locus strain_id interpro function go others METD_RS00005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PF11638|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 METD_RS00010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 METD_RS00015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001238|IPR003395|IPR003593|IPR018078|IPR027417 AAA+ ATPase domain|DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF02463|PS00617|PS00618|PTHR32182|SM00382|SSF52540|TIGR00611 METD_RS00020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN domain-like|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|SSF88723 METD_RS00025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011660 Rv0623-like transcription factor PF07704 METD_RS00030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF16124|PTHR13710|PTHR13710:SF81|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389 METD_RS00045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003583|IPR003593|IPR006344|IPR006345|IPR010994|IPR027417|IPR027785|IPR029493 AAA+ ATPase domain|DNA helicase, RecD-like|Helix-hairpin-helix DNA-binding motif, class 1|P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecD|RecD helicase-like helix-hairpin-helix domain|RuvA domain 2-like|UvrD-like helicase C-terminal domain GO:0003677|GO:0004386|GO:0006281|GO:0006302|GO:0006310|GO:0008854|GO:0009338|GO:0032508|GO:0043141 G3DSA:1.10.150.20|G3DSA:3.40.50.300|MF_01487|MF_01488|PF13538|PF13604|PF14490|PF14520|PTHR10887|PTHR10887:SF284|SM00278|SM00382|SSF47781|SSF52540|TIGR01448 METD_RS00055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010074|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine subunit PurL|PurM-like, N-terminal domain GO:0004642|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00420|PF00586|PF02769|PIRSF001587|PTHR10099|PTHR10099:SF2|SSF55326|SSF56042|TIGR01736 METD_RS00060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002634 BolA protein G3DSA:3.30.300.90|PF01722|PIRSF003113|PTHR12735|PTHR12735:SF3|SSF82657 METD_RS00065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002109|IPR004480|IPR012336|IPR014434 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|PTHR10293|SSF52833|TIGR00365 METD_RS00070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PTHR22912|PTHR22912:SF159|SSF51905 METD_RS00075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|PTHR10907|PTHR10907:SF47|SSF63829 METD_RS00090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 METD_RS00095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR014774|IPR027417|IPR030665 AAA+ ATPase domain|Circadian clock protein kinase KaiC|KaiC-like domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF06745|PIRSF039117|PR01874|PTHR22942|PTHR22942:SF38|SM00382|SSF52540 METD_RS00100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011009|IPR018721 Protein kinase-like domain|Protein of unknown function DUF2252 G3DSA:3.90.1200.10|PF10009|SSF56112 METD_RS00105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF320|SM00822|SSF51735 METD_RS00110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF356|SM00345|SM00895|SSF46785|SSF48008 METD_RS00120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004165|IPR005777 Acetyl-S-ACP:malonate ACP transferase|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF16957|PTHR13707|PTHR13707:SF27|SSF100950|TIGR01110 METD_RS00125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009662|IPR023439 Malonate decarboxylase delta subunit|Malonate decarboxylase/citrate lyase acyl carrier protein MF_00710|PD015450|PF06857|TIGR03130 METD_RS00130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000022|IPR017556|IPR029045 Biotin-independent malonate decarboxylase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0016831|GO:0044262 G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF21|SSF52096|TIGR03133 METD_RS00135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009648|IPR011763|IPR029045 Acetyl-coenzyme A carboxyltransferase, C-terminal|Biotin-dependent malonate decarboxylase, gamma subunit|ClpP/crotonase-like domain GO:0016874|GO:0044262 G3DSA:3.90.226.10|PF06833|SSF52096|TIGR03134 METD_RS00140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 PF10620|TIGR03135 METD_RS00145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002736|IPR017555 Triphosphoribosyl-dephospho-CoA protein|Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MF_01883|PF01874|PTHR30201|TIGR03132 METD_RS00150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001227|IPR014043|IPR016035|IPR016036|IPR020801 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PTHR10982|PTHR10982:SF16|SM00827|SSF52151|SSF55048 METD_RS00155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001775|IPR004846|IPR005644|IPR013356 GspD/PilQ family|NolW-like|Type II secretion system GspD|Type II/III secretion system GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867 PF00263|PF03958|PR00811|PTHR30332|PTHR30332:SF0|TIGR02517 METD_RS00160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 G3DSA:1.10.40.60|PF03934|SSF158544 METD_RS00165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13633|PS00409|TIGR02532 METD_RS00170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13633|TIGR02532 METD_RS00175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF54523 METD_RS00180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584 Integrase, catalytic core GO:0015074 PF13683 METD_RS00205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS00210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS00215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014710|IPR015392 Domain of unknown function DUF1971|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF09313|SSF51197 METD_RS00225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS00240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF28|SM00100|SSF46785|SSF51206 METD_RS00245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF22|SM00100|SSF46785|SSF51206 METD_RS00265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PTHR30349|PTHR30349:SF5|SSF56349 METD_RS00275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|PTHR10314|PTHR10314:SF3|SSF53686|TIGR00263 METD_RS00280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|PTHR22854|PTHR22854:SF6|SSF51366 METD_RS00285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 METD_RS00290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000119|IPR005685|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|PTHR33175|PTHR33175:SF5|SM00411|SSF47729|TIGR00988 METD_RS00295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002142|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR33209|SSF52096|TIGR00706 METD_RS00300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063|IPR030807 Putative sugar O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase SSF53335|TIGR04371 METD_RS00305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249|TIGR00717 METD_RS00310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001537|IPR004441|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|PTHR12029|PTHR12029:SF58|SM00967|SSF55315|SSF75217|TIGR00186 METD_RS00325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|PTHR13903|PTHR13903:SF4|SSF51182 METD_RS00330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003148|IPR004771|IPR006153|IPR016040 Cation/H+ exchanger|K+/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|PTHR16254|PTHR16254:SF22|SSF51735|TIGR00932 METD_RS00335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683|PTHR31272|PTHR31272:SF4 METD_RS00340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003265|IPR011257|IPR023170 DNA glycosylase|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PTHR10242|PTHR10242:SF0|SM00478|SSF48150 METD_RS00355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR024478 4HB MCP domain|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PTHR32089|PTHR32089:SF40|SM00283|SSF158472|SSF58104 METD_RS00360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF51|SM00382|SSF52540 METD_RS00365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007351 Uncharacterised protein YjbR PF04237|SSF142906 METD_RS00390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|PTHR12526|SSF53756 METD_RS00395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 METD_RS00400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR006379|IPR006380|IPR023214|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Sucrose-phosphatase, N-terminal G3DSA:3.40.50.1000|G3DSA:3.40.50.2000|G3DSA:3.90.1070.10|PF00534|PF05116|PF13439|PTHR12526|PTHR12526:SF386|SSF53756|SSF56784|TIGR01484 METD_RS00405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027791|IPR029044 Galactosyltransferase, C-terminal|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF02709|PTHR22916|SSF53448 METD_RS00410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 G3DSA:3.40.50.2000|PF04101|SSF53756 METD_RS00415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019290|IPR029044 Glycosyltransferase 2-like, prokaryotic type|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF10111|PTHR22916|SSF53448 METD_RS00420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13439|PF13692|PTHR12526|SSF53756 METD_RS00425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13578|PTHR37909|PTHR37909:SF1|SSF53335 METD_RS00430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|PTHR26402:SF483|SM00448|SM00471|SSF109604|SSF52172 METD_RS00435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PS00211|PTHR32282|PTHR32282:SF4|SM00382|SSF52540 METD_RS00440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PTHR11019|PTHR11019:SF58|SM00342|SSF46689|SSF52317 METD_RS00445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PIRSF000126|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 METD_RS00450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 METD_RS00455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|PTHR11908|PTHR11908:SF2|SM01008|SSF54665|SSF56003 METD_RS00460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 PF03595|PTHR37955|PTHR37955:SF1 METD_RS00465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006139|IPR006140|IPR016040|IPR029015|IPR029752|IPR029753 D-3-phosphoglycerate dehydrogenase, type2|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|PTHR10996|PTHR10996:SF18|SSF51735|SSF52283|SSF55021 METD_RS00470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF76|SSF55103|SSF56176 METD_RS00475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011031 Multihaem cytochrome G3DSA:3.90.10.10|PF14522|PTHR39425|PTHR39425:SF1|SSF48695 METD_RS00480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009010|IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain G3DSA:2.40.40.20|G3DSA:3.30.70.20|G3DSA:3.40.50.740|PF12838|PTHR11938|PTHR11938:SF86|SSF50692|SSF53706|SSF54862 METD_RS00485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005614 NrfD family PF03916|PTHR34856|PTHR34856:SF1 METD_RS00490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021776 Protein of unknown function DUF3341 PF11821|PTHR40394|PTHR40394:SF1 METD_RS00495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR40394|PTHR40394:SF2|SSF46626 METD_RS00510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001505|IPR002429|IPR008168|IPR008972|IPR009056|IPR011759|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II|Cytochrome c, class IC|Cytochrome c-like domain GO:0004129|GO:0005506|GO:0005507|GO:0009055|GO:0016020|GO:0016021|GO:0016491|GO:0020037|GO:0022900 G3DSA:1.10.287.90|G3DSA:1.10.760.10|G3DSA:2.60.40.420|PF00116|PF13442|PR00605|PS00078|PTHR22888|PTHR22888:SF2|SSF46626|SSF49503|SSF81464|TIGR02866 METD_RS00515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000883|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0022900|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF6|SSF81442|TIGR02891 METD_RS00520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000298|IPR013833|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF6|SSF81452 METD_RS00525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005171|IPR011743 Caa(3)-type oxidase, subunit IV|Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 PF03626|TIGR02229 METD_RS00535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF6|SSF88659|SSF88946|TIGR02937 METD_RS00545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011614|IPR018028|IPR020835|IPR024168 Catalase core domain|Catalase, SrpA-type, predicted|Catalase, mono-functional, haem-containing|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PIRSF000296|PTHR11465|PTHR11465:SF16|SM01060|SSF56634 METD_RS00550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|PTHR30529|PTHR30529:SF1|SSF81342 METD_RS00555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 PF09604|TIGR02115 METD_RS00560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MF_00275|PF03814|PIRSF001294|PTHR30607|TIGR00680 METD_RS00570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR006391|IPR008250|IPR018303|IPR023214|IPR023299 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, B chain, subfamily IA|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0005524|GO:0006813|GO:0008556|GO:0016021|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|MF_00285|PF00122|PF00702|PR00119|PS00154|PS01229|PTHR24093|PTHR24093:SF49|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01497 METD_RS00575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MF_00276|PF02669|PIRSF001296|PTHR30042|PTHR30042:SF2|TIGR00681 METD_RS00580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003018|IPR003594|IPR003661|IPR003852|IPR004358|IPR006016|IPR014729|IPR025201|IPR027417|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Rossmann-like alpha/beta/alpha sandwich fold|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal|Signal transduction histidine kinase-related protein, C-terminal|UspA GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0006950|GO:0007165|GO:0016020|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.620|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.300|G3DSA:3.40.50.620|PF00512|PF00582|PF02518|PF02702|PF13492|PF13493|PR00344|PTHR24423|PTHR24423:SF562|SM00387|SM00388|SSF47384|SSF52402|SSF55781|SSF55874 METD_RS00585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF399|SM00448|SM00862|SSF52172 METD_RS00595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 METD_RS00600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain GO:0005975 G3DSA:3.20.20.80|SSF51445 METD_RS00605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027554|IPR027555|IPR029063 Methyltransferase, Rta_06860 family|S-adenosyl-L-methionine-dependent methyltransferase|tRNA (mo5U34)-methyltransferase-like G3DSA:3.40.50.150|PF08003|PTHR10108|SSF53335|TIGR04290 METD_RS00610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|SM00855|SSF53254 METD_RS00615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002587|IPR013021|IPR016040 Myo-inositol-1-phosphate synthase|Myo-inositol-1-phosphate synthase, GAPDH-like|NAD(P)-binding domain GO:0004512|GO:0006021|GO:0008654 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01658|PIRSF015578|PTHR11510|PTHR11510:SF9|SSF51735|SSF55347 METD_RS00620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF424|SSF51735 METD_RS00625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029056 Ribokinase-like G3DSA:3.40.1190.20|PF13524|SSF53756 METD_RS00630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13524|SSF53756 METD_RS00635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13524|SSF53756 METD_RS00640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|PTHR12526:SF374|SSF53756 METD_RS00645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970|IPR027559 B12-binding domain/radical SAM domain protein, rhizo-twelve system|Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|TIGR04295 METD_RS00650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF423|SSF51735 METD_RS00655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF466|SSF51735 METD_RS00665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS00670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS00675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS00685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006197|IPR015927|IPR019759|IPR028360 Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677|GO:0006355 G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|SSF51306 METD_RS00705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|PTHR13779|PTHR13779:SF7|SM00382|SSF48019|SSF52540 METD_RS00710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 PF02074|PIRSF006615|PR00998|PTHR34217|PTHR34217:SF1|SSF55486 METD_RS00715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013126|IPR018181 Heat shock protein 70 family|Heat shock protein 70, conserved site G3DSA:3.30.420.40|PF00012|PR00301|PS01036|PTHR19375|PTHR19375:SF182|SSF53067 METD_RS00720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PS01129|PTHR11079|PTHR11079:SF60|SSF55120|SSF55174|TIGR00005 METD_RS00725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF40|SSF56784|TIGR01549 METD_RS00730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011419|IPR023335 ATP12, ATPase F1F0-assembly protein|Orthogonal Bundle domain in ATP12 GO:0043461 G3DSA:1.10.3580.10|G3DSA:3.30.2180.10|PF07542|PTHR21013|PTHR21013:SF11|SSF160909 METD_RS00735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000022|IPR029045 Carboxyl transferase|ClpP/crotonase-like domain G3DSA:3.90.226.10|PF01039|PTHR22855|PTHR22855:SF14|SSF52096 METD_RS00740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|TerB-like PF05099|SSF158682 METD_RS00750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF14246|PTHR30055|PTHR30055:SF76|SSF46689 METD_RS00755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 METD_RS00760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR30212|PTHR30212:SF3|SSF50475 METD_RS00765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13578|SSF53335 METD_RS00770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR010085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Crotonyl-CoA reductase|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0043880|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF294|SM00829|SSF50129|SSF51735|TIGR01751 METD_RS00775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711 Catalase active site|Catalase core domain|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00438|PTHR11465|SM01060|SSF56634 METD_RS00780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006098|IPR006099|IPR006158|IPR006159|IPR014348|IPR016176 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, C-terminal|Methylmalonyl-CoA mutase, alpha chain, catalytic|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0004494|GO:0008152|GO:0016853|GO:0016866|GO:0031419|GO:0046872 G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PF02310|PTHR23408|PTHR23408:SF15|SSF51703|SSF52242|TIGR00640|TIGR00641 METD_RS00785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019619 Protein of unknown function DUF2490 PF10677 METD_RS00790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF608|SSF51735 METD_RS00795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PTHR33154|PTHR33154:SF2|SM00418|SSF46785 METD_RS00800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001412|IPR002305|IPR002306|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PS00178|PTHR10055|PTHR10055:SF10|SSF52374|TIGR00233 METD_RS00805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000573|IPR004431|IPR015928|IPR015937 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF12|SSF52016|TIGR00171 METD_RS00810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000816|IPR016125 Peptidase C15, pyroglutamyl peptidase I|Peptidase C15, pyroglutamyl peptidase I-like GO:0005829|GO:0006508|GO:0016920 G3DSA:3.40.630.20|PF01470|PR00706|PTHR23402|SSF53182 METD_RS00815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005129|IPR027417 P-loop containing nucleoside triphosphate hydrolase|SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 G3DSA:1.20.5.170|G3DSA:3.40.50.300|PF03308|PTHR23408|PTHR23408:SF17|SSF52540|TIGR00750 METD_RS00820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010297|IPR014586|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF900, hydrolase-like|Uncharacterised conserved protein UCP033909 G3DSA:3.40.50.1820|PF05990|PIRSF033909|SSF53474 METD_RS00830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001375|IPR015943|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006508|GO:0008236 G3DSA:2.130.10.10|G3DSA:3.40.50.1820|PF00326|PTHR11731|PTHR11731:SF140|SSF53474|SSF82171 METD_RS00835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS00845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004593|IPR004843|IPR026843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Nuclease SbcCD subunit D|Nuclease SbcCD subunit D, C-terminal domain GO:0004519|GO:0006259|GO:0008408|GO:0016787 G3DSA:3.60.21.10|PF00149|PF12320|PTHR30337|PTHR30337:SF0|SSF56300|TIGR00619 METD_RS00850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027050|IPR027417 Nuclease SbcCD subunit C|P-loop containing nucleoside triphosphate hydrolase GO:0004518|GO:0006281 G3DSA:3.40.50.300|PF13476|PF13558|PTHR32114|PTHR32114:SF2|SSF52540 METD_RS00855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23515|PTHR23515:SF4|SSF103473 METD_RS00860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029057 Phosphoribosyltransferase-like G3DSA:3.40.50.2020|PTHR11907|PTHR11907:SF9|SSF53271 METD_RS00870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR13090|SSF53335 METD_RS00875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007361 Domain of unknown function DUF427 PF04248|PTHR34310|PTHR34310:SF3 METD_RS00885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|PTHR22769:SF35|SSF55811 METD_RS00890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007497 Protein of unknown function DUF541 PF04402|PTHR34387|PTHR34387:SF1 METD_RS00895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266|TIGR00120 METD_RS00900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 METD_RS00905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000889|IPR012336|IPR029759 Glutathione peroxidase|Glutathione peroxidase active site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00460|PTHR11592|PTHR11592:SF40|SSF52833 METD_RS00920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018691 Protein of unknown function DUF2188 PF09954 METD_RS00925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002872|IPR005933|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR025703|IPR029041 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Bifunctional protein PutA|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|FAD-linked oxidoreductase-like|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Proline dehydrogenase domain GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0006561|GO:0008152|GO:0010133|GO:0016491|GO:0016620|GO:0055114 G3DSA:1.10.2060.10|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PF14850|PIRSF000197|PS00070|PTHR11699|PTHR11699:SF18|SSF51730|SSF53720|SSF81935|TIGR01238 METD_RS00930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007844|IPR032712 AsmA|AsmA-like, C-terminal PF05170|PF13502 METD_RS00940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000212|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 METD_RS00945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|SSF52540 METD_RS00950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|PTHR19139|PTHR19139:SF103|SSF81338|TIGR00861 METD_RS00955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF00929|PTHR30231|PTHR30231:SF10|SM00479|SSF53098 METD_RS00960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005190|IPR013546|IPR023057 Glutamate-ammonia ligase adenylyltransferase, repeated domain|Glutamate-ammonia-ligase adenylyltransferase|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|MF_00802|PF03710|PF08335|PTHR30621|SSF81301|SSF81593 METD_RS00965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018679 Putative PD-(D/E)XK phosphodiesterase (DUF2161) PF09929 METD_RS00975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 METD_RS00980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF578|SM00448|SM00862|SSF52172 METD_RS00985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|PTHR35368|PTHR35368:SF1|SSF82784 METD_RS00990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS00995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF8|SSF161098 METD_RS01000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 PF01810|PIRSF006324|PTHR30086|PTHR30086:SF7 METD_RS01005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010067|IPR015168 Aliphatic sulfonates-binding protein|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF1|SSF53850|TIGR01728 METD_RS01010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01909|PF01966|PF08335|PIRSF006288|PTHR13734|PTHR13734:SF45|SM00471|SSF55021|SSF81301|SSF81593|SSF81891|TIGR01693 METD_RS01015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 METD_RS01020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025528 BrnA antitoxin of type II toxin-antitoxin system PF14384 METD_RS01025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PF04365 METD_RS01030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001086|IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PIRSF001500|PTHR21022|SSF53850|SSF55021 METD_RS01035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466 METD_RS01040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|PTHR11961|PTHR11961:SF6|SSF46626 METD_RS01045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF2|SSF53850 METD_RS01050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF2|SSF53850 METD_RS01055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF66|SSF161098 METD_RS01060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|PTHR23091|PTHR23091:SF237|SSF55729 METD_RS01065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 METD_RS01070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF99|SSF53448 METD_RS01095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR027065|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0004252|GO:0005524|GO:0030163 G3DSA:3.40.50.300|PF00004|PTHR10046|PTHR10046:SF50|SM00382|SSF52540 METD_RS01130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 METD_RS01135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 METD_RS01155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF438|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 METD_RS01165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003018|IPR003594|IPR011495|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF07568|PF13185|PTHR24423|PTHR24423:SF472|SM00065|SM00387|SSF55781|SSF55874 METD_RS01170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029052 Metallo-dependent phosphatase-like G3DSA:3.60.21.10|SSF56300 METD_RS01175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|Nucleotide cyclase G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF02743|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS01180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 METD_RS01185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF10|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS01190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF7|SSF111369|TIGR01730 METD_RS01195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|SSF49764 METD_RS01200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR012318|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF13545|PTHR24567|PTHR24567:SF28|SSF46785|SSF51206 METD_RS01205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS01215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 METD_RS01220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005530 SPW repeat PF03779 METD_RS01225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR011053 Biotin/lipoyl attachment|Single hybrid motif G3DSA:2.40.50.100|PF00364|SSF51230 METD_RS01230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 METD_RS01245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 PF01566|PTHR11706|PTHR11706:SF43 METD_RS01250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 METD_RS01255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF2|SM00749 METD_RS01260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS01265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS01270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR37823|SSF46626 METD_RS01275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS01285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|PTHR30529|SSF81342 METD_RS01290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008217 Ccc1 family PF01988|PTHR31851 METD_RS01295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR002328|IPR011032|IPR013154|IPR014187|IPR016040 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-binding type 2|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PS00059|PTHR11695|PTHR11695:SF403|SSF50129|SSF51735|TIGR02822 METD_RS01300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF2|SM00749 METD_RS01310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 METD_RS01315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 METD_RS01320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493 METD_RS01325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010941|IPR022211|IPR029058 Alpha/Beta hydrolase fold|Poly-beta-hydroxybutyrate polymerase N-terminal|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 G3DSA:3.40.50.1820|PF07167|PF12551|PTHR36837|PTHR36837:SF2|SSF53474 METD_RS01330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24322|PTHR24322:SF317|SSF51735 METD_RS01335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002505|IPR002539|IPR003965|IPR029069 Fatty acid synthase|HotDog domain|MaoC-like domain|Phosphate acetyl/butaryl transferase GO:0004312|GO:0005835|GO:0006633|GO:0008152|GO:0016746|GO:0055114 G3DSA:3.10.129.10|G3DSA:3.40.50.10750|PF01515|PF01575|PR01483|PTHR13078|SSF53659|SSF54637 METD_RS01340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 METD_RS01345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 METD_RS01355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF2|SM00749 METD_RS01360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009945 Protein of unknown function DUF1476 PF07345|PIRSF031780 METD_RS01370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 METD_RS01375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS01390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS01415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002559|IPR025161 Putative transposase IS4/IS5 family|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13340|PTHR30007|PTHR30007:SF0 METD_RS01420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR24559|SSF53098 METD_RS01425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008490|IPR025668 Transposase DDE domain|Transposase InsH, N-terminal PF05598|PF13751|PTHR33408|PTHR33408:SF2 METD_RS01430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF613|SM00448|SSF52172 METD_RS01435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF613|SM00421|SM00448|SSF46894|SSF52172 METD_RS01440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF505|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS01445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS01450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR37823|SSF46626 METD_RS01455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS01460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PS00154|PTHR24093|PTHR24093:SF50|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 METD_RS01465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR24559|SSF53098 METD_RS01470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001633|IPR013656|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold-4 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08448|PTHR10799|PTHR10799:SF774|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 METD_RS01475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002048|IPR011992|IPR018247 EF-Hand 1, calcium-binding site|EF-hand domain|EF-hand domain pair GO:0005509 G3DSA:1.10.238.10|PF13202|PF13833|PS00018|SM00054|SSF47473 METD_RS01480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 METD_RS01485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS01495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005194|IPR005195|IPR005196|IPR008928|IPR011013|IPR012341|IPR017045 Galactose mutarotase-like domain|Glycoside hydrolase family 65, C-terminal|Glycoside hydrolase, family 65, N-terminal|Glycoside hydrolase, family 65, central catalytic|Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.50.10.10|G3DSA:2.60.420.10|G3DSA:2.70.98.40|PF03632|PF03633|PF03636|PIRSF036289|PTHR11051|SSF48208|SSF74650 METD_RS01500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF00702|PTHR18901|SSF56784|TIGR01509 METD_RS01505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|PTHR33154:SF10|SM00418|SSF46785 METD_RS01510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012909 PHA accumulation regulator DNA-binding, N-terminal PF07879 METD_RS01515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 METD_RS01520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF279|SM00448|SM00862|SSF46894|SSF52172 METD_RS01530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|PTHR13887|PTHR13887:SF25|SSF52833 METD_RS01535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS01540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|PTHR37691|PTHR37691:SF1|SSF75169 METD_RS01545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 METD_RS01550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30574|PTHR30574:SF1 METD_RS01555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30574|PTHR30574:SF1 METD_RS01560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781|IPR019931 LPXTG cell wall anchor domain|Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF9|TIGR01167 METD_RS01565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF110|SM00849|SSF56281 METD_RS01570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|PTHR10438|PTHR10438:SF281|SSF52833 METD_RS01575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF110|SM00849|SSF56281 METD_RS01580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 METD_RS01590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR012693|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, phosphonate import, PhnC|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015416|GO:0015716|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF408|SM00382|SSF52540|TIGR02315 METD_RS01595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 G3DSA:3.40.190.10|PF12974|PTHR30024|PTHR30024:SF17|SSF53850|TIGR01098 METD_RS01600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR005769 ABC transporter type 1, transmembrane domain MetI-like|ABC transporter, permease PhnE/PtxC GO:0005887|GO:0006810|GO:0015604|GO:0015716|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30043|PTHR30043:SF1|SSF161098|TIGR01097 METD_RS01605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PTHR10996|SSF51735|SSF52283 METD_RS01610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF11|SSF46785|SSF53850 METD_RS01615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|SSF55073|TIGR00254 METD_RS01620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR33751|PTHR33751:SF3|SSF46626 METD_RS01625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PTHR10422|PTHR10422:SF17|SSF81442 METD_RS01630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001505|IPR002429|IPR008972 Copper centre Cu(A)|Cupredoxin|Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 G3DSA:2.60.40.420|PF00116|PS00078|PTHR22888|PTHR22888:SF12|SSF49503 METD_RS01635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR014353 Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PIRSF000018|PTHR35008|PTHR35008:SF5|SSF46626 METD_RS01640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000005|PTHR33751|PTHR33751:SF2|SSF46626 METD_RS01645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF32|SM00100|SM00419|SSF46785|SSF51206 METD_RS01665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF438|SM00448|SSF52172 METD_RS01675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60 METD_RS01680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR33336|SSF54909 METD_RS01685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|PTHR24322:SF366|SM00822|SSF51735 METD_RS01690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|PTHR11732:SF215|SSF51430 METD_RS01695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF1|SSF46785|SSF53850 METD_RS01710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 G3DSA:3.60.130.10|PF02668|SSF51197 METD_RS01715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001902|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 PF00916|PTHR11814|PTHR11814:SF112 METD_RS01720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|SSF52768 METD_RS01730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015330 DNA primase/polymerase, bifunctional, N-terminal PF09250|SSF56747 METD_RS01755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642|IPR003959|IPR003960|IPR027417 ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41 GO:0004222|GO:0005524|GO:0006508 G3DSA:3.40.50.300|PF00004|PF01434|PS00674|PTHR23077|SSF140990|SSF52540 METD_RS01770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 METD_RS01775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR013249|IPR013324 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 3/4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|PF08281|SSF88659 METD_RS01785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000212|IPR010359|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|HTH domain, IrrE-type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF06114|PF13361|PTHR11070|SSF52540 METD_RS01790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025701|IPR027802 Multi-ubiquitin domain|Ubiquitin-conjugating enzyme, E2, family E PF14452|PF14462 METD_RS01795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000594|IPR016040|IPR028090 JAB domain, prokaryotic|NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.140.10|G3DSA:3.40.50.720|PF00899|PF14464|PTHR10953|SSF102712|SSF69572 METD_RS01810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS01845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40 METD_RS01885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like G3DSA:3.60.21.10|PF12850|SSF56300 METD_RS01890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS01895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000792|IPR001610|IPR011991|IPR013656|IPR016032 PAC motif|PAS domain|PAS fold-4|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|PF08448|PF13426|PR00038|PTHR24423|SM00086|SM00091|SM00421|SSF46894|SSF55785|TIGR00229 METD_RS01900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 METD_RS01910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 METD_RS01915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 METD_RS01920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021134 Bestrophin/UPF0187 PF01062|PTHR33281|PTHR33281:SF3 METD_RS01925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001261|IPR002933|IPR010169|IPR011650 Acetylornithine deacetylase (ArgE)|ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain GO:0005737|GO:0006508|GO:0006526|GO:0008152|GO:0008237|GO:0008270|GO:0008777|GO:0016787|GO:0050897 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PS00759|PTHR11014|PTHR11014:SF80|SSF53187|SSF55031|TIGR01892 METD_RS01930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007474|IPR023065 ApaG domain|Uncharacterised protein family ApaG G3DSA:2.60.40.1470|MF_00791|PF04379|PTHR14289|SSF110069 METD_RS01940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010550|IPR029054 Deoxycytidine triphosphate deaminase, bacterial|dUTPase-like GO:0008829|GO:0009394 G3DSA:2.70.40.10|PF06559|PTHR11241|PTHR11241:SF1|SSF51283 METD_RS01945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000292|IPR023271 Aquaporin-like|Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PTHR30520|PTHR30520:SF2 METD_RS01950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PF00994|PTHR23293|PTHR23293:SF5|SM00852|SSF53218 METD_RS01955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005224 Sugar fermentation stimulation protein MF_00095|PF03749|PTHR30545|PTHR30545:SF2|TIGR00230 METD_RS01960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|PTHR34203|SSF53335|TIGR01444 METD_RS01965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|PTHR10992:SF771|SSF53474 METD_RS01975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30413|PTHR30413:SF5 METD_RS01980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF305|SM00382|SSF52540 METD_RS01985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF12838|PF13187|PS00198|PTHR24960|PTHR24960:SF43|SSF54862 METD_RS01990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 G3DSA:3.30.930.10|PF16917|SSF55681 METD_RS02005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021736 Protein of unknown function DUF3305 PF11749 METD_RS02010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021735 Protein of unknown function DUF3306 PF11748 METD_RS02015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR020945 DMSO/Nitrate reductase chaperone G3DSA:1.10.3480.10|PF02613|PTHR34227|PTHR34227:SF4|SSF89155 METD_RS02020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014177 Putative formate dehydrogenase, TAT signal-containing TIGR02811 METD_RS02025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006656|IPR006657|IPR006963|IPR009010|IPR027467 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PS00551|PTHR11615|PTHR11615:SF140|SM00926|SSF50692|SSF53706 METD_RS02030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|PTHR11938|PTHR11938:SF96|SSF54862 METD_RS02035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006471|IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane|Formate dehydrogenase, gamma subunit GO:0008863|GO:0009055|GO:0009326|GO:0016020|GO:0016021|GO:0022904|GO:0045333 G3DSA:1.20.950.20|PF01292|PTHR30074|PTHR30074:SF2|SSF81342|TIGR01583 METD_RS02050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019629 Uncharacterised protein family HI1736/YgjV PF10688 METD_RS02060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF13977|PR00455|PTHR30055|SSF46689|SSF48498 METD_RS02065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR010916|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain|TonB box, conserved site GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PS00430|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 METD_RS02070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF20|SSF82693|SSF82714|SSF82866 METD_RS02075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR12715|PTHR12715:SF17 METD_RS02080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002571|IPR011991|IPR021153|IPR029016 GAF domain-like|Heat-inducible transcription repressor HrcA|Heat-inducible transcription repressor HrcA, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|MF_00081|PF01628|PIRSF005485|PTHR34824|SSF46785|SSF55781|TIGR00331 METD_RS02090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|PTHR11953|PTHR11953:SF0|SSF54211|SSF55666|TIGR01966 METD_RS02095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF9|SSF52972|TIGR00042 METD_RS02100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|SM00729|SSF102114|TIGR00539 METD_RS02110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR33755|TIGR02385 METD_RS02115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF7|SSF53822 METD_RS02120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096 METD_RS02125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|PTHR34039|PTHR34039:SF1|SSF52980 METD_RS02130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 METD_RS02135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 G3DSA:3.40.190.10|G3DSA:3.40.190.120|PF04069|PTHR30177|PTHR30177:SF12|SSF53850 METD_RS02140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30177|PTHR30177:SF8|SSF161098 METD_RS02145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30177|PTHR30177:SF11|SSF161098 METD_RS02150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523|SSF47090 METD_RS02155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009683 Extensin-like, C-terminal PF06904 METD_RS02160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF47|SSF55486 METD_RS02165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524|GO:0009396 G3DSA:3.10.410.10|G3DSA:3.30.1510.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00721|PS00722|PTHR10025|SSF52540 METD_RS02170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006121|IPR017969 Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PS01047|SSF55008 METD_RS02175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SM00052|SSF141868 METD_RS02185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|PF04344|SSF75708 METD_RS02190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS02195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114|TIGR00083 METD_RS02200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006139|IPR006140|IPR016040|IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PTHR10996|PTHR10996:SF118|SSF51735|SSF52283 METD_RS02205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010466 Protein of unknown function DUF1058 PF06347 METD_RS02210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF3|SSF46785 METD_RS02215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010083|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0008693 G3DSA:3.10.129.10|MF_00405|PF07977|SSF54637|TIGR01749 METD_RS02220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|PTHR11712|SM00825|SSF53901 METD_RS02225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24322|PTHR24322:SF317|SSF51735 METD_RS02230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103 METD_RS02235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032808 DoxX family PF07681|PTHR33452|PTHR33452:SF4 METD_RS02250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001375|IPR002470|IPR023302|IPR029058 Alpha/Beta hydrolase fold|Peptidase S9, prolyl oligopeptidase, catalytic domain|Peptidase S9A, N-terminal domain|Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508|GO:0008236|GO:0070008 G3DSA:2.130.10.120|G3DSA:3.40.50.1820|PF00326|PF02897|PR00862|PTHR11757|PTHR11757:SF3|SSF50993|SSF53474 METD_RS02255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS02270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003808 Fe-S metabolism associated domain, SufE-like G3DSA:3.90.1010.10|PF02657|PTHR12735|PTHR12735:SF11|SSF82649 METD_RS02275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR011495|IPR013655 PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515 G3DSA:3.30.450.20|PF07568|PF08447|PTHR24423|PTHR24423:SF468|SM00086|SSF55785|TIGR00229 METD_RS02280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01590|PF02518|PF08447|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00065|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 METD_RS02285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014 PAS domain G3DSA:3.30.450.20|SSF55785 METD_RS02290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PTHR10374|PTHR10374:SF8|SSF54593 METD_RS02300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001930|IPR012779|IPR014782|IPR024601 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase|Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0006508|GO:0008237|GO:0008270 G3DSA:1.10.390.10|G3DSA:1.25.50.10|PF01433|PF11940|PR00756|PTHR11533|PTHR11533:SF152|SSF55486|SSF63737|TIGR02414 METD_RS02305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PF12860|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS02310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006035|IPR014033|IPR020855|IPR023696 Arginase|Ureohydrolase|Ureohydrolase domain|Ureohydrolase, manganese-binding site GO:0004053|GO:0006525|GO:0016813|GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PR00116|PS01053|PTHR11358|PTHR11358:SF2|SSF52768|TIGR01229 METD_RS02315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 METD_RS02320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 METD_RS02325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004323|IPR011322 Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta GO:0010038 G3DSA:3.30.70.830|PF03091|PTHR23419|SSF54913 METD_RS02330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|PTHR20275:SF7|SSF111331 METD_RS02335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012875 Protein of unknown function DUF1674 PF07896 METD_RS02340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001678|IPR006027|IPR018314|IPR023267|IPR029063 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type GO:0003723|GO:0006355|GO:0008168 G3DSA:1.10.940.10|G3DSA:3.40.50.150|PF01029|PF01189|PR02008|PS01153|PTHR22807|PTHR22807:SF30|SSF48013|SSF53335 METD_RS02350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR13693|SSF53383 METD_RS02360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SM00827|SSF52151|SSF55048|TIGR00128 METD_RS02365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF635|SM00822|SSF51735|TIGR01830 METD_RS02370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003231|IPR006162|IPR009081|IPR020806 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0006633|GO:0031177 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|PTHR20863|SM00823|SSF47336|TIGR00517 METD_RS02375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|PTHR11712:SF273|SM00825|SSF53901|TIGR03150 METD_RS02380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 METD_RS02385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF00702|PR00413|PTHR18901|SSF56784|TIGR01509 METD_RS02390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005194|IPR005195|IPR005196|IPR008928|IPR011013|IPR012341|IPR017045 Galactose mutarotase-like domain|Glycoside hydrolase family 65, C-terminal|Glycoside hydrolase, family 65, N-terminal|Glycoside hydrolase, family 65, central catalytic|Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:1.50.10.10|G3DSA:2.60.420.10|G3DSA:2.70.98.40|PF03632|PF03633|PF03636|PIRSF036289|PTHR11051|PTHR11051:SF8|SSF48208|SSF74650 METD_RS02395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 METD_RS02400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|PTHR30438|PTHR30438:SF1|SSF111369 METD_RS02405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12698|PS00211|PTHR24220|PTHR24220:SF388|SM00382|SSF52540 METD_RS02410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF12698|PTHR30294|PTHR30294:SF22 METD_RS02415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 METD_RS02420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF186|SSF51905 METD_RS02430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF282|SM00382|SSF50331|SSF52540 METD_RS02435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026045 Ferric binding protein G3DSA:3.40.190.10|PF13343|PIRSF002825|PTHR30006|PTHR30006:SF4|SSF53850 METD_RS02440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|PTHR30183:SF2|SSF161098 METD_RS02450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF07264 METD_RS02455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006652|IPR015915 Kelch repeat type 1|Kelch-type beta propeller GO:0005515 G3DSA:2.120.10.80|PF01344|PF13415|PF13964|PTHR24412|SM00612|SSF117281 METD_RS02460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|SSF51905 METD_RS02465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR014710|IPR018490|IPR019629|IPR020137 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Uncharacterised protein family HI1736|Uncharacterised protein family HI1736/YgjV G3DSA:2.60.120.10|PD058023|PF00027|PF10688|SM00100|SSF51206 METD_RS02470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 METD_RS02485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005669|IPR010916 Thiosulphate/Sulfate-binding protein|TonB box, conserved site GO:0008272|GO:0015419 G3DSA:3.40.190.10|PF13531|PS00430|PTHR30368|PTHR30368:SF2|SSF53850|TIGR00971 METD_RS02490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF6|SSF161098|TIGR00969|TIGR02139 METD_RS02495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR005667|IPR011866 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF1|SSF161098|TIGR00969|TIGR02140 METD_RS02500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005666|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1 GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0042626 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF123|SM00382|SSF52540|TIGR00968 METD_RS02535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016990|IPR019253 Protein of unknown function DUF2244, transmembrane|Uncharacterised conserved protein UCP032162, transmembrane PF10003|PIRSF032162 METD_RS02540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003265|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III-like, conserved site-2|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00730|PIRSF001435|PS01155|PTHR10359|PTHR10359:SF18|SM00478|SSF48150|TIGR01083 METD_RS02545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PTHR11609|PTHR11609:SF2|SSF56104|TIGR00081 METD_RS02550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 METD_RS02555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 METD_RS02565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010642 Invasion protein B PF06776 METD_RS02575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002725 Protein of unknown function DUF45 PF01863|PTHR30399|PTHR30399:SF3 METD_RS02580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 METD_RS02585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 METD_RS02590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|PTHR26402|PTHR26402:SF344|SM00448|SSF52172 METD_RS02600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS G3DSA:3.30.1280.10|MF_01926|PD010362|PF02700|PTHR34696|SSF82697|TIGR00302 METD_RS02605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010075|IPR029062 Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 G3DSA:3.40.50.880|MF_00421|PF13507|PIRSF001586|PTHR10099|SM01211|SSF52317|TIGR01737 METD_RS02610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR32315|SSF53271|TIGR01090 METD_RS02615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655 METD_RS02620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|SSF51391 METD_RS02625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008867|IPR013785 Aldolase-type TIM barrel|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.20.20.70|MF_00443|PF05690|PTHR34266|PTHR34266:SF2|SSF110399 METD_RS02630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR34472|PTHR34472:SF1|SSF54285|TIGR01683 METD_RS02635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006076|IPR012727|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|Glycine oxidase ThiO GO:0016491|GO:0050660|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF180|SSF51905|SSF54373|TIGR02352 METD_RS02640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001054|IPR029016|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|GAF domain-like|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PTHR11920|PTHR11920:SF348|SM00044|SSF55073|SSF55781 METD_RS02650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003313|IPR009057|IPR018060 AraC-type arabinose-binding/dimerisation domain|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.280|PF12833|PF14525|PTHR11019|PTHR11019:SF50|SM00342|SSF46689 METD_RS02655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23505|SSF103473 METD_RS02660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02393|TIGR02937 METD_RS02665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR019475|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF10410|PF13662|PIRSF002811|PTHR30313|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 METD_RS02670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|PTHR10907|PTHR10907:SF47|SSF63829 METD_RS02675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011042|IPR017996 Major royal jelly protein/Protein yellow|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF03022|PTHR10009|SSF63829 METD_RS02680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|PTHR28055|PTHR28055:SF1|SSF89095 METD_RS02685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 METD_RS02695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012480 Heparinase II/III-like PF07940 METD_RS02700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 PF00460 METD_RS02705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006299|IPR010930 Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF06429|PTHR30435|PTHR30435:SF2|TIGR01395 METD_RS02710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049 METD_RS02715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF19|SSF117143|TIGR02488|TIGR03506 METD_RS02720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|PTHR36307|SM00858|TIGR03170 METD_RS02725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010|PTHR30381|PTHR30381:SF0 METD_RS02730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006668 Magnesium transporter, MgtE intracellular domain G3DSA:1.25.60.10|PF03448|SSF158791 METD_RS02735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008|PTHR34933|PTHR34933:SF1 METD_RS02740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748 METD_RS02745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103 METD_RS02755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206 METD_RS02765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PTHR30329|PTHR30329:SF2|SSF103088 METD_RS02775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 METD_RS02780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 METD_RS02785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00486|PTHR26402|PTHR26402:SF578|SM00862|SSF46894|SSF52172 METD_RS02795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF0|SSF160544|TIGR00328 METD_RS02800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PR00954|PTHR30534|PTHR30534:SF0|SSF48029 METD_RS02805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|PTHR41277|PTHR41277:SF1|SSF101801|TIGR02480 METD_RS02810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025711 PepSY domain PF13670 METD_RS02820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039 METD_RS02825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|PTHR30433|PTHR30433:SF4|TIGR03818 METD_RS02830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|PTHR32194|SSF56235|TIGR03692 METD_RS02835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF00004|PF07724|PF10431|PTHR11262|PTHR11262:SF3|SM00382|SM01086|SSF52540|TIGR00390 METD_RS02840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF37|SSF103481 METD_RS02845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR024884 Metallo-beta-lactamase|N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 G3DSA:3.60.15.10|PF12706|PIRSF038896|PTHR15032|PTHR15032:SF4|SM00849|SSF56281 METD_RS02850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21266|SSF50022|SSF55961 METD_RS02865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 METD_RS02870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002701|IPR010951|IPR020822 Chorismate mutase|Chorismate mutase, bacteria|Chorismate mutase, type II GO:0046417 G3DSA:1.20.59.10|PF01817|SM00830|SSF48600|TIGR01795 METD_RS02875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|PTHR12919|SSF54565|TIGR00002 METD_RS02880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002676|IPR009000|IPR011033|IPR011961|IPR027275 16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|PTHR33692|SSF50346|SSF50447|TIGR02273 METD_RS02885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025333 Protein of unknown function DUF4239 PF14023 METD_RS02890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF849|SSF53335 METD_RS02900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088 METD_RS02905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006271|IPR015421|IPR015424|IPR022278 Phosphoserine aminotransferase|Phosphoserine aminotransferase, Methanosarcina-type|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|PIRSF000525|PTHR21152|PTHR21152:SF23|SSF53383|TIGR01365 METD_RS02910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002912|IPR006139|IPR006140|IPR006236|IPR016040|IPR029009|IPR029752|IPR029753 ACT domain|Allosteric substrate binding domain|D-3-phosphoglycerate dehydrogenase|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016597|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.1330.90|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF01842|PF02826|PS00065|PS00670|PS00671|PTHR10996|PTHR10996:SF20|SSF143548|SSF51735|SSF52283|SSF55021|TIGR01327 METD_RS02915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015066 Protein of unknown function DUF1902 PF08972|SSF143100 METD_RS02920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000649|IPR005251|IPR011559|IPR027363 Initiation factor 2B alpha/beta/delta|Initiation factor 2B-related|Methylthioribose-1-phosphate isomerase|Methylthioribose-1-phosphate isomerase-like, N-terminal domain GO:0044237|GO:0044249 G3DSA:1.20.120.420|G3DSA:3.40.50.10470|MF_01678|PF01008|PTHR10233|PTHR10233:SF6|SSF100950|TIGR00512|TIGR00524 METD_RS02925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021487 Protein of unknown function DUF3140 PF11338|PTHR40630 METD_RS02930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF95|TIGR00797 METD_RS02935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF203|SM00382|SSF52540|SSF90123 METD_RS02940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|PTHR12029|PTHR12029:SF31|SSF75217 METD_RS02945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF158472|SSF58104 METD_RS02950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007157 PspA/IM30 PF04012|PTHR31088|PTHR31088:SF7 METD_RS02955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010840 Protein of unknown function DUF1449 PF07290 METD_RS02960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001107|IPR027705|IPR031905 Band 7 domain|Flotillin family|Flotillin, C-terminal domain PF01145|PF15975|PTHR13806|PTHR13806:SF2|SM00244|SSF117892 METD_RS02965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR010916|IPR012910 TonB box, conserved site|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS00430|PTHR32552|PTHR32552:SF17|SSF56935|TIGR01783 METD_RS02970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001260|IPR018375 Coproporphyrinogen III oxidase, aerobic|Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|PF01218|PIRSF000166|PR00073|PS01021|PTHR10755|SSF102886 METD_RS02975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003840|IPR027417|IPR027785 DNA helicase|P-loop containing nucleoside triphosphate hydrolase|UvrD-like helicase C-terminal domain GO:0004386|GO:0005524 G3DSA:3.40.50.300|PF13538|PF13604|PTHR23274|SSF52540 METD_RS02980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015422|IPR015424|IPR024551 Aminotransferase, putative|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.90.1150.10|PF12897|PTHR11751|PTHR11751:SF110|SSF53383 METD_RS02985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00486|PTHR26402|PTHR26402:SF578|SM00862|SSF46894|SSF52172 METD_RS02990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|PF00700|SSF64518 METD_RS02995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 METD_RS03005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010626|IPR023157 AGR-C-984p-like domain|Protein of unknown function DUF1217 G3DSA:1.10.3700.10|PF06748|SSF158837 METD_RS03010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR010930|IPR012836|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF18|SSF117143|TIGR02490|TIGR03506 METD_RS03015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000194|IPR003593|IPR005714|IPR022426|IPR027417|IPR032463 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, type III secretion system, FliI|ATPase, type III secretion system, FliI/YscN|Flagellum-specific ATP synthase FliI, clade 3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0009288|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0044781 G3DSA:3.40.50.300|PF00006|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026|TIGR03498 METD_RS03020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR010930|IPR011491|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506 METD_RS03025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002371|IPR010930 Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PF06429|PTHR30033|PTHR30033:SF1|SSF64518|TIGR02492 METD_RS03030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|PF00700|SSF64518 METD_RS03035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010845 Flagellar FlaF GO:0044781 PF07309 METD_RS03040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 PF07378 METD_RS03045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005648 Flagellar hook capping protein PF03963|PTHR30435|PTHR30435:SF15 METD_RS03050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF2 METD_RS03055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001712|IPR006301 Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|PTHR30161|PTHR30161:SF1|TIGR01398 METD_RS03060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 PF01311|PR00953|PTHR30065 METD_RS03070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019301 Flagellar protein FlgJ, N-terminal PF10135 METD_RS03085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002220|IPR013785 Aldolase-type TIM barrel|DapA-like GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PTHR12128|SM01130|SSF51569 METD_RS03090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 METD_RS03095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009964 Protein of unknown function DUF1491 PF07372 METD_RS03100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090 METD_RS03105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PR00344|PTHR24423|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS03115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PTHR30365|PTHR30365:SF4|TIGR00203 METD_RS03120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF115|SSF103473 METD_RS03125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF79|SSF103473 METD_RS03130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|PTHR33204|PTHR33204:SF3|SSF46785 METD_RS03135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR001460|IPR012338|IPR016071|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase|Staphylococcal nuclease (SNase-like), OB-fold GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF5|SSF50199|SSF53955|SSF56601|TIGR02074 METD_RS03140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF158472|SSF58104 METD_RS03145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000845|IPR011271|IPR018017|IPR018953 AMP nucleosidase|AMP nucleoside phosphorylase, N-terminal|Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0008714|GO:0009116|GO:0044209 G3DSA:3.30.1730.10|G3DSA:3.40.50.1580|MF_01932|PF01048|PF10423|PTHR21234|PTHR21234:SF11|SSF53167|TIGR01717 METD_RS03150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023370 TsaA-like domain G3DSA:2.40.30.70|PF01980|PTHR12818|SSF118196|TIGR00104 METD_RS03155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 METD_RS03160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003806|IPR005479|IPR013815|IPR013816 ATP-grasp fold, DUF201-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0003824|GO:0005524|GO:0046872 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|PF02655|PS00866|SSF56059 METD_RS03165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014937 Protein of unknown function DUF1810 PF08837|PIRSF008546|PTHR41377|PTHR41377:SF1|SSF140736 METD_RS03170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF131|SSF52768 METD_RS03175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025993|IPR029044 Ceramide glucosyltransferase|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF13506|PTHR12726|SSF53448 METD_RS03195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002293|IPR004757 Amino acid/polyamine transporter I|Ethanolamine permease GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060|PTHR11785|PTHR11785:SF337|TIGR00908 METD_RS03200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487|PTHR11351|PTHR11351:SF34 METD_RS03205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|SM00418|SSF46785 METD_RS03210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PTHR11922|SSF52317 METD_RS03215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 METD_RS03220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR009594|IPR018060|IPR018062 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC, N-terminal GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF06719|PF12833|PS00041|PTHR11019|PTHR11019:SF81|SM00342|SSF46689 METD_RS03225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 METD_RS03230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011614|IPR020835 Catalase core domain|Catalase-like domain GO:0004096|GO:0020037|GO:0055114 G3DSA:2.40.180.10|SSF56634 METD_RS03255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS03260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS03270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 METD_RS03275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|PTHR33154:SF10|SM00418|SSF46785 METD_RS03280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007272 Sulphur transport domain PF04143|PTHR30574|PTHR30574:SF1 METD_RS03285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30574|PTHR30574:SF1 METD_RS03290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF9 METD_RS03295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF110|SM00849|SSF56281 METD_RS03300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 METD_RS03305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 METD_RS03310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF279|SM00448|SM00862|SSF46894|SSF52172 METD_RS03315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003834|IPR012336|IPR022910|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulphide interchange protein DsbD|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|PF02683|PF11412|PF13899|PTHR32234|PTHR32234:SF0|SSF52833|SSF74863 METD_RS03320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|PTHR13887|PTHR13887:SF25|SSF52833 METD_RS03325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS03330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF8|SSF82693|SSF82714|SSF82866 METD_RS03335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF4|SSF111369|TIGR01730 METD_RS03340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|PTHR13887|PTHR13887:SF25|SSF52833 METD_RS03345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|SSF75169 METD_RS03350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000866|IPR005746|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10438|PTHR10438:SF244|SSF52833 METD_RS03355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 METD_RS03370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024442|IPR024445 ISXO2-like transposase domain|Transposase, zinc-ribbon PF12760|PF12762 METD_RS03375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035|PTHR39327|PTHR39327:SF2 METD_RS03380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR24559|SSF46689|SSF53098 METD_RS03385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13531|PTHR30632|SSF53850 METD_RS03390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|PTHR37691|PTHR37691:SF1|SSF75169 METD_RS03395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003787|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein G3DSA:3.40.1260.10|PF02635|PTHR37691|PTHR37691:SF1|SSF75169 METD_RS03400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR23200|PTHR23200:SF42|SM00849|SSF56281 METD_RS03405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 METD_RS03410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|PTHR19372|PTHR19372:SF2|SSF56524|SSF81296|TIGR04555 METD_RS03415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006179|IPR008334|IPR029052|IPR030998 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Metallo-dependent phosphatase-like|Thiosulfohydrolase SoxB GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF02872|PR01607|PTHR11575|PTHR11575:SF16|SSF55816|SSF56300|TIGR04486 METD_RS03420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR025710 Cytochrome c-like domain|SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 G3DSA:1.10.760.10|PIRSF038455|SSF46626|TIGR04484 METD_RS03425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013783|IPR014756|IPR014880|IPR030995 Immunoglobulin E-set|Immunoglobulin-like fold|Sulphur oxidation protein SoxZ|Thiosulfate oxidation carrier complex protein SoxZ G3DSA:2.60.40.10|PF08770|SSF81296|TIGR04490 METD_RS03430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016568|IPR032711 Ig-like SoxY domain|Sulphur oxidation, SoxY G3DSA:2.60.40.730|PF13501|PIRSF010312|TIGR04488 METD_RS03435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR030999 Cytochrome c-like domain|Sulfur oxidation c-type cytochrome SoxX GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626|TIGR04485 METD_RS03440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13098|SSF52833 METD_RS03450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683|PTHR31272|PTHR31272:SF4 METD_RS03455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 METD_RS03460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|PTHR33154:SF9|SM00418|SSF46785 METD_RS03465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF1|SSF143744 METD_RS03470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007272 Sulphur transport domain PF04143|PTHR30574|PTHR30574:SF1 METD_RS03475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032711 Ig-like SoxY domain PF13501 METD_RS03480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001902|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 PF00916|PTHR11814|PTHR11814:SF76 METD_RS03495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.50.80|SSF52343 METD_RS03505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003781|IPR005810|IPR016040|IPR016102|IPR032875 CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF02629|PF13607|PIRSF001553|PR01798|PTHR11117|SM00881|SSF51735|SSF52210 METD_RS03510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|PTHR11815:SF1|SSF52210|SSF56059 METD_RS03515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PTHR11699|PTHR11699:SF168|SSF53720 METD_RS03520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000849|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|PTHR11662|PTHR11662:SF250|SSF103473 METD_RS03525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 METD_RS03535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000172|IPR007867|IPR012132|IPR023753 FAD/NAD(P)-binding domain|Glucose-methanol-choline oxidoreductase|Glucose-methanol-choline oxidoreductase, C-terminal|Glucose-methanol-choline oxidoreductase, N-terminal GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF00732|PF05199|PIRSF000137|PS00623|PS00624|PTHR11552|PTHR11552:SF51|SSF51905|SSF54373 METD_RS03540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005828|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|PTHR23508|PTHR23508:SF1|SSF103473 METD_RS03545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PF03601|PTHR30106|PTHR30106:SF2 METD_RS03550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572|IPR005066|IPR008335|IPR014756 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|PTHR19372|SSF56524|SSF81296 METD_RS03555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 SSF46626 METD_RS03560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|PTHR19372|SSF56524|SSF81296|TIGR04555 METD_RS03565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 METD_RS03570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR017820|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Sulphoacetaldehyde acetyltransferase|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0005737|GO:0019529|GO:0030976|GO:0050487 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|SSF52467|SSF52518|TIGR03457 METD_RS03575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005471|IPR011991|IPR014757|IPR029016 GAF domain-like|Transcription regulator IclR, C-terminal|Transcription regulator IclR, N-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|PF01614|PF09339|PTHR30136|SM00346|SSF46785|SSF55781 METD_RS03580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 METD_RS03590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010221 VCBS repeat TIGR01965 METD_RS03595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010221 VCBS repeat TIGR01965 METD_RS03605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR10245|PTHR10245:SF38|SM00530|SSF47413 METD_RS03610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR10245|PTHR10245:SF38|SM00530|SSF47413 METD_RS03660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS03665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR033469 CYTH-like domain SSF55154 METD_RS03675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012042|IPR023577|IPR033469 CYTH domain|CYTH-like domain|Inorganic triphosphatase NeuTTM/CthTTM-like G3DSA:2.40.320.10|PF01928|PIRSF016487|PTHR40114|SM01118|SSF55154 METD_RS03685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF251|SSF51905 METD_RS03690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032816 SNARE associated Golgi protein PF09335 METD_RS03695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003752|IPR023380|IPR024199 Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC|Uncharacterised conserved protein, DsbB-like GO:0015035|GO:0016020 G3DSA:1.20.1550.10|PF02600|PIRSF033913|SSF158442 METD_RS03700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003115|IPR014956|IPR016932 ParB/Sulfiredoxin|Putative ParB-like nuclease|Uncharacterised conserved protein UCP029669 G3DSA:1.10.8.10|G3DSA:3.90.1530.10|PF08857|PIRSF029669|SSF110849 METD_RS03705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757|PTHR23028 METD_RS03710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002740|IPR015947 EVE domain|PUA-like domain G3DSA:3.10.590.10|PF01878|PTHR14087|SSF88697 METD_RS03715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PTHR11728|SSF48179|SSF51735 METD_RS03720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PR00260|PTHR24422|PTHR24422:SF12|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 METD_RS03725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000905|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 METD_RS03730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|SSF69618 METD_RS03740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010817|IPR011990|IPR016982 HemY, N-terminal|Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP031802 GO:0005515 G3DSA:1.25.40.10|PF07219|PIRSF031802|SSF48452 METD_RS03750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS03755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS03760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040|IPR028939 NAD(P)-binding domain|Pyrroline-5-carboxylate reductase, catalytic, N-terminal G3DSA:3.40.50.720|PF03807|PTHR14239|SSF51735 METD_RS03765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF605|SM00829|SSF50129|SSF51735 METD_RS03770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS03775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS03780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007936|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Virulence-associated E PF05272|SSF52540 METD_RS03785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PTHR30461|SM00857|SSF53041 