSMAL_RS16125	PF00575	S1 RNA binding domain
MSMAL_RS16150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS16150	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS16165	PF03949	Malic enzyme, NAD binding domain
MSMAL_RS16165	PF00390	Malic enzyme, N-terminal domain
MSMAL_RS16175	PF13847	Methyltransferase domain
MSMAL_RS16190	PF00501	AMP-binding enzyme
MSMAL_RS16190	PF14535	AMP-binding enzyme C-terminal domain
MSMAL_RS16215	PF01791	DeoC/LacD family aldolase
MSMAL_RS16235	PF07683	Cobalamin synthesis protein cobW C-terminal domain
MSMAL_RS16235	PF02492	CobW/HypB/UreG, nucleotide-binding domain
MSMAL_RS16255	PF02774	Semialdehyde dehydrogenase, dimerisation domain
MSMAL_RS16255	PF01118	Semialdehyde dehydrogenase, NAD binding domain
MSMAL_RS16260	PF01969	Protein of unknown function DUF111
MSMAL_RS16265	PF00731	AIR carboxylase
MSMAL_RS16270	PF00248	Aldo/keto reductase family
MSMAL_RS16275	PF00440	Bacterial regulatory proteins, tetR family
MSMAL_RS16290	PF00696	Amino acid kinase family
MSMAL_RS16300	PF00005	ABC transporter
MSMAL_RS16300	PF02687	FtsX-like permease family
MSMAL_RS16300	PF12704	MacB-like periplasmic core domain
MSMAL_RS16305	PF00005	ABC transporter
MSMAL_RS16310	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS16315	PF01008	Initiation factor 2 subunit family
MSMAL_RS16330	PF01980	tRNA-methyltransferase O
MSMAL_RS16335	PF02514	CobN/Magnesium Chelatase
MSMAL_RS16345	PF02514	CobN/Magnesium Chelatase
MSMAL_RS16360	PF02535	ZIP Zinc transporter
MSMAL_RS16445	PF01638	HxlR-like helix-turn-helix
MSMAL_RS16455	PF00881	Nitroreductase family
MSMAL_RS16460	PF03992	Antibiotic biosynthesis monooxygenase
MSMAL_RS16470	PF02525	Flavodoxin-like fold
MSMAL_RS16480	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS16485	PF00005	ABC transporter
MSMAL_RS16485	PF08402	TOBE domain
MSMAL_RS16530	PF01568	Molydopterin dinucleotide binding domain
MSMAL_RS16530	PF00384	Molybdopterin oxidoreductase
MSMAL_RS16530	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
MSMAL_RS16545	PF07969	Amidohydrolase family
MSMAL_RS16560	PF08402	TOBE domain
MSMAL_RS16560	PF00005	ABC transporter
MSMAL_RS16565	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS16570	PF12849	PBP superfamily domain
MSMAL_RS16600	PF12706	Beta-lactamase superfamily domain
MSMAL_RS16625	PF03459	TOBE domain
MSMAL_RS16625	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
MSMAL_RS16630	PF00474	Sodium:solute symporter family
MSMAL_RS16675	PF02007	Tetrahydromethanopterin S-methyltransferase MtrH subunit
MSMAL_RS16685	PF01139	tRNA-splicing ligase RtcB
MSMAL_RS16695	PF01066	CDP-alcohol phosphatidyltransferase
MSMAL_RS16700	PF00596	Class II Aldolase and Adducin N-terminal domain
MSMAL_RS16715	PF00899	ThiF family
MSMAL_RS16720	PF07728	AAA domain (dynein-related subfamily)
MSMAL_RS16720	PF17868	AAA lid domain
MSMAL_RS16720	PF12592	Protein of unknown function (DUF3763)
MSMAL_RS16725	PF05762	VWA domain containing CoxE-like protein
MSMAL_RS16740	PF00694	Aconitase C-terminal domain
MSMAL_RS16740	PF00330	Aconitase family (aconitate hydratase)
MSMAL_RS16745	PF00285	Citrate synthase, C-terminal domain
MSMAL_RS16750	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
MSMAL_RS16770	PF04055	Radical SAM superfamily
MSMAL_RS16770	PF01938	TRAM domain
MSMAL_RS16770	PF00919	Uncharacterized protein family UPF0004
MSMAL_RS16775	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
