locus-tag class description MPE_RS00005 PF00308 Bacterial dnaA protein MPE_RS00005 PF11638 DnaA N-terminal domain MPE_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix MPE_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MPE_RS00010 PF02767 DNA polymerase III beta subunit, central domain MPE_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MPE_RS00015 PF00204 DNA gyrase B MPE_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus MPE_RS00015 PF18053 DNA gyrase B subunit insert domain MPE_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS00015 PF01751 Toprim domain MPE_RS00025 PF02384 N-6 DNA Methylase MPE_RS00030 PF01420 Type I restriction modification DNA specificity domain MPE_RS00035 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system MPE_RS00045 PF02661 Fic/DOC family MPE_RS00045 PF13784 Fic/DOC family N-terminal MPE_RS00050 PF11867 Domain of unknown function (DUF3387) MPE_RS00050 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MPE_RS00050 PF18766 SWI2/SNF2 ATPase MPE_RS00055 PF13192 Thioredoxin domain MPE_RS00055 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS00060 PF07681 DoxX MPE_RS00065 PF05957 Bacterial protein of unknown function (DUF883) MPE_RS00080 PF01226 Formate/nitrite transporter MPE_RS00085 PF04542 Sigma-70 region 2 MPE_RS00085 PF08281 Sigma-70, region 4 MPE_RS00095 PF03795 YCII-related domain MPE_RS00100 PF03795 YCII-related domain MPE_RS00105 PF00266 Aminotransferase class-V MPE_RS00115 PF01381 Helix-turn-helix MPE_RS00115 PF07883 Cupin domain MPE_RS00120 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS00125 PF00581 Rhodanese-like domain MPE_RS00130 PF01053 Cys/Met metabolism PLP-dependent enzyme MPE_RS00160 PF04352 ProQ/FINO family MPE_RS00160 PF17516 ProQ C-terminal domain MPE_RS00170 PF00106 short chain dehydrogenase MPE_RS00180 PF04403 Paraquat-inducible protein A MPE_RS00185 PF04403 Paraquat-inducible protein A MPE_RS00190 PF02470 MlaD protein MPE_RS00220 PF03706 Lysylphosphatidylglycerol synthase TM region MPE_RS00225 PF13091 PLD-like domain MPE_RS00230 PF03372 Endonuclease/Exonuclease/phosphatase family MPE_RS00235 PF14480 DNA polymerase III polC-type N-terminus I MPE_RS00235 PF07733 Bacterial DNA polymerase III alpha NTPase domain MPE_RS00235 PF11490 DNA polymerase III polC-type N-terminus II MPE_RS00235 PF14579 Helix-hairpin-helix motif MPE_RS00235 PF02811 PHP domain MPE_RS00235 PF00929 Exonuclease MPE_RS00235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MPE_RS00240 PF04545 Sigma-70, region 4 MPE_RS00240 PF04539 Sigma-70 region 3 MPE_RS00240 PF04542 Sigma-70 region 2 MPE_RS00260 PF02230 Phospholipase/Carboxylesterase MPE_RS00275 PF01047 MarR family MPE_RS00280 PF02566 OsmC-like protein MPE_RS00285 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV MPE_RS00290 PF01435 Peptidase family M48 MPE_RS00290 PF13181 Tetratricopeptide repeat MPE_RS00300 PF01967 MoaC family MPE_RS00305 PF11846 Virulence factor membrane-bound polymerase, C-terminal MPE_RS00305 PF15864 Protein glycosylation ligase MPE_RS00305 PF04932 O-Antigen ligase MPE_RS00315 PF12706 Beta-lactamase superfamily domain MPE_RS00320 PF00498 FHA domain MPE_RS00330 PF03793 PASTA domain MPE_RS00330 PF00069 Protein kinase domain MPE_RS00335 PF03741 Integral membrane protein TerC family MPE_RS00340 PF00549 CoA-ligase MPE_RS00340 PF02629 CoA binding domain MPE_RS00345 PF00549 CoA-ligase MPE_RS00345 PF08442 ATP-grasp domain MPE_RS00350 PF01118 Semialdehyde dehydrogenase, NAD binding domain MPE_RS00355 PF02631 RecX family MPE_RS00360 PF00154 recA bacterial DNA recombination protein MPE_RS00365 PF00072 Response regulator receiver domain MPE_RS00365 PF00486 Transcriptional regulatory protein, C terminal MPE_RS00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS00370 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS00380 PF01098 Cell cycle protein MPE_RS00385 PF03717 Penicillin-binding Protein dimerisation domain MPE_RS00385 PF00905 Penicillin binding protein transpeptidase domain MPE_RS00405 PF02686 Glu-tRNAGln amidotransferase C subunit MPE_RS00410 PF01425 Amidase MPE_RS00415 PF02637 GatB domain MPE_RS00415 PF02934 GatB/GatE catalytic domain MPE_RS00425 PF00156 Phosphoribosyl transferase domain MPE_RS00440 PF01757 Acyltransferase family MPE_RS00445 PF00753 Metallo-beta-lactamase superfamily MPE_RS00455 PF07690 Major Facilitator Superfamily MPE_RS00455 PF07690 Major Facilitator Superfamily MPE_RS00465 PF01569 PAP2 superfamily MPE_RS00470 PF03352 Methyladenine glycosylase MPE_RS00480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS00480 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS00485 PF01323 DSBA-like thioredoxin domain MPE_RS00500 PF17755 UvrA DNA-binding domain MPE_RS00500 PF17760 UvrA interaction domain MPE_RS00530 PF00654 Voltage gated chloride channel MPE_RS00535 PF00436 Single-strand binding protein family MPE_RS00540 PF00999 Sodium/hydrogen exchanger family MPE_RS00540 PF02254 TrkA-N domain MPE_RS00545 PF09084 NMT1/THI5 like MPE_RS00550 PF09084 NMT1/THI5 like MPE_RS00555 PF00296 Luciferase-like monooxygenase MPE_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS00565 PF00005 ABC transporter MPE_RS00575 PF03459 TOBE domain MPE_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS00585 PF10417 C-terminal domain of 1-Cys peroxiredoxin MPE_RS00585 PF00578 AhpC/TSA family MPE_RS00600 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS00605 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS00610 PF12857 TOBE-like domain MPE_RS00610 PF17850 CysA C-terminal regulatory domain MPE_RS00610 PF00005 ABC transporter MPE_RS00615 PF03466 LysR substrate binding domain MPE_RS00615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS00620 PF13361 UvrD-like helicase C-terminal domain MPE_RS00620 PF00580 UvrD/REP helicase N-terminal domain MPE_RS00625 PF03547 Membrane transport protein MPE_RS00630 PF13609 Gram-negative porin MPE_RS00635 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS00640 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS00645 PF00270 DEAD/DEAH box helicase MPE_RS00645 PF17764 3′ DNA-binding domain (3′BD) MPE_RS00645 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MPE_RS00645 PF00271 Helicase conserved C-terminal domain MPE_RS00645 PF18074 Primosomal protein N C-terminal domain MPE_RS00650 PF01208 Uroporphyrinogen decarboxylase (URO-D) MPE_RS00655 PF00486 Transcriptional regulatory protein, C terminal MPE_RS00655 PF00072 Response regulator receiver domain MPE_RS00660 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS00660 PF00672 HAMP domain MPE_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS00670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS00670 PF03466 LysR substrate binding domain MPE_RS00695 PF00912 Transglycosylase MPE_RS00725 PF01170 Putative RNA methylase family UPF0020 MPE_RS00725 PF02926 THUMP domain MPE_RS00730 PF00309 Sigma-54 factor, Activator interacting domain (AID) MPE_RS00730 PF04963 Sigma-54 factor, core binding domain MPE_RS00730 PF04552 Sigma-54, DNA binding domain MPE_RS00735 PF00005 ABC transporter MPE_RS00745 PF13462 Thioredoxin MPE_RS00755 PF03485 Arginyl tRNA synthetase N terminal domain MPE_RS00755 PF05746 DALR anticodon binding domain MPE_RS00755 PF00750 tRNA synthetases class I (R) MPE_RS00760 PF00069 Protein kinase domain MPE_RS00760 PF08308 PEGA domain MPE_RS00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS00775 PF03466 LysR substrate binding domain MPE_RS00780 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS00785 PF01274 Malate synthase MPE_RS00805 PF05649 Peptidase family M13 MPE_RS00805 PF01431 Peptidase family M13 MPE_RS00810 PF01494 FAD binding domain MPE_RS00815 PF01434 Peptidase family M41 MPE_RS00815 PF17862 AAA+ lid domain MPE_RS00815 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS00820 PF00809 Pterin binding enzyme MPE_RS00820 PF02607 B12 binding domain MPE_RS00820 PF02965 Vitamin B12 dependent methionine synthase, activation domain MPE_RS00820 PF02574 Homocysteine S-methyltransferase MPE_RS00820 PF02310 B12 binding domain MPE_RS00830 PF00809 Pterin binding enzyme MPE_RS00830 PF02965 Vitamin B12 dependent methionine synthase, activation domain MPE_RS00830 PF02574 Homocysteine S-methyltransferase MPE_RS00830 PF02607 B12 binding domain MPE_RS00830 PF02310 B12 binding domain MPE_RS00840 PF01078 Magnesium chelatase, subunit ChlI MPE_RS00840 PF13335 Magnesium chelatase, subunit ChlI C-terminal MPE_RS00845 PF00543 Nitrogen regulatory protein P-II MPE_RS00850 PF00909 Ammonium Transporter Family MPE_RS00860 PF02705 K+ potassium transporter MPE_RS00870 PF03435 Saccharopine dehydrogenase NADP binding domain MPE_RS00875 PF13193 AMP-binding enzyme C-terminal domain MPE_RS00875 PF00501 AMP-binding enzyme MPE_RS00885 PF03594 Benzoate membrane transport protein MPE_RS00890 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MPE_RS00890 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MPE_RS00895 PF16326 ABC transporter C-terminal domain MPE_RS00895 PF00005 ABC transporter MPE_RS00895 PF12848 ABC transporter MPE_RS00905 PF00155 Aminotransferase class I and II MPE_RS00905 PF00392 Bacterial regulatory proteins, gntR family MPE_RS00915 PF01177 Asp/Glu/Hydantoin racemase MPE_RS00920 PF00155 Aminotransferase class I and II MPE_RS00925 PF02567 Phenazine biosynthesis-like protein MPE_RS00935 PF03328 HpcH/HpaI aldolase/citrate lyase family MPE_RS00945 PF00119 ATP synthase A chain MPE_RS00950 PF00137 ATP synthase subunit C MPE_RS00955 PF00430 ATP synthase B/B' CF(0) MPE_RS00960 PF00213 ATP synthase delta (OSCP) subunit MPE_RS00965 PF00306 ATP synthase alpha/beta chain, C terminal domain MPE_RS00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MPE_RS00965 PF02874 ATP synthase alpha/beta family, beta-barrel domain MPE_RS00970 PF00231 ATP synthase MPE_RS00975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MPE_RS00975 PF02874 ATP synthase alpha/beta family, beta-barrel domain MPE_RS00980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MPE_RS00980 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MPE_RS00990 PF04452 RNA methyltransferase MPE_RS00995 PF01636 Phosphotransferase enzyme family MPE_RS01000 PF04453 LPS transport system D MPE_RS01005 PF09312 SurA N-terminal domain MPE_RS01005 PF00639 PPIC-type PPIASE domain MPE_RS01010 PF00398 Ribosomal RNA adenine dimethylase MPE_RS01020 PF00545 ribonuclease MPE_RS01025 PF01515 Phosphate acetyl/butaryl transferase MPE_RS01025 PF00390 Malic enzyme, N-terminal domain MPE_RS01025 PF03949 Malic enzyme, NAD binding domain MPE_RS01030 PF00989 PAS fold MPE_RS01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS01030 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS01035 PF00072 Response regulator receiver domain MPE_RS01035 PF00196 Bacterial regulatory proteins, luxR family MPE_RS01040 PF00586 AIR synthase related protein, N-terminal domain MPE_RS01040 PF02769 AIR synthase related protein, C-terminal domain MPE_RS01045 PF04608 Phosphatidylglycerophosphatase A MPE_RS01050 PF02464 Competence-damaged protein MPE_RS01055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MPE_RS01060 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS01060 PF00563 EAL domain MPE_RS01060 PF03707 Bacterial signalling protein N terminal repeat MPE_RS01080 PF13603 Leucyl-tRNA synthetase, Domain 2 MPE_RS01080 PF08264 Anticodon-binding domain of tRNA MPE_RS01080 PF09334 tRNA synthetases class I (M) MPE_RS01085 PF02472 Biopolymer transport protein ExbD/TolR MPE_RS01090 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS01095 PF05173 Dihydrodipicolinate reductase, C-terminus MPE_RS01095 PF01113 Dihydrodipicolinate reductase, N-terminus MPE_RS01100 PF04355 SmpA / OmlA family MPE_RS01105 PF01475 Ferric uptake regulator family MPE_RS01110 PF07475 HPr Serine kinase C-terminal domain MPE_RS01110 PF02603 HPr Serine kinase N terminus MPE_RS01115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MPE_RS01120 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MPE_RS01125 PF01544 CorA-like Mg2+ transporter protein MPE_RS01140 PF00106 short chain dehydrogenase MPE_RS01175 PF00255 Glutathione peroxidase MPE_RS01190 PF01467 Cytidylyltransferase-like MPE_RS01200 PF03710 Glutamate-ammonia ligase adenylyltransferase MPE_RS01200 PF08335 GlnD PII-uridylyltransferase MPE_RS01210 PF00795 Carbon-nitrogen hydrolase MPE_RS01215 PF01494 FAD binding domain MPE_RS01240 PF01593 Flavin containing amine oxidoreductase MPE_RS01245 PF00180 Isocitrate/isopropylmalate dehydrogenase MPE_RS01260 PF00557 Metallopeptidase family M24 MPE_RS01260 PF05195 Aminopeptidase P, N-terminal domain MPE_RS01265 PF00248 Aldo/keto reductase family MPE_RS01275 PF00483 Nucleotidyl transferase MPE_RS01280 PF02675 S-adenosylmethionine decarboxylase MPE_RS01285 PF02780 Transketolase, C-terminal domain MPE_RS01285 PF02779 Transketolase, pyrimidine binding domain MPE_RS01285 PF00456 Transketolase, thiamine diphosphate binding domain MPE_RS01290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MPE_RS01290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MPE_RS01295 PF04151 Bacterial pre-peptidase C-terminal domain MPE_RS01295 PF00082 Subtilase family MPE_RS01305 PF08279 HTH domain MPE_RS01305 PF02237 Biotin protein ligase C terminal domain MPE_RS01305 PF03099 Biotin/lipoate A/B protein ligase family MPE_RS01315 PF01751 Toprim domain MPE_RS01315 PF01131 DNA topoisomerase MPE_RS01325 PF00582 Universal stress protein family MPE_RS01335 PF00171 Aldehyde dehydrogenase family MPE_RS01340 PF06508 Queuosine biosynthesis protein QueC MPE_RS01350 PF01029 NusB family MPE_RS01350 PF01189 16S rRNA methyltransferase RsmB/F MPE_RS01360 PF00989 PAS fold MPE_RS01360 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS01360 PF00672 HAMP domain MPE_RS01365 PF02954 Bacterial regulatory protein, Fis family MPE_RS01365 PF00072 Response regulator receiver domain MPE_RS01365 PF00158 Sigma-54 interaction domain MPE_RS01375 PF02699 Preprotein translocase subunit MPE_RS01380 PF02355 Protein export membrane protein MPE_RS01380 PF13721 SecD export protein N-terminal TM region MPE_RS01380 PF07549 SecD/SecF GG Motif MPE_RS01385 PF02355 Protein export membrane protein MPE_RS01385 PF07549 SecD/SecF GG Motif MPE_RS01395 PF04361 Protein of unknown function (DUF494) MPE_RS01400 PF17782 DprA winged helix domain MPE_RS01400 PF02481 DNA recombination-mediator protein A MPE_RS01405 PF01476 LysM domain MPE_RS01410 PF01327 Polypeptide deformylase MPE_RS01415 PF02911 Formyl transferase, C-terminal domain MPE_RS01415 PF00551 Formyl transferase MPE_RS01420 PF01435 Peptidase family M48 MPE_RS01440 PF00162 Phosphoglycerate kinase MPE_RS01445 PF00224 Pyruvate kinase, barrel domain MPE_RS01445 PF02887 Pyruvate kinase, alpha/beta domain MPE_RS01450 PF01116 Fructose-bisphosphate aldolase class-II MPE_RS01455 PF01259 SAICAR synthetase MPE_RS01465 PF00085 Thioredoxin MPE_RS01470 PF00731 AIR carboxylase MPE_RS01475 PF02222 ATP-grasp domain MPE_RS01475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MPE_RS01480 PF01300 Telomere recombination MPE_RS01480 PF03481 Putative GTP-binding controlling metal-binding MPE_RS01490 PF00657 GDSL-like Lipase/Acylhydrolase MPE_RS01490 PF03797 Autotransporter beta-domain MPE_RS01500 PF00814 Glycoprotease family MPE_RS01510 PF03167 Uracil DNA glycosylase superfamily MPE_RS01515 PF13188 PAS domain MPE_RS01515 PF03707 Bacterial signalling protein N terminal repeat MPE_RS01515 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS01515 PF00563 EAL domain MPE_RS01520 PF01544 CorA-like Mg2+ transporter protein MPE_RS01525 PF00490 Delta-aminolevulinic acid dehydratase MPE_RS01550 PF07943 Penicillin-binding protein 5, C-terminal domain MPE_RS01550 PF00768 D-alanyl-D-alanine carboxypeptidase MPE_RS01555 PF01063 Amino-transferase class IV MPE_RS01560 PF04359 Protein of unknown function (DUF493) MPE_RS01565 PF00005 ABC transporter MPE_RS01575 PF03099 Biotin/lipoate A/B protein ligase family MPE_RS01580 PF04055 Radical SAM superfamily MPE_RS01580 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MPE_RS01590 PF00578 AhpC/TSA family MPE_RS01590 PF02683 Cytochrome C biogenesis protein transmembrane region MPE_RS01590 PF17991 Thioredoxin like C-terminal domain MPE_RS01605 PF02515 CoA-transferase family III MPE_RS01620 PF00381 PTS HPr component phosphorylation site MPE_RS01630 PF02896 PEP-utilising enzyme, TIM barrel domain MPE_RS01630 PF00391 PEP-utilising enzyme, mobile domain MPE_RS01630 PF05524 PEP-utilising enzyme, N-terminal MPE_RS01660 PF05496 Holliday junction DNA helicase RuvB P-loop domain MPE_RS01660 PF05491 RuvB C-terminal winged helix domain MPE_RS01660 PF17864 RuvB AAA lid domain MPE_RS01665 PF13847 Methyltransferase domain MPE_RS01670 PF01168 Alanine racemase, N-terminal domain MPE_RS01670 PF14031 Putative serine dehydratase domain MPE_RS01675 PF00300 Histidine phosphatase superfamily (branch 1) MPE_RS01695 PF01557 Fumarylacetoacetate (FAA) hydrolase family MPE_RS01700 PF00672 HAMP domain MPE_RS01700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS01700 PF02203 Tar ligand binding domain homologue MPE_RS01710 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MPE_RS01710 PF00384 Molybdopterin oxidoreductase MPE_RS01710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MPE_RS01710 PF12838 4Fe-4S dicluster domain MPE_RS01710 PF01568 Molydopterin dinucleotide binding domain MPE_RS01715 PF10531 SLBB domain MPE_RS01715 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MPE_RS01715 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MPE_RS01730 PF13360 PQQ-like domain MPE_RS01730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS01740 PF13193 AMP-binding enzyme C-terminal domain MPE_RS01740 PF00501 AMP-binding enzyme MPE_RS01745 PF00501 AMP-binding enzyme MPE_RS01745 PF13193 AMP-binding enzyme C-terminal domain MPE_RS01750 PF01037 Lrp/AsnC ligand binding domain MPE_RS01755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS01760 PF00351 Biopterin-dependent aromatic amino acid hydroxylase MPE_RS01775 PF00732 GMC oxidoreductase MPE_RS01775 PF05199 GMC oxidoreductase MPE_RS01790 PF13193 AMP-binding enzyme C-terminal domain MPE_RS01790 PF00501 AMP-binding enzyme MPE_RS01810 PF00196 Bacterial regulatory proteins, luxR family MPE_RS01810 PF00072 Response regulator receiver domain MPE_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS01815 PF07730 Histidine kinase MPE_RS01815 PF05231 MASE1 MPE_RS01820 PF00267 Gram-negative porin MPE_RS01825 PF01070 FMN-dependent dehydrogenase MPE_RS01830 PF00171 Aldehyde dehydrogenase family MPE_RS01840 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS01840 PF13360 PQQ-like domain MPE_RS01850 PF01590 GAF domain MPE_RS01850 PF02954 Bacterial regulatory protein, Fis family MPE_RS01850 PF00158 Sigma-54 interaction domain MPE_RS01855 PF01169 Uncharacterized protein family UPF0016 MPE_RS01880 PF00202 Aminotransferase class-III MPE_RS01895 PF02371 Transposase IS116/IS110/IS902 family MPE_RS01895 PF01548 Transposase MPE_RS01905 PF01548 Transposase MPE_RS01905 PF02371 Transposase IS116/IS110/IS902 family MPE_RS01910 PF05598 Transposase domain (DUF772) MPE_RS01910 PF01609 Transposase DDE domain MPE_RS01915 PF02371 Transposase IS116/IS110/IS902 family MPE_RS01915 PF01548 Transposase MPE_RS01960 PF00743 Flavin-binding monooxygenase-like MPE_RS01965 PF00144 Beta-lactamase MPE_RS01970 PF13193 AMP-binding enzyme C-terminal domain MPE_RS01970 PF00501 AMP-binding enzyme MPE_RS01970 PF16177 Acetyl-coenzyme A synthetase N-terminus MPE_RS01975 PF00158 Sigma-54 interaction domain MPE_RS01975 PF01590 GAF domain MPE_RS01975 PF02954 Bacterial regulatory protein, Fis family MPE_RS02025 PF02627 Carboxymuconolactone decarboxylase family MPE_RS02035 PF01557 Fumarylacetoacetate (FAA) hydrolase family MPE_RS02050 PF05552 Conserved TM helix MPE_RS02050 PF00924 Mechanosensitive ion channel MPE_RS02065 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS02075 PF02803 Thiolase, C-terminal domain MPE_RS02075 PF00108 Thiolase, N-terminal domain MPE_RS02080 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MPE_RS02080 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS02080 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPE_RS02090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS02090 PF12806 Acetyl-CoA dehydrogenase C-terminal like MPE_RS02090 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS02090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS02105 PF13180 PDZ domain MPE_RS02105 PF17820 PDZ domain MPE_RS02110 PF08546 Ketopantoate reductase PanE/ApbA C terminal MPE_RS02110 PF02558 Ketopantoate reductase PanE/ApbA MPE_RS02125 PF01740 STAS domain MPE_RS02125 PF00916 Sulfate permease family MPE_RS02130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MPE_RS02135 PF00166 Chaperonin 10 Kd subunit MPE_RS02140 PF00118 TCP-1/cpn60 chaperonin family MPE_RS02150 PF01734 Patatin-like phospholipase MPE_RS02155 PF01926 50S ribosome-binding GTPase MPE_RS02160 PF00034 Cytochrome c MPE_RS02165 PF05140 ResB-like family MPE_RS02170 PF01578 Cytochrome C assembly protein MPE_RS02180 PF00174 Oxidoreductase molybdopterin binding domain MPE_RS02185 PF01794 Ferric reductase like transmembrane component MPE_RS02190 PF03061 Thioesterase superfamily MPE_RS02195 PF00005 ABC transporter MPE_RS02195 PF00664 ABC transporter transmembrane region MPE_RS02210 PF07152 YaeQ protein MPE_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS02215 PF03466 LysR substrate binding domain MPE_RS02220 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS02225 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS02230 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS02235 PF00005 ABC transporter MPE_RS02245 PF01979 Amidohydrolase family MPE_RS02255 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS02260 PF07690 Major Facilitator Superfamily MPE_RS02270 PF02381 MraZ protein, putative antitoxin-like MPE_RS02275 PF01795 MraW methylase family MPE_RS02280 PF04999 Cell division protein FtsL MPE_RS02285 PF00905 Penicillin binding protein transpeptidase domain MPE_RS02285 PF03717 Penicillin-binding Protein dimerisation domain MPE_RS02290 PF08245 Mur ligase middle domain MPE_RS02290 PF02875 Mur ligase family, glutamate ligase domain MPE_RS02295 PF01225 Mur ligase family, catalytic domain MPE_RS02295 PF02875 Mur ligase family, glutamate ligase domain MPE_RS02295 PF08245 Mur ligase middle domain MPE_RS02300 PF00953 Glycosyl transferase family 4 MPE_RS02300 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MPE_RS02305 PF08245 Mur ligase middle domain MPE_RS02305 PF02875 Mur ligase family, glutamate ligase domain MPE_RS02310 PF01098 Cell cycle protein MPE_RS02315 PF04101 Glycosyltransferase family 28 C-terminal domain MPE_RS02315 PF03033 Glycosyltransferase family 28 N-terminal domain MPE_RS02320 PF02875 Mur ligase family, glutamate ligase domain MPE_RS02320 PF08245 Mur ligase middle domain MPE_RS02320 PF01225 Mur ligase family, catalytic domain MPE_RS02325 PF01820 D-ala D-ala ligase N-terminus MPE_RS02325 PF07478 D-ala D-ala ligase C-terminus MPE_RS02330 PF08478 POTRA domain, FtsQ-type MPE_RS02330 PF03799 Cell division protein FtsQ MPE_RS02335 PF02491 SHS2 domain inserted in FTSA MPE_RS02340 PF00091 Tubulin/FtsZ family, GTPase domain MPE_RS02340 PF12327 FtsZ family, C-terminal domain MPE_RS02345 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MPE_RS02370 PF01011 PQQ enzyme repeat MPE_RS02370 PF13360 PQQ-like domain MPE_RS02385 PF13360 PQQ-like domain MPE_RS02385 PF01011 PQQ enzyme repeat MPE_RS02390 PF07730 Histidine kinase MPE_RS02390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS02390 PF00672 HAMP domain MPE_RS02395 PF00196 Bacterial regulatory proteins, luxR family MPE_RS02395 PF00072 Response regulator receiver domain MPE_RS02400 PF01590 GAF domain MPE_RS02400 PF02954 Bacterial regulatory protein, Fis family MPE_RS02400 PF00158 Sigma-54 interaction domain MPE_RS02405 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS02415 PF02075 Crossover junction endodeoxyribonuclease RuvC MPE_RS02430 PF01808 AICARFT/IMPCHase bienzyme MPE_RS02430 PF02142 MGS-like domain MPE_RS02435 PF02954 Bacterial