METD_RS03790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR013655|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF01590|PF08447|PTHR10799|PTHR10799:SF657|SM00052|SM00065|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 METD_RS03795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS03815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PTHR30461|SM00857|SSF53041 METD_RS03820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007936|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Virulence-associated E PF05272|SSF52540 METD_RS03825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119|IPR011109 DNA-binding recombinase domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PTHR30461|PTHR30461:SF3|SM00857|SSF109709|SSF53041 METD_RS03830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021322 Protein of unknown function DUF2924 PF11149 METD_RS03840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS03845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:2.40.50.100|PF13533|PTHR30367|PTHR30367:SF4 METD_RS03855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS03860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371|PTHR33055|PTHR33055:SF3 METD_RS03865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001804|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PTHR11835|PTHR11835:SF33|SM01329|SSF53659 METD_RS03870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025286 MOFRL-associated domain G3DSA:3.40.50.10180|PF13660|PTHR12227|PTHR12227:SF0|SSF82544 METD_RS03875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF28|SM00419|SSF46785|SSF51206 METD_RS03880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 METD_RS03890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR35006|SSF54593 METD_RS03900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|PTHR24291|PTHR24291:SF46|SSF48264 METD_RS03905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 METD_RS03915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS03920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002622|IPR009057|IPR011991 Homeodomain-like|Transposase, Synechocystis PCC 6803|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF01710|SSF46689 METD_RS03930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011006|IPR011991|IPR012318|IPR014710|IPR018490 CheY-like superfamily|Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|G3DSA:3.40.50.2300|PF00027|PF13545|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206|SSF52172 METD_RS03935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF22|SSF46785|SSF51206 METD_RS03950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF22|SM00100|SM00419|SSF46785|SSF51206 METD_RS03955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF22|SM00100|SM00419|SSF46785|SSF51206 METD_RS03965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|SSF56349 METD_RS03970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005532|IPR016187 C-type lectin fold|Sulfatase-modifying factor enzyme G3DSA:3.90.1580.10|PF03781|PTHR23150|SSF56436 METD_RS04000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR011102|IPR013655 PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|PF07536|PF08447|PF13426|PTHR24423|SM00086|SM00091|SM00911|SSF55785|TIGR00229 METD_RS04005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|SM00829|SSF50129|SSF51735 METD_RS04010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF28|SSF46785|SSF53850 METD_RS04020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS04025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS04030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS04035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR24559|SSF46689|SSF53098 METD_RS04045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 G3DSA:3.40.50.280|PF02310|SSF52242 METD_RS04050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004921|IPR006517 Archaeophage PsiM2, terminase large subunit|Terminase, large subunit PF03237|TIGR01630 METD_RS04060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001091|IPR002052|IPR002941|IPR003115|IPR015840|IPR029063 DNA methyase, ParB domain-containing|DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|ParB/Sulfiredoxin|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|G3DSA:3.90.1530.10|PF01555|PF02195|PIRSF036758|PR00508|PS00092|PTHR13370|SM00470|SSF110849|SSF53335 METD_RS04075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS04080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.10.150.20 METD_RS04085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR022192|IPR027417 Helicase, C-terminal|Mitochondrial degradasome RNA helicase subunit, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0016817 G3DSA:3.40.50.300|PF00271|PF12513|PTHR12131|SM00490|SSF52540 METD_RS04125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex RuvX-like domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|PTHR10724|PTHR10724:SF1|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 METD_RS04135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF117|SSF52540 METD_RS04145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR36109|PTHR36109:SF2 METD_RS04155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001712|IPR006301|IPR025505 FHIPEP conserved site|Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|PS00994|PTHR30161|PTHR30161:SF1|TIGR01398 METD_RS04160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR033480 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Single Cache domain 2 GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00672|PF17200|PR00260|PTHR32089|PTHR32089:SF56|SM00283|SM00304|SM01049|SSF58104 METD_RS04165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|PTHR34697|PTHR34697:SF2 METD_RS04170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PF02050|TIGR02473 METD_RS04175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000194|IPR003593|IPR004100|IPR005714|IPR020003|IPR022426|IPR027417|IPR032463 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI|ATPase, type III secretion system, FliI/YscN|Flagellum-specific ATP synthase FliI, clade 3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0009288|GO:0015992|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0044781|GO:0046034 G3DSA:3.40.50.300|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026|TIGR03498 METD_RS04180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF553|SM00448|SM00862|SSF52172 METD_RS04190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021724 Protein of unknown function DUF3297 PF11730 METD_RS04195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR23416|PTHR23416:SF59|SSF51161 METD_RS04200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002505|IPR012188|IPR012301|IPR012302|IPR015884|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic enzyme, phosphate acetyl/butaryl transferase|NAD(P)-binding domain|Phosphate acetyl/butaryl transferase GO:0004471|GO:0004473|GO:0005829|GO:0006108|GO:0008152|GO:0016616|GO:0016746|GO:0030145|GO:0046872|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.10750|G3DSA:3.40.50.720|PF00390|PF01515|PF03949|PIRSF036684|PS00331|PTHR23406|SM00919|SM01274|SSF51735|SSF53223|SSF53659 METD_RS04205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|G3DSA:3.10.28.20|PF03069|PTHR31891|PTHR31891:SF5|SSF141130 METD_RS04220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PF13692|PTHR22916|PTHR22916:SF26|SSF53448|SSF53756 METD_RS04225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13692|SSF53756 METD_RS04235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002933|IPR011650 Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PTHR11014|PTHR11014:SF72|SSF53187 METD_RS04240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 METD_RS04245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PTHR11908|PTHR11908:SF97|SM01092|SSF55447|SSF56176 METD_RS04250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF71|SM01008|SSF54665|SSF56003 METD_RS04255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259|TIGR00494 METD_RS04260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|SSF103481 METD_RS04265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain GO:0005618|GO:0006508|GO:0008237|GO:0016805 G3DSA:3.30.1380.10|MF_01924|PF01427|PIRSF026671|PTHR22935|PTHR22935:SF67|SSF55166 METD_RS04280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|PTHR33164|SM00347|SSF46785 METD_RS04285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PF13641|PTHR22916|SSF53448 METD_RS04290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005835|IPR013446|IPR029044 Glucose-1-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779|GO:0047343 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF16|SSF53448|TIGR02623 METD_RS04295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR013445|IPR016040 CDP-glucose 4,6-dehydratase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF33|SSF51735|TIGR02622 METD_RS04300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013630|IPR013691|IPR029063 C-methyltransferase|Methyltransferase putative zinc binding domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08421|PF08484|PF13489|PTHR10108|PTHR10108:SF714|SSF53335 METD_RS04305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|SSF51182 METD_RS04310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|SSF51735 METD_RS04315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 METD_RS04320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 METD_RS04325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003437|IPR015421|IPR015424|IPR020580|IPR020581 Glycine cleavage system P protein|Glycine cleavage system P-protein, N-terminal|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|MF_00711|PF02347|PTHR11773|PTHR11773:SF1|SSF53383|TIGR00461 METD_RS04330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|SSF51230|TIGR00527 METD_RS04335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006222|IPR006223|IPR013977|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|PF01571|PF08669|PIRSF006487|PTHR13847|PTHR13847:SF209|SSF101790|SSF103025|TIGR00528 METD_RS04345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR13693|PTHR13693:SF53|SSF53383 METD_RS04350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 METD_RS04360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24322|PTHR24322:SF540|SSF51735 METD_RS04365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837|PTHR33778|PTHR33778:SF3 METD_RS04370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF148|SSF52540 METD_RS04375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR33608|PTHR33608:SF6 METD_RS04380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025489 Protein of unknown function (DUF4381 PF14316 METD_RS04385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PTHR22550|PTHR22550:SF12|SM00327|SSF53300 METD_RS04390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SM00327|SSF53300 METD_RS04395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR013105 Tetratricopeptide repeat 2|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07719|SSF48452 METD_RS04400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025738 Aerotolerance-related protein BatD PF13584 METD_RS04405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011614|IPR020835 Catalase core domain|Catalase-like domain GO:0004096|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PTHR36195|PTHR36195:SF3|SSF56634 METD_RS04410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF70|SSF103481 METD_RS04420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023577|IPR033469 CYTH domain|CYTH-like domain G3DSA:2.40.320.10|SSF55154 METD_RS04425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|PTHR10173|PTHR10173:SF18|SSF51316|TIGR00357 METD_RS04430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017039 Virulence factor BrkB PF03631|PTHR30213|PTHR30213:SF2|TIGR00765 METD_RS04435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR011102|IPR013655 PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|PF07536|PF08447|PF13426|PTHR41523|PTHR41523:SF4|SM00086|SM00091|SM00911|SSF55785|TIGR00229 METD_RS04440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|PTHR24096:SF206|SSF56801 METD_RS04450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008160 Collagen triple helix repeat PF01391|PTHR24023 METD_RS04455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004792|IPR022460|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|Conserved hyptotheical protein CHP03862, flavoprotein, PP4765|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF03486|PR00419|PTHR10617|PTHR10617:SF103|SSF160996|SSF51905|TIGR00275|TIGR03862 METD_RS04460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005496|IPR022369 Integral membrane protein TerC|Integral membrane protein TerC, riboswitch-linked GO:0016021 PF03741|PTHR30238|PTHR30238:SF0|TIGR03718 METD_RS04470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR006286|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|Peptidase C56, PfpI GO:0016798 G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF115|SSF52317|TIGR01382 METD_RS04490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 METD_RS04500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008320 Uncharacterised conserved protein UCP032025 PF07370|PIRSF032025 METD_RS04505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.10.287.500|SSF75708 METD_RS04510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR020846|IPR024989|IPR026032 Major facilitator superfamily associated domain|Major facilitator superfamily domain|Probable 3-phenylpropionic acid transporter G3DSA:1.20.1250.20|PF12832|PIRSF004925|PTHR23522|PTHR23522:SF3|SSF103473 METD_RS04515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002645|IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE|STAS domain GO:0006810|GO:0043190 G3DSA:3.30.750.24|PF02405|PF13466|PTHR30188|PTHR30188:SF3|SSF52091|TIGR00056 METD_RS04520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF483|SM00382|SSF52540 METD_RS04525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003399 Mce/MlaD PF02470|PTHR36698|PTHR36698:SF2 METD_RS04530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 METD_RS04535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000760|IPR020550|IPR020583 Inositol monophosphatase|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PS00629|PS00630|PTHR20854|PTHR20854:SF38|SSF56655 METD_RS04545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000537|IPR006370|IPR030470|IPR031103 4-hydroxybenzoate octaprenyltransferase|4-hydroxybenzoate polyprenyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0006744|GO:0016021 MF_01635|PF01040|PS00943|PTHR11048|PTHR11048:SF28|TIGR01474 METD_RS04555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|PTHR30027:SF3|SSF75217|SSF88697|TIGR00046 METD_RS04560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006034|IPR027473|IPR027474 Asparaginase/glutaminase|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PTHR11707|PTHR11707:SF29|SM00870|SSF53774 METD_RS04565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006336|IPR011556 Glutamate--cysteine ligase, GCS2|Glutamate--cysteine ligase, plant GO:0004357|GO:0006750|GO:0042398 PF04107|PIRSF017901|PTHR34378|PTHR34378:SF1|SSF55931|TIGR01436 METD_RS04575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PS01148|PTHR33279|SSF64307 METD_RS04580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR004385|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like|Nucleoside diphosphate pyrophosphatase GO:0016787|GO:0016818|GO:0046872 G3DSA:3.90.79.10|PF00293|PTHR11839|SSF55811|TIGR00052 METD_RS04585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022254 Protein of unknown function DUF3775 PF12616 METD_RS04590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016090 Phospholipase A2 domain G3DSA:1.20.90.10|SSF48619 METD_RS04595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011969|IPR021109 Aspartic peptidase domain|Clan AA aspartic peptidase, C-terminal PF13650|PTHR41535|PTHR41535:SF1|SSF50630|TIGR02281 METD_RS04600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010710 Protein of unknown function DUF1289 PF06945|PTHR35175 METD_RS04610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 MF_00719|PF02654|PTHR34148|PTHR34148:SF1|TIGR00317 METD_RS04615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003200|IPR017846|IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009163|GO:0009236 G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|MF_00230|PF02277|PTHR21712|PTHR21712:SF4|SSF52733|TIGR03160 METD_RS04620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF490|SM00387|SM00388|SSF47384|SSF55874 METD_RS04625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF82|SSF47741|SSF54292 METD_RS04630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|PTHR11908|PTHR11908:SF79|SM01008|SSF56003 METD_RS04635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003018|IPR011102|IPR013655|IPR013656|IPR029016 GAF domain|GAF domain-like|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|PF07536|PF08447|PF08448|PF13185|PTHR24423|PTHR24423:SF522|SM00065|SM00086|SM00091|SM00911|SSF55781|SSF55785|TIGR00229 METD_RS04640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|SSF75304 METD_RS04645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009683 Extensin-like, C-terminal PF06904 METD_RS04655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001568|IPR018188|IPR033130 Ribonuclease T2, His active site 1|Ribonuclease T2, His active site 2|Ribonuclease T2-like GO:0003723|GO:0033897 G3DSA:3.90.730.10|PF00445|PS00530|PS00531|PTHR11240|SSF55895 METD_RS04660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007473|IPR029063 Ribosomal RNA large subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008649|GO:0070475 G3DSA:3.40.50.150|MF_00934|PF04378|PTHR37426|PTHR37426:SF1|SSF53335 METD_RS04675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF78|SSF55103|SSF56176 METD_RS04680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002327|IPR009056 Cytochrome c, class IA/ IB|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PR00604|PTHR11961|SSF46626 METD_RS04685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|PTHR33164:SF5|SM00347|SSF46785 METD_RS04695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010621 Domain of unknown function DUF1214 G3DSA:2.60.120.600|PF06742|SSF160935 METD_RS04700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 METD_RS04705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005358|IPR008228 Putative zinc- or iron-chelating domain containing protein|Uncharacterised conserved protein UCP006173 MF_00676|PF03692|PIRSF006173|PTHR37421|PTHR37421:SF1 METD_RS04710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 METD_RS04715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012495 TadE-like PF07811 METD_RS04720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012495 TadE-like PF07811 METD_RS04725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035|IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal|von Willebrand factor, type A G3DSA:3.40.50.410|PF13400|SSF53300 METD_RS04730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005654|IPR027417 ATPase, AFG1-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03969|PTHR12169|SSF52540 METD_RS04735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003180|IPR011034 Formyl transferase, C-terminal-like|Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003824|GO:0003905|GO:0006284 G3DSA:3.10.300.10|MF_00527|PF02245|PTHR10429|PTHR10429:SF0|SSF50486|TIGR00567 METD_RS04740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|PTHR10642|SSF53098 METD_RS04760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0003824|GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|PTHR21621|PTHR21621:SF4|SSF52440|SSF56059|TIGR01380 METD_RS04765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004705|IPR006153|IPR018422 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family|Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR10110|PTHR10110:SF86|TIGR00831 METD_RS04770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR002502 N-acetylmuramoyl-L-alanine amidase domain|Peptidoglycan binding-like GO:0008745|GO:0009253 G3DSA:1.10.101.10|G3DSA:3.40.80.10|PF01471|PF01510|PTHR30417|SM00644|SSF47090|SSF55846 METD_RS04775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623|IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|DnaJ domain|TerB-like G3DSA:1.10.287.110|G3DSA:1.10.3680.10|PF00226|PF05099|SM00271|SSF158682|SSF46565 METD_RS04785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|G3DSA:3.30.70.790|MF_00822|PF02814|SM00988|SSF69287|SSF69737 METD_RS04795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001269|IPR004653|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:3.20.20.70|MF_02041|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF29|SSF51395 METD_RS04800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF12860|PTHR10799|PTHR10799:SF657|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 METD_RS04805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS04810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 METD_RS04815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR010930|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506 METD_RS04820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002371|IPR010930 Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 PF06429|PTHR30033|PTHR30033:SF1|SSF64518|TIGR02492 METD_RS04825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF64518 METD_RS04830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025430 Domain of unknown function DUF4167 PF13763 METD_RS04835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002052|IPR004556|IPR019874|IPR025714|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF13847|PS00092|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 METD_RS04840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 METD_RS04845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018728 Domain of unknown function DUF2268 PF10026 METD_RS04850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000121|IPR003018|IPR006318|IPR008279|IPR008731|IPR015813|IPR023151|IPR029016 GAF domain|GAF domain-like|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphotransferase system, enzyme I N-terminal|Phosphotransferase system, enzyme I-like|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005515|GO:0009401|GO:0016310|GO:0016772 G3DSA:1.10.274.10|G3DSA:3.20.20.60|G3DSA:3.30.450.40|G3DSA:3.50.30.10|PF00391|PF02896|PF05524|PF13185|PR01736|PS00742|PTHR22931|PTHR22931:SF23|SM00065|SSF47831|SSF51621|SSF52009|SSF55781|TIGR01417 METD_RS04855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001048|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795 ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain GO:0004072|GO:0008152|GO:0008652|GO:0009089|GO:0016597 G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PS00324|PTHR21499|PTHR21499:SF27|SSF53633|SSF55021|TIGR00656|TIGR00657 METD_RS04860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010233|IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008152|GO:0008168|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF08241|PTHR10108|PTHR10108:SF902|SSF53335|TIGR01983 METD_RS04865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005247|IPR008914 Phosphatidylethanolamine-binding protein|YbhB/YbcL G3DSA:3.90.280.10|PF01161|PTHR30289|SSF49777|TIGR00481 METD_RS04870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF31|SM00829|SSF50129|SSF51735 METD_RS04875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|PTHR30194|SSF53098|TIGR00228 METD_RS04880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007372 Lipid/polyisoprenoid-binding, YceI-like G3DSA:2.40.128.110|PF04264|PTHR34406|PTHR34406:SF1|SM00867|SSF101874 METD_RS04885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000085|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SSF46929|SSF47781|SSF50249|TIGR00084 METD_RS04890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021955 Protein of unknown function DUF3572 PF12096 METD_RS04895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|SM00448|SSF52172 METD_RS04900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PTHR26402|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 METD_RS04905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF4|SSF46785|TIGR00738 METD_RS04910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000971|IPR001221|IPR001433|IPR001709|IPR008333|IPR009050|IPR012292|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Globin|Globin-like|Globin/Protoglobin|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0019825|GO:0020037|GO:0055114 G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00042|PF00175|PF00970|PR00371|PR00410|PTHR22924|PTHR22924:SF49|SSF46458|SSF52343|SSF63380 METD_RS04925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001926|IPR005856|IPR005859 Cysteine synthase|Cysteine synthase CysK|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PTHR10314|PTHR10314:SF110|SSF53686|TIGR01136|TIGR01139 METD_RS04930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724 METD_RS04940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|PTHR22912|PTHR22912:SF180|SSF51905|SSF55424 METD_RS04945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF5|SSF46785|SSF53850 METD_RS04950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000146|IPR020548|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1,6-bisphosphatase, active site|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0042132|GO:0042578 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|PS00124|PTHR11556|SSF56655 METD_RS04955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006082|IPR006083|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase|Phosphoribulokinase/uridine kinase GO:0005524|GO:0005975|GO:0008152|GO:0008974|GO:0016301 G3DSA:3.40.50.300|PF00485|PR00478|PS00567|PTHR10285|PTHR10285:SF72|SSF52540 METD_RS04960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003386|IPR029058 Alpha/Beta hydrolase fold|Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 G3DSA:3.40.50.1820|PF02450|SSF53474 METD_RS04965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|SSF75625|TIGR01033 METD_RS04970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PTHR36839|PTHR36839:SF1|SM00849|SSF56281 METD_RS04980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 METD_RS04985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667 METD_RS04990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|SSF52266 METD_RS04995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014550 Uncharacterised conserved protein UCP028704, OpgC PF10129|PIRSF028704|PTHR38592 METD_RS05000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|PTHR18901:SF21|SSF56784|TIGR01509 METD_RS05005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PTHR11749|SSF51366|TIGR01163 METD_RS05010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13420|PTHR23091|PTHR23091:SF187|SSF55729 METD_RS05015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000310|IPR005308|IPR008286|IPR011193|IPR015421|IPR015422|IPR015424 Orn/Lys/Arg decarboxylase, C-terminal|Orn/Lys/Arg decarboxylase, N-terminal|Orn/Lys/Arg decarboxylase, major domain|Ornithine/lysine/arginine decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0005737|GO:0006520|GO:0016831 G3DSA:3.40.640.10|G3DSA:3.90.100.10|G3DSA:3.90.1150.10|PF01276|PF03709|PF03711|PIRSF009393|PS00703|PTHR11751|PTHR11751:SF425|SSF53383|SSF55904 METD_RS05020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 METD_RS05025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453|IPR008284|IPR012245|IPR013484 MoaB/Mog domain|Molybdenum cofactor biosynthesis protein B, proteobacteria|Molybdenum cofactor biosynthesis protein MoaB|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PIRSF006443|PS01078|PTHR10192|PTHR10192:SF18|SM00852|SSF53218|TIGR00177|TIGR02667 METD_RS05030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000362|IPR004769|IPR008948|IPR019468|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF2|SM00998|SSF48557|TIGR00928 METD_RS05035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF38|SSF56752 METD_RS05045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 METD_RS05055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00961|PF00140|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|PTHR30376|SSF88659|SSF88946|TIGR02392|TIGR02937 METD_RS05060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS05065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PTHR33121|PTHR33121:SF13|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 METD_RS05075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 METD_RS05080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 METD_RS05090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS05095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 METD_RS05105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF17|SSF56935|TIGR01783 METD_RS05110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000801|IPR029058 Alpha/Beta hydrolase fold|Putative esterase G3DSA:3.40.50.1820|PF00756|PTHR40841|PTHR40841:SF2|SSF53474 METD_RS05130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119|IPR011109 DNA-binding recombinase domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PTHR30461|PTHR30461:SF3|SM00857|SSF53041 METD_RS05135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119|IPR011109 DNA-binding recombinase domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PTHR30461|PTHR30461:SF3|SM00857|SSF53041 METD_RS05145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029052 Metallo-dependent phosphatase-like G3DSA:3.60.21.10|SSF56300 METD_RS05150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 METD_RS05155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR24559|SSF46689|SSF53098 METD_RS05160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS05165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002622|IPR009057|IPR011991 Homeodomain-like|Transposase, Synechocystis PCC 6803|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF01710|SSF46689 METD_RS05180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41 GO:0004222|GO:0005524|GO:0006508 G3DSA:3.40.50.300|PF00004|PF01434|PS00674|PTHR23076|PTHR23076:SF37|SM00382|SSF140990|SSF52540 METD_RS05185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021698|IPR029063 Protein of unknown function DUF2380|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF11684 METD_RS05190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.1060|SSF54909 METD_RS05195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|SSF88659|SSF88946|TIGR02937 METD_RS05200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR13504|PTHR13504:SF32|SSF140931 METD_RS05205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820 METD_RS05220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966|PTHR37944|PTHR37944:SF2 METD_RS05230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF528|SM00448|SM00862|SSF46894|SSF52172 METD_RS05235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF533|SM00304|SM00387|SM00388|SSF47384|SSF55874 METD_RS05250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 METD_RS05255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS05265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|PTHR11562|PTHR11562:SF17|SSF160240|SSF161111|TIGR01297 METD_RS05275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018712 Domain of unknown function DUF2235 PF09994|PTHR33840|PTHR33840:SF4 METD_RS05280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011664 Abortive infection system protein AbiD/AbiF-like PF07751 METD_RS05310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23513|PTHR23513:SF4|SSF103473 METD_RS05315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PF02583|PTHR33677|PTHR33677:SF3 METD_RS05320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF143011 METD_RS05325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010359|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|HTH domain, IrrE-type|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PF06114|PTHR36924|SM00530|SSF47413|TIGR02607 METD_RS05335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029052 Metallo-dependent phosphatase-like G3DSA:3.60.21.10 METD_RS05350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866 METD_RS05355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 METD_RS05375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 METD_RS05380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PF02683|PTHR31272 METD_RS05385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336|IPR013766|IPR017937 Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0045454 G3DSA:3.40.30.10|PF00085|PS00194|SSF52833 METD_RS05390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001646 Pentapeptide repeat PF00805|PTHR14136|PTHR14136:SF0|SSF141571 METD_RS05405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF2 METD_RS05410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF13276|PTHR32552|PTHR32552:SF34|SSF53098 METD_RS05415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR011991 Homeodomain-like|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF13384|SSF46689 METD_RS05420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS05440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR36699|SSF141523 METD_RS05445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PTHR33695|PTHR33695:SF1|TIGR00077 METD_RS05450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00941|PS00154|PS01047|PTHR24093|PTHR24093:SF317|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01512|TIGR01525 METD_RS05455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000551|IPR009061|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PTHR30204|PTHR30204:SF18|SM00422|SSF46955 METD_RS05465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR007029|IPR008250|IPR009078|IPR011017|IPR018303|IPR023214|IPR023299|IPR027256 Ferritin-like superfamily|HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|TRASH domain|YHS domain GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PF04945|PR00119|PR00943|PS00154|PTHR24093|SM00746|SSF47240|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 METD_RS05470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005183|IPR012347 Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713 METD_RS05475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR37310 METD_RS05480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005183|IPR012347 Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713|PTHR36933|PTHR36933:SF1 METD_RS05490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS05495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 METD_RS05505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006121|IPR017969 Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PS01047|SSF55008 METD_RS05510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 METD_RS05515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007332 Protein of unknown function DUF411 PF04214 METD_RS05520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF19|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS05525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|PTHR30097|PTHR30097:SF3|SSF111369|TIGR01730 METD_RS05530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032693 YtkA-like domain PF13115 METD_RS05550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS05560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS05565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009495 Protein of unknown function DUF1109 PF06532 METD_RS05575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR001952|IPR011049|IPR017849|IPR017850|IPR018511 Alkaline phosphatase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0003824|GO:0005509|GO:0008152|GO:0016791 G3DSA:2.150.10.10|G3DSA:3.40.720.10|PF00245|PF00353|PR00313|PS00330|PTHR11596|PTHR11596:SF5|SM00098|SSF51120|SSF53649 METD_RS05580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS05585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS05590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS05605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|PTHR32552:SF19|SSF56935|TIGR01783 METD_RS05610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005625 PepSY-associated TM protein PF03929 METD_RS05615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 METD_RS05620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PF01758 METD_RS05625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|SM00418|SSF46785 METD_RS05630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PF12729|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SSF58104 METD_RS05640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005025|IPR014063|IPR029039 Arsenate resistance ArsH|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30041|PTHR30041:SF1|SSF52218|TIGR02690 METD_RS05645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|PTHR33154:SF9|SM00418|SSF46785 METD_RS05650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|PTHR11717|PTHR11717:SF18|SM00226|SSF52788 METD_RS05655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF0|SSF52833|TIGR00014 METD_RS05660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002657|IPR004706 Arsenical-resistance protein Acr3|Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0015103|GO:0015297|GO:0016020|GO:0016021 PF01758|PTHR10361|PTHR10361:SF31 METD_RS05665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS05670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS05675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS05680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021698 Protein of unknown function DUF2380 PF11684 METD_RS05690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011008 Dimeric alpha-beta barrel G3DSA:3.30.70.1060|SSF54909 METD_RS05705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 METD_RS05710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS05720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005183|IPR009078|IPR012347 Domain of unknown function DUF305|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF03713|PTHR36933|PTHR36933:SF1|SSF47240 METD_RS05725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR37310 METD_RS05735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR007029|IPR008250|IPR009078|IPR011017|IPR018303|IPR023214|IPR023299|IPR027256 Ferritin-like superfamily|HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|TRASH domain|YHS domain GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PF04945|PR00119|PR00943|PS00154|PTHR24093|SM00746|SSF47240|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01512|TIGR01525 METD_RS05740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007332 Protein of unknown function DUF411 PF04214 METD_RS05760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF36|SSF56935 METD_RS05770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PF02583|PTHR33677|PTHR33677:SF3 METD_RS05780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR011049|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PS00330|SSF51120 METD_RS05790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002934|IPR025184 Domain of unknown function DUF4111|Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|PF13427|SSF81301 METD_RS05795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007029|IPR009078 Ferritin-like superfamily|YHS domain PF04945|PTHR24093|PTHR24093:SF50|SSF47240 METD_RS05800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|SSF53955 METD_RS05810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007332 Protein of unknown function DUF411 PF04214 METD_RS05815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF19|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS05820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|PTHR30097|PTHR30097:SF3|SSF111369|TIGR01730 METD_RS05825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032693 YtkA-like domain PF13115 METD_RS05835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009495 Protein of unknown function DUF1109 PF06532 METD_RS05840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF3|SSF88659|SSF88946|TIGR02937 METD_RS05850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005183|IPR012347 Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713 METD_RS05865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF9|SSF56954 METD_RS05870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PS00080|PTHR11709|PTHR11709:SF33|SSF49503 METD_RS05875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 METD_RS05880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005183|IPR012347|IPR021647 Copper binding periplasmic protein CusF|Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713|PF11604 METD_RS05885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 METD_RS05895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683 METD_RS05900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF384|SM00345|SM00895|SSF46785|SSF48008 METD_RS05905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11662|PTHR11662:SF3|SSF103473 METD_RS05910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001804|IPR011829|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF33|SM01329|SSF53659|TIGR02089 METD_RS05915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007835|IPR025286 MOFRL domain|MOFRL-associated domain G3DSA:3.40.1480.10|G3DSA:3.40.50.10180|PF05161|PF13660|PTHR12227|PTHR12227:SF0|SSF82544 METD_RS05920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PTHR11817|SSF50800|SSF51621|SSF52935|TIGR01064 METD_RS05930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005025|IPR014063|IPR029039 Arsenate resistance ArsH|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30041|PTHR30041:SF1|SSF52218|TIGR02690 METD_RS05935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|PTHR11717|PTHR11717:SF18|SM00226|SSF52788 METD_RS05940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF0|SSF52833|TIGR00014 METD_RS05945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002657|IPR004706 Arsenical-resistance protein Acr3|Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0015103|GO:0015297|GO:0016020|GO:0016021 PF01758|PIRSF005508|PTHR10361|PTHR10361:SF31|TIGR00832 METD_RS05950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF126|SSF103473 METD_RS05960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000209|IPR015500|IPR022398 Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00137|PTHR10795|PTHR10795:SF419|SSF52743 METD_RS05965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF19|SSF88659|SSF88946|TIGR02937 METD_RS06000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS06005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 METD_RS06025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000551|IPR009061|IPR015358 MerR-type HTH domain|Putative DNA-binding domain|Transcription regulator MerR, DNA binding GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF00376|PF09278|PR00040|PTHR30204|PTHR30204:SF18|SM00422|SSF46955 METD_RS06030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00941|PS00154|PS01047|PTHR24093|PTHR24093:SF126|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01512|TIGR01525 METD_RS06035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032874 DDE domain PF13610 METD_RS06045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS06050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS06055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824 METD_RS06060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS06065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007948 Protein of unknown function DUF736 PF05284 METD_RS06070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|PF02195|PTHR33375|PTHR33375:SF2|SM00470|SSF109709|SSF110849 METD_RS06075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013610|IPR017113 Antirestriction, ArdC|Domain of unknown function DUF1738 PF08401|PIRSF037112 METD_RS06085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS06100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PTHR30007|PTHR30007:SF0 METD_RS06105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371|PTHR33055|PTHR33055:SF1 METD_RS06110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF2 METD_RS06120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008928|IPR010401|IPR032790|IPR032856 Glycogen debranching enzyme|Glycogen debranching enzyme, C-terminal|Putative glycogen debranching enzyme, N-terminal|Six-hairpin glycosidase-like GO:0003824|GO:0004134|GO:0004135|GO:0005980 PF06202|PF14742|PTHR10569|PTHR10569:SF1|SSF48208 METD_RS06135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS06140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 PF05275 METD_RS06145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001117|IPR002355|IPR006376|IPR008972|IPR011706|IPR011707|IPR033138 Copper-resistance protein CopA|Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Multicopper oxidases, conserved site GO:0005507|GO:0016491|GO:0042597|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00079|PS00080|PTHR11709|PTHR11709:SF33|SSF49503|TIGR01480 METD_RS06150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 METD_RS06155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 METD_RS06160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012427 Protein of unknown function DUF1622 PF07784|PTHR38468 METD_RS06170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 METD_RS06175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PS00197|PTHR19370|PTHR19370:SF123|SSF52343|SSF54292|SSF63380 METD_RS06185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011031 Multihaem cytochrome G3DSA:1.10.3820.10|G3DSA:3.90.10.10|SSF48695 METD_RS06190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR37310 METD_RS06195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002505|IPR012147 Phosphate acetyl/butaryl transferase|Phosphate acetyl/butyryltransferase GO:0008152|GO:0016746 G3DSA:3.40.50.10750|PF01515|PIRSF000428|SSF53659 METD_RS06200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 METD_RS06205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024501|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3141 G3DSA:3.40.50.1820|PF11339|SSF53474 METD_RS06210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007318 Phospholipid methyltransferase PF04191|PTHR12714|PTHR12714:SF11 METD_RS06215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021682 Protein of unknown function DUF2933 PF11666 METD_RS06225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|SSF90123 METD_RS06245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS06250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS06255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF1|SSF46785|SSF53850 METD_RS06260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR33570|PTHR33570:SF5|SSF51182 METD_RS06265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF28|SSF103473 METD_RS06270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF330|SM00822|SSF51735 METD_RS06275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029000 Cyclophilin-like domain SSF50891 METD_RS06280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PTHR10907|SSF63829 METD_RS06290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SSF51735 METD_RS06295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF1|SSF46785|SSF53850 METD_RS06300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 METD_RS06305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PTHR11908|PTHR11908:SF97|SM01092|SSF55447|SSF56176 METD_RS06310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF71|SM01008|SSF54665|SSF56003 METD_RS06315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR33570|PTHR33570:SF5|SSF51182 METD_RS06325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004881|IPR010914|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, putative|RsgA type GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:3.40.50.300|MF_01820|PF03193|PTHR32120|PTHR32120:SF8|SSF52540|TIGR00157 METD_RS06360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain G3DSA:3.40.50.720|PF04321|PTHR12126|SSF51735 METD_RS06365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR37946|PTHR37946:SF1|SSF53474 METD_RS06370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR020846|IPR024989|IPR026032 Major facilitator superfamily associated domain|Major facilitator superfamily domain|Probable 3-phenylpropionic acid transporter G3DSA:1.20.1250.20|PF12832|PIRSF004925|PTHR23522|PTHR23522:SF3|SSF103473 METD_RS06375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR005259|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00270|PF00271|PTHR30580|SM00487|SM00490|SSF52540|TIGR00595 METD_RS06380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002645|IPR021866 STAS domain|SpoIIAA-like G3DSA:3.40.50.10600|PF11964|SSF52091 METD_RS06395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF320|SM00822|SSF51735 METD_RS06400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF13|SSF52499 METD_RS06405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR027399 Alcohol dehydrogenase GroES-associated|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PF13823|PTHR11695|PTHR11695:SF281|SSF50129|SSF51735 METD_RS06410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13515|PTHR30509 METD_RS06415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF105|SSF51735 METD_RS06420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF330|SSF51735 METD_RS06430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004147|IPR011009 Protein kinase-like domain|UbiB domain G3DSA:3.90.1200.10|PF03109|PTHR10566|PTHR10566:SF10|SSF56112 METD_RS06470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 METD_RS06475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009739 Protein of unknown function DUF1311 PF07007 METD_RS06480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000924|IPR001412|IPR014729|IPR020058 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016876|GO:0043039 G3DSA:3.40.50.620|G3DSA:3.90.800.10|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF52374 METD_RS06495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF13589|PIRSF002583|PR00775|PS00298|PTHR11528|PTHR11528:SF44|SSF110942|SSF54211|SSF55874 METD_RS06505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235 METD_RS06510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004006|IPR004007 DhaK domain|DhaL domain GO:0004371|GO:0006071 G3DSA:3.30.1180.20|G3DSA:3.40.50.10440|PF02733|PF02734|PTHR28629|PTHR28629:SF4|SM01120|SSF101473|SSF82549 METD_RS06515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 METD_RS06520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF3|SSF103473|TIGR04259 METD_RS06525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR006365|IPR012818|IPR014008|IPR014776|IPR014777|IPR029063 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase|Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase|Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit|S-adenosyl-L-methionine-dependent methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008276|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.150|PF00590|PIRSF036428|PTHR14741|PTHR14741:SF34|SSF53335|SSF53790|TIGR02467|TIGR02469 METD_RS06530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002750 CobE/GbiG C-terminal domain GO:0009236 G3DSA:3.30.420.180|PF01890|PTHR37477|PTHR37477:SF1|SSF159664 METD_RS06535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS06540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF29|SSF46785|SSF53850 METD_RS06545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007896 Chlorhexidine efflux transporter PF05232|PTHR42641 METD_RS06550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR003043|IPR006362|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0009236|GO:0046026|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|PS00840|PTHR21091|PTHR21091:SF17|SSF53790|TIGR01465 METD_RS06555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00027|PF01656|PF07685|PTHR21343|PTHR21343:SF6|SSF52317|SSF52540|TIGR00379 METD_RS06560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR10245|PTHR10245:SF38|SM00530|SSF47413 METD_RS06565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR34474|PTHR34474:SF2|SSF54909 METD_RS06570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23505|PTHR23505:SF8|SSF103473 METD_RS06575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003362|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PF02397|PF13727|PTHR30576|PTHR30576:SF0|TIGR03025 METD_RS06580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF6|SSF46785 METD_RS06585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF581|SM00382|SSF52540 METD_RS06590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001626|IPR029022 ABC transporter, BtuC-like|ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 PF00950|PTHR30477|PTHR30477:SF3|SSF81345 METD_RS06595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 METD_RS06600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011757|IPR023346|IPR031304 Lysozyme-like domain|Lytic transglycosylase MltB|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|PTHR30163|SSF53955 METD_RS06605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006840|IPR013024 Butirosin biosynthesis, BtrG-like|ChaC-like protein G3DSA:3.10.490.10|PF04752|PTHR12192|PTHR12192:SF9|SSF110857 METD_RS06615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 MF_00201|PD202328|PF02565|PF11967|PTHR33991|SSF50249|SSF57863|TIGR00613 METD_RS06620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002205|IPR005742|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01062 METD_RS06625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004368|IPR006196|IPR012340 Nucleic acid-binding, OB-fold|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SSF50249|TIGR00008 METD_RS06630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF20|SSF53822 METD_RS06635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003777 XdhC- CoxI PF02625|PTHR30388 METD_RS06640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027051 XdhC Rossmann domain PF13478|PTHR30388|PTHR30388:SF4 METD_RS06645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PTHR10192|PTHR10192:SF13|SM00852|SSF53218 METD_RS06650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|PTHR19136|PTHR19136:SF78|SSF53448 METD_RS06655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002376|IPR005793|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal GO:0003824|GO:0009058|GO:0016742 G3DSA:3.10.25.10|G3DSA:3.40.50.170|PF00551|PF02911|PTHR11138|SSF50486|SSF53328 METD_RS06660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|SM00822|SSF51735 METD_RS06665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR031485 Cellulose biosynthesis protein BcsS PF17036 METD_RS06670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010331 Exopolysaccharide synthesis, ExoD PF06055|PIRSF033239|PTHR41795 METD_RS06675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF111|SM00382|SSF52540 METD_RS06680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|PTHR30489|TIGR02212 METD_RS06685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR023716 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Proline-tRNA ligase, class IIa, type 2|Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0000166|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_01570|PF00587|PF03129|PR01046|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|TIGR00409 METD_RS06690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009935 Protein of unknown function DUF1467 PF07330 METD_RS06695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017515|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Methylmalonyl-CoA epimerase G3DSA:3.10.180.10|PF13669|PTHR21366|PTHR21366:SF9|SSF54593|TIGR03081 METD_RS06700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR004613|IPR011108 Metallo-beta-lactamase|Ribonuclease J|Zn-dependent metallo-hydrolase, RNA specificity domain GO:0003723|GO:0046872 G3DSA:3.60.15.10|PF00753|PF07521|PTHR11203|PTHR11203:SF22|SM00849|SSF56281 METD_RS06705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003142|IPR004143|IPR004408|IPR008988 Biotin protein ligase, C-terminal|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Transcriptional repressor, C-terminal GO:0004077|GO:0006464 G3DSA:2.30.30.100|G3DSA:3.30.930.10|PF02237|PF03099|PTHR12835|SSF50037|SSF55681 METD_RS06710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001750|IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 MF_00445|PF00361|PR01434|PTHR22773|PTHR22773:SF41|TIGR01770 METD_RS06715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000260|IPR001750|IPR003918|IPR010227 NADH-quinone oxidoreductase, chain M/4|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase|NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0008137|GO:0042773|GO:0055114 PF00361|PF01059|PR01437|PTHR22773|PTHR22773:SF40|TIGR01972 METD_RS06720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001516|IPR001750|IPR003945|IPR018393 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH-plastoquinone oxidoreductase, chain 5|NADH-plastoquinone oxidoreductase, chain 5 subgroup|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit GO:0008137|GO:0042773|GO:0055114 PF00361|PF00662|PR01434|PR01435|PTHR22773|PTHR22773:SF50|TIGR01974 METD_RS06725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MF_01456|PF00420|PTHR11434 METD_RS06730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 PF00499|PTHR33269|PTHR33269:SF4 METD_RS06735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010226|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 G3DSA:1.10.1060.10|MF_01351|PF12838|PS00198|PTHR10849|PTHR10849:SF20|SSF54862|TIGR01971 METD_RS06740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MF_01350|PF00146|PS00668|PTHR11432|PTHR11432:SF3 METD_RS06745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000283|IPR001041|IPR006656|IPR010228|IPR012675|IPR015405|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Molybdopterin oxidoreductase|NADH-quinone oxidoreductase, chain G, C-terminal|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0016651|GO:0042773|GO:0051536|GO:0055114 G3DSA:3.10.20.30|G3DSA:3.40.50.740|PF00384|PF09326|PF10588|PF13510|PS00642|PS00643|PTHR11615|PTHR11615:SF115|SM00929|SSF53706|SSF54292|SSF54862|TIGR01973 METD_RS06750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001949|IPR011537|IPR011538|IPR019554|IPR019575 NADH ubiquinone oxidoreductase, F subunit|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain GO:0008137|GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 PF01512|PF10531|PF10589|PS00644|PS00645|PTHR11780|SM00928|SSF140490|SSF142019|SSF142984|TIGR01959 METD_RS06755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PS01099|PTHR10371|SSF52833|TIGR01958 METD_RS06760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001135|IPR014029|IPR022885|IPR029014 NAD(P)H-quinone oxidoreductase subunit D/H|NADH-quinone oxidoreductase, subunit D|NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site|NiFe hydrogenase-like GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|MF_01358|PF00346|PS00535|PTHR11993|PTHR11993:SF10|SSF56762|TIGR01962 METD_RS06765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001268|IPR010218|IPR020396 NADH dehydrogenase, subunit C|NADH:ubiquinone oxidoreductase, 30kDa subunit|NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0008137|GO:0016651|GO:0055114 MF_01357|PD001581|PF00329|PS00542|PTHR10884|PTHR10884:SF10|SSF143243|TIGR01961 METD_RS06770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006137|IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0008137|GO:0048038|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.40.50.700|MF_01356|PF01058|PS01150|PTHR11995|PTHR11995:SF22|SSF56770|TIGR01957 METD_RS06775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000440|IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid|NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0016651|GO:0055114 MF_01394|PF00507|PTHR11058|PTHR11058:SF10 METD_RS06785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014044 CAP domain G3DSA:3.40.33.10|PF00188|PTHR31157|SSF55797 METD_RS06790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000923|IPR001235|IPR002386|IPR008972|IPR012745|IPR028871 Amicyanin/Pseudoazurin|Blue (type 1) copper domain|Blue (type 1) copper protein, binding site|Blue (type 1) copper protein, plastocyanin-type|Cupredoxin|Pseudoazurin GO:0005507|GO:0009055 G3DSA:2.60.40.420|PF00127|PR00155|PR00156|PS00196|PTHR34192|SSF49503|TIGR02375 METD_RS06795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00867|PTHR11405|PTHR11405:SF5|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 METD_RS06800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30437|SSF46557|SSF54534|TIGR01462 METD_RS06810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009367 Mitochondrial fission protein ELM1-like PF06258|PTHR33986|SSF53756 METD_RS06815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 METD_RS06820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS06825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|PTHR21272|SSF52304|TIGR01088 METD_RS06830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR001249|IPR001882|IPR011053 Acetyl-CoA biotin carboxyl carrier|Biotin-binding site|Biotin/lipoyl attachment|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00188|PTHR23151|SSF51230|TIGR00531 METD_RS06835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 METD_RS06840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004616|IPR016181 Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MF_00688|PF03588|PTHR30098|SSF55729|TIGR00667 METD_RS06845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF13305|PTHR30328|PTHR30328:SF6|SSF46689|SSF48498 METD_RS06850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025444 Protein of unknown function DUF4188 PF13826 METD_RS06855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019225 Protein of unknown function DUF2155 PF09923 METD_RS06860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 PF05071|PTHR12910|PTHR12910:SF3 METD_RS06865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000788|IPR013344|IPR013678|IPR017856|IPR029072 Integrase, N-terminal zinc-binding domain-like|Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent|YebC-like GO:0000166|GO:0004748|GO:0006260|GO:0031419|GO:0050897|GO:0055114 G3DSA:1.10.10.200|G3DSA:3.20.70.20|PF02867|PF08471|PR01183|PTHR11573|PTHR11573:SF18|SSF51998|SSF75625|TIGR02504 METD_RS06870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|SM00487|SM00490|SSF52540 METD_RS06875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002560|IPR029261 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF14690|PTHR33498|PTHR33498:SF1 METD_RS06880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|SSF46689 METD_RS06885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012337|IPR025948 HTH-like domain|Ribonuclease H-like domain GO:0003676 G3DSA:3.30.420.10|PF13276|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS06890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS06895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS06900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS06905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR32552|PTHR32552:SF26|SSF53098 METD_RS06910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 G3DSA:3.30.2140.10|PF00797|PR01543|PTHR11786|PTHR11786:SF0|SSF54001 METD_RS06925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24322|PTHR24322:SF25|SM00822|SSF51735 METD_RS06930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF12|SSF46785|SSF53850 METD_RS06935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 METD_RS06940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 METD_RS06950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR008915|IPR016483 CBS domain|Peptidase M50|Uncharacterised conserved protein UCP006404, peptidase M50/CBS GO:0004222|GO:0006508 G3DSA:3.10.580.10|PF00571|PF02163|PIRSF006404|PTHR39188|PTHR39188:SF1|SM00116|SSF54631 METD_RS06960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 METD_RS06965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF96|SSF49764 METD_RS06970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009061 Putative DNA-binding domain G3DSA:1.10.1660.10|PF13591|SSF46955 METD_RS06975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493 METD_RS06980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754 METD_RS06995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF145|SSF49764 METD_RS07000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02922|PTHR10357|PTHR10357:SF74|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 METD_RS07025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR020948 Phosphate-starvation-induced PsiE-like PF06146 METD_RS07030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PF01434|PTHR23076|PTHR23076:SF10|SSF140990 METD_RS07040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 METD_RS07045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003018|IPR003594|IPR004358|IPR011102|IPR011495|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, HWE region|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0004673|GO:0005515|GO:0016310|GO:0016772 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF07568|PF13185|PR00344|PTHR24423|PTHR24423:SF472|SM00065|SM00387|SM00911|SSF55781|SSF55874 METD_RS07050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PR00421|PS00194|PTHR10438|PTHR10438:SF266|SSF52833 METD_RS07055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005530 SPW repeat PF03779 METD_RS07060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 G3DSA:3.30.160.190|PF04800 METD_RS07065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF96|SSF49764 METD_RS07070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF145|SSF49764 METD_RS07075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001736|IPR015679|IPR025202 Phospholipase D family|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF00614|PF13091|PTHR18896|PTHR18896:SF80|SM00155|SSF56024 METD_RS07080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF145|SSF49764 METD_RS07085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF96|SSF49764 METD_RS07100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 G3DSA:3.30.160.190|PF04800|PTHR12219|PTHR12219:SF18 METD_RS07105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005530 SPW repeat PF03779 METD_RS07110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|PTHR30158|PTHR30158:SF3|SSF111369|TIGR01730 METD_RS07115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR020948 Phosphate-starvation-induced PsiE-like PF06146 METD_RS07125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41 GO:0004222|GO:0005524|GO:0006508 G3DSA:3.40.50.300|PF00004|PF01434|PS00674|PTHR23077|SM00382|SSF140990|SSF52540 METD_RS07155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009492 TniQ PF06527 METD_RS07160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PF02040|PR00758 METD_RS07165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029039 Flavoprotein-like domain G3DSA:3.40.50.360|PTHR30041|PTHR30041:SF1|SSF52218 METD_RS07175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003938|IPR013099|IPR028325 Potassium channel domain|Potassium channel, voltage-dependent, EAG/ELK/ERG|Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076|GO:0016020 G3DSA:1.10.287.70|PF07885|PR00169|PR01463|SSF81324 METD_RS07185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007353|IPR023090 Protein of unknown function DUF421|Uncharacterised domain UPF0702, alpha/beta domain G3DSA:3.30.240.20|PF04239|PTHR34582 METD_RS07190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PTHR11803|SSF55298 METD_RS07195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001155|IPR001295|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase, conserved site|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0004152|GO:0006207|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PS00912|PTHR22893|SSF51395 METD_RS07200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS07205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016090 Phospholipase A2 domain G3DSA:1.20.90.10|PF00068|SSF48619 METD_RS07210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|SSF46785|SSF53850 METD_RS07215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 METD_RS07220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF8|SSF161098 METD_RS07225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS07230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|PTHR23024:SF233|SSF53474 METD_RS07235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR014085|IPR023631 Allophanate hydrolase|Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF24|SSF75304|TIGR02713 METD_RS07240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875|PTHR30213|PTHR30213:SF2|TIGR00765 METD_RS07245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR32487|SSF51735 METD_RS07250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003018|IPR011102|IPR013655|IPR029016 GAF domain|GAF domain-like|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|PF01590|PF07536|PF08447|PTHR33121|PTHR33121:SF7|SM00065|SM00086|SM00091|SM00911|SSF55781|SSF55785|TIGR00229 METD_RS07255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24322|PTHR24322:SF540|SSF51735 METD_RS07260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010342|IPR029063 Protein of unknown function DUF938|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06080|PTHR20974|PTHR20974:SF0|SSF53335 METD_RS07265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF788|SSF53335 METD_RS07270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|PTHR30540|PTHR30540:SF36 METD_RS07275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021295 Protein of unknown function DUF2867 PF11066 METD_RS07280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003560|IPR016040 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase|NAD(P)-binding domain GO:0008667|GO:0019290|GO:0055114 G3DSA:3.40.50.720|PF13561|PR01397|SSF51735 METD_RS07290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005065|IPR029058 Alpha/Beta hydrolase fold|Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 G3DSA:3.40.50.1820|PF03403|PTHR10272|SSF53474 METD_RS07295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR31302|PTHR31302:SF7|SSF56300 METD_RS07300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009945 Protein of unknown function DUF1476 PF07345 METD_RS07310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|PTHR30565|PTHR30565:SF2|SSF47240 METD_RS07315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018721 Protein of unknown function DUF2252 G3DSA:3.90.1200.10|PF10009|PTHR39441 METD_RS07340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024442|IPR024445 ISXO2-like transposase domain|Transposase, zinc-ribbon PF12760|PF12762|SM01126 METD_RS07345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000292|IPR023271 Aquaporin-like|Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PTHR30520 METD_RS07350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000719|IPR001932|IPR008266|IPR011009 PPM-type phosphatase domain|Protein kinase domain|Protein kinase-like domain|Tyrosine-protein kinase, active site GO:0003824|GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.60.40.10|PF00069|PF13672|PS00109|PTHR24362|PTHR24362:SF160|SM00331|SM00332|SSF56112|SSF81606 METD_RS07355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR10587|PTHR10587:SF94|SSF53448 METD_RS07360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13437|PTHR32347|PTHR32347:SF12 METD_RS07375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS07380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS07385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000890|IPR025644 Aliphatic acid kinase, short-chain|Putative metallopeptidase GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|PF00871|PF14247|PR00471|PTHR21060|PTHR21060:SF11|SSF53067 METD_RS07395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016898|IPR022486|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase 2|Polyphosphate kinase 2, PA0141|Polyphosphate kinase-2-related GO:0006793|GO:0008976 G3DSA:3.40.50.300|PF03976|PIRSF028756|PTHR34383|PTHR34383:SF2|SSF52540|TIGR03707 METD_RS07400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF27|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS07405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF3|SSF111369|TIGR01730 METD_RS07410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30574|PTHR30574:SF1 METD_RS07415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007272 Sulphur transport domain PF04143|PTHR30574|PTHR30574:SF1 METD_RS07420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PR00120|PS00154|PTHR24093|PTHR24093:SF126|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 METD_RS07425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|PTHR33154:SF10|SM00418|SSF46785 METD_RS07430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005890|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Nitrate transport ATP-binding subunit C/D|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015112|GO:0015706|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF361|SM00382|SSF52540|TIGR01184 METD_RS07435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR005889 ABC transporter type 1, transmembrane domain MetI-like|Nitrate transport permease GO:0006810|GO:0015112|GO:0015706|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF7|SSF161098|TIGR01183 METD_RS07440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF10|SSF53850 METD_RS07445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004039|IPR018527|IPR023753|IPR024935 FAD/NAD(P)-binding domain|Rubredoxin domain|Rubredoxin, iron-binding site|Rubredoxin-type fold GO:0005506|GO:0016491|GO:0046872|GO:0055114 G3DSA:2.20.28.10|G3DSA:3.50.50.60|PF00301|PF07992|PR00163|PR00368|PR00411|PS00202|PTHR22912|PTHR22912:SF130|SSF51905|SSF57802 METD_RS07450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|SSF47203|SSF56645 METD_RS07455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|PTHR35368|PTHR35368:SF1|SSF82784 METD_RS07460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002078|IPR002197|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF02954|PF13185|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00065|SM00382|SSF52540|SSF55781 METD_RS07465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PTHR11019|PTHR11019:SF58|SM00342|SSF46689|SSF52317 METD_RS07470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF131|SSF52317 METD_RS07475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456|PTHR11819|PTHR11819:SF13 METD_RS07480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007436 Protein of unknown function DUF485 PF04341|PTHR38598 METD_RS07485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF25|SSF56317 METD_RS07490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF3|SSF46785|SSF53850 METD_RS07500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF6|SSF88659|SSF88946|TIGR02937 METD_RS07505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 METD_RS07510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF0|SM00382|SSF52540|SSF90123|TIGR01842 METD_RS07515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PTHR30386|PTHR30386:SF3|SSF111369|TIGR01843 METD_RS07525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR10587|PTHR10587:SF15|SSF53448 METD_RS07530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008928 Six-hairpin glycosidase-like GO:0003824 SSF48208 METD_RS07535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:2.40.50.100|PF13437|PTHR30386 METD_RS07540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 METD_RS07545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF15|SSF161098 METD_RS07550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF14|SSF53850 METD_RS07555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006091|IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02770|PF02771|PF08028|PTHR10909|PTHR10909:SF152|SSF47203|SSF56645 METD_RS07560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30011|PTHR30011:SF29|SSF51679 METD_RS07565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF3|SM00062|SSF53850|TIGR01728 METD_RS07570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 METD_RS07580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR005881|IPR010493|IPR011004 Hexapeptide repeat|Serine O-acetyltransferase|Serine acetyltransferase, N-terminal|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PTHR23416|PTHR23416:SF2|SM00971|SSF51161|TIGR01172 METD_RS07585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|PTHR24567|PTHR24567:SF37|SM00100|SSF51206 METD_RS07590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PTHR11601|PTHR11601:SF17|SSF53383|TIGR01979 METD_RS07595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028992 Hedgehog/Intein (Hint) domain G3DSA:2.170.16.10|PF13403|SSF51294 METD_RS07600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005119 LysR, substrate-binding G3DSA:3.40.190.10|PF03466|SSF53850 METD_RS07605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PTHR22912|PTHR22912:SF159|SSF51905 METD_RS07610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|PTHR34001|SSF56925 METD_RS07620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 METD_RS07630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 METD_RS07650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019613 Protein of unknown function DUF4198 PF10670 METD_RS07655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003018|IPR011102|IPR013655|IPR029016 GAF domain|GAF domain-like|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|PF01590|PF07536|PF08447|PF13426|PTHR41523|SM00065|SM00086|SM00091|SM00911|SSF55781|SSF55785|TIGR00229 METD_RS07660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009200 Protein of unknown function DUF1269, membrane associated PF06897 METD_RS07665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010354|IPR023753 FAD/NAD(P)-binding domain|Oleate hydratase GO:0006631|GO:0016491|GO:0050151|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF06100|PTHR37417|PTHR37417:SF1|SSF51905 METD_RS07670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021225 Protein of unknown function DUF2778 PF10908 METD_RS07675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|G3DSA:3.30.70.790|MF_00822|PF02814|PIRSF036402|SM00988|SSF69287|SSF69737 METD_RS07680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467|PTHR33620 METD_RS07685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002019|IPR002026|IPR008223|IPR012010 Urease, beta subunit|Urease, gamma subunit|Urease, gamma-beta subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:2.10.150.10|G3DSA:3.30.280.10|MF_00739|MF_01954|MF_01955|PD002319|PF00547|PF00699|PIRSF001225|PTHR33569|PTHR33569:SF1|SSF51278|SSF54111|TIGR00192|TIGR00193 METD_RS07690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PTHR22642|PTHR22642:SF7|SSF51338|SSF51556|TIGR01792 METD_RS07695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|PTHR31715|SSF52540|TIGR00101 METD_RS07700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774|PTHR33643|PTHR33643:SF1 METD_RS07705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000709|IPR017777|IPR028082 ABC transporter, urea, substrate-binding, UrtA|Leu/Ile/Val-binding protein|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13433|PR00337|PTHR30483|PTHR30483:SF8|SSF53822|TIGR03407 METD_RS07710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012429 