MSMAL_RS16775	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
MSMAL_RS16775	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
MSMAL_RS16775	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
MSMAL_RS16780	PF02540	NAD synthase
MSMAL_RS16785	PF00583	Acetyltransferase (GNAT) family
MSMAL_RS16800	PF00266	Aminotransferase class-V
MSMAL_RS16805	PF00437	Type II/IV secretion system protein
MSMAL_RS16855	PF02634	FdhD/NarQ family
MSMAL_RS16860	PF00475	Imidazoleglycerol-phosphate dehydratase
MSMAL_RS16865	PF00977	Histidine biosynthesis protein
MSMAL_RS16870	PF01634	ATP phosphoribosyltransferase
MSMAL_RS16870	PF08029	HisG, C-terminal domain
MSMAL_RS16875	PF01941	S-adenosylmethionine synthetase (AdoMet synthetase)
MSMAL_RS16900	PF00557	Metallopeptidase family M24
MSMAL_RS16900	PF01321	Creatinase/Prolidase N-terminal domain
MSMAL_RS16905	PF00557	Metallopeptidase family M24
MSMAL_RS16920	PF01209	ubiE/COQ5 methyltransferase family
MSMAL_RS16925	PF01416	tRNA pseudouridine synthase
MSMAL_RS16950	PF00694	Aconitase C-terminal domain
MSMAL_RS16955	PF00180	Isocitrate/isopropylmalate dehydrogenase
MSMAL_RS16965	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS16970	PF01411	tRNA synthetases class II (A)
MSMAL_RS16970	PF02272	DHHA1 domain
MSMAL_RS16970	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
MSMAL_RS16995	PF04434	SWIM zinc finger
MSMAL_RS17000	PF00271	Helicase conserved C-terminal domain
MSMAL_RS17000	PF12419	SNF2 Helicase protein 
MSMAL_RS17000	PF00176	SNF2 family N-terminal domain
MSMAL_RS17005	PF00994	Probable molybdopterin binding domain
MSMAL_RS17020	PF01938	TRAM domain
MSMAL_RS17020	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS17025	PF04055	Radical SAM superfamily
MSMAL_RS17025	PF13186	Iron-sulfur cluster-binding domain
MSMAL_RS17045	PF01409	tRNA synthetases class II core domain (F)
MSMAL_RS17070	PF00690	Cation transporter/ATPase, N-terminus
MSMAL_RS17070	PF00689	Cation transporting ATPase, C-terminus
MSMAL_RS17085	PF02624	YcaO cyclodehydratase, ATP-ad Mg2+-binding
MSMAL_RS17095	PF00582	Universal stress protein family
MSMAL_RS17100	PF00582	Universal stress protein family
MSMAL_RS17105	PF00582	Universal stress protein family
MSMAL_RS17110	PF00582	Universal stress protein family
MSMAL_RS17125	PF00582	Universal stress protein family
MSMAL_RS17130	PF01018	GTP1/OBG
MSMAL_RS17130	PF01926	50S ribosome-binding GTPase
MSMAL_RS17130	PF04055	Radical SAM superfamily
MSMAL_RS17140	PF02001	Protein of unknown function  DUF134
MSMAL_RS17155	PF00152	tRNA synthetases class II (D, K and N) 
MSMAL_RS17155	PF01336	OB-fold nucleic acid binding domain
MSMAL_RS17160	PF04055	Radical SAM superfamily
MSMAL_RS17160	PF06968	Biotin and Thiamin Synthesis associated domain
MSMAL_RS17175	PF00719	Inorganic pyrophosphatase
MSMAL_RS17185	PF01208	Uroporphyrinogen decarboxylase (URO-D)
MSMAL_RS17190	PF02310	B12 binding domain
MSMAL_RS17190	PF02607	B12 binding domain
MSMAL_RS17205	PF13520	Amino acid permease
MSMAL_RS17250	PF07549	SecD/SecF GG Motif
MSMAL_RS17250	PF02355	Protein export membrane protein
MSMAL_RS17255	PF02355	Protein export membrane protein
MSMAL_RS17255	PF07549	SecD/SecF GG Motif
MSMAL_RS17270	PF01996	F420-0:Gamma-glutamyl ligase
MSMAL_RS17270	PF00881	Nitroreductase family
MSMAL_RS17280	PF00011	Hsp20/alpha crystallin family
MSMAL_RS17285	PF01676	Metalloenzyme superfamily