regulatory protein, Fis family MPE_RS02440 PF01207 Dihydrouridine synthase (Dus) MPE_RS02465 PF00106 short chain dehydrogenase MPE_RS02470 PF01545 Cation efflux family MPE_RS02485 PF07731 Multicopper oxidase MPE_RS02485 PF07732 Multicopper oxidase MPE_RS02505 PF00696 Amino acid kinase family MPE_RS02515 PF00440 Bacterial regulatory proteins, tetR family MPE_RS02525 PF00293 NUDIX domain MPE_RS02530 PF03884 DNA gyrase inhibitor YacG MPE_RS02535 PF07072 Cell division protein MPE_RS02540 PF01121 Dephospho-CoA kinase MPE_RS02545 PF06750 Bacterial Peptidase A24 N-terminal domain MPE_RS02545 PF01478 Type IV leader peptidase family MPE_RS02550 PF00482 Type II secretion system (T2SS), protein F MPE_RS02555 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MPE_RS02555 PF00437 Type II/IV secretion system protein MPE_RS02565 PF00348 Polyprenyl synthetase MPE_RS02570 PF00829 Ribosomal prokaryotic L21 protein MPE_RS02575 PF01016 Ribosomal L27 protein MPE_RS02580 PF01926 50S ribosome-binding GTPase MPE_RS02580 PF01018 GTP1/OBG MPE_RS02585 PF01472 PUA domain MPE_RS02585 PF00696 Amino acid kinase family MPE_RS02595 PF00293 NUDIX domain MPE_RS02600 PF04073 Aminoacyl-tRNA editing domain MPE_RS02600 PF03129 Anticodon binding domain MPE_RS02600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MPE_RS02605 PF01464 Transglycosylase SLT domain MPE_RS02605 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MPE_RS02610 PF02441 Flavoprotein MPE_RS02615 PF00462 Glutaredoxin MPE_RS02625 PF17827 PrmC N-terminal domain MPE_RS02625 PF05175 Methyltransferase small domain MPE_RS02630 PF03462 PCRF domain MPE_RS02630 PF00472 RF-1 domain MPE_RS02635 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MPE_RS02635 PF01488 Shikimate / quinate 5-dehydrogenase MPE_RS02635 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MPE_RS02650 PF01242 6-pyruvoyl tetrahydropterin synthase MPE_RS02655 PF00202 Aminotransferase class-III MPE_RS02665 PF00155 Aminotransferase class I and II MPE_RS02670 PF03006 Haemolysin-III related MPE_RS02675 PF01938 TRAM domain MPE_RS02675 PF00919 Uncharacterized protein family UPF0004 MPE_RS02675 PF04055 Radical SAM superfamily MPE_RS02750 PF00589 Phage integrase family MPE_RS02750 PF02899 Phage integrase, N-terminal SAM-like domain MPE_RS02775 PF00106 short chain dehydrogenase MPE_RS02785 PF01171 PP-loop family MPE_RS02800 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS02800 PF12804 MobA-like NTP transferase domain MPE_RS02805 PF00226 DnaJ domain MPE_RS02805 PF01556 DnaJ C terminal domain MPE_RS02805 PF00684 DnaJ central domain MPE_RS02815 PF01380 SIS domain MPE_RS02835 PF02049 Flagellar hook-basal body complex protein FliE MPE_RS02840 PF01514 Secretory protein of YscJ/FliF family MPE_RS02840 PF08345 Flagellar M-ring protein C-terminal MPE_RS02845 PF14841 FliG middle domain MPE_RS02845 PF14842 FliG N-terminal domain MPE_RS02845 PF01706 FliG C-terminal domain MPE_RS02855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MPE_RS02855 PF18269 T3SS EscN ATPase C-terminal domain MPE_RS02875 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MPE_RS02875 PF02154 Flagellar motor switch protein FliM MPE_RS02880 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MPE_RS02880 PF16973 Flagellar motor switch protein FliN N-terminal MPE_RS02885 PF04347 Flagellar biosynthesis protein, FliO MPE_RS02890 PF00813 FliP family MPE_RS02895 PF01313 Bacterial export proteins, family 3 MPE_RS02900 PF01311 Bacterial export proteins, family 1 MPE_RS02915 PF06906 Protein of unknown function (DUF1272) MPE_RS02920 PF00072 Response regulator receiver domain MPE_RS02920 PF00196 Bacterial regulatory proteins, luxR family MPE_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS02925 PF07730 Histidine kinase MPE_RS02925 PF05231 MASE1 MPE_RS02935 PF00072 Response regulator receiver domain MPE_RS02940 PF02895 Signal transducing histidine kinase, homodimeric domain MPE_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS02940 PF01627 Hpt domain MPE_RS02940 PF01584 CheW-like domain MPE_RS02940 PF09078 CheY binding MPE_RS02945 PF00672 HAMP domain MPE_RS02945 PF02203 Tar ligand binding domain homologue MPE_RS02945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS02950 PF01584 CheW-like domain MPE_RS02955 PF02678 Pirin MPE_RS02955 PF05726 Pirin C-terminal cupin domain MPE_RS02970 PF01494 FAD binding domain MPE_RS02975 PF13098 Thioredoxin-like domain MPE_RS02975 PF10411 Disulfide bond isomerase protein N-terminus MPE_RS03005 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS03015 PF00171 Aldehyde dehydrogenase family MPE_RS03020 PF01336 OB-fold nucleic acid binding domain MPE_RS03020 PF00152 tRNA synthetases class II (D, K and N) MPE_RS03035 PF13439 Glycosyltransferase Family 4 MPE_RS03040 PF00535 Glycosyl transferase family 2 MPE_RS03050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MPE_RS03050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MPE_RS03050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MPE_RS03055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MPE_RS03060 PF02397 Bacterial sugar transferase MPE_RS03065 PF02719 Polysaccharide biosynthesis protein MPE_RS03080 PF05159 Capsule polysaccharide biosynthesis protein MPE_RS03085 PF00535 Glycosyl transferase family 2 MPE_RS03100 PF01209 ubiE/COQ5 methyltransferase family MPE_RS03120 PF02563 Polysaccharide biosynthesis/export protein MPE_RS03120 PF10531 SLBB domain MPE_RS03130 PF00005 ABC transporter MPE_RS03135 PF01061 ABC-2 type transporter MPE_RS03140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MPE_RS03145 PF00483 Nucleotidyl transferase MPE_RS03150 PF04321 RmlD substrate binding domain MPE_RS03155 PF16363 GDP-mannose 4,6 dehydratase MPE_RS03160 PF01050 Mannose-6-phosphate isomerase MPE_RS03160 PF00483 Nucleotidyl transferase MPE_RS03165 PF00953 Glycosyl transferase family 4 MPE_RS03170 PF00271 Helicase conserved C-terminal domain MPE_RS03170 PF00270 DEAD/DEAH box helicase MPE_RS03175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MPE_RS03180 PF02545 Maf-like protein MPE_RS03190 PF01783 Ribosomal L32p protein family MPE_RS03195 PF02504 Fatty acid synthesis protein MPE_RS03200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MPE_RS03200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MPE_RS03205 PF00698 Acyl transferase domain MPE_RS03215 PF00550 Phosphopantetheine attachment site MPE_RS03220 PF00109 Beta-ketoacyl synthase, N-terminal domain MPE_RS03220 PF02801 Beta-ketoacyl synthase, C-terminal domain MPE_RS03230 PF08281 Sigma-70, region 4 MPE_RS03230 PF04542 Sigma-70 region 2 MPE_RS03240 PF03888 MucB/RseB N-terminal domain MPE_RS03240 PF17188 MucB/RseB C-terminal domain MPE_RS03245 PF13180 PDZ domain MPE_RS03250 PF06421 GTP-binding protein LepA C-terminus MPE_RS03250 PF00679 Elongation factor G C-terminus MPE_RS03250 PF03144 Elongation factor Tu domain 2 MPE_RS03250 PF00009 Elongation factor Tu GTP binding domain MPE_RS03255 PF10502 Signal peptidase, peptidase S26 MPE_RS03265 PF14622 Ribonuclease-III-like MPE_RS03265 PF00035 Double-stranded RNA binding motif MPE_RS03270 PF01926 50S ribosome-binding GTPase MPE_RS03270 PF07650 KH domain MPE_RS03275 PF11967 Recombination protein O N terminal MPE_RS03275 PF02565 Recombination protein O C terminal MPE_RS03280 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MPE_RS03285 PF01648 4'-phosphopantetheinyl transferase superfamily MPE_RS03290 PF00933 Glycosyl hydrolase family 3 N terminal domain MPE_RS03295 PF12111 Polyribonucleotide phosphorylase C terminal MPE_RS03295 PF10150 Ribonuclease E/G family MPE_RS03295 PF00575 S1 RNA binding domain MPE_RS03300 PF00849 RNA pseudouridylate synthase MPE_RS03300 PF01479 S4 domain MPE_RS03315 PF01343 Peptidase family S49 MPE_RS03315 PF06965 Na+/H+ antiporter 1 MPE_RS03325 PF01476 LysM domain MPE_RS03325 PF04972 BON domain MPE_RS03330 PF02492 CobW/HypB/UreG, nucleotide-binding domain MPE_RS03335 PF01730 UreF MPE_RS03340 PF05194 UreE urease accessory protein, C-terminal domain MPE_RS03340 PF02814 UreE urease accessory protein, N-terminal domain MPE_RS03350 PF00449 Urease alpha-subunit, N-terminal domain MPE_RS03350 PF01979 Amidohydrolase family MPE_RS03355 PF00699 Urease beta subunit MPE_RS03360 PF00547 Urease, gamma subunit MPE_RS03365 PF00989 PAS fold MPE_RS03365 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS03365 PF01627 Hpt domain MPE_RS03365 PF18415 Histidine kinase receptor ArcB trans-membrane domain MPE_RS03365 PF00072 Response regulator receiver domain MPE_RS03365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS03370 PF00072 Response regulator receiver domain MPE_RS03390 PF00857 Isochorismatase family MPE_RS03455 PF07715 TonB-dependent Receptor Plug Domain MPE_RS03455 PF00593 TonB dependent receptor MPE_RS03460 PF01965 DJ-1/PfpI family MPE_RS03480 PF13495 Phage integrase, N-terminal SAM-like domain MPE_RS03480 PF00589 Phage integrase family MPE_RS03490 PF02653 Branched-chain amino acid transport system / permease component MPE_RS03495 PF02653 Branched-chain amino acid transport system / permease component MPE_RS03500 PF12399 Branched-chain amino acid ATP-binding cassette transporter MPE_RS03500 PF00005 ABC transporter MPE_RS03505 PF00005 ABC transporter MPE_RS03510 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS03520 PF03441 FAD binding domain of DNA photolyase MPE_RS03520 PF00875 DNA photolyase MPE_RS03525 PF02622 Uncharacterized ACR, COG1678 MPE_RS03530 PF03652 Holliday junction resolvase MPE_RS03535 PF00156 Phosphoribosyl transferase domain MPE_RS03540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MPE_RS03540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MPE_RS03545 PF01979 Amidohydrolase family MPE_RS03560 PF00300 Histidine phosphatase superfamily (branch 1) MPE_RS03565 PF00581 Rhodanese-like domain MPE_RS03570 PF00462 Glutaredoxin MPE_RS03575 PF02556 Preprotein translocase subunit SecB MPE_RS03580 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MPE_RS03580 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MPE_RS03590 PF01757 Acyltransferase family MPE_RS03595 PF09721 Transmembrane exosortase (Exosortase_EpsH) MPE_RS03605 PF00535 Glycosyl transferase family 2 MPE_RS03615 PF00722 Glycosyl hydrolases family 16 MPE_RS03630 PF01757 Acyltransferase family MPE_RS03670 PF00535 Glycosyl transferase family 2 MPE_RS03675 PF10609 NUBPL iron-transfer P-loop NTPase MPE_RS03695 PF02397 Bacterial sugar transferase MPE_RS03705 PF01774 UreD urease accessory protein MPE_RS03715 PF01323 DSBA-like thioredoxin domain MPE_RS03720 PF03466 LysR substrate binding domain MPE_RS03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS03745 PF02203 Tar ligand binding domain homologue MPE_RS03745 PF00672 HAMP domain MPE_RS03745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS03755 PF00155 Aminotransferase class I and II MPE_RS03755 PF00392 Bacterial regulatory proteins, gntR family MPE_RS03770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MPE_RS03770 PF00034 Cytochrome c MPE_RS03770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS03775 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MPE_RS03805 PF00196 Bacterial regulatory proteins, luxR family MPE_RS03805 PF00072 Response regulator receiver domain MPE_RS03810 PF00857 Isochorismatase family MPE_RS03815 PF00005 ABC transporter MPE_RS03820 PF00857 Isochorismatase family MPE_RS03840 PF07729 FCD domain MPE_RS03840 PF00392 Bacterial regulatory proteins, gntR family MPE_RS03850 PF01425 Amidase MPE_RS03860 PF01425 Amidase MPE_RS03870 PF07687 Peptidase dimerisation domain MPE_RS03870 PF01546 Peptidase family M20/M25/M40 MPE_RS03875 PF01546 Peptidase family M20/M25/M40 MPE_RS03885 PF00392 Bacterial regulatory proteins, gntR family MPE_RS03885 PF07729 FCD domain MPE_RS03890 PF00576 HIUase/Transthyretin family MPE_RS03900 PF00860 Permease family MPE_RS03905 PF01979 Amidohydrolase family MPE_RS03910 PF02548 Ketopantoate hydroxymethyltransferase MPE_RS03925 PF07729 FCD domain MPE_RS03925 PF00392 Bacterial regulatory proteins, gntR family MPE_RS03940 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase MPE_RS03945 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG MPE_RS03955 PF01039 Carboxyl transferase domain MPE_RS03960 PF06857 Malonate decarboxylase delta subunit (MdcD) MPE_RS03965 PF16957 Malonate decarboxylase, alpha subunit, transporter MPE_RS03970 PF03401 Tripartite tricarboxylate transporter family receptor MPE_RS03975 PF00375 Sodium:dicarboxylate symporter family MPE_RS03985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MPE_RS03985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MPE_RS03990 PF03450 CO dehydrogenase flavoprotein C-terminal domain MPE_RS03990 PF00941 FAD binding domain in molybdopterin dehydrogenase MPE_RS03995 PF03466 LysR substrate binding domain MPE_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS04000 PF01979 Amidohydrolase family MPE_RS04010 PF00005 ABC transporter MPE_RS04015 PF02653 Branched-chain amino acid transport system / permease component MPE_RS04025 PF02608 ABC transporter substrate-binding protein PnrA-like MPE_RS04040 PF00962 Adenosine/AMP deaminase MPE_RS04050 PF00196 Bacterial regulatory proteins, luxR family MPE_RS04050 PF00072 Response regulator receiver domain MPE_RS04055 PF08448 PAS fold MPE_RS04055 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS04055 PF00072 Response regulator receiver domain MPE_RS04055 PF13426 PAS domain MPE_RS04055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS04060 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS04065 PF06234 Toluene-4-monooxygenase system protein B (TmoB) MPE_RS04070 PF00355 Rieske [2Fe-2S] domain MPE_RS04075 PF02406 MmoB/DmpM family MPE_RS04080 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS04085 PF00175 Oxidoreductase NAD-binding domain MPE_RS04085 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS04085 PF00970 Oxidoreductase FAD-binding domain MPE_RS04090 PF00107 Zinc-binding dehydrogenase MPE_RS04090 PF13823 Alcohol dehydrogenase GroES-associated MPE_RS04090 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS04100 PF02203 Tar ligand binding domain homologue MPE_RS04100 PF00672 HAMP domain MPE_RS04100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS04120 PF00005 ABC transporter MPE_RS04125 PF01061 ABC-2 type transporter MPE_RS04135 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MPE_RS04140 PF01634 ATP phosphoribosyltransferase MPE_RS04145 PF00815 Histidinol dehydrogenase MPE_RS04150 PF00155 Aminotransferase class I and II MPE_RS04155 PF00475 Imidazoleglycerol-phosphate dehydratase MPE_RS04160 PF00117 Glutamine amidotransferase class-I MPE_RS04165 PF00977 Histidine biosynthesis protein MPE_RS04170 PF00977 Histidine biosynthesis protein MPE_RS04175 PF01502 Phosphoribosyl-AMP cyclohydrolase MPE_RS04180 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MPE_RS04190 PF01230 HIT domain MPE_RS04195 PF02416 mttA/Hcf106 family MPE_RS04200 PF02416 mttA/Hcf106 family MPE_RS04205 PF00902 Sec-independent protein translocase protein (TatC) MPE_RS04210 PF13180 PDZ domain MPE_RS04210 PF17820 PDZ domain MPE_RS04215 PF01784 NIF3 (NGG1p interacting factor 3) MPE_RS04220 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MPE_RS04230 PF01741 Large-conductance mechanosensitive channel, MscL MPE_RS04235 PF00355 Rieske [2Fe-2S] domain MPE_RS04235 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MPE_RS04240 PF00033 Cytochrome b/b6/petB MPE_RS04240 PF00032 Cytochrome b(C-terminal)/b6/petD MPE_RS04245 PF02167 Cytochrome C1 family MPE_RS04250 PF02798 Glutathione S-transferase, N-terminal domain MPE_RS04250 PF00043 Glutathione S-transferase, C-terminal domain MPE_RS04255 PF04386 Stringent starvation protein B MPE_RS04265 PF01609 Transposase DDE domain MPE_RS04265 PF05598 Transposase domain (DUF772) MPE_RS04280 PF04976 DMSO reductase anchor subunit (DmsC) MPE_RS04285 PF12800 4Fe-4S binding domain MPE_RS04285 PF13247 4Fe-4S dicluster domain MPE_RS04290 PF00384 Molybdopterin oxidoreductase MPE_RS04290 PF01568 Molydopterin dinucleotide binding domain MPE_RS04290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MPE_RS04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS04295 PF03466 LysR substrate binding domain MPE_RS04300 PF05995 Cysteine dioxygenase type I MPE_RS04320 PF00474 Sodium:solute symporter family MPE_RS04325 PF02321 Outer membrane efflux protein MPE_RS04330 PF00873 AcrB/AcrD/AcrF family MPE_RS04335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS04340 PF07859 alpha/beta hydrolase fold MPE_RS04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS04345 PF03466 LysR substrate binding domain MPE_RS04350 PF07690 Major Facilitator Superfamily MPE_RS04355 PF01037 Lrp/AsnC ligand binding domain MPE_RS04360 PF00456 Transketolase, thiamine diphosphate binding domain MPE_RS04360 PF17831 Pyruvate dehydrogenase E1 component middle domain MPE_RS04370 PF04209 homogentisate 1,2-dioxygenase MPE_RS04375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS04375 PF13360 PQQ-like domain MPE_RS04385 PF00108 Thiolase, N-terminal domain MPE_RS04385 PF02803 Thiolase, C-terminal domain MPE_RS04390 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPE_RS04390 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MPE_RS04390 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain MPE_RS04395 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS04440 PF07859 alpha/beta hydrolase fold MPE_RS04445 PF02515 CoA-transferase family III MPE_RS04450 PF17874 MalT-like TPR region MPE_RS04450 PF00196 Bacterial regulatory proteins, luxR family MPE_RS04455 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS04460 PF13193 AMP-binding enzyme C-terminal domain MPE_RS04460 PF00501 AMP-binding enzyme MPE_RS04465 PF00743 Flavin-binding monooxygenase-like MPE_RS04470 PF00561 alpha/beta hydrolase fold MPE_RS04475 PF17874 MalT-like TPR region MPE_RS04475 PF00196 Bacterial regulatory proteins, luxR family MPE_RS04485 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS04485 PF00107 Zinc-binding dehydrogenase MPE_RS04490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPE_RS04490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MPE_RS04495 PF00107 Zinc-binding dehydrogenase MPE_RS04495 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS04500 PF12833 Helix-turn-helix domain MPE_RS04500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term MPE_RS04505 PF01642 Methylmalonyl-CoA mutase MPE_RS04505 PF02310 B12 binding domain MPE_RS04515 PF13360 PQQ-like domain MPE_RS04515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS04520 PF02798 Glutathione S-transferase, N-terminal domain MPE_RS04520 PF00043 Glutathione S-transferase, C-terminal domain MPE_RS04525 PF13417 Glutathione S-transferase, N-terminal domain MPE_RS04530 PF00596 Class II Aldolase and Adducin N-terminal domain MPE_RS04555 PF00440 Bacterial regulatory proteins, tetR family MPE_RS04555 PF17932 Tetracyclin repressor-like, C-terminal domain MPE_RS04560 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS04560 PF00989 PAS fold MPE_RS04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS04565 PF00158 Sigma-54 interaction domain MPE_RS04565 PF00072 Response regulator receiver domain MPE_RS04565 PF02954 Bacterial regulatory protein, Fis family MPE_RS04580 PF00916 Sulfate permease family MPE_RS04580 PF01740 STAS domain MPE_RS04585 PF00355 Rieske [2Fe-2S] domain MPE_RS04595 PF00970 Oxidoreductase FAD-binding domain MPE_RS04595 PF00175 Oxidoreductase NAD-binding domain MPE_RS04595 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS04600 PF00355 Rieske [2Fe-2S] domain MPE_RS04610 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS04615 PF00005 ABC transporter MPE_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS04625 PF00005 ABC transporter MPE_RS04650 PF01209 ubiE/COQ5 methyltransferase family MPE_RS04660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS04665 PF16123 Hydroxyacylglutathione hydrolase C-terminus MPE_RS04665 PF00753 Metallo-beta-lactamase superfamily MPE_RS04670 PF08447 PAS fold MPE_RS04675 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS04675 PF00107 Zinc-binding dehydrogenase MPE_RS04715 PF14870 Photosynthesis system II assembly factor YCF48 MPE_RS04720 PF00732 GMC oxidoreductase MPE_RS04720 PF05199 GMC oxidoreductase MPE_RS04730 PF02492 CobW/HypB/UreG, nucleotide-binding domain MPE_RS04730 PF07683 Cobalamin synthesis protein cobW C-terminal domain MPE_RS04745 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS04750 PF00970 Oxidoreductase FAD-binding domain MPE_RS04750 PF00175 Oxidoreductase NAD-binding domain MPE_RS04750 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS04755 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS04760 PF02406 MmoB/DmpM family MPE_RS04765 PF00118 TCP-1/cpn60 chaperonin family MPE_RS04770 PF01566 Natural resistance-associated macrophage protein MPE_RS04775 PF13426 PAS domain MPE_RS04775 PF02954 Bacterial regulatory protein, Fis family MPE_RS04775 PF00158 Sigma-54 interaction domain MPE_RS04790 PF01565 FAD binding domain MPE_RS04790 PF02913 FAD linked oxidases, C-terminal domain MPE_RS04795 PF01565 FAD binding domain MPE_RS04800 PF13183 4Fe-4S dicluster domain MPE_RS04800 PF02754 Cysteine-rich domain MPE_RS04805 PF02830 V4R domain MPE_RS04805 PF06505 Activator of aromatic catabolism MPE_RS04805 PF02954 Bacterial regulatory protein, Fis family MPE_RS04805 PF00158 Sigma-54 interaction domain MPE_RS04810 PF00355 Rieske [2Fe-2S] domain MPE_RS04820 PF07044 Protein of unknown function (DUF1329) MPE_RS04835 PF00356 Bacterial regulatory proteins, lacI family MPE_RS04840 PF03401 Tripartite tricarboxylate transporter family receptor MPE_RS04845 PF13378 Enolase C-terminal domain-like MPE_RS04850 PF07729 FCD domain MPE_RS04850 PF00392 Bacterial regulatory proteins, gntR family MPE_RS04855 PF03401 Tripartite tricarboxylate transporter family receptor MPE_RS04860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MPE_RS04860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MPE_RS04865 PF03328 HpcH/HpaI aldolase/citrate lyase family MPE_RS04870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MPE_RS04870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MPE_RS04875 PF13660 Domain of unknown function (DUF4147) MPE_RS04875 PF05161 MOFRL family MPE_RS04880 PF01061 ABC-2 type transporter MPE_RS04885 PF00005 ABC transporter MPE_RS04905 PF01425 Amidase MPE_RS04910 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS04915 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS04920 PF03061 Thioesterase superfamily MPE_RS04925 PF14535 AMP-binding enzyme C-terminal domain MPE_RS04925 PF00501 AMP-binding enzyme MPE_RS04930 PF05138 Phenylacetic acid catabolic protein MPE_RS04935 PF06243 Phenylacetic acid degradation B MPE_RS04940 PF05138 Phenylacetic acid catabolic protein MPE_RS04945 PF01883 Iron-sulfur cluster assembly protein MPE_RS04950 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS04950 PF00175 Oxidoreductase NAD-binding domain MPE_RS04950 PF00970 Oxidoreductase FAD-binding domain MPE_RS04955 PF00440 Bacterial regulatory proteins, tetR family MPE_RS04960 PF00795 Carbon-nitrogen hydrolase MPE_RS04965 PF14525 AraC-binding-like domain MPE_RS04970 PF07690 Major Facilitator Superfamily MPE_RS04980 PF01699 Sodium/calcium exchanger protein MPE_RS04985 PF00563 EAL domain MPE_RS04985 PF01590 GAF domain MPE_RS04985 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS04985 PF00360 Phytochrome region MPE_RS04990 PF00005 ABC transporter MPE_RS04990 PF00664 ABC transporter transmembrane region MPE_RS05000 PF00355 Rieske [2Fe-2S] domain MPE_RS05005 PF00158 Sigma-54 interaction domain MPE_RS05005 PF02954 Bacterial regulatory protein, Fis family MPE_RS05005 PF06505 Activator of aromatic catabolism MPE_RS05005 PF02830 V4R domain MPE_RS05010 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS05010 PF00175 Oxidoreductase NAD-binding domain MPE_RS05015 PF00355 Rieske [2Fe-2S] domain MPE_RS05050 PF00583 Acetyltransferase (GNAT) family MPE_RS05050 PF13607 Succinyl-CoA ligase like flavodoxin domain MPE_RS05050 PF13380 CoA binding domain MPE_RS05060 PF07729 FCD domain