Protein of unknown function DUF1624 PF07786|PTHR40407 METD_RS07715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF29|SSF56935|TIGR01783 METD_RS07720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021225 Protein of unknown function DUF2778 PF10908 METD_RS07725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032710 NTF2-like domain G3DSA:3.10.450.50|SSF54427 METD_RS07730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|SSF82784 METD_RS07735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR013767 PAS domain|PAS fold GO:0006355 G3DSA:3.30.450.20|PF00989|PTHR24423|SM00091|SSF55785|TIGR00229 METD_RS07740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003673|IPR017659|IPR023606 CoA-transferase family III|CoA-transferase family III domain|Formyl-CoA:oxalate CoA-transferase GO:0003824|GO:0008152|GO:0033608 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|MF_00742|PF02515|PTHR24023|PTHR24023:SF593|SSF89796|TIGR03253 METD_RS07745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 METD_RS07750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011766|IPR012000|IPR012001|IPR017660|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Oxalyl-CoA decarboxylase|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0008949|GO:0030976|GO:0033611|GO:0046872 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF138|SSF52467|SSF52518|TIGR03254 METD_RS07755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009880|IPR011043|IPR011044|IPR013783|IPR014756|IPR015202|IPR015916 Domain of unknown function DUF1929|Galactose oxidase, beta-propeller|Galactose oxidase/kelch, beta-propeller|Glyoxal oxidase, N-terminal|Immunoglobulin E-set|Immunoglobulin-like fold|Quinoprotein amine dehydrogenase, beta chain-like G3DSA:2.130.10.80|G3DSA:2.60.40.10|PF07250|PF09118|PTHR32208|PTHR32208:SF31|SSF50965|SSF50969|SSF81296 METD_RS07760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF3|SSF103473|TIGR04259 METD_RS07765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF3|SSF103473|TIGR04259 METD_RS07770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|SM00116|SSF54631 METD_RS07780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 METD_RS07790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003673|IPR017659|IPR023606 CoA-transferase family III|CoA-transferase family III domain|Formyl-CoA:oxalate CoA-transferase GO:0003824|GO:0008152|GO:0033608 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|MF_00742|PF02515|PTHR24023|PTHR24023:SF593|SSF89796|TIGR03253 METD_RS07795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF384|SM00345|SM00895|SSF46785|SSF48008 METD_RS07800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|SM00833|SSF52540|SSF90002 METD_RS07805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|PTHR21581|SSF56601 METD_RS07810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007197|IPR024924|IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type|7-carboxy-7-deazaguanine synthase-like|Radical SAM GO:0003824|GO:0008616|GO:0046872|GO:0051536 G3DSA:3.80.30.10|MF_00917|PF04055|PF13394|PIRSF000370|PTHR11228|PTHR11228:SF6|SSF102114|TIGR04508 METD_RS07815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SSF90123 METD_RS07825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF186|SSF51905 METD_RS07830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PIRSF006113|PTHR12589|SSF55620|TIGR03367 METD_RS07835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|PTHR11587|PTHR11587:SF3|SSF52402|TIGR00364 METD_RS07840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003737|IPR024078 N-acetylglucosaminyl phosphatidylinositol deacetylase-related|Putative deacetylase LmbE-like domain G3DSA:3.40.50.10320|PF02585|PTHR12993|PTHR12993:SF11|SSF102588 METD_RS07845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019290|IPR029044 Glycosyltransferase 2-like, prokaryotic type|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF10111|PTHR22916|SSF53448 METD_RS07865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.50.2000|SSF53756 METD_RS07870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR22916|PTHR22916:SF22|SSF53448 METD_RS07875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 METD_RS07880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000032|IPR001020 Phosphocarrier HPr protein-like|Phosphotransferase system, HPr histidine phosphorylation site G3DSA:3.30.1340.10|PF00381|PR00107|PS00369|PTHR33705|PTHR33705:SF2|SSF55594|TIGR01003 METD_RS07885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|PTHR33799|SSF53062 METD_RS07890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011104|IPR027417 HPr kinase/phosphorylase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 G3DSA:3.40.50.300|PF07475|SSF53795 METD_RS07895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR025908|IPR025919 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Sensor N-terminal transmembrane domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Stimulus-sensing domain GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF13755|PF13756|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF47384|SSF55874 METD_RS07900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF476|SM00448|SM00862|SSF52172 METD_RS07905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012349|IPR019595 Domain of unknown function DUF2470|FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|G3DSA:3.20.180.10|PF10615|PF13883|PTHR13343|PTHR13343:SF4|SSF50475 METD_RS07910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|PTHR23115|PTHR23115:SF175|SM00838|SSF52540|SSF54980|TIGR00231|TIGR01393 METD_RS07915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF3|SSF111369|TIGR01730 METD_RS07920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF12|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS07930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601 METD_RS07935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|PF00700|SSF64518 METD_RS07940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 PF00669|PF00700|SSF64518 METD_RS07945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009967 Flagellum biosynthesis repressor FlbT GO:0006402|GO:0048027|GO:1902209 PF07378 METD_RS07950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022037 Protein of unknown function DUF3606 PF12244 METD_RS07955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757 METD_RS07960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|PF13487|SM00471|SSF109604 METD_RS07965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR37827 METD_RS07970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005939|IPR029021 Beta-lactamase hydrolase-like|Protein-tyrosine phosphatase-like GO:0016787 G3DSA:3.90.190.10|PF04273|SSF52799|TIGR01244 METD_RS07975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PTHR10804|PTHR10804:SF41|SSF55920|TIGR00500 METD_RS07980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729|PTHR34989|PTHR34989:SF1 METD_RS07985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 METD_RS07990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853|PTHR37418 METD_RS07995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF11|SM00382|SM00448|SSF46689|SSF52172|SSF52540 METD_RS08000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358|IPR017055|IPR029151|IPR033479 Double Cache domain 1|Histidine kinase-like ATPase, C-terminal domain|Periplasmic sensor domain-like|Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator)|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF02743|PIRSF036431|PR00344|PTHR24423|PTHR24423:SF451|SM00387|SM00388|SSF103190|SSF47384|SSF55874 METD_RS08005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF10|SM00382|SSF52540 METD_RS08010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF8|SSF161098 METD_RS08015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF1|SSF53850 METD_RS08020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005526|IPR013033|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal GO:0000902|GO:0000917|GO:0051726 G3DSA:2.160.20.70|MF_00267|PF03775|PTHR34108|PTHR34108:SF1|SSF63848|TIGR01222 METD_RS08025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018723 Protein of unknown function DUF2254, membrane PF10011 METD_RS08030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SM00838|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 METD_RS08035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR007891 CHASE3|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF05227|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS08040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005526|IPR013033|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal GO:0000902|GO:0000917|GO:0051726 G3DSA:2.160.20.70|MF_00267|PF03775|PTHR34108|PTHR34108:SF1|SSF63848|TIGR01222 METD_RS08045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR010223|IPR025501|IPR027417 ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0000918|GO:0016887 G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF1|SSF52540|TIGR01968 METD_RS08050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 G3DSA:3.30.1070.10|MF_00262|PF03776|PTHR33404|SSF55229|TIGR01215 METD_RS08055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|PTHR24305|PTHR24305:SF21|SSF48264 METD_RS08060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005511|IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Senescence marker protein-30 (SMP-30)|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PR01790|PTHR10907|PTHR10907:SF47|SSF63829 METD_RS08065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008928|IPR011613|IPR012341 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF00723|PTHR31616|PTHR31616:SF0|SSF48208 METD_RS08070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251|IPR019945|IPR023907 F420-dependent glucose-6-phosphate dehydrogenase-related|Luciferase-like domain|Non-F420 flavinoid oxidoreductase GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30011|PTHR30011:SF27|SSF51679|TIGR03557|TIGR03885 METD_RS08075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966|PTHR37944 METD_RS08085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF22|SSF53850 METD_RS08090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 METD_RS08095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF10|SSF161098 METD_RS08100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF336|SM00382|SSF52540|TIGR01727 METD_RS08105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF535|SM00382|SSF52540|TIGR01727 METD_RS08110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010061|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF188|SSF53720|TIGR01722 METD_RS08115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010419|IPR023393 Carbon monoxide dehydrogenase subunit G|START-like domain G3DSA:3.30.530.20|PF06240|PTHR38588|PTHR38588:SF1|SSF55961 METD_RS08120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF469|SM00382|SSF52540 METD_RS08125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PTHR24220|PTHR24220:SF491|SM00382|SSF52540 METD_RS08130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF8 METD_RS08135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF379 METD_RS08140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF17|SSF53822 METD_RS08145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF76|SM01008|SSF54665|SSF56003 METD_RS08150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|SSF47741|SSF54292 METD_RS08155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PTHR11908|PTHR11908:SF70|SM01092|SSF55447|SSF56176 METD_RS08160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF11|SSF46689 METD_RS08165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002933|IPR010158|IPR011650 Amidase, hydantoinase/carbamoylase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF001235|PTHR32494|PTHR32494:SF9|SSF53187|SSF55031|TIGR01879 METD_RS08170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF80|SSF53383 METD_RS08180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015590|IPR016161|IPR016162 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.605.10|PF00171|PTHR11699|PTHR11699:SF188|SSF53720 METD_RS08185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PTHR30537|PTHR30537:SF16|SSF53850 METD_RS08195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540 METD_RS08200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001905|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PTHR11730|PTHR11730:SF17|SSF111352|TIGR00836 METD_RS08205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004937|IPR017807|IPR029020 Ammonium/urea transporter|Urea transporter|Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 G3DSA:1.10.3430.10|PF03253|PIRSF016502|PTHR10464|TIGR03441 METD_RS08210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774|PTHR33643|PTHR33643:SF1 METD_RS08215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|PTHR31715|SSF52540|TIGR00101 METD_RS08220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467|PTHR33620 METD_RS08225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|MF_00822|PF02814|PF05194|PIRSF036402|SM00988|SSF69287 METD_RS08230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259 METD_RS08235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259 METD_RS08240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PS01120|PTHR22642|PTHR22642:SF7|SSF51338|SSF51556|TIGR01792 METD_RS08245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002019 Urease, beta subunit G3DSA:2.10.150.10|MF_01954|PF00699|PTHR33569|PTHR33569:SF1|SSF51278|TIGR00192 METD_RS08250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002026|IPR012010 Urease, gamma subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:3.30.280.10|PD002319|PF00547|PIRSF001223|PTHR33569|PTHR33569:SF1|SSF54111|TIGR00193 METD_RS08255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 METD_RS08260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019613 Protein of unknown function DUF4198 PF10670 METD_RS08265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13515 METD_RS08270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30007|PTHR30007:SF17 METD_RS08280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119|IPR009057 Homeodomain-like|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PF13384|PTHR30461|PTHR30461:SF9|SM00857|SSF46689|SSF53041 METD_RS08285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017961|IPR025188 DNA polymerase, Y-family, little finger domain|Domain of unknown function DUF4113 GO:0003684|GO:0006281 PF11799|PF13438|PTHR11076|PTHR11076:SF40 METD_RS08295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003595|IPR005502|IPR022778|IPR029021 ADP-ribosylation/Crystallin J1|CDKN3 domain|Protein-tyrosine phosphatase, catalytic|Protein-tyrosine phosphatase-like GO:0004721|GO:0004725 G3DSA:3.90.190.10|PF03747|PF05706|PTHR16222|PTHR16222:SF12|SM00404|SSF101478|SSF52799 METD_RS08315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PF03979 METD_RS08320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS08325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS08340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF01966|PTHR35569|PTHR35569:SF1|SSF109604 METD_RS08345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PTHR11019|PTHR11019:SF58|SM00342|SSF46689|SSF52317 METD_RS08350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022270 Beta-carotene 15,15'-monooxygenase, Brp/Blh family GO:0016702|GO:0055114 PF15461|TIGR03753 METD_RS08365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SSF47384|SSF55874 METD_RS08370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006153|IPR018422 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR10110|PTHR10110:SF86 METD_RS08380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS08385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS08390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|SM00421|SSF46894 METD_RS08395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR24559|PTHR24559:SF185|SSF53098 METD_RS08400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS08410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 METD_RS08415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|SSF50022 METD_RS08420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013320|IPR029062 Class I glutamine amidotransferase-like|Concanavalin A-like lectin/glucanase domain G3DSA:2.60.120.200|PF13385|SSF49899|SSF52317 METD_RS08430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017780|IPR027417 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtE|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF404|SM00382|SSF52540|TIGR03410 METD_RS08435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017781|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtD|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF366|SM00382|SSF52540|TIGR03411 METD_RS08440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR017778 ABC transporter, permease|ABC transporter, urea, permease protein, UrtC GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|TIGR03408 METD_RS08445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR017779 ABC transporter, permease|ABC transporter, urea permease protein UrtB, bacterial-type GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF349|TIGR03409 METD_RS08450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|PTHR30483|PTHR30483:SF8|SSF53822 METD_RS08460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 METD_RS08470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|PTHR19328|SSF50952 METD_RS08475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|SSF53474 METD_RS08485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009936 Protein of unknown function DUF1468 PF07331 METD_RS08490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002823 Protein of unknown function DUF112, transmembrane PF01970|PTHR35342|PTHR35342:SF2 METD_RS08495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005064 Bordetella uptake gene GO:0030288 PF03401|PIRSF017082|PTHR30349|PTHR30349:SF1|SSF53850 METD_RS08500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24322|SSF51735 METD_RS08505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PIRSF000709|PS00175|PTHR11931|PTHR11931:SF0|SM00855|SSF53254|TIGR01258 METD_RS08510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010708|IPR023214 5'(3')-deoxyribonucleotidase|HAD-like domain GO:0008253|GO:0009264 G3DSA:3.40.50.1000|PF06941|SSF56784 METD_RS08535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 METD_RS08550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002168|IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3|Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PS01173|PTHR23024|PTHR23024:SF47|SSF53474 METD_RS08560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|PTHR24291|PTHR24291:SF46|SSF48264 METD_RS08565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013656|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08448|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 METD_RS08570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035|IPR010607 Protein of unknown function DUF1194|von Willebrand factor, type A G3DSA:3.40.50.410|PF06707|SSF53300 METD_RS08575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF2|SSF143631 METD_RS08580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007329|IPR011399|IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain|FMN-binding|Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0010181|GO:0016020|GO:0045893 PF04205|PF12801|PIRSF036354|PTHR30224|PTHR30224:SF4|SM00900|SSF54862 METD_RS08585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011045|IPR011964|IPR015943|IPR019405|IPR022456 Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|PQQ-dependent catabolism-associated beta-propeller protein|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF10282|PTHR13833|SSF50974|TIGR02276|TIGR03866 METD_RS08590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022478|IPR028081|IPR028082 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system|Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822|TIGR03863 METD_RS08595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR030991 Cytochrome c-550 PedF|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626|TIGR04494 METD_RS08600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850 METD_RS08605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001479|IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily|Quinoprotein dehydrogenase, conserved site GO:0005509|GO:0016020|GO:0016614|GO:0030288|GO:0055114 G3DSA:2.140.10.10|PF01011|PF13360|PS00364|PTHR32303|PTHR32303:SF2|SM00564|SSF50998|TIGR03075 METD_RS08610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF73|SSF103473 METD_RS08620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009218 Predicted HD phosphohydrolase PIRSF035170|PTHR21174|SSF109604 METD_RS08650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR10120|PTHR10120:SF19 METD_RS08665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SM00822|SSF51735 METD_RS08670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF1|SSF46785|SSF53850 METD_RS08675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853|PTHR37418|PTHR37418:SF2 METD_RS08680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS08685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR37823|SSF46626 METD_RS08690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS08695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24222|PTHR24222:SF30|SM00382|SSF52540|SSF90123 METD_RS08700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF161|SM00382|SSF52540|SSF90123 METD_RS08705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PTHR30365|PTHR30365:SF0 METD_RS08710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|PTHR30365|PTHR30365:SF6|TIGR00203 METD_RS08720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001034|IPR011991|IPR014036|IPR018356 DeoR C-terminal sensor domain|DeoR-type HTH domain|Transcription regulator, HTH DeoR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.1360|PF00455|PF08220|PR00037|PS00894|PTHR30363|PTHR30363:SF1|SM00420|SM01134|SSF100950|SSF46785 METD_RS08725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF8|SSF75304 METD_RS08730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS08735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR031485 Cellulose biosynthesis protein BcsS PF17036 METD_RS08740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR003919|IPR005150|IPR029044 Cellulose synthase|Cellulose synthase, subunit A|Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases GO:0006011|GO:0016020|GO:0016759|GO:0016760|GO:0030244|GO:0035438 G3DSA:3.90.550.10|PF00535|PF03552|PR01439|PTHR10587|PTHR10587:SF94|SSF53448|TIGR03030 METD_RS08745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 PF03170 METD_RS08750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002037|IPR008928|IPR012341 Glycoside hydrolase, family 8|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824|GO:0004553|GO:0005975 G3DSA:1.50.10.10|PF01270|PR00735|SSF48208 METD_RS08755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 METD_RS08805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR011990|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.2000|PF00534|PF13439|PF13524|PTHR12526|SSF48452|SSF53756 METD_RS08810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 METD_RS08815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027383 Putative zinc-finger PF13490 METD_RS08820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 METD_RS08825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|PTHR41533|PTHR41533:SF1|SSF141523|SSF47090 METD_RS08835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007410|IPR012533|IPR021174 DR1885-like metal-binding protein|GLE1, N-terminal, bacteria|Uncharacterised conserved protein UCP037139 PF04314|PF07987|PIRSF037139|PTHR36302|PTHR36302:SF1|SSF110087 METD_RS08840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007410 DR1885-like metal-binding protein PF04314|PTHR36302|PTHR36302:SF1|SSF110087 METD_RS08845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|PTHR12151|SSF52833 METD_RS08855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 METD_RS08860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029030|IPR029058 Alpha/Beta hydrolase fold|Caspase-like domain G3DSA:3.40.50.1460|G3DSA:3.40.50.1820|PF00656|PTHR31773|PTHR31773:SF9|SSF52129 METD_RS08865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966|PTHR37944|PTHR37944:SF2 METD_RS08870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF356|SM00345|SM00895|SSF46785|SSF48008 METD_RS08875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376|PTHR33376:SF2 METD_RS08880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF2 METD_RS08885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF6|TIGR00786 METD_RS08900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001216|IPR001926 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|PTHR10314|PTHR10314:SF83|SSF53686 METD_RS08905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR009003 Peptidase S1, PA clan|Peptidoglycan binding-like G3DSA:1.10.101.10|SSF47090|SSF50494 METD_RS08910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657|PTHR34821|PTHR34821:SF2 METD_RS08915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001599|IPR002890|IPR008930|IPR011625|IPR011990|IPR021868|IPR026284 Alpha-2-macroglobulin|Alpha-2-macroglobulin MG1 domain|Alpha-2-macroglobulin domain protein, bacteria|Alpha-2-macroglobulin, N-terminal|Alpha-2-macroglobulin, N-terminal 2|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid|Tetratricopeptide-like helical domain GO:0004866|GO:0005515 G3DSA:1.25.40.10|G3DSA:1.50.10.20|PF00207|PF01835|PF07703|PF11974|PIRSF038980|PTHR40094|PTHR40094:SF1|SM01359|SM01360|SSF48239 METD_RS08920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR001460|IPR009647|IPR011815|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1C|Penicillin-binding protein, transpeptidase|Penicillin-binding, C-terminal GO:0008658|GO:0008955|GO:0009252 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF06832|PTHR32282|PTHR32282:SF0|SSF53955|SSF56601|TIGR02073 METD_RS08925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|PTHR30561|PTHR30561:SF0|SSF103481 METD_RS08930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|SM00530|SSF47413 METD_RS08935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005754|IPR022445|IPR023365 Sortase domain|Sortase family|Sortase, proteobacterial type G3DSA:2.40.260.10|PF04203|PTHR33393|PTHR33393:SF5|SSF63817|TIGR03784 METD_RS08940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035|IPR013694|IPR022440 Conserved hypothetical protein CHP03788|VIT domain|von Willebrand factor, type A G3DSA:3.40.50.410|PF08487|PF13768|PTHR10338|PTHR10338:SF95|SM00327|SM00609|SSF53300|TIGR03788 METD_RS08945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR23029|PTHR23029:SF7|SM00855|SSF53254 METD_RS08955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 PF03824|PTHR40659 METD_RS08960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010412|IPR018247 EF-Hand 1, calcium-binding site|Protein of unknown function DUF1007 PF06226|PS00018 METD_RS08965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005616 CcmH/CycL/Ccl2/NrfF family PF03918|PTHR30009 METD_RS08970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002541|IPR003567|IPR003568|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410|PR01411|PTHR30009|PTHR30009:SF0|TIGR00353 METD_RS08975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004329|IPR012340 CcmE/CycJ protein|Nucleic acid-binding, OB-fold GO:0005886|GO:0017003|GO:0017004 G3DSA:2.40.50.140|MF_01959|PF03100|PTHR34128|PTHR34128:SF1|SSF82093 METD_RS08980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR017560|IPR019734 Cytochrome c-type biogenesis protein CcmI|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452|TIGR03142 METD_RS08985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF496|SM00387|SSF47384|SSF55874 METD_RS08990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011660 Rv0623-like transcription factor PF07704 METD_RS08995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF316|SM00448|SM00862|SSF46894|SSF52172 METD_RS09020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002196|IPR023346|IPR023347 Glycoside hydrolase, family 24|Lysozyme domain|Lysozyme-like domain GO:0003796|GO:0009253|GO:0016998 G3DSA:1.10.530.40|PF00959|PTHR38107|PTHR38107:SF2|SSF53955 METD_RS09035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017853|IPR025195|IPR032876 GTA TIM-barrel-like domain|Glycoside hydrolase superfamily|Tip attachment protein J PF13547|PF13550|SSF51445 METD_RS09040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000064|IPR011929 Endopeptidase, NLPC/P60 domain|NlpC/P60 family, putative phage cell wall peptidase G3DSA:3.90.1720.10|SSF54001|TIGR02219 METD_RS09045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011928|IPR018964|IPR019228 Bacteriophage phiJL001, Gp84|Bacteriophage phiJL001, Gp84, C-terminal|Bacteriophage phiJL001, Gp84, N-terminal PF09356|PF09931|TIGR02218 METD_RS09050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011740 Protein of unknown function DUF2460 PF09343|TIGR02217 METD_RS09060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019056 Phage tail assembly chaperone protein, TAC6 PF09550 METD_RS09065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021791 Phage tail tube protein, GTA-gp10 PF11836 METD_RS09070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011855|IPR022344 Gene transfer agent, major tail protein|Phage major tail protein TP901-1 PF06199|PR01996|TIGR02126 METD_RS09075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021508 Protein of unknown function DUF3168 PF11367 METD_RS09080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008767 Bacteriophage SPP1, head-tail adaptor PF05521 METD_RS09085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011738 Phage conserved hypothetical protein TIGR02215 METD_RS09090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001254|IPR001314|IPR009003|IPR018114|IPR033116 Peptidase S1, PA clan|Peptidase S1A, chymotrypsin family|Serine proteases, trypsin domain|Serine proteases, trypsin family, histidine active site|Serine proteases, trypsin family, serine active site GO:0004252|GO:0006508 G3DSA:2.40.10.10|PF00089|PR00722|PS00134|PS00135|SM00020|SSF50494 METD_RS09095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001254|IPR001314|IPR009003|IPR018114|IPR033116 Peptidase S1, PA clan|Peptidase S1A, chymotrypsin family|Serine proteases, trypsin domain|Serine proteases, trypsin family, histidine active site|Serine proteases, trypsin family, serine active site GO:0004252|GO:0006508 G3DSA:2.40.10.10|PF00089|PR00722|PS00134|PS00135|PTHR24276|PTHR24276:SF49|SM00020|SSF50494 METD_RS09100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006444|IPR024455 Phage capsid|Phage major capsid protein, HK97 PF05065|SSF56563|TIGR01554 METD_RS09105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006433 Prohead protease G3DSA:3.20.16.10|PF04586|SSF50789|TIGR01543 METD_RS09110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006427|IPR006944 Bacteriophage/Gene transfer agent portal protein|Phage portal protein, HK97 PF04860|TIGR01537 METD_RS09115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004921 Terminase, large subunit PF03237 METD_RS09125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR006363|IPR014776|IPR014777 Precorrin-3B C17-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PTHR21091|PTHR21091:SF9|SSF53790|TIGR01466 METD_RS09130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR003043|IPR006364|IPR012382|IPR014777 Precorrin-2 C(20)-methyltransferase|Precorrin-2 C(20)-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0008757|GO:0009236|GO:0030788|GO:0055114 G3DSA:3.40.1010.10|PF00590|PIRSF036427|PS00840|PTHR21091|PTHR21091:SF127|SSF53790|TIGR01467 METD_RS09135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 G3DSA:3.40.50.10230|PF02570|PTHR32439|SSF63965 METD_RS09140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005117|IPR006066|IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF03460|PS00365|PTHR32439|PTHR32439:SF3|SSF55124|SSF56014|TIGR02435 METD_RS09145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003672 CobN/magnesium chelatase GO:0009058 PF02514|PTHR23304|PTHR23304:SF96 METD_RS09150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025645 Domain of unknown function DUF4349 PF14257 METD_RS09155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR011629|IPR012824|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0009236 G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF10|SSF52540|SSF90002|TIGR02475 METD_RS09160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336|IPR012863 Protein of unknown function DUF1636|Thioredoxin-like fold PF07845|SSF52833 METD_RS09165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012666 Cobalt transporter subunit CbtA, putative PF09490|TIGR02458 METD_RS09170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012667 Cobalt transporter subunit CbtB, putative PF09489|TIGR02459 METD_RS09175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013901 Protein of unknown function DUF1772 PF08592|PTHR36535 METD_RS09180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PTHR33164|SM00347|SSF46785 METD_RS09185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003203|IPR027417 Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0009236|GO:0043752|GO:0051188 G3DSA:3.40.50.300|PF02283|PIRSF006135|PTHR34848|SSF52540 METD_RS09190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003724|IPR025826|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|Cob(I)alamin adenosyltransferase N-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PF12557|PIRSF015617|PTHR30069|SSF52540|TIGR00708 METD_RS09195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF1|SSF48557|TIGR00979 METD_RS09200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014826|IPR020568 Formaldehyde-activating enzyme|Ribosomal protein S5 domain 2-type fold GO:0016051|GO:0016840 G3DSA:3.30.230.60|PF08714|PTHR35039|PTHR35039:SF1|SSF54211|TIGR03126 METD_RS09215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF12697|PR00111|PR00412|PTHR10992|PTHR10992:SF877|SSF53474 METD_RS09220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS09225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS09230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR32322|PTHR32322:SF8|SSF103481 METD_RS09235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR018060|IPR018062|IPR020449 DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PR00032|PS00041|PTHR11019|PTHR11019:SF105|SM00342|SSF46689 METD_RS09240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029062 Class I glutamine amidotransferase-like G3DSA:3.40.50.880|PTHR37947|SSF52317 METD_RS09245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011933|IPR024163|IPR025297|IPR029062 Aerotolerance regulator, N-terminal|Class I glutamine amidotransferase-like|Domain of unknown function DUF4159|Double transmembrane domain PF07584|PF13709|SSF52317|TIGR02226 METD_RS09250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR33608|PTHR33608:SF2 METD_RS09255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF156|SSF52540 METD_RS09260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637 METD_RS09265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010707|IPR023361 Protein of unknown function DUF1285|Protein of unknown function DUF1285, beta-roll domain G3DSA:2.20.70.10|G3DSA:2.30.270.10|G3DSA:3.10.540.10|PF06938|PIRSF029557 METD_RS09270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000059|IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016787|GO:0016818|GO:0030145 G3DSA:3.90.79.10|PF00293|PS01293|PTHR12992|SSF55811 METD_RS09280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002646|IPR032828 Poly A polymerase, head domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|PF01743|PF12627|PTHR13734|SSF81301|SSF81891 METD_RS09285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001469|IPR020546 ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:2.60.15.10|MF_00530|PD000944|PF02823|PTHR13822|SSF51344|TIGR01216 METD_RS09295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PIRSF039072|PS00152|PTHR15184|PTHR15184:SF44|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 METD_RS09300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000131|IPR023632|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PIRSF039089|PR00126|PS00153|PTHR11693|SSF52943|TIGR01146 METD_RS09305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962 METD_RS09310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000711|IPR020781|IPR026015 ATPase, OSCP/delta subunit|ATPase, OSCP/delta subunit, conserved site|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0016020|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PS00389|PTHR11910|PTHR11910:SF1|SSF47928|TIGR01145 METD_RS09315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|PTHR11108|SSF53800|TIGR00109 METD_RS09320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|PTHR10108|PTHR10108:SF739|SSF53335 METD_RS09325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR006179|IPR008334|IPR029052 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF00149|PF02872|PR01607|PTHR11575|SSF55816|SSF56300 METD_RS09330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002043|IPR005122|IPR018085 Uracil-DNA glycosylase|Uracil-DNA glycosylase, active site|Uracil-DNA glycosylase-like GO:0004844|GO:0006281|GO:0006284|GO:0016799 G3DSA:3.40.470.10|MF_00148|PF03167|PS00130|PTHR11264|SM00986|SM00987|SSF52141|TIGR00628 METD_RS09335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001763|IPR018634 Chromate resistance exported protein|Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PF09828|SM00450|SSF52821 METD_RS09340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003370|IPR014047 Chromate transporter|Chromate transporter, long chain GO:0015109|GO:0015703 PF02417|PIRSF004810|PTHR33567|PTHR33567:SF1|TIGR00937 METD_RS09350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:3.10.50.40|PF13616|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 METD_RS09355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 METD_RS09360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001466|IPR001586|IPR012338 Beta-lactamase, class-C active site|Beta-lactamase-related|Beta-lactamase/transpeptidase-like GO:0008800|GO:0017001|GO:0030288 G3DSA:3.40.710.10|PF00144|PS00336|PTHR22935|PTHR22935:SF64|SSF56601 METD_RS09365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|SSF56214 METD_RS09370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|SSF55811 METD_RS09375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576 G3DSA:3.40.50.1820|PF10503|PTHR10655|PTHR10655:SF33|SSF53474|TIGR01840 METD_RS09380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010985 Ribbon-helix-helix GO:0006355 SSF47598 METD_RS09385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006054|IPR006309|IPR012337|IPR013520 DNA polymerase 3, epsilon subunit|DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|PTHR30231|PTHR30231:SF0|SM00479|SSF53098|TIGR00573|TIGR01406 METD_RS09390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 METD_RS09395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006151|IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|PTHR21089|SSF51735|SSF53223|TIGR00507 METD_RS09400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|PTHR11562|PTHR11562:SF17|SSF160240|SSF161111|TIGR01297 METD_RS09405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 METD_RS09410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 PF04577 METD_RS09415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005177|IPR026565 Bifunctional kinase-pyrophosphorylase|Putative pyruvate, phosphate dikinase regulatory protein GO:0005524|GO:0016772 MF_00921|PF03618|PTHR31756|PTHR31756:SF3 METD_RS09420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000257|IPR006361 Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PTHR21091|PTHR21091:SF2|SSF51726|TIGR01464 METD_RS09425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR22769|PTHR22769:SF5|SSF55811 METD_RS09430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005265 Uncharacterised protein family UPF0093 PF03653|PIRSF004638|PTHR40255 METD_RS09435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR37549|PTHR37549:SF1 METD_RS09440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001348|IPR013820|IPR018198|IPR020621 ATP phosphoribosyltransferase HisG|ATP phosphoribosyltransferase HisG, long form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_00079|PF01634|PS01316|PTHR21403|PTHR21403:SF0|SSF53850|TIGR00070 METD_RS09445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 G3DSA:3.30.930.10|PF13393|PTHR11476|PTHR11476:SF5|SSF55681 METD_RS09450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006356|IPR006357|IPR023214|IPR023215 HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|HAD-superfamily hydrolase, subfamily IIA, hypothetical 3|Nitrophenylphosphatase-like domain G3DSA:3.40.50.1000|G3DSA:3.40.50.10410|PF13242|PF13344|PTHR19288|PTHR19288:SF3|SSF56784|TIGR01459|TIGR01460 METD_RS09455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|PTHR30055|PTHR30055:SF23|SSF46689|SSF48498 METD_RS09460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR002123|IPR011701|IPR020845|IPR020846 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Major facilitator superfamily|Major facilitator superfamily domain|Phospholipid/glycerol acyltransferase GO:0003824|GO:0008152|GO:0016021|GO:0016746|GO:0055085 G3DSA:1.20.1250.20|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.1130.10|G3DSA:3.40.50.980|PF00501|PF01553|PF07690|PS00455|PTHR24096|PTHR24096:SF177|SM00563|SSF103473|SSF56801|SSF69593 METD_RS09465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009387 Toxin HigB-2 PF06296|PIRSF018634 METD_RS09470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|PTHR36511|PTHR36511:SF3|SM00530|SSF47413 METD_RS09475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|PTHR13887|PTHR13887:SF25|SSF52833 METD_RS09480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003251|IPR009078|IPR012347|IPR017040|IPR020846 Ferritin-like superfamily|Ferritin-related|Major facilitator superfamily domain|Rubrerythrin|Uncharacterised conserved protein UCP035918 , rubrerythrin/DUF125-related GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|PF02915|PIRSF035918|PTHR33531|PTHR33531:SF4|SSF103473|SSF47240 METD_RS09485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PF14602|PTHR13061|SSF51161 METD_RS09490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 G3DSA:3.90.1170.40|PF02391|PTHR23404|PTHR23404:SF2|SSF54690 METD_RS09495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF7 METD_RS09500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006231|IPR023753 FAD/NAD(P)-binding domain|Malate:quinone-oxidoreductase GO:0006099|GO:0008924|GO:0016491|GO:0055114 G3DSA:3.50.50.60|MF_00212|PF06039|PTHR13847|PTHR13847:SF214|SSF51905|TIGR01320 METD_RS09505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035|IPR008912 Uncharacterised protein family CoxE-like|von Willebrand factor, type A PF05762|PTHR30634|PTHR30634:SF8|SM00327|SSF53300 METD_RS09510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30634|PTHR30634:SF10 METD_RS09515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011704|IPR027417 ATPase, dynein-related, AAA domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PTHR22908|PTHR22908:SF67|SSF52540 METD_RS09525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007527 Zinc finger, SWIM-type GO:0008270 PF04434 METD_RS09530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 METD_RS09535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010985|IPR022789 Antitoxin ParD|Ribbon-helix-helix GO:0006355 PF03693|PTHR36582|PTHR36582:SF2|SSF47598|TIGR02606 METD_RS09540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007712|IPR028344 Toxin-antitoxin system, RelE/ParE toxin family|Toxin-antitoxin system, toxin component ParE1/4 PF05016|PIRSF029218|PTHR33755|PTHR33755:SF3 METD_RS09545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR42160|PTHR42160:SF1|SM00986|SM00987|SSF52141 METD_RS09555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001754|IPR011060|IPR013785|IPR014732|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0044205 G3DSA:3.20.20.70|MF_01200_B|PF00215|PS00156|PTHR32119|PTHR32119:SF2|SM00934|SSF51366|TIGR01740 METD_RS09560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010753|IPR011008 Dimeric alpha-beta barrel|Domain of unknown function DUF1330 G3DSA:3.30.70.900|PF07045|PTHR41521|SSF54909 METD_RS09565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|PTHR30055:SF60|SSF46689|SSF48498 METD_RS09575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008180|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0016787|GO:0046080 G3DSA:2.70.40.10|PF00692|PTHR11241|SSF51283 METD_RS09580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007362 Protein of unknown function DUF429 PF04250 METD_RS09585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|SSF55811 METD_RS09590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00705|PTHR11002|SM00947|SSF53056 METD_RS09595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000760 Inositol monophosphatase GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PTHR20854|PTHR20854:SF5|SSF56655 METD_RS09600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018762 Histidine phosphotransferase PF10090 METD_RS09605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR011006 CheW-like domain|CheY-like superfamily|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF6|SM00073|SM00260|SM00387|SM00448|SM01231|SSF47226|SSF47384|SSF50341|SSF52172|SSF55874 METD_RS09610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PF01584|PTHR22617|SM00260|SSF50341 METD_RS09615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS09620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF16|SM00448|SSF52172|SSF52738 METD_RS09625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000780|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PR00996|PTHR24422|PTHR24422:SF9|SM00138|SSF47757|SSF53335 METD_RS09630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003833|IPR010016|IPR024946|IPR029000 Arginine repressor C-terminal-like domain|Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain|KipI family G3DSA:2.40.100.10|G3DSA:3.30.1360.40|PF02682|PTHR34698|PTHR34698:SF2|SM00796|SSF160467|SSF50891|TIGR00370 METD_RS09635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003778|IPR029000 Carboxyltransferase domain, subdomain A and B|Cyclophilin-like domain G3DSA:2.40.100.10|PF02626|PTHR18866|PTHR18866:SF74|SM00797|SSF50891|TIGR00724 METD_RS09640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004601|IPR013022 UV-endonuclease UvdE|Xylose isomerase-like, TIM barrel domain GO:0004519|GO:0006289|GO:0009411 PF03851|PTHR31290|PTHR31290:SF6|SSF51658 METD_RS09645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012683 Conserved hypothetical protein CHP02302, transmembrane PF13779|TIGR02302 METD_RS09650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007667 Hypoxia induced protein, domain PF04588 METD_RS09655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024311 Lipocalin-like domain PF13924 METD_RS09660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR018550 Lipid A 3-O-deacylase-related|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF09411 METD_RS09665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016030|IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type|Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like G3DSA:1.20.1200.10|PD007457|PF01923|PTHR12213|SSF89028|TIGR00636 METD_RS09670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000049|IPR012255|IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Electron transfer flavoprotein, beta subunit|Electron transfer flavoprotein, beta-subunit, conserved site|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055 G3DSA:3.40.50.620|PF01012|PIRSF000090|PS01065|PTHR21294|PTHR21294:SF8|SM00893|SSF52402 METD_RS09675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001308|IPR014729|IPR014730|IPR014731|IPR018206|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein alpha subunit/FixB|Electron transfer flavoprotein subunit alpha, conserved site|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0009055|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|PIRSF000089|PS00696|PTHR10909|PTHR10909:SF294|SM00893|SSF52402|SSF52467 METD_RS09680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040|IPR022694 3-hydroxyacyl-CoA dehydrogenase|3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0003857|GO:0006631|GO:0016491|GO:0055114|GO:0070403 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00725|PF02737|PIRSF000105|PS00067|PTHR23309|SSF48179|SSF51735 METD_RS09690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR014189|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase PIG3 GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF610|SM00829|SSF50129|SSF51735|TIGR02824 METD_RS09700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005765|IPR029057 Phosphoribosyltransferase-like|Uracil phosphoribosyl transferase GO:0004845|GO:0006223 G3DSA:3.40.50.2020|MF_01218_B|PF14681|PTHR10285|SSF53271|TIGR01091 METD_RS09705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF02922|PTHR10357|PTHR10357:SF74|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 METD_RS09710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 G3DSA:3.40.50.2000|PF00982|PTHR10788|PTHR10788:SF6|SSF53756 METD_RS09720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009937|IPR011527 ABC transporter type 1, transmembrane domain|Putative Actinobacterial Holin-X, holin superfamily III GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 PF07332|SSF90123 METD_RS09725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022062 Protein of unknown function DUF3618 PF12277 METD_RS09730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010279 Protein of unknown function DUF883, ElaB G3DSA:1.20.120.20|PF05957|SSF58113 METD_RS09735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF1|SSF52954|SSF55681|TIGR00442 METD_RS09740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002547|IPR008231|IPR012340 Nucleic acid-binding, OB-fold|Probable chaperone CsaA|tRNA-binding domain GO:0000049 G3DSA:2.40.50.140|PF01588|PTHR11586|SSF50249|TIGR02222 METD_RS09745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021836 Protein of unknown function DUF3429 PF11911 METD_RS09750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23539|PTHR23539:SF1|SSF103473 METD_RS09755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|PTHR36918|PTHR36918:SF1|SSF54611|TIGR00809 METD_RS09760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007379|IPR016985|IPR032710 NTF2-like domain|Tim44-like domain|Uncharacterised conserved protein UCP031890, Tim44-related PD111165|PF04280|PIRSF031890|PTHR10721|PTHR10721:SF2|SM00978|SSF54427 METD_RS09765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005300|IPR009009|IPR010611|IPR026044 3D domain|Lytic transglycosylase MltA|Membrane-bound lytic murein transglycosylase A|RlpA-like protein, double-psi beta-barrel domain GO:0004553|GO:0009254|GO:0019867 G3DSA:2.40.40.10|PF03562|PF06725|PIRSF019422|PTHR30124|PTHR30124:SF0|SM00925|SSF50685 METD_RS09770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002625 Smr domain PF01713|PTHR35562|PTHR35562:SF2|SSF160443 METD_RS09775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 METD_RS09780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|PTHR18968|PTHR18968:SF12|SSF52467|SSF52518 METD_RS09790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005496 Integral membrane protein TerC GO:0016021 PF03741|PTHR30060|PTHR30060:SF1 METD_RS09795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001206|IPR005218|IPR016064|IPR017438 Diacylglycerol kinase, catalytic domain|Diacylglycerol/lipid kinase|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0008152|GO:0016301 G3DSA:3.40.50.10330|PF00781|PTHR12358|PTHR12358:SF43|SM00046|SSF111331|TIGR00147 METD_RS09805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SSF50199 METD_RS09810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000326|IPR001011|IPR011158 Acid phosphatase, class A, bacterial|Nonspecific acid phosphatase, class A|Phosphatidic acid phosphatase type 2/haloperoxidase GO:0003993|GO:0030288 G3DSA:1.20.144.10|PF01569|PIRSF000897|PR00483|SM00014|SSF48317 METD_RS09815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR26374|PTHR26374:SF200|SSF53474 METD_RS09820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13560|PTHR36511|PTHR36511:SF2|SSF47413 METD_RS09825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009387 Toxin HigB-2 PF06296|PIRSF039032 METD_RS09830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR005664|IPR011004|IPR023180 Hexapeptide repeat|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like GO:0008666|GO:0009089 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|PTHR19136|PTHR19136:SF52|SSF51161|TIGR00965 METD_RS09835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|PTHR24567|SM00100|SSF51206 METD_RS09840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF50|SM00448|SM00862|SSF52172 METD_RS09845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PF03734|PTHR38589|PTHR38589:SF1|SSF141523 METD_RS09850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PTHR10146|SSF51419|TIGR00044 METD_RS09855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 METD_RS09860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PR00326|PTHR11649|PTHR11649:SF56|SSF116878|SSF52540|TIGR00231|TIGR00450 METD_RS09865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR010982|IPR013655 Lambda repressor-like, DNA-binding domain|PAS domain|PAS fold-3 GO:0003677|GO:0005515 G3DSA:1.10.260.40|G3DSA:3.30.450.20|PF08447|PTHR24423|SSF47413|SSF55785|TIGR00229 METD_RS09875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PR00411|PS01280|PS01281|PTHR11806|PTHR11806:SF0|SM01228|SSF51905|TIGR00136 METD_RS09880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 METD_RS09885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 METD_RS09890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:3.90.1530.10|PF02195|PTHR33375|SM00470|SSF110849|TIGR00180 METD_RS09895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005790|IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.20|PF06144|PTHR34388|SSF48019|SSF52540|TIGR01128 METD_RS09900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 PF04390 METD_RS09910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018666 Protein of unknown function DUF2125 PF09898 METD_RS09915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13704 METD_RS09920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|PTHR21363|PTHR21363:SF0|SSF48179|SSF51735 METD_RS09925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PTHR11751|PTHR11751:SF347|SSF53383|TIGR01141 METD_RS09935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF17|SSF56935|TIGR01783 METD_RS09940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|PTHR30540|PTHR30540:SF36 METD_RS09945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004588|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0005506|GO:0008299|GO:0016114|GO:0046429|GO:0055114 MF_00159|PF04551|PIRSF004640|PTHR30454|SSF56014|TIGR00612 METD_RS09950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR14226|PTHR14226:SF37|SSF52151 METD_RS09955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991|IPR013216|IPR029063 HTH ArsR-type DNA-binding domain|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0008152|GO:0008168 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF01022|PF08241|PR00778|PTHR10108|SM00418|SSF46785|SSF53335 METD_RS09960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|PTHR21091|PTHR21091:SF31|SSF51730|TIGR00676 METD_RS09965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|PTHR21091|PTHR21091:SF112|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 METD_RS09975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase PF13480|SSF55729 METD_RS09980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR34216|SSF88713 METD_RS09990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021265 Protein of unknown function DUF2842 PF11003 METD_RS09995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003780|IPR023754 COX15/CtaA family|Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016021|GO:0016627|GO:0055114 MF_01665|PF02628|PTHR23289|PTHR23289:SF2 METD_RS10000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004254|IPR005744 AdipoR/Haemolysin-III-related|Hly-III GO:0016021|GO:0019835 PF03006|PTHR20855|PTHR20855:SF3 METD_RS10010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|PTHR30557|PTHR30557:SF1|TIGR00190 METD_RS10015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005186 FlaG protein G3DSA:3.30.160.170|PF03646|SSF160214 METD_RS10020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010845 Flagellar FlaF GO:0044781 PF07309 METD_RS10035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like G3DSA:3.60.21.10|PF12850|SSF56300 METD_RS10040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|SSF74653|TIGR01352 METD_RS10045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Biopolymer transport, TolR GO:0005215|GO:0006810|GO:0015031|GO:0016020|GO:0016021 PF02472|PTHR30558|PTHR30558:SF7|TIGR02801 METD_RS10050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF3 METD_RS10060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF127|SSF49764 METD_RS10065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009531 Protein of unknown function DUF1150 PF06620 METD_RS10070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|PTHR16138|SSF53474 METD_RS10075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 METD_RS10080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001288|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PTHR10938|SSF54364|SSF55200|TIGR00168 METD_RS10085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008928|IPR010401|IPR032790|IPR032856 Glycogen debranching enzyme|Glycogen debranching enzyme, C-terminal|Putative glycogen debranching enzyme, N-terminal|Six-hairpin glycosidase-like GO:0003824|GO:0004134|GO:0004135|GO:0005980 PF06202|PF14742|PTHR10569|PTHR10569:SF1|SSF48208 METD_RS10090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 METD_RS10095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|PTHR33343|SSF143034|TIGR00001 METD_RS10100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|SSF74731|TIGR01032 METD_RS10105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PTHR11538|SSF46589|SSF55681|TIGR00468 METD_RS10110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 METD_RS10115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004027|IPR010602|IPR032710 NTF2-like domain|Protein of unknown function DUF1186|SEC-C motif G3DSA:3.10.450.50|PF02810|PF06685|PTHR33747|PTHR33747:SF2|SSF103642 METD_RS10120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF153|SSF69572 METD_RS10125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001261|IPR002933|IPR005941|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0006508|GO:0008152|GO:0008237|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|PS00759|PTHR11014|SSF53187|SSF55031|TIGR01246 METD_RS10130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|PTHR11142:SF0|SSF55120|TIGR00071 METD_RS10135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PTHR11138|SSF50486|SSF53328|TIGR00460 METD_RS10140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420|TIGR00079 METD_RS10145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018584 Glycosyltransferase family 87 GO:0016758 PF09594 METD_RS10150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|PS01300|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 METD_RS10155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001272|IPR008210|IPR013035 Phosphoenolpyruvate carboxykinase, ATP-utilising|Phosphoenolpyruvate carboxykinase, C-terminal|Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0004612|GO:0005524|GO:0006094|GO:0017076 G3DSA:3.40.449.10|G3DSA:3.90.228.20|MF_00453|PF01293|PIRSF006294|PTHR30031|PTHR30031:SF0|SSF53795|SSF68923|TIGR00224 METD_RS10160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004383|IPR006638|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Elongator protein 3/MiaB/NifB|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|PTHR30544|PTHR30544:SF5|SM00729|SSF102114|TIGR00048 METD_RS10165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|PTHR21090|SSF56796|TIGR01357 METD_RS10170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|PTHR30055:SF60|SSF46689 METD_RS10175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001236|IPR001557|IPR011275|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 3|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_00487|PF00056|PF02866|PIRSF000102|PR00086|PTHR11540|PTHR11540:SF16|SSF51735|SSF56327|TIGR01763 METD_RS10180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|SSF52210|SSF56059|TIGR01016 METD_RS10185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|SM00881|SSF51735|SSF52210|TIGR01019 METD_RS10190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001017|IPR005475|IPR011603|IPR029061|IPR031717|IPR032106 2-oxoglutarate dehydrogenase E1 component|2-oxoglutarate dehydrogenase E1 component, N-terminal domain|Dehydrogenase, E1 component|Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal|Thiamin diphosphate-binding fold|Transketolase-like, pyrimidine-binding domain GO:0004591|GO:0006099|GO:0008152|GO:0016624|GO:0030976|GO:0055114 G3DSA:3.40.50.970|PF00676|PF02779|PF16078|PF16870|PIRSF000157|PTHR23152|SM00861|SSF52518|TIGR00239 METD_RS10195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide succinyltransferase|E3-binding domain|Single hybrid motif GO:0004149|GO:0006099|GO:0008152|GO:0016746|GO:0045252 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|PTHR23151:SF47|SSF47005|SSF51230|SSF52777|TIGR01347 METD_RS10200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF151|SSF51905|SSF55424|TIGR01350 METD_RS10205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS10215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007375|IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Sarcosine oxidase, gamma subunit GO:0005515 G3DSA:3.30.1360.120|PF04268|SSF103025 METD_RS10220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000103|IPR006222|IPR006277|IPR013977|IPR023753|IPR027266|IPR029043 FAD/NAD(P)-binding domain|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Sarcosine oxidase, alpha subunit GO:0005515|GO:0008115|GO:0016491|GO:0046653|GO:0055114 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|G3DSA:3.50.50.60|PF01571|PF08669|PF12831|PF13510|PIRSF037980|PR00469|PTHR13847|PTHR13847:SF189|SSF101790|SSF103025|SSF51905|TIGR01372 METD_RS10225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 PF04267 METD_RS10230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006076|IPR006278|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|Sarcosine oxidase subunit beta GO:0008115|GO:0016491|GO:0046653|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF44|SSF51905|SSF54373|TIGR01373 METD_RS10235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR009057|IPR018060|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PTHR11019|PTHR11019:SF90|SM00342|SSF52317 METD_RS10240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029055 Nucleophile aminohydrolases, N-terminal G3DSA:3.60.20.10|PF13522|PTHR11907|PTHR11907:SF0|SSF56235 METD_RS10245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002489|IPR012061 Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, large subunit domain 3 stand-alone protein GO:0008152|GO:0016491|GO:0055114 G3DSA:2.160.20.60|PF01493|PIRSF006519|PTHR39673|SSF69336 METD_RS10250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002932|IPR013785|IPR024188 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase large subunit-like protein GO:0003824|GO:0006537|GO:0015930|GO:0016638|GO:0055114 G3DSA:3.20.20.70|PF01645|PIRSF006429|PIRSF500061|PTHR11938|PTHR11938:SF65|SSF51395 METD_RS10255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008146|IPR008147|IPR014746|IPR017536|IPR027303 Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase, type III|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006542|GO:0006807 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PS00181|PTHR20852|PTHR20852:SF7|SM01230|SSF54368|SSF55931|TIGR03105 METD_RS10275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010255|IPR011049|IPR018511|IPR019791 Haem peroxidase|Haem peroxidase, animal|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0004601|GO:0006979|GO:0020037|GO:0055114 G3DSA:1.10.640.10|G3DSA:2.150.10.10|PF03098|PR00313|PS00330|PTHR11475|PTHR11475:SF4|SSF48113|SSF51120 METD_RS10280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF0|SM00382|SSF52540|SSF90123|TIGR01842 METD_RS10285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR011049|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PS00330|PTHR38340|SSF51120 METD_RS10290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PTHR30386|PTHR30386:SF3|TIGR01843 METD_RS10300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|PTHR24421|PTHR24421:SF1|SM00387|SSF55874 METD_RS10305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 METD_RS10310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|SSF53474 METD_RS10315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 METD_RS10320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003018|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF13185|PR00344|PTHR24423|SM00065|SM00304|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55874|SSF58104 METD_RS10325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS10330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008030|IPR016040 NAD(P)-binding domain|NmrA-like domain G3DSA:3.40.50.720|PF05368|PTHR14194|SSF51735 METD_RS10335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS10340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30137|PTHR30137:SF8|SSF51679 METD_RS10345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR24559|SSF46689|SSF53098 METD_RS10350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30137|PTHR30137:SF8|SSF51679 METD_RS10355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032808 DoxX family PF13564 METD_RS10360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF29|SSF46785|SSF53850 METD_RS10365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR14119|PTHR14119:SF11|SSF52499 METD_RS10370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|PTHR11695|PTHR11695:SF294|SM00829|SSF50129|SSF51735 METD_RS10375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF26|SSF46785|SSF53850 METD_RS10380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR35006|PTHR35006:SF1|SSF54593 METD_RS10385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS10390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 METD_RS10395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR33336|SSF54909 METD_RS10400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 METD_RS10410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013154|IPR014182|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-binding type 1|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PF13602|PTHR11695|PTHR11695:SF558|SM00829|SSF50129|SSF51735|TIGR02817 METD_RS10415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|SSF103481 METD_RS10420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS10425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS10435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR003410|IPR011050|IPR012332|IPR013425|IPR023631 Amidase|Amidase signature domain|Autotransporter-associated beta strand repeat|HYR domain|P22 tailspike C-terminal domain-like|Pectin lyase fold/virulence factor GO:0016884 G3DSA:2.160.20.20|G3DSA:3.90.1300.10|PF01425|PF02494|PF12951|PTHR11895|PTHR11895:SF8|SSF51126|SSF75304|TIGR02601 METD_RS10440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|PTHR11119|PTHR11119:SF3|TIGR00801|TIGR03173 METD_RS10445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024507|IPR032710 NTF2-like domain|Protein of unknown function DUF3225 G3DSA:3.10.450.50|PF11533|SSF54427 METD_RS10450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR014087|IPR023631 Amidase|Amidase signature domain|Amidohydrolase, AtzE type GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF74|SSF75304|TIGR02715 METD_RS10455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025148 Protein of unknown function DUF4089 PF13318 METD_RS10460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF19|SSF52499 METD_RS10465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 G3DSA:2.40.230.20|SSF111364 METD_RS10470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF37|SSF51338|SSF51556 METD_RS10475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF239|SM00382|SSF52540 METD_RS10480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF22 METD_RS10485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF33 METD_RS10490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003760 Basic membrane lipoprotein GO:0005886 G3DSA:3.40.50.2300|PF02608|PTHR34296|PTHR34296:SF1 METD_RS10495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF22 METD_RS10500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR32196|PTHR32196:SF33 METD_RS10505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003010|IPR022843 Carbon-nitrogen hydrolase|Formamidase GO:0004328|GO:0006807|GO:0016810 G3DSA:3.60.110.10|MF_01243|PF00795|PTHR23088|PTHR23088:SF32|SSF56317 METD_RS10510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF19|SSF52499 METD_RS10515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF239|SM00382|SSF52540 METD_RS10520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF18 METD_RS10525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003760 Basic membrane lipoprotein GO:0005886 G3DSA:3.40.50.2300|PF02608|PTHR34296|PTHR34296:SF1 METD_RS10540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000383|IPR005674|IPR008979|IPR013736|IPR029058 Alpha/Beta hydrolase fold|CocE/Serine esterase|Galactose-binding domain-like|Xaa-Pro dipeptidyl-peptidase, C-terminal|Xaa-Pro dipeptidyl-peptidase-like domain GO:0008239|GO:0016787 G3DSA:1.10.3020.10|G3DSA:2.60.120.260|G3DSA:3.40.50.1820|PF02129|PF08530|PTHR11731|PTHR11731:SF151|SM00939|SSF49785|SSF53474|TIGR00976 METD_RS10545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003785|IPR024087 Creatininase-like domain|Creatininase/formamide hydrolase G3DSA:3.40.50.10310|PF02633|PTHR35005|PTHR35005:SF1|SSF102215 METD_RS10550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 METD_RS10555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|SSF52218 METD_RS10560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006094|IPR016164|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PTHR11748|PTHR11748:SF35|SSF55103|SSF56176 METD_RS10565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005123|IPR026992|IPR027443 Isopenicillin N synthase-like|Non-haem dioxygenase N-terminal domain|Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 G3DSA:2.60.120.330|PF03171|PF14226|PTHR10209|PTHR10209:SF68|SSF51197 METD_RS10570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168|IPR027939 NMT1/THI5 family|SsuA/THI5-like GO:0009228 G3DSA:3.40.190.10|PF09084|PTHR31528|PTHR31528:SF6|SSF53850 METD_RS10575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21266|SSF50022|SSF55961 METD_RS10580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF9|SSF161098 METD_RS10585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF10|SM00382|SSF52540 METD_RS10590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168|IPR027939 NMT1/THI5 family|SsuA/THI5-like GO:0009228 PF09084|PTHR31528|PTHR31528:SF6|SSF53850 METD_RS10595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF34|SSF46785|SSF53850 METD_RS10600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011059|IPR013108|IPR032466 Amidohydrolase 3|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF07969|PTHR32027|PTHR32027:SF0|SSF51338|SSF51556 METD_RS10615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30126|PTHR30126:SF29|SSF46785|SSF53850 METD_RS10620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006680|IPR011059|IPR014311|IPR032466 Amidohydrolase-related|Guanine deaminase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0006147|GO:0008270|GO:0008892|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF6|SSF51338|SSF51556|TIGR02967 METD_RS10625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR001041|IPR002888|IPR006058|IPR008274|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF00111|PF01315|PF01799|PF02738|PS00197|PTHR11908|PTHR11908:SF96|SM01008|SSF47741|SSF54292|SSF54665|SSF56003 METD_RS10630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002346|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.465.10|PF00941|PTHR11908|PTHR11908:SF68|SSF56176 METD_RS10635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168|IPR027939 NMT1/THI5 family|SsuA/THI5-like GO:0009228 G3DSA:3.40.190.10|PF09084|PTHR31528|SSF53850 METD_RS10640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PF00528|PTHR30151|PTHR30151:SF21|SSF161098 METD_RS10645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF9|SSF161098 METD_RS10650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF454|SM00382|SSF52540 METD_RS10655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002563|IPR012349|IPR019917 FMN reductase (NADH) RutF|FMN-binding split barrel|Flavin reductase like domain GO:0008752|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|MF_00833|PF01613|PTHR30466|PTHR30466:SF2|SM00903|SSF50475|TIGR03615 METD_RS10660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR019913|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 G3DSA:3.40.50.1820|MF_00832|PF00561|PR00111|PTHR10992|SSF53474|TIGR03611 METD_RS10665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006175|IPR013813|IPR019898 Endoribonuclease L-PSP/chorismate mutase-like|Putative aminoacrylate peracid reductase RutC|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|MF_00831|PF01042|PTHR11803|SSF55298|TIGR03610 METD_RS10670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868|IPR019916 Isochorismatase, RutB|Isochorismatase-like GO:0003824|GO:0008152|GO:0016811 G3DSA:3.40.50.850|MF_00830|PF00857|PTHR11080|PTHR11080:SF19|SSF52499|TIGR03614 METD_RS10675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251|IPR019914 Luciferase-like domain|Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0016705|GO:0055114 G3DSA:3.20.20.30|MF_01699|PF00296|PTHR30011|PTHR30011:SF1|SSF51679|TIGR03612 METD_RS10680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR013573|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator YcdC, C-terminal GO:0003677|GO:0045892 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF08362|PR00455|PTHR30055|PTHR30055:SF53|SSF46689|SSF48498 METD_RS10685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007247|IPR011051|IPR023525|IPR024060 RmlC-like cupin domain|Ureidoglycolate lyase|Ureidoglycolate lyase domain|Ureidoglycolate lyase, bacterial GO:0000256|GO:0004848|GO:0050385 G3DSA:2.60.120.480|MF_00616|PF04115|PIRSF017306|PTHR21221|PTHR21221:SF2|SSF51182 METD_RS10690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710|IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein|Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR34571|PTHR34571:SF1|SSF51182|TIGR03214 METD_RS10695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR010389 Cytochrome c-like domain|Domain of unknown function DUF989 GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF06181|SSF46626 METD_RS10700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS10705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002509|IPR011330|IPR017580|IPR017625|IPR018020 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase|Putative urate catabolism protein GO:0003824|GO:0005975|GO:0016810|GO:0019428 G3DSA:1.10.3330.10|G3DSA:3.20.20.370|PF01522|PF09349|PTHR10587|PTHR10587:SF72|SSF158694|SSF88713|TIGR03164|TIGR03212 METD_RS10710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014306|IPR023416 Hydroxyisourate hydrolase|Transthyretin/hydroxyisourate hydrolase, superfamily GO:0006144|GO:0033971 G3DSA:2.60.40.180|PF00576|PTHR10395|PTHR10395:SF7|SSF49472|TIGR02962 METD_RS10715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008526 Inner membrane protein YedI PF05661|PIRSF016660|PTHR30503 METD_RS10720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|PTHR33121|PTHR33121:SF13|SM00052|SSF141868 METD_RS10725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF710|SM00267|SSF55073|TIGR00254 METD_RS10730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005618|IPR011250 Outer membrane protein, OmpW|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.160.20|PF03922|PTHR36920|PTHR36920:SF1|SSF56925 METD_RS10755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PS00462|PTHR11686|PTHR11686:SF9|SSF56235|TIGR00066 METD_RS10760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 METD_RS10765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|SM00563|SSF69593 METD_RS10770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PF04365 METD_RS10775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025528 BrnA antitoxin of type II toxin-antitoxin system PF14384 METD_RS10780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010743|IPR029063 Methionine biosynthesis MetW|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF07021|PTHR10108|PTHR10108:SF831|SSF53335|TIGR02081 METD_RS10785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|MF_00296|PF00561|PIRSF000443|PTHR32268|PTHR32268:SF11|SSF53474|TIGR01392 METD_RS10790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|PF01641|PTHR10173|PTHR10173:SF18|SSF51316|TIGR00357 METD_RS10795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF29|SSF55068|TIGR00401 METD_RS10800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|PTHR30295|PTHR30295:SF0|SSF47240|TIGR00754 METD_RS10805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS10810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757|PTHR23028 METD_RS10815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012347|IPR025419 Domain of unknown function DUF4142|Ferritin-related G3DSA:1.20.1260.10|PF13628 METD_RS10820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PTHR11228|PTHR11228:SF26|SM00729|SSF102114 METD_RS10835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|PTHR15238|SSF57829|TIGR01023 METD_RS10840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|PTHR20881|SSF51621|TIGR00222 METD_RS10845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005746|IPR012336|IPR013766 Thioredoxin|Thioredoxin domain|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PTHR10438|PTHR10438:SF298|SSF52833 METD_RS10850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001763|IPR022376 PQQ-dependent catabolism-associated CXXCW motif|Rhodanese-like domain G3DSA:3.40.250.10|SSF52821|TIGR03865 METD_RS10855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013783|IPR014756|IPR014880|IPR030831|IPR032711 Ig-like SoxY domain|Immunoglobulin E-set|Immunoglobulin-like fold|Quinoprotein dehydrogenase-associated SoxYZ-like carrier|Sulphur oxidation protein SoxZ G3DSA:2.60.40.10|PF08770|PF13501|SSF81296|TIGR04557 METD_RS10860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR030829 Metallo-beta-lactamase|Quinoprotein relay