MSMAL_RS17285	PF10143	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
MSMAL_RS17290	PF00696	Amino acid kinase family
MSMAL_RS17290	PF03447	Homoserine dehydrogenase, NAD binding domain
MSMAL_RS17290	PF00742	Homoserine dehydrogenase
MSMAL_RS17290	PF13840	ACT domain 
MSMAL_RS17290	PF01842	ACT domain
MSMAL_RS17295	PF00586	AIR synthase related protein, N-terminal domain
MSMAL_RS17295	PF02769	AIR synthase related protein, C-terminal domain
MSMAL_RS17345	PF00202	Aminotransferase class-III
MSMAL_RS17350	PF00155	Aminotransferase class I and II
MSMAL_RS17360	PF01066	CDP-alcohol phosphatidyltransferase
MSMAL_RS17365	PF02666	Phosphatidylserine decarboxylase
MSMAL_RS17375	PF00293	NUDIX domain
MSMAL_RS17375	PF13344	Haloacid dehalogenase-like hydrolase
MSMAL_RS17405	PF07685	CobB/CobQ-like glutamine amidotransferase domain
MSMAL_RS17405	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
MSMAL_RS17410	PF06463	Molybdenum Cofactor Synthesis C
MSMAL_RS17410	PF04055	Radical SAM superfamily
MSMAL_RS17415	PF01975	Survival protein SurE
MSMAL_RS17420	PF01184	GPR1/FUN34/yaaH family
MSMAL_RS17440	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
MSMAL_RS17440	PF03129	Anticodon binding domain
MSMAL_RS17445	PF08459	UvrC Helix-hairpin-helix N-terminal
MSMAL_RS17445	PF01541	GIY-YIG catalytic domain
MSMAL_RS17465	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
MSMAL_RS17465	PF01409	tRNA synthetases class II core domain (F)
MSMAL_RS17475	PF01556	DnaJ C terminal domain
MSMAL_RS17475	PF00226	DnaJ domain
MSMAL_RS17480	PF00012	Hsp70 protein
MSMAL_RS17500	PF00118	TCP-1/cpn60 chaperonin family
MSMAL_RS17515	PF02541	Ppx/GppA phosphatase family
MSMAL_RS17520	PF02503	Polyphosphate kinase middle domain
MSMAL_RS17520	PF13089	Polyphosphate kinase N-terminal domain
MSMAL_RS17520	PF13090	Polyphosphate kinase C-terminal domain 2
MSMAL_RS17520	PF17941	Polyphosphate kinase C-terminal domain 1
MSMAL_RS17525	PF05190	MutS family domain IV
MSMAL_RS17525	PF05192	MutS domain III
MSMAL_RS17525	PF05188	MutS domain II
MSMAL_RS17525	PF01624	MutS domain I
MSMAL_RS17525	PF00488	MutS domain V
MSMAL_RS17540	PF01008	Initiation factor 2 subunit family
MSMAL_RS17545	PF01658	Myo-inositol-1-phosphate synthase
MSMAL_RS17565	PF04055	Radical SAM superfamily
MSMAL_RS17570	PF02769	AIR synthase related protein, C-terminal domain
MSMAL_RS17570	PF00586	AIR synthase related protein, N-terminal domain
MSMAL_RS17590	PF00528	Binding-protein-dependent transport system inner membrane component
MSMAL_RS17595	PF00005	ABC transporter
MSMAL_RS17605	PF01938	TRAM domain
MSMAL_RS17605	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS17610	PF01938	TRAM domain
MSMAL_RS17610	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS17615	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS17615	PF01938	TRAM domain
MSMAL_RS17620	PF05958	tRNA (Uracil-5-)-methyltransferase
MSMAL_RS17620	PF01938	TRAM domain
MSMAL_RS17660	PF00750	tRNA synthetases class I (R)
MSMAL_RS17660	PF05746	DALR anticodon binding domain
MSMAL_RS17660	PF03485	Arginyl tRNA synthetase N terminal domain
MSMAL_RS17685	PF01207	Dihydrouridine synthase (Dus)
MSMAL_RS17700	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
MSMAL_RS17700	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
MSMAL_RS17705	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