MPE_RS05060 PF00392 Bacterial regulatory proteins, gntR family MPE_RS05065 PF02310 B12 binding domain MPE_RS05065 PF01642 Methylmalonyl-CoA mutase MPE_RS05075 PF01039 Carboxyl transferase domain MPE_RS05080 PF00289 Biotin carboxylase, N-terminal domain MPE_RS05080 PF00364 Biotin-requiring enzyme MPE_RS05080 PF18140 Propionyl-coenzyme A carboxylase BT domain MPE_RS05080 PF02785 Biotin carboxylase C-terminal domain MPE_RS05080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MPE_RS05090 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS05100 PF00005 ABC transporter MPE_RS05100 PF00664 ABC transporter transmembrane region MPE_RS05105 PF08245 Mur ligase middle domain MPE_RS05105 PF08443 RimK-like ATP-grasp domain MPE_RS05105 PF02875 Mur ligase family, glutamate ligase domain MPE_RS05110 PF08245 Mur ligase middle domain MPE_RS05110 PF02875 Mur ligase family, glutamate ligase domain MPE_RS05110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MPE_RS05115 PF04328 Selenoprotein, putative MPE_RS05120 PF02554 Carbon starvation protein CstA MPE_RS05120 PF13722 5TM C-terminal transporter carbon starvation CstA MPE_RS05125 PF00196 Bacterial regulatory proteins, luxR family MPE_RS05125 PF00072 Response regulator receiver domain MPE_RS05130 PF17200 Single Cache domain 2 MPE_RS05130 PF07730 Histidine kinase MPE_RS05145 PF01266 FAD dependent oxidoreductase MPE_RS05150 PF13401 AAA domain MPE_RS05150 PF01471 Putative peptidoglycan binding domain MPE_RS05175 PF00596 Class II Aldolase and Adducin N-terminal domain MPE_RS05180 PF00072 Response regulator receiver domain MPE_RS05180 PF00196 Bacterial regulatory proteins, luxR family MPE_RS05190 PF01863 Protein of unknown function DUF45 MPE_RS05200 PF02321 Outer membrane efflux protein MPE_RS05210 PF00873 AcrB/AcrD/AcrF family MPE_RS05215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS05220 PF17922 Tetracyclin repressor-like, C-terminal domain MPE_RS05220 PF00440 Bacterial regulatory proteins, tetR family MPE_RS05225 PF02673 Bacitracin resistance protein BacA MPE_RS05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS05230 PF03466 LysR substrate binding domain MPE_RS05255 PF13439 Glycosyltransferase Family 4 MPE_RS05265 PF01609 Transposase DDE domain MPE_RS05265 PF05598 Transposase domain (DUF772) MPE_RS05295 PF01527 Transposase MPE_RS05300 PF00665 Integrase core domain MPE_RS05300 PF13333 Integrase core domain MPE_RS05300 PF13276 HTH-like domain MPE_RS05330 PF02397 Bacterial sugar transferase MPE_RS05340 PF03109 ABC1 family MPE_RS05355 PF01336 OB-fold nucleic acid binding domain MPE_RS05355 PF00152 tRNA synthetases class II (D, K and N) MPE_RS05355 PF02938 GAD domain MPE_RS05360 PF00293 NUDIX domain MPE_RS05370 PF13091 PLD-like domain MPE_RS05375 PF01227 GTP cyclohydrolase I MPE_RS05385 PF00593 TonB dependent receptor MPE_RS05385 PF07715 TonB-dependent Receptor Plug Domain MPE_RS05415 PF00491 Arginase family MPE_RS05425 PF00899 ThiF family MPE_RS05430 PF03572 Peptidase family S41 MPE_RS05430 PF13180 PDZ domain MPE_RS05435 PF00005 ABC transporter MPE_RS05435 PF08402 TOBE domain MPE_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS05445 PF13356 Arm DNA-binding domain MPE_RS05445 PF00589 Phage integrase family MPE_RS05460 PF17243 POTRA domain TamA domain 1 MPE_RS05460 PF01103 Surface antigen MPE_RS05460 PF07244 Surface antigen variable number repeat MPE_RS05480 PF17862 AAA+ lid domain MPE_RS05480 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS05480 PF01434 Peptidase family M41 MPE_RS05485 PF00034 Cytochrome c MPE_RS05490 PF01966 HD domain MPE_RS05490 PF11871 Domain of unknown function (DUF3391) MPE_RS05505 PF03458 UPF0126 domain MPE_RS05515 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS05520 PF00501 AMP-binding enzyme MPE_RS05520 PF13193 AMP-binding enzyme C-terminal domain MPE_RS05535 PF00886 Ribosomal protein S16 MPE_RS05540 PF01782 RimM N-terminal domain MPE_RS05540 PF05239 PRC-barrel domain MPE_RS05545 PF01746 tRNA (Guanine-1)-methyltransferase MPE_RS05550 PF01245 Ribosomal protein L19 MPE_RS05555 PF00293 NUDIX domain MPE_RS05570 PF00206 Lyase MPE_RS05570 PF14698 Argininosuccinate lyase C-terminal MPE_RS05575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS05575 PF06580 Histidine kinase MPE_RS05580 PF00072 Response regulator receiver domain MPE_RS05580 PF04397 LytTr DNA-binding domain MPE_RS05585 PF01029 NusB family MPE_RS05585 PF01189 16S rRNA methyltransferase RsmB/F MPE_RS05590 PF13542 Helix-turn-helix domain of transposase family ISL3 MPE_RS05590 PF01610 Transposase MPE_RS05590 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 MPE_RS05595 PF00471 Ribosomal protein L33 MPE_RS05600 PF00830 Ribosomal L28 family MPE_RS05605 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS05610 PF13545 Crp-like helix-turn-helix domain MPE_RS05610 PF00027 Cyclic nucleotide-binding domain MPE_RS05615 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MPE_RS05615 PF09397 Ftsk gamma domain MPE_RS05615 PF01580 FtsK/SpoIIIE family MPE_RS05615 PF17854 FtsK alpha domain MPE_RS05620 PF03548 Outer membrane lipoprotein carrier protein LolA MPE_RS05625 PF12002 MgsA AAA+ ATPase C terminal MPE_RS05625 PF16193 AAA C-terminal domain MPE_RS05625 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS05630 PF02653 Branched-chain amino acid transport system / permease component MPE_RS05635 PF11862 Domain of unknown function (DUF3382) MPE_RS05635 PF02653 Branched-chain amino acid transport system / permease component MPE_RS05640 PF12399 Branched-chain amino acid ATP-binding cassette transporter MPE_RS05640 PF00005 ABC transporter MPE_RS05645 PF00005 ABC transporter MPE_RS05650 PF00970 Oxidoreductase FAD-binding domain MPE_RS05650 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS05650 PF00175 Oxidoreductase NAD-binding domain MPE_RS05660 PF17820 PDZ domain MPE_RS05660 PF13180 PDZ domain MPE_RS05680 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS05685 PF09297 NADH pyrophosphatase zinc ribbon domain MPE_RS05685 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain MPE_RS05685 PF00293 NUDIX domain MPE_RS05690 PF01206 Sulfurtransferase TusA MPE_RS05695 PF00483 Nucleotidyl transferase MPE_RS05705 PF08264 Anticodon-binding domain of tRNA MPE_RS05705 PF10458 Valyl tRNA synthetase tRNA binding arm MPE_RS05705 PF00133 tRNA synthetases class I (I, L, M and V) MPE_RS05725 PF07722 Peptidase C26 MPE_RS05730 PF00580 UvrD/REP helicase N-terminal domain MPE_RS05730 PF13361 UvrD-like helicase C-terminal domain MPE_RS05750 PF01636 Phosphotransferase enzyme family MPE_RS05760 PF01612 3'-5' exonuclease MPE_RS05760 PF00476 DNA polymerase family A MPE_RS05760 PF01367 5'-3' exonuclease, C-terminal SAM fold MPE_RS05760 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MPE_RS05770 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS05770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS05770 PF00072 Response regulator receiver domain MPE_RS05770 PF09456 RcsC Alpha-Beta-Loop (ABL) MPE_RS05775 PF00072 Response regulator receiver domain MPE_RS05775 PF00196 Bacterial regulatory proteins, luxR family MPE_RS05780 PF01575 MaoC like domain MPE_RS05785 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MPE_RS05795 PF02569 Pantoate-beta-alanine ligase MPE_RS05800 PF02548 Ketopantoate hydroxymethyltransferase MPE_RS05805 PF02616 Segregation and condensation protein ScpA MPE_RS05820 PF01740 STAS domain MPE_RS05820 PF00916 Sulfate permease family MPE_RS05825 PF01588 Putative tRNA binding domain MPE_RS05825 PF08264 Anticodon-binding domain of tRNA MPE_RS05825 PF09334 tRNA synthetases class I (M) MPE_RS05830 PF01590 GAF domain MPE_RS05830 PF00563 EAL domain MPE_RS05830 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS05830 PF00989 PAS fold MPE_RS05835 PF10609 NUBPL iron-transfer P-loop NTPase MPE_RS05860 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS05865 PF00158 Sigma-54 interaction domain MPE_RS05865 PF00072 Response regulator receiver domain MPE_RS05865 PF02954 Bacterial regulatory protein, Fis family MPE_RS05875 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MPE_RS05875 PF00384 Molybdopterin oxidoreductase MPE_RS05875 PF01568 Molydopterin dinucleotide binding domain MPE_RS05880 PF13247 4Fe-4S dicluster domain MPE_RS05905 PF02634 FdhD/NarQ family MPE_RS05910 PF00692 dUTPase MPE_RS05945 PF09397 Ftsk gamma domain MPE_RS05945 PF17854 FtsK alpha domain MPE_RS05945 PF01580 FtsK/SpoIIIE family MPE_RS05945 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MPE_RS05990 PF17762 HTH domain found in ParB protein MPE_RS05990 PF02195 ParB-like nuclease domain MPE_RS06015 PF03796 DnaB-like helicase C terminal domain MPE_RS06015 PF00772 DnaB-like helicase N terminal domain MPE_RS06045 PF00692 dUTPase MPE_RS06055 PF04228 Putative neutral zinc metallopeptidase MPE_RS06065 PF03918 Cytochrome C biogenesis protein MPE_RS06070 PF08534 Redoxin MPE_RS06075 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal MPE_RS06075 PF01578 Cytochrome C assembly protein MPE_RS06080 PF03100 CcmE MPE_RS06090 PF01578 Cytochrome C assembly protein MPE_RS06095 PF03379 CcmB protein MPE_RS06100 PF00005 ABC transporter MPE_RS06130 PF00578 AhpC/TSA family MPE_RS06170 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS06200 PF11799 impB/mucB/samB family C-terminal domain MPE_RS06200 PF00817 impB/mucB/samB family MPE_RS06210 PF09424 Yqey-like protein MPE_RS06215 PF01165 Ribosomal protein S21 MPE_RS06225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS06225 PF03466 LysR substrate binding domain MPE_RS06230 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS06230 PF00107 Zinc-binding dehydrogenase MPE_RS06240 PF13406 Transglycosylase SLT domain MPE_RS06245 PF13559 Domain of unknown function (DUF4129) MPE_RS06245 PF11992 Domain of unknown function (DUF3488) MPE_RS06245 PF01841 Transglutaminase-like superfamily MPE_RS06255 PF07726 ATPase family associated with various cellular activities (AAA) MPE_RS06255 PF17863 AAA lid domain MPE_RS06260 PF00850 Histone deacetylase domain MPE_RS06265 PF12794 Mechanosensitive ion channel inner membrane domain 1 MPE_RS06265 PF00924 Mechanosensitive ion channel MPE_RS06265 PF12795 Mechanosensitive ion channel porin domain MPE_RS06270 PF00672 HAMP domain MPE_RS06270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS06270 PF07730 Histidine kinase MPE_RS06275 PF00072 Response regulator receiver domain MPE_RS06275 PF00196 Bacterial regulatory proteins, luxR family MPE_RS06285 PF14765 Polyketide synthase dehydratase MPE_RS06285 PF00698 Acyl transferase domain MPE_RS06285 PF00550 Phosphopantetheine attachment site MPE_RS06285 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS06285 PF16197 Ketoacyl-synthetase C-terminal extension MPE_RS06285 PF00109 Beta-ketoacyl synthase, N-terminal domain MPE_RS06285 PF02801 Beta-ketoacyl synthase, C-terminal domain MPE_RS06285 PF08659 KR domain MPE_RS06290 PF01975 Survival protein SurE MPE_RS06300 PF01551 Peptidase family M23 MPE_RS06300 PF01476 LysM domain MPE_RS06305 PF04545 Sigma-70, region 4 MPE_RS06305 PF00140 Sigma-70 factor, region 1.2 MPE_RS06305 PF04542 Sigma-70 region 2 MPE_RS06305 PF04539 Sigma-70 region 3 MPE_RS06310 PF01938 TRAM domain MPE_RS06310 PF05958 tRNA (Uracil-5-)-methyltransferase MPE_RS06315 PF01027 Inhibitor of apoptosis-promoting Bax1 MPE_RS06320 PF03928 Haem-degrading MPE_RS06335 PF00210 Ferritin-like domain MPE_RS06340 PF00117 Glutamine amidotransferase class-I MPE_RS06340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MPE_RS06345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MPE_RS06345 PF02142 MGS-like domain MPE_RS06345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MPE_RS06350 PF03449 Transcription elongation factor, N-terminal MPE_RS06350 PF01272 Transcription elongation factor, GreA/GreB, C-term MPE_RS06365 PF01985 CRS1 / YhbY (CRM) domain MPE_RS06370 PF01728 FtsJ-like methyltransferase MPE_RS06375 PF17862 AAA+ lid domain MPE_RS06375 PF06480 FtsH Extracellular MPE_RS06375 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS06375 PF01434 Peptidase family M41 MPE_RS06380 PF00809 Pterin binding enzyme MPE_RS06385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MPE_RS06385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MPE_RS06385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MPE_RS06385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MPE_RS06390 PF02469 Fasciclin domain MPE_RS06395 PF12849 PBP superfamily domain MPE_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS06410 PF00005 ABC transporter MPE_RS06415 PF01895 PhoU domain MPE_RS06420 PF00486 Transcriptional regulatory protein, C terminal MPE_RS06420 PF00072 Response regulator receiver domain MPE_RS06425 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS06425 PF00989 PAS fold MPE_RS06425 PF11808 Phosphate regulon sensor protein PhoR MPE_RS06430 PF01554 MatE MPE_RS06440 PF01197 Ribosomal protein L31 MPE_RS06445 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MPE_RS06445 PF07498 Rho termination factor, N-terminal domain MPE_RS06445 PF07497 Rho termination factor, RNA-binding domain MPE_RS06450 PF00085 Thioredoxin MPE_RS06460 PF00580 UvrD/REP helicase N-terminal domain MPE_RS06460 PF13361 UvrD-like helicase C-terminal domain MPE_RS06460 PF12705 PD-(D/E)XK nuclease superfamily MPE_RS06465 PF01593 Flavin containing amine oxidoreductase MPE_RS06480 PF13533 Biotin-lipoyl like MPE_RS06485 PF00873 AcrB/AcrD/AcrF family MPE_RS06495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MPE_RS06495 PF05698 Bacterial trigger factor protein (TF) C-terminus MPE_RS06495 PF05697 Bacterial trigger factor protein (TF) MPE_RS06500 PF00574 Clp protease MPE_RS06505 PF10431 C-terminal, D2-small domain, of ClpB protein MPE_RS06505 PF06689 ClpX C4-type zinc finger MPE_RS06505 PF07724 AAA domain (Cdc48 subfamily) MPE_RS06510 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS06510 PF05362 Lon protease (S16) C-terminal proteolytic domain MPE_RS06510 PF02190 ATP-dependent protease La (LON) substrate-binding domain MPE_RS06525 PF01177 Asp/Glu/Hydantoin racemase MPE_RS06530 PF01012 Electron transfer flavoprotein domain MPE_RS06535 PF01012 Electron transfer flavoprotein domain MPE_RS06535 PF00766 Electron transfer flavoprotein FAD-binding domain MPE_RS06540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS06540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS06540 PF12806 Acetyl-CoA dehydrogenase C-terminal like MPE_RS06540 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS06550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MPE_RS06550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MPE_RS06565 PF01810 LysE type translocator MPE_RS06575 PF07311 Dodecin MPE_RS06620 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MPE_RS06620 PF00749 tRNA synthetases class I (E and Q), catalytic domain MPE_RS06645 PF07977 FabA-like domain MPE_RS06665 PF01522 Polysaccharide deacetylase MPE_RS06665 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain MPE_RS06670 PF02801 Beta-ketoacyl synthase, C-terminal domain MPE_RS06670 PF00109 Beta-ketoacyl synthase, N-terminal domain MPE_RS06685 PF00106 short chain dehydrogenase MPE_RS06710 PF04820 Tryptophan halogenase MPE_RS06715 PF01209 ubiE/COQ5 methyltransferase family MPE_RS06720 PF13533 Biotin-lipoyl like MPE_RS06725 PF00873 AcrB/AcrD/AcrF family MPE_RS06730 PF05872 Bacterial protein of unknown function (DUF853) MPE_RS06735 PF01709 Transcriptional regulator MPE_RS06740 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MPE_RS06740 PF02843 Phosphoribosylglycinamide synthetase, C domain MPE_RS06740 PF02844 Phosphoribosylglycinamide synthetase, N domain MPE_RS06745 PF01218 Coproporphyrinogen III oxidase MPE_RS06750 PF01467 Cytidylyltransferase-like MPE_RS06760 PF02590 Predicted SPOUT methyltransferase MPE_RS06765 PF02545 Maf-like protein MPE_RS06770 PF10150 Ribonuclease E/G family MPE_RS06770 PF00575 S1 RNA binding domain MPE_RS06775 PF04052 TolB amino-terminal domain MPE_RS06775 PF07676 WD40-like Beta Propeller Repeat MPE_RS06780 PF00691 OmpA family MPE_RS06790 PF00899 ThiF family MPE_RS06830 PF04304 Protein of unknown function (DUF454) MPE_RS06840 PF03960 ArsC family MPE_RS06845 PF00330 Aconitase family (aconitate hydratase) MPE_RS06845 PF00694 Aconitase C-terminal domain MPE_RS06850 PF01068 ATP dependent DNA ligase domain MPE_RS06850 PF14743 DNA ligase OB-like domain MPE_RS06855 PF00929 Exonuclease MPE_RS06855 PF08411 Exonuclease C-terminal MPE_RS06860 PF08546 Ketopantoate reductase PanE/ApbA C terminal MPE_RS06860 PF02558 Ketopantoate reductase PanE/ApbA MPE_RS06870 PF11791 Aconitate B N-terminal domain MPE_RS06870 PF06434 Aconitate hydratase 2 N-terminus MPE_RS06870 PF00330 Aconitase family (aconitate hydratase) MPE_RS06895 PF05661 Protein of unknown function (DUF808) MPE_RS06900 PF00816 H-NS histone family MPE_RS06905 PF13416 Bacterial extracellular solute-binding protein MPE_RS06910 PF04362 Bacterial Fe(2+) trafficking MPE_RS06915 PF00583 Acetyltransferase (GNAT) family MPE_RS06915 PF00696 Amino acid kinase family MPE_RS06920 PF00270 DEAD/DEAH box helicase MPE_RS06920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MPE_RS06920 PF00271 Helicase conserved C-terminal domain MPE_RS06920 PF04408 Helicase associated domain (HA2) MPE_RS06920 PF11898 Domain of unknown function (DUF3418) MPE_RS06935 PF01627 Hpt domain MPE_RS06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS06935 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS06935 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS06935 PF00072 Response regulator receiver domain MPE_RS06935 PF00989 PAS fold MPE_RS06950 PF03781 Sulfatase-modifying factor enzyme 1 MPE_RS06950 PF12867 DinB superfamily MPE_RS06955 PF10017 Histidine-specific methyltransferase, SAM-dependent MPE_RS06975 PF03350 Uncharacterized protein family, UPF0114 MPE_RS06980 PF13193 AMP-binding enzyme C-terminal domain MPE_RS06980 PF00501 AMP-binding enzyme MPE_RS06980 PF16177 Acetyl-coenzyme A synthetase N-terminus MPE_RS06985 PF00034 Cytochrome c MPE_RS06995 PF00920 Dehydratase family MPE_RS07000 PF03466 LysR substrate binding domain MPE_RS07000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS07005 PF01790 Prolipoprotein diacylglyceryl transferase MPE_RS07010 PF00005 ABC transporter MPE_RS07015 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS07025 PF08376 Nitrate and nitrite sensing MPE_RS07025 PF03861 ANTAR domain MPE_RS07035 PF00814 Glycoprotease family MPE_RS07040 PF00011 Hsp20/alpha crystallin family MPE_RS07045 PF00155 Aminotransferase class I and II MPE_RS07050 PF00312 Ribosomal protein S15 MPE_RS07055 PF00013 KH domain MPE_RS07055 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MPE_RS07055 PF01138 3' exoribonuclease family, domain 1 MPE_RS07055 PF03725 3' exoribonuclease family, domain 2 MPE_RS07055 PF00575 S1 RNA binding domain MPE_RS07060 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS07060 PF08659 KR domain MPE_RS07060 PF00698 Acyl transferase domain MPE_RS07060 PF14765 Polyketide synthase dehydratase MPE_RS07060 PF00550 Phosphopantetheine attachment site MPE_RS07065 PF00121 Triosephosphate isomerase MPE_RS07070 PF03840 Preprotein translocase SecG subunit MPE_RS07080 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MPE_RS07085 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MPE_RS07090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MPE_RS07095 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MPE_RS07105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MPE_RS07105 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MPE_RS07105 PF10531 SLBB domain MPE_RS07110 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MPE_RS07110 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal MPE_RS07110 PF00384 Molybdopterin oxidoreductase MPE_RS07115 PF00146 NADH dehydrogenase MPE_RS07120 PF12838 4Fe-4S dicluster domain MPE_RS07125 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MPE_RS07130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MPE_RS07135 PF00361 Proton-conducting membrane transporter MPE_RS07135 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MPE_RS07140 PF00361 Proton-conducting membrane transporter MPE_RS07140 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus MPE_RS07145 PF00361 Proton-conducting membrane transporter MPE_RS07155 PF00293 NUDIX domain MPE_RS07165 PF02913 FAD linked oxidases, C-terminal domain MPE_RS07165 PF01565 FAD binding domain MPE_RS07175 PF03631 Virulence factor BrkB MPE_RS07190 PF01264 Chorismate synthase MPE_RS07205 PF01523 Putative modulator of DNA gyrase MPE_RS07210 PF03313 Serine dehydratase alpha chain MPE_RS07210 PF03315 Serine dehydratase beta chain MPE_RS07215 PF01212 Beta-eliminating lyase MPE_RS07220 PF02347 Glycine cleavage system P-protein MPE_RS07225 PF01597 Glycine cleavage H-protein MPE_RS07230 PF01571 Aminomethyltransferase folate-binding domain MPE_RS07230 PF08669 Glycine cleavage T-protein C-terminal barrel domain MPE_RS07235 PF00563 EAL domain MPE_RS07235 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS07235 PF03707 Bacterial signalling protein N terminal repeat MPE_RS07240 PF00501 AMP-binding enzyme MPE_RS07240 PF13193 AMP-binding enzyme C-terminal domain MPE_RS07245 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS07270 PF00144 Beta-lactamase MPE_RS07275 PF16884 N-terminal domain of oxidoreductase MPE_RS07275 PF00107 Zinc-binding dehydrogenase MPE_RS07310 PF04337 Protein of unknown function, DUF480 MPE_RS07330 PF13439 Glycosyltransferase Family 4 MPE_RS07330 PF00534 Glycosyl transferases group 1 MPE_RS07335 PF07690 Major Facilitator Superfamily MPE_RS07340 PF00072 Response regulator receiver domain MPE_RS07340 PF00196 Bacterial regulatory proteins, luxR family MPE_RS07345 PF01144 Coenzyme A transferase MPE_RS07350 PF01144 Coenzyme A transferase MPE_RS07385 PF00665 Integrase core domain MPE_RS07390 PF01695 IstB-like ATP binding protein MPE_RS07395 PF00202 Aminotransferase class-III MPE_RS07400 PF03466 LysR substrate binding domain MPE_RS07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS07405 PF04376 Arginine-tRNA-protein transferase, N terminus MPE_RS07405 PF04377 Arginine-tRNA-protein transferase, C terminus MPE_RS07410 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MPE_RS07420 PF07664 Ferrous iron transport protein B C terminus MPE_RS07420 PF07670 Nucleoside recognition MPE_RS07420 PF02421 Ferrous iron transport protein B MPE_RS07440 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS07440 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding MPE_RS07440 PF10518 TAT (twin-arginine translocation) pathway signal sequence MPE_RS07445 PF00034 Cytochrome c MPE_RS07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS07450 PF03466 LysR substrate binding domain MPE_RS07455 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MPE_RS07455 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MPE_RS07460 PF00101 Ribulose bisphosphate carboxylase, small chain MPE_RS07465 PF17866 AAA lid domain MPE_RS07465 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS07470 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MPE_RS07475 PF00485 Phosphoribulokinase / Uridine kinase family MPE_RS07480 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS07485 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS07490 PF04143 Sulphur transport MPE_RS07515 PF03922 OmpW family MPE_RS07540 PF07715 TonB-dependent Receptor Plug Domain MPE_RS07540 PF00593 TonB dependent receptor MPE_RS07545 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS07550 PF11953 Domain of unknown function (DUF3470) MPE_RS07550 PF00037 4Fe-4S binding domain MPE_RS07555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MPE_RS07560 PF00009 Elongation factor Tu GTP binding domain MPE_RS07565 PF01507 Phosphoadenosine phosphosulfate reductase family MPE_RS07570 PF01507 Phosphoadenosine phosphosulfate reductase family MPE_RS07585 PF01925 Sulfite exporter TauE/SafE MPE_RS07590 PF01734 Patatin-like phospholipase MPE_RS07595 PF09361 Phasin protein MPE_RS07600 PF00850 Histone deacetylase domain MPE_RS07605 PF03061 Thioesterase superfamily MPE_RS07610 