system zinc metallohydrolase 2 G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF95|SM00849|SSF56281|TIGR04559 METD_RS10865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689|SSF48498 METD_RS10870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|PTHR33571|SSF81301 METD_RS10875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008201 Protein of unknown function DUF86 PF01934|PTHR34139 METD_RS10880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF43|SM00833|SSF52540|SSF90002 METD_RS10890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007016 O-antigen ligase-related PF04932 METD_RS10895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013655|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01590|PF02518|PF08447|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 METD_RS10900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007413 Protein of unknown function DUF463, YcjX-like protein PF04317|PIRSF019381|PTHR38605|PTHR38605:SF1 METD_RS10905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006507|IPR021147 Protein of unknown function DUF697|Uncharacterised protein family UPF0283 PF05128|PTHR39342|PTHR39342:SF1|TIGR01620 METD_RS10915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010662|IPR029058 Alpha/Beta hydrolase fold|Putative hydrolase RBBP9/YdeN GO:0016787 G3DSA:3.40.50.1820|PF06821|SSF53474 METD_RS10920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR01048 METD_RS10940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008325 Uncharacterised conserved protein UCP033924 PF06577|PIRSF033924 METD_RS10945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001352|IPR012337|IPR024567 Ribonuclease H-like domain|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|PF01351|PTHR10954|SSF53098 METD_RS10950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|PTHR12526:SF363|SSF53756 METD_RS10955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR34990|PTHR34990:SF2|SSF56300 METD_RS10960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|PTHR21152|PTHR21152:SF21|SSF53383 METD_RS10965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|PTHR10996|SSF51735|SSF52283 METD_RS10970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015259|IPR016040 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal|NAD(P)-binding domain G3DSA:3.40.50.10280|G3DSA:3.40.50.720|PF09176|SSF51735|SSF53223 METD_RS10975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 PF04961|PTHR12234|SSF101262 METD_RS10980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|PTHR11815:SF1|SSF52210|SSF56059|TIGR01016 METD_RS10985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|PTHR11117:SF2|SM00881|SSF51735|SSF52210|TIGR01019 METD_RS10990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015813|IPR021135|IPR033129 Phosphoenolpyruvate carboxylase|Phosphoenolpyruvate carboxylase, His active site|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0006099|GO:0008964|GO:0015977 G3DSA:1.20.1440.90|PF00311|PR00150|PS00393|PTHR30523|PTHR30523:SF0|SSF51621 METD_RS10995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|PTHR32308:SF2|SSF51621 METD_RS11000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010406 Protein of unknown function DUF1003 PF06210 METD_RS11005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|PTHR17630|PTHR17630:SF42|SSF53474 METD_RS11010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 G3DSA:3.30.1360.20|PF01329|PTHR12599|PTHR12599:SF0|SSF55248 METD_RS11015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 METD_RS11020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 METD_RS11025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS11030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001479|IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily|Quinoprotein dehydrogenase, conserved site GO:0005509|GO:0016020|GO:0016614|GO:0030288|GO:0055114 G3DSA:2.140.10.10|PF01011|PF13360|PS00364|PTHR32303|PTHR32303:SF6|SM00564|SSF50998|TIGR03075 METD_RS11035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR022411 C-type cytochrome, methanol metabolism-related|Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626|TIGR03874 METD_RS11040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR022448 Quinoprotein dehydrogenase-associated|Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850|TIGR03871 METD_RS11045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|PTHR20941|SSF55083|TIGR01498 METD_RS11050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|PTHR20941|SM00905|SSF55620|TIGR00525|TIGR00526 METD_RS11055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496 METD_RS11070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000385|IPR007197|IPR011843|IPR013785|IPR017200|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Coenzyme PQQ biosynthesis protein E, bacteria|Coenzyme PQQ synthesis protein E|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Radical SAM GO:0003824|GO:0018189|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00660|PF04055|PF13186|PIRSF037420|PS01305|PTHR11228|PTHR11228:SF32|SSF102114|TIGR02109|TIGR04085 METD_RS11075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004305|IPR008792|IPR011845|IPR016084|IPR022479 Coenzyme PQQ biosynthesis protein C|Coenzyme PQQ synthesis D|Coenzyme PQQ synthesis D, bacteria|Haem oxygenase-like, multi-helical|Thiaminase-2/PQQC GO:0018189|GO:0048038|GO:0055114 G3DSA:1.20.910.10|MF_00654|PF03070|PF05402|PTHR40279|PTHR40279:SF2|SSF48613|TIGR02111|TIGR03859 METD_RS11080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR011842 Coenzyme PQQ biosynthesis protein B|Metallo-beta-lactamase GO:0006810|GO:0018189 G3DSA:3.60.15.10|MF_00653|PF12706|SSF56281|TIGR02108 METD_RS11085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 MF_00656|PF08042|TIGR02107 METD_RS11090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF578|SM00448|SM00862|SSF52172 METD_RS11095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 METD_RS11105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002489|IPR017550 Formylmethanofuran dehydrogenase subunit C|Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0015948|GO:0016491|GO:0018493|GO:0046914|GO:0055114 G3DSA:2.160.20.60|PF01493|PTHR39673|PTHR39673:SF3|SSF69336|TIGR03122 METD_RS11110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002770|IPR014053|IPR022667|IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr|Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal|Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal|Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain GO:0006730|GO:0016740|GO:0030270 G3DSA:3.30.70.520|MF_00579|PF01913|PF02741|PIRSF006414|SSF55112|TIGR03119 METD_RS11115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011059|IPR012027|IPR013108|IPR032466 Amidohydrolase 3|Formylmethanofuran dehydrogenase, subunit A|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|PF07969|PIRSF006453|SSF51338|SSF51556|TIGR03121 METD_RS11120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029035 DHS-like NAD/FAD-binding domain G3DSA:3.40.50.1220 METD_RS11125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004422|IPR006204|IPR013750|IPR014721|IPR020568 GHMP kinase N-terminal domain|GHMP kinase group 1|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524 G3DSA:3.30.230.10|PF00288|PF08544|PIRSF004884|SSF54211|TIGR00144 METD_RS11130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015259|IPR016040 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal|NAD(P)-binding domain G3DSA:3.40.50.10280|G3DSA:3.40.50.720|PF09176|SSF51735|SSF53223 METD_RS11135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003806|IPR013816|IPR016677 ATP-grasp fold, DUF201-type|ATP-grasp fold, subdomain 2|Uncharacterised conserved protein UCP016817, ATP-dependent carboligase GO:0005524|GO:0046872 G3DSA:3.30.470.20|PF02655|PIRSF016817|SSF56059 METD_RS11140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 G3DSA:3.30.1030.10|MF_00486|PF02289|SSF56199|TIGR03120 METD_RS11145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004666|IPR013651|IPR013815|IPR013816|IPR016185 ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain|Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0003824|GO:0005524|GO:0006464 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF08443|PTHR21621|PTHR21621:SF0|SSF56059|TIGR00768 METD_RS11150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 PF01874|PTHR42280|PTHR42280:SF1 METD_RS11155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014826|IPR020568 Formaldehyde-activating enzyme|Ribosomal protein S5 domain 2-type fold GO:0016051|GO:0016840 G3DSA:3.30.230.60|PF08714|PTHR35039|PTHR35039:SF1|SSF54211|TIGR03126 METD_RS11160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0008152 G3DSA:3.20.20.70|PF00977|PTHR21235|PTHR21235:SF15|SSF51366 METD_RS11165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002756|IPR002821 4-[[4-(2-aminoethyl)phenoxy]-methyl]-2-furanmethanamine-glutamate synthase|Hydantoinase/oxoprolinase GO:0016787 G3DSA:3.30.420.190|G3DSA:3.30.420.40|PF01968|SSF53067|TIGR03123 METD_RS11175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011048|IPR011964|IPR015943|IPR019405 Cytochrome cd1-nitrite reductase-like, haem d1 domain|Lactonase, 7-bladed beta propeller|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF10282|PTHR13833|SSF51004|TIGR02276 METD_RS11180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|PTHR39332|PTHR39332:SF2|SSF55961 METD_RS11185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|PTHR39332|PTHR39332:SF2|SSF55961 METD_RS11190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007386|IPR012349 FMN-binding split barrel|Protein of unknown function DUF447 GO:0010181|GO:0016491|GO:0055114 G3DSA:1.20.58.290|G3DSA:2.30.110.10|PF04289|SSF50475 METD_RS11195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000489|IPR011005 Dihydropteroate synthase-like|Pterin-binding domain GO:0042558|GO:0044237 G3DSA:3.20.20.20|PTHR20941|PTHR20941:SF11|SSF51717 METD_RS11200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001048 Aspartate/glutamate/uridylate kinase G3DSA:3.40.1160.10|SSF53633 METD_RS11205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007565|IPR013785 (5-formylfuran-3-yl)methyl phosphate synthase|Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.140|G3DSA:3.20.20.70|PF04476|PIRSF015957 METD_RS11210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021698 Protein of unknown function DUF2380 PF11684 METD_RS11215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022478|IPR028081|IPR028082 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system|Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822|TIGR03863 METD_RS11220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011045|IPR011964|IPR015943|IPR019405|IPR022456 Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|PQQ-dependent catabolism-associated beta-propeller protein|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF10282|PTHR13833|SSF50974|TIGR02276|TIGR03866 METD_RS11225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420|SSF49503 METD_RS11235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR022467|IPR027417 AAA+ ATPase domain|ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540|TIGR03864 METD_RS11240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000412|IPR013525|IPR022403 ABC-2 transporter|ABC-2 type transporter|Alcohol ABC transporter, permease protein GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30294|PTHR30294:SF13|TIGR03861 METD_RS11250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF37|SSF56935 METD_RS11255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002048|IPR011992|IPR018247 EF-Hand 1, calcium-binding site|EF-hand domain|EF-hand domain pair GO:0005509 G3DSA:1.10.238.10|PF13202|PS00018|PTHR10891|PTHR10891:SF598|SSF47473 METD_RS11265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003362|IPR016040|IPR017473|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|NAD(P)-binding domain|Undecaprenyl-phosphate glucose phosphotransferase, WcaJ G3DSA:3.40.50.720|PF02397|PF13727|PTHR30576|PTHR30576:SF9|SSF51735|TIGR03023|TIGR03025 METD_RS11270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|PTHR12526:SF387|SSF53756 METD_RS11275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619|PTHR33619:SF2 METD_RS11280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003856|IPR032807 Lipopolysaccharide biosynthesis|Tyrosine kinase, G-rich domain GO:0009103|GO:0016020 PF02706|PF13807|PTHR32309|PTHR32309:SF13 METD_RS11285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|PTHR33449|PTHR33449:SF1|SSF82607|TIGR00103 METD_RS11290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR008921|IPR012763|IPR022107|IPR022754|IPR027417 AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, subunit gamma/ tau, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF12362|PF13177|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 METD_RS11300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025711 PepSY domain PF13670 METD_RS11305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000523|IPR004482|IPR014721|IPR020568|IPR027417 Magnesium chelatase ChlI domain|Mg chelatase-related protein|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13541|PTHR32039|PTHR32039:SF7|SSF52540|SSF54211|TIGR00368 METD_RS11310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119|IPR011109|IPR025827 DNA-binding recombinase domain|Recombinase zinc beta ribbon domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PF07508|PF13408|PTHR30461|PTHR30461:SF3|SM00857|SSF53041 METD_RS11330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017601|IPR017642 DGQHR-containing domain|DNA sulphur modification protein DndB PF14072|TIGR03187 METD_RS11335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119|IPR009057 Homeodomain-like|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PTHR30461|PTHR30461:SF9|SM00857|SSF53041 METD_RS11365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016138 Ribosome-inactivating protein, subdomain 1 GO:0017148|GO:0030598 G3DSA:3.40.420.10 METD_RS11380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF135|SSF103473 METD_RS11385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60 METD_RS11390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000432|IPR027417 DNA mismatch repair protein MutS, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:3.40.50.300|PF00488|PTHR11361|SM00534|SSF52540 METD_RS11395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000432|IPR027417 DNA mismatch repair protein MutS, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:3.40.50.300|PF00488|PTHR11361|SM00534|SSF52540 METD_RS11400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005094 Endonuclease relaxase, MobA/VirD2 PF03432 METD_RS11410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF009320|PTHR13696|SSF52540 METD_RS11420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005090|IPR011991|IPR021760 Replication protein C|Replication protein-C C-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03428|PF11800|SSF46785 METD_RS11425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|SSF47413 METD_RS11435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|PF00436|PIRSF002070|SSF50249 METD_RS11440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005090|IPR011991|IPR021760 Replication protein C|Replication protein-C C-terminal|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03428|PF11800|SSF46785 METD_RS11445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003115|IPR004437|IPR011111|IPR017819 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin|Plasmid partitioning protein, RepB|RepB plasmid partition GO:0003677 G3DSA:3.90.1530.10|PF02195|PF07506|PTHR33375|SM00470|SSF109709|SSF110849|TIGR00180|TIGR03454 METD_RS11450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR017818|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase|Plasmid partitioning protein, RepA G3DSA:1.10.1660.10|G3DSA:3.40.50.300|PF01656|PTHR13696|PTHR13696:SF52|SSF52540|TIGR03453 METD_RS11455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR010998|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|SSF47823|SSF56349 METD_RS11465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN domain-like|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|PTHR33653|PTHR33653:SF1|SSF88723 METD_RS11470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF4|SSF143120|TIGR01552 METD_RS11480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011670|IPR021068 HTH DNA binding domain|Protein of unknown function DUF1612 PF07756|PF11972 METD_RS11485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009492 TniQ PF06527 METD_RS11490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008868|IPR027417 Bacterial TniB|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05621|SSF52540 METD_RS11495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR009057|IPR012337|IPR015378 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain|Transposase-like, Mu, C-terminal GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PF09299|SSF53098 METD_RS11500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011670|IPR021068 HTH DNA binding domain|Protein of unknown function DUF1612 PF07756|PF11972 METD_RS11510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR23077|SM00382|SSF52540 METD_RS11515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|SSF52743 METD_RS11520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026001 Abortive infection protein-like, C-terminal domain PF14355 METD_RS11525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021352 Protein of unknown function DUF2971 PF11185 METD_RS11535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015917|IPR029030 Caspase-like domain|Peptidase C14A, caspase catalytic domain GO:0006915|GO:0008234 G3DSA:3.40.50.1460|PF00656|PTHR22576|PTHR22576:SF30|SM00115|SSF52129 METD_RS11540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018754 Protein of unknown function DUF2285 PF10074 METD_RS11550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007159|IPR031848 PrlF antitoxin|SpoVT-AbrB domain GO:0001558|GO:0003677|GO:0003700|GO:0097351 G3DSA:2.10.260.10|PD030562|PF15937|SM00966|SSF89447 METD_RS11555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021679 Toxin endonuclease, YhaV PF11663 METD_RS11560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007948 Protein of unknown function DUF736 PF05284 METD_RS11565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|PTHR20852|PTHR20852:SF15|SM01230|SSF54368|SSF55931|TIGR00653 METD_RS11570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|SSF52402 METD_RS11575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013610|IPR017113 Antirestriction, ArdC|Domain of unknown function DUF1738 PF08401|PIRSF037112 METD_RS11600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017042 Uncharacterised conserved protein UCP036055 PIRSF036055 METD_RS11605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003115 ParB/Sulfiredoxin G3DSA:3.90.1530.10|PF02195|PTHR33375|SM00470|SSF109709|SSF110849 METD_RS11610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR002052|IPR003356|IPR006935|IPR014001|IPR027417|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0005524|GO:0006306|GO:0008168|GO:0008170|GO:0016787|GO:0032259 G3DSA:3.40.50.150|G3DSA:3.40.50.300|PF00271|PF02384|PF04851|PR00507|PS00092|SM00487|SM00490|SSF52540|SSF53335 METD_RS11620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009862 Protein of unknown function DUF1419 PF07215 METD_RS11635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025586 PcfJ-like protein PF14284 METD_RS11660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017041|IPR025054 Domain of unknown function DUF3991|Uncharacterised conserved protein UCP036054 G3DSA:3.40.1360.10|PF13154|PF13155|PIRSF036054 METD_RS11670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269 METD_RS11680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS11685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098|TIGR02141 METD_RS11690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256 METD_RS11695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010093|IPR024370 PBP domain|SinI-like, DNA-binding domain GO:0003677 G3DSA:3.40.190.10|PF12727|PF12728|PTHR38431|SSF53850|TIGR01764 METD_RS11700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS11705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF76|SSF52091 METD_RS11710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007694|IPR027417 DNA helicase, DnaB-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003678|GO:0005524|GO:0006260 G3DSA:3.40.50.300|PF03796|PTHR30153|SSF52540 METD_RS11720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PF00872|PTHR33217|PTHR33217:SF1 METD_RS11725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS11730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PTHR30007|PTHR30007:SF0 METD_RS11735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012337 Ribonuclease H-like domain GO:0003676 PF13546|PTHR33627|PTHR33627:SF1|SSF53098 METD_RS11745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|PTHR11260:SF179|SSF47616|SSF52833 METD_RS11760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PF00872|PTHR33217|PTHR33217:SF1 METD_RS11765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004046|IPR010987 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like G3DSA:1.20.1050.10|PF14497|PTHR11571|PTHR11571:SF150|SSF47616 METD_RS11775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000132|IPR003010 Carbon-nitrogen hydrolase|Nitrilase/cyanide hydratase, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS00920|PTHR23088|PTHR23088:SF5|SSF56317 METD_RS11780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13409|PTHR11260|PTHR11260:SF178|SSF47616|SSF52833 METD_RS11785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 METD_RS11790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347 METD_RS11795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR015422|IPR015424|IPR029033 Aminotransferase, class I/classII|Histidine phosphatase superfamily|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.50.1240|G3DSA:3.90.1150.10|PF00155|PTHR13693|PTHR13693:SF53|SSF53254|SSF53383 METD_RS11830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF850|SSF53335 METD_RS11835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623|IPR007936|IPR027417 DnaJ domain|P-loop containing nucleoside triphosphate hydrolase|Virulence-associated E G3DSA:1.10.287.110|G3DSA:3.40.50.300|PF05272|SSF46565|SSF52540 METD_RS11840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000523|IPR004482|IPR025158|IPR027417 Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01078|PF13335|PTHR32039|PTHR32039:SF7|SSF52540 METD_RS11845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|PTHR11260:SF253|SSF47616|SSF52833 METD_RS11850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013702|IPR019494 FIST domain, N-terminal|FIST, C-domain PF08495|PF10442|PTHR40252|PTHR40252:SF2|SM00897|SM01204 METD_RS11855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF439|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 METD_RS11865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035|PTHR39327|PTHR39327:SF2 METD_RS11870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR11049|PTHR11049:SF5|SSF54637 METD_RS11875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|SSF53474 METD_RS11880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007730|IPR008258|IPR023346 Lysozyme-like domain|Sporulation-related domain|Transglycosylase SLT domain 1 GO:0042834 G3DSA:1.10.530.10|PF01464|PF05036|PTHR21666|PTHR21666:SF203|SSF53955 METD_RS11885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006656|IPR006657|IPR006963|IPR009010 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0030151|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PTHR11615|PTHR11615:SF127|SM00926|SSF50692|SSF53706 METD_RS11890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF574|SM00382|SSF52540 METD_RS11895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006124|IPR010045|IPR017849|IPR017850|IPR024052 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Metalloenzyme|Phosphopentomutase|Phosphopentomutase DeoB cap domain GO:0000287|GO:0003824|GO:0005737|GO:0008152|GO:0008973|GO:0009117|GO:0043094|GO:0046872 G3DSA:3.30.70.1250|G3DSA:3.40.720.10|MF_00740|PF01676|PIRSF001491|PTHR21110|PTHR21110:SF0|SSF143856|SSF53649|TIGR01696 METD_RS11900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF7|SM00382|SSF52540|TIGR03719 METD_RS11910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001604|IPR018524|IPR020821 DNA/RNA non-specific endonuclease|DNA/RNA non-specific endonuclease, active site|Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 G3DSA:3.40.570.10|PF01223|PS01070|PTHR13966|SM00477|SM00892|SSF54060 METD_RS11920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 METD_RS11925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040|IPR017829 Hopanoid-associated sugar epimerase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF124|SSF51735|TIGR03466 METD_RS11930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002060|IPR008949|IPR017827 Isoprenoid synthase domain|Squalene synthase HpnC|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|PTHR31480|PTHR31480:SF8|SSF48576|TIGR03464 METD_RS11935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002060|IPR008949|IPR017828|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase HpnD|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016117|GO:0016740|GO:0016765|GO:0016767 G3DSA:1.10.600.10|PF00494|PS01044|PTHR31480|PTHR31480:SF5|SSF48576|TIGR03465 METD_RS11940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR017830|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Squalene-associated FAD-dependent desaturase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF274|SSF51905|TIGR03467 METD_RS11945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002365|IPR006400|IPR008930|IPR018333|IPR032696|IPR032697 Squalene cyclase|Squalene cyclase, C-terminal|Squalene cyclase, N-terminal|Squalene hopene cyclase|Terpene synthase, conserved site|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0016866|GO:0019746 G3DSA:1.50.10.20|PF13243|PF13249|PS01074|PTHR11764|PTHR11764:SF12|SSF48239|TIGR01507|TIGR01787 METD_RS11950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PTHR11558|PTHR11558:SF4|SSF53335 METD_RS11955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR13693|SSF53383 METD_RS11960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001227|IPR002364|IPR006162|IPR009081|IPR011032|IPR013149|IPR013968|IPR014030|IPR014031|IPR014043|IPR016035|IPR016036|IPR016039|IPR016040|IPR018201|IPR020801|IPR020806|IPR020807|IPR020841|IPR020843|IPR029063|IPR032821 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Alcohol dehydrogenase, C-terminal|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|GroES-like|Ketoacyl-synthetase, C-terminal extension|Malonyl-CoA ACP transacylase, ACP-binding|NAD(P)-binding domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, acyl transferase domain|Polyketide synthase, beta-ketoacyl synthase domain|Polyketide synthase, dehydratase domain|Polyketide synthase, enoylreductase domain|Polyketide synthase, ketoreductase domain|Polyketide synthase, phosphopantetheine-binding domain|Quinone oxidoreductase/zeta-crystallin, conserved site|S-adenosyl-L-methionine-dependent methyltransferase|Thiolase-like GO:0003824|GO:0008152|GO:0008270|GO:0016491|GO:0016740|GO:0031177|GO:0055114 G3DSA:1.10.1200.10|G3DSA:3.30.70.250|G3DSA:3.40.366.10|G3DSA:3.40.47.10|G3DSA:3.40.50.150|G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF00109|PF00550|PF00698|PF02801|PF08659|PF14765|PF16197|PS00012|PS00606|PS01162|PTHR11712|SM00822|SM00823|SM00825|SM00826|SM00827|SM00829|SSF47336|SSF50129|SSF51735|SSF52151|SSF53335|SSF53901|SSF55048 METD_RS11965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 METD_RS11970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PF13641|PTHR22916|SSF53448 METD_RS11985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF3|SSF103473|TIGR04259 METD_RS11990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010628|IPR013785 Aldolase-type TIM barrel|Ethanolamine ammonia lyase large subunit GO:0003824|GO:0006520|GO:0008851 G3DSA:1.10.220.70|G3DSA:2.30.170.30|G3DSA:3.20.20.70|PF06751|PIRSF018788|PTHR39329|PTHR39329:SF1 METD_RS11995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 PF05985|PIRSF018982|PTHR39330 METD_RS12000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF5|SSF143975|SSF52016|TIGR00110 METD_RS12005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 METD_RS12010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004808|IPR005135|IPR020847|IPR020848 AP endonuclease 1|AP endonuclease 1, binding site|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PS00728|PTHR22748|PTHR22748:SF9|SSF56219|TIGR00195|TIGR00633 METD_RS12015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008901 Ceramidase GO:0006672|GO:0016021|GO:0016811 PF05875 METD_RS12020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PF16177|PS00455|PTHR24095|PTHR24095:SF167|SSF56801 METD_RS12025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007420 Protein of unknown function DUF465 PF04325 METD_RS12030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|PTHR23046:SF2|SM01001|SSF52255|TIGR01162 METD_RS12035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|PTHR11609|PTHR11609:SF5|SSF51246|SSF52440|SSF56059|TIGR01161 METD_RS12040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13414|PTHR23083|SM00028|SSF48452 METD_RS12045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 METD_RS12050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 G3DSA:3.30.540.10|PF03320|PIRSF004532|PTHR30447|PTHR30447:SF0|SSF56655|TIGR00330 METD_RS12055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|PTHR21499|PTHR21499:SF2|SSF51735|SSF55021|SSF55347 METD_RS12075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002668|IPR008276|IPR011657 Concentrative nucleoside transporter|Concentrative nucleoside transporter C-terminal domain|Concentrative nucleoside transporter N-terminal domain GO:0005337|GO:0016020|GO:1901642 PF01773|PF07662|PTHR10590 METD_RS12080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06325|PTHR18895|PTHR18895:SF3|SSF53335 METD_RS12090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13477|PF13692|PTHR12526|SSF53756 METD_RS12095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001631|IPR011010|IPR013500|IPR014711|IPR027362 DNA breaking-rejoining enzyme, catalytic core|DNA topoisomerase I|DNA topoisomerase I catalytic fragment, domain 2|DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type|DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0003918|GO:0006265 G3DSA:1.20.120.380|G3DSA:3.90.15.10|PF01028|PR00416|SSF55869|SSF56349 METD_RS12100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|SSF58104 METD_RS12105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PIRSF006446|PTHR30365|PTHR30365:SF8 METD_RS12110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SSF46894 METD_RS12115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 METD_RS12130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PF03239|PTHR31632|PTHR31632:SF4 METD_RS12135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|PTHR11717|PTHR11717:SF18|SM00226|SSF52788 METD_RS12140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008321 Uncharacterised conserved protein UCP032146 MF_00678|PF06793|PIRSF032146 METD_RS12145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|PTHR21256|SSF53720|TIGR00069 METD_RS12150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021335 Protein of unknown function DUF2948 PF11164 METD_RS12160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|SSF55205|TIGR01072 METD_RS12165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001917|IPR004839|IPR010961|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003824|GO:0003870|GO:0008152|GO:0009058|GO:0016740|GO:0030170|GO:0033014 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|PTHR13693|PTHR13693:SF57|SSF53383|TIGR01821 METD_RS12180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018637 Domain of unknown function DUF2059 PF09832 METD_RS12185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013988 PhnA protein, C-terminal G3DSA:2.30.30.40|PF03831|PTHR30305|PTHR30305:SF3|SSF82057 METD_RS12190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|SM00849|SSF56281 METD_RS12195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|SM00421|SSF46894 METD_RS12200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 PF01474|PTHR21337|SSF51569|TIGR01358 METD_RS12215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|PTHR30636|TIGR00255 METD_RS12220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|PTHR23117|PTHR23117:SF13|SM00072|SSF52540|TIGR03263 METD_RS12225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF240|SM00382|SSF52540|SSF90123 METD_RS12230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS12235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000415|IPR012825|IPR029479 5,6-dimethylbenzimidazole synthase BluB|Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|SSF55469|TIGR02476 METD_RS12240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021252 Protein of unknown function DUF2794 PF10984 METD_RS12245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF10|SSF56935|TIGR01783 METD_RS12250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000887|IPR013785|IPR031337|IPR031338 Aldolase-type TIM barrel|KDPG/KHG aldolase|KDPG/KHG aldolase, active site 1|KDPG/KHG aldolase, active site 2 GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF01081|PS00159|PS00160|PTHR30246|PTHR30246:SF0|SSF51569|TIGR01182 METD_RS12255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000581|IPR004786|IPR015928|IPR020558 6-phosphogluconate dehydratase|Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004456|GO:0008152|GO:0009255 PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF9|SSF143975|SSF52016|TIGR01196 METD_RS12260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000397|IPR016153|IPR016154 Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 G3DSA:3.55.30.10|G3DSA:3.90.1280.10|PF01430|PIRSF005261|PTHR30111|PTHR30111:SF1|SSF118352|SSF64397 METD_RS12265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005546|IPR007049|IPR011250|IPR027385 Autotransporter beta-domain|Carbohydrate-selective porin OprB|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0005215|GO:0006810|GO:0016021 G3DSA:2.40.160.20|PF04966|PF13505|PTHR34001|SSF103515 METD_RS12270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917|PTHR36919|PTHR36919:SF2 METD_RS12275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PTHR11349|SM00562|SSF54919 METD_RS12285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF10 METD_RS12290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010295 Protein of unknown function DUF898 PF05987 METD_RS12295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007423 Protein of unknown function DUF466 PF04328|PTHR38453|PTHR38453:SF1 METD_RS12300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722|PTHR30252|PTHR30252:SF2 METD_RS12310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007621 TPM domain PF04536|PTHR30373|PTHR30373:SF2 METD_RS12315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007156|IPR023353 LemA|LemA-like domain G3DSA:1.20.1440.20|PF04011|PTHR34478|PTHR34478:SF2|SSF140478 METD_RS12320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011893|IPR012336 Selenoprotein, Rdx type|Thioredoxin-like fold G3DSA:3.40.30.10|PF10262|PTHR36417|PTHR36417:SF1|SSF52833|TIGR02174 METD_RS12325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR011102|IPR013655 PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|PF07536|PF08447|PTHR41523|PTHR41523:SF4|SM00091|SM00911|SSF55785|TIGR00229 METD_RS12330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR018170|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase, conserved site|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PIRSF000097|PR00069|PS00063|PS00798|PTHR11732|SSF51430 METD_RS12335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS12340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF295|SSF53756|TIGR02095 METD_RS12345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006047|IPR013780|IPR013781|IPR015902|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PF11941|PTHR10357|PTHR10357:SF167|SM00642|SSF51011|SSF51445 METD_RS12350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000811|IPR011833 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|PTHR11468|PTHR11468:SF3|SSF53756|TIGR02093 METD_RS12355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:2.40.30.10|G3DSA:3.40.50.80|SSF52343 METD_RS12365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013655|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08447|PTHR10799|PTHR10799:SF710|SM00052|SM00086|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 METD_RS12370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953|PTHR22926|PTHR22926:SF3 METD_RS12375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF329|SSF51735 METD_RS12380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003680|IPR023048|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain|NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 G3DSA:3.40.50.360|MF_01216|PF02525|PTHR10204|PTHR10204:SF37|SSF52218 METD_RS12385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|PTHR33204|PTHR33204:SF6|SSF46785 METD_RS12390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|PTHR10366|PTHR10366:SF256|SSF51735 METD_RS12395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009597 Domain of unknown function DUF1206 PF06724 METD_RS12405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 METD_RS12410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 METD_RS12415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005097|IPR016040|IPR023181|IPR032095 Homospermidine synthase-like, domain|NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.30.360.30|G3DSA:3.40.50.720|PF03435|PF16653 METD_RS12425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|PTHR23091|PTHR23091:SF237|SSF55729 METD_RS12430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000183|IPR002433|IPR009006|IPR022643|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine decarboxylase|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0006596 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PR01179|PR01182|PS00878|PTHR11482|PTHR11482:SF6|SSF50621|SSF51419 METD_RS12435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007444|IPR011013|IPR013783|IPR014438|IPR014718|IPR014756 Galactose mutarotase-like domain|Glucan biosynthesis, periplasmic, MdoG C-terminal|Glucan biosynthesis, periplasmic, MdoG/D|Glycoside hydrolase-type carbohydrate-binding, subgroup|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0005975|GO:0016051|GO:0030246|GO:0042597 G3DSA:2.60.40.10|G3DSA:2.70.98.10|PF04349|PIRSF006281|PTHR30504|SSF74650|SSF81296 METD_RS12440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 METD_RS12445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF14|SSF51395 METD_RS12450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF41|SSF56784 METD_RS12455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PF04355 METD_RS12460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007129|IPR014569|IPR021150 Ubiquinol-cytochrome c chaperone, CBP3|Ubiquinol-cytochrome c chaperone, CBP3-related|Ubiquinol-cytochrome c chaperone/UPF0174 PF03981|PIRSF032079|PTHR12184|PTHR12184:SF2 METD_RS12465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003772 Protein of unknown function DUF177 PF02620 METD_RS12470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|PTHR30100|PTHR30100:SF1|SSF53659|TIGR00182 METD_RS12475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR18919|PTHR18919:SF109|SSF53901|TIGR00747 METD_RS12480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000119|IPR005684|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|PTHR33175|PTHR33175:SF2|SM00411|SSF47729 METD_RS12485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF15|SM00422|SSF46955 METD_RS12500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010650|IPR013153|IPR016230|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PrkA AAA domain|PrkA C-terminal domain|Serine-protein kinase, PrkA GO:0004672 G3DSA:3.40.50.300|PF06798|PF08298|PIRSF000549|PTHR30267|PTHR30267:SF2|SM00763|SSF52540 METD_RS12505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006698 Uncharacterised protein family UPF0229 MF_01232|PF04285|PTHR30510 METD_RS12510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007390 Sporulation stage V, protein R PF04293|PTHR30029|PTHR30029:SF2 METD_RS12515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PTHR10520|PTHR10520:SF10|SSF53328|TIGR00639 METD_RS12520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|PTHR10520|SSF55326|SSF56042|TIGR00878 METD_RS12530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716 METD_RS12535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.8.60|G3DSA:3.40.50.300|PTHR30050|PTHR30050:SF5|SSF52540 METD_RS12540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 METD_RS12545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003695|IPR022371 Exopolyphosphatase|Ppx/GppA phosphatase GO:0004309|GO:0006793 G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PTHR30005|PTHR30005:SF4|SSF109604|SSF53067|TIGR03706 METD_RS12555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 METD_RS12560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|G3DSA:3.40.810.20|PF01144|PTHR13707|PTHR13707:SF38|SM00882|SSF100950 METD_RS12565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF158472|SSF58104 METD_RS12570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|PTHR12534|SSF52313|TIGR01011 METD_RS12575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01127|PTHR11741|SSF46934|SSF54713|TIGR00116 METD_RS12580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF23|SSF53633|TIGR02075 METD_RS12585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|MF_00209|PF00719|PTHR10286|SSF50324 METD_RS12590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 METD_RS12595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026893|IPR029021 Protein-tyrosine phosphatase-like|Tyrosine/serine-protein phosphatase IphP-type G3DSA:3.90.190.10|PF13350|SSF52799 METD_RS12605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR007691|IPR011004|IPR018357|IPR020573 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016740|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PS00101|PTHR22572|PTHR22572:SF117|SSF51161|TIGR01853 METD_RS12610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|MF_01430|PF01103|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF11|TIGR03303 METD_RS12615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|PTHR22939|PTHR22939:SF78|SM00228|SSF50156|TIGR00054 METD_RS12620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|SSF51735|SSF55347|SSF69055|TIGR00243 METD_RS12625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315|PTHR13773|PTHR13773:SF0 METD_RS12630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 METD_RS12635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 METD_RS12640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR007065 CBS domain|HPP G3DSA:3.10.580.10|PF00571|PF04982|PTHR33741|SM00116|SSF54631 METD_RS12645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR010971|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF5|SSF51905|TIGR01988 METD_RS12650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF8|SSF46785|SSF53850 METD_RS12655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 METD_RS12660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005474|IPR029061|IPR033247 Thiamin diphosphate-binding fold|Transketolase family|Transketolase, N-terminal G3DSA:3.40.50.970|PF00456|PTHR11624|PTHR11624:SF86|SSF52518 METD_RS12665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF02779|PF02780|PTHR11624|PTHR11624:SF2|SM00861|SSF52518|SSF52922 METD_RS12670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004682|IPR018389 TRAP transporter solute receptor DctP/TeaA|TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 PF03480|PIRSF006470|PTHR33376|PTHR33376:SF4|TIGR00787 METD_RS12675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004681|IPR007387|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein|Tripartite ATP-independent periplasmic transporter, DctQ component GO:0016021 PF04290|PF06808|PTHR33362|PTHR33362:SF8|TIGR00786 METD_RS12685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003644|IPR005135|IPR008334|IPR011049|IPR015943|IPR016202|IPR018511|IPR029052|IPR032812 5'-Nucleotidase, C-terminal|Deoxyribonuclease I|Endonuclease/exonuclease/phosphatase|Hemolysin-type calcium-binding conserved site|Metallo-dependent phosphatase-like|Na-Ca exchanger/integrin-beta4|SbsA, Ig-like domain|Serralysin-like metalloprotease, C-terminal|WD40/YVTN repeat-like-containing domain GO:0004536|GO:0005515|GO:0006308|GO:0007154|GO:0009166|GO:0016021|GO:0016787 G3DSA:2.130.10.10|G3DSA:2.150.10.10|G3DSA:3.60.10.10|G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF02872|PF03160|PF03372|PF13205|PS00330|PTHR11371|PTHR11371:SF31|SSF141072|SSF51120|SSF55816|SSF56219|SSF56300|SSF63825 METD_RS12690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003703|IPR029069 Acyl-CoA thioesterase|HotDog domain GO:0006637|GO:0047617 G3DSA:3.10.129.10|PF13622|PTHR11066|PTHR11066:SF34|SSF54637 METD_RS12695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|PTHR30115|PTHR30115:SF15|SM00938|SSF54913 METD_RS12700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001905|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|PTHR11730|PTHR11730:SF17|SSF111352|TIGR00836 METD_RS12705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 PF07642|SSF56935 METD_RS12710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002543|IPR003593|IPR011991|IPR018541|IPR025199|IPR027417 AAA+ ATPase domain|DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PTHR22683|PTHR22683:SF41|SM00382|SM00843|SSF46785|SSF52540 METD_RS12715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF19|SSF56935 METD_RS12720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR011102|IPR013655|IPR013656 PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|PF07536|PF08447|PF08448|PTHR41523|SM00086|SM00091|SM00911|SSF55785|TIGR00229 METD_RS12725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 METD_RS12730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006656|IPR009010|IPR010046 Aspartate decarboxylase-like domain|Molybdopterin oxidoreductase|Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PIRSF000144|PTHR11615|PTHR11615:SF114|SSF50692|SSF53706|TIGR01701 METD_RS12735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001295|IPR005719|IPR005720|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|PF01180|PS00912|PTHR11938|PTHR11938:SF47|SSF51395|TIGR01036 METD_RS12740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009297 Protein of unknown function DUF952 PF06108|PTHR34129|PTHR34129:SF1|SSF56399 METD_RS12745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010982|IPR015927|IPR019759|IPR028360 Lambda repressor-like, DNA-binding domain|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677 G3DSA:1.10.260.40|G3DSA:2.10.109.10|PF00717|SSF51306 METD_RS12755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021473 Protein of unknown function DUF3126 PF11324 METD_RS12760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR005881|IPR010493|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Serine acetyltransferase, N-terminal|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PF06426|PS00101|PTHR23416|PTHR23416:SF2|SM00971|SSF51161|TIGR01172 METD_RS12765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000623|IPR001387|IPR010982|IPR027417|IPR031322 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.40.50.300|MF_00109|PF01202|PF13560|PR01100|PTHR21087|PTHR21087:SF0|SM00530|SSF47413|SSF52540 METD_RS12770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SSF47384|SSF55874 METD_RS12785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF497|SM00448|SM00862|SSF46894|SSF52172 METD_RS12790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR021800|IPR029016 CheY-like superfamily|Domain of unknown function DUF3369|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF11849|PR00344|PTHR24423|PTHR24423:SF482|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55874 METD_RS12795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|SSF54593 METD_RS12800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF02492|PTHR13748|SSF52540 METD_RS12805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF22|SM00100|SSF46785|SSF51206 METD_RS12810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219|PTHR34219:SF2 METD_RS12825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|PTHR19372|SSF56524 METD_RS12830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001433|IPR001709|IPR001834|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PR00406|PTHR19370|SSF52343|SSF63380 METD_RS12835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid PF09538|TIGR02300 METD_RS12845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|PTHR21090|PTHR21090:SF5|SSF55205|TIGR01356 METD_RS12850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PTHR21299|SSF52540|TIGR00017 METD_RS12855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003746 Protein of unknown function DUF167 G3DSA:3.30.1200.10|MF_00634|PF02594|PTHR13420|SM01152|SSF69786 METD_RS12865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 METD_RS12870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002213|IPR004276 Glycosyltransferase family 28, N-terminal domain|UDP-glucuronosyl/UDP-glucosyltransferase GO:0005975|GO:0008152|GO:0016758|GO:0030259 G3DSA:3.40.50.2000|PF00201|PF03033|PTHR11926|PTHR11926:SF394|SSF53756 METD_RS12875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003785|IPR024087 Creatininase-like domain|Creatininase/formamide hydrolase G3DSA:3.40.50.10310|PF02633|PTHR35005|PTHR35005:SF1|SSF102215 METD_RS12880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001610|IPR013656|IPR029787 GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4 G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF08448|PTHR24423|PTHR24423:SF383|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 METD_RS12885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462|IPR017756 CsbD-like|Transmembrane Gly-Cys-Arg, conserved site G3DSA:1.10.1470.10|SSF69047|TIGR03382 METD_RS12890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 METD_RS12895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846|IPR026355 Major facilitator superfamily|Major facilitator superfamily domain|Oxalate/formate antiporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF3|SSF103473|TIGR04259 METD_RS12900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011234|IPR018833 Domain of unknown function DUF2437|Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PF10370|PTHR11820|PTHR11820:SF6|SSF56529 METD_RS12905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|PTHR21708|PTHR21708:SF29|SSF48179|SSF51735|TIGR00745 METD_RS12910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 METD_RS12930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23505|PTHR23505:SF8|SSF103473 METD_RS12935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|SSF46785|SSF53850 METD_RS12940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.10|PF14552|PTHR38460|PTHR38460:SF1|SSF55331 METD_RS12945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|PTHR32308:SF0|SSF51621 METD_RS12955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR18901|SSF56784|TIGR01549 METD_RS12965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025449 Protein of unknown function DUF4194 PF13835 METD_RS12970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS12975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR36110|PTHR36110:SF2|SSF54593 METD_RS12980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|PTHR10655|PTHR10655:SF23|SSF53474 METD_RS12990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1140.10|PF13555|PF13558|SSF52540 METD_RS12995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 METD_RS13000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|SSF47973|TIGR01029 METD_RS13005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 METD_RS13010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 METD_RS13015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 METD_RS13020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 METD_RS13025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953 METD_RS13030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001014|IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L23/L25, conserved site|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PS00050|PTHR11620|SSF54189 METD_RS13035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|PTHR13691:SF5|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 METD_RS13040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 METD_RS13045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|PTHR13501|SSF54843|TIGR01044 METD_RS13050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 METD_RS13055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|PTHR12220|SSF54686|TIGR01164 METD_RS13060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PTHR10916|SSF46561|TIGR00012 METD_RS13065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000266|IPR012340|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PTHR10744|SSF50249|TIGR03635 METD_RS13070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR23077|SM00382|SSF52540 METD_RS13075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR12629|PTHR12629:SF0|SSF55811 METD_RS13080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|PTHR33164:SF5|SM00347|SSF46785 METD_RS13085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PTHR14413|PTHR14413:SF5|SSF64263|TIGR00059 METD_RS13090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 METD_RS13095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR23200|PTHR23200:SF46|SM00849|SSF56281 METD_RS13100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 METD_RS13105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001892|IPR010979|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PTHR10871|SSF46946|TIGR03631 METD_RS13110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000850|IPR006259|IPR027417 Adenylate kinase subfamily|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|PTHR23359|SSF52540|TIGR01351 METD_RS13115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 METD_RS13120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|PTHR12934|SSF52080|TIGR01071 METD_RS13125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005996|IPR016082 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|PTHR15892|PTHR15892:SF2|SSF55129|TIGR01308 METD_RS13130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 METD_RS13135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 METD_RS13140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 METD_RS13145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|PTHR11758|PTHR11758:SF4|SSF56047 METD_RS13150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001209|IPR018271|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid|Ribosomal protein S14, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PS00527|PTHR19836|SSF57716 METD_RS13155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|PTHR11994|SSF55282 METD_RS13160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|PTHR12903|SM00739|SSF50104|TIGR01079 METD_RS13165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 METD_RS13175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|SM00318|SSF50199 METD_RS13185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS13190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000326|IPR026841 Inositolphosphotransferase Aur1/Ipt1|Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF14378 METD_RS13220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF212|SSF51905|SSF54373 METD_RS13225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019401 Zinc finger, CHCC-type G3DSA:2.60.260.40|PF10276 METD_RS13230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021354 Protein of unknown function DUF2975 PF11188 METD_RS13235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|PTHR37301|SM00530|SSF47413 METD_RS13240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478 PDZ domain GO:0005515 G3DSA:2.30.42.10|SSF50156 METD_RS13245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|PTHR10804|PTHR10804:SF82|SSF55920|TIGR00500 METD_RS13250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001405|IPR010994|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|RuvA domain 2-like|Uncharacterised protein family UPF0758, conserved site G3DSA:1.10.150.20|G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF3|SSF102712|SSF47781|TIGR00608 METD_RS13255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016450|IPR025841 Circularly permuted ATP-grasp type 2|Uncharacterised conserved protein UCP005522 PF14403|PIRSF005522|PTHR34595|PTHR34595:SF3|SSF56059 METD_RS13260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007296 Domain of unknown function DUF403 PF04168|PTHR34595 METD_RS13285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PTHR33490|PTHR33490:SF5|SM00460|SSF54001 METD_RS13290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016545|IPR029055 Nucleophile aminohydrolases, N-terminal|Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 G3DSA:3.60.20.10|PIRSF009120|SSF56235 METD_RS13295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003000|IPR026591|IPR027546|IPR029035 DHS-like NAD/FAD-binding domain|Sirtuin family|Sirtuin family, catalytic core small domain|Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 G3DSA:3.30.1600.10|G3DSA:3.40.50.1220|MF_01121|PF02146|PTHR11085|SSF52467 METD_RS13300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM00116|SM01091|SSF54631|SSF56176 METD_RS13305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.40.50.2000|G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF26|SSF53448|SSF53756 METD_RS13320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF93|SM00228|SSF50156|SSF50494|TIGR02037 METD_RS13325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018968 Phasin PF09361 METD_RS13330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 METD_RS13335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 METD_RS13340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|SSF53756 METD_RS13350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13188|PTHR10799|PTHR10799:SF657|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 METD_RS13355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00073|PTHR10909|SSF47203|SSF56645 METD_RS13360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR32322|PTHR32322:SF11|SSF103481 METD_RS13365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875|PTHR30213|PTHR30213:SF1|TIGR00765 METD_RS13370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR031811 AlgX, SGNH hydrolase-like domain PF16822 METD_RS13375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000795|IPR009000|IPR009001|IPR011779|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Sulphate adenylyltransferase, large subunit|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0006790 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00062|PF00009|PR00315|PS00301|PTHR23115|SSF50447|SSF50465|SSF52540|TIGR02034 METD_RS13380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002500|IPR011784|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase, small subunit GO:0003824|GO:0004781|GO:0008152|GO:0019419 G3DSA:3.40.50.620|MF_00064|PF01507|PIRSF002936|PTHR23293|PTHR23293:SF6|SSF52402|TIGR02039 METD_RS13385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002500|IPR004511|IPR011798|IPR014729 Adenosine 5'-phosphosulphate reductase|Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0008152|GO:0019344|GO:0019379|GO:0055114 G3DSA:3.40.50.620|PF01507|PIRSF000857|PTHR23293|PTHR23293:SF11|SSF52402|TIGR02055 METD_RS13390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000485|IPR011008|IPR011991|IPR019885|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Transcription regulator HTH, AsnC-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PS00519|PTHR30154|PTHR30154:SF17|SM00344|SSF46785|SSF54909 METD_RS13395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001094|IPR001433|IPR001709|IPR003097|IPR008254|IPR010199|IPR017938|IPR023173|IPR029039 FAD-binding, type 1|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like domain|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel|Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0016491|GO:0019344|GO:0050660|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|PF00175|PF00258|PF00667|PIRSF000207|PR00369|PR00371|PTHR19384|SSF52218|SSF52343|SSF63380 METD_RS13400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005117|IPR006066|IPR006067|IPR011786 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site|Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0016491|GO:0020037|GO:0050661|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|MF_01540|PF01077|PF03460|PR00397|PS00365|PTHR11493|PTHR11493:SF47|SSF55124|SSF56014|TIGR02041 METD_RS13405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF6|SSF56935|TIGR01783 METD_RS13410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003721|IPR004821|IPR014729 Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004592|GO:0009058|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|PTHR21299|PTHR21299:SF1|SSF52374|TIGR00018|TIGR00125 METD_RS13420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF13560|PTHR10245|PTHR10245:SF9|SM00530|SSF47413|SSF51182 METD_RS13425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PTHR10302|PTHR10302:SF0|SSF50249|TIGR00621 METD_RS13430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF16884|PTHR11695|PTHR11695:SF557|SM00829|SSF50129|SSF51735 METD_RS13435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025232 Domain of unknown function DUF4174 PF13778 METD_RS13445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018711 Phosphodiester glycosidase PF09992 METD_RS13450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF7|SSF51395 METD_RS13465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005746|IPR011990|IPR012336|IPR013766|IPR017937 Tetratricopeptide-like helical domain|Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0005515|GO:0006662|GO:0015035|GO:0045454 G3DSA:1.25.40.10|G3DSA:3.40.30.10|PF00085|PF14559|PF14561|PS00194|PTHR10438|PTHR10438:SF282|SSF48452|SSF52833 METD_RS13470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003111|IPR015947|IPR027065 ATP-dependent protease La (LON), substrate-binding domain|Lon protease|PUA-like domain GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 PF02190|PTHR10046|SM00464|SSF88697 METD_RS13475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005651 Uncharacterised protein family UPF0434/Trm112 G3DSA:2.20.25.10|MF_01187|PF03966|PTHR33505|SSF158997 METD_RS13480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain PF04280|PTHR41542|PTHR41542:SF1|SM00978|SSF54427 METD_RS13485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF544|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS13490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035|PTHR39327|PTHR39327:SF2 METD_RS13495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035|PTHR39327|PTHR39327:SF2 METD_RS13500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 METD_RS13505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009922 Protein of unknown function DUF1457 PF07310|PIRSF031878 METD_RS13510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 METD_RS13520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 METD_RS13525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR14226|PTHR14226:SF24|SSF52151 METD_RS13530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|PTHR21256|SSF141734 METD_RS13535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001474|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PTHR11109|SSF55620|TIGR00063 METD_RS13540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|SSF82649 METD_RS13545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|PTHR33383|SM01234|TIGR00278 METD_RS13550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006214 Bax inhibitor 1-related PF01027|PTHR23291|PTHR23291:SF42 METD_RS13555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30287 METD_RS13560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF445|SM00387|SSF47384|SSF55874 METD_RS13565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|PTHR30456|PTHR30456:SF0|SSF63892|TIGR00559 METD_RS13570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002582|IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 METD_RS13575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000223|IPR015927|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00760|PS00761|PTHR12383|PTHR12383:SF27|SSF51306|TIGR02227 METD_RS13580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 METD_RS13585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436 METD_RS13590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002052|IPR007848|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF05175|PS00092|PTHR18895|PTHR18895:SF70|SSF53335 METD_RS13595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF19|SM00363|SSF55120|SSF55174|TIGR00093 METD_RS13605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 METD_RS13620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003855|IPR023051 Potassium transporter|Potassium uptake protein, low affinity, Kup GO:0015079|GO:0016020|GO:0071805 MF_01522|PF02705|PTHR30540|PTHR30540:SF7 METD_RS13625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021330 Protein of unknown function DUF2939 PF11159 METD_RS13630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797|IPR020084|IPR022927 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|PS00893|PTHR11839|PTHR11839:SF13|SSF55811 METD_RS13635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS13640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002509|IPR006837|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|Protein of unknown function DUF610, YibQ GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04748|PTHR30105|SSF88713 METD_RS13645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|PTHR32060|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 METD_RS13650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF204|SSF51261 METD_RS13655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003742|IPR029026|IPR029028 Alpha/beta knot methyltransferases|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|PTHR33603|PTHR33603:SF1|SSF75217 METD_RS13660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005828|IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PF07690|PS00216|PS00217|PTHR23508|PTHR23508:SF13|SSF103473 METD_RS13665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PTHR33121|PTHR33121:SF13|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 METD_RS13670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001853|IPR012336|IPR014440 DSBA-like thioredoxin domain|HCCA isomerase/glutathione S-transferase kappa|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF006386|PTHR13887|PTHR13887:SF22|SSF52833 METD_RS13675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|PTHR11587|PTHR11587:SF2|SSF52402|SSF69864|TIGR00032 METD_RS13680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025538 Domain of unknown function DUF4424 PF14415 METD_RS13690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|PTHR18901:SF14|SSF56784|TIGR01449|TIGR01549 METD_RS13700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|SSF100950|SSF75445|TIGR00021 METD_RS13705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018637 Domain of unknown function DUF2059 PF09832 METD_RS13710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007016 O-antigen ligase-related PF04932 METD_RS13715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF106|SSF51905|SSF55424 METD_RS13720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|SSF53850 METD_RS13725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|PF02631 METD_RS13730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946|IPR019904 K homology domain-like, alpha/beta|OsmC/Ohr family|Peroxiredoxin OsmC GO:0004601|GO:0006979 G3DSA:3.30.300.20|PF02566|PTHR33797|PTHR33797:SF1|SSF82784|TIGR03562 METD_RS13735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006638|IPR010994|IPR023404|IPR023874 DNA modification/repair radical SAM protein, putative|Elongator protein 3/MiaB/NifB|Radical SAM, alpha/beta horseshoe|RuvA domain 2-like GO:0003824|GO:0051536 G3DSA:1.10.150.280|G3DSA:3.80.30.20|PTHR21180|PTHR21180:SF9|SM00729|SSF102114|SSF47781|TIGR03916 METD_RS13740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005122|IPR005273|IPR023875|IPR025404 DNA metabolism protein, putative|Domain of unknown function DUF4130|Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PF13566|PTHR33693|PTHR33693:SF3|SM00986|SM00987|SSF52141|TIGR03914|TIGR03915 METD_RS13745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR027399 Alcohol dehydrogenase GroES-associated|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PF13823|PTHR11695|PTHR11695:SF281|SSF50129|SSF51735 METD_RS13755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019285 Protein of unknown function DUF2336 PF10098 METD_RS13760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 METD_RS13765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005000|IPR015813 HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|SSF51621 METD_RS13770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|PTHR11260:SF143|SSF47616|SSF52833 METD_RS13780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011614|IPR018028|IPR020835|IPR024168 Catalase core domain|Catalase, SrpA-type, predicted|Catalase, mono-functional, haem-containing|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PIRSF000296|PR00067|PTHR11465|PTHR11465:SF16|SM01060|SSF56634 METD_RS13785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR33798|SM00903|SSF50475 METD_RS13790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000415|IPR026021|IPR029479 Nitroreductase|Nitroreductase-like|Putative NAD(P)H nitroreductase YdjA-like GO:0016491 G3DSA:3.40.109.10|PF00881|PIRSF000232|PTHR23026|PTHR23026:SF107|SSF55469 METD_RS13805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PTHR11751|PTHR11751:SF386|SM00345|SSF46785|SSF53383 METD_RS13810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002314|IPR002320|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF31|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 METD_RS13820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000600 ROK family G3DSA:3.30.420.40|PF00480|PS01125|PTHR18964|PTHR18964:SF134|SSF53067 METD_RS13825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00714|PTHR11958|PTHR11958:SF49|SSF118215 METD_RS13830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF11|SSF47323|SSF50677|SSF52374|TIGR00392 METD_RS13835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|PTHR33695|PTHR33695:SF1|TIGR00077 METD_RS13845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF136|SSF63411 METD_RS13850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007863|IPR011237|IPR011249 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF05193|PTHR11851|PTHR11851:SF140|SSF63411 METD_RS13855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR36110|PTHR36110:SF3|SSF54593 METD_RS13860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001433|IPR001709|IPR008333|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PR00371|PTHR19370|PTHR19370:SF98|SSF52343|SSF63380 METD_RS13865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|PTHR21343|PTHR21343:SF0|SSF52540|TIGR00347 METD_RS13875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF438|SM00448|SSF52172 METD_RS13880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912|PTHR37314 METD_RS13885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001680|IPR011042|IPR011047|IPR015943|IPR024977 Anaphase-promoting complex subunit 4, WD40 domain|Quinoprotein alcohol dehydrogenase-like superfamily|Six-bladed beta-propeller, TolB-like|WD40 repeat|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.120.10.30|G3DSA:2.130.10.10|PF00400|PF12894|SM00320|SSF50998 METD_RS13895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022584 Protein of unknown function DUF2937 PF11157 METD_RS13905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010428|IPR024079 Metallopeptidase, catalytic domain|Zinicin-like metallopeptidase GO:0008237 G3DSA:3.40.390.10|PF06262|PTHR41522|SSF55486 METD_RS13910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR010237|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Pyrimidine 5-nucleotidase GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR12725|PTHR12725:SF79|SSF56784|TIGR01509|TIGR01993 METD_RS13915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_A|MF_00082_B|PF00696|PIRSF000728|PR00474|PTHR23342|SSF53633|TIGR00761 METD_RS13925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005302|IPR005303|IPR011037|IPR015808 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03476|PTHR14237|PTHR14237:SF3|SSF50800 METD_RS13930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005302|IPR005303|IPR011037|IPR015808 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03476|PTHR14237|SSF50800 METD_RS13935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 METD_RS13940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR24032|SSF56300 METD_RS13945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006160 Short chain fatty acid transporter AtoE PF02667|PTHR41983|PTHR41983:SF1 METD_RS13950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006696 Protein of unknown function DUF423 PF04241 METD_RS13955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0000917|GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|PTHR11649|SSF52540|TIGR03598 METD_RS13960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PR01900|PTHR12428|PTHR12428:SF14|TIGR03592|TIGR03593 METD_RS13965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PF00825|PS00648|PTHR33992|SSF54211|TIGR00188 METD_RS13970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|PTHR14503|TIGR01030 METD_RS13975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010848 Protein of unknown function DUF1465 PF07323 METD_RS13980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PF01197|PR01249|PS01143|PTHR33280|SSF143800|TIGR00105 METD_RS13985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR011918|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, ATP-binding/permease protein|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123|TIGR02204 METD_RS13990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001926|IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PIRSF006278|PTHR10314|PTHR10314:SF105|SSF53686 METD_RS13995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30329|PTHR30329:SF4|SSF103088 METD_RS14000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 METD_RS14005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005235|IPR029052 Metallo-dependent phosphatase-like|Metallophosphoesterase, YmdB-like G3DSA:3.60.21.30|PF13277|PIRSF004789|PTHR36303|PTHR36303:SF1|SSF56300|TIGR00282 METD_RS14010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 METD_RS14015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007838 Cell division protein ZapA-like PF05164|PTHR34981|PTHR34981:SF1|SSF102829 METD_RS14020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025310 Protein of unknown function DUF4164 PF13747 METD_RS14025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|PTHR10836:SF50|SM00846|SSF51735|SSF55347|TIGR01534 METD_RS14030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.20.5.340 METD_RS14035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748 METD_RS14040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|PTHR30304|SSF51569|TIGR00167|TIGR01521 METD_RS14045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|PF02581|SSF51391 METD_RS14050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 METD_RS14055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060|PTHR11785|PTHR11785:SF328 METD_RS14060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000631|IPR004443|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153|TIGR00196|TIGR00197 METD_RS14065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|PTHR30115|SM00938|SSF54913 METD_RS14070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012338|IPR015868 Beta-lactamase/transpeptidase-like|Glutaminase GO:0004359|GO:0006541 G3DSA:3.40.710.10|MF_00313|PF04960|PTHR12544|SSF56601|TIGR03814 METD_RS14075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006542|GO:0006807 G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PTHR20852|PTHR20852:SF14|SM01230|SSF54368|SSF55931 METD_RS14080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|PTHR20852|PTHR20852:SF15|SM01230|SSF54368|SSF55931|TIGR00653 METD_RS14085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30543|PTHR30543:SF1|SSF52218 METD_RS14095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003029|IPR004476|IPR011805|IPR012340|IPR022966|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PS01175|PTHR23355|PTHR23355:SF9|SM00316|SM00955|SSF50249|TIGR00358|TIGR02063 METD_RS14100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009325 Protein of unknown function DUF983 PF06170 METD_RS14105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR12318|PTHR12318:SF0|SSF55811 METD_RS14110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655|IPR013656 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PF08448|PR00260|PTHR24422|PTHR24422:SF12|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 METD_RS14115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PTHR10366|PTHR10366:SF430|SSF51735 METD_RS14120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004453|IPR009051|IPR011989|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Armadillo-like helical|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 G3DSA:1.25.10.10|G3DSA:3.30.70.20|PF08331|PF13484|PS00198|PTHR30002|PTHR30002:SF4|SSF46548|TIGR00276 METD_RS14125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13417|PF14497|PTHR11260|PTHR11260:SF286|SSF47616|SSF52833 METD_RS14130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622|PTHR30622:SF3 METD_RS14135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006099|IPR006158|IPR014348|IPR016176 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0008152|GO:0016866|GO:0031419|GO:0046872 G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PTHR23408|PTHR23408:SF13|SSF51703|SSF52242 METD_RS14150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917|PTHR36919|PTHR36919:SF2 METD_RS14155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|PTHR21047|SSF51182|TIGR01221 METD_RS14160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181 METD_RS14165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005913|IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain|dTDP-4-dehydrorhamnose reductase family G3DSA:3.40.50.720|PF04321|PTHR10491|SSF51735|TIGR01214 METD_RS14170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF105|SSF53448|TIGR01207 METD_RS14175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain G3DSA:3.40.1410.10|SSF64288 