MSMAL_RS17730	PF00950	ABC 3 transport family
MSMAL_RS17735	PF00005	ABC transporter
MSMAL_RS17745	PF02742	Iron dependent repressor, metal binding and dimerisation domain
MSMAL_RS17745	PF01325	Iron dependent repressor, N-terminal DNA binding domain
MSMAL_RS17750	PF02447	GntP family permease
MSMAL_RS17755	PF01584	CheW-like domain
MSMAL_RS17760	PF02743	Cache domain
MSMAL_RS17760	PF00672	HAMP domain
MSMAL_RS17760	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
MSMAL_RS17765	PF00072	Response regulator receiver domain
MSMAL_RS17770	PF00072	Response regulator receiver domain
MSMAL_RS17775	PF01339	CheB methylesterase
MSMAL_RS17775	PF00072	Response regulator receiver domain
MSMAL_RS17780	PF07194	P2 response regulator binding domain
MSMAL_RS17780	PF01584	CheW-like domain
MSMAL_RS17780	PF02895	Signal transducing histidine kinase, homodimeric domain
MSMAL_RS17780	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS17780	PF01627	Hpt domain
MSMAL_RS17785	PF01739	CheR methyltransferase, SAM binding domain
MSMAL_RS17785	PF03705	CheR methyltransferase, all-alpha domain
MSMAL_RS17795	PF03975	CheD chemotactic sensory transduction
MSMAL_RS17800	PF01913	Formylmethanofuran-tetrahydromethanopterin formyltransferase
MSMAL_RS17800	PF02741	FTR, proximal lobe
MSMAL_RS17815	PF00571	CBS domain
MSMAL_RS17815	PF02163	Peptidase family M50
MSMAL_RS17820	PF00282	Pyridoxal-dependent decarboxylase conserved domain
MSMAL_RS17840	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS17840	PF07568	Histidine kinase
MSMAL_RS17840	PF12282	Signal transduction histidine kinase
MSMAL_RS17845	PF01436	NHL repeat
MSMAL_RS17845	PF00934	PE family
MSMAL_RS17860	PF10576	Iron-sulfur binding domain of endonuclease III
MSMAL_RS17860	PF00633	Helix-hairpin-helix motif
MSMAL_RS17860	PF00730	HhH-GPD superfamily base excision DNA repair protein
MSMAL_RS17870	PF12102	Domain of unknown function (DUF3578)
MSMAL_RS17870	PF07728	AAA domain (dynein-related subfamily)
MSMAL_RS17890	PF13581	Histidine kinase-like ATPase domain
MSMAL_RS17905	PF00589	Phage integrase family
MSMAL_RS17905	PF02899	Phage integrase, N-terminal SAM-like domain
MSMAL_RS17940	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
MSMAL_RS17950	PF13439	Glycosyltransferase Family 4
MSMAL_RS17950	PF00534	Glycosyl transferases group 1
MSMAL_RS17960	PF00534	Glycosyl transferases group 1
MSMAL_RS17960	PF13439	Glycosyltransferase Family 4
MSMAL_RS17970	PF07568	Histidine kinase
MSMAL_RS17970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS17970	PF12282	Signal transduction histidine kinase
MSMAL_RS18055	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
MSMAL_RS18125	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system
MSMAL_RS18155	PF00764	Arginosuccinate synthase
MSMAL_RS18170	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
MSMAL_RS18200	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS18200	PF01590	GAF domain
MSMAL_RS18200	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS18200	PF08446	PAS fold
MSMAL_RS18200	PF00360	Phytochrome region
MSMAL_RS18210	PF07043	Protein of unknown function (DUF1328)
MSMAL_RS18310	PF00301	Rubredoxin
MSMAL_RS18315	PF00512	His Kinase A (phospho-acceptor) domain
MSMAL_RS18315	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MSMAL_RS18415	PF00403	Heavy-metal-associated domain
MSMAL_RS18470	PF00582	Universal stress protein family