PF02423 Ornithine cyclodeaminase/mu-crystallin family MPE_RS07620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MPE_RS07620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MPE_RS07625 PF07715 TonB-dependent Receptor Plug Domain MPE_RS07625 PF00593 TonB dependent receptor MPE_RS07625 PF07660 Secretin and TonB N terminus short domain MPE_RS07630 PF01292 Prokaryotic cytochrome b561 MPE_RS07635 PF02646 RmuC family MPE_RS07650 PF08494 DEAD/H associated MPE_RS07650 PF00271 Helicase conserved C-terminal domain MPE_RS07650 PF00270 DEAD/DEAH box helicase MPE_RS07655 PF04679 ATP dependent DNA ligase C terminal region MPE_RS07655 PF01068 ATP dependent DNA ligase domain MPE_RS07655 PF04675 DNA ligase N terminus MPE_RS07660 PF04675 DNA ligase N terminus MPE_RS07660 PF04679 ATP dependent DNA ligase C terminal region MPE_RS07660 PF01068 ATP dependent DNA ligase domain MPE_RS07665 PF03618 Kinase/pyrophosphorylase MPE_RS07670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MPE_RS07670 PF02896 PEP-utilising enzyme, TIM barrel domain MPE_RS07670 PF00391 PEP-utilising enzyme, mobile domain MPE_RS07690 PF00474 Sodium:solute symporter family MPE_RS07695 PF01250 Ribosomal protein S6 MPE_RS07705 PF01084 Ribosomal protein S18 MPE_RS07710 PF01281 Ribosomal protein L9, N-terminal domain MPE_RS07710 PF03948 Ribosomal protein L9, C-terminal domain MPE_RS07715 PF00772 DnaB-like helicase N terminal domain MPE_RS07715 PF03796 DnaB-like helicase C terminal domain MPE_RS07730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MPE_RS07730 PF07733 Bacterial DNA polymerase III alpha NTPase domain MPE_RS07730 PF14579 Helix-hairpin-helix motif MPE_RS07730 PF02811 PHP domain MPE_RS07750 PF00108 Thiolase, N-terminal domain MPE_RS07750 PF02803 Thiolase, C-terminal domain MPE_RS07755 PF02562 PhoH-like protein MPE_RS07755 PF13638 PIN domain MPE_RS07760 PF00578 AhpC/TSA family MPE_RS07770 PF00155 Aminotransferase class I and II MPE_RS07775 PF01842 ACT domain MPE_RS07775 PF00742 Homoserine dehydrogenase MPE_RS07775 PF03447 Homoserine dehydrogenase, NAD binding domain MPE_RS07780 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS07780 PF14821 Threonine synthase N terminus MPE_RS07785 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MPE_RS07790 PF00994 Probable molybdopterin binding domain MPE_RS07790 PF03454 MoeA C-terminal region (domain IV) MPE_RS07790 PF03453 MoeA N-terminal region (domain I and II) MPE_RS07800 PF03793 PASTA domain MPE_RS07800 PF00069 Protein kinase domain MPE_RS07805 PF02391 MoaE protein MPE_RS07810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MPE_RS07815 PF17871 AAA lid domain MPE_RS07815 PF07724 AAA domain (Cdc48 subfamily) MPE_RS07815 PF02861 Clp amino terminal domain, pathogenicity island component MPE_RS07815 PF10431 C-terminal, D2-small domain, of ClpB protein MPE_RS07815 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS07825 PF02910 Fumarate reductase flavoprotein C-term MPE_RS07825 PF00890 FAD binding domain MPE_RS07835 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MPE_RS07835 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MPE_RS07840 PF02445 Quinolinate synthetase A protein MPE_RS07850 PF07690 Major Facilitator Superfamily MPE_RS07855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MPE_RS07855 PF00205 Thiamine pyrophosphate enzyme, central domain MPE_RS07855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MPE_RS07865 PF00892 EamA-like transporter family MPE_RS07870 PF01037 Lrp/AsnC ligand binding domain MPE_RS07875 PF03737 Aldolase/RraA MPE_RS07880 PF03706 Lysylphosphatidylglycerol synthase TM region MPE_RS07880 PF09924 Uncharacterised conserved protein (DUF2156) MPE_RS07915 PF17757 UvrB interaction domain MPE_RS07915 PF03461 TRCF domain MPE_RS07915 PF00271 Helicase conserved C-terminal domain MPE_RS07915 PF02559 CarD-like/TRCF domain MPE_RS07915 PF00270 DEAD/DEAH box helicase MPE_RS07920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MPE_RS07920 PF02542 YgbB family MPE_RS07925 PF02542 YgbB family MPE_RS07930 PF03976 Polyphosphate kinase 2 (PPK2) MPE_RS07935 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS07935 PF00672 HAMP domain MPE_RS07940 PF00072 Response regulator receiver domain MPE_RS07940 PF00486 Transcriptional regulatory protein, C terminal MPE_RS07950 PF00106 short chain dehydrogenase MPE_RS07960 PF13291 ACT domain MPE_RS07960 PF04607 Region found in RelA / SpoT proteins MPE_RS07960 PF02824 TGS domain MPE_RS07975 PF00199 Catalase MPE_RS07980 PF03358 NADPH-dependent FMN reductase MPE_RS07985 PF01758 Sodium Bile acid symporter family MPE_RS08005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MPE_RS08005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MPE_RS08025 PF13360 PQQ-like domain MPE_RS08025 PF01011 PQQ enzyme repeat MPE_RS08030 PF13609 Gram-negative porin MPE_RS08040 PF01011 PQQ enzyme repeat MPE_RS08045 PF13360 PQQ-like domain MPE_RS08045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS08055 PF02769 AIR synthase related protein, C-terminal domain MPE_RS08055 PF00586 AIR synthase related protein, N-terminal domain MPE_RS08060 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MPE_RS08060 PF04055 Radical SAM superfamily MPE_RS08070 PF00561 alpha/beta hydrolase fold MPE_RS08070 PF00364 Biotin-requiring enzyme MPE_RS08075 PF02780 Transketolase, C-terminal domain MPE_RS08075 PF02779 Transketolase, pyrimidine binding domain MPE_RS08080 PF00676 Dehydrogenase E1 component MPE_RS08085 PF01513 ATP-NAD kinase MPE_RS08090 PF08534 Redoxin MPE_RS08100 PF08543 Phosphomethylpyrimidine kinase MPE_RS08105 PF05690 Thiazole biosynthesis protein ThiG MPE_RS08110 PF02597 ThiS family MPE_RS08115 PF01266 FAD dependent oxidoreductase MPE_RS08120 PF13667 ThiC-associated domain MPE_RS08120 PF01964 Radical SAM ThiC family MPE_RS08125 PF01590 GAF domain MPE_RS08125 PF00158 Sigma-54 interaction domain MPE_RS08125 PF02954 Bacterial regulatory protein, Fis family MPE_RS08130 PF05233 PHB accumulation regulatory domain MPE_RS08130 PF07879 PHB/PHA accumulation regulator DNA-binding domain MPE_RS08135 PF04055 Radical SAM superfamily MPE_RS08135 PF00919 Uncharacterized protein family UPF0004 MPE_RS08135 PF18693 TRAM domain MPE_RS08140 PF01053 Cys/Met metabolism PLP-dependent enzyme MPE_RS08145 PF01668 SmpB protein MPE_RS08150 PF03364 Polyketide cyclase / dehydrase and lipid transport MPE_RS08155 PF03658 RnfH family Ubiquitin MPE_RS08165 PF00478 IMP dehydrogenase / GMP reductase domain MPE_RS08165 PF00571 CBS domain MPE_RS08170 PF07690 Major Facilitator Superfamily MPE_RS08175 PF00958 GMP synthase C terminal domain MPE_RS08175 PF00117 Glutamine amidotransferase class-I MPE_RS08175 PF02540 NAD synthase MPE_RS08180 PF00589 Phage integrase family MPE_RS08180 PF13356 Arm DNA-binding domain MPE_RS08180 PF14659 Phage integrase, N-terminal SAM-like domain MPE_RS08195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS08200 PF00873 AcrB/AcrD/AcrF family MPE_RS08210 PF00072 Response regulator receiver domain MPE_RS08210 PF00486 Transcriptional regulatory protein, C terminal MPE_RS08215 PF00672 HAMP domain MPE_RS08215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS08215 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS08225 PF07731 Multicopper oxidase MPE_RS08225 PF00394 Multicopper oxidase MPE_RS08225 PF07732 Multicopper oxidase MPE_RS08250 PF00376 MerR family regulatory protein MPE_RS08250 PF09278 MerR, DNA binding MPE_RS08255 PF00403 Heavy-metal-associated domain MPE_RS08290 PF02600 Disulfide bond formation protein DsbB MPE_RS08300 PF00873 AcrB/AcrD/AcrF family MPE_RS08335 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MPE_RS08340 PF13411 MerR HTH family regulatory protein MPE_RS08345 PF04002 RadC-like JAB domain MPE_RS08360 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MPE_RS08365 PF00376 MerR family regulatory protein MPE_RS08365 PF09278 MerR, DNA binding MPE_RS08370 PF02411 MerT mercuric transport protein MPE_RS08375 PF00403 Heavy-metal-associated domain MPE_RS08380 PF00436 Single-strand binding protein family MPE_RS08385 PF06067 Domain of unknown function (DUF932) MPE_RS08420 PF00271 Helicase conserved C-terminal domain MPE_RS08440 PF05736 OprF membrane domain MPE_RS08440 PF00691 OmpA family MPE_RS08445 PF02534 Type IV secretory system Conjugative DNA transfer MPE_RS08450 PF00437 Type II/IV secretion system protein MPE_RS08455 PF03743 Bacterial conjugation TrbI-like protein MPE_RS08460 PF03524 Conjugal transfer protein MPE_RS08490 PF00072 Response regulator receiver domain MPE_RS08490 PF00196 Bacterial regulatory proteins, luxR family MPE_RS08495 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MPE_RS08495 PF00672 HAMP domain MPE_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS08495 PF07730 Histidine kinase MPE_RS08500 PF01814 Hemerythrin HHE cation binding domain MPE_RS08515 PF00027 Cyclic nucleotide-binding domain MPE_RS08515 PF13545 Crp-like helix-turn-helix domain MPE_RS08540 PF02203 Tar ligand binding domain homologue MPE_RS08540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS08540 PF00672 HAMP domain MPE_RS08560 PF01883 Iron-sulfur cluster assembly protein MPE_RS08575 PF00484 Carbonic anhydrase MPE_RS08585 PF02665 Nitrate reductase gamma subunit MPE_RS08590 PF02613 Nitrate reductase delta subunit MPE_RS08595 PF14711 Respiratory nitrate reductase beta C-terminal MPE_RS08595 PF13247 4Fe-4S dicluster domain MPE_RS08600 PF14710 Respiratory nitrate reductase alpha N-terminal MPE_RS08600 PF01568 Molydopterin dinucleotide binding domain MPE_RS08600 PF00384 Molybdopterin oxidoreductase MPE_RS08605 PF07690 Major Facilitator Superfamily MPE_RS08610 PF07690 Major Facilitator Superfamily MPE_RS08615 PF07690 Major Facilitator Superfamily MPE_RS08635 PF01699 Sodium/calcium exchanger protein MPE_RS08660 PF00149 Calcineurin-like phosphoesterase MPE_RS08670 PF03350 Uncharacterized protein family, UPF0114 MPE_RS08685 PF01027 Inhibitor of apoptosis-promoting Bax1 MPE_RS08700 PF02899 Phage integrase, N-terminal SAM-like domain MPE_RS08700 PF00589 Phage integrase family MPE_RS08710 PF00117 Glutamine amidotransferase class-I MPE_RS08720 PF01494 FAD binding domain MPE_RS08725 PF00486 Transcriptional regulatory protein, C terminal MPE_RS08740 PF07715 TonB-dependent Receptor Plug Domain MPE_RS08740 PF00593 TonB dependent receptor MPE_RS08750 PF00072 Response regulator receiver domain MPE_RS08755 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS08755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS08755 PF08521 Two-component sensor kinase N-terminal MPE_RS08765 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MPE_RS08770 PF00510 Cytochrome c oxidase subunit III MPE_RS08775 PF00115 Cytochrome C and Quinol oxidase polypeptide I MPE_RS08780 PF06481 COX Aromatic Rich Motif MPE_RS08780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MPE_RS08785 PF07690 Major Facilitator Superfamily MPE_RS08785 PF00083 Sugar (and other) transporter MPE_RS08790 PF00248 Aldo/keto reductase family MPE_RS08800 PF14437 MafB19-like deaminase MPE_RS08805 PF02016 LD-carboxypeptidase N-terminal domain MPE_RS08805 PF17676 LD-carboxypeptidase C-terminal domain MPE_RS08810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MPE_RS08815 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS08820 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS08820 PF12911 N-terminal TM domain of oligopeptide transport permease C MPE_RS08825 PF00005 ABC transporter MPE_RS08825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MPE_RS08830 PF00593 TonB dependent receptor MPE_RS08830 PF07715 TonB-dependent Receptor Plug Domain MPE_RS08835 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS08840 PF02472 Biopolymer transport protein ExbD/TolR MPE_RS08845 PF02472 Biopolymer transport protein ExbD/TolR MPE_RS08855 PF01966 HD domain MPE_RS08855 PF01909 Nucleotidyltransferase domain MPE_RS08855 PF08335 GlnD PII-uridylyltransferase MPE_RS08860 PF00557 Metallopeptidase family M24 MPE_RS08865 PF02769 AIR synthase related protein, C-terminal domain MPE_RS08865 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MPE_RS08865 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MPE_RS08875 PF07690 Major Facilitator Superfamily MPE_RS08890 PF04279 Intracellular septation protein A MPE_RS08895 PF01641 SelR domain MPE_RS08900 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MPE_RS08905 PF00501 AMP-binding enzyme MPE_RS08905 PF13193 AMP-binding enzyme C-terminal domain MPE_RS08915 PF02653 Branched-chain amino acid transport system / permease component MPE_RS08925 PF12399 Branched-chain amino acid ATP-binding cassette transporter MPE_RS08925 PF00005 ABC transporter MPE_RS08930 PF00005 ABC transporter MPE_RS08935 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPE_RS08935 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MPE_RS08935 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS08940 PF00108 Thiolase, N-terminal domain MPE_RS08940 PF02803 Thiolase, C-terminal domain MPE_RS08945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS08945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS08945 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS08945 PF12806 Acetyl-CoA dehydrogenase C-terminal like MPE_RS08970 PF00107 Zinc-binding dehydrogenase MPE_RS08970 PF16884 N-terminal domain of oxidoreductase MPE_RS08985 PF00106 short chain dehydrogenase MPE_RS08995 PF06968 Biotin and Thiamin Synthesis associated domain MPE_RS08995 PF04055 Radical SAM superfamily MPE_RS09005 PF03741 Integral membrane protein TerC family MPE_RS09020 PF04349 Periplasmic glucan biosynthesis protein, MdoG MPE_RS09025 PF17674 HHH domain MPE_RS09025 PF09371 Tex-like protein N-terminal domain MPE_RS09025 PF16921 Tex protein YqgF-like domain MPE_RS09025 PF00575 S1 RNA binding domain MPE_RS09030 PF00535 Glycosyl transferase family 2 MPE_RS09035 PF04349 Periplasmic glucan biosynthesis protein, MdoG MPE_RS09055 PF00465 Iron-containing alcohol dehydrogenase MPE_RS09060 PF07859 alpha/beta hydrolase fold MPE_RS09075 PF12848 ABC transporter MPE_RS09075 PF00005 ABC transporter MPE_RS09080 PF05175 Methyltransferase small domain MPE_RS09085 PF07687 Peptidase dimerisation domain MPE_RS09085 PF01546 Peptidase family M20/M25/M40 MPE_RS09090 PF00437 Type II/IV secretion system protein MPE_RS09095 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MPE_RS09095 PF14602 Hexapeptide repeat of succinyl-transferase MPE_RS09095 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS09100 PF00155 Aminotransferase class I and II MPE_RS09105 PF01047 MarR family MPE_RS09110 PF14489 QueF-like protein MPE_RS09115 PF06470 SMC proteins Flexible Hinge Domain MPE_RS09115 PF02463 RecF/RecN/SMC N terminal domain MPE_RS09125 PF03120 NAD-dependent DNA ligase OB-fold domain MPE_RS09125 PF00533 BRCA1 C Terminus (BRCT) domain MPE_RS09125 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MPE_RS09125 PF12826 Helix-hairpin-helix motif MPE_RS09125 PF01653 NAD-dependent DNA ligase adenylation domain MPE_RS09130 PF01327 Polypeptide deformylase MPE_RS09140 PF13472 GDSL-like Lipase/Acylhydrolase family MPE_RS09145 PF00005 ABC transporter MPE_RS09150 PF08032 RNA 2'-O ribose methyltransferase substrate binding MPE_RS09150 PF00588 SpoU rRNA Methylase family MPE_RS09160 PF07690 Major Facilitator Superfamily MPE_RS09165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MPE_RS09165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MPE_RS09165 PF01842 ACT domain MPE_RS09175 PF01804 Penicillin amidase MPE_RS09195 PF00005 ABC transporter MPE_RS09215 PF01654 Cytochrome bd terminal oxidase subunit I MPE_RS09220 PF02322 Cytochrome bd terminal oxidase subunit II MPE_RS09225 PF00355 Rieske [2Fe-2S] domain MPE_RS09225 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MPE_RS09350 PF01026 TatD related DNase MPE_RS09365 PF02223 Thymidylate kinase MPE_RS09370 PF02618 YceG-like family MPE_RS09375 PF01571 Aminomethyltransferase folate-binding domain MPE_RS09390 PF17763 Glutaminase/Asparaginase C-terminal domain MPE_RS09390 PF00710 Asparaginase, N-terminal MPE_RS09395 PF00717 Peptidase S24-like MPE_RS09395 PF01726 LexA DNA binding domain MPE_RS09405 PF00106 short chain dehydrogenase MPE_RS09410 PF02803 Thiolase, C-terminal domain MPE_RS09410 PF00108 Thiolase, N-terminal domain MPE_RS09415 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MPE_RS09420 PF02578 Multi-copper polyphenol oxidoreductase laccase MPE_RS09425 PF14497 Glutathione S-transferase, C-terminal domain MPE_RS09425 PF02798 Glutathione S-transferase, N-terminal domain MPE_RS09430 PF01557 Fumarylacetoacetate (FAA) hydrolase family MPE_RS09435 PF00293 NUDIX domain MPE_RS09435 PF09297 NADH pyrophosphatase zinc ribbon domain MPE_RS09440 PF00664 ABC transporter transmembrane region MPE_RS09440 PF03412 Peptidase C39 family MPE_RS09440 PF00005 ABC transporter MPE_RS09445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS09445 PF00529 HlyD membrane-fusion protein of T1SS MPE_RS09465 PF02321 Outer membrane efflux protein MPE_RS09480 PF00216 Bacterial DNA-binding protein MPE_RS09485 PF03147 Ferredoxin-fold anticodon binding domain MPE_RS09485 PF01588 Putative tRNA binding domain MPE_RS09485 PF03483 B3/4 domain MPE_RS09485 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MPE_RS09485 PF03484 tRNA synthetase B5 domain MPE_RS09490 PF01409 tRNA synthetases class II core domain (F) MPE_RS09490 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MPE_RS09495 PF00453 Ribosomal protein L20 MPE_RS09500 PF01632 Ribosomal protein L35 MPE_RS09505 PF00707 Translation initiation factor IF-3, C-terminal domain MPE_RS09505 PF05198 Translation initiation factor IF-3, N-terminal domain MPE_RS09510 PF03129 Anticodon binding domain MPE_RS09510 PF02824 TGS domain MPE_RS09510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MPE_RS09510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MPE_RS09515 PF00463 Isocitrate lyase family MPE_RS09520 PF00491 Arginase family MPE_RS09550 PF17863 AAA lid domain MPE_RS09550 PF07726 ATPase family associated with various cellular activities (AAA) MPE_RS09555 PF01037 Lrp/AsnC ligand binding domain MPE_RS09560 PF00202 Aminotransferase class-III MPE_RS09565 PF01266 FAD dependent oxidoreductase MPE_RS09570 PF07722 Peptidase C26 MPE_RS09575 PF00120 Glutamine synthetase, catalytic domain MPE_RS09580 PF00202 Aminotransferase class-III MPE_RS09585 PF13416 Bacterial extracellular solute-binding protein MPE_RS09590 PF00005 ABC transporter MPE_RS09590 PF08402 TOBE domain MPE_RS09595 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS09600 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS09615 PF00171 Aldehyde dehydrogenase family MPE_RS09620 PF00202 Aminotransferase class-III MPE_RS09625 PF00120 Glutamine synthetase, catalytic domain MPE_RS09635 PF17763 Glutaminase/Asparaginase C-terminal domain MPE_RS09635 PF00710 Asparaginase, N-terminal MPE_RS09640 PF16363 GDP-mannose 4,6 dehydratase MPE_RS09650 PF01207 Dihydrouridine synthase (Dus) MPE_RS09660 PF03144 Elongation factor Tu domain 2 MPE_RS09660 PF00009 Elongation factor Tu GTP binding domain MPE_RS09660 PF00679 Elongation factor G C-terminus MPE_RS09665 PF16198 tRNA pseudouridylate synthase B C-terminal domain MPE_RS09665 PF09157 Pseudouridine synthase II TruB, C-terminal MPE_RS09665 PF01509 TruB family pseudouridylate synthase (N terminal domain) MPE_RS09670 PF02033 Ribosome-binding factor A MPE_RS09675 PF00009 Elongation factor Tu GTP binding domain MPE_RS09675 PF04760 Translation initiation factor IF-2, N-terminal region MPE_RS09675 PF08364 Bacterial translation initiation factor IF-2 associated region MPE_RS09675 PF11987 Translation-initiation factor 2 MPE_RS09680 PF13184 NusA-like KH domain MPE_RS09680 PF08529 NusA N-terminal domain MPE_RS09685 PF17384 RimP C-terminal SH3 domain MPE_RS09685 PF02576 RimP N-terminal domain MPE_RS09695 PF01276 Orn/Lys/Arg decarboxylase, major domain MPE_RS09695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MPE_RS09695 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MPE_RS09705 PF01145 SPFH domain / Band 7 family MPE_RS09730 PF00107 Zinc-binding dehydrogenase MPE_RS09730 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS09770 PF13458 Periplasmic binding protein MPE_RS09780 PF00883 Cytosol aminopeptidase family, catalytic domain MPE_RS09780 PF02789 Cytosol aminopeptidase family, N-terminal domain MPE_RS09800 PF03466 LysR substrate binding domain MPE_RS09800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS09805 PF00155 Aminotransferase class I and II MPE_RS09815 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS09825 PF00027 Cyclic nucleotide-binding domain MPE_RS09825 PF13545 Crp-like helix-turn-helix domain MPE_RS09835 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS09835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS09835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS09845 PF00043 Glutathione S-transferase, C-terminal domain MPE_RS09845 PF02798 Glutathione S-transferase, N-terminal domain MPE_RS09855 PF05698 Bacterial trigger factor protein (TF) C-terminus MPE_RS09865 PF00216 Bacterial DNA-binding protein MPE_RS09875 PF01066 CDP-alcohol phosphatidyltransferase MPE_RS09885 PF08459 UvrC Helix-hairpin-helix N-terminal MPE_RS09885 PF02151 UvrB/uvrC motif MPE_RS09885 PF01541 GIY-YIG catalytic domain MPE_RS09895 PF08207 Elongation factor P (EF-P) KOW-like domain MPE_RS09895 PF09285 Elongation factor P, C-terminal MPE_RS09895 PF01132 Elongation factor P (EF-P) OB domain MPE_RS09905 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MPE_RS09905 PF01266 FAD dependent oxidoreductase MPE_RS09910 PF08032 RNA 2'-O ribose methyltransferase substrate binding MPE_RS09910 PF00588 SpoU rRNA Methylase family MPE_RS09915 PF01351 Ribonuclease HII MPE_RS09920 PF02684 Lipid-A-disaccharide synthetase MPE_RS09925 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MPE_RS09925 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS09930 PF07977 FabA-like domain MPE_RS09935 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MPE_RS09935 PF14602 Hexapeptide repeat of succinyl-transferase MPE_RS09935 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS09945 PF07244 Surface antigen variable number repeat MPE_RS09945 PF01103 Surface antigen MPE_RS09950 PF02163 Peptidase family M50 MPE_RS09950 PF17820 PDZ domain MPE_RS09955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MPE_RS09955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MPE_RS09955 PF13288 DXP reductoisomerase C-terminal domain MPE_RS09965 PF01255 Putative undecaprenyl diphosphate synthase MPE_RS09970 PF01765 Ribosome recycling factor MPE_RS09975 PF00696 Amino acid kinase family MPE_RS09980 PF00889 Elongation factor TS MPE_RS09985 PF00318 Ribosomal protein S2 MPE_RS09990 PF01425 Amidase MPE_RS09995 PF01266 FAD dependent oxidoreductase MPE_RS10000 PF01256 Carbohydrate kinase MPE_RS10000 PF03853 YjeF-related protein N-terminus MPE_RS10005 PF00575 S1 RNA binding domain MPE_RS10005 PF08461 Ribonuclease R winged-helix domain MPE_RS10005 PF17876 Cold shock domain MPE_RS10005 PF08206 Ribonuclease B OB domain MPE_RS10005 PF00773 RNB domain MPE_RS10020 PF00709 Adenylosuccinate synthetase MPE_RS10025 PF13393 Histidyl-tRNA synthetase MPE_RS10030 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MPE_RS10035 PF01145 SPFH domain / Band 7 family MPE_RS10040 PF12221 Bacterial membrane protein N terminal MPE_RS10040 PF01145 SPFH domain / Band 7 family MPE_RS10045 PF13167 GTP-binding GTPase N-terminal MPE_RS10045 PF01926 50S ribosome-binding GTPase MPE_RS10045 PF16360 GTP-binding GTPase Middle Region MPE_RS10050 PF17209 Hfq protein MPE_RS10055 PF01926 50S ribosome-binding GTPase MPE_RS10055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MPE_RS10060 PF13360 PQQ-like domain MPE_RS10065 PF09976 Tetratricopeptide repeat-like domain MPE_RS10070 PF03129 Anticodon binding domain MPE_RS10070 PF13393 Histidyl-tRNA synthetase MPE_RS10075 PF04551 GcpE protein MPE_RS10090 PF04055 Radical SAM superfamily MPE_RS10095 PF00334 Nucleoside diphosphate kinase MPE_RS10100 PF00849 RNA pseudouridylate synthase MPE_RS10100 PF01479 S4 domain MPE_RS10105 PF04079 