METD_RS14180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 METD_RS14185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000185|IPR011115|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SecA DEAD-like, N-terminal|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767 METD_RS14190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13533|SSF111369 METD_RS14195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006638|IPR007197|IPR023404 Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|SM00729|SSF102114 METD_RS14200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001117|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PTHR11709|PTHR11709:SF33|SSF49503 METD_RS14210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|PTHR30560|PTHR30560:SF3|SSF102735|SSF109998|SSF54534|TIGR00115 METD_RS14215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001907|IPR018215|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|PTHR10381|PTHR10381:SF11|SSF52096 METD_RS14220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 METD_RS14225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|PTHR10046|PTHR10046:SF43|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 METD_RS14240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR022623 Domain of unknown function DUF3495|Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PF12000|PTHR12526|SSF53756 METD_RS14245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017804|IPR019257|IPR029063 Histidine-specific methyltransferase, SAM-dependent|Methyltransferase EgtD-like|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF10017|PIRSF018005|PTHR30468|PTHR30468:SF6|SSF53335|TIGR03438 METD_RS14250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002052|IPR007848|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF05175|PS00092|PTHR18895|SSF53335 METD_RS14255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014988 Uncharacterised protein family, YqcI/YcgG PF08892|PTHR40045 METD_RS14260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018959 Domain of unknown function DUF1989 PF09347|PTHR31527|PTHR31527:SF0 METD_RS14265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004813|IPR004814 Oligopeptide transporter OPT|Oligopeptide transporter, OPT superfamily GO:0055085 PF03169|PTHR31645|PTHR31645:SF0|TIGR00728|TIGR00733 METD_RS14270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PR00164 METD_RS14285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017039 Virulence factor BrkB PF03631|PTHR30213|PTHR30213:SF2|TIGR00765 METD_RS14300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF27|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 METD_RS14305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007581 Endonuclease V GO:0004519|GO:0006281 MF_00801|PF04493|PTHR28511|PTHR28511:SF1 METD_RS14310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|PTHR23305:SF12|SSF52540|SSF81271|TIGR00092 METD_RS14315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01195|PS01196|PTHR17224|SSF53178|TIGR00447 METD_RS14320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 METD_RS14325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032789 Pilus formation protein, N-terminal PF13629 METD_RS14330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007047 Flp/Fap pilin component PF04964 METD_RS14335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478|PTHR36506|PTHR36506:SF1 METD_RS14340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013974|IPR017592|IPR031571 Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain PF08666|PF16976|SM00858|TIGR03177 METD_RS14345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001775|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF13629|PR00811|PTHR30332|PTHR30332:SF6 METD_RS14350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013361|IPR019027 Pilus biogenesis CpaD|Pilus biogenesis CpaD-related PF09476|TIGR02522 METD_RS14355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR011006|IPR027417 CheY-like superfamily|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PTHR13696|PTHR13696:SF68|SSF52172|SSF52540 METD_RS14360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PTHR30258|PTHR30258:SF3|SSF52540 METD_RS14365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF1 METD_RS14370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF2 METD_RS14375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002539|IPR029069 HotDog domain|MaoC-like domain G3DSA:3.10.129.10|PF01575|PTHR13078|SSF54637 METD_RS14380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00216|PTHR23508|PTHR23508:SF16|SSF103473 METD_RS14385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946|IPR019953 K homology domain-like, alpha/beta|Organic hydroperoxide resistance protein famiy|OsmC/Ohr family GO:0006979 G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|PTHR33797|PTHR33797:SF2|SSF82784|TIGR03561 METD_RS14390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003781|IPR016040 CoA-binding|NAD(P)-binding domain GO:0048037 G3DSA:3.40.50.720|PF13380|PTHR33303|SM00881|SSF51735 METD_RS14395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR12418|PTHR12418:SF30|SSF54637|TIGR00369 METD_RS14400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PTHR23539|PTHR23539:SF1|SSF103473 METD_RS14405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787|IPR033479 Double Cache domain 1|GGDEF domain|Nucleotide cyclase G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF02743|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS14410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012413 BA14k family GO:0009405 PF07886 METD_RS14420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 METD_RS14425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.10.150.320|PF12836|SSF81585 METD_RS14430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002562|IPR012337 3'-5' exonuclease domain|Ribonuclease H-like domain GO:0003676|GO:0006139|GO:0008408 G3DSA:3.30.420.10|PF01612|PTHR12124|PTHR12124:SF48|SM00474|SSF53098 METD_RS14440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005653 Organic solvent tolerance-like, N-terminal G3DSA:2.60.450.10|PF03968|PTHR36504 METD_RS14445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR027417|IPR030921|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF497|SM00382|SSF52540|TIGR04406 METD_RS14450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|PTHR32248|PTHR32248:SF4|TIGR02395 METD_RS14455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003489|IPR032528 Ribosomal protein S30Ae/sigma 54 modulation protein|Sigma 54 modulation/S30EA ribosomal protein, C-terminal GO:0044238 G3DSA:3.30.160.100|PF02482|PF16321|PTHR33231|SSF69754|TIGR00741 METD_RS14460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002178|IPR006320|IPR016152 PTS EIIA type-2 domain|Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN|Phosphotransferase/anion transporter GO:0005215|GO:0006810|GO:0008982|GO:0009401 G3DSA:3.40.930.10|PF00359|PS00372|PTHR30505|PTHR30505:SF6|SSF55804|TIGR01419 METD_RS14470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000523|IPR003593|IPR011775|IPR027417 AAA+ ATPase domain|Magnesium chelatase ChlI domain|Magnesium chelatase, ATPase subunit I|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015995|GO:0016851 G3DSA:1.10.8.80|G3DSA:3.40.50.300|PF01078|PTHR32039|PTHR32039:SF10|SM00382|SSF52540|TIGR02030 METD_RS14475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001345|IPR005952|IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1|Phosphoglycerate mutase 1|Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0004619|GO:0006096|GO:0008152|GO:0016868 G3DSA:3.40.50.1240|MF_01039|PF00300|PIRSF000709|PS00175|PTHR11931|SM00855|SSF53254|TIGR01258 METD_RS14480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|PTHR20836|SSF51735|SSF55347|TIGR00036 METD_RS14485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508|PTHR33508:SF1|TIGR00427 METD_RS14490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF820|SSF53335 METD_RS14495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR017782|IPR032282 Hydroxyacylglutathione hydrolase|Hydroxyacylglutathione hydrolase, C-terminal domain|Metallo-beta-lactamase GO:0004416|GO:0019243 G3DSA:3.60.15.10|MF_01374|PF00753|PF16123|PIRSF005457|PTHR11935|PTHR11935:SF7|SM00849|SSF56281|TIGR03413 METD_RS14505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF56349 METD_RS14510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS14515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001764|IPR002772|IPR017853|IPR026891|IPR026892 Fibronectin type III-like domain|Glycoside hydrolase family 3|Glycoside hydrolase family 3 C-terminal domain|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 G3DSA:3.20.20.300|G3DSA:3.40.50.1700|PF00933|PF01915|PF14310|PR00133|PTHR30620|PTHR30620:SF5|SM01217|SSF51445|SSF52279 METD_RS14520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30325|SSF161098 METD_RS14525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025187 Protein of unknown function DUF4112 PF13430|PTHR35519|PTHR35519:SF2 METD_RS14530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF301|SSF53383 METD_RS14535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR022824|IPR032317 Multidrug resistance protein MdtA|RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF12|SSF111369|TIGR01730 METD_RS14540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF21|SSF82693|SSF82714|SSF82866 METD_RS14550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF34|SSF82693|SSF82714|SSF82866 METD_RS14555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF7|SSF56954|TIGR01845 METD_RS14560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 METD_RS14565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001804|IPR004429|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|PTHR11835|PTHR11835:SF35|SM01329|SSF53659|TIGR00169 METD_RS14580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF133|SSF52467|SSF52518 METD_RS14585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007263 Protein of unknown function DUF393 PF04134|PTHR33639 METD_RS14590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576 METD_RS14595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR011812|IPR023346 Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|PF00912|PTHR30400|PTHR30400:SF0|SSF53955|TIGR02070 METD_RS14600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005101|IPR006050|IPR008148|IPR014729 Cryptochrome/DNA photolyase, FAD-binding domain|DNA photolyase class 2|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0003904|GO:0006281 G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PTHR10211|PTHR10211:SF0|SSF48173|SSF52425 METD_RS14605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5|SSF53850 METD_RS14610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016130|IPR029021 Protein-tyrosine phosphatase, active site|Protein-tyrosine phosphatase-like GO:0004725|GO:0016311|GO:0016791 G3DSA:3.90.190.10|PS00383|SSF52799 METD_RS14615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF20|SSF53822 METD_RS14620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PTHR33619|PTHR33619:SF3 METD_RS14625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 METD_RS14630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PF05159 METD_RS14635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 PF05159 METD_RS14640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24322|PTHR24322:SF363|SSF51735 METD_RS14645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 G3DSA:3.40.50.170|PF00551|PTHR11138|SSF53328 METD_RS14650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF12|SSF53383|TIGR01326 METD_RS14655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005805|IPR006317|IPR014349|IPR017941|IPR019470 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein|Rieske iron-sulphur protein, C-terminal|Ubiquinol-cytochrome c reductase, iron-sulphur subunit|Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0016020|GO:0016491|GO:0016679|GO:0051537|GO:0055114 G3DSA:1.20.5.510|G3DSA:2.102.10.10|PF00355|PF10399|PR00162|PTHR10134|SSF50022|TIGR01416 METD_RS14660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005798|IPR016174|IPR027387|IPR030689 Cytochrome b|Cytochrome b/b6, C-terminal|Cytochrome b/b6-like domain|Di-haem cytochrome, transmembrane GO:0006122|GO:0008121|GO:0009055|GO:0016020|GO:0016491|GO:0022904|GO:0045275 G3DSA:1.20.810.10|PF00032|PF00033|PIRSF038885|PTHR19271|PTHR19271:SF9|SSF81342|SSF81648 METD_RS14665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002326|IPR009056 Cytochrome c-like domain|Cytochrome c1 GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:1.20.5.100|PF02167|PR00603|PTHR10266|PTHR10266:SF3|SSF46626 METD_RS14670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000845|IPR001369|IPR010044 Methylthioadenosine phosphorylase (MTAP)|Nucleoside phosphorylase domain|PNP/MTAP phosphorylase GO:0003824|GO:0009116|GO:0017061 G3DSA:3.40.50.1580|MF_01963|PF01048|PTHR11904|PTHR11904:SF1|SSF53167|TIGR01694 METD_RS14675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025582 YARHG domain PF13308|SM01324 METD_RS14680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR16509|PTHR16509:SF1|SSF56300 METD_RS14685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|PTHR23133|PTHR23133:SF2|SSF54211 METD_RS14690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024399 Protein of unknown function DUF2628 PF10947 METD_RS14695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PTHR21235|PTHR21235:SF1|SSF52317|TIGR01855 METD_RS14700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|PTHR21235|PTHR21235:SF15|SSF51366|TIGR00007 METD_RS14705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|PTHR21235|PTHR21235:SF2|SSF51366|TIGR00735 METD_RS14710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 G3DSA:1.10.287.1080|MF_01020|PF01503|PTHR21256|SSF101386|TIGR03188 METD_RS14715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004566|IPR006083|IPR027417 Bacterial pantothenate kinase|P-loop containing nucleoside triphosphate hydrolase|Phosphoribulokinase/uridine kinase GO:0004594|GO:0005524|GO:0005737|GO:0008152|GO:0015937|GO:0016301 G3DSA:3.40.50.300|MF_00215|PF00485|PIRSF000545|PTHR10285|PTHR10285:SF7|SSF52540|TIGR00554 METD_RS14720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS14725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 METD_RS14730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS14735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS14745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010234|IPR018968 Phasin|Phasin, subfamily 2 PF09361|TIGR01985 METD_RS14750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF13188|PR00344|PTHR24423|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 METD_RS14755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01123|PF00501|PF13193|PF16177|PS00455|PTHR24095|PTHR24095:SF178|SSF56801|TIGR02188 METD_RS14760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007436 Protein of unknown function DUF485 PF04341|PTHR38598 METD_RS14765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001734|IPR018212 Sodium/solute symporter|Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PS00456|PTHR11819|PTHR11819:SF13|TIGR00813 METD_RS14770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005828|IPR005829|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PS00217|PTHR23508|PTHR23508:SF7|SSF103473 METD_RS14775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 METD_RS14780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012480 Heparinase II/III-like PF07940 METD_RS14785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|PTHR11364|SM00450|SSF52821 METD_RS14795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR011049 Haemolysin-type calcium-binding repeat|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PTHR38340|SSF51120 METD_RS14800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR011545|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540 METD_RS14805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010879 Domain of unknown function DUF1508 G3DSA:3.30.160.160|PF07411|SSF160113 METD_RS14815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR11049|PTHR11049:SF5|SSF54637 METD_RS14820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF115|SM00849|SSF56281 METD_RS14825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 METD_RS14830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF6|SSF88659|SSF88946|TIGR02937 METD_RS14835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 MF_00115|PF01741|PR01264|PS01327|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 METD_RS14845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 METD_RS14850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 METD_RS14860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF55874 METD_RS14865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF292|SM00448|SM00862|SSF46894|SSF52172 METD_RS14870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|SM00347|SSF46785 METD_RS14875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001544|IPR005785|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF7|SSF56752|TIGR01122 METD_RS14880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021425 Protein of unknown function DUF3072 PF11272 METD_RS14890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009282 Protein of unknown function DUF937 PF06078 METD_RS14895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603|PTHR11206|PTHR11206:SF132 METD_RS14900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003148|IPR004771|IPR006036|IPR006153|IPR016040 Cation/H+ exchanger|K+/H+ exchanger|NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006812|GO:0006813|GO:0008324|GO:0015079|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|PR00335|PTHR16254|PTHR16254:SF22|SSF51735|TIGR00932 METD_RS14905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 METD_RS14910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002575|IPR005280|IPR011009 Aminoglycoside phosphotransferase|Homoserine kinase ThrB|Protein kinase-like domain GO:0004413|GO:0009088 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|MF_00301|PF01636|PTHR21064|SSF56112|TIGR00938 METD_RS14915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10430|SSF52833 METD_RS14920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003774 Protein of unknown function UPF0301 G3DSA:3.30.70.1300|G3DSA:3.40.1740.10|MF_00758|PF02622|PTHR30327|PTHR30327:SF1|SSF143456 METD_RS14925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011201|IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase|Zinc-ribbon domain, bacteria PF10005|PF15887|PIRSF012641 METD_RS14930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 METD_RS14935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|PTHR34580|PTHR34580:SF3|SSF46785 METD_RS14940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13417|PTHR11260|SSF47616|SSF52833 METD_RS14945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 METD_RS14950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PF13188|PR00344|PTHR24423|PTHR24423:SF379|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874 METD_RS14955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF0|SSF160544|TIGR00328 METD_RS14960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|PTHR30065|PTHR30065:SF1|TIGR01400 METD_RS14965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF2|TIGR01402 METD_RS14970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|PTHR34653|TIGR00205 METD_RS14975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR006299|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF2|TIGR01395 METD_RS14980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30435|PTHR30435:SF12 METD_RS14990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF207|SSF51905 METD_RS14995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002931 Transglutaminase-like G3DSA:3.90.260.10|PF01841|PTHR33490|PTHR33490:SF3|SM00460|SSF54001 METD_RS15000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386|PTHR30071|TIGR01191 METD_RS15005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PF04995|TIGR03141 METD_RS15010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000866|IPR004799|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Periplasmic protein thiol:disulphide oxidoreductase DsbE|Thioredoxin, conserved site|Thioredoxin-like fold GO:0015036|GO:0016209|GO:0016491|GO:0017004|GO:0030288|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10681|PTHR10681:SF107|SSF52833|TIGR00385 METD_RS15015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004017 Cysteine-rich domain PF02754|PTHR30296|PTHR30296:SF0 METD_RS15020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003741|IPR009051|IPR017896|IPR017900|IPR024185|IPR024569 4Fe-4S binding protein, C-terminal|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|5-formyltetrahydrofolate cyclo-ligase-like domain|Alpha-helical ferredoxin|LUD domain GO:0051536 G3DSA:1.10.1060.10|G3DSA:3.40.50.10420|PF02589|PF11870|PF13183|PS00198|PTHR32479|PTHR32479:SF10|SSF100950|SSF46548 METD_RS15025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003741|IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain|LUD domain G3DSA:3.40.50.10420|PF02589|SSF100950 METD_RS15030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002931 Transglutaminase-like G3DSA:3.90.260.10|PF01841|PTHR33490|PTHR33490:SF3|SM00460|SSF54001 METD_RS15035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005822|IPR005823|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PTHR11545|SSF52161|TIGR01066 METD_RS15040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 METD_RS15045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018744 Domain of unknown function DUF2293 PF10056 METD_RS15050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004606|IPR005116|IPR008995 Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|Transport-associated OB, type 1 GO:0006810|GO:0030151 G3DSA:2.40.50.100|PF03459|SSF50331|TIGR00638 METD_RS15055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008183|IPR011013|IPR014718 Aldose 1-/Glucose-6-phosphate 1-epimerase|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0030246 G3DSA:2.70.98.10|PF01263|PTHR11122|PTHR11122:SF14|SSF74650 METD_RS15060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 METD_RS15080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005584|IPR013088 DNA gyrase inhibitor YacG|Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 G3DSA:3.30.50.10|MF_00649|PF03884|PTHR36150|PTHR36150:SF1|SSF57716 METD_RS15085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 METD_RS15160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR010998|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR34605|PTHR34605:SF1|SSF47823|SSF56349 METD_RS15165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|SSF56349 METD_RS15170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 METD_RS15190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF19|SSF56935|TIGR01783 METD_RS15205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003544|IPR026031 Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PIRSF002764|PR01414|PTHR30070|PTHR30070:SF1|TIGR01190 METD_RS15210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005895|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0016887|GO:0017004|GO:0030288 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF508|SM00382|SSF52540|TIGR01189 METD_RS15220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR015937|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2|Aconitase/isopropylmalate dehydratase GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF1|SSF52016|SSF53732|TIGR01341 METD_RS15225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|SSF54909 METD_RS15230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR005955|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Maleylacetoacetate isomerase|Thioredoxin-like fold GO:0003824|GO:0005515|GO:0005737|GO:0009072 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF02798|PF14497|PTHR11260|PTHR11260:SF289|SSF47616|SSF52833|TIGR01262 METD_RS15235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF140|SSF51905 METD_RS15240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009799|IPR011008 Dimeric alpha-beta barrel|EthD domain G3DSA:3.30.70.900|PF07110|PTHR40260|SSF54909|TIGR02118 METD_RS15250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|SM00283|SSF58104 METD_RS15255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003473|IPR023066 Quinolinate synthase A, type 2|Quinolinate synthetase A GO:0008987|GO:0009435|GO:0016765|GO:0051539 MF_00568|PF02445|PTHR30573|PTHR30573:SF0|SSF142754|TIGR00550 METD_RS15260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003953|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PR00368|PTHR11632|PTHR11632:SF27|SSF46977|SSF51905|SSF56425 METD_RS15265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32179|SSF51690|SSF54675|TIGR00078 METD_RS15270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS15280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018684 Protein of unknown function DUF2171 PF09939 METD_RS15285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010376 Domain of unknown function DUF971 PF06155|PTHR35303 METD_RS15290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|PS01305|PTHR22960|SM00729|SSF102114|TIGR02666 METD_RS15300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014982 GSCFA PF08885 METD_RS15305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF49|SSF48179|SSF51735 METD_RS15310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|PTHR11088:SF25|SSF52540|TIGR00174 METD_RS15315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF7|SSF56784|TIGR00338|TIGR01488 METD_RS15320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF00595|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 METD_RS15325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001107|IPR001972|IPR010200 Band 7 domain|HflC|Stomatin family GO:0016020|GO:0016021|GO:0052547 PF01145|PIRSF005651|PTHR10264|PTHR10264:SF80|SM00244|SSF117892 METD_RS15330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001107|IPR001972|IPR010201|IPR020980 Band 7 domain|HflK|Menbrane protein HflK, N-terminal|Stomatin family GO:0016020|GO:0016021 PF01145|PF12221|PTHR10264|PTHR10264:SF51|SM00244|SSF117892|TIGR01933 METD_RS15335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001796|IPR012259|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PTHR22778|PTHR22778:SF16|SSF53597 METD_RS15340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000398|IPR020940|IPR023451 Thymidylate synthase|Thymidylate synthase, active site|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PS00091|PTHR11548|SSF55831|TIGR03284 METD_RS15345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 METD_RS15350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007481 Stringent starvation protein B G3DSA:2.30.30.220|PF04386|SSF101738 METD_RS15355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001128|IPR002401|IPR017972 Cytochrome P450|Cytochrome P450, E-class, group I|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00385|PR00463|PS00086|PTHR24305|PTHR24305:SF21|SSF48264 METD_RS15360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF1|SSF48557|TIGR00979 METD_RS15365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025227 Protein of unknown function DUF4169 PF13770 METD_RS15370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027373 Ribbon-helix-helix domain PF13467 METD_RS15375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009394 DNA repair protein MmcB-like PF06319|PIRSF031796 METD_RS15380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|SSF53807 METD_RS15385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF5 METD_RS15390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004625|IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Pyridoxine kinase|Ribokinase-like GO:0008478|GO:0009443 G3DSA:3.40.1190.20|PF08543|PTHR10534|PTHR10534:SF0|SSF53613|TIGR00687 METD_RS15395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|PTHR13774|PTHR13774:SF15|SSF54506|TIGR00654 METD_RS15400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|SSF55811 METD_RS15410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF9|SM00917|SSF110921|SSF51569|TIGR00973 METD_RS15415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF11|SSF143975|SSF52016|TIGR00110 METD_RS15420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011669|IPR016040|IPR027417 NAD(P)-binding domain|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF1611 G3DSA:3.40.50.300|G3DSA:3.40.50.720|PF07755|PIRSF026760|PTHR40690|PTHR40690:SF1|SSF52540 METD_RS15425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001354|IPR013341|IPR013342|IPR029017|IPR029065 Enolase C-terminal domain-like|Enolase N-terminal domain-like|Mandelate racemase/muconate lactonizing enzyme, C-terminal|Mandelate racemase/muconate lactonizing enzyme, N-terminal domain|Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 G3DSA:3.20.20.120|G3DSA:3.30.390.10|PF02746|PF13378|PTHR13794|PTHR13794:SF60|SM00922|SSF51604|SSF54826 METD_RS15430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 METD_RS15435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002587|IPR013021|IPR016040 Myo-inositol-1-phosphate synthase|Myo-inositol-1-phosphate synthase, GAPDH-like|NAD(P)-binding domain GO:0004512|GO:0006021|GO:0008654 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01658|PF07994|PIRSF015578|PTHR11510|SSF51735|SSF55347 METD_RS15440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|SSF109604 METD_RS15445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 METD_RS15450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|SSF51735|SSF55347 METD_RS15455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003776 YcaO-like domain PF02624|PTHR37809 METD_RS15460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013022 Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PTHR12110|PTHR12110:SF21|SSF51658 METD_RS15465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13579|PTHR12526|SSF53756 METD_RS15470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003737|IPR024078 N-acetylglucosaminyl phosphatidylinositol deacetylase-related|Putative deacetylase LmbE-like domain G3DSA:3.40.50.10320|PF02585|PTHR12993|SSF102588 METD_RS15475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SSF52141 METD_RS15480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|PTHR34697|PTHR34697:SF2 METD_RS15485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF554|SM00387|SM00388|SSF47384|SSF55785|SSF55874 METD_RS15490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR006121|IPR006122|IPR008250|IPR013022|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy metal-associated domain, copper ion-binding|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB|Xylose isomerase-like, TIM barrel domain GO:0000166|GO:0005507|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.20.20.150|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|PTHR24093|SSF55008|SSF56784|SSF81653|SSF81665|TIGR00003|TIGR01494|TIGR01511|TIGR01525 METD_RS15495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000551|IPR009061|IPR011789 Cu(I)-responsive transcriptional regulator|MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0003700|GO:0005507|GO:0006355|GO:0045893 G3DSA:1.10.1660.10|PF13411|PR00040|PS00552|PTHR30204|PTHR30204:SF16|SM00422|SSF46955|TIGR02044 METD_RS15500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 METD_RS15510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002656 Acyltransferase 3 GO:0016747 PF01757|PTHR23028 METD_RS15520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002501|IPR014780|IPR020103|IPR032819 Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 MF_01080|PF01509|PF16198|PTHR13767|PTHR13767:SF2|SSF55120|TIGR00431 METD_RS15525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000238|IPR015946|IPR020053|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain|Ribosome-binding factor A, conserved site GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|PTHR33515|SSF89919|TIGR00082 METD_RS15530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR013575|IPR023115|IPR027417 Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF08364|PF11987|PS01176|PTHR23115|PTHR23115:SF184|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 METD_RS15535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007393|IPR029064 50S ribosomal protein L30e-like|Domain of unknown function DUF448 G3DSA:3.30.1230.10|PF04296|PTHR34215|PTHR34215:SF1|SSF55315|SSF64376 METD_RS15540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 DNA repair Rad51/transcription factor NusA, alpha-helical|K Homology domain|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF14520|PTHR22648|PTHR22648:SF0|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954 METD_RS15545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|PTHR33867|PTHR33867:SF1|SSF74942|SSF75420 METD_RS15550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PS00101|PTHR23416|PTHR23416:SF69|SSF51161 METD_RS15555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PTHR10174|PTHR10174:SF2|SM00859|SSF51735|SSF55347|TIGR01296 METD_RS15570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|PTHR13256:SF21|SSF55729 METD_RS15580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF4|SM00833|SSF52540 METD_RS15585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|PR00455|PTHR30328|PTHR30328:SF6|SSF46689|SSF48498 METD_RS15590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021273 Protein of unknown function DUF2852 PF11014 METD_RS15595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004193|IPR006047|IPR012768|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold|Malto-oligosyltrehalose trehalohydrolase GO:0003824|GO:0004553|GO:0005975|GO:0005992 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00128|PF02922|PF11941|PIRSF006337|PTHR10357|PTHR10357:SF110|SM00642|SSF51445|SSF81296|TIGR02402 METD_RS15600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003385|IPR006047|IPR012767|IPR013781|IPR013797|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 77|Glycosyl hydrolase, family 13, catalytic domain|Malto-oligosyltrehalose synthase|Maltooligosyl trehalose synthase, N-terminal GO:0003824|GO:0004134|GO:0005975 G3DSA:1.10.10.470|G3DSA:1.10.150.200|G3DSA:3.20.20.80|G3DSA:3.30.1590.10|PF00128|PF02446|PTHR10357|PTHR10357:SF166|SM00642|SSF51445|TIGR00217|TIGR02401 METD_RS15605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006047|IPR013781|IPR015902|IPR017853|IPR021828|IPR026585|IPR032792 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase|Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S|Glycogen debranching enzyme, glucanotransferase domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0004553|GO:0005975|GO:0016757 G3DSA:3.20.20.80|MF_02124|PF00128|PF11896|PF14701|PTHR10357|PTHR10357:SF137|SM00642|SSF51445 METD_RS15610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006047|IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PTHR10357|PTHR10357:SF164|SM00642|SSF51445 METD_RS15615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|MiaB-like tRNA modifying enzyme|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF45|SM00729|SSF102114|TIGR00089|TIGR01579 METD_RS15620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|PTHR31689|SSF54506|TIGR00652 METD_RS15625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010499|IPR011256|IPR029442 Bacterial transcription activator, effector binding|GyrI-like small molecule binding domain|Regulatory factor, effector binding domain G3DSA:3.20.80.10|PF06445|SM00871|SSF55136 METD_RS15630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003265|IPR003651|IPR004035|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|PF10576|PIRSF001435|PS00764|PTHR10359|SM00478|SSF48150 METD_RS15635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR37822|PTHR37822:SF2 METD_RS15645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003844 Uncharacterised protein family UPF0060 GO:0016020 MF_00010|PF02694|PTHR36116|PTHR36116:SF1|SSF103481 METD_RS15650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF160|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 METD_RS15655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002575|IPR006047|IPR011009|IPR012811|IPR013780|IPR013781|IPR015902|IPR017853|IPR032091 Aminoglycoside phosphotransferase|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Maltogenic Amylase, C-terminal|Protein kinase-like domain|Trehalose synthase/probable maltokinase, C-terminal domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.1200.10|PF00128|PF01636|PF16657|PTHR10357|PTHR10357:SF164|SSF51011|SSF51445|SSF56112|TIGR02457 METD_RS15665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|PS00300|PTHR11564|PTHR11564:SF16|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 METD_RS15670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279|PTHR36917|PTHR36917:SF1|TIGR00997 METD_RS15675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF159245 METD_RS15680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR014105|IPR023753 Amine oxidase|Carotenoid/retinoid oxidoreductase|FAD/NAD(P)-binding domain GO:0016117|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10668|PTHR10668:SF75|SSF51905|TIGR02734 METD_RS15685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PTHR12001|PTHR12001:SF23|SSF48576 METD_RS15690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001077|IPR011991|IPR029063|IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain|O-methyltransferase, family 2|S-adenosyl-L-methionine-dependent methyltransferase|Winged helix-turn-helix DNA-binding domain GO:0008171 G3DSA:1.10.10.10|G3DSA:3.40.50.150|PF00891|PF16864|PTHR11746|PTHR11746:SF63|SSF46785|SSF53335 METD_RS15695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR005903|IPR011032|IPR016040 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase|Alcohol dehydrogenase superfamily, zinc-type|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0030494|GO:0036354|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735|TIGR01202 METD_RS15700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000392|IPR010246|IPR027417|IPR030655 Chlorophyllide reductase iron protein subunit X|NifH/chlL conserved site|Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015979|GO:0016491|GO:0016628|GO:0030494|GO:0051539|GO:0055114 G3DSA:3.40.50.300|PF00142|PR00091|PS00692|PS00746|PTHR13696|PTHR13696:SF5|SSF52540|TIGR02016 METD_RS15705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000510|IPR010245|IPR016209 Chlorophyllide reductase subunit Y|Nitrogenase/oxidoreductase, component 1|Protochlorophyllide reductase, ChlB, light independent GO:0015979|GO:0016021|GO:0016491|GO:0016730|GO:0016731|GO:0030494|GO:0046148|GO:0055114 G3DSA:3.40.50.1980|PF00148|PIRSF000163|PTHR39429|PTHR39429:SF2|SSF53807|TIGR02015 METD_RS15710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000510|IPR010244|IPR016209 Chlorophyllide reductase subunit Z|Nitrogenase/oxidoreductase, component 1|Protochlorophyllide reductase, ChlB, light independent GO:0016491|GO:0016730|GO:0030494|GO:0046148|GO:0055114 G3DSA:3.40.50.1980|PF00148|PIRSF000163|PTHR33712|PTHR33712:SF7|SSF53807|TIGR02014 METD_RS15720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000066|IPR002362|IPR023623 Antenna complex, alpha/beta subunit|Antenna complex, beta subunit|Antenna complex, beta subunit, conserved site GO:0016021|GO:0019684|GO:0030077|GO:0045156 G3DSA:1.20.5.250|PF00556|PR00674|PS00969|SSF56918 METD_RS15725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000066|IPR002361|IPR018332 Antenna complex, alpha subunit|Antenna complex, alpha subunit conserved site|Antenna complex, alpha/beta subunit GO:0016021|GO:0019684|GO:0019866|GO:0030077|GO:0045156 G3DSA:1.20.5.890|PF00556|PR00673|PS00968|SSF56918 METD_RS15730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000484|IPR005871 Photosynthetic reaction centre, L subunit|Photosynthetic reaction centre, L/M GO:0009772|GO:0019684|GO:0030077|GO:0045156 G3DSA:1.20.85.10|PF00124|PR00256|PS00244|PTHR33149|PTHR33149:SF2|SSF81483|TIGR01157 METD_RS15735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000484|IPR005781 Photosynthetic reaction centre, L/M|Photosynthetic reaction centre, M subunit GO:0009772|GO:0019684|GO:0030077|GO:0045156 G3DSA:1.20.85.10|PF00124|PR00256|PS00244|PTHR33149|PTHR33149:SF2|SSF81483|TIGR01115 METD_RS15740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003158|IPR011031|IPR023119 Multihaem cytochrome|Multihaem cytochrome, photosynthetic reaction centre cytochrome subunit-like|Photosynthetic reaction centre, cytochrome c subunit GO:0005506|GO:0009055|GO:0019684|GO:0020037|GO:0030077 G3DSA:1.10.468.10|PF02276|PIRSF000017|SSF48695 METD_RS15745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF0|SM00382|SSF52540|SSF90123|TIGR01842 METD_RS15750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003997|IPR010129 RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PTHR30386|PTHR30386:SF3|TIGR01843 METD_RS15755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PF00444|PS00828|PTHR18804|PTHR18804:SF11|SSF57840|TIGR01022 METD_RS15760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SM00028|SSF48452 METD_RS15765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|SSF53474 METD_RS15770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|SSF50800|SSF51621|SSF52935|TIGR01064 METD_RS15775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PTHR34001|SSF56925 METD_RS15780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009380 Protein of unknown function DUF1036 PF06282 METD_RS15785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007835|IPR025286 MOFRL domain|MOFRL-associated domain G3DSA:3.40.1480.10|G3DSA:3.40.50.10180|PF05161|PF13660|PTHR12227|PTHR12227:SF0|SSF82544 METD_RS15790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002508|IPR007709|IPR011227 Cell wall hydrolase/autolysin, catalytic|N-formylglutamate amidohydrolase|Uncharacterised conserved protein UCP029730 GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|PIRSF029730|SSF53187 METD_RS15795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023163 SMc04008-like domain G3DSA:1.10.3340.10|PF06844|SSF158757 METD_RS15800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018753 Azospirillum phage Cd, Gp10 MF_00797|PF10073 METD_RS15805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009045|IPR010275 Hedgehog signalling/DD-peptidase zinc-binding domain|Protein of unknown function DUF882 G3DSA:3.30.1380.10|PF05951|PTHR37425|SSF55166 METD_RS15810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|PTHR41533|PTHR41533:SF1|SSF141523|SSF47090 METD_RS15815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 METD_RS15820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001567|IPR011977|IPR013647|IPR024079 Metallopeptidase, catalytic domain|Oligopeptidase F, N-terminal domain|Peptidase M3A/M3B|Peptidase M3B, oligoendopeptidase-related clade 3 GO:0004222|GO:0006508|GO:0008237 G3DSA:3.40.390.10|PF01432|PF08439|PTHR11804|PTHR11804:SF8|SSF55486|TIGR02290 METD_RS15825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013432 Putative addiction module antidote G3DSA:2.10.260.10|SSF89447|TIGR02609 METD_RS15830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003812|IPR006440 Death on curing protein|Fido domain GO:0016301 G3DSA:1.10.3290.10|PF02661|PIRSF018297|PTHR39426|PTHR39426:SF1|SSF140931|TIGR01550 METD_RS15835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004147|IPR011009 Protein kinase-like domain|UbiB domain PF03109|PTHR10566|SSF56112 METD_RS15840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type G3DSA:1.20.5.160|PF07835|SSF81469 METD_RS15845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007698|IPR007886|IPR008143|IPR016040 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.1770|PF01262|PF05222|PS00837|PTHR10160|SM01002|SM01003|SSF51735|SSF52283 METD_RS15850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal PF12769|PTHR10160 METD_RS15855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012136|IPR029035 DHS-like NAD/FAD-binding domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PIRSF000204|PTHR10160|PTHR10160:SF24|SSF52467 METD_RS15860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|PTHR30255|PTHR30255:SF2|SSF64182|TIGR00644 METD_RS15870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS15875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PF07536|PTHR41523|SM00911 METD_RS15880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103|PTHR12815|PTHR12815:SF11 METD_RS15885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007452 Translocation and assembly module TamB PF04357|PTHR36985 METD_RS15900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003712|IPR008076|IPR010982 Cyanate hydratase|Cyanate lyase, C-terminal|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0008824|GO:0009439 G3DSA:1.10.260.40|G3DSA:3.30.1160.10|MF_00535|PF02560|PIRSF001263|PR01693|PTHR34186|PTHR34186:SF2|SM01116|SSF47413|SSF55234|TIGR00673 METD_RS15905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR002078|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAC motif|PAS domain|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF13188|PF13426|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF16|SM00086|SM00091|SM00382|SSF52540|SSF55785|TIGR00229 METD_RS15910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966|PTHR37944|PTHR37944:SF2 METD_RS15915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF00034|PF03150|PIRSF000294|PTHR30600|PTHR30600:SF7|SSF46626 METD_RS15920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420|SSF49503 METD_RS15925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001633|IPR003660|IPR013767|IPR024478|IPR029787 4HB MCP domain|EAL domain|GGDEF domain|HAMP domain|Nucleotide cyclase|PAS domain|PAS fold GO:0004871|GO:0006355|GO:0007165|GO:0016021 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00672|PF00989|PF00990|PF12729|PF12860|PTHR10799|PTHR10799:SF657|SM00052|SM00091|SM00267|SM00304|SSF141868|SSF158472|SSF55073|SSF55785|TIGR00254 METD_RS15930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007760|IPR009078|IPR012347|IPR027407 Ferritin-like superfamily|Ferritin-related|Manganese catalase|Manganese catalase, domain 2 G3DSA:1.20.1260.10|G3DSA:3.30.1530.10|PF05067|PTHR30565|PTHR30565:SF2|SSF47240 METD_RS15935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|PTHR30565|PTHR30565:SF1|SSF47240 METD_RS15940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PTHR11558|PTHR11558:SF4|SSF53335 METD_RS15955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|G3DSA:3.10.580.10|PF00654|PR00762|PTHR11689|PTHR11689:SF14|SSF54631|SSF81340 METD_RS15965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362 METD_RS15975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|PTHR34354|PTHR34354:SF1|SSF55620|TIGR03139 METD_RS15980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 METD_RS15985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 METD_RS15990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001017|IPR017597|IPR029061 Dehydrogenase, E1 component|Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y|Thiamin diphosphate-binding fold GO:0004739|GO:0006086|GO:0008152|GO:0016624|GO:0043231 G3DSA:3.40.50.970|PF00676|PTHR11516|PTHR11516:SF40|SSF52518|TIGR03182 METD_RS15995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR003016|IPR005475|IPR009014|IPR011053|IPR029061|IPR033247|IPR033248 2-oxo acid dehydrogenase, lipoyl-binding site|Biotin/lipoyl attachment|Single hybrid motif|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:2.40.50.100|G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00364|PF02779|PF02780|PS00189|PTHR11624|PTHR11624:SF11|SM00861|SSF51230|SSF52518|SSF52922 METD_RS16000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR031796 Protein of unknown function DUF5076 PF16826 METD_RS16005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006257|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex|E3-binding domain|Single hybrid motif GO:0004742|GO:0006090|GO:0008152|GO:0016746|GO:0045254 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|PTHR23151:SF9|SSF47005|SSF51230|SSF52777|TIGR01349 METD_RS16010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF125|SSF51905|SSF55424|TIGR01350 METD_RS16030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF12|SSF141523 METD_RS16035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|PTHR19328|PTHR19328:SF26|SSF50952 METD_RS16045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011105 Cell wall hydrolase, SleB GO:0016787 PF07486 METD_RS16050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003698|IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PIRSF005963|PTHR10949|SM00729|SSF102114|TIGR00510 METD_RS16055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain G3DSA:3.30.530.20|PF03364|PTHR12901|SSF55961 METD_RS16060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000485|IPR011008|IPR011991|IPR019887|IPR019888 AsnC-type HTH domain|Dimeric alpha-beta barrel|Transcription regulator AsnC-type|Transcription regulator AsnC/Lrp, ligand binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF01037|PF13404|PR00033|PTHR30154|PTHR30154:SF12|SM00344|SSF46785|SSF54909 METD_RS16065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PTHR13812|PTHR13812:SF19|SSF51735 METD_RS16070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901 METD_RS16075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 METD_RS16080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|PF08541|PF08545|PTHR34069|PTHR34069:SF2|SSF53901 METD_RS16085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00081|PS00061|PTHR24321|PTHR24321:SF6|SM00822|SSF51735 METD_RS16090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PTHR21266|PTHR21266:SF2|SSF50022|SSF55961 METD_RS16095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR011004|IPR016185|IPR018357|IPR020019 Hexapeptide repeat|Hexapeptide transferase, conserved site|Pre-ATP-grasp domain|Sialic acid O-acyltransferase NeuD-like|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|G3DSA:3.40.50.20|PF00132|PS00101|PTHR23416|SSF51161|TIGR03570 METD_RS16100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001440|IPR011990|IPR019734|IPR029489 O-GlcNAc transferase, C-terminal|Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF00515|PF13432|PF13844|PTHR23083|SM00028|SSF48452|SSF53756 METD_RS16105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016919|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 G3DSA:3.40.50.270|PIRSF029416|SSF52788 METD_RS16110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 METD_RS16115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|SSF47741|SSF54292 METD_RS16120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PTHR11908|PTHR11908:SF97|SM01092|SSF55447|SSF56176 METD_RS16125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF71|SM01008|SSF54665|SSF56003 METD_RS16130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199 METD_RS16135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001228|IPR003526|IPR018294|IPR020555|IPR026596|IPR029044 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site|2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Bifunctional enzyme IspD/IspF|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0008685|GO:0016114|GO:0050518 G3DSA:3.30.1330.50|G3DSA:3.90.550.10|MF_00107|MF_00108|MF_01520|PF01128|PF02542|PS01295|PS01350|PTHR32125|PTHR32125:SF4|SSF53448|SSF69765|TIGR00151|TIGR00453 METD_RS16140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF25|SSF51395|TIGR00737 METD_RS16145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF520|SM00387|SM00388|SSF47384|SSF55785|SSF55874 METD_RS16150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR010114|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, nitrogen regulation NR(I)|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0006808|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF15|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR01818 METD_RS16155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|PTHR24031|PTHR24031:SF319|SM00487|SM00490|SSF52540 METD_RS16160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013767|IPR017232 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF00989|PF02518|PIRSF037532|PR00344|PTHR24423|PTHR24423:SF520|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS16165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00676|PS00688|PTHR32071|PTHR32071:SF17|SM00382|SM00448|SSF46689|SSF52172|SSF52540 METD_RS16170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005001|IPR010920 LSM domain|RNA-binding protein Hfq GO:0003723|GO:0006355 G3DSA:2.30.30.100|MF_00436|PTHR34772|PTHR34772:SF1|SSF50182|TIGR02383 METD_RS16175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR03156 METD_RS16180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001902|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 PF00916|PTHR11814|PTHR11814:SF123 METD_RS16185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|PTHR11002|PTHR11002:SF13|SM00947|SSF53056 METD_RS16195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005183|IPR012347 Domain of unknown function DUF305|Ferritin-related G3DSA:1.20.1260.10|PF03713|PTHR36933|PTHR36933:SF1 METD_RS16205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866|TIGR00914 METD_RS16210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 METD_RS16220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS16225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PF01584|PTHR22617|SM00260|SSF50341 METD_RS16230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000780|IPR011990|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase|Tetratricopeptide-like helical domain GO:0005515|GO:0008757 G3DSA:1.10.155.10|G3DSA:1.25.40.10|G3DSA:3.40.50.150|PF01739|PF03705|PR00996|PTHR24422|SM00138|SSF47757|SSF48452|SSF53335 METD_RS16235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PF01584|PTHR22617|SM00260|SSF50341 METD_RS16240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PTHR32089|SM00283|SM00304|SSF58104 METD_RS16245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002545|IPR003594|IPR004358|IPR008207|IPR011006 CheW-like domain|CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000160|GO:0004871|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF01584|PF01627|PF02518|PR00344|PTHR22617|PTHR22617:SF6|SM00073|SM00260|SM00387|SM00448|SSF47226|SSF50341|SSF52172|SSF55874 METD_RS16250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF16|SM00448|SSF52172|SSF52738 METD_RS16255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF497|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 METD_RS16260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS16265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000518|IPR017854 Metallothionein domain|Metallothionein, family 14, prokaryote GO:0046872 G3DSA:2.30.170.10|PD019076|PF02069|PR00859|SSF57868 METD_RS16270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001680|IPR002327|IPR009056|IPR015943|IPR017986|IPR020472 Cytochrome c, class IA/ IB|Cytochrome c-like domain|G-protein beta WD-40 repeat|WD40 repeat|WD40-repeat-containing domain|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:2.130.10.10|PF00034|PF00400|PR00320|PR00604|PTHR22847|SM00320|SSF46626|SSF50978 METD_RS16275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PTHR10192|PTHR10192:SF12|SM00852|SSF53218|SSF63867|SSF63882 METD_RS16280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453|IPR005110|IPR005111|IPR008284|IPR024370 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site|PBP domain GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PF12727|PS01079|PTHR10192|PTHR10192:SF12|SM00852|SSF53218|SSF53850|SSF63867|SSF63882|TIGR00177 METD_RS16285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004435|IPR027417 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0006777 G3DSA:3.40.50.300|PF03205|PTHR40072|SSF52540|TIGR00176 METD_RS16290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453|IPR005110|IPR005111|IPR008284 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|PTHR10192|PTHR10192:SF17|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 METD_RS16295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|PTHR38431|SSF46785|SSF53850 METD_RS16300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|PTHR30183:SF4|SSF161098 METD_RS16305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS16310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR37945|SSF53850 METD_RS16320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|PTHR36505|SSF50346 METD_RS16325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007444|IPR011013|IPR013783|IPR014438|IPR014718|IPR014756 Galactose mutarotase-like domain|Glucan biosynthesis, periplasmic, MdoG C-terminal|Glucan biosynthesis, periplasmic, MdoG/D|Glycoside hydrolase-type carbohydrate-binding, subgroup|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0005975|GO:0016051|GO:0030246|GO:0042597 G3DSA:2.60.40.10|G3DSA:2.70.98.10|PF04349|PIRSF006281|PTHR30504|SSF74650|SSF81296 METD_RS16330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13632|PTHR10587|PTHR10587:SF63|SSF53448 METD_RS16340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|SSF53383 METD_RS16345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004307 TspO/MBR-related protein GO:0016021 PF03073|PIRSF005859|PTHR10057 METD_RS16350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS16355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000836|IPR005904|IPR029057 Hypoxanthine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004422|GO:0005737|GO:0006166|GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF56|SSF53271|TIGR01203 METD_RS16360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011723|IPR021834 Protein of unknown function DUF3426|Zinc finger/thioredoxin putative PF11906|PF13717|TIGR02098 METD_RS16365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005286|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cell division protein FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF470|SM00382|SSF52540|TIGR02673 METD_RS16375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF1 METD_RS16380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 METD_RS16385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PTHR11063|PTHR11063:SF6|SM00359|SSF53633|SSF88697|TIGR01027 METD_RS16390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 METD_RS16395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR39321|SSF52374|TIGR00482 METD_RS16400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|SSF81301|TIGR00090 METD_RS16405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025311 Domain of unknown function DUF4166 PF13761 METD_RS16410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR026282 DNA-binding protein, MJ1563 type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF12802|PIRSF006707|PTHR38465|SSF46785 METD_RS16415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008183|IPR011013|IPR014718|IPR015443|IPR018052 Aldose 1-/Glucose-6-phosphate 1-epimerase|Aldose 1-epimerase|Aldose 1-epimerase, conserved site|Galactose mutarotase-like domain|Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0016853|GO:0019318|GO:0030246 G3DSA:2.70.98.10|PF01263|PIRSF005096|PS00545|PTHR10091|PTHR10091:SF0|SSF74650 METD_RS16420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 METD_RS16425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006127|IPR006128|IPR006129 Adhesin B|Adhesion lipoprotein|Periplasmic solute binding protein, ZnuA-like GO:0007155|GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|PR00690|PR00691|PTHR30477|PTHR30477:SF16|SSF53807 METD_RS16430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003749|IPR010034|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin converting factor, subunit 1|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 GO:0006777 G3DSA:3.10.20.30|PF02597|PTHR33359|SSF54285|TIGR01682 METD_RS16435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PS00379|PTHR14269|TIGR00560 METD_RS16440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF14520|PTHR30562|PTHR30562:SF1|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 METD_RS16445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|PF04344|SSF75708 METD_RS16450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS16455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018648 Protein of unknown function DUF2076 PF09849 METD_RS16460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|PTHR34001|SSF56925 METD_RS16465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|PTHR30616|SSF64438|TIGR00726 METD_RS16470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003788|IPR029063 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA|S-adenosyl-L-methionine-dependent methyltransferase PF02636|PTHR12049|PTHR12049:SF7|SSF53335 METD_RS16475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544 METD_RS16480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PR01837|PTHR33778 METD_RS16485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF2|SSF53738|SSF55957 METD_RS16495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011105 Cell wall hydrolase, SleB GO:0016787 PF07486|PTHR21666|PTHR21666:SF178 METD_RS16505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000853|PS00370|PS00742|PTHR22931|PTHR22931:SF9|SSF51621|SSF52009|SSF56059|TIGR01828 METD_RS16510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS16515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR21366|SSF54593 METD_RS16525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR014710|IPR018488|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|PS00889|PTHR24567|PTHR24567:SF30|SM00100|SSF51206 METD_RS16530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019626 Stress-induced protein, KGG, repeat PF10685 METD_RS16535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|SM00347|SSF46785 METD_RS16540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010865 Protein of unknown function DUF1499 PF07386 METD_RS16545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR23131|PTHR23131:SF4|SM00849|SSF56281 METD_RS16550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021293 Protein of unknown function DUF2865 PF11064 METD_RS16565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006|IPR011991|IPR014605 CheY-like superfamily|Signal transduction response regulator PhyR-like, alphaproteobacteria|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PIRSF036400|PTHR26402|PTHR26402:SF413|SM00448|SSF52172 METD_RS16575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR36931 METD_RS16580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PIRSF000521|PTHR11986|PTHR11986:SF81|SSF53383 METD_RS16590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR31302|PTHR31302:SF6|SSF56300 METD_RS16600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181|IPR032962 Acetyltransferase HPA2/HPA3|Acyl-CoA N-acyltransferase|GNAT domain GO:0008080|GO:0016746 G3DSA:3.40.630.30|PF00583|PTHR10545|PTHR10545:SF39|SSF55729 METD_RS16605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003265|IPR010316|IPR011257|IPR023170 DNA glycosylase|DNA-3-methyladenine glycosylase AlkA, N-terminal|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.30.310.20|PF00730|PF06029|PTHR10242|PTHR10242:SF3|SM00478|SM01009|SSF48150|SSF55945 METD_RS16615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002121|IPR002562|IPR006292|IPR010997|IPR012337 3'-5' exonuclease domain|HRDC domain|HRDC-like|Ribonuclease D|Ribonuclease H-like domain GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008033|GO:0008408|GO:0033890|GO:0044237 G3DSA:3.30.420.10|MF_01899|PF00570|PF01612|PTHR12124|PTHR12124:SF42|SM00474|SSF47819|SSF53098|TIGR01388 METD_RS16625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044 Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|PTHR21581|PTHR21581:SF3|SM00936|SSF56601|SSF69189 METD_RS16630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032712 AsmA-like, C-terminal PF13502 METD_RS16635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004163|IPR004165|IPR012792 3-oxoacid CoA-transferase, subunit A|Coenzyme A transferase binding site|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.1080.10|PF01144|PS01273|PTHR13707|SM00882|SSF100950|TIGR02429 METD_RS16640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004165|IPR012791 3-oxoacid CoA-transferase, subunit B|Coenzyme A transferase family I GO:0008152|GO:0008410 G3DSA:3.40.810.20|PF01144|PTHR13707|SM00882|SSF100950|TIGR02428 METD_RS16655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219|PTHR34219:SF2 METD_RS16660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|SSF56935 METD_RS16670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS16675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF3|SSF81345 METD_RS16680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 METD_RS16685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552 METD_RS16690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN domain-like|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|SSF88723 METD_RS16695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 METD_RS16705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|SM00014|SSF48317 METD_RS16710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|PTHR23024:SF41|SSF53474 METD_RS16715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001678|IPR018314|IPR023267|IPR029063 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type GO:0003723|GO:0008168 G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01189|PR02008|PS01153|PTHR22807|PTHR22807:SF33|SSF53335 METD_RS16725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|PTHR21708|PTHR21708:SF26|SSF48179|SSF51735|TIGR00745 METD_RS16740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|PTHR11911|PTHR11911:SF6|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 METD_RS16745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 PF01098|PTHR30474|PTHR30474:SF2 METD_RS16750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756|TIGR01133 METD_RS16755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082 METD_RS16760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13560|SSF47413 METD_RS16765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|SSF143011 METD_RS16770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF4|SSF56176|SSF56194|TIGR00179 METD_RS16775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PS00844|PTHR23132|SSF52440|SSF56059|TIGR01205 METD_RS16780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005548|IPR013685|IPR026579 Cell division protein FtsQ|Cell division protein FtsQ/DivIB|Polypeptide-transport-associated, FtsQ-type GO:0000917 MF_00911|PF03799|PF08478|PTHR35851|PTHR35851:SF1 METD_RS16785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF4|SM00842|SSF53067|TIGR01174 METD_RS16790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000158|IPR003008|IPR008280|IPR017844|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, C-terminal extension|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0000910|GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065|TIGR03483 METD_RS16795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|PTHR33694|PTHR33694:SF1|SSF54211|TIGR00325 METD_RS16800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|PTHR37423|SSF48452|TIGR03302 METD_RS16805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13704|SSF53448 METD_RS16810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|PTHR11059|SSF52540|TIGR00634 METD_RS16815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 PF03979 METD_RS16820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008024 YiaAB two helix PF05360|PTHR37290|PTHR37290:SF1 METD_RS16825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007157 PspA/IM30 PF04012|PTHR31088|PTHR31088:SF0 METD_RS16830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006656|IPR006657|IPR009010|IPR010046 Aspartate decarboxylase-like domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PIRSF000144|PTHR11615|PTHR11615:SF114|SSF50692|SSF53706|TIGR01701 METD_RS16840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR02350 METD_RS16845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF231|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 METD_RS16850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 METD_RS16860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000053|IPR000312|IPR013102|IPR013465|IPR017459|IPR018090 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3|Pyrimidine nucleoside phosphorylase, C-terminal|Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic|Thymidine phosphorylase|Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206|GO:0006213|GO:0008152|GO:0009032|GO:0016154|GO:0016757|GO:0016763 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|G3DSA:3.90.1170.30|PF00591|PF02885|PF07831|PIRSF000478|PTHR10515|PTHR10515:SF0|SM00941|SSF47648|SSF52418|SSF54680|TIGR02643|TIGR02644 METD_RS16865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002915|IPR011343|IPR013785 Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase|Deoxyribose-phosphate aldolase GO:0003824|GO:0004139|GO:0005737|GO:0009264|GO:0016829 G3DSA:3.20.20.70|PF01791|PIRSF001357|PTHR10889|PTHR10889:SF3|SM01133|SSF51569|TIGR00126 METD_RS16870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000845|IPR001369|IPR011268|IPR011269 Nucleoside phosphorylase domain|PNP/MTAP phosphorylase|Purine nucleoside phosphorylase|Putative purine nucleotide phosphorylase GO:0003824|GO:0004731|GO:0006139|GO:0009116 G3DSA:3.40.50.1580|PF01048|PIRSF000477|PTHR11904|PTHR11904:SF9|SSF53167|TIGR01697|TIGR01698 METD_RS16875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002125|IPR006262|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase, homotetrameric|Cytidine deaminase-like GO:0003824|GO:0004126|GO:0008270|GO:0009972|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|PTHR11644|SSF53927|TIGR01354 METD_RS16880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018661 Protein of unknown function DUF2093 PF09866 METD_RS16885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 MF_00409|PF02606|PTHR30160|PTHR30160:SF13|SSF52540|TIGR00682 METD_RS16890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PF04413|PTHR23417|PTHR23417:SF2 METD_RS16895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007172 Domain of unknown function DUF374 PD032436|PF04028 METD_RS16900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR12905|PTHR12905:SF17|SSF56300 METD_RS16905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS16910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002059|IPR011129|IPR012340 Cold shock protein|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PR00050|PTHR11544|SM00357|SSF50249 METD_RS16915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20 METD_RS16920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000819|IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.630.10|PF00883|PR00481|PS00631|PTHR11963|PTHR11963:SF13|SSF53187 METD_RS16925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR014596|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Uncharacterised conserved protein UCP035836 GO:0005515 G3DSA:1.25.40.10|PF14559|PIRSF035836|PTHR23083|SM00028|SSF48452 METD_RS16930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|PTHR13528|SSF143800|TIGR00009 METD_RS16935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR36838 METD_RS16940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001412|IPR002904|IPR008925|IPR014729|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Lysine-tRNA ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:1.10.10.350|G3DSA:3.40.50.620|MF_00177|PF01921|PS00178|PTHR37940|SSF48163|SSF52374|TIGR00467 METD_RS16945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021257 Protein of unknown function DUF2809 PF10990 METD_RS16950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000352|IPR004374|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF6|SM00937|SSF75620|TIGR00020 METD_RS16955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 METD_RS16960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 METD_RS16965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025263|IPR032712 AsmA-like, C-terminal|Domain of unknown function DUF3971 PF13116|PF13502 METD_RS16970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005804 Fatty acid desaturase domain GO:0006629 PF00487|PTHR19353|PTHR19353:SF27 METD_RS16975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024107 Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02006|PF00579|PR01040|PTHR11766|SSF52374|SSF55174|TIGR00234 METD_RS16980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|PTHR30605|SSF53067 METD_RS16985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021961 Protein of unknown function DUF3578 PF12102 METD_RS16990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982|IPR014057 Addiction module antidote protein, HI1420|Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR40275|PTHR40275:SF1|SSF47413|TIGR02684 METD_RS16995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033 METD_RS17000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000422|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00180|PF00925|PF00926|PIRSF001259|PTHR21327|PTHR21327:SF10|SSF142695|SSF55821|TIGR00506 METD_RS17005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PD057827 METD_RS17010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF104|SSF52768 METD_RS17015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS17025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR001882|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin-binding site|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02785|PF02786|PS00188|PS00866|PS00867|PTHR18866|PTHR18866:SF92|SM00878|SSF51230|SSF51246|SSF52440|SSF56059 METD_RS17030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013024|IPR017939 Butirosin biosynthesis, BtrG-like|Gamma-glutamylcyclotransferase GO:0003839|GO:0006750 G3DSA:3.10.490.10|PF13772|PTHR12935|SSF110857 METD_RS17040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001792|IPR020456 Acylphosphatase|Acylphosphatase-like domain GO:0003998 G3DSA:3.30.70.100|PF00708|PR00112|PTHR10029|SSF54975 METD_RS17045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006747 Protein of unknown function DUF599 PF04654|PTHR31881|PTHR31881:SF3 METD_RS17050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR021660 Protein of unknown function DUF3253|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF11625|SSF46785 METD_RS17055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF1 METD_RS17060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|PTHR11260:SF157|SSF47616|SSF52833 METD_RS17065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003739|IPR007197|IPR013785|IPR022447|IPR025895 Aldolase-type TIM barrel|Lysine-2,3-aminomutase, C-terminal domain|Lysine-2,3-aminomutase-related|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF12544|PIRSF004911|PTHR30538|PTHR30538:SF1|SSF102114|TIGR00238|TIGR03822 METD_RS17070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004364|IPR004525|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Elongation factor P--(R)-beta-lysine ligase|Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:3.30.930.10|PF00152|PR00982|PTHR22594|PTHR22594:SF7|SSF55681|TIGR00462 METD_RS17075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|PTHR30053:SF1|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 METD_RS17080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012429 Protein of unknown function DUF1624 PF07786 METD_RS17085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002059|IPR011129|IPR012340 Cold shock protein|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PR00050|PTHR11544|PTHR11544:SF43|SM00357|SSF50249 METD_RS17090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003795 Protein of unknown function DUF192 PF02643|PTHR37953|PTHR37953:SF1 METD_RS17095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035|IPR027417 P-loop containing nucleoside triphosphate hydrolase|von Willebrand factor, type A G3DSA:1.10.8.80|G3DSA:3.40.50.300|G3DSA:3.40.50.410|PF13519|PTHR10338|PTHR10338:SF126|SM00327|SSF52540|SSF53300 METD_RS17100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR017497|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Putative magnesium chelatase accessory protein G3DSA:3.40.50.1820|PF12697|PR00111|PTHR10992|SSF53474|TIGR03056 METD_RS17105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR008150|IPR014105|IPR023753 Amine oxidase|Carotenoid/retinoid oxidoreductase|FAD/NAD(P)-binding domain|Phytoene dehydrogenase, bacterial-type, conserved site GO:0016117|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PS00982|PTHR10668|PTHR10668:SF4|SSF51905|TIGR02734 METD_RS17110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002060|IPR008949|IPR019845 Isoprenoid synthase domain|Squalene/phytoene synthase|Squalene/phytoene synthase, conserved site GO:0009058|GO:0016740|GO:0016765 G3DSA:1.10.600.10|PF00494|PS01044|PS01045|PTHR31480|PTHR31480:SF0|SSF48576 METD_RS17115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|PTHR31715|SSF52540|TIGR00101 METD_RS17120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467|PTHR33620 METD_RS17125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|G3DSA:3.30.70.790|MF_00822|PF02814|PF05194|PIRSF036402|SM00988|SSF69287|SSF69737 METD_RS17130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002636 Protein from unkown function DUF29 PF01724|PTHR34235|PTHR34235:SF3 METD_RS17135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PS01120|PTHR22642|PTHR22642:SF7|SSF51338|SSF51556|TIGR01792 METD_RS17140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003607 HD/PDEase domain PF13328|PTHR21262|SM00471|SSF109604 METD_RS17145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002019|IPR002026|IPR008223|IPR012010 Urease, beta subunit|Urease, gamma subunit|Urease, gamma-beta subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:2.10.150.10|G3DSA:3.30.280.10|MF_00739|PD002319|PF00547|PF00699|PIRSF001225|PTHR33569|PTHR33569:SF1|SSF51278|SSF54111|TIGR00192|TIGR00193 METD_RS17150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774|PTHR33643|PTHR33643:SF1 METD_RS17155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002563|IPR012349|IPR019917 FMN reductase (NADH) RutF|FMN-binding split barrel|Flavin reductase like domain GO:0008752|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|MF_00833|PF01613|PTHR30466|PTHR30466:SF2|SM00903|SSF50475 METD_RS17165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily G3DSA:2.60.40.180|SSF49472 METD_RS17170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PTHR11271|PTHR11271:SF37|SSF51338|SSF51556 METD_RS17180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011681 GcrA cell cycle regulator PF07750 METD_RS17185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF77|SSF51735 METD_RS17190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 METD_RS17210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000634|IPR001721|IPR001926|IPR005787 ACT-like domain|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, biosynthetic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0009097|GO:0030170 G3DSA:3.40.1020.10|G3DSA:3.40.50.1100|PF00291|PF00585|PS00165|PTHR10314|PTHR10314:SF30|SSF53686|SSF55021|TIGR01124 METD_RS17220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007236 SlyX G3DSA:1.20.5.300|MF_00715|PF04102|PTHR36508 METD_RS17225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 METD_RS17230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000962|IPR012784|IPR020458 RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 MF_00926|PF01258|PS01102|PTHR33823|PTHR33823:SF2|SSF109635|SSF57716|TIGR02420 METD_RS17245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217|PTHR13285|PTHR13285:SF23 METD_RS17255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019704 Flagellar assembly regulator FliX, class II PF10768 METD_RS17260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010|PTHR30381|PTHR30381:SF0 METD_RS17265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019301 Flagellar protein FlgJ, N-terminal PF10135 METD_RS17275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008|PTHR34933|PTHR34933:SF1 METD_RS17280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|PTHR36307|SM00858|TIGR03170 METD_RS17285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF19|SSF117143|TIGR02488|TIGR03506 METD_RS17290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001444|IPR010930|IPR012836|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF18|SSF117143|TIGR02490|TIGR03506 METD_RS17295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748|PTHR35091 METD_RS17300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PR00955|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039|TIGR01397 METD_RS17310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.25.60.10|SSF158791 METD_RS17315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000889|IPR012336|IPR029759 Glutathione peroxidase|Glutathione peroxidase active site|Thioredoxin-like fold GO:0004602|GO:0006979|GO:0055114 G3DSA:3.40.30.10|PF00255|PIRSF000303|PR01011|PS00460|PTHR11592|SSF52833 METD_RS17320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010642 Invasion protein B PF06776 METD_RS17325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR011757|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Lytic transglycosylase MltB|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|PTHR30163|PTHR30163:SF2|SSF47090|SSF53955|TIGR02283 METD_RS17330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003680|IPR029039 Flavodoxin-like fold|Flavoprotein-like domain G3DSA:3.40.50.360|PF02525|PTHR10204|PTHR10204:SF0|SSF52218 METD_RS17335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000640|IPR005517|IPR009022|IPR014721|IPR020568 Elongation factor G, III-V domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2, domain IV GO:0005525 G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|PF00679|PF03764|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF54211|SSF54980 METD_RS17340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|PTHR33337|PTHR33337:SF4|SSF51316 METD_RS17345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001991|IPR018107|IPR023954 C4-dicarboxylate transport protein|Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0006835|GO:0015293|GO:0016021 G3DSA:1.10.3860.10|MF_01300|PF00375|PR00173|PS00713|PS00714|PTHR11958|PTHR11958:SF49|SSF118215 METD_RS17350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358|IPR017055|IPR029151 Histidine kinase-like ATPase, C-terminal domain|Periplasmic sensor domain-like|Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator)|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PIRSF036431|PR00344|PTHR24423|PTHR24423:SF451|SM00387|SM00388|SSF103190|SSF47384|SSF55874 METD_RS17355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF11|SM00382|SM00448|SSF46689|SSF52172|SSF52540 METD_RS17360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS17365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR013655|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF01590|PF08447|PF12860|PF13188|PTHR10799|PTHR10799:SF657|SM00052|SM00065|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 METD_RS17370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR017959|IPR018027 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 MF_00121|PF02637|PF02934|PS01234|PTHR11659|PTHR11659:SF0|SM00845|SSF55931|SSF89095|TIGR00133 METD_RS17375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|PTHR11562|PTHR11562:SF55|SSF160240|SSF161111|TIGR01297 METD_RS17390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF90|SSF51905 METD_RS17395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113 METD_RS17400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025184 Domain of unknown function DUF4111 G3DSA:3.30.460.10|PF13427|SSF81301 METD_RS17405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 METD_RS17425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001245|IPR001611|IPR003591|IPR011009|IPR017441|IPR032675 Leucine-rich repeat|Leucine-rich repeat domain, L domain-like|Leucine-rich repeat, typical subtype|Protein kinase, ATP binding site|Protein kinase-like domain|Serine-threonine/tyrosine-protein kinase catalytic domain GO:0004672|GO:0005515|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.80.10.10|PF07714|PF13855|PS00107|PTHR23155|PTHR23155:SF644|SM00369|SSF52058|SSF56112 METD_RS17430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007899|IPR023577|IPR033469 CHAD domain|CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PF01928|PF05235|PTHR39569|PTHR39569:SF1|SM00880|SM01118|SSF55154 METD_RS17435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012042|IPR023577|IPR033469 CYTH domain|CYTH-like domain|Inorganic triphosphatase NeuTTM/CthTTM-like G3DSA:2.40.320.10|PF01928|PIRSF016487|PTHR40114|SM01118|SSF55154 METD_RS17440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR032710 NTF2-like domain|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|G3DSA:3.10.450.50|PF04542|PF08281|PTHR30173|PTHR30173:SF11|SSF54427|SSF88659|SSF88946 METD_RS17445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003779|IPR004675|IPR029032 AhpD-like|Alkylhydroperoxidase AhpD core|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|SSF69118|TIGR00778 METD_RS17450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|PTHR38599|PTHR38599:SF1|SSF51182 METD_RS17455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR001054|IPR012675|IPR029787 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adenylyl cyclase class-3/4/guanylyl cyclase|Beta-grasp domain|Nucleotide cyclase GO:0009055|GO:0009190|GO:0016849|GO:0035556|GO:0051536 G3DSA:3.10.20.30|G3DSA:3.30.70.1230|PF00111|PF00211|PTHR11920|PTHR11920:SF325|SM00044|SSF54292|SSF55073|SSF81343 METD_RS17460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF859|SSF53474 METD_RS17465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011042|IPR017996 Major royal jelly protein/Protein yellow|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF03022|PTHR10009|SSF101898 METD_RS17480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 MF_01129|PF03030|PIRSF001265|PTHR31998|PTHR31998:SF0|TIGR01104 METD_RS17495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF302|SSF53383 METD_RS17505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR010941|IPR010963|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Poly(R)-hydroxyalkanoic acid synthase, class I|Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0005737|GO:0016746|GO:0042619 G3DSA:3.40.50.1820|PF00561|PF07167|PTHR36837|PTHR36837:SF2|SSF53474|TIGR01838 METD_RS17510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003148|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|PTHR16254|PTHR16254:SF17|SSF51735 METD_RS17515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000792|IPR011991|IPR016032 PAS domain|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|PR00038|SM00421|SSF46894|SSF55785 METD_RS17520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008909|IPR009080|IPR015944 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|DALR anticodon binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004812|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006420|GO:0006426 G3DSA:1.10.730.10|MF_00255|PF02092|PF05746|PR01045|PTHR30075|PTHR30075:SF2|SSF109604|TIGR00211 METD_RS17525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008557|IPR011042 Protein of unknown function DUF839|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF05787|PTHR35399|PTHR35399:SF2|SSF63829 METD_RS17530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024289 Domain of unknown function DUF3828 PF12883 METD_RS17535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|PTHR30075|SSF55681|TIGR00388 METD_RS17545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|SSF46689|SSF48498 METD_RS17550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009783|IPR032710 NTF2-like domain|Protein of unknown function DUF1348 G3DSA:3.10.450.50|PF07080|PTHR31757|PTHR31757:SF0|SSF54427 METD_RS17560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002142|IPR029045 ClpP/crotonase-like domain|Peptidase S49 GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR30341|PTHR30341:SF1|SSF52096 METD_RS17565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002052|IPR007848|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF05175|PS00092|PTHR18895|PTHR18895:SF75|SSF53335 METD_RS17570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007864|IPR011322|IPR018551 Domain of unknown function DUF2007|Nitrogen regulatory PII-like, alpha/beta|Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 G3DSA:3.30.70.790|PF09413|SSF54913 METD_RS17575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF47|SSF48576 METD_RS17580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060 METD_RS17585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 METD_RS17590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS17595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS17600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 METD_RS17605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13414|PF13432|PTHR23083|SM00028|SSF48452 METD_RS17635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001107|IPR001972 Band 7 domain|Stomatin family GO:0016020 PF01145|PTHR10264|PTHR10264:SF46|SM00244|SSF117892 METD_RS17640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005898|IPR011527|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter-like|Cyclic peptide transporter|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0015197|GO:0015833|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PTHR24220|PTHR24220:SF425|SM00382|SSF52540|SSF90123|TIGR01194 METD_RS17650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like G3DSA:3.40.50.1010|PF01850|PTHR36173|PTHR36173:SF2|SSF88723 METD_RS17655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|PTHR10169:SF45|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01055 METD_RS17665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR026273 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Low specificity L-threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004793|GO:0006520|GO:0006567|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF038940|PTHR10289|PTHR10289:SF8|SSF53383 METD_RS17670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 METD_RS17675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PTHR23539|PTHR23539:SF1|SSF103473 METD_RS17680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|PTHR36505|PTHR36505:SF2|SSF50346 METD_RS17690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|PTHR36505|PTHR36505:SF1|SSF50346 METD_RS17695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003121|IPR019835 SWIB domain|SWIB/MDM2 domain GO:0005515 G3DSA:1.10.245.10|PF02201|PTHR13844|SM00151|SSF47592 METD_RS17700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|PTHR24322:SF25|SSF51735 METD_RS17705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF5|SSF103473 METD_RS17710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF698|SSF53474 METD_RS17715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|PTHR22981|PTHR22981:SF62|SSF48179|SSF51735 METD_RS17720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|PTHR11260:SF178|SSF47616|SSF52833 METD_RS17735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 G3DSA:3.30.160.190|PF04800|PTHR12219|PTHR12219:SF18 METD_RS17740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002125|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|PTHR11079|PTHR11079:SF25|SSF53927 METD_RS17745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023805 Uncharacterised protein family, spore photo-product lyase-related PTHR37822|PTHR37822:SF2|TIGR03886 METD_RS17750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018649 SHOCT domain PF09851 METD_RS17755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02922|PTHR10357|PTHR10357:SF74|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 METD_RS17760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS17770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004790|IPR019818|IPR024084 Isocitrate dehydrogenase NADP-dependent|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006102|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PIRSF000108|PS00470|PTHR11822|SM01329|SSF53659|TIGR00127 METD_RS17780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014826|IPR020568 Formaldehyde-activating enzyme|Ribosomal protein S5 domain 2-type fold GO:0016051|GO:0016840 G3DSA:3.30.230.60|PF08714|SSF54211 METD_RS17785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010985|IPR022789 Antitoxin ParD|Ribbon-helix-helix GO:0006355 PF03693|SSF47598|TIGR02606 METD_RS17790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016 METD_RS17795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS17800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS17805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001537|IPR004384|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase TrmH, group 1|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PIRSF004808|PTHR12029|SSF75217|TIGR00050 METD_RS17815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF419|SM00829|SSF50129|SSF51735 METD_RS17820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR024478 4HB MCP domain|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS17825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR36699|SSF141523 METD_RS17830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PTHR11808|PTHR11808:SF12|SSF53383|TIGR01326 METD_RS17835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS17840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004017|IPR012257|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cysteine-rich domain|Glycolate oxidase, iron-sulphur subunit G3DSA:1.10.1060.10|PF02754|PF12838|PIRSF000139|PS00198|PTHR32479|PTHR32479:SF2|SSF54862 METD_RS17850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|SSF53474 METD_RS17855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR011545|IPR013701|IPR014001|IPR017170|IPR026362|IPR027417 DEAD/DEAH box helicase domain|DEAD/H associated|DEXH box helicase, DNA ligase-associated|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Lhr-like ATP-dependent RNA helicase, predicted|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524|GO:0016818 G3DSA:3.40.50.300|PF00270|PF00271|PF08494|PIRSF037307|PTHR24031|PTHR24031:SF122|SM00487|SM00490|SSF52540|TIGR04121 METD_RS17860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR024173|IPR026336|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Metallophosphoesterase, DNA ligase-associated|Phosphoesterase, MJ0037 GO:0016787 G3DSA:3.60.21.10|PF00149|PIRSF000887|PTHR39323|PTHR39323:SF1|SSF56300|TIGR04123 METD_RS17865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021836 Protein of unknown function DUF3429 PF11911|PTHR15887 METD_RS17870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|PTHR11689|SSF81340 METD_RS17875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009760 Protein of unknown function DUF1328 GO:0005886 MF_01361|PF07043|PIRSF036466 METD_RS17880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24320|SSF51735 METD_RS17885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|PTHR30270|PTHR30270:SF0|SSF55326|SSF56042|TIGR01379 METD_RS17890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951 METD_RS17895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114 METD_RS17900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000537|IPR023214 HAD-like domain|UbiA prenyltransferase family GO:0004659|GO:0016021 G3DSA:3.40.50.1000|PF01040|PTHR11048|PTHR11048:SF5|SSF56784 METD_RS17905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PF04138 METD_RS17920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|PTHR21098|SSF63380|TIGR00187 METD_RS17925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002125|IPR002734|IPR004794|IPR016193|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PTHR11079|PTHR11079:SF10|SSF53597|SSF53927|TIGR00326 METD_RS17930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|PTHR30455|PTHR30455:SF2|TIGR00244 METD_RS17935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000944|IPR011991|IPR030489 Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PS01332|PTHR33221|PTHR33221:SF4|SSF46785|TIGR00738 METD_RS17940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|SSF53383 METD_RS17945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430 METD_RS17950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430 METD_RS17955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000454|IPR002379 ATPase, F0 complex, subunit C|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PTHR10031|SSF81333 METD_RS17960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|PTHR11410:SF6|SSF81336|TIGR01131 METD_RS17965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016989|IPR032820 ATP synthase protein I, alphaproteobacterial|Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PF09527|PIRSF032126 METD_RS17970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336|IPR019546 Thioredoxin-like fold|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal G3DSA:3.40.30.10|PF13462|PTHR13887|SSF52833|TIGR01409 METD_RS17975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007922|IPR010593 Protein of unknown function DUF1159|Protein of unknown function DUF721/UPF0232 PF05258|PIRSF032064 METD_RS17980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000445|IPR003265|IPR004035|IPR004036|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF14815|PS00764|PS01155|PTHR10359|SM00478|SSF48150|SSF55811|TIGR01084 METD_RS17985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001091|IPR002052|IPR002941|IPR029063 DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF01555|PR00508|PS00092|PTHR13370|PTHR13370:SF8|SSF53335 METD_RS17990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain G3DSA:2.40.40.10|PF03330|PTHR34183|PTHR34183:SF2|SSF50685|TIGR00413 METD_RS17995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013433 Putative polyhydroxyalkanoic acid system protein PF09650 METD_RS18005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF16326|PS00211|PTHR19211|PTHR19211:SF45|SM00382|SSF52540 METD_RS18010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 METD_RS18015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|SSF103088 METD_RS18020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PTHR11920|PTHR11920:SF348|SM00044|SSF55073 METD_RS18025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF13023|PTHR11845|SSF109604 METD_RS18030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000189|IPR008258|IPR008939|IPR016026|IPR023346 Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0004553|GO:0008933|GO:0016020|GO:0042597 G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PS00922|PTHR21666|PTHR21666:SF223|SSF48435|SSF53955 METD_RS18035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 METD_RS18040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 METD_RS18045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936|PTHR35458|PTHR35458:SF1 METD_RS18050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000836|IPR006273|IPR023031|IPR029057 Orotate phosphoribosyltransferase|Orotate phosphoribosyltransferase, bacterial|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116|GO:0019856 G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|SSF53271|TIGR01367 METD_RS18060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 METD_RS18065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|PTHR34476|SM01409|SSF63562|TIGR00690 METD_RS18070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001075|IPR014824|IPR017065 NFU1 iron-sulfur cluster scaffold homologue|NIF system FeS cluster assembly, NifU, C-terminal|Scaffold protein Nfu/NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.30.1370.70|PD002830|PF01106|PF08712|PIRSF036773|PTHR11178|PTHR11178:SF1|SM00932|SSF110836|SSF117916 METD_RS18075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|PTHR11735|PTHR11735:SF11|SSF53067|TIGR03725 METD_RS18080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|PTHR23091:SF247|SSF55729 METD_RS18085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF8|SM00563|SSF69593 METD_RS18090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR013978 MEKHLA|PAS domain G3DSA:3.30.450.20|PF08670|SSF55785|TIGR00229 METD_RS18095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 METD_RS18100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SSF52540 METD_RS18105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PTHR22881|SSF55486|TIGR00043 METD_RS18110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PTHR22777|PTHR22777:SF17|SM00116|SM01091|SSF54631|SSF56176 METD_RS18115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|PTHR23088|PTHR23088:SF29|SSF56317|TIGR00546 METD_RS18120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012413 BA14k family GO:0009405 PF07886 METD_RS18125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024711 Catalase active site|Catalase core domain|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clades 1 and 3|Catalase-like domain GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|PF00199|PF06628|PIRSF038928|PR00067|PS00438|PTHR11465|SM01060|SSF56634 METD_RS18130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|PTHR30346:SF15|SSF46785|SSF53850 METD_RS18135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007820|IPR017516 AbrB duplication|AbrB family GO:0010468|GO:0016021 PF05145|PIRSF038991|PTHR38457|PTHR38457:SF1|TIGR03082 METD_RS18140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 G3DSA:1.10.3830.10|PF01219|PTHR34299|PTHR34299:SF1 METD_RS18155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like G3DSA:3.60.21.10|PF12850|SSF56300 METD_RS18160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001920|IPR004391|IPR015942|IPR018187 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PTHR21198|PTHR21198:SF2|SSF53681|TIGR00067 METD_RS18165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005532|IPR016187|IPR017806|IPR024775 C-type lectin fold|DinB-like domain|Ergothioneine biosynthesis protein EgtB|Sulfatase-modifying factor enzyme GO:0052699 G3DSA:3.90.1580.10|PF03781|PF12867|PTHR23150|PTHR23150:SF24|SSF56436|TIGR03440 METD_RS18170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017804|IPR019257|IPR029063 Histidine-specific methyltransferase, SAM-dependent|Methyltransferase EgtD-like|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF10017|PIRSF018005|PTHR30468|PTHR30468:SF6|SSF53335|TIGR03438 METD_RS18175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR006026|IPR011049|IPR013320|IPR013858|IPR018511|IPR024079 Concanavalin A-like lectin/glucanase domain|Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Metallopeptidase, catalytic domain|Peptidase M10 serralysin, C-terminal|Peptidase, metallopeptidase|Serralysin-like metalloprotease, C-terminal GO:0005509|GO:0005615|GO:0006508|GO:0008237|GO:0008270 G3DSA:2.150.10.10|G3DSA:3.40.390.10|PF00353|PF08548|PR00313|PS00330|SM00235|SSF49899|SSF51120|SSF55486 METD_RS18180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008497 Protein of unknown function DUF779 PF05610|PIRSF009151 METD_RS18185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006656|IPR006657|IPR006963|IPR007419|IPR009010|IPR027467 Aspartate decarboxylase-like domain|BFD-like [2Fe-2S]-binding domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04324|PF04879|PS00551|PTHR11615|PTHR11615:SF119|SM00926|SSF50692|SSF53706 METD_RS18190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478 NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|PF00590|PF10414|PF13241|PIRSF036426|PS00839|PTHR21091|PTHR21091:SF16|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 METD_RS18195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|PTHR12151|SSF52833 METD_RS18200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR10587|PTHR10587:SF79|SSF53448 METD_RS18205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR18966|PTHR18966:SF216|SM00062|SSF53850 METD_RS18215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025356 Protein of unknown function DUF4260 PF14079 METD_RS18220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035|IPR006538|IPR025861 Cobalamin biosynthesis protein CobT VWA domain|Cobalt chelatase, CobT subunit|von Willebrand factor, type A GO:0009236 G3DSA:3.40.50.410|PF06213|PF11775|PIRSF031715|SM00327|SSF53300|TIGR01651 METD_RS18225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR006537|IPR011704|IPR013615|IPR025865|IPR027417 AAA+ ATPase domain|ATPase, dynein-related, AAA domain|CbbQ/NirQ/NorQ, C-terminal|Cobaltochelatase subunit CobS|Cobaltochelatase subunit CobS N-terminal domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF07728|PF08406|PF12556|SM00382|SSF52540|TIGR01650 METD_RS18230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PR00625|SM00271|SSF46565 METD_RS18235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002634 BolA protein G3DSA:3.30.70.1500|PF01722|PIRSF003113|PTHR12735|PTHR12735:SF3|SSF82657 METD_RS18240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 G3DSA:3.30.160.200|PF00472|PS00745|PTHR11075|SSF75620 METD_RS18245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912|PTHR37314 METD_RS18250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase|Tetratricopeptide-like helical domain GO:0005515|GO:0008152|GO:0008168 G3DSA:1.25.40.10|G3DSA:3.40.50.150|PF08241|PF13428|PTHR10108|SSF48452|SSF53335 METD_RS18255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR026360 Metallo-beta-lactamase|Putative exonuclease, DNA ligase-associated G3DSA:3.60.15.10|PTHR11203|PTHR11203:SF35|SSF56281|TIGR04122 METD_RS18260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012309|IPR012310|IPR012340|IPR016059|IPR026333 ATP-dependent DNA ligase, PP_1105 family|DNA ligase, ATP-dependent, C-terminal|DNA ligase, ATP-dependent, central|DNA ligase, ATP-dependent, conserved site|Nucleic acid-binding, OB-fold GO:0003909|GO:0003910|GO:0005524|GO:0006281|GO:0006310|GO:0051103 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF04679|PS00697|PTHR10459|PTHR10459:SF10|SSF50249|SSF56091|TIGR04120 METD_RS18265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PTHR30615|SSF111038|TIGR00149 METD_RS18270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PTHR30615|SSF111038 METD_RS18275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657|PTHR34821 METD_RS18285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001753|IPR006108|IPR006176|IPR006180|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|3-hydroxyacyl-CoA dehydrogenase, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|PS00067|PTHR23309|PTHR23309:SF6|SSF48179|SSF51735|SSF52096 METD_RS18290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|PTHR33121|PTHR33121:SF15|SM00052|SSF141868 METD_RS18300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF12|SSF53901|TIGR01930 METD_RS18305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR020953|IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain|Acyl-CoA dehydrogenase, N-terminal, bacteria|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12418|PF12806|PTHR10909|PTHR10909:SF154|SSF47203|SSF56645 METD_RS18310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 METD_RS18320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR031811 AlgX, SGNH hydrolase-like domain PF16822 METD_RS18325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase G3DSA:3.90.1140.10|PF13563|SSF55144 METD_RS18330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317 METD_RS18335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000683|IPR004104|IPR008354|IPR016040 Glucose-fructose oxidoreductase, bacterial|NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PR01775|PTHR22604|PTHR22604:SF125|SSF51735|SSF55347 METD_RS18340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|SSF63411 METD_RS18345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000634|IPR001926|IPR004450|IPR029144 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase, N-terminal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0006520|GO:0030170 G3DSA:3.40.50.1100|G3DSA:3.90.1380.10|PF00291|PF14821|PS00165|PTHR10314|PTHR10314:SF1|SSF53686|TIGR00260 METD_RS18350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032347|IPR032710 NTF2-like domain|Protein of unknown function DUF4864 PF16156|SSF54427 METD_RS18355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104|PTHR23427|PTHR23427:SF2 METD_RS18360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009325 Protein of unknown function DUF983 PF06170 METD_RS18365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000298|IPR013833|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.10.287.70|G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF7|SSF81452 METD_RS18370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007533|IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11|Cytochrome c oxidase assembly protein CtaG/Cox11, domain GO:0005507 G3DSA:2.60.370.10|MF_00155|PF04442|PIRSF005413|PTHR21320|PTHR21320:SF3|SSF110111 METD_RS18380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000537|IPR006369|IPR030470 Protohaem IX farnesyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0008495|GO:0016021|GO:0048034 MF_00154|PF01040|PS00943|PTHR11048|PTHR11048:SF3|TIGR01473 METD_RS18385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000883|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0022900|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF27|SSF81442|TIGR02891 METD_RS18390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001505|IPR002429|IPR008972|IPR011759|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II GO:0004129|GO:0005507|GO:0016020|GO:0016021|GO:0016491|GO:0022900 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF02790|PR01166|PS00078|PTHR22888|SSF49503|SSF81464|TIGR02866 METD_RS18395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|PTHR30592|PTHR30592:SF1|SSF53927|TIGR00129 METD_RS18405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|PTHR11938|PTHR11938:SF1|SSF51395|SSF56235|SSF69336 METD_RS18410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006005|IPR009051|IPR016040|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, NADH/NADPH, small subunit 1|NAD(P)-binding domain GO:0006537|GO:0016491|GO:0016639|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|PTHR11938|PTHR11938:SF75|SSF46548|SSF51971|TIGR01317 METD_RS18415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018656 Domain of unknown function DUF2087 PF09860 METD_RS18420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR23200|PTHR23200:SF46|SM00849|SSF56281 METD_RS18425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF07730|PTHR24421|PTHR24421:SF1|SM00387|SSF55874 METD_RS18430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF210|SM00421|SM00448|SSF46894|SSF52172 METD_RS18435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007407|IPR013830 Protein of unknown function DUF459|SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF04311|SSF52266 METD_RS18440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR011757|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Lytic transglycosylase MltB|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|PTHR30163|PTHR30163:SF2|SSF47090|SSF53955|TIGR02283 METD_RS18445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR005886|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|UDP-glucose 4-epimerase GalE GO:0003824|GO:0003978|GO:0006012|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 METD_RS18450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF14|SSF53448|TIGR01099 METD_RS18455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002508|IPR007709 Cell wall hydrolase/autolysin, catalytic|N-formylglutamate amidohydrolase GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF05013|SSF53187 METD_RS18460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF481|SM00448|SSF52172 METD_RS18465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002109|IPR011767|IPR011900|IPR012336|IPR014025 Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|PS00195|PTHR10168|SSF52833|TIGR02181 METD_RS18470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001110|IPR003010 Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS01227|PTHR23088|PTHR23088:SF27|SSF56317 METD_RS18475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009562 Protein of unknown function DUF1178 PF06676|PIRSF032131 METD_RS18480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR011495 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF07568|PF13426|PF13581|PTHR24351|SM00086|SM00091|SM00387|SSF55785|SSF55874|TIGR00229 METD_RS18485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF36|SSF55068|TIGR00401 METD_RS18490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005134|IPR020761|IPR020765 Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MF_00143|PF03350|PTHR38596|PTHR38596:SF1|TIGR00645 METD_RS18495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005073|IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 G3DSA:3.30.1380.10|PF03411|PIRSF018455|SSF55166 METD_RS18500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011033|IPR027275 PRC-barrel domain|PRC-barrel-like G3DSA:2.30.30.240|PF05239|PTHR36505|PTHR36505:SF1|SSF50346 METD_RS18510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004670|IPR023171 Na+/H+ antiporter NhaA|Na/H antiporter domain GO:0006814|GO:0006885|GO:0016021 G3DSA:1.20.1530.10|MF_01844|PF06965|PTHR30341|PTHR30341:SF0|TIGR00773 METD_RS18515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000866|IPR005746|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10438|PTHR10438:SF244|SSF52833 METD_RS18520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF3|SSF48557|TIGR00838 METD_RS18540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF9|SSF56784|TIGR01509 METD_RS18545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003696|IPR031730 Carbamoyltransferase|Carbamoyltransferase, C-terminal GO:0003824|GO:0009058 PF02543|PF16861|PTHR34847|SSF53067 METD_RS18555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006328|IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Haloacid dehalogenase, type II|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787|GO:0019120 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR12725|PTHR12725:SF58|SSF56784|TIGR01428|TIGR01493 METD_RS18560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PIRSF002869|PR01806|PTHR11206|PTHR11206:SF90|TIGR01695 METD_RS18565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF8|SSF46609|SSF54719 METD_RS18575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR011102|IPR013655 PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|PF07536|PF08447|PF13188|PTHR41523|SM00086|SM00091|SM00911|SSF55785|TIGR00229 METD_RS18580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR22916|SSF53448 METD_RS18585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|SSF53448 METD_RS18590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF9 METD_RS18595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SSF50199 METD_RS18600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 METD_RS18605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|PTHR11964:SF1|SSF55973|TIGR01034 METD_RS18610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|PTHR23417|PTHR23417:SF14|SSF53335|TIGR00091 METD_RS18615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013498|IPR013824|IPR013825|IPR023405|IPR023406|IPR025589|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|Topoisomerase C-terminal repeat|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PF13368|PR00417|PS00396|PTHR11390|PTHR11390:SF27|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 METD_RS18620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|PTHR19372|PTHR19372:SF9|SSF56524 METD_RS18625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|PTHR30485|PTHR30485:SF1|SSF81342 METD_RS18635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 METD_RS18640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00220_B|PF01979|PTHR11647|PTHR11647:SF70|SSF51338|SSF51556|TIGR00857 METD_RS18645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|PTHR30309|PTHR30309:SF0|SM01207|TIGR00023 METD_RS18650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405|TIGR00732 METD_RS18655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|PTHR30383:SF5|SSF52266 METD_RS18665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF25|SSF52317 METD_RS18670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|PTHR33317|SM00732|SSF53098|TIGR00250 METD_RS18675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018958 SMI1/KNR4-like domain G3DSA:3.40.1580.10|PF09346|SM00860|SSF160631 METD_RS18685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|PTHR15004|PTHR15004:SF0|SSF141000|TIGR00135 METD_RS18690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR004412|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0016884 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|PTHR11895|PTHR11895:SF7|SSF75304|TIGR00132 METD_RS18705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF10|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS18710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13533|PTHR30158|PTHR30158:SF7|SSF111369|TIGR01730 METD_RS18720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS18725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PTHR11808|PTHR11808:SF12|SSF53383|TIGR01326 METD_RS18730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002283|IPR005123|IPR026992|IPR027443 Isopenicillin N synthase|Isopenicillin N synthase-like|Non-haem dioxygenase N-terminal domain|Oxoglutarate/iron-dependent dioxygenase GO:0005506|GO:0016491|GO:0055114 G3DSA:2.60.120.330|PF03171|PF14226|PR00682|PTHR10209|PTHR10209:SF146|SSF51197 METD_RS18740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009354 Usg-like PF06233 METD_RS18745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 METD_RS18750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129 METD_RS18755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006091|IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02770|PF02771|PF08028|PTHR10909|PTHR10909:SF334|SSF47203|SSF56645 METD_RS18765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|SSF53850 METD_RS18770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|PTHR19372|SSF56524|SSF81296|TIGR04555 METD_RS18775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 METD_RS18780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF11|SM00062|SSF53850|TIGR01728 METD_RS18785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251 Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30011|PTHR30011:SF21|SSF51679 METD_RS18790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006042|IPR006043|IPR017588 Uric acid permease UacT-like|Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0016021|GO:0055085 PF00860|PS01116|PTHR11119|PTHR11119:SF3|TIGR00801|TIGR03173 METD_RS18795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001853|IPR012336|IPR014440 DSBA-like thioredoxin domain|HCCA isomerase/glutathione S-transferase kappa|Thioredoxin-like fold GO:0015035 G3DSA:3.40.30.10|PF01323|PIRSF006386|PTHR13887|SSF52833 METD_RS18800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF10|SM00382|SSF52540 METD_RS18805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF12|SSF161098 METD_RS18810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF4|SSF160387|SSF53850 METD_RS18815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF30|SM00100|SM00419|SSF46785|SSF51206 METD_RS18820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004155|IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold|PBS lyase HEAT-like repeat GO:0005488 G3DSA:1.25.10.10|PF13646|PTHR12697|PTHR12697:SF18|SM00567|SSF48371 METD_RS18825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 METD_RS18830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003953|IPR015939|IPR023753|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|PF00890|PF02910|PIRSF000171|PR00368|PTHR11632|PTHR11632:SF6|SSF46977|SSF51905 METD_RS18835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010376 Domain of unknown function DUF971 PF06155|PTHR35303 METD_RS18845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PTHR33121|PTHR33121:SF13|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 METD_RS18850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 METD_RS18855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 G3DSA:3.10.50.30|PF01272|PTHR30437|PTHR30437:SF5|SSF54534 METD_RS18865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 G3DSA:3.10.50.30|PF01272|SSF54534 METD_RS18890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS18895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF438|SM00448|SSF52172 METD_RS18900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF13185|SSF55781 METD_RS18905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30293|SSF46785|SSF53850 METD_RS18915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 METD_RS18920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 METD_RS18925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 METD_RS18930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 G3DSA:3.50.30.50|PF04199|PTHR31118|SSF102198 METD_RS18935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR023631 Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|SSF75304 METD_RS18940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF32|SSF56317 METD_RS18945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966|PTHR37944 METD_RS18950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004039|IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain|Rubredoxin-type fold G3DSA:2.20.28.10|PF09723|SM00834|TIGR02605 METD_RS18955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|PF03069|PTHR31891|PTHR31891:SF1|SSF141130 METD_RS18960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR008220|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 G3DSA:3.40.50.1820|PF00561|PIRSF000443|PTHR10992|PTHR10992:SF903|SSF53474 METD_RS18965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017780|IPR027417 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtE|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF404|SM00382|SSF52540|TIGR03410 METD_RS18970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR017781|IPR027417|IPR032823 ABC transporter, urea, ATP-binding protein, UrtD|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF366|SSF52540|TIGR03411 METD_RS18975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR017778 ABC transporter, permease|ABC transporter, urea, permease protein, UrtC GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF4|TIGR03408 METD_RS18980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR017779 ABC transporter, permease|ABC transporter, urea permease protein UrtB, bacterial-type GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF349|TIGR03409 METD_RS18985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017777|IPR028082 ABC transporter, urea, substrate-binding, UrtA|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|PTHR30483|PTHR30483:SF8|SSF53822|TIGR03407 METD_RS18990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 METD_RS18995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF50|SM00421|SM00448|SSF46894|SSF52172 METD_RS19000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010642 Invasion protein B PF06776 METD_RS19005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000878|IPR012797|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236|GO:0043819 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PIRSF036525|PTHR10882|PTHR10882:SF1|SSF53790|TIGR02434 METD_RS19010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029045 ClpP/crotonase-like domain G3DSA:3.90.226.10|SSF52096 METD_RS19015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014 PAS domain G3DSA:3.30.450.20|SSF55785 METD_RS19020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF009320|PTHR13696|PTHR13696:SF66|SSF52540 METD_RS19030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain PF03330|PTHR34183|PTHR34183:SF1|SSF50685|TIGR00413 METD_RS19040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000361|IPR016092 FeS cluster biogenesis|FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PTHR10072|SSF89360|TIGR00049 METD_RS19045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003607|IPR006261|IPR006674|IPR023023|IPR026875 Deoxyguanosinetriphosphate triphosphohydrolase|Deoxyguanosinetriphosphate triphosphohydrolase, type 2|HD domain|HD/PDEase domain|Phosphohydrolase-associated domain GO:0000287|GO:0008832|GO:0046039 G3DSA:1.10.3210.10|MF_01212|PF01966|PF13286|PTHR11373|PTHR11373:SF25|SM00471|SSF109604|TIGR01353 METD_RS19055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|PTHR31793|PTHR31793:SF7|SSF54637 METD_RS19060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 METD_RS19065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 METD_RS19070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001764|IPR017853|IPR019800 Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal|Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 G3DSA:3.20.20.300|PF00933|PS00775|PTHR30480|PTHR30480:SF7|SSF51445 METD_RS19075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|TIGR01411 METD_RS19080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003369|IPR003998|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0043953 MF_00237|PF02416|PR01506|PTHR33162|PTHR33162:SF1|TIGR01410 METD_RS19085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002033|IPR019820 Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site GO:0016021 MF_00902|PF00902|PR01840|PS01218|PTHR30371|PTHR30371:SF0|TIGR00945 METD_RS19095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF4|SSF103473 METD_RS19100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005025|IPR019912|IPR029039 FMN reductase, MsuE-like|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30543|PTHR30543:SF8|SSF52218|TIGR03566 METD_RS19105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR010067 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF11|SM00062|SSF53850|TIGR01728 METD_RS19110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF22|SSF161098 METD_RS19115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR017875|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Aliphatic sulfonates import ATP-binding protein SsuB|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0005886|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF365|SM00382|SSF52540 METD_RS19120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251|IPR019911 Alkanesulphonate monooxygenase, FMN-dependent|Luciferase-like domain GO:0008726|GO:0016705|GO:0055114 G3DSA:3.20.20.30|MF_01229|PF00296|PTHR30011|PTHR30011:SF1|SSF51679|TIGR03565 METD_RS19125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR010067 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF11|SM00062|SSF53850|TIGR01728 METD_RS19130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR010067|IPR015168 Aliphatic sulfonates-binding protein|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0006790|GO:0006810|GO:0016020 G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF11|SM00062|SSF53850|TIGR01728 METD_RS19135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13454|PTHR40254|PTHR40254:SF1|SSF51905 METD_RS19145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019223 Domain of unknown function DUF2147 PF09917|PTHR36919|PTHR36919:SF2 METD_RS19150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011201|IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase|Zinc-ribbon domain, bacteria PF10005|PF15887|PIRSF012641 METD_RS19155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002931|IPR013589|IPR018667 Bacterial transglutaminase-like, N-terminal|Domain of unknown function DUF2126|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PF09899|PTHR33490|PTHR33490:SF1|SM00460|SSF54001 METD_RS19160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007296|IPR025841 Circularly permuted ATP-grasp type 2|Domain of unknown function DUF403 PF04168|PF14403|PTHR34595|PTHR34595:SF1|SSF56059 METD_RS19165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PTHR33490|PTHR33490:SF6|SM00460|SSF54001 METD_RS19170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PTHR30055|PTHR30055:SF34|SSF46689|SSF48498 METD_RS19175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SSF51735 METD_RS19180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23502|PTHR23502:SF19|SSF103473 METD_RS19195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001466|IPR012338|IPR021860 Beta-lactamase-related|Beta-lactamase/transpeptidase-like|Peptidase S12, Pab87-related, C-terminal G3DSA:3.40.710.10|PF00144|PF11954|PTHR22935|SSF56601 METD_RS19200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR029510 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde dehydrogenase, glutamic acid active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PS00687|PTHR11699|PTHR11699:SF97|SSF53720 METD_RS19205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR024478 4HB MCP domain|Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF158472|SSF58104 METD_RS19210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PR01179|PR01181|PS00879|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419 METD_RS19215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 METD_RS19220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 METD_RS19225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032808 DoxX family PF07681 METD_RS19230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01036|PTHR23501|PTHR23501:SF66|SSF103473 METD_RS19235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021747 Protein of unknown function DUF3313 PF11769 METD_RS19240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006679|IPR006680|IPR011059|IPR026912|IPR032466 Adenine deaminase|Adenine deaminase C-terminal domain|Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0000034|GO:0006146|GO:0016787|GO:0016810 G3DSA:2.30.40.10|MF_01518|PF01979|PF13382|PTHR11113|PTHR11113:SF2|SSF51338|SSF51556 METD_RS19245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|PTHR10920|PTHR10920:SF20|SSF53335 METD_RS19250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003695 Ppx/GppA phosphatase G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PTHR30005|SSF53067 METD_RS19255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13641|PTHR10859|PTHR10859:SF75|SSF53448 METD_RS19260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 PF01553|SM00563|SSF69593 METD_RS19265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014105|IPR023753 Carotenoid/retinoid oxidoreductase|FAD/NAD(P)-binding domain GO:0016117|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13450|PTHR10668|PTHR10668:SF75|SSF51905|TIGR02734 METD_RS19270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase G3DSA:3.40.50.880|PF00117|PTHR11922|PTHR11922:SF36|SSF52317 METD_RS19275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF12698|PTHR30294|PTHR30294:SF16 METD_RS19280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540 METD_RS19285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018673 Protein of unknown function DUF2141 PF09912 METD_RS19290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR008150|IPR014105|IPR023753 Amine oxidase|Carotenoid/retinoid oxidoreductase|FAD/NAD(P)-binding domain|Phytoene dehydrogenase, bacterial-type, conserved site GO:0016117|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PR00419|PS00982|PTHR10668|PTHR10668:SF4|SSF51905|TIGR02734 METD_RS19295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002789|IPR014588|IPR027417 ATPase, Atu1862 type, predicted|Helicase HerA, central domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01935|PIRSF034081|SSF52540 METD_RS19300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001537|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PTHR12029|PTHR12029:SF52|SSF55315|SSF75217 METD_RS19305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002539|IPR003965|IPR029069 Fatty acid synthase|HotDog domain|MaoC-like domain GO:0004312|GO:0005835|GO:0006633|GO:0055114 G3DSA:3.10.129.10|PF01575|PR01483|PTHR13078|SSF54637 METD_RS19310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|SSF161111 METD_RS19315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 METD_RS19325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017395|IPR029058 Alpha/Beta hydrolase fold|Chlorophyllase GO:0015996|GO:0047746 G3DSA:3.40.50.1820|PF12740|SSF53474 METD_RS19330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|PTHR11260|PTHR11260:SF256|SSF47616|SSF52833 METD_RS19340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR033195 Glycine/inosamine-phosphate amidinotransferase GO:0015067 G3DSA:3.75.10.10|PTHR10488|SSF55909 METD_RS19345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|TIGR00374|TIGR03476 METD_RS19350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494 METD_RS19355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017835|IPR025993|IPR029044 Ceramide glucosyltransferase|Hopanoid biosynthesis associated glycosyltransferase, HpnI|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF13506|PTHR12726|SSF53448|TIGR03472 METD_RS19360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006638|IPR007197|IPR017834|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Hopanoid biosynthesis associated radical SAM protein HpnJ|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|TIGR03471 METD_RS19365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002509|IPR006879|IPR011330|IPR017836 Chitooligosaccharide deacetylase ChbG-like|Glycoside hydrolase/deacetylase, beta/alpha-barrel|Hopanoid biosynthesis associated protein HpnK|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04794|PTHR31609|SSF88713|TIGR03473 METD_RS19375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004869|IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN|Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|SSF82866|TIGR03480 METD_RS19380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007197|IPR013785|IPR017833|IPR022563 Aldolase-type TIM barrel|Domain of unknown function DUF3463|Hopanoid biosynthesis associated radical SAM protein HpnH|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF11946|PF13353|PTHR11228|PTHR11228:SF22|SSF102114|TIGR03470 METD_RS19385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000845|IPR017831 Hopanoid-associated phosphorylase HpnG|Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167|TIGR03468 METD_RS19390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PTHR33619|PTHR33619:SF3 METD_RS19395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006001|IPR027417 Carbohydrate kinase, thermoresistant glucokinase|P-loop containing nucleoside triphosphate hydrolase GO:0005975|GO:0016301 G3DSA:3.40.50.300|PF13671|PTHR11603|SSF52540|TIGR01313 METD_RS19400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000150|IPR006379|IPR023214 Cof protein|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB GO:0016787 G3DSA:3.30.1240.10|G3DSA:3.40.50.1000|PF08282|PS01228|PTHR10000|PTHR10000:SF8|SSF56784|TIGR00099|TIGR01484 METD_RS19405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|PTHR21666:SF181|SSF53955 METD_RS19410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|PTHR35534|SSF57829|TIGR01031 METD_RS19420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007897|IPR010134|IPR012909 PHA accumulation regulator DNA-binding, N-terminal|PHB accumulation regulatory|Polyhydroxyalkanoate synthesis repressor PhaR PF05233|PF07879|TIGR01848 METD_RS19425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002155|IPR016039|IPR020610|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, active site|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00099|PS00737|PTHR18919|PTHR18919:SF95|SSF53901|TIGR01930 METD_RS19430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR011283|IPR016040|IPR020904 Acetoacetyl-CoA reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0005737|GO:0016491|GO:0018454|GO:0042619|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF559|SM00822|SSF51735|TIGR01829 METD_RS19435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PF03279|PTHR30606|PTHR30606:SF2 METD_RS19440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 PF02073|PR00919|PTHR34448|PTHR34448:SF3|SSF144052 METD_RS19445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014543 Uncharacterised conserved protein UCP028291 PF09981|PIRSF028291 METD_RS19450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF76|SSF55103|SSF56176 METD_RS19455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF7|SSF56529 METD_RS19460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR22769|SSF55811 METD_RS19470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF9|SSF53383 METD_RS19475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|SM00857|SSF53041 METD_RS19480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|PTHR38431|SSF46785|SSF53850 METD_RS19485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF28|SM00419|SSF46785|SSF51206 METD_RS19500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016090 Phospholipase A2 domain G3DSA:1.20.90.10|SSF48619 METD_RS19505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:2.40.110.10|PF02771|SSF47203|SSF56645 METD_RS19510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|PTHR35368|PTHR35368:SF1|SSF82784 METD_RS19515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF7|SSF161098 METD_RS19520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF16|SSF53850 METD_RS19525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS19530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 PF04966|PTHR37944 METD_RS19535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|PTHR30011|PTHR30011:SF16|SSF51679|TIGR03860 METD_RS19540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 METD_RS19545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF398 METD_RS19550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF5 METD_RS19555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 METD_RS19560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 METD_RS19565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF08028|PTHR10909|PTHR10909:SF334|SSF47203|SSF56645 METD_RS19575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF122|SSF49764 METD_RS19580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR014710|IPR018490 Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:2.60.120.10|SSF46785|SSF51206 METD_RS19585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS19590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019291 Host attachment protein PF10116 METD_RS19595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055 BON domain PF04972|PTHR34606|PTHR34606:SF2 METD_RS19605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS19610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS19615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF613|SM00421|SM00448|SSF46894|SSF52172 METD_RS19620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF505|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS19625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS19630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF13487|PTHR26402|SM00448|SM00471|SSF109604|SSF52172 METD_RS19635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR008207|IPR011006|IPR033417 CheY-like superfamily|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Periplasmic sensor domain CHASE8|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF01627|PF02518|PF17152|PR00344|PTHR24423|PTHR24423:SF382|SM00073|SM00304|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55874 METD_RS19640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal PF13400 METD_RS19645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012495 TadE-like PF07811 METD_RS19650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012495 TadE-like PF07811 METD_RS19675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|PTHR12302|PTHR12302:SF0|SM00318|SSF50199 METD_RS19690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028992 Hedgehog/Intein (Hint) domain G3DSA:2.170.16.10|PF13403|SSF51294 METD_RS19695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001126|IPR017961|IPR025188 DNA polymerase, Y-family, little finger domain|Domain of unknown function DUF4113|UmuC domain GO:0003684|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|PF00817|PF11799|PF13438|PTHR11076|PTHR11076:SF40|SSF56672 METD_RS19700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006197|IPR015927|IPR019759|IPR028360 Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677|GO:0006355 G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|PTHR33516:SF1|SSF51306 METD_RS19730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR10245|PTHR10245:SF38|SM00530|SSF47413 METD_RS19735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR011049|IPR013858|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Peptidase M10 serralysin, C-terminal|Serralysin-like metalloprotease, C-terminal GO:0005509|GO:0005615 G3DSA:2.150.10.10|PF00353|PF08548|PR00313|PS00330|SSF51120 METD_RS19740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR011991 Homeodomain-like|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF13384|SSF46689 METD_RS19745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS19755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS19760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS19765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS19770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002622|IPR009057|IPR011991 Homeodomain-like|Transposase, Synechocystis PCC 6803|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF01710|SSF46689 METD_RS19775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS19785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR013655 PAS domain|PAS fold-3 GO:0005515 G3DSA:3.30.450.20|PF08447|SSF55785|TIGR00229 METD_RS19810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR013423 Conserved hypothetical protein CHP02594|Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090|TIGR02594 METD_RS19835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS19855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SSF47413 METD_RS19870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012263|IPR012327|IPR029063 Adenine modification methylase, M.EcoRV-type|D12 class N6 adenine-specific DNA methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0009007|GO:0032775 G3DSA:3.40.50.150|PF02086|PIRSF000398|PR00505|PTHR30481|PTHR30481:SF4|SSF53335 METD_RS19875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007421 Schlafen, AAA domain GO:0005524 PF04326 METD_RS19880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002052|IPR003356|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PR00507|PS00092|SSF53335 METD_RS19890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF140990 METD_RS19895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR24559|SSF46689|SSF53098 METD_RS19900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010406 Protein of unknown function DUF1003 PF06210|PTHR41386|PTHR41386:SF1 METD_RS19910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584 Integrase, catalytic core GO:0015074 PF13683 METD_RS19930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR32552|PTHR32552:SF26|SSF53098 METD_RS19935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS19940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018968 Phasin PF09361 METD_RS19970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS19975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF605|SM00829|SSF50129|SSF51735 METD_RS19980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040|IPR028939 NAD(P)-binding domain|Pyrroline-5-carboxylate reductase, catalytic, N-terminal G3DSA:3.40.50.720|PF03807|PTHR14239|PTHR14239:SF11|SSF51735 METD_RS19985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|PTHR33204|PTHR33204:SF8|SSF46785 METD_RS19990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF11|SSF56317 METD_RS19995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|PTHR30483|PTHR30483:SF8|SSF53822 METD_RS20000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795 METD_RS20005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, permease|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PS00211|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 METD_RS20010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF568|SM00382|SSF52540 METD_RS20015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002019|IPR002026|IPR008223 Urease, beta subunit|Urease, gamma-beta subunit|Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 G3DSA:2.10.150.10|G3DSA:3.30.280.10|MF_01954|PD002319|PF00547|PF00699|PIRSF001225|PTHR33569|PTHR33569:SF1|SSF51278|SSF54111|TIGR00192|TIGR00193 METD_RS20020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS01120|PTHR22642|PTHR22642:SF7|SSF51338|SSF51556|TIGR01792 METD_RS20025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|PTHR31715|SSF52540|TIGR00101 METD_RS20030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774|PTHR33643|PTHR33643:SF1 METD_RS20035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|PF02814|PF05194|PIRSF036402|SSF69287 METD_RS20040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467|PTHR33620 METD_RS20045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005561|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Winged helix-turn-helix DNA-binding domain GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF03861|SSF52172 METD_RS20050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|PTHR30483|PTHR30483:SF8|SSF53822 METD_RS20055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|SSF53850 METD_RS20060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2 METD_RS20065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|PTHR30050:SF6|SM00382|SSF52540 METD_RS20080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000845|IPR018017 Nucleoside phosphorylase|Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|PTHR21234|PTHR21234:SF16|SSF53167 METD_RS20095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.10.150.20|G3DSA:3.30.70.270|PTHR11076|PTHR11076:SF40|SSF56672 METD_RS20180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|SSF55073 METD_RS20185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032033 Cytochrome P460 PF16694 METD_RS20190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00412|PTHR10992|PTHR10992:SF764|SSF53474 METD_RS20195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR19211|PTHR19211:SF6|SM00382|SSF52540 METD_RS20200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF559|SM00304|SM00387|SM00388|SSF47384|SSF55874 METD_RS20205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF528|SM00448|SM00862|SSF46894|SSF52172 METD_RS20215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF859|SSF53474 METD_RS20220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF366|SM00822|SSF51735 METD_RS20235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR14194|PTHR14194:SF69|SSF51735 METD_RS20245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR23200|PTHR23200:SF33|SM00849|SSF56281 METD_RS20250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF13460|PTHR14194|PTHR14194:SF69|SSF51735 METD_RS20270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|PTHR33164:SF16|SM00347|SSF46785 METD_RS20275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632|PTHR30509|PTHR30509:SF1 METD_RS20280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012451 Protein of unknown function DUF1656 PF07869 METD_RS20285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|PTHR30367|PTHR30367:SF5|SSF111369|TIGR01730 METD_RS20290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PTHR10374|PTHR10374:SF14|SSF54593 METD_RS20295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF89|SSF53187|SSF55031|TIGR01891 METD_RS20300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005115 Uncharacterised domain UPF0126 PF03458|PTHR30506|PTHR30506:SF3 METD_RS20305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS20310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001437|IPR018151|IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 G3DSA:3.10.50.30|PF01272|PF14760|PS00830|PTHR30437|PTHR30437:SF5|SSF54534 METD_RS20315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|PTHR31964|SSF52402 METD_RS20330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 G3DSA:3.10.50.30|PF01272|PTHR30437|PTHR30437:SF5|SSF54534 METD_RS20335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005097|IPR016040|IPR023181|IPR032095 Homospermidine synthase-like, domain|NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.30.360.30|G3DSA:3.40.50.720|PF03435|PF16653 METD_RS20340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR017830|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain|Squalene-associated FAD-dependent desaturase GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF274|SSF51905|TIGR03467 METD_RS20345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006271|IPR015421|IPR015424|IPR022278 Phosphoserine aminotransferase|Phosphoserine aminotransferase, Methanosarcina-type|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|PIRSF000525|PTHR21152|PTHR21152:SF23|SSF53383|TIGR01365 METD_RS20350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006095|IPR006096|IPR006097|IPR014362|IPR016040 Glutamate dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase|Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal|Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain|NAD(P)-binding domain GO:0006520|GO:0016491|GO:0016639|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|PF00208|PF02812|PIRSF000185|PR00082|PTHR11606|PTHR11606:SF16|SM00839|SSF51735|SSF53223 METD_RS20360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|PTHR32125|PTHR32125:SF5|SSF69765|TIGR00151 METD_RS20370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR007065 CBS domain|HPP G3DSA:3.10.580.10|PF00571|PF04982|PTHR33741|SM00116|SSF54631 METD_RS20375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR011821|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-succinylhomoserine (thiol)-lyase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF15|SSF53383|TIGR02080 METD_RS20380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF4|SSF46785|TIGR00738 METD_RS20385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000971|IPR001221|IPR001433|IPR001709|IPR008333|IPR009050|IPR012292|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Globin|Globin-like|Globin/Protoglobin|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0019825|GO:0020037|GO:0055114 G3DSA:1.10.490.