Segregation and condensation complex subunit ScpB MPE_RS10110 PF00849 RNA pseudouridylate synthase MPE_RS10110 PF01479 S4 domain MPE_RS10115 PF13525 Outer membrane lipoprotein MPE_RS10120 PF13307 Helicase C-terminal domain MPE_RS10120 PF04851 Type III restriction enzyme, res subunit MPE_RS10140 PF03969 AFG1-like ATPase MPE_RS10145 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS10145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MPE_RS10150 PF00893 Small Multidrug Resistance protein MPE_RS10155 PF00364 Biotin-requiring enzyme MPE_RS10155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MPE_RS10155 PF02817 e3 binding domain MPE_RS10160 PF02779 Transketolase, pyrimidine binding domain MPE_RS10160 PF16870 2-oxoglutarate dehydrogenase C-terminal MPE_RS10160 PF00676 Dehydrogenase E1 component MPE_RS10160 PF16078 2-oxoglutarate dehydrogenase N-terminus MPE_RS10165 PF01430 Hsp33 protein MPE_RS10170 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS10175 PF04305 Protein of unknown function (DUF455) MPE_RS10185 PF04305 Protein of unknown function (DUF455) MPE_RS10190 PF01914 MarC family integral membrane protein MPE_RS10200 PF02899 Phage integrase, N-terminal SAM-like domain MPE_RS10200 PF00589 Phage integrase family MPE_RS10205 PF03401 Tripartite tricarboxylate transporter family receptor MPE_RS10215 PF08331 Domain of unknown function (DUF1730) MPE_RS10220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MPE_RS10225 PF01520 N-acetylmuramoyl-L-alanine amidase MPE_RS10225 PF11741 AMIN domain MPE_RS10230 PF00313 'Cold-shock' DNA-binding domain MPE_RS10235 PF09335 SNARE associated Golgi protein MPE_RS10240 PF02254 TrkA-N domain MPE_RS10240 PF00999 Sodium/hydrogen exchanger family MPE_RS10245 PF08676 MutL C terminal dimerisation domain MPE_RS10245 PF01119 DNA mismatch repair protein, C-terminal domain MPE_RS10250 PF12146 Serine aminopeptidase, S33 MPE_RS10255 PF01479 S4 domain MPE_RS10255 PF00849 RNA pseudouridylate synthase MPE_RS10265 PF00005 ABC transporter MPE_RS10295 PF00155 Aminotransferase class I and II MPE_RS10295 PF00392 Bacterial regulatory proteins, gntR family MPE_RS10300 PF00011 Hsp20/alpha crystallin family MPE_RS10305 PF00011 Hsp20/alpha crystallin family MPE_RS10310 PF01272 Transcription elongation factor, GreA/GreB, C-term MPE_RS10310 PF03449 Transcription elongation factor, N-terminal MPE_RS10315 PF01066 CDP-alcohol phosphatidyltransferase MPE_RS10320 PF01613 Flavin reductase like domain MPE_RS10335 PF00664 ABC transporter transmembrane region MPE_RS10335 PF00005 ABC transporter MPE_RS10340 PF04972 BON domain MPE_RS10340 PF00691 OmpA family MPE_RS10345 PF00303 Thymidylate synthase MPE_RS10350 PF00186 Dihydrofolate reductase MPE_RS10365 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MPE_RS10380 PF00011 Hsp20/alpha crystallin family MPE_RS10390 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MPE_RS10390 PF00561 alpha/beta hydrolase fold MPE_RS10395 PF01434 Peptidase family M41 MPE_RS10395 PF17862 AAA+ lid domain MPE_RS10395 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS10400 PF00107 Zinc-binding dehydrogenase MPE_RS10400 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS10405 PF13607 Succinyl-CoA ligase like flavodoxin domain MPE_RS10405 PF13380 CoA binding domain MPE_RS10405 PF00583 Acetyltransferase (GNAT) family MPE_RS10420 PF00005 ABC transporter MPE_RS10450 PF00072 Response regulator receiver domain MPE_RS10450 PF00158 Sigma-54 interaction domain MPE_RS10450 PF02954 Bacterial regulatory protein, Fis family MPE_RS10455 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS10455 PF00989 PAS fold MPE_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS10465 PF00120 Glutamine synthetase, catalytic domain MPE_RS10465 PF03951 Glutamine synthetase, beta-Grasp domain MPE_RS10495 PF00480 ROK family MPE_RS10505 PF12848 ABC transporter MPE_RS10505 PF00005 ABC transporter MPE_RS10525 PF00270 DEAD/DEAH box helicase MPE_RS10525 PF00271 Helicase conserved C-terminal domain MPE_RS10545 PF03883 Peroxide stress protein YaaA MPE_RS10555 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS10555 PF13192 Thioredoxin domain MPE_RS10560 PF10417 C-terminal domain of 1-Cys peroxiredoxin MPE_RS10560 PF00578 AhpC/TSA family MPE_RS10570 PF02754 Cysteine-rich domain MPE_RS10570 PF13183 4Fe-4S dicluster domain MPE_RS10575 PF02915 Rubrerythrin MPE_RS10580 PF09339 IclR helix-turn-helix domain MPE_RS10580 PF01614 Bacterial transcriptional regulator MPE_RS10585 PF00768 D-alanyl-D-alanine carboxypeptidase MPE_RS10590 PF00682 HMGL-like MPE_RS10590 PF08502 LeuA allosteric (dimerisation) domain MPE_RS10595 PF01066 CDP-alcohol phosphatidyltransferase MPE_RS10600 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MPE_RS10600 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MPE_RS10605 PF10369 Small subunit of acetolactate synthase MPE_RS10610 PF00205 Thiamine pyrophosphate enzyme, central domain MPE_RS10610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MPE_RS10610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MPE_RS10635 PF01219 Prokaryotic diacylglycerol kinase MPE_RS10640 PF03641 Possible lysine decarboxylase MPE_RS10645 PF00543 Nitrogen regulatory protein P-II MPE_RS10650 PF02540 NAD synthase MPE_RS10650 PF00795 Carbon-nitrogen hydrolase MPE_RS10660 PF00202 Aminotransferase class-III MPE_RS10665 PF01037 Lrp/AsnC ligand binding domain MPE_RS10675 PF01037 Lrp/AsnC ligand binding domain MPE_RS10680 PF00675 Insulinase (Peptidase family M16) MPE_RS10680 PF05193 Peptidase M16 inactive domain MPE_RS10685 PF00719 Inorganic pyrophosphatase MPE_RS10690 PF03030 Inorganic H+ pyrophosphatase MPE_RS10695 PF03466 LysR substrate binding domain MPE_RS10695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS10705 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS10705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MPE_RS10715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MPE_RS10715 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS10720 PF02817 e3 binding domain MPE_RS10720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MPE_RS10720 PF00364 Biotin-requiring enzyme MPE_RS10725 PF00456 Transketolase, thiamine diphosphate binding domain MPE_RS10725 PF17831 Pyruvate dehydrogenase E1 component middle domain MPE_RS10730 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS10730 PF00989 PAS fold MPE_RS10735 PF00072 Response regulator receiver domain MPE_RS10735 PF00196 Bacterial regulatory proteins, luxR family MPE_RS10740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MPE_RS10740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MPE_RS10745 PF01432 Peptidase family M3 MPE_RS10755 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MPE_RS10760 PF02321 Outer membrane efflux protein MPE_RS10770 PF00873 AcrB/AcrD/AcrF family MPE_RS10775 PF01180 Dihydroorotate dehydrogenase MPE_RS10785 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MPE_RS10785 PF00534 Glycosyl transferases group 1 MPE_RS10790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MPE_RS10790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MPE_RS10790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MPE_RS10790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MPE_RS10795 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MPE_RS10795 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MPE_RS10810 PF16884 N-terminal domain of oxidoreductase MPE_RS10810 PF00107 Zinc-binding dehydrogenase MPE_RS10845 PF00749 tRNA synthetases class I (E and Q), catalytic domain MPE_RS10850 PF01053 Cys/Met metabolism PLP-dependent enzyme MPE_RS10855 PF00156 Phosphoribosyl transferase domain MPE_RS10870 PF08245 Mur ligase middle domain MPE_RS10870 PF02875 Mur ligase family, glutamate ligase domain MPE_RS10875 PF17848 Acetyl-coA carboxylase zinc finger domain MPE_RS10875 PF01039 Carboxyl transferase domain MPE_RS10880 PF00290 Tryptophan synthase alpha chain MPE_RS10885 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS10890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MPE_RS10895 PF01416 tRNA pseudouridine synthase MPE_RS10905 PF01118 Semialdehyde dehydrogenase, NAD binding domain MPE_RS10905 PF02774 Semialdehyde dehydrogenase, dimerisation domain MPE_RS10910 PF00180 Isocitrate/isopropylmalate dehydrogenase MPE_RS10915 PF00694 Aconitase C-terminal domain MPE_RS10920 PF00330 Aconitase family (aconitate hydratase) MPE_RS10925 PF00285 Citrate synthase, C-terminal domain MPE_RS10930 PF03937 Flavinator of succinate dehydrogenase MPE_RS10935 PF13085 2Fe-2S iron-sulfur cluster binding domain MPE_RS10940 PF02910 Fumarate reductase flavoprotein C-term MPE_RS10940 PF00890 FAD binding domain MPE_RS10945 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MPE_RS10955 PF00392 Bacterial regulatory proteins, gntR family MPE_RS10955 PF07702 UTRA domain MPE_RS10960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MPE_RS10960 PF00056 lactate/malate dehydrogenase, NAD binding domain MPE_RS10985 PF00270 DEAD/DEAH box helicase MPE_RS10985 PF03880 DbpA RNA binding domain MPE_RS10985 PF00271 Helicase conserved C-terminal domain MPE_RS11005 PF01569 PAP2 superfamily MPE_RS11015 PF00781 Diacylglycerol kinase catalytic domain MPE_RS11025 PF00005 ABC transporter MPE_RS11025 PF00664 ABC transporter transmembrane region MPE_RS11050 PF00296 Luciferase-like monooxygenase MPE_RS11075 PF00849 RNA pseudouridylate synthase MPE_RS11080 PF01355 High potential iron-sulfur protein MPE_RS11090 PF02769 AIR synthase related protein, C-terminal domain MPE_RS11090 PF00586 AIR synthase related protein, N-terminal domain MPE_RS11095 PF00581 Rhodanese-like domain MPE_RS11105 PF00027 Cyclic nucleotide-binding domain MPE_RS11105 PF13545 Crp-like helix-turn-helix domain MPE_RS11110 PF00313 'Cold-shock' DNA-binding domain MPE_RS11115 PF00012 Hsp70 protein MPE_RS11140 PF03479 Plants and Prokaryotes Conserved (PCC) domain MPE_RS11140 PF12804 MobA-like NTP transferase domain MPE_RS11140 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS11145 PF02652 L-lactate permease MPE_RS11160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MPE_RS11170 PF00563 EAL domain MPE_RS11170 PF05231 MASE1 MPE_RS11180 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS11185 PF01321 Creatinase/Prolidase N-terminal domain MPE_RS11185 PF00557 Metallopeptidase family M24 MPE_RS11195 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS11195 PF17151 Periplasmic sensor domain MPE_RS11205 PF12849 PBP superfamily domain MPE_RS11210 PF00005 ABC transporter MPE_RS11215 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS11220 PF03459 TOBE domain MPE_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS11230 PF08546 Ketopantoate reductase PanE/ApbA C terminal MPE_RS11230 PF02558 Ketopantoate reductase PanE/ApbA MPE_RS11235 PF01970 Tripartite tricarboxylate transporter TctA family MPE_RS11250 PF00501 AMP-binding enzyme MPE_RS11250 PF13193 AMP-binding enzyme C-terminal domain MPE_RS11275 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS11285 PF00691 OmpA family MPE_RS11290 PF03989 DNA gyrase C-terminal domain, beta-propeller MPE_RS11290 PF00521 DNA gyrase/topoisomerase IV, subunit A MPE_RS11300 PF00266 Aminotransferase class-V MPE_RS11305 PF01842 ACT domain MPE_RS11305 PF01817 Chorismate mutase type II MPE_RS11305 PF00800 Prephenate dehydratase MPE_RS11310 PF02153 Prephenate dehydrogenase MPE_RS11315 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MPE_RS11320 PF00575 S1 RNA binding domain MPE_RS11325 PF00216 Bacterial DNA-binding protein MPE_RS11335 PF18073 Rubredoxin metal binding domain MPE_RS11340 PF00294 pfkB family carbohydrate kinase MPE_RS11360 PF07733 Bacterial DNA polymerase III alpha NTPase domain MPE_RS11360 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MPE_RS11360 PF14579 Helix-hairpin-helix motif MPE_RS11360 PF02811 PHP domain MPE_RS11360 PF01336 OB-fold nucleic acid binding domain MPE_RS11370 PF04172 LrgB-like family MPE_RS11375 PF03788 LrgA family MPE_RS11385 PF00929 Exonuclease MPE_RS11390 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS11395 PF00012 Hsp70 protein MPE_RS11400 PF07743 HSCB C-terminal oligomerisation domain MPE_RS11405 PF01521 Iron-sulphur cluster biosynthesis MPE_RS11410 PF01592 NifU-like N terminal domain MPE_RS11415 PF00266 Aminotransferase class-V MPE_RS11420 PF02082 Transcriptional regulator MPE_RS11425 PF01451 Low molecular weight phosphotyrosine protein phosphatase MPE_RS11430 PF01361 Tautomerase enzyme MPE_RS11435 PF07836 DmpG-like communication domain MPE_RS11435 PF00682 HMGL-like MPE_RS11440 PF01118 Semialdehyde dehydrogenase, NAD binding domain MPE_RS11440 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation MPE_RS11470 PF01557 Fumarylacetoacetate (FAA) hydrolase family MPE_RS11475 PF00561 alpha/beta hydrolase fold MPE_RS11480 PF00171 Aldehyde dehydrogenase family MPE_RS11485 PF03928 Haem-degrading MPE_RS11490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS11495 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS11500 PF03466 LysR substrate binding domain MPE_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS11505 PF00970 Oxidoreductase FAD-binding domain MPE_RS11505 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS11505 PF00175 Oxidoreductase NAD-binding domain MPE_RS11510 PF04663 Phenol hydroxylase conserved region MPE_RS11515 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS11515 PF04945 YHS domain MPE_RS11520 PF02406 MmoB/DmpM family MPE_RS11525 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS11530 PF06099 Phenol hydroxylase subunit MPE_RS11535 PF02954 Bacterial regulatory protein, Fis family MPE_RS11535 PF06505 Activator of aromatic catabolism MPE_RS11535 PF00158 Sigma-54 interaction domain MPE_RS11535 PF02830 V4R domain MPE_RS11540 PF17757 UvrB interaction domain MPE_RS11540 PF12344 Ultra-violet resistance protein B MPE_RS11540 PF02151 UvrB/uvrC motif MPE_RS11540 PF04851 Type III restriction enzyme, res subunit MPE_RS11540 PF00271 Helicase conserved C-terminal domain MPE_RS11575 PF00155 Aminotransferase class I and II MPE_RS11590 PF04060 Putative Fe-S cluster MPE_RS11595 PF00633 Helix-hairpin-helix motif MPE_RS11595 PF00730 HhH-GPD superfamily base excision DNA repair protein MPE_RS11595 PF10576 Iron-sulfur binding domain of endonuclease III MPE_RS11610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS11620 PF02654 Cobalamin-5-phosphate synthase MPE_RS11625 PF02277 Phosphoribosyltransferase MPE_RS11630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MPE_RS11630 PF07685 CobB/CobQ-like glutamine amidotransferase domain MPE_RS11635 PF00005 ABC transporter MPE_RS11640 PF01032 FecCD transport family MPE_RS11650 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase MPE_RS11655 PF00593 TonB dependent receptor MPE_RS11655 PF07715 TonB-dependent Receptor Plug Domain MPE_RS11675 PF01925 Sulfite exporter TauE/SafE MPE_RS11685 PF08376 Nitrate and nitrite sensing MPE_RS11685 PF03861 ANTAR domain MPE_RS11690 PF07690 Major Facilitator Superfamily MPE_RS11695 PF03793 PASTA domain MPE_RS11695 PF00069 Protein kinase domain MPE_RS11700 PF18267 Rubredoxin NAD+ reductase C-terminal domain MPE_RS11700 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS11700 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MPE_RS11700 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MPE_RS11700 PF04324 BFD-like [2Fe-2S] binding domain MPE_RS11705 PF00355 Rieske [2Fe-2S] domain MPE_RS11710 PF01568 Molydopterin dinucleotide binding domain MPE_RS11710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MPE_RS11710 PF04324 BFD-like [2Fe-2S] binding domain MPE_RS11710 PF00384 Molybdopterin oxidoreductase MPE_RS11715 PF02885 Glycosyl transferase family, helical bundle domain MPE_RS11720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MPE_RS11730 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MPE_RS11730 PF01411 tRNA synthetases class II (A) MPE_RS11730 PF02272 DHHA1 domain MPE_RS11735 PF00171 Aldehyde dehydrogenase family MPE_RS11750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS11750 PF03466 LysR substrate binding domain MPE_RS11755 PF03466 LysR substrate binding domain MPE_RS11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS11770 PF13614 AAA domain MPE_RS11820 PF01751 Toprim domain MPE_RS11820 PF01131 DNA topoisomerase MPE_RS11825 PF03960 ArsC family MPE_RS11830 PF01758 Sodium Bile acid symporter family MPE_RS11845 PF01022 Bacterial regulatory protein, arsR family MPE_RS11870 PF13411 MerR HTH family regulatory protein MPE_RS11875 PF03239 Iron permease FTR1 family MPE_RS11895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS11895 PF00529 HlyD membrane-fusion protein of T1SS MPE_RS11900 PF00873 AcrB/AcrD/AcrF family MPE_RS12080 PF04002 RadC-like JAB domain MPE_RS12140 PF13356 Arm DNA-binding domain MPE_RS12140 PF14659 Phage integrase, N-terminal SAM-like domain MPE_RS12140 PF00589 Phage integrase family MPE_RS12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS12160 PF03466 LysR substrate binding domain MPE_RS12175 PF13520 Amino acid permease MPE_RS12180 PF06751 Ethanolamine ammonia lyase large subunit (EutB) MPE_RS12185 PF05985 Ethanolamine ammonia-lyase light chain (EutC) MPE_RS12245 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding MPE_RS12245 PF10518 TAT (twin-arginine translocation) pathway signal sequence MPE_RS12245 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS12260 PF02872 5'-nucleotidase, C-terminal domain MPE_RS12260 PF00149 Calcineurin-like phosphoesterase MPE_RS12285 PF00034 Cytochrome c MPE_RS12290 PF00174 Oxidoreductase molybdopterin binding domain MPE_RS12300 PF04143 Sulphur transport MPE_RS12305 PF00155 Aminotransferase class I and II MPE_RS12310 PF00561 alpha/beta hydrolase fold MPE_RS12315 PF07859 alpha/beta hydrolase fold MPE_RS12320 PF01609 Transposase DDE domain MPE_RS12320 PF05598 Transposase domain (DUF772) MPE_RS12330 PF00392 Bacterial regulatory proteins, gntR family MPE_RS12330 PF00155 Aminotransferase class I and II MPE_RS12345 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS12345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS12345 PF08448 PAS fold MPE_RS12345 PF00072 Response regulator receiver domain MPE_RS12345 PF13188 PAS domain MPE_RS12350 PF00072 Response regulator receiver domain MPE_RS12355 PF02954 Bacterial regulatory protein, Fis family MPE_RS12355 PF00072 Response regulator receiver domain MPE_RS12355 PF00158 Sigma-54 interaction domain MPE_RS12365 PF01842 ACT domain MPE_RS12365 PF13840 ACT domain MPE_RS12365 PF00696 Amino acid kinase family MPE_RS12370 PF09179 TilS substrate binding domain MPE_RS12370 PF11734 TilS substrate C-terminal domain MPE_RS12370 PF01171 PP-loop family MPE_RS12375 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MPE_RS12380 PF06029 AlkA N-terminal domain MPE_RS12380 PF00730 HhH-GPD superfamily base excision DNA repair protein MPE_RS12380 PF02805 Metal binding domain of Ada MPE_RS12380 PF12833 Helix-turn-helix domain MPE_RS12385 PF09190 DALR domain MPE_RS12385 PF01406 tRNA synthetases class I (C) catalytic domain MPE_RS12390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MPE_RS12395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MPE_RS12400 PF00149 Calcineurin-like phosphoesterase MPE_RS12405 PF06167 Glucose-regulated metallo-peptidase M90 MPE_RS12410 PF10431 C-terminal, D2-small domain, of ClpB protein MPE_RS12410 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS12410 PF17871 AAA lid domain MPE_RS12410 PF02861 Clp amino terminal domain, pathogenicity island component MPE_RS12410 PF07724 AAA domain (Cdc48 subfamily) MPE_RS12415 PF02617 ATP-dependent Clp protease adaptor protein ClpS MPE_RS12420 PF00313 'Cold-shock' DNA-binding domain MPE_RS12445 PF00180 Isocitrate/isopropylmalate dehydrogenase MPE_RS12455 PF04055 Radical SAM superfamily MPE_RS12455 PF06969 HemN C-terminal domain MPE_RS12460 PF00027 Cyclic nucleotide-binding domain MPE_RS12460 PF13545 Crp-like helix-turn-helix domain MPE_RS12475 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MPE_RS12475 PF12801 4Fe-4S binding domain MPE_RS12475 PF13746 4Fe-4S dicluster domain MPE_RS12480 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MPE_RS12480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS12495 PF00115 Cytochrome C and Quinol oxidase polypeptide I MPE_RS12505 PF00403 Heavy-metal-associated domain MPE_RS12515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MPE_RS12515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MPE_RS12520 PF13742 OB-fold nucleic acid binding domain MPE_RS12520 PF02601 Exonuclease VII, large subunit MPE_RS12525 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS12530 PF02472 Biopolymer transport protein ExbD/TolR MPE_RS12535 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MPE_RS12540 PF03966 Trm112p-like protein MPE_RS12545 PF02348 Cytidylyltransferase MPE_RS12550 PF05191 Adenylate kinase, active site lid MPE_RS12555 PF00106 short chain dehydrogenase MPE_RS12560 PF08278 DNA primase DnaG DnaB-binding MPE_RS12560 PF01807 CHC2 zinc finger MPE_RS12560 PF08275 DNA primase catalytic core, N-terminal domain MPE_RS12560 PF10410 DnaB-helicase binding domain of primase MPE_RS12565 PF00140 Sigma-70 factor, region 1.2 MPE_RS12565 PF04542 Sigma-70 region 2 MPE_RS12565 PF04539 Sigma-70 region 3 MPE_RS12565 PF03979 Sigma-70 factor, region 1.1 MPE_RS12565 PF04546 Sigma-70, non-essential region MPE_RS12565 PF04545 Sigma-70, region 4 MPE_RS12570 PF16701 Adenylate cyclase regulatory domain MPE_RS12570 PF00211 Adenylate and Guanylate cyclase catalytic domain MPE_RS12575 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS12585 PF00762 Ferrochelatase MPE_RS12590 PF01479 S4 domain MPE_RS12595 PF01025 GrpE MPE_RS12600 PF00012 Hsp70 protein MPE_RS12605 PF00226 DnaJ domain MPE_RS12605 PF00684 DnaJ central domain MPE_RS12605 PF01556 DnaJ C terminal domain MPE_RS12610 PF00884 Sulfatase MPE_RS12610 PF08019 Phosphoethanolamine transferase EptA/EptB MPE_RS12620 PF00072 Response regulator receiver domain MPE_RS12620 PF00486 Transcriptional regulatory protein, C terminal MPE_RS12625 PF13492 GAF domain MPE_RS12625 PF13493 Domain of unknown function (DUF4118) MPE_RS12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS12625 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS12625 PF02702 Osmosensitive K+ channel His kinase sensor domain MPE_RS12630 PF01544 CorA-like Mg2+ transporter protein MPE_RS12635 PF02669 K+-transporting ATPase, c chain MPE_RS12645 PF03814 Potassium-transporting ATPase A subunit MPE_RS12655 PF04055 Radical SAM superfamily MPE_RS12660 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS12660 PF03707 Bacterial signalling protein N terminal repeat MPE_RS12660 PF00563 EAL domain MPE_RS12665 PF00072 Response regulator receiver domain MPE_RS12670 PF01810 LysE type translocator MPE_RS12675 PF16177 Acetyl-coenzyme A synthetase N-terminus MPE_RS12675 PF13193 AMP-binding enzyme C-terminal domain MPE_RS12675 PF00501 AMP-binding enzyme MPE_RS12690 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal MPE_RS12690 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal MPE_RS12695 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS12695 PF00107 Zinc-binding dehydrogenase MPE_RS12700 PF16925 Tetracyclin repressor-like, C-terminal domain MPE_RS12700 PF00440 Bacterial regulatory proteins, tetR family MPE_RS12705 PF00877 NlpC/P60 family MPE_RS12710 PF06463 Molybdenum Cofactor Synthesis C MPE_RS12710 PF04055 Radical SAM superfamily MPE_RS12715 PF12804 MobA-like NTP transferase domain MPE_RS12725 PF03453 MoeA N-terminal region (domain I and II) MPE_RS12725 PF00994 Probable molybdopterin binding domain MPE_RS12725 PF03454 MoeA C-terminal region (domain IV) MPE_RS12730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MPE_RS12730 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS12735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS12745 PF00075 RNase H MPE_RS12750 PF01209 ubiE/COQ5 methyltransferase family MPE_RS12755 PF00753 Metallo-beta-lactamase superfamily MPE_RS12755 PF16123 Hydroxyacylglutathione hydrolase C-terminus MPE_RS12760 PF01476 LysM domain