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00042|PF00175|PF00970|PR00371|PR00410|PTHR22924|SSF46458|SSF52343|SSF63380 METD_RS20390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR013656 PAC motif|PAS domain|PAS fold-4 G3DSA:3.30.450.20|PF08448|PTHR24423|SM00086|SM00091|SSF55785|TIGR00229 METD_RS20395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 METD_RS20400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS20405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002560|IPR029261 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF01610|PF14690|PTHR33498|PTHR33498:SF1 METD_RS20415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS20420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018753 Azospirillum phage Cd, Gp10 PF10073 METD_RS20430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR33751|PTHR33751:SF3|SSF46626 METD_RS20435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PTHR10422|PTHR10422:SF17|SSF81442 METD_RS20440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001505|IPR002429|IPR008972 Copper centre Cu(A)|Cupredoxin|Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 G3DSA:2.60.40.420|PF00116|PS00078|PTHR22888|PTHR22888:SF12|SSF49503 METD_RS20445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR014353 Cytochrome c-like domain|Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0009055|GO:0016020|GO:0016614|GO:0020037 G3DSA:1.10.760.10|PF00034|PIRSF000018|PTHR35008|PTHR35008:SF5|SSF46626 METD_RS20450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000005|PTHR33751|PTHR33751:SF2|SSF46626 METD_RS20455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF32|SM00100|SM00419|SSF46785|SSF51206 METD_RS20475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33609|SSF46689 METD_RS20480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR025948 HTH-like domain|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13276|PF13683|PTHR32552|PTHR32552:SF26|SSF53098 METD_RS20490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001902|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 PF00916|PTHR11814|PTHR11814:SF112 METD_RS20495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF104|SSF52768 METD_RS20500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:2.40.50.100|PF13533|PTHR30158|PTHR30158:SF3|SSF111369 METD_RS20505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF42|SSF49764 METD_RS20510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF28|SSF46785|SSF51206 METD_RS20515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS20525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 METD_RS20530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005530 SPW repeat PF03779 METD_RS20535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR011053 Biotin/lipoyl attachment|Single hybrid motif G3DSA:2.40.50.100|PF00364|SSF51230 METD_RS20540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 METD_RS20555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 PF01566|PTHR11706|PTHR11706:SF43 METD_RS20560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 METD_RS20565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF2|SM00749 METD_RS20570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS20580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS20585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR37823|SSF46626 METD_RS20590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS20595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR002328|IPR011032|IPR013154|IPR014187|IPR016040 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-binding type 2|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF08240|PS00059|PTHR11695|PTHR11695:SF403|SSF50129|SSF51735|TIGR02822 METD_RS20600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF2|SM00749 METD_RS20610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 METD_RS20615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PR00471|PS01076|PTHR21060|PTHR21060:SF11|SSF53067 METD_RS20620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001226|IPR029039 Flavodoxin, conserved site|Flavoprotein-like domain GO:0009055|GO:0010181 G3DSA:3.40.50.360|PS00201|SSF52218 METD_RS20625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000425|IPR022357|IPR023271 Aquaporin-like|Major intrinsic protein|Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF00230|PR00783|PS00221|PTHR19139|PTHR19139:SF103|SSF81338|TIGR00861 METD_RS20635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF2|SM00749 METD_RS20640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009945 Protein of unknown function DUF1476 PF07345|PIRSF031780 METD_RS20645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.50.10750|SSF53659 METD_RS20660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 METD_RS20665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS20670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS20680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018968 Phasin PF09361 METD_RS20685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF613|SM00448|SSF52172 METD_RS20690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF613|SM00421|SM00448|SSF46894|SSF52172 METD_RS20695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF505|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS20700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 METD_RS20710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PTHR37823|SSF46626 METD_RS20715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|SSF52402 METD_RS20720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PR00120|PS00154|PTHR24093|PTHR24093:SF50|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 METD_RS20745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 METD_RS20765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 METD_RS20770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|PTHR13604|PTHR13604:SF1|SSF143081 METD_RS20775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 METD_RS20780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 METD_RS20795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008972 Cupredoxin SSF49503 METD_RS20830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR001367|IPR011991|IPR022687|IPR022689 DTXR-type HTH domain|Iron dependent repressor|Iron dependent repressor, metal binding and dimerisation domain|MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006355|GO:0046914|GO:0046983 G3DSA:1.10.10.10|G3DSA:1.10.60.10|PF01325|PF02742|PTHR33238|PTHR33238:SF1|SM00347|SM00529|SSF46785 METD_RS20835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 MF_00221|PF01566|PR00447|PTHR11706|TIGR01197 METD_RS20840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30419|PTHR30419:SF2|SSF46785|SSF53850 METD_RS20845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PTHR10283 METD_RS20850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000701|IPR014314|IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site|Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0009055|GO:0016020|GO:0016627|GO:0045281 G3DSA:1.20.1300.10|PF01127|PIRSF000178|PS01001|PTHR10978|PTHR10978:SF6|SSF81343|TIGR02970 METD_RS20855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000701|IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016021|GO:0016627|GO:0020037 G3DSA:1.20.1300.10|PF01127|SSF81343|TIGR02968 METD_RS20860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003952|IPR003953|IPR011281|IPR014006|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PS00504|PTHR11632|PTHR11632:SF51|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816 METD_RS20870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR004489|IPR006058|IPR009051|IPR012675|IPR017900|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00197|PS00198|PTHR11921|PTHR11921:SF27|SSF46548|SSF54292|TIGR00384 METD_RS20875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016085|IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19|Protease inhibitor, beta-barrel domain GO:0004866 PF02974|SSF50882 METD_RS20880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR018759 Putative beta-barrel porin 2|TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 G3DSA:2.40.170.20|PF10082|SSF56935 METD_RS20885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PTHR38418|SM00116|SSF53697|TIGR00393 METD_RS20895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657|PTHR34821 METD_RS20900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF17|SSF52096 METD_RS20905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PTHR24322|PTHR24322:SF211|SSF51735 METD_RS20910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|PTHR24322:SF554|SSF51735 METD_RS20915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|PF01544|PTHR21535|PTHR21535:SF37|SSF143865|SSF144083 METD_RS20920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|PTHR30565|PTHR30565:SF2|SSF47240 METD_RS20925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF158472|SSF58104 METD_RS20945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004370|IPR014347 4-oxalocrotonate tautomerase|Tautomerase/MIF superfamily GO:0006725|GO:0016853 G3DSA:3.30.429.10|PF01361|PTHR35530|PTHR35530:SF1|SSF55331 METD_RS20950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 METD_RS20955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001789|IPR003018|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01590|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00065|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 METD_RS20960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF38|SSF46689 METD_RS20965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|SSF47240 METD_RS20970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003265|IPR003651|IPR011257|IPR023170 DNA glycosylase|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003824|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|PF00730|PTHR10359|PTHR10359:SF18|SM00478|SM00525|SSF48150 METD_RS20975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24320|PTHR24320:SF45|SSF51735 METD_RS20980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000782 FAS1 domain G3DSA:2.30.180.10|PF02469|PTHR10900|SM00554|SSF82153 METD_RS20985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF859|SSF53474 METD_RS20990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006913|IPR011057 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V|Mss4-like GO:0008152|GO:0016846 G3DSA:3.90.1590.10|PF04828|PTHR33337|SSF51316 METD_RS20995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF13185|SM00065|SSF55781 METD_RS21010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025528 BrnA antitoxin of type II toxin-antitoxin system PF14384 METD_RS21015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098|TIGR02141 METD_RS21020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352 METD_RS21025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|PTHR11260:SF282|SSF47616|SSF52833 METD_RS21030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR011868|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0015098|GO:0015689|GO:0016020|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|PTHR24220|PTHR24220:SF284|SM00382|SSF50331|SSF52540|TIGR02142 METD_RS21035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF81301 METD_RS21040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|PTHR30004|PTHR30004:SF6|SSF53659|TIGR00557 METD_RS21045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|PTHR11727|SM00650|SSF53335|TIGR00755 METD_RS21050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:2.40.50.100|PF16576|SSF111369 METD_RS21060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 METD_RS21065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF76|SSF52091 METD_RS21070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007300 CidB/LrgB family PF04172|PTHR30249|PTHR30249:SF5 METD_RS21075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005538 LrgA/CidA family GO:0016021 PF03788|PTHR33931 METD_RS21080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|TerB-like G3DSA:1.10.3680.10|PF05099|SSF158682 METD_RS21085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 METD_RS21090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453|PTHR30189 METD_RS21095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|PTHR33529:SF1|TIGR04408 METD_RS21100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|PTHR33529:SF2|TIGR04407 METD_RS21105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|PTHR11963|PTHR11963:SF13|SSF52949|SSF53187 METD_RS21115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801 METD_RS21125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006685|IPR010920 LSM domain|Mechanosensitive ion channel MscS GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|PTHR30566|PTHR30566:SF10|SSF50182 METD_RS21130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|PTHR13887|PTHR13887:SF25|SSF52833 METD_RS21135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003607|IPR006674|IPR006675 HD domain|HD/PDEase domain|HDIG domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604|TIGR00277 METD_RS21140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 METD_RS21145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF401|SSF53383 METD_RS21150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007354 Carotene biosynthesis associated membrane protein PF04240|PTHR39419 METD_RS21155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004659|IPR012340|IPR019307|IPR028878 Nucleic acid-binding, OB-fold|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E|Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396|GO:0008995 G3DSA:2.40.50.140|MF_00970|PF10150|PTHR30001|PTHR30001:SF1|SSF50249|TIGR00757 METD_RS21165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002508|IPR021731 AMIN domain|Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 G3DSA:3.40.630.40|PF01520|PF11741|PTHR30404|PTHR30404:SF0|SM00646|SSF53187 METD_RS21170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR001460|IPR012338|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 METD_RS21175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251|IPR024014 Dimethyl sulphone monooxygenase SfnG|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30011|PTHR30011:SF21|SSF51679|TIGR04021 METD_RS21180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009075|IPR009100|IPR013107|IPR013786|IPR023922 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Sulphate-starvation-induced SfnB GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|PF08028|PIRSF016578|PTHR10909|PTHR10909:SF300|SSF47203|SSF56645|TIGR04022 METD_RS21185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 METD_RS21190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002346|IPR005107|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|Molybdopterin dehydrogenase, FAD-binding GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.390.50|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF00941|PF03450|PTHR11908|PTHR11908:SF97|SM01092|SSF55447|SSF56176 METD_RS21195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF71|SM01008|SSF54665|SSF56003 METD_RS21205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006043|IPR026033|IPR029940 AzgA purine transporter|Purine permease PbuG-like|Xanthine/uracil/vitamin C permease GO:0005215|GO:0005345|GO:0006810|GO:0006863|GO:0016020|GO:0055085 PF00860|PIRSF005353|PTHR11119|PTHR11119:SF9 METD_RS21215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011251|IPR019949 Luciferase family oxidoreductase, group 1|Luciferase-like domain GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PTHR30137|PTHR30137:SF2|SSF51679|TIGR03558 METD_RS21235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF64182 METD_RS21240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007444|IPR011013|IPR013783|IPR014438|IPR014718|IPR014756 Galactose mutarotase-like domain|Glucan biosynthesis, periplasmic, MdoG C-terminal|Glucan biosynthesis, periplasmic, MdoG/D|Glycoside hydrolase-type carbohydrate-binding, subgroup|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0005975|GO:0016051|GO:0030246|GO:0042597 G3DSA:2.60.40.10|G3DSA:2.70.98.10|PF04349|PIRSF006281|PTHR30504|SSF74650|SSF81296 METD_RS21245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF13632|PTHR10587|PTHR10587:SF63|SSF53448 METD_RS21255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022037 Protein of unknown function DUF3606 PF12244 METD_RS21280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000120|IPR014085|IPR023631 Allophanate hydrolase|Amidase|Amidase signature domain GO:0016884 G3DSA:3.90.1300.10|PF01425|PTHR11895|PTHR11895:SF24|SSF75304|TIGR02713 METD_RS21285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000089|IPR003778|IPR003833|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013815|IPR013816|IPR014084|IPR016185|IPR024946|IPR029000 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Arginine repressor C-terminal-like domain|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carboxyltransferase domain, subdomain A and B|Carboxyltransferase domain, subdomain C and D|Cyclophilin-like domain|Pre-ATP-grasp domain|Rudiment single hybrid motif|Single hybrid motif|Urea carboxylase GO:0003824|GO:0005524 G3DSA:2.40.100.10|G3DSA:2.40.50.100|G3DSA:3.30.1360.40|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF02626|PF02682|PF02785|PF02786|PS00866|PS00867|PTHR18866|PTHR18866:SF91|SM00796|SM00797|SM00878|SSF160467|SSF50891|SSF51230|SSF51246|SSF52440|SSF56059|TIGR00724|TIGR02712 METD_RS21290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017791|IPR018959 Domain of unknown function DUF1989|Urea carboxylase-associated protein 1 PF09347|PTHR31527|PTHR31527:SF0|TIGR03424 METD_RS21295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017792|IPR018959 Domain of unknown function DUF1989|Urea carboxylase-associated protein 2 PF09347|PTHR31527|PTHR31527:SF0|TIGR03425 METD_RS21300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR40943|SSF51182 METD_RS21305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008146|IPR008147|IPR014746|IPR017536|IPR027303 Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase, type III|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006542|GO:0006807 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PS00181|PTHR20852|PTHR20852:SF7|SM01230|SSF54368|SSF55931|TIGR03105 METD_RS21310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003785|IPR024087 Creatininase-like domain|Creatininase/formamide hydrolase G3DSA:3.40.50.10310|PF02633|PTHR35005|PTHR35005:SF1|SSF102215 METD_RS21315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 METD_RS21320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 METD_RS21325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|PTHR30024:SF8|SSF53850 METD_RS21330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000644|IPR003439|IPR003593|IPR005892|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|CBS domain|Glycine betaine transport ATP-binding subunit|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016020|GO:0016887|GO:0031460 G3DSA:3.10.580.10|G3DSA:3.40.50.300|PF00005|PF00571|PS00211|PTHR24220|PTHR24220:SF374|SM00382|SSF52540|SSF54631|TIGR01186 METD_RS21335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30177|PTHR30177:SF2|SSF161098 METD_RS21340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 G3DSA:3.40.190.10|G3DSA:3.40.190.100|PF04069|PTHR30177|PTHR30177:SF0|SSF53850 METD_RS21345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 METD_RS21350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR009057|IPR018060|IPR018062|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.880|PF01965|PF12833|PS00041|PTHR11019|PTHR11019:SF90|SM00342|SSF46689|SSF52317 METD_RS21355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006076|IPR006278|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain|Sarcosine oxidase subunit beta GO:0008115|GO:0016491|GO:0046653|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF44|SSF51905|SSF54373|TIGR01373 METD_RS21360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 PF04267|TIGR01374 METD_RS21365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006222|IPR006277|IPR013977|IPR023753|IPR027266|IPR029043 FAD/NAD(P)-binding domain|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Sarcosine oxidase, alpha subunit GO:0005515|GO:0008115|GO:0016491|GO:0046653|GO:0055114 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|G3DSA:3.50.50.60|PF01571|PF07992|PF08669|PF13510|PIRSF037980|PR00368|PR00411|PTHR13847|PTHR13847:SF189|SSF101790|SSF103025|SSF51905|TIGR01372 METD_RS21370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007375 Sarcosine oxidase, gamma subunit PF04268|SSF103025 METD_RS21375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF1|SSF143548|TIGR00720 METD_RS21380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009506 Protein of unknown function DUF1127 PF06568 METD_RS21385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PTHR31423|SSF55826 METD_RS21390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014729|IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF01012|SSF52402 METD_RS21395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014729|IPR014730|IPR014731|IPR029035 DHS-like NAD/FAD-binding domain|Electron transfer flavoprotein, alpha subunit, C-terminal|Electron transfer flavoprotein, alpha/beta-subunit, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.1220|G3DSA:3.40.50.620|PF00766|PF01012|SM00893|SSF52402|SSF52467 METD_RS21400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004017|IPR009051|IPR017896|IPR017900|IPR021872 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain|Protein of unknown function DUF3483 GO:0051536 G3DSA:1.10.1060.10|PF02754|PF11982|PF13183|PS00198|PTHR11921|PTHR11921:SF22|SSF46548 METD_RS21405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001155|IPR013785|IPR023753 Aldolase-type TIM barrel|FAD/NAD(P)-binding domain|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF00724|PF07992|PR00368|PR00411|PTHR22893|PTHR22893:SF25|SSF51395|SSF51905 METD_RS21410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR001433|IPR001709|IPR001834|IPR006058|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|NADH:cytochrome b5 reductase (CBR)|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00406|PS00197|PTHR19370|PTHR19370:SF89|SSF52343|SSF54292|SSF63380 METD_RS21415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001663|IPR015879|IPR017941 Aromatic-ring-hydroxylating dioxygenase, alpha subunit|Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain|Rieske [2Fe-2S] iron-sulphur domain GO:0005506|GO:0006725|GO:0016491|GO:0016708|GO:0019439|GO:0051537|GO:0055114 G3DSA:2.102.10.10|G3DSA:3.90.380.10|PF00355|PF00848|PR00090|PTHR21266|PTHR21266:SF2|SSF50022|SSF55961 METD_RS21420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000760|IPR011809|IPR020583 Histidinol-phosphate phosphatase, putative, inositol monophosphatase|Inositol monophosphatase|Inositol monophosphatase, metal-binding site GO:0004401|GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PS00629|PTHR20854|PTHR20854:SF38|SSF56655|TIGR02067 METD_RS21425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|PTHR22603|SSF56112 METD_RS21430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 METD_RS21435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002933|IPR010158|IPR011650 Amidase, hydantoinase/carbamoylase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787|GO:0016813 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PIRSF001235|PTHR32494|SSF53187|SSF55031|TIGR01879 METD_RS21440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF336|SM00382|SSF52540|TIGR01727 METD_RS21445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF2|SSF161098 METD_RS21450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF0|SSF161098 METD_RS21455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|SSF53850 METD_RS21460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR011662|IPR012910|IPR030149 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor|TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0006810|GO:0009279|GO:0015891|GO:0016020|GO:0016021|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF14|SM00965|SSF56935|TIGR01783 METD_RS21465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266|PTHR30273|PTHR30273:SF2 METD_RS21470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF30|SSF88659|SSF88946|TIGR02937 METD_RS21475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007310|IPR022770 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal|Ferric iron reductase FhuF domain GO:0015343|GO:0019290 PF04183|PF06276|PTHR34384|PTHR34384:SF4 METD_RS21480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR007310|IPR020845|IPR022770|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal|Ferric iron reductase FhuF domain GO:0003824|GO:0008152|GO:0015343|GO:0019290 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF04183|PF06276|PF13193|PS00455|PTHR34384|PTHR34384:SF5|SSF56801 METD_RS21485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 METD_RS21490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013022 Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PTHR12110|PTHR12110:SF27|SSF51658 METD_RS21495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014543 Uncharacterised conserved protein UCP028291 PF09981|PIRSF028291 METD_RS21500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|PTHR23091:SF262|SSF55729 METD_RS21505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012347|IPR025419 Domain of unknown function DUF4142|Ferritin-related G3DSA:1.20.1260.10|PF13628 METD_RS21510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR015893 Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|SSF46689 METD_RS21515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PTHR11645|PTHR11645:SF0|SSF48179|SSF51735|TIGR00112 METD_RS21520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019660 Putative sensory transduction regulator YbjN PF10722 METD_RS21525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007475 Membrane fusogenic activity G3DSA:1.20.5.490|PF04380 METD_RS21530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF528|SM00448|SM00862|SSF46894|SSF52172 METD_RS21535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF533|SM00304|SM00387|SM00388|SSF47384|SSF55874 METD_RS21540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS21545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR010987|IPR012336 Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF13410|PF13417|PTHR11260|PTHR11260:SF144|SSF47616|SSF52833 METD_RS21550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 METD_RS21555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PTHR21109|PTHR21109:SF3|TIGR00030 METD_RS21560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|SM00448|SSF52172 METD_RS21565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026869|IPR029055 Nucleophile aminohydrolases, N-terminal|Putative glutamine amidotransferase type 2 G3DSA:3.60.20.10|PF13230|PTHR11907|PTHR11907:SF1|SSF56235 METD_RS21570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF0 METD_RS21575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002539|IPR016790|IPR029069 HotDog domain|MaoC-like domain|Thiol ester hydratase, Rv0216, predicted G3DSA:3.10.129.10|PF01575|PIRSF021494|PTHR13078|PTHR13078:SF18|SSF54637 METD_RS21580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325|PTHR33219|PTHR33219:SF5 METD_RS21590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS21595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023200 Ribosome modulation factor-like domain G3DSA:1.10.10.620 METD_RS21600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PD968187 METD_RS21605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS21610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:3.40.50.1390|PF00239|PTHR30461|SM00857|SSF53041 METD_RS21630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24322|SM00822|SSF51735 METD_RS21640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|PTHR33164:SF1|SM00347|SSF46785 METD_RS21655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PTHR30328|PTHR30328:SF18|SSF46689|SSF48498 METD_RS21660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF18|SSF82693|SSF82714|SSF82866 METD_RS21665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF14|SSF111369|TIGR01730 METD_RS21670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PS00197|SSF54292 METD_RS21675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF28|SSF46785|SSF53850 METD_RS21680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF136|SSF51430 METD_RS21685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR003018|IPR029016|IPR029787 GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAS domain GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00990|PF01590|PTHR33121|PTHR33121:SF7|SM00065|SM00267|SSF55073|SSF55781|SSF55785|TIGR00254 METD_RS21690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001633|IPR003018|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF01590|PTHR33121|PTHR33121:SF13|SM00052|SM00065|SSF141868|SSF55073|SSF55781 METD_RS21700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR011991|IPR024370 PBP domain|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF12727|PTHR38431|SSF46785|SSF53850 METD_RS21710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011852 TRAP transporter solute receptor, TAXI family G3DSA:3.40.190.10|PF16868|PTHR30024|PTHR30024:SF5|SSF53850 METD_RS21725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR011991 Homeodomain-like|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF13384|SSF46689 METD_RS21730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358|PTHR23022 METD_RS21735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716 METD_RS21740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000792|IPR001610|IPR011991|IPR013656|IPR016032 PAC motif|PAS domain|PAS fold-4|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|PF00196|PF08448|PF13426|PR00038|PTHR26402|PTHR26402:SF151|SM00086|SM00091|SM00421|SSF46894|SSF55785|TIGR00229 METD_RS21750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226|PTHR33884 METD_RS21760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019060 Domain of unknown function DUF2382 PF09557 METD_RS21765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019060 Domain of unknown function DUF2382 PF09557 METD_RS21770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010985 Ribbon-helix-helix GO:0006355 SSF47598 METD_RS21775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010126|IPR029058 Alpha/Beta hydrolase fold|Esterase, PHB depolymerase GO:0005576 G3DSA:3.40.50.1820|PF10503|PTHR10655|SSF53474|TIGR01840 METD_RS21780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003199|IPR029055|IPR029132 Choloylglycine hydrolase/NAAA C-terminal|Choloylglycine hydrolase/Peptidase C59 family|Nucleophile aminohydrolases, N-terminal GO:0016811 G3DSA:3.60.60.10|PF02275|PTHR35527|PTHR35527:SF2|SSF56235 METD_RS21785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|SSF53474 METD_RS21790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 METD_RS21800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010699 Protein of unknown function DUF1275 PF06912|PTHR37314|PTHR37314:SF1 METD_RS21805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR003018|IPR010982|IPR029016 Cro/C1-type helix-turn-helix domain|GAF domain|GAF domain-like|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0005515|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.30.450.40|PF01381|PF01590|PTHR33121|PTHR33121:SF12|SM00065|SM00530|SSF47413|SSF55781 METD_RS21810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655|IPR013656 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PF08448|PR00260|PTHR24422|PTHR24422:SF12|SM00086|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 METD_RS21815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF00595|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 METD_RS21820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010486|IPR024972 HNS-dependent expression A|HNS-dependent expression A/B GO:0030288|GO:0071468 G3DSA:1.10.890.10|MF_00946|PD065392|PF06411|SSF47752 METD_RS21830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|PTHR11689|PTHR11689:SF96|SSF81340 METD_RS21835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF27|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS21840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF3|SSF111369|TIGR01730 METD_RS21845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018895 Protein of unknown function DUF2474 PF10617 METD_RS21850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|PTHR30365|PTHR30365:SF4|TIGR00203 METD_RS21855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PIRSF006446|PTHR30365|PTHR30365:SF8 METD_RS21860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF9 METD_RS21865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|SM00418|SSF46785 METD_RS21870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF110|SM00849|SSF56281 METD_RS21875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000866|IPR012336|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|SSF52833 METD_RS21880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005939|IPR023753|IPR029021 Beta-lactamase hydrolase-like|FAD/NAD(P)-binding domain|Protein-tyrosine phosphatase-like GO:0016491|GO:0016787|GO:0055114 G3DSA:3.50.50.60|G3DSA:3.90.190.10|PF04273|PF07992|PTHR10632|PTHR10632:SF2|SSF51905|TIGR01244 METD_RS21890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF793|SSF53474 METD_RS21895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|PTHR30535:SF16|SSF53807 METD_RS21900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF34|SSF81345 METD_RS21905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF582|SM00382|SSF52540 METD_RS21910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|PTHR19372|PTHR19372:SF9|SSF56524 METD_RS21915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 G3DSA:1.20.950.20|PF01292|PTHR30485|PTHR30485:SF1|SSF81342 METD_RS21920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008715|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 G3DSA:3.40.50.150|PF05401|PTHR10108|SSF53335 METD_RS21925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02771|PTHR10909|PTHR10909:SF284|SSF47203|SSF56645 METD_RS21945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|SSF51430 METD_RS21955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF17|SSF52499 METD_RS21960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF4|SSF111369|TIGR01730 METD_RS21965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF8|SSF82693|SSF82714|SSF82866 METD_RS21970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004667|IPR020846 ADP/ATP carrier protein|Major facilitator superfamily domain GO:0005471|GO:0005524|GO:0006810|GO:0016021 G3DSA:1.20.1250.20|PTHR31187|SSF103473 METD_RS21975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040|IPR028939 NAD(P)-binding domain|Pyrroline-5-carboxylate reductase, catalytic, N-terminal G3DSA:3.40.50.720|PF03807|PTHR14239|SSF51735 METD_RS21980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|SSF51430 METD_RS21985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004398|IPR029063 RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168|GO:0031167 G3DSA:3.40.50.150|PF03602|PIRSF004553|PTHR18895|PTHR18895:SF60|SSF53335|TIGR00095 METD_RS21990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 METD_RS22000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005025|IPR014063|IPR029039 Arsenate resistance ArsH|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30041|PTHR30041:SF1|SSF52218|TIGR02690 METD_RS22005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12840|PR00778|PTHR33154|SM00418|SSF46785 METD_RS22010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF0|SSF52833|TIGR00014 METD_RS22015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002657|IPR004706 Arsenical-resistance protein Acr3|Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0015103|GO:0015297|GO:0016020|GO:0016021 PF01758|PIRSF005508|PTHR10361|PTHR10361:SF31|TIGR00832 METD_RS22020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013656|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08448|PF12860|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 METD_RS22025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF778|SSF53474 METD_RS22030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24322|PTHR24322:SF422|SSF51735 METD_RS22035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|PTHR11079|SSF53927 METD_RS22040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 METD_RS22055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237 METD_RS22065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025226 Protein of unknown function DUF4170 PF13773 METD_RS22070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 METD_RS22075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 G3DSA:3.10.50.30|PF01272|PTHR30437|PTHR30437:SF6|SSF54534 METD_RS22080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR014188|IPR016040|IPR020843 Acrylyl-CoA reductase AcuI|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF13|SM00829|SSF50129|SSF51735|TIGR02823 METD_RS22090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF00037|PF11953|PR00354|PS00198|PTHR11938|PTHR11938:SF101|SSF54862 METD_RS22095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003711 CarD-like/TRCF domain PF02559|PTHR38447|SM01058|SSF141259 METD_RS22100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000943|IPR007627|IPR007630|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04542|PF04545|PR00046|PS00715|PTHR30376|SSF88659|SSF88946|TIGR02937 METD_RS22120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002218|IPR004417|IPR020595|IPR023753 FAD/NAD(P)-binding domain|Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0005737|GO:0008033|GO:0016491|GO:0047151|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_01037|PF01134|PS01281|PTHR11806|PTHR11806:SF2|SSF51905|TIGR00137 METD_RS22125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001343|IPR011049|IPR018511 Haemolysin-type calcium-binding repeat|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|PS00330|SSF51120 METD_RS22130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF98|SM00228|SSF50156|SSF50494 METD_RS22135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|PTHR30173:SF31|SSF88659|SSF88946|TIGR02937 METD_RS22140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 PF10099 METD_RS22145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025737 MetA-pathway of phenol degradation, putative PF13557 METD_RS22150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 METD_RS22155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|PTHR32089:SF63|SSF58104 METD_RS22160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR013587 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Nitrate/nitrite sensing protein GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF08376|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS22165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 METD_RS22170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF11|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS22175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011006 CheY-like superfamily G3DSA:3.40.50.2300|SSF52172 METD_RS22180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003018|IPR011102|IPR013655|IPR013767|IPR029016 GAF domain|GAF domain-like|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515|GO:0006355 G3DSA:3.30.450.20|G3DSA:3.30.450.40|PF00989|PF01590|PF07536|PF08447|PTHR41523|SM00065|SM00086|SM00091|SM00911|SSF55781|SSF55785|TIGR00229 METD_RS22185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF22|SM00419|SSF46785|SSF51206 METD_RS22190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002053|IPR013781|IPR017853|IPR018077 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 25|Glycoside hydrolase, family 25 subgroup GO:0003796|GO:0005975|GO:0009253|GO:0016998 G3DSA:3.20.20.80|PF01183|PTHR34135|PTHR34135:SF2|SM00641|SSF51445 METD_RS22195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007438|IPR014519 Protein of unknown function DUF488|Uncharacterised conserved protein UCP024492 PF04343|PIRSF024492|PTHR39337 METD_RS22200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR010971|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF5|SSF51905|TIGR01988 METD_RS22215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR002364|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|PTHR11695|PTHR11695:SF605|SM00829|SSF50129|SSF51735 METD_RS22220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 METD_RS22225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PTHR11825|PTHR11825:SF55|SSF56752 METD_RS22230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 METD_RS22235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005801|IPR005802|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal|Para-aminobenzoate synthase, component I GO:0009058|GO:0009396|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|SSF56322|TIGR00553 METD_RS22240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007337|IPR026262 Antitoxin DinJ|RelB antitoxin/Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 PF04221|PIRSF003108|PTHR38781|PTHR38781:SF1|TIGR02384 METD_RS22245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004386|IPR007712 Toxin-antitoxin system, RelE/ParE toxin family|Toxin-antitoxin system, YafQ-like toxin PF15738|PIRSF006156|PTHR40588|SSF143011|TIGR02385 METD_RS22250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF57|SM00729|SSF102114|TIGR00089|TIGR01125 METD_RS22260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032808 DoxX family PF13564|PTHR36974 METD_RS22270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|PTHR30522|PTHR30522:SF0|SSF101386|TIGR00444 METD_RS22275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006881 Plasmid encoded RepA protein PF04796 METD_RS22280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 PF05066 METD_RS22285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|SSF52151 METD_RS22290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|PTHR32308:SF2|SSF51621 METD_RS22295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011722 Hemimethylated DNA-binding domain GO:0003677 PF08755|PTHR31350|PTHR31350:SF6|SM00992|SSF141255|TIGR02097 METD_RS22300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF710|SM00267|SSF55073|TIGR00254 METD_RS22310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 METD_RS22315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF20|SSF82693|SSF82714|SSF82866 METD_RS22320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003607|IPR006674|IPR006675 HD domain|HD/PDEase domain|HDIG domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604|TIGR00277 METD_RS22325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005925|IPR006035|IPR020855|IPR023696 Agmatinase-related|Ureohydrolase|Ureohydrolase domain|Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PR00116|PS01053|PTHR11358|PTHR11358:SF27|SSF52768|TIGR01230 METD_RS22330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 METD_RS22340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF20|SSF102645|SSF52507|TIGR00521 METD_RS22345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017035|IPR029464 Type I restriction enzyme R protein, N-terminal domain|Uncharacterised conserved protein UCP035009, HsdR, All3000-type PF13588|PIRSF035009|PTHR41907 METD_RS22355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain|UbiB domain GO:0006744 G3DSA:1.10.510.10|PF03109|PTHR10566|PTHR10566:SF79|SSF56112|TIGR01982 METD_RS22360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|PTHR10108|PTHR10108:SF24|SSF53335|TIGR01934 METD_RS22365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001796|IPR024072 Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 G3DSA:3.40.430.10|PF00186|SSF53597 METD_RS22370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|PTHR24322:SF337|SM00822|SSF51735 METD_RS22375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000836|IPR005854|IPR017932|IPR029055|IPR029057 Amidophosphoribosyltransferase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13537|PIRSF000485|PTHR11907|PTHR11907:SF0|SSF53271|SSF56235|TIGR01134 METD_RS22380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674|PTHR36926|PTHR36926:SF1 METD_RS22385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR13754|PTHR13754:SF13|SSF56281 METD_RS22390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003782|IPR012336 Copper chaperone SCO1/SenC|Thioredoxin-like fold G3DSA:3.40.30.10|PF02630|PTHR12151|SSF52833 METD_RS22395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|SM00382|SSF52540|SSF54211|TIGR00416 METD_RS22400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|PTHR30511:SF0|SM01005|SSF50621|SSF51419|TIGR00492 METD_RS22405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SM00382|SSF48024|SSF52540|TIGR00665 METD_RS22410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|SSF55653|SSF55658|TIGR00158 METD_RS22415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018710 Protein of unknown function DUF2232 PF09991 METD_RS22420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|SSF46911|TIGR00165 METD_RS22425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PTHR21011|SSF54995|TIGR00166 METD_RS22430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|PTHR23091|SSF55729 METD_RS22435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011993|IPR012544 Bacterial Pleckstrin homology domain|PH domain-like G3DSA:2.30.29.50|PF08000|PTHR35796|SSF50729 METD_RS22450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 METD_RS22460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|SSF56420 METD_RS22470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF19|SSF56935 METD_RS22475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022224 Protein of unknown function DUF3750 PF12570 METD_RS22485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|PTHR23091|PTHR23091:SF210|SSF55729 METD_RS22490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR30354|PTHR30354:SF7 METD_RS22495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001991|IPR018107 Sodium:dicarboxylate symporter|Sodium:dicarboxylate symporter, conserved site GO:0015293|GO:0016021 G3DSA:1.10.3860.10|PF00375|PR00173|PS00714|PTHR11958|PTHR11958:SF47|SSF118215 METD_RS22500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR32487|PTHR32487:SF0|SSF51735 METD_RS22505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF25|SSF48557 METD_RS22510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025388 Alginate export domain PF13372 METD_RS22515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530 METD_RS22520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR30085|PTHR30085:SF2|SM00062|SSF53850 METD_RS22525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR010065|IPR030202 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0005215|GO:0006810|GO:0006865|GO:0016020|GO:0016021|GO:0043190 G3DSA:1.10.3720.10|PF00528|PTHR30085|PTHR30085:SF4|SSF161098|TIGR01726 METD_RS22530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR010065|IPR030205 ABC transporter type 1, transmembrane domain MetI-like|Amino acid ABC transporter, permease protein, 3-TM domain|Glutamate/aspartate transport system permease protein GltK/AatM GO:0005215|GO:0006810|GO:0006865|GO:0016020|GO:0016021|GO:0043190 G3DSA:1.10.3720.10|PF00528|PTHR30614|PTHR30614:SF1|SSF161098|TIGR01726 METD_RS22535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030206|IPR030679 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-type amino acid transport system, ATPase component, HisP-type|Glutamate/aspartate transport ATP-binding protein GltL/AatP|P-loop containing nucleoside triphosphate hydrolase GO:0003333|GO:0005524|GO:0006865|GO:0015424|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PIRSF039085|PS00211|PTHR24220|PTHR24220:SF317|SM00382|SSF52540 METD_RS22540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657|PTHR34821 METD_RS22545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PF02040|PR00758|PTHR10283|PTHR10283:SF21 METD_RS22555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025711 PepSY domain PF03413 METD_RS22560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR011991|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like|Winged helix-turn-helix DNA-binding domain GO:0016787 G3DSA:1.10.10.10|G3DSA:3.90.79.10|PF00293|PTHR22769|PTHR22769:SF42|SSF46785|SSF55811 METD_RS22565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001107 Band 7 domain PF01145|SSF117892 METD_RS22570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|PF01513|SSF111331 METD_RS22575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR001451|IPR009081|IPR010071|IPR011004|IPR012728|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Hexapeptide repeat|Non-ribosomal peptide synthetase, C-terminal|Phosphopantetheine binding ACP domain|Trimeric LpxA-like GO:0003824|GO:0008152 G3DSA:1.10.1200.10|G3DSA:2.160.10.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00132|PF00501|PF00550|PF13193|PS00455|PTHR24095|SSF47336|SSF51161|SSF56801|TIGR01733|TIGR02353 METD_RS22585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016368|IPR019199 Virulence-associated protein D|Virulence-associated protein D / CRISPR associated protein Cas2 PF09827|PIRSF002882 METD_RS22590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000383|IPR029058 Alpha/Beta hydrolase fold|Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 G3DSA:3.40.50.1820|PF02129|PTHR12277|PTHR12277:SF79|SSF53474 METD_RS22595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF20|SSF53383 METD_RS22600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|PTHR30508|PTHR30508:SF1|SSF101960|TIGR01980 METD_RS22605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR010230|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF85|SM00382|SSF52540|TIGR01978 METD_RS22610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|PTHR30508|PTHR30508:SF0|SSF101960 METD_RS22615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PS00595|PTHR11601|PTHR11601:SF17|SSF53383|TIGR01979 METD_RS22620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002744|IPR014291 Domain of unknown function DUF59|SUF system FeS cluster assembly associated PF01883|PTHR13696|PTHR13696:SF62|SSF117916|TIGR02945 METD_RS22625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 METD_RS22630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000361|IPR016092 FeS cluster biogenesis|FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PTHR10072|SSF89360|TIGR00049 METD_RS22635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 METD_RS22640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540 METD_RS22650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|PTHR34001|SSF56925 METD_RS22670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021327 Protein of unknown function DUF2934 PF11154 METD_RS22680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|PTHR18901:SF33|SSF56784|TIGR01549 METD_RS22690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF509|SM00382|SSF52540 METD_RS22695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008265|IPR013830 Lipase, GDSL, active site|SGNH hydrolase-type esterase domain GO:0006629|GO:0016298 G3DSA:3.40.50.1110|PF13472|PS01098|PTHR30383|SSF52266 METD_RS22700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004175|IPR009097 RNA 2',3'-cyclic phosphodiesterase|RNA ligase/cyclic nucleotide phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|MF_01940|PF13563|PTHR35561|PTHR35561:SF1|SSF55144|TIGR02258 METD_RS22710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PTHR33910|PTHR33910:SF1|TIGR00964 METD_RS22715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|PTHR30265|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 METD_RS22720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000911|IPR006519|IPR020783|IPR020784 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PTHR11661|SM00649|SSF46906|SSF54747|TIGR01632 METD_RS22725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF51|SSF56808|TIGR01169 METD_RS22730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001128|IPR002397|IPR017972 Cytochrome P450|Cytochrome P450, B-class|Cytochrome P450, conserved site GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|PF00067|PR00359|PR00385|PS00086|PTHR11712|SSF48264 METD_RS22735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR016156|IPR023753|IPR028202 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Reductase, C-terminal GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PF14759|PR00368|PR00411|PTHR22912|PTHR22912:SF180|SSF51905|SSF55424 METD_RS22740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.30.70.20|PF13370|PTHR36923|SSF54862 METD_RS22750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 METD_RS22755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 METD_RS22760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF19|SM00729|SM00876|SSF102114|TIGR00433 METD_RS22770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF71|SSF56529 METD_RS22775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) G3DSA:2.40.160.60|PF03349|PTHR35093|PTHR35093:SF2|SSF56935 METD_RS22780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|PTHR21363|PTHR21363:SF0|SSF48179|SSF51735 METD_RS22785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001633|IPR005330|IPR029787 EAL domain|GGDEF domain|MHYT domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF03707|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 METD_RS22790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006638|IPR007197|IPR023404|IPR023970|IPR025274 Domain of unknown function DUF4070|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0051536 G3DSA:3.80.30.20|PF04055|PF13282|PTHR11918|PTHR11918:SF63|SM00729|SSF102114 METD_RS22795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 METD_RS22805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PD968187|PF00466|PS01109|PTHR11560|SSF160369 METD_RS22810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|PTHR24089|PTHR24089:SF272|SSF48300|SSF54736|TIGR00855 METD_RS22815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 METD_RS22820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 METD_RS22825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 G3DSA:3.40.190.10|PF13416|PIRSF019574|PR00909|PTHR30222|PTHR30222:SF11|SSF53850 METD_RS22830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|SSF55298 METD_RS22835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007341 Transglycosylase-associated protein GO:0016021 PF04226|PTHR33884|PTHR33884:SF1 METD_RS22840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002577|IPR011991 Helix-turn-helix, HxlR type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF01638|PTHR33204|PTHR33204:SF15|SSF46785 METD_RS22845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 METD_RS22850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|PTHR11260:SF253|SSF47616|SSF52833 METD_RS22855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR010917|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, conserved site|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PS01156|PTHR32552|PTHR32552:SF10|SSF56935|TIGR01783 METD_RS22860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 METD_RS22865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 METD_RS22870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060|PTHR11785|PTHR11785:SF405 METD_RS22875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004808|IPR005135|IPR020847 AP endonuclease 1|AP endonuclease 1, binding site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00726|PTHR22748|PTHR22748:SF7|SSF56219|TIGR00633 METD_RS22880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 METD_RS22885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PTHR10799|PTHR10799:SF774|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 METD_RS22890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004564|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA-like G3DSA:2.50.20.10|PF03548|PTHR35869|SSF89392 METD_RS22895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002543|IPR003593|IPR011991|IPR018541|IPR027417 AAA+ ATPase domain|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PTHR22683|PTHR22683:SF41|SM00382|SM00843|SSF46785|SSF52540 METD_RS22900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003010|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|PTHR23090|PTHR23090:SF9|SSF52402|SSF56317 METD_RS22905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS22910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR004358|IPR011102|IPR011495 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, HWE region|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0004673|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF07568|PF13426|PR00344|PTHR24351|PTHR24351:SF76|SM00086|SM00091|SM00387|SM00911|SSF55785|SSF55874|TIGR00229 METD_RS22915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR12778|SSF103473 METD_RS22920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR024787 EcsC protein PF12787 METD_RS22930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009915 NnrU domain PF07298 METD_RS22935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018704 Tetratricopeptide repeat-like domain PF09976 METD_RS22940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF68|SSF52540|TIGR00231|TIGR03594 METD_RS22945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF5 METD_RS22950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006336|IPR011793 Glutamate--cysteine ligase, GCS2|Putative glutamate--cysteine ligase YbdK GO:0004357|GO:0016879|GO:0042398 MF_01609|PF04107|PTHR36510|PTHR36510:SF1|SSF55931|TIGR02050 METD_RS22955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR020629 DNA glycosylase/AP lyase, H2TH DNA-binding|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PTHR22993|PTHR22993:SF15|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 METD_RS22965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF7|SSF46785 METD_RS22970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PTHR22912|PTHR22912:SF159|SSF51905 METD_RS22975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001466|IPR012338|IPR021860 Beta-lactamase-related|Beta-lactamase/transpeptidase-like|Peptidase S12, Pab87-related, C-terminal G3DSA:3.40.710.10|PF00144|PF11954|PTHR22935|PTHR22935:SF68|SSF56601 METD_RS22980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS22985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Thioredoxin-like fold G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF14497|PTHR11571|PTHR11571:SF139|SSF47616|SSF52833 METD_RS22990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009282|IPR027405 Protein of unknown function DUF937|YidB-like G3DSA:1.10.10.690|PF06078|SSF140804 METD_RS23000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 METD_RS23005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552 METD_RS23010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like PF01850|PTHR36173|PTHR36173:SF2|SSF88723 METD_RS23015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 METD_RS23020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032808 DoxX family PF07681|PTHR33452|PTHR33452:SF1 METD_RS23025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PTHR10374|PTHR10374:SF14|SSF54593 METD_RS23035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991|IPR027395 Winged helix DNA-binding domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13601|PTHR37318|SSF46785 METD_RS23040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 METD_RS23045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006158|IPR006638|IPR007197|IPR011772|IPR023404|IPR023970 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0015995|GO:0016709|GO:0031419|GO:0046872|GO:0050661|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF70|SM00729|SSF102114|TIGR02026 METD_RS23050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24188|SM00248|SSF48403 METD_RS23055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000577|IPR005999|IPR018483|IPR018484|IPR018485 Carbohydrate kinase, FGGY|Carbohydrate kinase, FGGY, C-terminal|Carbohydrate kinase, FGGY, N-terminal|Carbohydrate kinase, FGGY, conserved site|Glycerol kinase GO:0004370|GO:0005975|GO:0006072|GO:0016773 G3DSA:3.30.420.40|MF_00186|PF00370|PF02782|PIRSF000538|PS00933|PTHR10196|PTHR10196:SF69|SSF53067|TIGR01311 METD_RS23060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PTHR32268|PTHR32268:SF11|SSF53474 METD_RS23065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR024478 4HB MCP domain|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF12729|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS23070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004129|IPR017946|IPR030395 Glycerophosphodiester phosphodiesterase domain|Glycerophosphoryl diester phosphodiesterase|PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081|GO:0008889 G3DSA:3.20.20.190|PF03009|PTHR23344|PTHR23344:SF20|SSF51695 METD_RS23075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006175|IPR013813 Endoribonuclease L-PSP/chorismate mutase-like|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF14588|PTHR11803|PTHR11803:SF2|SSF55298 METD_RS23080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005074|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0006810|GO:0008233|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PF03412|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 METD_RS23085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003997|IPR006144 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|PTHR30386|PTHR30386:SF8 METD_RS23095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR018060 DNA binding HTH domain, AraC-type|Homeodomain-like GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PTHR11019|PTHR11019:SF105|SM00342|SSF46689 METD_RS23100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PS00600|PTHR11986|PTHR11986:SF79|SSF53383|TIGR00707 METD_RS23105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PTHR11405|PTHR11405:SF1|SSF53671|TIGR00658 METD_RS23115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013538|IPR023393 Activator of Hsp90 ATPase homologue 1-like|START-like domain GO:0006950 G3DSA:3.30.530.20|PF08327|PTHR36929|PTHR36929:SF1|SSF55961 METD_RS23120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR34109|PTHR34109:SF1|SSF54593 METD_RS23125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 METD_RS23130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF176|SSF51905|SSF55424 METD_RS23135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001294|IPR003018|IPR003594|IPR011495|IPR013515|IPR013654|IPR013767|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|PAS fold-2|Phytochrome|Phytochrome, central region|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515|GO:0006355|GO:0009584|GO:0018298 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00360|PF00989|PF01590|PF02518|PF07568|PF08446|PR01033|PTHR24423|PTHR24423:SF518|SM00065|SM00091|SM00387|SSF55781|SSF55785|SSF55874 METD_RS23140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016053|IPR016084 Haem oxygenase-like|Haem oxygenase-like, multi-helical GO:0004392|GO:0006788|GO:0055114 G3DSA:1.20.910.10|PF01126|SSF48613 METD_RS23145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|TIGR03476 METD_RS23165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000326|IPR026841 Inositolphosphotransferase Aur1/Ipt1|Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF14378|SSF48317 METD_RS23170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417|IPR029995 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain|Transcriptional regulatory protein FlbD GO:0000160|GO:0003677|GO:0003700|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF21|SM00382|SSF46689|SSF52172|SSF52540 METD_RS23175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|PTHR30034|PTHR30034:SF1|SSF101801|TIGR02480 METD_RS23180 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE PF02108 METD_RS23185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|PTHR30534|PTHR30534:SF0|SSF48029|TIGR00207 METD_RS23190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206 METD_RS23195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009534|IPR010921|IPR011991 Protein of unknown function DUF1153|Trp repressor/replication initiator|Winged helix-turn-helix DNA-binding domain GO:0043565 G3DSA:1.10.10.10|PF06627|SSF48295 METD_RS23200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005648|IPR025963|IPR025965 Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain PF03963|PF13860|PF13861|PTHR30435|PTHR30435:SF15 METD_RS23205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 METD_RS23210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|PTHR11933:SF10|SSF52402|TIGR00420 METD_RS23215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 METD_RS23220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677 METD_RS23225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF534|SM00387|SSF55874 METD_RS23230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|PTHR11002|PTHR11002:SF17|SM00947|SSF53056 METD_RS23235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF51|SSF103473|TIGR00711 METD_RS23240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|PTHR30386|PTHR30386:SF7|SSF111369 METD_RS23245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF14246|PR00455|PS01081|PTHR30055|PTHR30055:SF76|SSF46689|SSF48498 METD_RS23250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF12806|PTHR10909|PTHR10909:SF296|SSF47203|SSF56645 METD_RS23255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005145|IPR006070|IPR010923|IPR017945 DHBP synthase RibB-like alpha/beta domain|Putative GTP-binding controlling metal-binding domain|YrdC-like domain|tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 GO:0003725 G3DSA:3.90.870.10|PF01300|PF03481|PIRSF004930|PTHR17490|PTHR17490:SF3|SSF55821|TIGR00057 METD_RS23260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013656 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS23265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011649|IPR012336 KaiB domain|Thioredoxin-like fold GO:0048511 G3DSA:3.40.30.10|PF07689|PTHR41709|PTHR41709:SF2|SM01248|SSF52833 METD_RS23270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011649|IPR012336 KaiB domain|Thioredoxin-like fold GO:0048511 G3DSA:3.40.30.10|PF07689|PTHR41709|PTHR41709:SF1|SM01248|SSF52833 METD_RS23275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014774|IPR025662|IPR027417|IPR030665 Circadian clock protein kinase KaiC|KaiC-like domain|P-loop containing nucleoside triphosphate hydrolase|Sigma-54 interaction domain, ATP-binding site 1 G3DSA:3.40.50.300|PF06745|PIRSF039117|PS00675|PTHR22942|PTHR22942:SF43|SSF52540 METD_RS23285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS23290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 G3DSA:3.30.565.10|PF02518|PTHR24423|PTHR24423:SF496|SM00387|SSF47384|SSF55874 METD_RS23295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF316|SM00448|SM00862|SSF46894|SSF52172 METD_RS23300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025711 PepSY domain PF03413 METD_RS23305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016071 Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|SM00318|SSF50199 METD_RS23315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021762 Protein of unknown function DUF3325 PF11804 METD_RS23320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219|PTHR34219:SF4 METD_RS23330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000531|IPR010105|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain|TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0006810|GO:0015891|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF17|SSF56935|TIGR01783 METD_RS23345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008979|IPR011041|IPR011042|IPR021720 Galactose-binding domain-like|Malectin|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 G3DSA:2.120.10.30|G3DSA:2.60.120.360|PF11721|PTHR13460|PTHR13460:SF0|SSF49785|SSF50952 METD_RS23350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PTHR22573|PTHR22573:SF28|SSF53738|SSF55957 METD_RS23355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006626|IPR011049|IPR011050|IPR012334|IPR018511 Hemolysin-type calcium-binding conserved site|Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor|Serralysin-like metalloprotease, C-terminal G3DSA:2.150.10.10|G3DSA:2.160.20.10|PF13229|PR00313|PS00330|SM00710|SSF51120|SSF51126 METD_RS23360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006626|IPR011049|IPR011050|IPR012334|IPR018511 Hemolysin-type calcium-binding conserved site|Parallel beta-helix repeat|Pectin lyase fold|Pectin lyase fold/virulence factor|Serralysin-like metalloprotease, C-terminal G3DSA:2.150.10.10|G3DSA:2.160.20.10|PF13229|PR00313|PS00330|SM00710|SSF51120|SSF51126 METD_RS23370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR003856|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF01656|PF02706|PTHR32309|PTHR32309:SF13|SSF52540 METD_RS23375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003362|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PF02397|PTHR30576|PTHR30576:SF4|TIGR03025 METD_RS23380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF234|SSF51735 METD_RS23385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PF03808|PTHR34136|TIGR00696 METD_RS23390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF399|SSF51735 METD_RS23395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003715|IPR019554 Polysaccharide export protein|Soluble ligand binding domain GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PF10531|PTHR33619 METD_RS23400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|PTHR12526|PTHR12526:SF387|SSF51182|SSF53448|TIGR01479 METD_RS23410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF570|SM00421|SM00448|SSF46894|SSF52172 METD_RS23420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011045|IPR011964|IPR015943|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|G3DSA:3.10.180.10|PF02239|PTHR13833|SSF50974|TIGR02276 METD_RS23425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|PTHR39332|PTHR39332:SF2|SSF55961 METD_RS23430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035 von Willebrand factor, type A PF13519|SM00327|SSF53300 METD_RS23440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SM00327|SSF53300 METD_RS23450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002035 von Willebrand factor, type A SSF53300 METD_RS23455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001270|IPR003593|IPR011703|IPR016366|IPR027417 AAA+ ATPase domain|ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|ClpA/B family|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PR00300|PTHR11603|SM00382|SSF52540 METD_RS23460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003420 Methanol dehydrogenase, beta subunit GO:0004022|GO:0015946|GO:0055114 G3DSA:4.10.160.10|PF02315|PIRSF029163|SSF48666 METD_RS23465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056|IPR009153 Cytochrome c-like domain|Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF13442|PIRSF000008|SSF46626|TIGR03872 METD_RS23470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001638|IPR022455 Methanol oxidation system protein MoxJ|Solute-binding protein family 3/N-terminal domain of MltF GO:0042597|GO:0046170 G3DSA:3.40.190.10|PF00497|SM00062|SSF53850|TIGR03870 METD_RS23475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001479|IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily|Quinoprotein dehydrogenase, conserved site GO:0005509|GO:0016020|GO:0016614|GO:0030288|GO:0055114 G3DSA:2.140.10.10|PF01011|PF13360|PS00363|PS00364|PTHR32303|PTHR32303:SF6|SM00564|SSF50998|TIGR03075 METD_RS23480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|PF13365|SSF50494 METD_RS23490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279|IPR025638 Metallo-beta-lactamase|Protein of unknown function DUF4336 PF14234|PTHR33835|SSF56281 METD_RS23495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF107|SM00849|SSF56281 METD_RS23500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018719 Protein of unknown function DUF2243, membrane PF10002 METD_RS23510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PF14602|PS00101|PTHR22572|PTHR22572:SF115|SSF51161|SSF53448|TIGR01173 METD_RS23515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|PTHR10937|PTHR10937:SF0|SSF53697|SSF56235|TIGR01135 METD_RS23520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF1|SSF143744 METD_RS23525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 METD_RS23535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR011545|IPR012340|IPR014001|IPR027417 DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PTHR24031|PTHR24031:SF249|SM00487|SM00490|SSF50249|SSF52540 METD_RS23540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005631 Flavinator of succinate dehydrogenase G3DSA:1.10.150.250|PF03937|PTHR12469|PTHR12469:SF3|SSF109910 METD_RS23545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 METD_RS23550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 METD_RS23570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.40.50.980|PF00501|PTHR24096|SSF56801 METD_RS23575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF438|SM00387|SM00388|SSF47384|SSF55874 METD_RS23580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF438|SM00448|SSF52172 METD_RS23590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|PTHR24095:SF169|SSF56801 METD_RS23600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13231|PTHR33908|PTHR33908:SF3 METD_RS23605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF49|SSF53448 METD_RS23610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011499|IPR014546 Lipid A biosynthesis|Uncharacterised conserved protein, lipid A biosynthesis GO:0008915|GO:0009245 PD339292|PF07578|PIRSF028440|SM01259 METD_RS23615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021279 Protein of unknown function DUF2721 PF11026 METD_RS23620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF13738|PR00411|PTHR23023|PTHR23023:SF132|SSF51905 METD_RS23625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|SSF53474 METD_RS23630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 METD_RS23635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003846 Uncharacterised protein family UPF0061 PF02696|PTHR12153 METD_RS23640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007367|IPR009057|IPR011991 Homeodomain-like|Protein of unknown function DUF433|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF04255|PTHR34849|SSF46689 METD_RS23650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF12|SSF103481 METD_RS23655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR011495|IPR025201 Histidine kinase-like ATPase, C-terminal domain|Sensor protein KdpD, transmembrane domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain G3DSA:1.20.120.620|G3DSA:3.30.565.10|PF02518|PF07568|PF13493|PTHR24423|PTHR24423:SF472|SM00387|SSF55874 METD_RS23660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|PTHR30383:SF5|SSF52266 METD_RS23665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009050|IPR012292 Globin-like|Globin/Protoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|SSF46458 METD_RS23670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|PTHR12553:SF7|SSF56281 METD_RS23675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised deoxyribonuclease TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01137|PTHR10060|PTHR10060:SF20|SSF51556|TIGR00010 METD_RS23680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001412|IPR009080|IPR014729|IPR014758|IPR015413|IPR023457 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Methionine-tRNA synthetase, type 2|Methionyl-tRNA synthetase|Methionyl/Leucyl tRNA synthetase|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.170.220.10|G3DSA:3.40.50.620|MF_01228|PF09334|PR01041|PS00178|PTHR11946|PTHR11946:SF1|SSF47323|SSF52374|TIGR00398 METD_RS23695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF13177|PTHR11669|PTHR11669:SF8|SSF52540 METD_RS23700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018094|IPR018095|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|PTHR10344|SSF52540|TIGR00041 METD_RS23705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30222|PTHR30222:SF1|SSF161098 METD_RS23710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30193|PTHR30193:SF5|SSF161098 METD_RS23715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR008995|IPR013611|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0016887|GO:0043190 G3DSA:3.40.50.300|PF00005|PF08402|PS00211|PTHR24220|PTHR24220:SF481|SM00382|SSF50331|SSF52540 METD_RS23720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF30|SM00100|SSF46785|SSF51206 METD_RS23730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014600|IPR019286 Protein of unknown function DUF2339, transmembrane|Uncharacterised conserved protein UCP035905, membrane protein PF10101|PIRSF035905|PTHR38434|PTHR38434:SF1 METD_RS23740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000849|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PIRSF002808|PTHR11662|PTHR11662:SF250|SSF103473 METD_RS23745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PTHR21152|PTHR21152:SF21|SSF53383 METD_RS23750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF384|SM00345|SM00895|SSF46785|SSF48008 METD_RS23755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013022|IPR017643|IPR026040 Hydroxypyruvate isomerase|Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PIRSF006241|PTHR12110|PTHR12110:SF3|SSF51658|TIGR03234 METD_RS23760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF564|SSF51735 METD_RS23765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR016167|IPR016169|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PF13183|PS00198|PTHR11748|PTHR11748:SF35|SSF46548|SSF55103|SSF56176 METD_RS23770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009656|IPR010915|IPR029058 Alpha/Beta hydrolase fold|PHB de-polymerase, C-terminal|Polyhydroxyalkanoate depolymerase G3DSA:3.40.50.1820|PF06850|PIRSF020818|SSF53474|TIGR01849 METD_RS23775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|SSF53720 METD_RS23780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028992 Hedgehog/Intein (Hint) domain G3DSA:2.170.16.10|PF13403|SSF51294 METD_RS23785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 PF02706|PTHR32309|PTHR32309:SF13 METD_RS23790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007016 O-antigen ligase-related PF04932 METD_RS23800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001172|IPR001543 Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|PTHR41277|SSF101801 METD_RS23805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0006464|GO:0009107|GO:0016415 G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|PTHR10993|PTHR10993:SF10|SSF55681|TIGR00214 METD_RS23810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 METD_RS23815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657|PTHR34821|PTHR34821:SF2 METD_RS23820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716 METD_RS23825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|SM00448|SSF52172 METD_RS23830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001646 Pentapeptide repeat PF00805|PTHR14136|PTHR14136:SF0|SSF141571 METD_RS23835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS23840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR004839|IPR011991|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0003824|GO:0006355|GO:0009058|GO:0030170 G3DSA:1.10.10.10|G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PF00392|PTHR11751|PTHR11751:SF386|SM00345|SSF46785|SSF53383 METD_RS23845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR12715|PTHR12715:SF9|SSF103481 METD_RS23850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF474|SM00421|SM00448|SSF46894|SSF52172 METD_RS23855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 METD_RS23860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009325 Protein of unknown function DUF983 PF06170 METD_RS23865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PF02652|PTHR30003|PTHR30003:SF0|TIGR00795 METD_RS23870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007760|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Manganese catalase G3DSA:1.20.1260.10|PF05067|PTHR30565|PTHR30565:SF3|SSF47240 METD_RS23875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002060|IPR008949 Isoprenoid synthase domain|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|PTHR21181|PTHR21181:SF13|SSF48576 METD_RS23880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007523 NDUFAF3/Mth938 domain-containing protein G3DSA:3.40.1230.10|PF04430|PTHR21192|PTHR21192:SF3|SSF64076 METD_RS23885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|SSF82866|TIGR00916|TIGR00966 METD_RS23890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005791|IPR022645|IPR022646|IPR022813 Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PTHR30081|PTHR30081:SF1|SSF82866|TIGR00916|TIGR01129 METD_RS23895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|PTHR33909|PTHR33909:SF1|SM01323|TIGR00739 METD_RS23900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008533|IPR027417 Domain of unknown function DUF815|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05673|PTHR13779|PTHR13779:SF28|SSF52540 METD_RS23905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 METD_RS23910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|PF01135|PTHR11579|SSF53335 METD_RS23915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|PTHR30457|SSF64167|TIGR00087 METD_RS23920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|SSF46589|SSF55681|TIGR00414 METD_RS23925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 PF08042|TIGR02107 METD_RS23930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 MF_00656|PF08042|TIGR02107 METD_RS23935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF13463|PS01117|SM00347|SSF46785 METD_RS23945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014748|IPR029045|IPR032259 ClpP/crotonase-like domain|Crontonase, C-terminal|Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF16113|PTHR11941|PTHR11941:SF53|SSF52096 METD_RS23950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|PTHR11458|SM01004|SSF51569 METD_RS23960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010432 RDD PF06271 METD_RS23965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007471|IPR007472|IPR016181|IPR017138|IPR030700 Acyl-CoA N-acyltransferase|Arginine-tRNA-protein transferase|Arginine-tRNA-protein transferase, C-terminal|Arginine-tRNA-protein transferase, N-terminal|Putative arginyl-tRNA--protein transferase, prokaryotic GO:0004057|GO:0016598 MF_00689|PF04376|PF04377|PIRSF037208|PTHR21367|PTHR21367:SF0|SSF55729 METD_RS23970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009241|IPR014056 Addiction module killer protein, predicted|Toxin HigB-like PF05973|PIRSF028744|PTHR41791|PTHR41791:SF1|TIGR02683 METD_RS23980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR011004|IPR018357|IPR024688 Hexapeptide repeat|Hexapeptide transferase, conserved site|Maltose/galactoside acetyltransferase|Trimeric LpxA-like GO:0016407|GO:0016740 G3DSA:2.160.10.10|PF00132|PF12464|PS00101|PTHR23416|PTHR23416:SF58|SM01266|SSF51161 METD_RS23985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PF04228|PTHR30168 METD_RS23990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|PTHR33693:SF1|SM00986|SM00987|SSF52141|TIGR00758 METD_RS23995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007859|IPR023753 ETF-QO/FixX|FAD/NAD(P)-binding domain GO:0016491|GO:0051536|GO:0055114 G3DSA:3.50.50.60|PF05187|PF13450|PR00420|PTHR10617|PTHR10617:SF107|SSF51905|SSF54373|SSF54862 METD_RS24000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005321|IPR016117 ArgJ-like domain|Peptidase S58, DmpA G3DSA:3.60.70.12|PF03576|PTHR36512|PTHR36512:SF3|SSF56266 METD_RS24005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000620|IPR004626 EamA domain|RarD protein GO:0005215|GO:0005887|GO:0006810|GO:0016020|GO:0016021 PF00892|PTHR22911|PTHR22911:SF41|SSF103481|TIGR00688 METD_RS24015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR023200 Ribosome modulation factor-like domain G3DSA:1.10.10.620 METD_RS24020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR006233|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|Cystathionine beta-lyase, bacterial|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004121|GO:0005737|GO:0006520|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PTHR11808|PTHR11808:SF45|SSF53383|TIGR01324 METD_RS24025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR002328|IPR011032|IPR013149|IPR013154|IPR016040|IPR027399 Alcohol dehydrogenase GroES-associated|Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|Alcohol dehydrogenase, zinc-type, conserved site|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PF13823|PS00059|PTHR11695|PTHR11695:SF281|SSF50129|SSF51735 METD_RS24035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.10.287.70|SSF81324 METD_RS24040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012349|IPR024624 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF12766|SSF50475 METD_RS24045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF08447|PF08448|PR00344|PTHR24423|PTHR24423:SF438|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS24050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PF13641|PTHR22916|PTHR22916:SF3|SSF53448 METD_RS24055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 METD_RS24060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|PTHR11579|SSF53335|TIGR00080 METD_RS24065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF145|SSF49764 METD_RS24075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 METD_RS24080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PS00073|PTHR10909|SSF47203|SSF56645 METD_RS24085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|SM00382|SSF52540 METD_RS24090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 METD_RS24095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002734|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|PF01872|SSF53597 METD_RS24100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:3.30.300.20|PF02566|SSF82784 METD_RS24105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF3|SSF143744 METD_RS24110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|PTHR30290|PTHR30290:SF10|SSF53850 METD_RS24115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF74|SSF161098 METD_RS24120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR025966 ABC transporter type 1, transmembrane domain MetI-like|Oligopeptide transport permease C-like, N-terminal domain GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PF12911|PTHR30465|PTHR30465:SF9|SSF161098 METD_RS24130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005828|IPR020846 Major facilitator superfamily domain|Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 G3DSA:1.20.1250.20|PF00083|PTHR24064|PTHR24064:SF172|SSF103473 METD_RS24140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010421 Protein of unknown function DUF1013 PF06242 METD_RS24145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF3|SSF46785|SSF53850 METD_RS24150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005025|IPR010089|IPR029039 Flavoprotein WrbA|Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0010181|GO:0016491|GO:0045892 G3DSA:3.40.50.360|MF_01017|PF03358|PTHR30546|PTHR30546:SF10|SSF52218|TIGR01755 METD_RS24155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012336|IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain|Thioredoxin-like fold G3DSA:3.40.30.10|PF11412|PF13899|PTHR32234|PTHR32234:SF3|SSF52833 