MPE_RS12760 PF01464 Transglycosylase SLT domain MPE_RS12770 PF13662 Toprim domain MPE_RS12770 PF02132 RecR protein MPE_RS12775 PF02575 YbaB/EbfC DNA-binding family MPE_RS12780 PF12169 DNA polymerase III subunits gamma and tau domain III MPE_RS12780 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MPE_RS12780 PF12170 DNA polymerase III tau subunit V interacting with alpha MPE_RS12785 PF02769 AIR synthase related protein, C-terminal domain MPE_RS12785 PF00586 AIR synthase related protein, N-terminal domain MPE_RS12790 PF00196 Bacterial regulatory proteins, luxR family MPE_RS12790 PF00072 Response regulator receiver domain MPE_RS12795 PF13493 Domain of unknown function (DUF4118) MPE_RS12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS12795 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS12795 PF00989 PAS fold MPE_RS12795 PF08447 PAS fold MPE_RS12795 PF13426 PAS domain MPE_RS12800 PF05598 Transposase domain (DUF772) MPE_RS12800 PF01609 Transposase DDE domain MPE_RS12805 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS12810 PF06234 Toluene-4-monooxygenase system protein B (TmoB) MPE_RS12815 PF00355 Rieske [2Fe-2S] domain MPE_RS12820 PF02406 MmoB/DmpM family MPE_RS12825 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS12845 PF00672 HAMP domain MPE_RS12845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS12845 PF02203 Tar ligand binding domain homologue MPE_RS12855 PF14403 Circularly permuted ATP-grasp type 2 MPE_RS12860 PF08379 Bacterial transglutaminase-like N-terminal region MPE_RS12860 PF01841 Transglutaminase-like superfamily MPE_RS12865 PF04168 A predicted alpha-helical domain with a conserved ER motif. MPE_RS12865 PF14403 Circularly permuted ATP-grasp type 2 MPE_RS12875 PF00753 Metallo-beta-lactamase superfamily MPE_RS12875 PF03772 Competence protein MPE_RS12885 PF02600 Disulfide bond formation protein DsbB MPE_RS12895 PF00521 DNA gyrase/topoisomerase IV, subunit A MPE_RS12900 PF01751 Toprim domain MPE_RS12900 PF00204 DNA gyrase B MPE_RS12900 PF00986 DNA gyrase B subunit, carboxyl terminus MPE_RS12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS12915 PF00701 Dihydrodipicolinate synthetase family MPE_RS12920 PF06804 NlpB/DapX lipoprotein MPE_RS12940 PF08007 Cupin superfamily protein MPE_RS12945 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MPE_RS12950 PF00692 dUTPase MPE_RS12955 PF02441 Flavoprotein MPE_RS12955 PF04127 DNA / pantothenate metabolism flavoprotein MPE_RS12965 PF01654 Cytochrome bd terminal oxidase subunit I MPE_RS12970 PF02322 Cytochrome bd terminal oxidase subunit II MPE_RS12975 PF03466 LysR substrate binding domain MPE_RS12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS12990 PF00171 Aldehyde dehydrogenase family MPE_RS13005 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS13010 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain MPE_RS13010 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 MPE_RS13015 PF13247 4Fe-4S dicluster domain MPE_RS13015 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS13015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MPE_RS13020 PF00158 Sigma-54 interaction domain MPE_RS13020 PF01590 GAF domain MPE_RS13020 PF02954 Bacterial regulatory protein, Fis family MPE_RS13025 PF00561 alpha/beta hydrolase fold MPE_RS13030 PF12706 Beta-lactamase superfamily domain MPE_RS13035 PF03070 TENA/THI-4/PQQC family MPE_RS13040 PF05402 Coenzyme PQQ synthesis protein D (PqqD) MPE_RS13045 PF04055 Radical SAM superfamily MPE_RS13045 PF13186 Iron-sulfur cluster-binding domain MPE_RS13050 PF00005 ABC transporter MPE_RS13085 PF05598 Transposase domain (DUF772) MPE_RS13085 PF01609 Transposase DDE domain MPE_RS13095 PF05598 Transposase domain (DUF772) MPE_RS13095 PF01609 Transposase DDE domain MPE_RS13105 PF01609 Transposase DDE domain MPE_RS13105 PF05598 Transposase domain (DUF772) MPE_RS13120 PF00196 Bacterial regulatory proteins, luxR family MPE_RS13120 PF00072 Response regulator receiver domain MPE_RS13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS13125 PF07730 Histidine kinase MPE_RS13125 PF05231 MASE1 MPE_RS13140 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal MPE_RS13150 PF02289 Cyclohydrolase (MCH) MPE_RS13155 PF08443 RimK-like ATP-grasp domain MPE_RS13165 PF08714 Formaldehyde-activating enzyme (Fae) MPE_RS13175 PF01590 GAF domain MPE_RS13175 PF02954 Bacterial regulatory protein, Fis family MPE_RS13175 PF00158 Sigma-54 interaction domain MPE_RS13185 PF00809 Pterin binding enzyme MPE_RS13195 PF04476 4-HFC-P synthase MPE_RS13225 PF07969 Amidohydrolase family MPE_RS13230 PF02741 FTR, proximal lobe MPE_RS13230 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase MPE_RS13245 PF00425 chorismate binding enzyme MPE_RS13245 PF04715 Anthranilate synthase component I, N terminal region MPE_RS13245 PF00117 Glutamine amidotransferase class-I MPE_RS13255 PF02649 Type I GTP cyclohydrolase folE2 MPE_RS13260 PF02779 Transketolase, pyrimidine binding domain MPE_RS13260 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MPE_RS13260 PF02780 Transketolase, C-terminal domain MPE_RS13265 PF00348 Polyprenyl synthetase MPE_RS13270 PF02609 Exonuclease VII small subunit MPE_RS13285 PF00581 Rhodanese-like domain MPE_RS13290 PF00582 Universal stress protein family MPE_RS13295 PF00551 Formyl transferase MPE_RS13305 PF00579 tRNA synthetases class I (W and Y) MPE_RS13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS13315 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS13320 PF00072 Response regulator receiver domain MPE_RS13320 PF00486 Transcriptional regulatory protein, C terminal MPE_RS13330 PF02678 Pirin MPE_RS13330 PF05726 Pirin C-terminal cupin domain MPE_RS13355 PF10503 Esterase PHB depolymerase MPE_RS13370 PF02975 Methylamine dehydrogenase, L chain MPE_RS13375 PF00578 AhpC/TSA family MPE_RS13385 PF06433 Methylamine dehydrogenase heavy chain (MADH) MPE_RS13390 PF00850 Histone deacetylase domain MPE_RS13405 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS13410 PF05853 beta-keto acid cleavage enzyme MPE_RS13420 PF08241 Methyltransferase domain MPE_RS13430 PF02203 Tar ligand binding domain homologue MPE_RS13430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS13430 PF00672 HAMP domain MPE_RS13435 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS13435 PF03707 Bacterial signalling protein N terminal repeat MPE_RS13435 PF00563 EAL domain MPE_RS13455 PF00501 AMP-binding enzyme MPE_RS13485 PF00873 AcrB/AcrD/AcrF family MPE_RS13495 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS13495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS13495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS13505 PF09339 IclR helix-turn-helix domain MPE_RS13505 PF01614 Bacterial transcriptional regulator MPE_RS13510 PF13609 Gram-negative porin MPE_RS13515 PF00884 Sulfatase MPE_RS13520 PF03781 Sulfatase-modifying factor enzyme 1 MPE_RS13525 PF00376 MerR family regulatory protein MPE_RS13525 PF09278 MerR, DNA binding MPE_RS13535 PF03358 NADPH-dependent FMN reductase MPE_RS13545 PF00196 Bacterial regulatory proteins, luxR family MPE_RS13545 PF00072 Response regulator receiver domain MPE_RS13550 PF00501 AMP-binding enzyme MPE_RS13550 PF13193 AMP-binding enzyme C-terminal domain MPE_RS13560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS13565 PF00857 Isochorismatase family MPE_RS13580 PF02403 Seryl-tRNA synthetase N-terminal domain MPE_RS13580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MPE_RS13585 PF02401 LytB protein MPE_RS13590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MPE_RS13595 PF04002 RadC-like JAB domain MPE_RS13610 PF10609 NUBPL iron-transfer P-loop NTPase MPE_RS13615 PF05230 MASE2 domain MPE_RS13615 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS13620 PF01739 CheR methyltransferase, SAM binding domain MPE_RS13620 PF03705 CheR methyltransferase, all-alpha domain MPE_RS13625 PF03975 CheD chemotactic sensory transduction MPE_RS13630 PF01339 CheB methylesterase MPE_RS13630 PF00072 Response regulator receiver domain MPE_RS13635 PF06969 HemN C-terminal domain MPE_RS13635 PF04055 Radical SAM superfamily MPE_RS13640 PF01725 Ham1 family MPE_RS13645 PF03725 3' exoribonuclease family, domain 2 MPE_RS13645 PF01138 3' exoribonuclease family, domain 1 MPE_RS13655 PF00069 Protein kinase domain MPE_RS13655 PF03793 PASTA domain MPE_RS13660 PF03755 YicC-like family, N-terminal region MPE_RS13660 PF08340 Domain of unknown function (DUF1732) MPE_RS13665 PF13356 Arm DNA-binding domain MPE_RS13665 PF00589 Phage integrase family MPE_RS13675 PF01381 Helix-turn-helix MPE_RS13700 PF00625 Guanylate kinase MPE_RS13705 PF01192 RNA polymerase Rpb6 MPE_RS13715 PF04143 Sulphur transport MPE_RS13725 PF00753 Metallo-beta-lactamase superfamily MPE_RS13730 PF04607 Region found in RelA / SpoT proteins MPE_RS13730 PF13291 ACT domain MPE_RS13730 PF02824 TGS domain MPE_RS13735 PF02515 CoA-transferase family III MPE_RS13740 PF01272 Transcription elongation factor, GreA/GreB, C-term MPE_RS13740 PF03449 Transcription elongation factor, N-terminal MPE_RS13745 PF00733 Asparagine synthase MPE_RS13745 PF13537 Glutamine amidotransferase domain MPE_RS13770 PF01050 Mannose-6-phosphate isomerase MPE_RS13770 PF00483 Nucleotidyl transferase MPE_RS13775 PF01370 NAD dependent epimerase/dehydratase family MPE_RS13780 PF16363 GDP-mannose 4,6 dehydratase MPE_RS13785 PF10609 NUBPL iron-transfer P-loop NTPase MPE_RS13800 PF01209 ubiE/COQ5 methyltransferase family MPE_RS13820 PF03009 Glycerophosphoryl diester phosphodiesterase family MPE_RS13830 PF00672 HAMP domain MPE_RS13830 PF01627 Hpt domain MPE_RS13830 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS13830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS13830 PF00072 Response regulator receiver domain MPE_RS13830 PF17149 Periplasmic sensor domain found in signal transduction proteins MPE_RS13835 PF01960 ArgJ family MPE_RS13840 PF01043 SecA preprotein cross-linking domain MPE_RS13840 PF02810 SEC-C motif MPE_RS13840 PF07517 SecA DEAD-like domain MPE_RS13840 PF07516 SecA Wing and Scaffold domain MPE_RS13845 PF01551 Peptidase family M23 MPE_RS13845 PF08525 Opacity-associated protein A N-terminal motif MPE_RS13845 PF01476 LysM domain MPE_RS13855 PF00005 ABC transporter MPE_RS13860 PF02687 FtsX-like permease family MPE_RS13860 PF12704 MacB-like periplasmic core domain MPE_RS13875 PF02272 DHHA1 domain MPE_RS13875 PF01368 DHH family MPE_RS13875 PF17768 RecJ OB domain MPE_RS13880 PF07995 Glucose / Sorbosone dehydrogenase MPE_RS13885 PF07995 Glucose / Sorbosone dehydrogenase MPE_RS13890 PF00072 Response regulator receiver domain MPE_RS13890 PF00486 Transcriptional regulatory protein, C terminal MPE_RS13895 PF08521 Two-component sensor kinase N-terminal MPE_RS13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS13895 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS13900 PF02811 PHP domain MPE_RS13905 PF01300 Telomere recombination MPE_RS13910 PF01757 Acyltransferase family MPE_RS13915 PF01042 Endoribonuclease L-PSP MPE_RS13920 PF02660 Glycerol-3-phosphate acyltransferase MPE_RS13925 PF04073 Aminoacyl-tRNA editing domain MPE_RS13935 PF00005 ABC transporter MPE_RS13935 PF00664 ABC transporter transmembrane region MPE_RS13945 PF13439 Glycosyltransferase Family 4 MPE_RS13945 PF00534 Glycosyl transferases group 1 MPE_RS13950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MPE_RS13975 PF00535 Glycosyl transferase family 2 MPE_RS13985 PF00472 RF-1 domain MPE_RS13985 PF03462 PCRF domain MPE_RS13990 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MPE_RS13990 PF01433 Peptidase family M1 domain MPE_RS13990 PF11940 Domain of unknown function (DUF3458) Ig-like fold MPE_RS13995 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MPE_RS14000 PF00365 Phosphofructokinase MPE_RS14025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS14025 PF08447 PAS fold MPE_RS14030 PF03466 LysR substrate binding domain MPE_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS14035 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MPE_RS14035 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MPE_RS14040 PF00101 Ribulose bisphosphate carboxylase, small chain MPE_RS14045 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS14045 PF17866 AAA lid domain MPE_RS14050 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS14055 PF00834 Ribulose-phosphate 3 epimerase family MPE_RS14060 PF13419 Haloacid dehalogenase-like hydrolase MPE_RS14065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MPE_RS14070 PF00485 Phosphoribulokinase / Uridine kinase family MPE_RS14075 PF02780 Transketolase, C-terminal domain MPE_RS14075 PF00456 Transketolase, thiamine diphosphate binding domain MPE_RS14075 PF02779 Transketolase, pyrimidine binding domain MPE_RS14080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MPE_RS14080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MPE_RS14085 PF00162 Phosphoglycerate kinase MPE_RS14090 PF01116 Fructose-bisphosphate aldolase class-II MPE_RS14095 PF05981 CreA protein MPE_RS14105 PF02666 Phosphatidylserine decarboxylase MPE_RS14110 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS14110 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS14110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS14120 PF00005 ABC transporter MPE_RS14145 PF07715 TonB-dependent Receptor Plug Domain MPE_RS14145 PF00593 TonB dependent receptor MPE_RS14150 PF08753 NikR C terminal nickel binding domain MPE_RS14150 PF01402 Ribbon-helix-helix protein, copG family MPE_RS14155 PF00374 Nickel-dependent hydrogenase MPE_RS14160 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MPE_RS14160 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MPE_RS14165 PF00158 Sigma-54 interaction domain MPE_RS14165 PF02954 Bacterial regulatory protein, Fis family MPE_RS14165 PF00072 Response regulator receiver domain MPE_RS14170 PF00551 Formyl transferase MPE_RS14170 PF02911 Formyl transferase, C-terminal domain MPE_RS14170 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS14180 PF00586 AIR synthase related protein, N-terminal domain MPE_RS14180 PF02769 AIR synthase related protein, C-terminal domain MPE_RS14185 PF01924 Hydrogenase formation hypA family MPE_RS14190 PF01455 HupF/HypC family MPE_RS14195 PF17788 HypF Kae1-like domain MPE_RS14200 PF02492 CobW/HypB/UreG, nucleotide-binding domain MPE_RS14205 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MPE_RS14215 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE MPE_RS14220 PF00301 Rubredoxin MPE_RS14225 PF04809 HupH hydrogenase expression protein, C-terminal conserved region MPE_RS14230 PF07449 Hydrogenase-1 expression protein HyaE MPE_RS14235 PF01455 HupF/HypC family MPE_RS14240 PF01750 Hydrogenase maturation protease MPE_RS14245 PF01381 Helix-turn-helix MPE_RS14250 PF01292 Prokaryotic cytochrome b561 MPE_RS14255 PF04955 HupE / UreJ protein MPE_RS14260 PF00374 Nickel-dependent hydrogenase MPE_RS14265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MPE_RS14265 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MPE_RS14270 PF01070 FMN-dependent dehydrogenase MPE_RS14280 PF05114 Protein of unknown function (DUF692) MPE_RS14295 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MPE_RS14300 PF03480 Bacterial extracellular solute-binding protein, family 7 MPE_RS14305 PF01523 Putative modulator of DNA gyrase MPE_RS14310 PF04751 Protein of unknown function (DUF615) MPE_RS14315 PF00994 Probable molybdopterin binding domain MPE_RS14320 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS14325 PF00588 SpoU rRNA Methylase family MPE_RS14330 PF00459 Inositol monophosphatase family MPE_RS14335 PF05192 MutS domain III MPE_RS14335 PF05188 MutS domain II MPE_RS14335 PF01624 MutS domain I MPE_RS14335 PF00488 MutS domain V MPE_RS14335 PF05190 MutS family domain IV MPE_RS14350 PF00117 Glutamine amidotransferase class-I MPE_RS14350 PF06418 CTP synthase N-terminus MPE_RS14355 PF00793 DAHP synthetase I family MPE_RS14360 PF03952 Enolase, N-terminal domain MPE_RS14360 PF00113 Enolase, C-terminal TIM barrel domain MPE_RS14365 PF04977 Septum formation initiator MPE_RS14370 PF04973 Nicotinamide mononucleotide transporter MPE_RS14380 PF02390 Putative methyltransferase MPE_RS14390 PF00106 short chain dehydrogenase MPE_RS14395 PF01595 Cyclin M transmembrane N-terminal domain MPE_RS14395 PF00571 CBS domain MPE_RS14395 PF03471 Transporter associated domain MPE_RS14400 PF00149 Calcineurin-like phosphoesterase MPE_RS14415 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS14420 PF00563 EAL domain MPE_RS14420 PF03707 Bacterial signalling protein N terminal repeat MPE_RS14420 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS14425 PF01627 Hpt domain MPE_RS14425 PF00072 Response regulator receiver domain MPE_RS14425 PF00672 HAMP domain MPE_RS14425 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS14425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MPE_RS14425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS14435 PF00072 Response regulator receiver domain MPE_RS14435 PF00486 Transcriptional regulatory protein, C terminal MPE_RS14445 PF07238 PilZ domain MPE_RS14445 PF07317 Flagellar regulator YcgR MPE_RS14455 PF02561 Flagellar protein FliS MPE_RS14460 PF07195 Flagellar hook-associated protein 2 C-terminus MPE_RS14460 PF02465 Flagellar hook-associated protein 2 N-terminus MPE_RS14465 PF00669 Bacterial flagellin N-terminal helical region MPE_RS14465 PF00700 Bacterial flagellin C-terminal helical region MPE_RS14470 PF00669 Bacterial flagellin N-terminal helical region MPE_RS14470 PF00700 Bacterial flagellin C-terminal helical region MPE_RS14475 PF05247 Flagellar transcriptional activator (FlhD) MPE_RS14480 PF05280 Flagellar transcriptional activator (FlhC) MPE_RS14490 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS14495 PF13677 Membrane MotB of proton-channel complex MotA/MotB MPE_RS14495 PF00691 OmpA family MPE_RS14505 PF04344 Chemotaxis phosphatase, CheZ MPE_RS14515 PF17773 UPF0176 acylphosphatase like domain MPE_RS14515 PF00581 Rhodanese-like domain MPE_RS14520 PF03575 Peptidase family S51 MPE_RS14525 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS14530 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS14535 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS14545 PF00005 ABC transporter MPE_RS14555 PF00743 Flavin-binding monooxygenase-like MPE_RS14560 PF00561 alpha/beta hydrolase fold MPE_RS14565 PF03358 NADPH-dependent FMN reductase MPE_RS14570 PF03358 NADPH-dependent FMN reductase MPE_RS14575 PF17954 Quercetinase C-terminal cupin domain MPE_RS14575 PF02678 Pirin MPE_RS14580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS14580 PF03466 LysR substrate binding domain MPE_RS14585 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase MPE_RS14595 PF01039 Carboxyl transferase domain MPE_RS14600 PF06857 Malonate decarboxylase delta subunit (MdcD) MPE_RS14605 PF16957 Malonate decarboxylase, alpha subunit, transporter MPE_RS14615 PF03466 LysR substrate binding domain MPE_RS14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS14620 PF03401 Tripartite tricarboxylate transporter family receptor MPE_RS14625 PF07729 FCD domain MPE_RS14625 PF00392 Bacterial regulatory proteins, gntR family MPE_RS14630 PF00749 tRNA synthetases class I (E and Q), catalytic domain MPE_RS14640 PF00072 Response regulator receiver domain MPE_RS14640 PF00196 Bacterial regulatory proteins, luxR family MPE_RS14645 PF07730 Histidine kinase MPE_RS14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS14685 PF00929 Exonuclease MPE_RS14690 PF01435 Peptidase family M48 MPE_RS14695 PF01329 Pterin 4 alpha carbinolamine dehydratase MPE_RS14700 PF03193 RsgA GTPase MPE_RS14710 PF17874 MalT-like TPR region MPE_RS14710 PF00196 Bacterial regulatory proteins, luxR family MPE_RS14720 PF00271 Helicase conserved C-terminal domain MPE_RS14720 PF00270 DEAD/DEAH box helicase MPE_RS14730 PF08447 PAS fold MPE_RS14730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS14755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS14765 PF01594 AI-2E family transporter MPE_RS14770 PF12804 MobA-like NTP transferase domain MPE_RS14770 PF00132 Bacterial transferase hexapeptide (six repeats) MPE_RS14775 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MPE_RS14780 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS14780 PF01799 [2Fe-2S] binding domain MPE_RS14785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MPE_RS14785 PF01243 Pyridoxamine 5'-phosphate oxidase MPE_RS14790 PF00593 TonB dependent receptor MPE_RS14790 PF07715 TonB-dependent Receptor Plug Domain MPE_RS14800 PF01625 Peptide methionine sulfoxide reductase MPE_RS14810 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MPE_RS14815 PF01464 Transglycosylase SLT domain MPE_RS14815 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MPE_RS14820 PF00464 Serine hydroxymethyltransferase MPE_RS14825 PF03477 ATP cone domain MPE_RS14855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MPE_RS14855 PF01872 RibD C-terminal domain MPE_RS14860 PF00677 Lumazine binding domain MPE_RS14865 PF00925 GTP cyclohydrolase II MPE_RS14865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MPE_RS14870 PF00885 6,7-dimethyl-8-ribityllumazine synthase MPE_RS14875 PF01029 NusB family MPE_RS14880 PF00155 Aminotransferase class I and II MPE_RS14895 PF03061 Thioesterase superfamily MPE_RS14900 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS14905 PF02472 Biopolymer transport protein ExbD/TolR MPE_RS14925 PF05114 Protein of unknown function (DUF692) MPE_RS14935 PF08281 Sigma-70, region 4 MPE_RS14935 PF04542 Sigma-70 region 2 MPE_RS14945 PF00440 Bacterial regulatory proteins, tetR family MPE_RS14945 PF13977 BetI-type transcriptional repressor, C-terminal MPE_RS14950 PF02321 Outer membrane efflux protein MPE_RS14955 PF00873 AcrB/AcrD/AcrF family MPE_RS14960 PF05598 Transposase domain (DUF772) MPE_RS14960 PF01609 Transposase DDE domain MPE_RS14965 PF00873 AcrB/AcrD/AcrF family MPE_RS14970 PF00529 HlyD membrane-fusion protein of T1SS MPE_RS14970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS14975 PF01968 Hydantoinase/oxoprolinase MPE_RS14975 PF05378 Hydantoinase/oxoprolinase N-terminal region MPE_RS14980 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MPE_RS14980 PF00437 Type II/IV secretion system protein MPE_RS14990 PF03793 PASTA domain MPE_RS14990 PF00069 Protein kinase domain MPE_RS14995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MPE_RS14995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MPE_RS15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS15070 PF05598 Transposase domain (DUF772) MPE_RS15070 PF01609 Transposase DDE domain MPE_RS15080 PF01609 Transposase DDE domain MPE_RS15080 PF05598 Transposase domain (DUF772) MPE_RS15090 PF05598 Transposase domain (DUF772) MPE_RS15090 PF01609 Transposase DDE domain MPE_RS15105 PF11867 Domain of unknown function (DUF3387) MPE_RS15105 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) MPE_RS15105 PF18766 SWI2/SNF2 ATPase MPE_RS15110 PF01695 IstB-like ATP binding protein MPE_RS15115 PF00665 Integrase core domain MPE_RS15135 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MPE_RS15145 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MPE_RS15145 PF03900 Porphobilinogen deaminase, C-terminal domain MPE_RS15150 PF00311 Phosphoenolpyruvate carboxylase MPE_RS15160 PF01738 Dienelactone hydrolase family MPE_RS15165 PF02541 Ppx/GppA phosphatase family MPE_RS15175 PF02503 Polyphosphate kinase middle domain MPE_RS15175 PF13090 Polyphosphate kinase C-terminal domain 2 MPE_RS15175 PF17941 Polyphosphate kinase C-terminal domain 1 MPE_RS15175 PF13089 Polyphosphate kinase N-terminal domain MPE_RS15180 PF13609 Gram-negative porin MPE_RS15185 PF03922 OmpW family MPE_RS15190 PF13439 Glycosyltransferase Family 4 MPE_RS15190 PF00534 Glycosyl transferases group 1 MPE_RS15210 PF01384 Phosphate transporter family MPE_RS15220 PF01712 Deoxynucleoside kinase MPE_RS15230 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MPE_RS15235 PF12627 Probable RNA and SrmB- binding site of polymerase A MPE_RS15235 PF01743 Poly A polymerase head domain MPE_RS15235 PF12626 Polymerase A arginine-rich C-terminus MPE_RS15245 PF00308 Bacterial dnaA protein MPE_RS15245 PF08299 Bacterial dnaA protein helix-turn-helix MPE_RS15245 PF11638 DnaA N-terminal domain MPE_RS15250 PF01594 AI-2E family transporter MPE_RS15255 PF13369 Transglutaminase-like superfamily MPE_RS15265 PF03023 Lipid II flippase MurJ MPE_RS15270 PF01649 Ribosomal protein S20 MPE_RS15280 PF00202 Aminotransferase class-III MPE_RS15285 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MPE_RS15285 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MPE_RS15295 PF03793 PASTA domain MPE_RS15295 PF00069 Protein kinase domain MPE_RS15300 PF01062 Bestrophin, RFP-TM, chloride channel MPE_RS15310 PF00764 Arginosuccinate synthase MPE_RS15325 PF01329 Pterin 4 alpha carbinolamine dehydratase MPE_RS15330 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MPE_RS15330 PF01565 FAD binding domain MPE_RS15335 PF04461 Protein of unknown function (DUF520) MPE_RS15350 PF00849 RNA pseudouridylate synthase MPE_RS15350 PF01479 S4 domain MPE_RS15355 PF00072 Response regulator receiver domain MPE_RS15355 PF00196 Bacterial regulatory proteins, luxR family MPE_RS15360 PF07730 Histidine kinase MPE_RS15360 PF00672 HAMP domain MPE_RS15360 PF16448 LapD/MoxY periplasmic domain MPE_RS15365 PF01687 Riboflavin kinase MPE_RS15365 PF06574 FAD synthetase MPE_RS15370 PF06827 Zinc finger found in FPG and IleRS MPE_RS15370 PF00133 tRNA synthetases class I (I, L, M and V) MPE_RS15370 PF08264 Anticodon-binding domain of tRNA MPE_RS15375 PF01252 Signal peptidase (SPase) II MPE_RS15385 PF00107 Zinc-binding dehydrogenase MPE_RS15385 PF08240 Alcohol dehydrogenase GroES-like domain MPE_RS15395 PF00892 EamA-like transporter family MPE_RS15400 PF00563 EAL domain MPE_RS15400 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS15400 PF13188 PAS domain MPE_RS15400 PF03707 Bacterial signalling protein N terminal repeat MPE_RS15410 PF00892 EamA-like transporter family MPE_RS15420 PF01970 Tripartite tricarboxylate transporter TctA family MPE_RS15425 PF07331 Tripartite tricarboxylate transporter TctB family MPE_RS15430 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MPE_RS15430 PF00437 Type II/IV secretion system protein MPE_RS15445 PF01026 TatD related DNase MPE_RS15460 PF00700 Bacterial flagellin C-terminal helical region MPE_RS15460 PF00669 Bacterial flagellin N-terminal helical region MPE_RS15465 PF00460 Flagella basal body rod protein MPE_RS15465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MPE_RS15470 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MPE_RS15470 PF10135 Rod binding protein MPE_RS15475 PF02119 Flagellar P-ring protein MPE_RS15480 PF02107 Flagellar L-ring protein MPE_RS15485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MPE_RS15485 PF00460 Flagella basal body rod protein MPE_RS15490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MPE_RS15490 PF00460 Flagella basal body rod protein MPE_RS15495 PF07559 Flagellar basal body protein FlaE MPE_RS15495 PF00460 Flagella basal body rod protein MPE_RS15495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MPE_RS15500 PF03963 Flagellar hook capping protein - N-terminal region MPE_RS15500 PF13861 FlgD Tudor-like domain MPE_RS15500 PF13860 FlgD Ig-like domain MPE_RS15505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MPE_RS15505 PF00460 Flagella basal body rod protein MPE_RS15510 PF00460 Flagella basal body rod protein MPE_RS15515 PF17656 FlgA N-terminal domain MPE_RS15515 PF13144 Chaperone for flagella basal body P-ring formation MPE_RS15530 PF01312 FlhB HrpN YscU SpaS Family MPE_RS15535 PF00771 FHIPEP family MPE_RS15540 PF00448 SRP54-type protein, GTPase domain MPE_RS15550 PF04545 Sigma-70, region 4 MPE_RS15550 PF04542 Sigma-70 region 2 MPE_RS15550 PF04539 Sigma-70 region 3 MPE_RS15555 PF00672 HAMP domain MPE_RS15555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS15555 PF17200 Single Cache domain 2 MPE_RS15565 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain MPE_RS15565 PF06974 Protein of unknown function (DUF1298) MPE_RS15590 PF00672 HAMP domain MPE_RS15590 PF00909 Ammonium Transporter Family MPE_RS15595 PF00384 Molybdopterin oxidoreductase MPE_RS15595 PF01568 Molydopterin dinucleotide binding domain MPE_RS15595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MPE_RS15605 PF07687 Peptidase dimerisation domain MPE_RS15605 PF01546 Peptidase family M20/M25/M40 MPE_RS15615 PF00342 Phosphoglucose isomerase MPE_RS15620 PF00923 Transaldolase/Fructose-6-phosphate aldolase MPE_RS15635 PF04333 MlaA lipoprotein MPE_RS15640 PF02470 MlaD protein MPE_RS15645 PF02405 Permease MlaE MPE_RS15650 PF00005 ABC transporter MPE_RS15655 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS15655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MPE_RS15660 PF00310 Glutamine amidotransferases class-II MPE_RS15660 PF01493 GXGXG motif MPE_RS15660 PF04898 Glutamate synthase central domain MPE_RS15660 PF01645 Conserved region in glutamate synthase MPE_RS15670 PF00267 Gram-negative porin MPE_RS15675 PF01966 HD domain MPE_RS15675 PF13286 Phosphohydrolase-associated domain MPE_RS15680 PF01761 3-dehydroquinate synthase MPE_RS15685 PF01202 Shikimate kinase MPE_RS15690 PF11741 AMIN domain MPE_RS15690 PF03958 Bacterial type II/III secretion system short domain MPE_RS15690 PF00263 Bacterial type II and III secretion system protein MPE_RS15690 PF07660 Secretin and TonB N terminus short domain MPE_RS15705 PF05137 Fimbrial assembly protein (PilN) MPE_RS15710 PF11104 Type IV pilus assembly protein PilM; MPE_RS15715 PF00905 Penicillin binding protein transpeptidase domain MPE_RS15715 PF17092 Penicillin-binding protein OB-like domain MPE_RS15715 PF00912 Transglycosylase MPE_RS15720 PF01491 Frataxin-like domain MPE_RS15725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MPE_RS15725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MPE_RS15730 PF00005 ABC transporter MPE_RS15730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MPE_RS15735 PF00005 ABC transporter MPE_RS15735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MPE_RS15740 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS15740 PF12911 N-terminal TM domain of oligopeptide transport permease C MPE_RS15745 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS15755 PF13609 Gram-negative porin MPE_RS15760 PF03232 Ubiquinone biosynthesis protein COQ7 MPE_RS15770 PF00585 C-terminal regulatory domain of Threonine dehydratase MPE_RS15770 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS15775 PF02277 Phosphoribosyltransferase MPE_RS15785 PF08334 Type II secretion system (T2SS), protein G MPE_RS15785 PF07963 Prokaryotic N-terminal methylation motif MPE_RS15795 PF02501 Type II secretion system (T2SS), protein I MPE_RS15795 PF07963 Prokaryotic N-terminal methylation motif MPE_RS15800 PF11612 Type II secretion system (T2SS), protein J MPE_RS15800 PF07963 Prokaryotic N-terminal methylation motif MPE_RS15825 PF00263 Bacterial type II and III secretion system protein MPE_RS15825 PF03958 Bacterial type II/III secretion system short domain MPE_RS15830 PF00437 Type II/IV secretion system protein MPE_RS15835 PF00482 Type II secretion system (T2SS), protein F MPE_RS15845 PF02190 ATP-dependent protease La (LON) substrate-binding domain MPE_RS15845 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS15845 PF05362 Lon protease (S16) C-terminal proteolytic domain MPE_RS15860 PF03401 Tripartite tricarboxylate transporter family receptor MPE_RS15870 PF02580 D-Tyr-tRNA(Tyr) deacylase MPE_RS15875 PF01545 Cation efflux family MPE_RS15875 PF16916 Dimerisation domain of Zinc Transporter MPE_RS15890 PF00486 Transcriptional regulatory protein, C terminal MPE_RS15890 PF00072 Response regulator receiver domain MPE_RS15895 PF08521 Two-component sensor kinase N-terminal MPE_RS15895 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS15895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS15900 PF00579 tRNA synthetases class I (W and Y) MPE_RS15900 PF01479 S4 domain MPE_RS15905 PF08460 Bacterial SH3 domain MPE_RS15905 PF01551 Peptidase family M23 MPE_RS15910 PF03702 Anhydro-N-acetylmuramic acid kinase MPE_RS15915 PF01521 Iron-sulphur cluster biosynthesis MPE_RS15930 PF00380 Ribosomal protein S9/S16 MPE_RS15935 PF00572 Ribosomal protein L13 MPE_RS15950 PF01636 Phosphotransferase enzyme family MPE_RS15955 PF00183 Hsp90 protein MPE_RS15955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS15965 PF04107 Glutamate-cysteine ligase family 2(GCS2) MPE_RS15980 PF06071 Protein of unknown function (DUF933) MPE_RS15980 PF01926 50S ribosome-binding GTPase MPE_RS15985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS15985 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS15985 PF18415 Histidine kinase receptor ArcB trans-membrane domain MPE_RS15985 PF01627 Hpt domain MPE_RS15985 PF00989 PAS fold MPE_RS15985 PF00072 Response regulator receiver domain MPE_RS15990 PF08521 Two-component sensor kinase N-terminal MPE_RS15990 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS15995 PF00486 Transcriptional regulatory protein, C terminal MPE_RS15995 PF00072 Response regulator receiver domain MPE_RS16000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS16000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS16000 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS16005 PF04542 Sigma-70 region 2 MPE_RS16005 PF04545 Sigma-70, region 4 MPE_RS16005 PF00140 Sigma-70 factor, region 1.2 MPE_RS16010 PF02630 SCO1/SenC MPE_RS16015 PF01040 UbiA prenyltransferase family MPE_RS16040 PF00510 Cytochrome c oxidase subunit III MPE_RS16050 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MPE_RS16055 PF00115 Cytochrome C and Quinol oxidase polypeptide I MPE_RS16060 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MPE_RS16060 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MPE_RS16070 PF08241 Methyltransferase domain MPE_RS16075 PF00156 Phosphoribosyl transferase domain MPE_RS16080 PF00588 SpoU rRNA Methylase family MPE_RS16085 PF01627 Hpt domain MPE_RS16085 PF01584 CheW-like domain MPE_RS16085 PF00072 Response regulator receiver domain MPE_RS16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS16090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS16090 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MPE_RS16100 PF00072 Response regulator receiver domain MPE_RS16105 PF00072 Response regulator receiver domain MPE_RS16110 PF00301 Rubredoxin MPE_RS16120 PF00202 Aminotransferase class-III MPE_RS16125 PF01263 Aldose 1-epimerase MPE_RS16140 PF01225 Mur ligase family, catalytic domain MPE_RS16140 PF02875 Mur ligase family, glutamate ligase domain MPE_RS16140 PF08245 Mur ligase middle domain MPE_RS16145 PF05728 Uncharacterised protein family (UPF0227) MPE_RS16150 PF00773 RNB domain MPE_RS16160 PF01488 Shikimate / quinate 5-dehydrogenase MPE_RS16160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MPE_RS16160 PF08501 Shikimate dehydrogenase substrate binding domain MPE_RS16165 PF00912 Transglycosylase MPE_RS16175 PF00578 AhpC/TSA family MPE_RS16180 PF01220 Dehydroquinase class II MPE_RS16185 PF00364 Biotin-requiring enzyme MPE_RS16190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MPE_RS16190 PF02785 Biotin carboxylase C-terminal domain MPE_RS16190 PF00289 Biotin carboxylase, N-terminal domain MPE_RS16205 PF00294 pfkB family carbohydrate kinase MPE_RS16220 PF00268 Ribonucleotide reductase, small chain MPE_RS16225 PF00317 Ribonucleotide reductase, all-alpha domain MPE_RS16225 PF02867 Ribonucleotide reductase, barrel domain MPE_RS16225 PF03477 ATP cone domain MPE_RS16230 PF01510 N-acetylmuramoyl-L-alanine amidase MPE_RS16235 PF02954 Bacterial regulatory protein, Fis family MPE_RS16235 PF00072 Response regulator receiver domain MPE_RS16235 PF00158 Sigma-54 interaction domain MPE_RS16240 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS16255 PF02881 SRP54-type protein, helical bundle domain MPE_RS16255 PF02978 Signal peptide binding domain MPE_RS16255 PF00448 SRP54-type protein, GTPase domain MPE_RS16265 PF00448 SRP54-type protein, GTPase domain MPE_RS16265 PF02881 SRP54-type protein, helical bundle domain MPE_RS16275 PF01467 Cytidylyltransferase-like MPE_RS16280 PF00037 4Fe-4S binding domain MPE_RS16290 PF01195 Peptidyl-tRNA hydrolase MPE_RS16295 PF14693 Ribosomal protein TL5, C-terminal domain MPE_RS16295 PF01386 Ribosomal L25p family MPE_RS16300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MPE_RS16300 PF14572 Phosphoribosyl synthetase-associated domain MPE_RS16310 PF00288 GHMP kinases N terminal domain MPE_RS16325 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MPE_RS16325 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MPE_RS16325 PF06827 Zinc finger found in FPG and IleRS MPE_RS16335 PF14815 NUDIX domain MPE_RS16335 PF00633 Helix-hairpin-helix motif MPE_RS16335 PF10576 Iron-sulfur binding domain of endonuclease III MPE_RS16335 PF00730 HhH-GPD superfamily base excision DNA repair protein MPE_RS16340 PF01330 RuvA N terminal domain MPE_RS16340 PF07499 RuvA, C-terminal domain MPE_RS16345 PF00196 Bacterial regulatory proteins, luxR family MPE_RS16345 PF00072 Response regulator receiver domain MPE_RS16350 PF07730 Histidine kinase MPE_RS16350 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MPE_RS16350 PF00672 HAMP domain MPE_RS16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS16355 PF02562 PhoH-like protein MPE_RS16360 PF02130 Uncharacterized protein family UPF0054 MPE_RS16365 PF07885 Ion channel MPE_RS16365 PF17655 Inward rectifier potassium channel C-terminal domain MPE_RS16370 PF17785 PUA-like domain MPE_RS16370 PF10672 S-adenosylmethionine-dependent methyltransferase MPE_RS16375 PF02899 Phage integrase, N-terminal SAM-like domain MPE_RS16375 PF00589 Phage integrase family MPE_RS16385 PF01678 Diaminopimelate epimerase MPE_RS16395 PF03060 Nitronate monooxygenase MPE_RS16400 PF00561 alpha/beta hydrolase fold MPE_RS16410 PF03279 Bacterial lipid A biosynthesis acyltransferase MPE_RS16420 PF00438 S-adenosylmethionine synthetase, N-terminal domain MPE_RS16420 PF02773 S-adenosylmethionine synthetase, C-terminal domain MPE_RS16420 PF02772 S-adenosylmethionine synthetase, central domain MPE_RS16425 PF03466 LysR substrate binding domain MPE_RS16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS16430 PF03328 HpcH/HpaI aldolase/citrate lyase family MPE_RS16435 PF00311 Phosphoenolpyruvate carboxylase MPE_RS16440 PF02629 CoA binding domain MPE_RS16440 PF00549 CoA-ligase MPE_RS16445 PF00549 CoA-ligase MPE_RS16445 PF08442 ATP-grasp domain MPE_RS16450 PF04961 Formiminotransferase-cyclodeaminase MPE_RS16455 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal MPE_RS16460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MPE_RS16460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MPE_RS16465 PF00266 Aminotransferase class-V MPE_RS16470 PF00464 Serine hydroxymethyltransferase MPE_RS16475 PF05161 MOFRL family MPE_RS16475 PF13660 Domain of unknown function (DUF4147) MPE_RS16480 PF01268 Formate--tetrahydrofolate ligase MPE_RS16485 PF02875 Mur ligase family, glutamate ligase domain MPE_RS16485 PF08245 Mur ligase middle domain MPE_RS16510 PF09997 Predicted membrane protein (DUF2238) MPE_RS16520 PF02566 OsmC-like protein MPE_RS16550 PF17863 AAA lid domain MPE_RS16550 PF07726 ATPase family associated with various cellular activities (AAA) MPE_RS16555 PF14525 AraC-binding-like domain MPE_RS16560 PF01494 FAD binding domain MPE_RS16565 PF03144 Elongation factor Tu domain 2 MPE_RS16565 PF16658 Class II release factor RF3, C-terminal domain MPE_RS16565 PF00009 Elongation factor Tu GTP binding domain MPE_RS16570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS16570 PF03466 LysR substrate binding domain MPE_RS16580 PF02798 Glutathione S-transferase, N-terminal domain MPE_RS16585 PF05221 S-adenosyl-L-homocysteine hydrolase MPE_RS16585 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MPE_RS16590 PF01728 FtsJ-like methyltransferase MPE_RS16590 PF01479 S4 domain MPE_RS16595 PF02219 Methylenetetrahydrofolate reductase MPE_RS16600 PF03976 Polyphosphate kinase 2 (PPK2) MPE_RS16605 PF03922 OmpW family MPE_RS16625 PF03466 LysR substrate binding domain MPE_RS16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS16630 PF01464 Transglycosylase SLT domain MPE_RS16630 PF14718 Soluble lytic murein transglycosylase L domain MPE_RS16635 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family MPE_RS16640 PF13417 Glutathione S-transferase, N-terminal domain MPE_RS16640 PF00043 Glutathione S-transferase, C-terminal domain MPE_RS16650 PF01966 HD domain MPE_RS16650 PF01743 Poly A polymerase head domain MPE_RS16650 PF12627 Probable RNA and SrmB- binding site of polymerase A MPE_RS16655 PF13386 Cytochrome C biogenesis protein transmembrane region MPE_RS16660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MPE_RS16660 PF00672 HAMP domain MPE_RS16660 PF12729 Four helix bundle sensory module for signal transduction MPE_RS16675 PF01695 IstB-like ATP binding protein MPE_RS16680 PF00665 Integrase core domain MPE_RS16690 PF04945 YHS domain MPE_RS16690 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS16695 PF02406 MmoB/DmpM family MPE_RS16700 PF02332 Methane/Phenol/Toluene Hydroxylase MPE_RS16705 PF06099 Phenol hydroxylase subunit MPE_RS16710 PF02830 V4R domain MPE_RS16710 PF06505 Activator of aromatic catabolism MPE_RS16710 PF02954 Bacterial regulatory protein, Fis family MPE_RS16710 PF00158 Sigma-54 interaction domain MPE_RS16715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS16720 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS16725 PF03466 LysR substrate binding domain MPE_RS16745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS16745 PF03466 LysR substrate binding domain MPE_RS16750 PF02525 Flavodoxin-like fold MPE_RS16765 PF00682 HMGL-like MPE_RS16765 PF07836 DmpG-like communication domain MPE_RS16770 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation MPE_RS16770 PF01118 Semialdehyde dehydrogenase, NAD binding domain MPE_RS16775 PF01361 Tautomerase enzyme MPE_RS16785 PF01557 Fumarylacetoacetate (FAA) hydrolase family MPE_RS16790 PF00171 Aldehyde dehydrogenase family MPE_RS16795 PF05598 Transposase domain (DUF772) MPE_RS16795 PF01609 Transposase DDE domain MPE_RS16800 PF00171 Aldehyde dehydrogenase family MPE_RS16810 PF07804 HipA-like C-terminal domain MPE_RS16810 PF13657 HipA N-terminal domain MPE_RS16825 PF10415 Fumarase C C-terminus MPE_RS16825 PF00206 Lyase MPE_RS16830 PF01628 HrcA protein C terminal domain MPE_RS16830 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding MPE_RS16835 PF01513 ATP-NAD kinase MPE_RS16840 PF02463 RecF/RecN/SMC N terminal domain MPE_RS16845 PF03668 P-loop ATPase protein family MPE_RS16855 PF00282 Pyridoxal-dependent decarboxylase conserved domain MPE_RS16880 PF03776 Septum formation topological specificity factor MinE MPE_RS16885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MPE_RS16890 PF05209 Septum formation inhibitor MinC, N-terminal domain MPE_RS16890 PF03775 Septum formation inhibitor MinC, C-terminal domain MPE_RS16895 PF17760 UvrA interaction domain MPE_RS16895 PF17755 UvrA DNA-binding domain MPE_RS16895 PF00005 ABC transporter MPE_RS16910 PF08946 Osmosensory transporter coiled coil MPE_RS16910 PF00083 Sugar (and other) transporter MPE_RS16930 PF00682 HMGL-like MPE_RS16940 PF00364 Biotin-requiring enzyme MPE_RS16940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MPE_RS16940 PF02785 Biotin carboxylase C-terminal domain MPE_RS16940 PF00289 Biotin carboxylase, N-terminal domain MPE_RS16950 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS16955 PF01039 Carboxyl transferase domain MPE_RS16960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MPE_RS16960 PF02770 Acyl-CoA dehydrogenase, middle domain MPE_RS16960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MPE_RS16970 PF01323 DSBA-like thioredoxin domain MPE_RS16975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MPE_RS16975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MPE_RS16985 PF03480 Bacterial extracellular solute-binding protein, family 7 MPE_RS16990 PF01810 LysE type translocator MPE_RS16995 PF02803 Thiolase, C-terminal domain MPE_RS16995 PF00108 Thiolase, N-terminal domain MPE_RS17000 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) MPE_RS17005 PF00484 Carbonic anhydrase MPE_RS17020 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS17025 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS17035 PF00005 ABC transporter MPE_RS17035 PF08402 TOBE domain MPE_RS17040 PF01177 Asp/Glu/Hydantoin racemase MPE_RS17050 PF01553 Acyltransferase MPE_RS17060 PF02092 Glycyl-tRNA synthetase beta subunit MPE_RS17060 PF05746 DALR anticodon binding domain MPE_RS17065 PF02091 Glycyl-tRNA synthetase alpha subunit MPE_RS17070 PF00067 Cytochrome P450 MPE_RS17080 PF00795 Carbon-nitrogen hydrolase MPE_RS17085 PF03471 Transporter associated domain MPE_RS17085 PF00571 CBS domain MPE_RS17090 PF02492 CobW/HypB/UreG, nucleotide-binding domain MPE_RS17090 PF07683 Cobalamin synthesis protein cobW C-terminal domain MPE_RS17095 PF01258 Prokaryotic dksA/traR C4-type zinc finger MPE_RS17105 PF00227 Proteasome subunit MPE_RS17110 PF00004 ATPase family associated with various cellular activities (AAA) MPE_RS17110 PF07724 AAA domain (Cdc48 subfamily) MPE_RS17115 PF03309 Type III pantothenate kinase MPE_RS17135 PF13360 PQQ-like domain MPE_RS17145 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS17175 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus MPE_RS17175 PF01048 Phosphorylase superfamily MPE_RS17180 PF14492 Elongation Factor G, domain II MPE_RS17180 PF00009 Elongation factor Tu GTP binding domain MPE_RS17180 PF03764 Elongation factor G, domain IV MPE_RS17180 PF00679 Elongation factor G C-terminus MPE_RS17185 PF07963 Prokaryotic N-terminal methylation motif MPE_RS17185 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor MPE_RS17210 PF05567 Neisseria PilC beta-propeller domain MPE_RS17230 PF02625 XdhC and CoxI family MPE_RS17230 PF13478 XdhC Rossmann domain MPE_RS17235 PF00005 ABC transporter MPE_RS17240 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS17250 PF02683 Cytochrome C biogenesis protein transmembrane region MPE_RS17250 PF11412 Disulphide bond corrector protein DsbC MPE_RS17255 PF01196 Ribosomal protein L17 MPE_RS17260 PF01000 RNA polymerase Rpb3/RpoA insert domain MPE_RS17260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MPE_RS17260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MPE_RS17265 PF00163 Ribosomal protein S4/S9 N-terminal domain MPE_RS17265 PF01479 S4 domain MPE_RS17270 PF00411 Ribosomal protein S11 MPE_RS17275 PF00416 Ribosomal protein S13/S18 MPE_RS17280 PF00444 Ribosomal protein L36 MPE_RS17285 PF01176 Translation initiation factor 1A / IF-1 MPE_RS17290 PF00344 SecY translocase MPE_RS17295 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MPE_RS17300 PF00327 Ribosomal protein L30p/L7e MPE_RS17305 PF03719 Ribosomal protein S5, C-terminal domain MPE_RS17305 PF00333 Ribosomal protein S5, N-terminal domain MPE_RS17310 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MPE_RS17315 PF00347 Ribosomal protein L6 MPE_RS17320 PF00410 Ribosomal protein S8 MPE_RS17325 PF00253 Ribosomal protein S14p/S29e MPE_RS17330 PF00281 Ribosomal protein L5 MPE_RS17330 PF00673 ribosomal L5P family C-terminus MPE_RS17335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MPE_RS17340 PF00238 Ribosomal protein L14p/L23e MPE_RS17345 PF08534 Redoxin MPE_RS17350 PF00366 Ribosomal protein S17 MPE_RS17355 PF00831 Ribosomal L29 protein MPE_RS17360 PF00252 Ribosomal protein L16p/L10e MPE_RS17365 PF07650 KH domain MPE_RS17365 PF00189 Ribosomal protein S3, C-terminal domain MPE_RS17370 PF00237 Ribosomal protein L22p/L17e MPE_RS17375 PF00203 Ribosomal protein S19 MPE_RS17380 PF03947 Ribosomal Proteins L2, C-terminal domain MPE_RS17380 PF00181 Ribosomal Proteins L2, RNA binding domain MPE_RS17385 PF00276 Ribosomal protein L23 MPE_RS17390 PF00573 Ribosomal protein L4/L1 family MPE_RS17395 PF00297 Ribosomal protein L3 MPE_RS17400 PF00338 Ribosomal protein S10p/S20e MPE_RS17405 PF00009 Elongation factor Tu GTP binding domain MPE_RS17405 PF03144 Elongation factor Tu domain 2 MPE_RS17405 PF03143 Elongation factor Tu C-terminal domain MPE_RS17410 PF14492 Elongation Factor G, domain II MPE_RS17410 PF03764 Elongation factor G, domain IV MPE_RS17410 PF00009 Elongation factor Tu GTP binding domain MPE_RS17410 PF03144 Elongation factor Tu domain 2 MPE_RS17410 PF00679 Elongation factor G C-terminus MPE_RS17415 PF00177 Ribosomal protein S7p/S5e MPE_RS17420 PF00164 Ribosomal protein S12/S23 MPE_RS17430 PF04997 RNA polymerase Rpb1, domain 1 MPE_RS17430 PF00623 RNA polymerase Rpb1, domain 2 MPE_RS17430 PF04983 RNA polymerase Rpb1, domain 3 MPE_RS17430 PF04998 RNA polymerase Rpb1, domain 5 MPE_RS17430 PF05000 RNA polymerase Rpb1, domain 4 MPE_RS17435 PF00562 RNA polymerase Rpb2, domain 6 MPE_RS17435 PF04560 RNA polymerase Rpb2, domain 7 MPE_RS17435 PF04565 RNA polymerase Rpb2, domain 3 MPE_RS17435 PF04561 RNA polymerase Rpb2, domain 2 MPE_RS17435 PF10385 RNA polymerase beta subunit external 1 domain MPE_RS17435 PF04563 RNA polymerase beta subunit MPE_RS17440 PF16320 Ribosomal protein L7/L12 dimerisation domain MPE_RS17440 PF00542 Ribosomal protein L7/L12 C-terminal domain MPE_RS17445 PF00466 Ribosomal protein L10 MPE_RS17450 PF00687 Ribosomal protein L1p/L10e family MPE_RS17455 PF00298 Ribosomal protein L11, RNA binding domain MPE_RS17455 PF03946 Ribosomal protein L11, N-terminal domain MPE_RS17460 PF02357 Transcription termination factor nusG MPE_RS17460 PF00467 KOW motif MPE_RS17465 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MPE_RS17475 PF03143 Elongation factor Tu C-terminal domain MPE_RS17475 PF00009 Elongation factor Tu GTP binding domain MPE_RS17475 PF03144 Elongation factor Tu domain 2 MPE_RS17495 PF03167 Uracil DNA glycosylase superfamily MPE_RS17500 PF00218 Indole-3-glycerol phosphate synthase MPE_RS17505 PF00591 Glycosyl transferase family, a/b domain MPE_RS17505 PF02885 Glycosyl transferase family, helical bundle domain MPE_RS17510 PF00117 Glutamine amidotransferase class-I MPE_RS17515 PF04715 Anthranilate synthase component I, N terminal region MPE_RS17515 PF00425 chorismate binding enzyme MPE_RS17530 PF00834 Ribulose-phosphate 3 epimerase family MPE_RS17540 PF04379 ApaG domain MPE_RS17550 PF03562 MltA specific insert domain MPE_RS17550 PF06725 3D domain MPE_RS17570 PF00534 Glycosyl transferases group 1 MPE_RS17570 PF13439 Glycosyltransferase Family 4 MPE_RS17575 PF00586 AIR synthase related protein, N-terminal domain MPE_RS17575 PF02769 AIR synthase related protein, C-terminal domain MPE_RS17590 PF00795 Carbon-nitrogen hydrolase MPE_RS17610 PF00581 Rhodanese-like domain MPE_RS17620 PF02560 Cyanate lyase C-terminal domain MPE_RS17625 PF00005 ABC transporter MPE_RS17630 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS17640 PF13180 PDZ domain MPE_RS17650 PF00582 Universal stress protein family MPE_RS17665 PF10996 Beta-Casp domain MPE_RS17665 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MPE_RS17665 PF00753 Metallo-beta-lactamase superfamily MPE_RS17670 PF00072 Response regulator receiver domain MPE_RS17670 PF00196 Bacterial regulatory proteins, luxR family MPE_RS17675 PF07730 Histidine kinase MPE_RS17675 PF05231 MASE1 MPE_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS17705 PF01037 Lrp/AsnC ligand binding domain MPE_RS17720 PF02253 Phospholipase A1 MPE_RS17735 PF04264 YceI-like domain MPE_RS17750 PF12592 Protein of unknown function (DUF3763) MPE_RS17750 PF17868 AAA lid domain MPE_RS17750 PF07728 AAA domain (dynein-related subfamily) MPE_RS17770 PF09423 PhoD-like phosphatase MPE_RS17770 PF16655 PhoD-like phosphatase, N-terminal domain MPE_RS17780 PF03466 LysR substrate binding domain MPE_RS17780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS17785 PF01810 LysE type translocator MPE_RS17790 PF01266 FAD dependent oxidoreductase MPE_RS17805 PF03466 LysR substrate binding domain MPE_RS17805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS17810 PF00171 Aldehyde dehydrogenase family MPE_RS17830 PF05036 Sporulation related domain MPE_RS17830 PF03330 Lytic transglycolase MPE_RS17835 PF03330 Lytic transglycolase MPE_RS17835 PF05036 Sporulation related domain MPE_RS17845 PF02627 Carboxymuconolactone decarboxylase family MPE_RS17855 PF01261 Xylose isomerase-like TIM barrel MPE_RS17860 PF09278 MerR, DNA binding MPE_RS17860 PF00376 MerR family regulatory protein MPE_RS17865 PF00403 Heavy-metal-associated domain MPE_RS17880 PF01565 FAD binding domain MPE_RS17900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS17920 PF00551 Formyl transferase MPE_RS17925 PF04542 Sigma-70 region 2 MPE_RS17925 PF04545 Sigma-70, region 4 MPE_RS17940 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MPE_RS17950 PF01063 Amino-transferase class IV MPE_RS17965 PF03992 Antibiotic biosynthesis monooxygenase MPE_RS17970 PF18073 Rubredoxin metal binding domain MPE_RS17975 PF00472 RF-1 domain MPE_RS17980 PF03061 Thioesterase superfamily MPE_RS17990 PF04226 Transglycosylase associated protein MPE_RS18000 PF00842 Alanine racemase, C-terminal domain MPE_RS18000 PF01168 Alanine racemase, N-terminal domain MPE_RS18005 PF07690 Major Facilitator Superfamily MPE_RS18025 PF00293 NUDIX domain MPE_RS18030 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MPE_RS18030 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MPE_RS18035 PF02261 Aspartate decarboxylase MPE_RS18040 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MPE_RS18045 PF02233 NAD(P) transhydrogenase beta subunit MPE_RS18050 PF00501 AMP-binding enzyme MPE_RS18050 PF13193 AMP-binding enzyme C-terminal domain MPE_RS18060 PF01048 Phosphorylase superfamily MPE_RS18080 PF07687 Peptidase dimerisation domain MPE_RS18080 PF01546 Peptidase family M20/M25/M40 MPE_RS18085 PF00529 HlyD membrane-fusion protein of T1SS MPE_RS18085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS18090 PF00873 AcrB/AcrD/AcrF family MPE_RS18095 PF02321 Outer membrane efflux protein MPE_RS18105 PF00561 alpha/beta hydrolase fold MPE_RS18105 PF07021 Methionine biosynthesis protein MetW MPE_RS18110 PF00561 alpha/beta hydrolase fold MPE_RS18115 PF00072 Response regulator receiver domain MPE_RS18120 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS18120 PF01627 Hpt domain MPE_RS18120 PF00497 Bacterial extracellular solute-binding proteins, family 3 MPE_RS18120 PF00072 Response regulator receiver domain MPE_RS18120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS18140 PF12399 Branched-chain amino acid ATP-binding cassette transporter MPE_RS18140 PF00005 ABC transporter MPE_RS18145 PF00005 ABC transporter MPE_RS18150 PF03069 Acetamidase/Formamidase family MPE_RS18165 PF07690 Major Facilitator Superfamily MPE_RS18175 PF01037 Lrp/AsnC ligand binding domain MPE_RS18180 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS18190 PF03069 Acetamidase/Formamidase family MPE_RS18200 PF07237 Protein of unknown function (DUF1428) MPE_RS18205 PF01425 Amidase MPE_RS18255 PF04055 Radical SAM superfamily MPE_RS18260 PF00795 Carbon-nitrogen hydrolase MPE_RS18265 PF08406 CbbQ/NirQ/NorQ C-terminal MPE_RS18265 PF07728 AAA domain (dynein-related subfamily) MPE_RS18270 PF00092 von Willebrand factor type A domain MPE_RS18275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MPE_RS18285 PF00561 alpha/beta hydrolase fold MPE_RS18290 PF01645 Conserved region in glutamate synthase MPE_RS18295 PF00196 Bacterial regulatory proteins, luxR family MPE_RS18295 PF00072 Response regulator receiver domain MPE_RS18305 PF00043 Glutathione S-transferase, C-terminal domain MPE_RS18305 PF13417 Glutathione S-transferase, N-terminal domain MPE_RS18310 PF08328 Adenylosuccinate lyase C-terminal MPE_RS18310 PF00206 Lyase MPE_RS18315 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MPE_RS18320 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MPE_RS18325 PF00111 2Fe-2S iron-sulfur cluster binding domain MPE_RS18325 PF01799 [2Fe-2S] binding domain MPE_RS18330 PF13230 Glutamine amidotransferases class-II MPE_RS18335 PF10005 zinc-ribbon domain MPE_RS18335 PF15887 Putative zinc-binding metallo-peptidase MPE_RS18340 PF12091 Protein of unknown function (DUF3567) MPE_RS18380 PF01565 FAD binding domain MPE_RS18380 PF02913 FAD linked oxidases, C-terminal domain MPE_RS18385 PF01565 FAD binding domain MPE_RS18390 PF13183 4Fe-4S dicluster domain MPE_RS18390 PF02754 Cysteine-rich domain MPE_RS18410 PF00892 EamA-like transporter family MPE_RS18430 PF00581 Rhodanese-like domain MPE_RS18435 PF09186 Domain of unknown function (DUF1949) MPE_RS18435 PF01205 Uncharacterized protein family UPF0029 MPE_RS18440 PF04381 Putative exonuclease, RdgC MPE_RS18450 PF00920 Dehydratase family MPE_RS18455 PF01571 Aminomethyltransferase folate-binding domain MPE_RS18455 PF08669 Glycine cleavage T-protein C-terminal barrel domain MPE_RS18455 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS18455 PF17806 Sarcosine oxidase A3 domain MPE_RS18460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MPE_RS18470 PF03480 Bacterial extracellular solute-binding protein, family 7 MPE_RS18475 PF12697 Alpha/beta hydrolase family MPE_RS18480 PF00465 Iron-containing alcohol dehydrogenase MPE_RS18485 PF07729 FCD domain MPE_RS18485 PF00392 Bacterial regulatory proteins, gntR family MPE_RS18495 PF13360 PQQ-like domain MPE_RS18495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MPE_RS18515 PF01266 FAD dependent oxidoreductase MPE_RS18515 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MPE_RS18520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MPE_RS18520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MPE_RS18540 PF18113 Rubredoxin binding C-terminal domain MPE_RS18540 PF07992 Pyridine nucleotide-disulphide oxidoreductase MPE_RS18550 PF00355 Rieske [2Fe-2S] domain MPE_RS18555 PF00301 Rubredoxin MPE_RS18565 PF02653 Branched-chain amino acid transport system / permease component MPE_RS18570 PF00005 ABC transporter MPE_RS18570 PF12399 Branched-chain amino acid ATP-binding cassette transporter MPE_RS18575 PF00005 ABC transporter MPE_RS18580 PF02515 CoA-transferase family III MPE_RS18585 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS18590 PF00892 EamA-like transporter family MPE_RS18595 PF14497 Glutathione S-transferase, C-terminal domain MPE_RS18595 PF02798 Glutathione S-transferase, N-terminal domain MPE_RS18605 PF00155 Aminotransferase class I and II MPE_RS18620 PF00255 Glutathione peroxidase MPE_RS18625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS18625 PF00072 Response regulator receiver domain MPE_RS18630 PF09084 NMT1/THI5 like MPE_RS18640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MPE_RS18655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MPE_RS18655 PF00005 ABC transporter MPE_RS18660 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS18665 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS18670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MPE_RS18680 PF01613 Flavin reductase like domain MPE_RS18685 PF01575 MaoC like domain MPE_RS18690 PF00440 Bacterial regulatory proteins, tetR family MPE_RS18695 PF00582 Universal stress protein family MPE_RS18705 PF02810 SEC-C motif MPE_RS18705 PF03695 Uncharacterised protein family (UPF0149) MPE_RS18720 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain MPE_RS18720 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain MPE_RS18740 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MPE_RS18740 PF00037 4Fe-4S binding domain MPE_RS18740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MPE_RS18745 PF01568 Molydopterin dinucleotide binding domain MPE_RS18745 PF00384 Molybdopterin oxidoreductase MPE_RS18745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MPE_RS18745 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MPE_RS18745 PF00037 4Fe-4S binding domain MPE_RS18765 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS18770 PF03459 TOBE domain MPE_RS18770 PF00005 ABC transporter MPE_RS18775 PF03475 3-alpha domain MPE_RS18775 PF03473 MOSC domain MPE_RS18780 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MPE_RS18785 PF03544 Gram-negative bacterial TonB protein C-terminal MPE_RS18790 PF01618 MotA/TolQ/ExbB proton channel family MPE_RS18795 PF02472 Biopolymer transport protein ExbD/TolR MPE_RS18800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MPE_RS18805 PF12704 MacB-like periplasmic core domain MPE_RS18805 PF02687 FtsX-like permease family MPE_RS18805 PF00005 ABC transporter MPE_RS18810 PF02321 Outer membrane efflux protein MPE_RS18815 PF07715 TonB-dependent Receptor Plug Domain MPE_RS18815 PF00593 TonB dependent receptor MPE_RS18820 PF18331 PKHD-type hydroxylase C-terminal domain MPE_RS18820 PF13640 2OG-Fe(II) oxygenase superfamily MPE_RS18825 PF00667 FAD binding domain MPE_RS18825 PF00175 Oxidoreductase NAD-binding domain MPE_RS18825 PF00258 Flavodoxin MPE_RS18830 PF02424 ApbE family MPE_RS18850 PF07715 TonB-dependent Receptor Plug Domain MPE_RS18850 PF00593 TonB dependent receptor MPE_RS18855 PF01553 Acyltransferase MPE_RS18860 PF01702 Queuine tRNA-ribosyltransferase MPE_RS18875 PF02547 Queuosine biosynthesis protein MPE_RS18880 PF17191 RecG wedge domain MPE_RS18880 PF00271 Helicase conserved C-terminal domain MPE_RS18880 PF00270 DEAD/DEAH box helicase MPE_RS18885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS18885 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MPE_RS18890 PF03466 LysR substrate binding domain MPE_RS18895 PF00141 Peroxidase MPE_RS18900 PF00210 Ferritin-like domain MPE_RS18905 PF13091 PLD-like domain MPE_RS18910 PF01040 UbiA prenyltransferase family MPE_RS18915 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MPE_RS18915 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MPE_RS18920 PF14748 Pyrroline-5-carboxylate reductase dimerisation MPE_RS18920 PF03807 NADP oxidoreductase coenzyme F420-dependent MPE_RS18930 PF01037 Lrp/AsnC ligand binding domain MPE_RS18940 PF13532 2OG-Fe(II) oxygenase superfamily MPE_RS18945 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA MPE_RS18950 PF02805 Metal binding domain of Ada MPE_RS18950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MPE_RS18950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MPE_RS18950 PF12833 Helix-turn-helix domain MPE_RS18955 PF00005 ABC transporter MPE_RS18955 PF12399 Branched-chain amino acid ATP-binding cassette transporter MPE_RS18960 PF00005 ABC transporter MPE_RS18970 PF02653 Branched-chain amino acid transport system / permease component MPE_RS18975 PF11862 Domain of unknown function (DUF3382) MPE_RS18975 PF02653 Branched-chain amino acid transport system / permease component MPE_RS18980 PF01168 Alanine racemase, N-terminal domain MPE_RS18985 PF00437 Type II/IV secretion system protein MPE_RS18995 PF00437 Type II/IV secretion system protein MPE_RS19000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MPE_RS19000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MPE_RS19005 PF04972 BON domain MPE_RS19010 PF13580 SIS domain MPE_RS19015 PF02021 Uncharacterised protein family UPF0102 MPE_RS19020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MPE_RS19030 PF01523 Putative modulator of DNA gyrase MPE_RS19035 PF00291 Pyridoxal-phosphate dependent enzyme MPE_RS19035 PF13291 ACT domain MPE_RS19040 PF00793 DAHP synthetase I family MPE_RS19050 PF01923 Cobalamin adenosyltransferase MPE_RS19055 PF01565 FAD binding domain MPE_RS19055 PF02913 FAD linked oxidases, C-terminal domain MPE_RS19065 PF03707 Bacterial signalling protein N terminal repeat MPE_RS19065 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS19065 PF00563 EAL domain MPE_RS19070 PF04293 SpoVR like protein MPE_RS19075 PF04285 Protein of unknown function (DUF444) MPE_RS19080 PF08298 PrkA AAA domain MPE_RS19080 PF06798 PrkA serine protein kinase C-terminal domain MPE_RS19085 PF17762 HTH domain found in ParB protein MPE_RS19085 PF02195 ParB-like nuclease domain MPE_RS19095 PF13614 AAA domain MPE_RS19110 PF08212 Lipocalin-like domain MPE_RS19115 PF02527 rRNA small subunit methyltransferase G MPE_RS19120 PF01134 Glucose inhibited division protein A MPE_RS19120 PF13932 GidA associated domain MPE_RS19125 PF03692 Putative zinc- or iron-chelating domain MPE_RS19135 PF00982 Glycosyltransferase family 20 MPE_RS19145 PF02358 Trehalose-phosphatase MPE_RS19150 PF00005 ABC transporter MPE_RS19150 PF03412 Peptidase C39 family MPE_RS19150 PF00664 ABC transporter transmembrane region MPE_RS19160 PF03472 Autoinducer binding domain MPE_RS19160 PF00196 Bacterial regulatory proteins, luxR family MPE_RS19170 PF13673 Acetyltransferase (GNAT) domain MPE_RS19175 PF12679 ABC-2 family transporter protein MPE_RS19180 PF00005 ABC transporter MPE_RS19190 PF01925 Sulfite exporter TauE/SafE MPE_RS19195 PF00732 GMC oxidoreductase MPE_RS19195 PF05199 GMC oxidoreductase MPE_RS19200 PF01914 MarC family integral membrane protein MPE_RS19205 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MPE_RS19210 PF00106 short chain dehydrogenase MPE_RS19225 PF01380 SIS domain MPE_RS19225 PF00571 CBS domain MPE_RS19230 PF00999 Sodium/hydrogen exchanger family MPE_RS19230 PF02254 TrkA-N domain MPE_RS19230 PF02080 TrkA-C domain MPE_RS19240 PF00156 Phosphoribosyl transferase domain MPE_RS19275 PF05598 Transposase domain (DUF772) MPE_RS19275 PF01609 Transposase DDE domain MPE_RS19295 PF14659 Phage integrase, N-terminal SAM-like domain MPE_RS19295 PF13356 Arm DNA-binding domain MPE_RS19295 PF00589 Phage integrase family MPE_RS19300 PF10396 GTP-binding protein TrmE N-terminus MPE_RS19300 PF12631 MnmE helical domain MPE_RS19300 PF01926 50S ribosome-binding GTPase MPE_RS19305 PF02096 60Kd inner membrane protein MPE_RS19305 PF14849 YidC periplasmic domain MPE_RS19310 PF01809 Putative membrane protein insertion efficiency factor MPE_RS19320 PF00468 Ribosomal protein L34 MPE_RS19340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS19340 PF00986 DNA gyrase B subunit, carboxyl terminus MPE_RS19340 PF00204 DNA gyrase B MPE_RS19340 PF18053 DNA gyrase B subunit insert domain MPE_RS19340 PF01751 Toprim domain MPE_RS19365 PF02384 N-6 DNA Methylase MPE_RS19395 PF13784 Fic/DOC family N-terminal MPE_RS19395 PF02661 Fic/DOC family MPE_RS19420 PF07681 DoxX MPE_RS19495 PF04352 ProQ/FINO family MPE_RS19495 PF17516 ProQ C-terminal domain MPE_RS19525 PF02470 MlaD protein MPE_RS19560 PF13091 PLD-like domain MPE_RS19605 PF02566 OsmC-like protein MPE_RS19645 PF00498 FHA domain MPE_RS19870 PF17760 UvrA interaction domain MPE_RS19870 PF17755 UvrA DNA-binding domain MPE_RS19960 PF00296 Luciferase-like monooxygenase MPE_RS20035 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS20050 PF00528 Binding-protein-dependent transport system inner membrane component MPE_RS20055 PF00005 ABC transporter MPE_RS20055 PF17850 CysA C-terminal regulatory domain MPE_RS20055 PF12857 TOBE-like domain MPE_RS20130 PF00486 Transcriptional regulatory protein, C terminal MPE_RS20130 PF00072 Response regulator receiver domain MPE_RS20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS20145 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS20145 PF00672 HAMP domain MPE_RS20200 PF07714 Protein tyrosine kinase MPE_RS20250 PF01494 FAD binding domain MPE_RS20315 PF00909 Ammonium Transporter Family MPE_RS20320 PF00909 Ammonium Transporter Family MPE_RS20355 PF02705 K+ potassium transporter MPE_RS20405 PF03594 Benzoate membrane transport protein MPE_RS20415 PF16326 ABC transporter C-terminal domain MPE_RS20415 PF12848 ABC transporter MPE_RS20415 PF00005 ABC transporter MPE_RS20445 PF00155 Aminotransferase class I and II MPE_RS20470 PF00155 Aminotransferase class I and II MPE_RS20480 PF00155 Aminotransferase class I and II MPE_RS20480 PF00392 Bacterial regulatory proteins, gntR family MPE_RS20490 PF02567 Phenazine biosynthesis-like protein MPE_RS20555 PF02874 ATP synthase alpha/beta family, beta-barrel domain MPE_RS20555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MPE_RS20565 PF02874 ATP synthase alpha/beta family, beta-barrel domain MPE_RS20565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MPE_RS20625 PF04453 LPS transport system D MPE_RS20630 PF04453 LPS transport system D MPE_RS20645 PF00639 PPIC-type PPIASE domain MPE_RS20645 PF09312 SurA N-terminal domain MPE_RS20695 PF00586 AIR synthase related protein, N-terminal domain MPE_RS20695 PF02769 AIR synthase related protein, C-terminal domain MPE_RS20830 PF01544 CorA-like Mg2+ transporter protein MPE_RS21300 PF00391 PEP-utilising enzyme, mobile domain MPE_RS21300 PF02887 Pyruvate kinase, alpha/beta domain MPE_RS21300 PF00224 Pyruvate kinase, barrel domain MPE_RS21595 PF13193 AMP-binding enzyme C-terminal domain MPE_RS21595 PF00501 AMP-binding enzyme MPE_RS21860 PF00501 AMP-binding enzyme MPE_RS21860 PF16177 Acetyl-coenzyme A synthetase N-terminus MPE_RS21860 PF13193 AMP-binding enzyme C-terminal domain MPE_RS21960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MPE_RS21960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPE_RS21960 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS21965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MPE_RS21965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MPE_RS21965 PF00378 Enoyl-CoA hydratase/isomerase MPE_RS22060 PF05140 ResB-like family MPE_RS22265 PF13360 PQQ-like domain MPE_RS22265 PF01011 PQQ enzyme repeat MPE_RS22305 PF00106 short chain dehydrogenase MPE_RS22570 PF08345 Flagellar M-ring protein C-terminal MPE_RS22570 PF01514 Secretory protein of YscJ/FliF family MPE_RS22610 PF04170 NlpE N-terminal domain MPE_RS22610 PF17185 NlpE C-terminal OB domain MPE_RS22620 PF00535 Glycosyl transferase family 2 MPE_RS22630 PF00563 EAL domain MPE_RS22630 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS22630 PF03707 Bacterial signalling protein N terminal repeat MPE_RS22645 PF00535 Glycosyl transferase family 2 MPE_RS22655 PF08446 PAS fold MPE_RS22655 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS22655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS22655 PF01590 GAF domain MPE_RS22655 PF00360 Phytochrome region MPE_RS22715 PF08308 PEGA domain MPE_RS22715 PF00069 Protein kinase domain MPE_RS22735 PF05840 Bacteriophage replication gene A protein (GPA) MPE_RS22760 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS22760 PF03707 Bacterial signalling protein N terminal repeat MPE_RS22760 PF00563 EAL domain MPE_RS22770 PF01555 DNA methylase MPE_RS22775 PF17874 MalT-like TPR region MPE_RS22775 PF00196 Bacterial regulatory proteins, luxR family MPE_RS22780 PF00563 EAL domain MPE_RS22780 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS22780 PF03707 Bacterial signalling protein N terminal repeat MPE_RS22780 PF13188 PAS domain MPE_RS22785 PF00989 PAS fold MPE_RS22785 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS22785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS22795 PF02311 AraC-like ligand binding domain MPE_RS22795 PF12833 Helix-turn-helix domain MPE_RS22805 PF00535 Glycosyl transferase family 2 MPE_RS22815 PF08446 PAS fold MPE_RS22815 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS22815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS22815 PF01590 GAF domain MPE_RS22815 PF00360 Phytochrome region MPE_RS22820 PF12282 Signal transduction histidine kinase MPE_RS22820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS22820 PF07568 Histidine kinase MPE_RS22830 PF00069 Protein kinase domain MPE_RS22830 PF03793 PASTA domain MPE_RS22870 PF00563 EAL domain MPE_RS22870 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS22870 PF03707 Bacterial signalling protein N terminal repeat MPE_RS22870 PF13188 PAS domain MPE_RS22875 PF03330 Lytic transglycolase MPE_RS22875 PF05036 Sporulation related domain MPE_RS22885 PF01258 Prokaryotic dksA/traR C4-type zinc finger MPE_RS22890 PF01590 GAF domain MPE_RS22890 PF00563 EAL domain MPE_RS22890 PF00990 Diguanylate cyclase, GGDEF domain MPE_RS22890 PF00360 Phytochrome region MPE_RS22905 PF01627 Hpt domain MPE_RS22905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MPE_RS22905 PF00672 HAMP domain MPE_RS22905 PF17149 Periplasmic sensor domain found in signal transduction proteins MPE_RS22905 PF00512 His Kinase A (phospho-acceptor) domain MPE_RS22905 PF00072 Response regulator receiver domain