METD_RS24160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|PTHR11361|PTHR11361:SF86|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 METD_RS24170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR007502|IPR010225|IPR013689|IPR014001|IPR027417 ATP-dependent RNA helicase HrpB, C-terminal|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase, ATP-dependent DEAH box, HrpB-type GO:0004386 G3DSA:3.40.50.300|PF00271|PF04408|PF08482|PIRSF005496|PTHR18934|SM00487|SM00490|SM00847|SSF52540|TIGR01970 METD_RS24185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR10374|PTHR10374:SF8|SSF54593 METD_RS24190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR004107|IPR010998|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF47823|SSF56349 METD_RS24195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PIRSF000709|PTHR23029|PTHR23029:SF1|SM00855|SSF53254 METD_RS24200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022300|IPR022488|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase-2-related|Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 G3DSA:3.40.50.300|PF03976|PTHR34383|SSF52540|TIGR03709 METD_RS24205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003959|IPR014555|IPR027417 ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|RecF-like GO:0005524 G3DSA:3.40.50.300|PF13304|PIRSF029347|PTHR32182|PTHR32182:SF13|SSF52540 METD_RS24210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005163|IPR005302|IPR011037|IPR015808 3-alpha domain|Molybdenum cofactor sulfurase, C-terminal|Molybdenum cofactor sulfurase, C-terminal-like|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 G3DSA:2.40.33.20|PF03473|PF03475|PTHR30212|PTHR30212:SF2|SSF50800 METD_RS24215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PTHR24322|PTHR24322:SF317|SSF51735 METD_RS24220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|PTHR24078|SM00271|SSF46565|SSF49493 METD_RS24225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032635 Surface antigen domain PF16998 METD_RS24230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000659|IPR011576|IPR012349|IPR019576|IPR019740 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase|Pyridoxamine 5'-phosphate oxidase, conserved site|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain|Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0004733|GO:0008615|GO:0010181|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.30.110.10|MF_01629|PF01243|PF10590|PIRSF000190|PS01064|PTHR10851|PTHR10851:SF0|SSF50475|TIGR00558 METD_RS24235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF458|SM00448|SSF52172 METD_RS24240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF264|SSF51735 METD_RS24250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|SSF55811 METD_RS24255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012645 Conserved hypothetical protein CHP02301 PF09539|TIGR02301 METD_RS24270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PS00483|PTHR11647|PTHR11647:SF1|SSF51338|SSF51556|TIGR00857 METD_RS24275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006222|IPR013977|IPR017703 Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|YgfZ/GcvT conserved site G3DSA:3.30.70.1400|PF01571|PF08669|PTHR22602|PTHR22602:SF0|SSF103025|TIGR03317 METD_RS24280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|PTHR30037|PTHR30037:SF4|SSF48150 METD_RS24285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|SSF109604 METD_RS24290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029021 Protein-tyrosine phosphatase-like G3DSA:3.90.190.10|SSF52799 METD_RS24295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PTHR34137|SSF116842|TIGR01280 METD_RS24300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 METD_RS24305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001424|IPR018152|IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone|Superoxide dismutase, copper/zinc binding domain|Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:2.60.40.200|PF00080|PS00087|PS00332|PTHR10003|PTHR10003:SF11|SSF49329 METD_RS24310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002877|IPR002942|IPR004538|IPR029063 Haemolysin A /rRNA methyltransferase TlyA|RNA-binding S4 domain|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0008168|GO:0032259 G3DSA:3.10.290.10|G3DSA:3.40.50.150|PF01479|PF01728|PIRSF005578|PTHR32319|PTHR32319:SF0|SM00363|SSF53335|SSF55174|TIGR00478 METD_RS24315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010280|IPR012340|IPR029063|IPR030390 (Uracil-5)-methyltransferase family|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|S-adenosyl-L-methionine-dependent methyltransferase GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|PF05958|PS01230|PTHR11061|PTHR11061:SF30|SSF53335 METD_RS24320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 PF04577|PTHR20961 METD_RS24325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR031811 AlgX, SGNH hydrolase-like domain PF16822 METD_RS24330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|PTHR13604|SSF143081 METD_RS24335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007434|IPR016181 Acyl-CoA N-acyltransferase|Peptidogalycan biosysnthesis/recognition G3DSA:3.40.630.30|PF04339|PTHR31384|PTHR31384:SF26|SSF55729 METD_RS24340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 METD_RS24345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001497|IPR004026|IPR008332|IPR009057|IPR011991|IPR014048|IPR016221|IPR018060 Ada DNA repair, metal-binding|Bifunctional regulatory protein Ada|DNA binding HTH domain, AraC-type|Homeodomain-like|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003824|GO:0003908|GO:0006281|GO:0006355|GO:0008168|GO:0008270|GO:0043565 G3DSA:1.10.10.10|G3DSA:1.10.10.60|G3DSA:3.30.160.70|G3DSA:3.40.10.10|PF01035|PF02805|PF12833|PIRSF000409|PS00374|PTHR10815|PTHR10815:SF9|SM00342|SSF46689|SSF46767|SSF53155|SSF57884|TIGR00589 METD_RS24350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PTHR13414|SSF160240|SSF161111|TIGR01297 METD_RS24355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PTHR23089|SSF54197 METD_RS24360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 METD_RS24370 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008928|IPR011613|IPR012341 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF00723|PTHR31616|PTHR31616:SF0|SSF48208 METD_RS24380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003764|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|PIRSF038994|PTHR11113|PTHR11113:SF7|SSF51338|SSF51556|TIGR00221 METD_RS24385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 G3DSA:3.40.50.10490|PF01380|PTHR10937|PTHR10937:SF8|SSF53697 METD_RS24390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001347|IPR005486 Glucokinase regulatory protein, conserved site|Sugar isomerase (SIS) GO:0005975|GO:0030246 G3DSA:3.40.50.10490|PF01380|PS01272|PTHR10088|SSF53697 METD_RS24395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005135|IPR027317 Endonuclease/exonuclease/phosphatase|PGAP2-interacting protein G3DSA:3.60.10.10|PF03372|PTHR14859|SSF56219 METD_RS24400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|PTHR11707|PTHR11707:SF29|SM00870|SSF53774 METD_RS24405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|SM00155|SSF56024 METD_RS24410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677|PTHR12677:SF5 METD_RS24420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104|PTHR23427|PTHR23427:SF6 METD_RS24425 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005171|IPR014210 Cytochrome C oxidase subunit IV, prokaryotes|Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 PF03626|PTHR36835|TIGR02847 METD_RS24430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000298|IPR013833|IPR014206|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle|Cytochrome o ubiquinol oxidase, subunit III GO:0004129|GO:0005886|GO:0008827|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF2|SSF81452|TIGR02842 METD_RS24435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000883|IPR014207|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome o ubiquinol oxidase, subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0016682|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF26|SSF81442|TIGR02843 METD_RS24440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002429|IPR006333|IPR008972|IPR010514|IPR011759 COX aromatic rich motif|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome o ubiquinol oxidase subunit II GO:0004129|GO:0005507|GO:0008827|GO:0016020|GO:0016021|GO:0016682|GO:0022900|GO:0055114 G3DSA:1.10.287.90|G3DSA:2.60.40.420|PF00116|PF06481|PTHR22888|PTHR22888:SF13|SSF49503|SSF81464|TIGR01433 METD_RS24445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PTHR23508|PTHR23508:SF16|SSF103473 METD_RS24450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF7|SSF82693|SSF82714|SSF82866 METD_RS24455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:1.20.1600.10|G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF14|SSF111369|TIGR01730 METD_RS24460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF7|SSF111369|TIGR01730 METD_RS24465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF71|SSF46689 METD_RS24470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 METD_RS24475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR004358|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0016021|GO:0016310|GO:0016772|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|PR00344|PTHR24421|SM00387|SSF55874 METD_RS24480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340|PTHR30007|PTHR30007:SF0 METD_RS24485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025668 Transposase DDE domain PF13586|PTHR30007|PTHR30007:SF0 METD_RS24490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SSF46894|SSF52172 METD_RS24495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SSF46894|SSF52172 METD_RS24500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF4|SSF53448 METD_RS24515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 METD_RS24520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 METD_RS24525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|SM00849|SSF56281 METD_RS24565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004919|IPR011089 Domain of unknown function DUF1524|Domain of unknown function DUF262 PF03235|PF07510|PTHR37292|PTHR37292:SF1 METD_RS24580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011335|IPR021754|IPR025103|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3320|Protein of unknown function DUF4011|Restriction endonuclease type II-like G3DSA:3.40.50.300|PF11784|PF13086|PF13087|PF13195|PF13245|PTHR10887|PTHR10887:SF340|SSF52540|SSF52980 METD_RS24590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013610 Domain of unknown function DUF1738 PF08401 METD_RS24615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF13177|PTHR11669|SM00382|SSF52540 METD_RS24620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase SSF52540 METD_RS24630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|PTHR11102:SF11|SM00671|SSF81901 METD_RS24635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|PF13365|SSF50494 METD_RS24645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009216 Virulence factor SrfB G3DSA:3.30.420.40|PF07520|PIRSF034585 METD_RS24650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017030 Virulence effector, SrfC PF10139|PIRSF034586 METD_RS24665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|PTHR23083|SM00028|SSF48452 METD_RS24670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13371|PF13432|PTHR23083|SM00028|SSF48452 METD_RS24675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00670|PS00671|PTHR10996|PTHR10996:SF161|SSF51735|SSF52283 METD_RS24680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30419|PTHR30419:SF2|SSF46785|SSF53850 METD_RS24690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 METD_RS24695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003086|IPR016085|IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19|Metalloprotease inhibitor I38|Protease inhibitor, beta-barrel domain GO:0004866|GO:0030288 G3DSA:2.40.128.10|PF02974|SSF50882 METD_RS24700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PTHR10996|PTHR10996:SF152|SSF51735|SSF52283 METD_RS24705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR015937|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF38|SSF53732|TIGR00170 METD_RS24720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|PTHR30055:SF34|SSF46689|SSF48498 METD_RS24725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF2|SSF111369|TIGR01730 METD_RS24730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF11|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS24735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16925|PR00455|PTHR30055|PTHR30055:SF20|SSF46689|SSF48498 METD_RS24740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF97|SSF52317 METD_RS24745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007395 Putative neutral zinc metallopeptidase PF04298|PTHR36434 METD_RS24750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000103|IPR000595|IPR014710|IPR018488|IPR018490|IPR023753 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|RmlC-like jelly roll fold GO:0016491|GO:0055114 G3DSA:2.60.120.10|G3DSA:3.50.50.60|PF00027|PF07992|PR00368|PR00469|PS00888|PTHR22912|PTHR22912:SF138|SM00100|SSF51206|SSF51905 METD_RS24755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009057|IPR011051|IPR014710|IPR018060|IPR018062|IPR032783 AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|G3DSA:2.60.120.10|PF12833|PF12852|PS00041|PTHR11019|PTHR11019:SF77|SM00342|SSF46689|SSF51182 METD_RS24760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005325 Protein of unknown function DUF308, membrane PF03729 METD_RS24765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PF13450|PR00420|PTHR10742|SSF51905|SSF54373 METD_RS24770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002818|IPR029062 Class I glutamine amidotransferase-like|DJ-1/PfpI G3DSA:3.40.50.880|PF01965|PTHR11019|PTHR11019:SF25|SSF52317 METD_RS24775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022016 Domain of unknown function DUF3597 PF12200|SSF158634 METD_RS24780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|SSF53850 METD_RS24785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF8|SSF161098 METD_RS24790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR017871|IPR025662|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Sigma-54 interaction domain, ATP-binding site 1 GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PS00675|PTHR24220|SM00382|SSF52540 METD_RS24795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029024 TerB-like G3DSA:1.10.3680.10|SSF158682 METD_RS24805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|PTHR23115|PTHR23115:SF69|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 METD_RS24810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SSF51735 METD_RS24825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF112|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 METD_RS24830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002942 RNA-binding S4 domain GO:0003723 G3DSA:3.10.290.10|PF01479|SM00363|SSF55174 METD_RS24835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001650|IPR027417 Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00271|PTHR12131|PTHR12131:SF4|SM00490|SSF52540 METD_RS24845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021457 Protein of unknown function DUF3108 PF11306 METD_RS24850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.40.367.20|PF02685|PTHR30514|PTHR30514:SF0|SSF53067 METD_RS24855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003337|IPR006379|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Trehalose-phosphatase GO:0003824|GO:0005992 G3DSA:3.40.50.1000|PF02358|PTHR10788|PTHR10788:SF42|SSF56784|TIGR00685|TIGR01484 METD_RS24860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007361 Domain of unknown function DUF427 PF04248|PTHR34310|PTHR34310:SF2 METD_RS24865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|PTHR22935|PTHR22935:SF77|SSF56601 METD_RS24870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000060|IPR018093 BCCT transporter family|BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 PF02028|PS01303|PTHR30047|PTHR30047:SF2|TIGR00842 METD_RS24875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002023|IPR012336 NADH-quinone oxidoreductase subunit E-like|Thioredoxin-like fold GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF01257|PIRSF000216|PTHR10371|SSF52833 METD_RS24880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001949|IPR011538|IPR012336|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 G3DSA:3.40.30.10|PF01512|PF10589|PS00644|PS00645|PTHR11780|PTHR11780:SF0|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 METD_RS24885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR006478|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017896|IPR017900|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, prokaryotic, conserved site|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF10588|PF12838|PF13510|PIRSF036643|PS00198|PS00932|PTHR11615|PTHR11615:SF112|SM00926|SM00929|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01591 METD_RS24890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021074 Formate dehydrogenase, delta subunit PF11390 METD_RS24895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30419|PTHR30419:SF4|SSF46785|SSF53850 METD_RS24905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF52540|SSF82051|TIGR02729 METD_RS24915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13302|PTHR13256|SSF55729 METD_RS24920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 METD_RS24925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001787|IPR028909 Ribosomal protein L21|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PTHR21349|SSF141091|TIGR00061 METD_RS24930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417|IPR033186 Helicase HerA-like C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05872|PTHR30121|PTHR30121:SF3|SSF52540 METD_RS24940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13444|PTHR37323|PTHR37323:SF1|SSF55729 METD_RS24945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23521|SSF103473 METD_RS24960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002641|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PTHR14226|PTHR14226:SF24|SSF52151 METD_RS24965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:1.10.150.320|PF12836|SSF81585 METD_RS24975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021557 Protein of unknown function DUF3016 PF11454 METD_RS24980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001206|IPR016064 Diacylglycerol kinase, catalytic domain|NAD kinase/diacylglycerol kinase-like domain GO:0016301 PF00781|PTHR12358|SSF111331 METD_RS24985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR12905|PTHR12905:SF17|SSF56300 METD_RS24990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819|PTHR11819:SF138 METD_RS24995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021741 Protein of unknown function DUF3311 PF11755|PTHR40034|PTHR40034:SF1 METD_RS25000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PR00344|PTHR24423|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 METD_RS25005 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029024 TerB-like G3DSA:1.10.3680.10|SSF158682 METD_RS25010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF15|SSF53448 METD_RS25015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002575|IPR003442|IPR011009|IPR012180|IPR027417 Aminoglycoside phosphotransferase|P-loop containing nucleoside triphosphate hydrolase|Predicted bifunctional ATPase/phosphotransferase|Protein kinase-like domain|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.30.200.20|G3DSA:3.40.50.300|G3DSA:3.90.1200.10|PF01636|PF02367|PIRSF036599|PTHR33540|PTHR33540:SF2|SSF52540|SSF56112|TIGR00150 METD_RS25020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF12860|PR00344|PTHR24423|PTHR24423:SF486|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 METD_RS25025 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000043|IPR015878|IPR016040|IPR020082 Adenosylhomocysteinase|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|PTHR23420|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 METD_RS25030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 METD_RS25035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 METD_RS25040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001753|IPR029045 ClpP/crotonase-like domain|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF28|SSF52096 METD_RS25045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|SSF56219 METD_RS25050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001736|IPR025202 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824 G3DSA:3.30.870.10|PF13091|PTHR21248|PTHR21248:SF5|SM00155|SSF56024 METD_RS25055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014153|IPR027417 Double-strand break repair protein AddB|P-loop containing nucleoside triphosphate hydrolase PF12705|SSF52540|TIGR02786 METD_RS25060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000212|IPR011335|IPR014016|IPR014017|IPR014151|IPR027417 DNA helicase, AddA type|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF12705|PF13361|PTHR11070|PTHR11070:SF23|SSF52540|SSF52980|TIGR02784 METD_RS25065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|PTHR19328|SSF50952 METD_RS25070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|PTHR10438:SF256|SSF52833|TIGR01068 METD_RS25075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PTHR34001|SSF56925 METD_RS25080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001645|IPR004101|IPR013221|IPR018109 Folylpolyglutamate synthetase|Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF08245|PIRSF001563|PS01012|PTHR11136|PTHR11136:SF0|SSF53244|SSF53623|TIGR01499 METD_RS25085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|PTHR22855|PTHR22855:SF17|SSF52096|TIGR00515 METD_RS25090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002028|IPR011060|IPR013785 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PTHR10314|PTHR10314:SF4|SSF51366|TIGR00262 METD_RS25095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000086|IPR015375|IPR015376|IPR015797|IPR020084 NADH pyrophosphatase-like, N-terminal|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 G3DSA:3.90.79.10|PF00293|PF09296|PF09297|PS00893|PTHR22769|PTHR22769:SF7|SSF55811 METD_RS25100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001310|IPR011146|IPR026026 HIT-like domain|Histidine triad (HIT) protein|Histidine triad hydrolase, Hint-type GO:0003824 G3DSA:3.30.428.10|PF01230|PIRSF000714|PTHR23089|PTHR23089:SF13|SSF54197 METD_RS25105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF13487|SM00471|SSF109604|SSF52172 METD_RS25110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF03880|PS00039|PTHR24031|PTHR24031:SF145|SM00487|SM00490|SSF52540 METD_RS25120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003594|IPR003660|IPR004358|IPR011712|IPR032244 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|LapD/MoxY, periplasmic domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772|GO:0046983 G3DSA:3.30.565.10|PF00672|PF02518|PF07730|PF16448|PR00344|PTHR24421|PTHR24421:SF10|SM00304|SM00387|SSF55874 METD_RS25125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF458|SM00421|SM00448|SSF46894|SSF52172 METD_RS25130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004305|IPR016084 Haem oxygenase-like, multi-helical|Thiaminase-2/PQQC G3DSA:1.20.910.10|PF03070|PTHR20858|PTHR20858:SF20|SSF48613 METD_RS25135 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 PF13520|PIRSF006060|PTHR11785|PTHR11785:SF342 METD_RS25140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|PTHR12553:SF29|SM00849|SSF56281 METD_RS25145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PF03734|PTHR36699|SSF141523 METD_RS25150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR011527|IPR027417 ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PTHR24221|PTHR24221:SF161|SSF52540|SSF90123 METD_RS25155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021776 Protein of unknown function DUF3341 PF11821|PTHR34856 METD_RS25165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026869|IPR029055 Nucleophile aminohydrolases, N-terminal|Putative glutamine amidotransferase type 2 G3DSA:3.60.20.10|PF13230|PTHR11907|PTHR11907:SF10|SSF56235 METD_RS25170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF6|SSF88659|SSF88946|TIGR02937 METD_RS25175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS25185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008912 Uncharacterised protein family CoxE-like PF05762 METD_RS25190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR001055|IPR012675|IPR018298 2Fe-2S ferredoxin-type iron-sulfur binding domain|Adrenodoxin|Adrenodoxin, iron-sulphur binding site|Beta-grasp domain GO:0009055|GO:0051536|GO:0051537 G3DSA:3.10.20.30|PF00111|PR00355|PS00814|PTHR23426|SSF54292 METD_RS25195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|PF01627|SSF47226 METD_RS25200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000074 Apolipoprotein A/E GO:0005576|GO:0006869|GO:0008289|GO:0042157 G3DSA:1.20.120.20|PF01442|SSF58113 METD_RS25205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF01381|PF07883|PTHR10245|PTHR10245:SF9|SM00530|SSF47413|SSF51182 METD_RS25210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|PTHR20858|PTHR20858:SF17|SSF53613|TIGR00097 METD_RS25215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|PTHR20857:SF15|SSF51391|TIGR00693 METD_RS25220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011213|IPR011991|IPR015797 NUDIX hydrolase domain-like|Nicotinic acid mononucleotide biosynthesis protein|Winged helix-turn-helix DNA-binding domain GO:0016787 G3DSA:1.10.10.10|G3DSA:3.90.79.10|PIRSF019423|SSF46785|SSF55811 METD_RS25230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS25235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000534|IPR010136|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 2|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding GO:0003942|GO:0005737|GO:0006526|GO:0016620|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_01110|PF01118|PS01224|PTHR32338|PTHR32338:SF9|SM00859|SSF51735|SSF55347|TIGR01851 METD_RS25245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256 METD_RS25255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|PTHR18895|PTHR18895:SF3|SSF53335 METD_RS25260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000587|IPR000994|IPR028980|IPR029149|IPR032416 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, C-terminal domain|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|PF16188|PF16189|PTHR10804|PTHR10804:SF105|SSF53092|SSF55920 METD_RS25265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|PTHR11717:SF7|SM00226|SSF52788 METD_RS25270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011009|IPR016477 Fructosamine/Ketosamine-3-kinase|Protein kinase-like domain G3DSA:3.90.1200.10|PF03881|PIRSF006221|PTHR12149|SSF56112 METD_RS25275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF06472|PS00211|PTHR11384|PTHR11384:SF3|SM00382|SSF52540|SSF90123 METD_RS25290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR30212|PTHR30212:SF3|SSF50475 METD_RS25295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|SSF47616|SSF52833 METD_RS25300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF24|SSF46785|SSF53850 METD_RS25305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001433|IPR001709|IPR003097|IPR007202|IPR017938|IPR023173 4Fe-4S domain|FAD-binding, type 1|Flavoprotein pyridine nucleotide cytochrome reductase|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0016491|GO:0051536|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00667|PF04060|PR00371|PTHR19384|PTHR19384:SF76|SSF52343|SSF63380 METD_RS25310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005117|IPR006066|IPR006067|IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF03460|PR00397|PS00365|PTHR32439|PTHR32439:SF0|SSF55124|SSF56014|TIGR02435 METD_RS25315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004099|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0016491|GO:0045454|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF1|SSF51905 METD_RS25320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005890|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Nitrate transport ATP-binding subunit C/D|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015112|GO:0015706|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF361|SM00382|SSF52540|TIGR01184 METD_RS25325 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR005889 ABC transporter type 1, transmembrane domain MetI-like|Nitrate transport permease GO:0006810|GO:0015112|GO:0015706|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF7|SSF161098|TIGR01183 METD_RS25330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF10|SSF53850 METD_RS25335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10|PF13379|PTHR30024|PTHR30024:SF7|SSF53850 METD_RS25340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR005561|IPR008327|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF03861|PIRSF036382|PTHR26402|PTHR26402:SF567|SM01012|SSF52172 METD_RS25350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008928|IPR011613|IPR012341 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|PF00723|PTHR31616|PTHR31616:SF0|SSF48208 METD_RS25355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922|TIGR00232 METD_RS25360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001585|IPR001672|IPR004732|IPR013785|IPR018225 Aldolase-type TIM barrel|Phosphoglucose isomerase (PGI)|Transaldolase type 2|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004347|GO:0004801|GO:0005737|GO:0005975|GO:0006094|GO:0006096|GO:0006098 G3DSA:3.20.20.70|G3DSA:3.40.50.10490|MF_00493|PF00342|PF00923|PR00662|PS00958|PS01054|PTHR10683|PTHR10683:SF12|SSF51569|SSF53697|TIGR00876 METD_RS25365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF2 METD_RS25375 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PR00260|PTHR24422|PTHR24422:SF12|SM00086|SM00283|SSF55785|SSF58104|TIGR00229 METD_RS25380 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PTHR36839|PTHR36839:SF1|SSF56281 METD_RS25385 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|SM00822|SSF51735 METD_RS25390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF11|SSF82693|SSF82714|SSF82866|TIGR00915 METD_RS25395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF2|SSF111369|TIGR01730 METD_RS25400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 METD_RS25405 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.50.2000|PF13692|PTHR12526|PTHR12526:SF374|SSF53756 METD_RS25410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.30.450.20 METD_RS25415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001690|IPR016181 Acyl-CoA N-acyltransferase|Autoinducer synthase GO:0016740 G3DSA:3.40.630.30|PF00765|PR01549|PTHR39322|SSF55729 METD_RS25420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000792|IPR005143|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription factor LuxR-like, autoinducer-binding domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.80|PF00196|PF03472|PR00038|SM00421|SSF46894|SSF75516 METD_RS25430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 METD_RS25440 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008979 Galactose-binding domain-like G3DSA:2.60.120.260|PF13704|SSF49785 METD_RS25445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007657 Glycosyltransferase AER61, uncharacterised GO:0016757 PF04577 METD_RS25450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF02371|PTHR33055|PTHR33055:SF1 METD_RS25475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30118|PTHR30118:SF8|SSF46785|SSF53850 METD_RS25485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866 METD_RS25505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002372|IPR011047|IPR018391|IPR027295 Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|PF13360|PTHR32303|PTHR32303:SF2|SM00564|SSF50998 METD_RS25515 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003018|IPR003594|IPR011102|IPR011495|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, HWE region|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0004673|GO:0005515 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF07568|PF13185|PTHR24423|PTHR24423:SF472|SM00065|SM00387|SM00911|SSF55781|SSF55874 METD_RS25525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000674|IPR008274|IPR012368 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PIRSF036389|PTHR11908|PTHR11908:SF2|SM01008|SSF56003 METD_RS25530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF66|SSF47741|SSF54292 METD_RS25550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015813|IPR021135 Phosphoenolpyruvate carboxylase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0006099|GO:0008964|GO:0015977 PF00311|PR00150|SSF51621 METD_RS25565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005097|IPR016040|IPR025311 Domain of unknown function DUF4166|NAD(P)-binding domain|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF03435|PF13761|PTHR12286|SSF51735 METD_RS25570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009327|IPR011051|IPR014710 Cupin domain of unknown function DUF985|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF06172|PTHR33387|PTHR33387:SF2|SSF51182 METD_RS25575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000683|IPR004104|IPR008354|IPR016040 Glucose-fructose oxidoreductase, bacterial|NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PR01775|PTHR22604|PTHR22604:SF125|SSF51735|SSF55347 METD_RS25580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006750 Putative inner membrane exporter, YdcZ PF04657|PTHR34821 METD_RS25585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30579|PTHR30579:SF0|SSF46785|SSF53850 METD_RS25590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|SM00829|SSF50129|SSF51735 METD_RS25595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003018|IPR011006|IPR011102|IPR013655|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, HWE region GO:0004673|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.40.50.2300|PF07536|PF08447|PF13185|PTHR24423|SM00065|SM00086|SM00091|SM00911|SSF52172|SSF55781|SSF55785|TIGR00229 METD_RS25600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003646 SH3-like domain, bacterial-type PF08239 METD_RS25605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00081|PS00061|PTHR24322|SM00822|SSF51735 METD_RS25610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|PTHR11712|SM00825|SSF53901 METD_RS25615 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014030|IPR016039 Beta-ketoacyl synthase, N-terminal|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|SSF53901 METD_RS25620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013114|IPR029069 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain G3DSA:3.10.129.10|PF07977|PTHR30272|SSF54637 METD_RS25625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006162|IPR009081 Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|PS00012|SSF47336 METD_RS25635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF12 METD_RS25640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021266 Kdo hydroxylase PF11004 METD_RS25645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10 METD_RS25650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011051|IPR013096|IPR014710|IPR017102 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold|Uncharacterised conserved protein UCP037087 G3DSA:2.60.120.10|PF07883|PIRSF037087|SSF51182 METD_RS25660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF127|SSF49764 METD_RS25665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR11614|PTHR11614:SF100|SSF53474 METD_RS25670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011049|IPR013320|IPR018511 Concanavalin A-like lectin/glucanase domain|Hemolysin-type calcium-binding conserved site|Serralysin-like metalloprotease, C-terminal G3DSA:2.150.10.10|G3DSA:2.60.120.200|PR00313|PS00330|SSF49899|SSF51120|SSF55486 METD_RS25675 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000760|IPR011809|IPR020583 Histidinol-phosphate phosphatase, putative, inositol monophosphatase|Inositol monophosphatase|Inositol monophosphatase, metal-binding site GO:0004401|GO:0046854 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PS00629|PTHR20854|PTHR20854:SF38|SSF56655|TIGR02067 METD_RS25680 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716 METD_RS25685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005501|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|Uncharacterised protein family UPF0271, LamB/YcsF GO:0003824|GO:0005975 MF_00691|PF03746|PTHR30292|PTHR30292:SF0|SSF88713 METD_RS25690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002638|IPR006406|IPR007229 Nicotinate phosphoribosyltransferase|Nicotinate phosphoribosyltransferase family|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019357 G3DSA:3.20.140.10|MF_00570|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF16|SSF51690|SSF54675 METD_RS25695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF16242|PTHR34818|SSF50475 METD_RS25705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000808|IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|PTHR23264|SSF117916|SSF52540 METD_RS25710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|PF12804|PTHR19136|PTHR19136:SF81|SSF53448|TIGR02665 METD_RS25715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 METD_RS25720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|PTHR34001|SSF56925 METD_RS25725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 METD_RS25730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|PTHR11071|SSF50891 METD_RS25740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|PTHR11071|SSF50891 METD_RS25745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|PTHR24423:SF458|SM00448|SSF52172 METD_RS25750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017026|IPR027417 Inducible mutagenesis protein A|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PIRSF034285|SSF52540 METD_RS25755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001126 UmuC domain GO:0006281 PF00817|PTHR35369|PTHR35369:SF2|SSF56672 METD_RS25760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR023073|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, error-prone|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:3.20.20.140|MF_01902|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF4|SM00481|SSF89550|TIGR00594 METD_RS25765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025629 Protein of unknown function DUF4287 PF14117 METD_RS25770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002641|IPR016035|IPR021095 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Protein of unknown function DUF3734 GO:0006629|GO:0008152 G3DSA:3.40.1090.10|PF01734|PF12536|PTHR14226|PTHR14226:SF31|SSF52151 METD_RS25775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013099 Potassium channel domain G3DSA:1.10.287.70|PF07885|SSF81324 METD_RS25785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001949|IPR011538|IPR012336|IPR019554|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 G3DSA:3.40.30.10|PF01257|PF01512|PF10531|PF10589|PS00644|PS00645|PTHR11780|PTHR11780:SF10|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 METD_RS25790 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001041|IPR006478|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017896|IPR017900 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF13187|PF13510|PIRSF036643|PS00198|PS00490|PTHR11615|PTHR11615:SF112|SM00926|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01591 METD_RS25795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PF14667 METD_RS25800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13480|SSF55729 METD_RS25805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR34216|SSF88713 METD_RS25810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.50.2000|PF13692|PTHR12526|SSF53756 METD_RS25820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011050|IPR012334 Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF13229|SSF51126 METD_RS25825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR003856|IPR027417 CobQ/CobB/MinD/ParA nucleotide binding domain|Lipopolysaccharide biosynthesis|P-loop containing nucleoside triphosphate hydrolase GO:0009103|GO:0016020 G3DSA:3.40.50.300|PF01656|PF02706|PTHR32309|PTHR32309:SF13|SSF52540 METD_RS25830 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007016 O-antigen ligase-related PF04932 METD_RS25835 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 METD_RS25840 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF406|SSF51735 METD_RS25845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PTHR24096|PTHR24096:SF249|SSF56801 METD_RS25850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10 METD_RS25855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013094|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 G3DSA:3.40.50.1820|PF07859|PTHR23024|PTHR23024:SF24|SSF53474 METD_RS25860 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.30.930.10|SSF55681 METD_RS25865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|PF00441|PF02771|PIRSF016578|SSF47203|SSF56645 METD_RS25870 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 METD_RS25875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR30466|PTHR30466:SF7|SM00903|SSF50475 METD_RS25880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011766|IPR012000|IPR012001|IPR029035|IPR029061 DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0030976 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF120|SSF52467|SSF52518 METD_RS25890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001544|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF2|SSF56752 METD_RS25895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR40943|PTHR40943:SF1|SSF51182 METD_RS25900 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF12|SSF53383|TIGR01326 METD_RS25905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005697|IPR029062 Class I glutamine amidotransferase-like|Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 G3DSA:3.40.50.880|PD037892|PF04204|PTHR20919|PTHR20919:SF0|SSF52317 METD_RS25910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|PTHR24096:SF248|SSF56801 METD_RS25920 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006626|IPR007016|IPR011050|IPR012334|IPR022441 O-antigen ligase-related|Parallel beta-helix repeat|Parallel beta-helix repeat-2|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF04932|PF13229|SM00710|SSF51126|TIGR03804 METD_RS25925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases PF13704|SSF53448 METD_RS25930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006638|IPR007197|IPR013704|IPR020612|IPR022946|IPR023404|IPR024560 Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal GO:0003824|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01251|PF04055|PF08497|PF11842|PS01278|PTHR32331|PTHR32331:SF3|SM00729|SSF102114|TIGR03904 METD_RS25935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 PF03334|PTHR34703|PTHR34703:SF1|TIGR01300 METD_RS25940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 PF04066|PIRSF028784|PTHR34702|PTHR34702:SF1 METD_RS25945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 PF01899|PIRSF019239|PTHR34584 METD_RS25950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001750|IPR003918 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437|PTHR22773|PTHR22773:SF49 METD_RS25955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PF00420|PTHR34583|PTHR34583:SF1 METD_RS25960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001516|IPR001750|IPR007182|IPR025383 Domain of unknown function DUF4040|NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|Na+/H+ antiporter MnhB subunit-related protein PF00361|PF00662|PF04039|PF13244|PR01434|PTHR22773|PTHR22773:SF46 METD_RS25970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PR00420|PTHR11374|PTHR11374:SF4|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 METD_RS25975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF466|SSF51735 METD_RS25980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|PTHR10366|PTHR10366:SF246|SSF51735 METD_RS25985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 PF03808|PTHR34136|TIGR00696 METD_RS25990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|PTHR12526|SSF53756 METD_RS25995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001031|IPR001242|IPR006162|IPR009081|IPR020806|IPR029058 Alpha/Beta hydrolase fold|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain|Thioesterase GO:0009058|GO:0016788|GO:0031177 G3DSA:1.10.1200.10|G3DSA:3.40.50.1820|PF00550|PF00668|PF00975|PF13745|PS00012|PTHR24095|PTHR24095:SF137|SM00823|SSF47336|SSF52777|SSF53474 METD_RS26000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000873|IPR001242|IPR009081|IPR010071|IPR020806|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PTHR24095|PTHR24095:SF137|SM00823|SSF47336|SSF52777|SSF56801|TIGR01733 METD_RS26010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR20935|SM00855|SSF53254 METD_RS26015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF255|SSF51430 METD_RS26020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR22908|SM00382|SSF52540 METD_RS26035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003148|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.40.50.720|PF00999|PF02254|PTHR16254|PTHR16254:SF6|SSF51735 METD_RS26040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004101|IPR005762|IPR013221|IPR016040|IPR018109 Folylpolyglutamate synthetase, conserved site|Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0004326|GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0009396|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|PS01011|PTHR23135|PTHR23135:SF2|SSF51735|SSF53244|SSF53623|TIGR01087 METD_RS26045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|PTHR22926|PTHR22926:SF5|TIGR00445 METD_RS26050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF3|SSF53244|SSF53623|SSF63418|TIGR01143 METD_RS26055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085 METD_RS26060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF1|SSF56519|SSF56601 METD_RS26070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 METD_RS26075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001357|IPR001679|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840|IPR018239|IPR033136 BRCT domain|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, active site|NAD-dependent DNA ligase, adenylation|NAD-dependent DNA ligase, conserved site|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03119|PF03120|PF12826|PIRSF001604|PS01055|PS01056|PTHR23389|PTHR23389:SF9|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 METD_RS26085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 METD_RS26090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00584|PTHR10584|PTHR10584:SF153|SSF53613 METD_RS26095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|SSF54534 METD_RS26105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003673|IPR023606 CoA-transferase family III|CoA-transferase family III domain GO:0003824 G3DSA:3.30.1540.10|G3DSA:3.40.50.10540|PF02515|PTHR24023|PTHR24023:SF593|SSF89796 METD_RS26110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001753|IPR014748|IPR029045 ClpP/crotonase-like domain|Crontonase, C-terminal|Crotonase superfamily GO:0003824|GO:0008152 G3DSA:1.10.12.10|G3DSA:3.90.226.10|PF00378|PTHR11941|PTHR11941:SF71|SSF52096 METD_RS26115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PR00035|PTHR11751|PTHR11751:SF384|SM00345|SM00895|SSF46785|SSF48008 METD_RS26120 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001597|IPR015421|IPR015422|IPR015424|IPR023603 Aromatic amino acid beta-eliminating lyase/threonine aldolase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Threonine aldolase GO:0003824|GO:0006520|GO:0016829 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01212|PIRSF017617|PTHR10289|PTHR10289:SF5|SSF53383 METD_RS26125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025419 Domain of unknown function DUF4142 PF13628 METD_RS26130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006336|IPR011793 Glutamate--cysteine ligase, GCS2|Putative glutamate--cysteine ligase YbdK GO:0004357|GO:0016879|GO:0042398 MF_01609|PF04107|PTHR36510|PTHR36510:SF1|SSF55931|TIGR02050 METD_RS26140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001563|IPR029058 Alpha/Beta hydrolase fold|Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 G3DSA:3.40.50.1820|PF00450|PTHR11802|SSF53474 METD_RS26145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 G3DSA:3.40.50.10110|PF04364|SSF102400 METD_RS26155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005494|IPR016185 Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain PF03738|PTHR30094|PTHR30094:SF5|SSF52440|SSF56059 METD_RS26160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009576 Biofilm formation YgiB PF06693 METD_RS26165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007140 Protein of unknown function DUF350 PF03994|PTHR40043|PTHR40043:SF1 METD_RS26170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 METD_RS26175 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 METD_RS26185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|SSF52499 METD_RS26195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 METD_RS26200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF13145|PF13624|PTHR10657|PTHR10657:SF13|SSF109998|SSF54534 METD_RS26205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|PTHR11236:SF9|SSF56322|TIGR00564 METD_RS26210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS26215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 METD_RS26220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|PTHR11922|PTHR11922:SF5|SSF47648|SSF52418|TIGR01245 METD_RS26225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00134_B|PF00218|PS00614|PTHR22854|PTHR22854:SF2|SSF51366 METD_RS26230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002820|IPR023045|IPR023046 Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|PTHR22960|SSF55040|TIGR00581 METD_RS26235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001453|IPR005110|IPR005111 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882 METD_RS26240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009387 Toxin HigB-2 PF06296|PIRSF039032 METD_RS26245 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36511|SM00530|SSF47413 METD_RS26250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|PTHR30272|SSF54637|TIGR01750 METD_RS26255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 METD_RS26260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010415 Protein of unknown function DUF1009 PF06230|PTHR39962|PTHR39962:SF1 METD_RS26265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|MF_00392|PF02684|PTHR30372|PTHR30372:SF0|SSF53756|TIGR00215 METD_RS26270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003791 Protein of unknown function UPF0178 MF_00489|PF02639|PTHR35146|PTHR35146:SF1 METD_RS26275 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|SSF48256|TIGR01798 METD_RS26280 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 METD_RS26285 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004477|IPR025405 ComEC/Rec2-related protein|Domain of unknown function DUF4131 PF03772|PF13567|PTHR30619|PTHR30619:SF2|TIGR00360 METD_RS26290 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|PTHR33516|PTHR33516:SF2|SSF46785|SSF51306|TIGR00498 METD_RS26295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009642 Protein of unknown function DUF1236 PF06823 METD_RS26300 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00217|PTHR23508|PTHR23508:SF12|SSF103473 METD_RS26305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008567|IPR013785 3-keto-5-aminohexanoate cleavage enzyme|Aldolase-type TIM barrel GO:0003824|GO:0016740|GO:0019475 G3DSA:3.20.20.70|PF05853|PTHR37418|PTHR37418:SF2 METD_RS26310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001804|IPR011829|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain|Tartrate dehydrogenase GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF37|SM01329|SSF53659|TIGR02089 METD_RS26320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001395|IPR023210 Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain G3DSA:3.20.20.100|PF00248|PTHR11732|PTHR11732:SF275|SSF51430 METD_RS26330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089|IPR004090|IPR032255 Chemotaxis methyl-accepting receptor|HAMP domain|Helical bimodular sensor domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PR00260|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SM01358|SSF58104 METD_RS26335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 METD_RS26340 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011727 Conserved hypothetical protein CHP02117 PF09601 METD_RS26345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 METD_RS26350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR019632 Protein of unknown function DUF2497 PF10691 METD_RS26355 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF3|SSF56954|TIGR01844 METD_RS26360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|PF01135|PTHR11579|PTHR11579:SF0|SSF53335 METD_RS26400 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027843|IPR032710 Domain of unknown function DUF4440|NTF2-like domain G3DSA:3.10.450.50|PF14534|SSF54427 METD_RS26415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000631|IPR029056 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Ribokinase-like GO:0052855 G3DSA:3.40.1190.20|MF_01965|PF01256|PTHR12592|PTHR12592:SF0|SSF53613|TIGR00196 METD_RS26445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005673|IPR024370 ABC transporter, phosphate-binding protein PstS|PBP domain GO:0035435|GO:0042301|GO:0043190 G3DSA:3.40.190.10|PF12849|PIRSF002756|PTHR30570|PTHR30570:SF0|SSF53850|TIGR00975 METD_RS26450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR011864 ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF1|SSF161098|TIGR02138 METD_RS26455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF0|SSF161098|TIGR00974 METD_RS26460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF560|SM00382|SSF52540|TIGR00972 METD_RS26465 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 METD_RS26470 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR001867|IPR011006|IPR011879|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF576|SM00448|SM00862|SSF46894|SSF52172|TIGR02154 METD_RS26475 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011681 GcrA cell cycle regulator PF07750 METD_RS26480 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR015000 Protein of unknown function DUF1849 PF08904 METD_RS26485 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001126|IPR017961|IPR022880 DNA polymerase IV|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11799|PTHR11076|SSF100879|SSF56672 METD_RS26490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PF02571|PTHR36925|TIGR00715 METD_RS26495 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002586|IPR004459|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyric acid synthase CobQ|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00028|PF01656|PF07685|PTHR21343|PTHR21343:SF1|SSF52317|SSF52540|TIGR00313 METD_RS26500 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 MF_00024|PF03186|PTHR34308|PTHR34308:SF1|TIGR00380 METD_RS26505 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004838|IPR004839|IPR005860|IPR015421|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|L-threonine-O-3-phosphate decarboxylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0009058|GO:0009236|GO:0030170 G3DSA:3.40.640.10|PF00155|PS00105|PTHR11751|PTHR11751:SF3|SSF53383|TIGR01140 METD_RS26510 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF79|SSF103473 METD_RS26520 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007956 Malonyl-CoA decarboxylase GO:0006633|GO:0050080 PF05292|PTHR28641|PTHR28641:SF2 METD_RS26525 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 METD_RS26530 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002347|IPR011294|IPR016040|IPR020904 3-hydroxybutyrate dehydrogenase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0003858|GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735|TIGR01963 METD_RS26535 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|PTHR22855|PTHR22855:SF42|SSF52096|TIGR00513 METD_RS26540 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014903 Protein of unknown function DUF1796 PF08795 METD_RS26545 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PTHR36699|SSF141523 METD_RS26550 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 METD_RS26555 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|SSF81301 METD_RS26560 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007842 HEPN domain G3DSA:1.20.120.330|PF05168|PTHR36565|PTHR36565:SF1 METD_RS26565 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR011757|IPR011970|IPR023346|IPR031304 Lysozyme-like domain|Lytic murein transglycosylase|Lytic transglycosylase MltB|Peptidoglycan binding-like|Transglycosylase SLT domain 2 G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF13406|PTHR30163|PTHR30163:SF4|SSF47090|SSF53955|TIGR02283 METD_RS26570 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 METD_RS26575 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|PTHR32332|PTHR32332:SF12|SSF51412 METD_RS26580 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000462|IPR012616 CDP-alcohol phosphatidyltransferase|CDP-alcohol phosphatidyltransferase, C-terminal GO:0008654|GO:0016020|GO:0016780 PF01066|PF08009|PS00379|PTHR15362|PTHR15362:SF2 METD_RS26585 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003817|IPR033175 Phosphatidylserine decarboxylase, archaeal-type|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00664|PF02666|PTHR35809|TIGR00164 METD_RS26590 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF250|SM00382|SSF52540|SSF90123 METD_RS26595 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR018392 LysM domain G3DSA:3.10.350.10|PF01476|PTHR34700|PTHR34700:SF1|SM00257 METD_RS26600 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF0|SSF102405|TIGR00730 METD_RS26605 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PF13578|SSF53335 METD_RS26610 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 METD_RS26620 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010292 Uncharacterised protein family CreA PF05981|PIRSF003174|PTHR37952|PTHR37952:SF2 METD_RS26625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021293 Protein of unknown function DUF2865 PF11064 METD_RS26630 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30128|SSF103088|SSF81995 METD_RS26635 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005829|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PS00216|PTHR23501|PTHR23501:SF11|SSF103473 METD_RS26640 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009725|IPR028973|IPR029068 3-demethylubiquinone-9 3-methyltransferase|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Predicted 3-demethylubiquinone-9 3-methyltransferase G3DSA:3.10.180.10|PF06983|PIRSF021700|PTHR33990|PTHR33990:SF2|SSF54593 METD_RS26645 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF835|SSF53335 METD_RS26650 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 METD_RS26655 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PF13533|PTHR30367|PTHR30367:SF5|SSF111369|TIGR01730 METD_RS26660 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR012451 Protein of unknown function DUF1656 PF07869 METD_RS26665 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 PF04632|PTHR30509|PTHR30509:SF1 METD_RS26670 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025597 Protein of unknown function DUF4345 PF14248 METD_RS26685 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|PTHR11260:SF178|SSF47616|SSF52833 METD_RS26690 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007195|IPR011659|IPR014167|IPR015943 Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0017038|GO:0042597 G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|PTHR36842|SSF52964|SSF69304|TIGR02800 METD_RS26695 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 G3DSA:3.30.1150.10|SSF74653|TIGR02794 METD_RS26700 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 METD_RS26705 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0006810|GO:0008565|GO:0015031|GO:0016020|GO:0016021 PF01618|PTHR30625|PTHR30625:SF3|TIGR02796 METD_RS26710 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|PTHR32089:SF56|SM00283|SSF58104 METD_RS26715 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006683|IPR006684|IPR014166|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain|Tol-Pal system-associated acyl-CoA thioesterase GO:0016787|GO:0016790 G3DSA:3.10.129.10|PF03061|PIRSF003230|PTHR31793|PTHR31793:SF9|SSF54637|TIGR00051|TIGR02799 METD_RS26720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025419 Domain of unknown function DUF4142 PF13628 METD_RS26725 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 METD_RS26730 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|PTHR41533|PTHR41533:SF1|SSF141523|SSF47090 METD_RS26735 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002177|IPR008331|IPR009078|IPR012347 DNA-binding protein Dps|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0006950|GO:0008199|GO:0055114 G3DSA:1.20.1260.10|PF00210|PIRSF005900|PR01346|PTHR30295|PTHR30295:SF6|SSF47240 METD_RS26740 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000182|IPR003781|IPR016040|IPR016102|IPR016181|IPR032875 Acyl-CoA N-acyltransferase|CoA-binding|GNAT domain|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0008080|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.40.630.30|PF13302|PF13380|PF13549|PF13607|PTHR11117|PTHR11117:SF8|SM00881|SSF51735|SSF52210|SSF55729|SSF56059 METD_RS26745 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|PTHR22789|PTHR22789:SF0|SM01007|SSF53639 METD_RS26750 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 METD_RS26755 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR007560|IPR011335|IPR011856 Restriction endonuclease type II-like|Restriction endonuclease type IV, Mrr|tRNA endonuclease-like domain GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0009307 G3DSA:3.40.1350.10|PF04471|PTHR30015|SSF52980 METD_RS26760 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219|PTHR34219:SF1 METD_RS26765 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 METD_RS26770 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PTHR11920|PTHR11920:SF341|SM00044|SSF55073 METD_RS26775 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001129|IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain|Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein G3DSA:1.20.120.550|PF01124|PTHR35814|SSF161084 METD_RS26780 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 METD_RS26795 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|SSF54849|TIGR02348 METD_RS26800 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129 METD_RS26805 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|PTHR21535|PTHR21535:SF37|SSF143865|SSF144083 METD_RS26810 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508|PTHR33508:SF1|TIGR00427 METD_RS26815 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PF14667 METD_RS26820 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006094|IPR016164|IPR016166|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.465.10|PF01565|PTHR11748|PTHR11748:SF1|SSF55103|SSF56176 METD_RS26825 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101|PTHR11101:SF61 METD_RS26845 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000447|IPR006076|IPR023753|IPR031656 Alpha-glycerophosphate oxidase, C-terminal|FAD dependent oxidoreductase|FAD-dependent glycerol-3-phosphate dehydrogenase|FAD/NAD(P)-binding domain GO:0004368|GO:0006072|GO:0009331|GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PF16901|PR01001|PS00977|PS00978|PTHR11985|PTHR11985:SF1|SSF51905 METD_RS26850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|PTHR12526|PTHR12526:SF387|SSF51182|SSF53448|TIGR01479 METD_RS26855 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006098|IPR006099|IPR006158|IPR006159|IPR014348|IPR016176 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-dependent enzyme, catalytic|Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain|Methylmalonyl-CoA mutase, C-terminal|Methylmalonyl-CoA mutase, alpha chain, catalytic|Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0003824|GO:0004494|GO:0008152|GO:0016853|GO:0016866|GO:0031419|GO:0046872 G3DSA:3.20.20.240|G3DSA:3.40.50.280|PF01642|PF02310|PS00544|PTHR23408|PTHR23408:SF1|SSF51703|SSF52242|TIGR00640|TIGR00641 METD_RS26865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008535 Protein of unknown function DUF817 PF05675|PIRSF009141 METD_RS26875 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF76|SM00228|SSF50156|SSF50494 METD_RS26880 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PTHR12763|PTHR12763:SF17|SM00271|SSF46565 METD_RS26885 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001967|IPR007730|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal|Sporulation-related domain GO:0006508|GO:0009002|GO:0042834 G3DSA:3.30.70.1070|G3DSA:3.40.710.10|PF00768|PF05036|PR00725|PTHR21581|PTHR21581:SF3|SSF110997|SSF56601 METD_RS26890 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|PTHR33473|SSF54736 METD_RS26895 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF111|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 METD_RS26905 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001917|IPR004839|IPR010961|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003824|GO:0003870|GO:0008152|GO:0009058|GO:0016740|GO:0030170|GO:0033014 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00599|PTHR13693|PTHR13693:SF57|SSF53383|TIGR01821 METD_RS26910 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017496 Photosynthetic complex assembly protein 2, putative PF12291|TIGR03055 METD_RS26915 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003251|IPR008434|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase|Rubrerythrin GO:0015979|GO:0015995|GO:0016491|GO:0046872|GO:0048529|GO:0055114 G3DSA:1.20.1260.10|MF_01840|PF02915|PTHR31053|PTHR31053:SF1|SSF47240|TIGR02029 METD_RS26925 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR017495 Putative photosynthetic complex assembly protein TIGR03054 METD_RS26930 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005182 Domain of unknown function DUF304 PF03703 METD_RS26935 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005652|IPR011033|IPR014747|IPR015810|IPR027275 Bacterial photosynthetic reaction centre, H-chain, C-terminal|PRC-barrel domain|PRC-barrel-like|Photosynthetic reaction centre, H subunit|Photosynthetic reaction centre, H subunit, N-terminal GO:0019684|GO:0030077|GO:0045156 G3DSA:3.90.50.10|G3DSA:4.10.540.10|PF03967|PF05239|SSF50346|SSF81490|TIGR01150 METD_RS26940 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004896|IPR020846|IPR026036 Major facilitator superfamily domain|PucC protein|PucC-related G3DSA:1.20.1250.20|PF03209|PIRSF016565|PTHR23538|SSF103473 METD_RS26945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010251|IPR010940|IPR029063 Magnesium-protoporphyrin IX methyltransferase|Magnesium-protoporphyrin IX methyltransferase, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0015995|GO:0046406 G3DSA:3.40.50.150|PF03602|PF07109|PTHR10108|PTHR10108:SF721|SSF53335|TIGR02021 METD_RS26950 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000392|IPR005971|IPR027417|IPR030655 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein|NifH/chlL conserved site|Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015995|GO:0016491|GO:0016730|GO:0019685|GO:0046148|GO:0055114 G3DSA:3.40.50.300|MF_00355|PF00142|PIRSF000363|PR00091|PS00692|PS00746|PTHR13696|PTHR13696:SF74|SSF52540|TIGR01281 METD_RS26955 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003672|IPR011771|IPR022571 CobN/magnesium chelatase|Magnesium chelatase, subunit H, N-terminal|Magnesium-chelatase, subunit H GO:0009058|GO:0015995|GO:0016851 PF02514|PF11965|PTHR23304|PTHR23304:SF109|TIGR02025 METD_RS26960 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000510|IPR005969|IPR013580|IPR016209 Light-independent protochlorophyllide reductase, B subunit|Nitrogenase/oxidoreductase, component 1|Proto-chlorophyllide/chlorophyllide reductase, C-terminal|Protochlorophyllide reductase, ChlB, light independent GO:0015979|GO:0015995|GO:0016491|GO:0016730|GO:0019685|GO:0046148|GO:0055114 G3DSA:3.40.50.1980|MF_00353|PF00148|PF08369|PIRSF000163|PTHR33712|PTHR33712:SF5|SSF53807|TIGR01278 METD_RS26965 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000510|IPR005970 Light-independent protochlorophyllide reductase, N subunit|Nitrogenase/oxidoreductase, component 1 GO:0015995|GO:0016491|GO:0016730|GO:0019685|GO:0055114 G3DSA:3.40.50.1980|MF_00352|PF00148|PIRSF000162|PTHR39429|PTHR39429:SF1|SSF53807|TIGR01279 METD_RS26970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009905 2-vinyl bacteriochlorophyllide hydratase GO:0016836|GO:0019685|GO:0030494 PF07284|TIGR02020 METD_RS26975 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 G3DSA:3.40.50.280|PF02310|SSF52242 METD_RS26980 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR002197|IPR009057|IPR011785 DNA binding HTH domain, Fis-type|Homeodomain-like|PAS domain|Transcription regulator PpsR GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.30.450.20|PF02954|PF13188|PR01590|PTHR32071|SM00091|SSF46689|SSF55785|TIGR02040 METD_RS26985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000537|IPR006372 Bacteriochlorophyll/chlorophyll synthetase|UbiA prenyltransferase family GO:0004659|GO:0016021 PF01040|PTHR11048|PTHR11048:SF32|TIGR01476 METD_RS26990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004896|IPR020846|IPR026036 Major facilitator superfamily domain|PucC protein|PucC-related G3DSA:1.20.1250.20|PF03209|PIRSF016565|PTHR23538|SSF103473 METD_RS26995 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002938|IPR010253|IPR011777|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Geranylgeranyl reductase family|Geranylgeranyl reductase, plant/prokaryotic GO:0015979|GO:0015995|GO:0016491|GO:0016628|GO:0045550|GO:0055114|GO:0071949 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01494|PF03486|PR00420|PTHR10617|PTHR10617:SF101|SSF51905|TIGR02023|TIGR02032 METD_RS27000 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004307 TspO/MBR-related protein GO:0016021 PF03073|PIRSF005859|PTHR10057 METD_RS27010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PF13442|PTHR35008|PTHR35008:SF5|SSF46626 METD_RS27015 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004849|IPR006114|IPR006115|IPR006183|IPR008927|IPR013328|IPR016040 6-phosphogluconate dehydrogenase|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, YqeC-type|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0006098|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF00393|PF03446|PR00076|PTHR11811|PTHR11811:SF28|SM01350|SSF48179|SSF51735|TIGR00872 METD_RS27020 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005900|IPR006148 6-phosphogluconolactonase, DevB-type|Glucosamine/galactosamine-6-phosphate isomerase GO:0005975|GO:0006098|GO:0017057 G3DSA:3.40.50.1360|PF01182|PTHR11054|SSF100950|TIGR01198 METD_RS27030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 METD_RS27035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|PTHR30433|PTHR30433:SF2 METD_RS27040 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PTHR30329|PTHR30329:SF2|SSF103088 METD_RS27045 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014044 CAP domain G3DSA:3.40.33.10|PF00188|PTHR31157|SSF55797 METD_RS27050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006685|IPR006686|IPR010920|IPR011014|IPR011066|IPR022249 Domain of unknown function DUF3772|LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, conserved site|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12607|PS01246|PTHR30347|PTHR30347:SF3|SSF50182|SSF82689|SSF82861 METD_RS27055 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003615|IPR029471 HNH endonuclease 5|HNH nuclease PF14279|PTHR33877|PTHR33877:SF2|SM00507 METD_RS27065 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|PTHR34001|SSF56925 METD_RS27070 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 METD_RS27075 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011250|IPR027385 Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13505|SSF56925 METD_RS27080 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF15|SSF53738|SSF55957|TIGR01455 METD_RS27085 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 METD_RS27090 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 METD_RS27095 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011063|IPR012094|IPR012795|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PTHR11807|PTHR11807:SF2|SSF52402|TIGR02432 METD_RS27100 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011990|IPR014162|IPR019734|IPR032519 Tetratricopeptide repeat|Tetratricopeptide-like helical domain|Tol-Pal system, YbgF|YbgF, trimerisation domain GO:0005515|GO:0070206 G3DSA:1.25.40.10|PF13174|PF13432|PF16331|SSF48452|TIGR02795 METD_RS27105 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR006664|IPR006665|IPR006690|IPR014169 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|PTHR30128|PTHR30128:SF18|SSF103088|TIGR02802 METD_RS27110 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|SSF47226 METD_RS27115 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF481|SM00448|SSF52172 METD_RS27125 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR014982 GSCFA PF08885 METD_RS27130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|PTHR11557|SSF53850|SSF54782|TIGR00212 METD_RS27140 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF8|SSF56235|TIGR00066 METD_RS27145 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR10587|PTHR10587:SF72|SSF88713 METD_RS27150 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851|IPR003439|IPR003593|IPR017871|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, permease|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PF02653|PF12399|PS00211|PTHR24220|PTHR24220:SF358|SM00382|SSF52540 METD_RS27155 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF371 METD_RS27160 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000709|IPR028081|IPR028082 Leu/Ile/Val-binding protein|Leucine-binding protein domain|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13458|PR00337|PTHR30483|PTHR30483:SF6|SSF53822 METD_RS27165 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 METD_RS27170 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000524|IPR008920|IPR011711|IPR011991 GntR, C-terminal|Transcription regulator FadR/GntR, C-terminal|Transcription regulator HTH, GntR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:1.20.120.530|PF00392|PF07729|PTHR11751|SM00345|SM00895|SSF46785|SSF48008 METD_RS27185 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001387|IPR001610|IPR010982|IPR013655 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|PAC motif|PAS domain|PAS fold-3 GO:0003677|GO:0005515|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.30.450.20|PF08447|PTHR24423|PTHR24423:SF383|SM00086|SM00530|SSF47413|SSF55785|TIGR00229 METD_RS27190 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11662|PTHR11662:SF3|SSF103473 METD_RS27195 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009078|IPR010287|IPR012347 Domain of unknown function DUF892|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF05974|PTHR30565|SSF47240 METD_RS27200 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696|PTHR32057 METD_RS27205 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 METD_RS27210 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 METD_RS27215 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|PTHR30239|SSF55021|TIGR00119 METD_RS27220 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF02798|PTHR11260|PTHR11260:SF285|SSF47616|SSF52833 METD_RS27225 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001962|IPR006426|IPR014729|IPR017535|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase family amidotransferase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536|TIGR03104 METD_RS27230 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR026869|IPR029055 Nucleophile aminohydrolases, N-terminal|Putative glutamine amidotransferase type 2 G3DSA:3.60.20.10|PF13230|PTHR11907|PTHR11907:SF1|SSF56235 METD_RS27235 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|PTHR30173:SF6|SSF88659|SSF88946|TIGR02937 METD_RS27240 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 METD_RS27250 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR003594|IPR011006|IPR011495 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF07568|PF13581|PTHR26402|SM00387|SM00448|SSF52172|SSF55874 METD_RS27255 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 METD_RS27260 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR005330|IPR013655 Histidine kinase-like ATPase, C-terminal domain|MHYT domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF03707|PF08447|PR00344|PTHR24423|SM00086|SM00387|SSF47384|SSF55785|SSF55874|TIGR00229 METD_RS27265 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 METD_RS27270 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000792|IPR001789|IPR003018|IPR011006|IPR011991|IPR013655|IPR016032|IPR029016 CheY-like superfamily|GAF domain|GAF domain-like|PAS domain|PAS fold-3|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0005515|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.40.50.2300|PF00072|PF00196|PF01590|PF08447|PR00038|PTHR26402|PTHR26402:SF613|SM00065|SM00091|SM00421|SM00448|SSF46894|SSF52172|SSF55781|SSF55785|TIGR00229 METD_RS27305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 METD_RS27455 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR010074|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine subunit PurL|PurM-like, N-terminal domain GO:0004642|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00420|PF00586|PF02769|PTHR10099|PTHR10099:SF2|SSF55326|SSF56042|TIGR01736 METD_RS27625 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249 METD_RS27720 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF53756 METD_RS27785 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:1.20.1580.10|G3DSA:3.40.50.300|PTHR32282|PTHR32282:SF4|SSF52540 METD_RS27850 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011031 Multihaem cytochrome G3DSA:3.90.10.10|PTHR39425|PTHR39425:SF1|SSF48695 METD_RS27865 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.50.740|SSF53706 METD_RS27945 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic G3DSA:3.40.190.10 METD_RS27970 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR029056 Ribokinase-like G3DSA:3.40.1190.20 METD_RS27985 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic SSF53756 METD_RS27990 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain PF13579|SSF53756 METD_RS28010 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|PF16363|PTHR10366|PTHR10366:SF423|SSF51735 METD_RS28030 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|PTHR32552|PTHR32552:SF35|SSF53098 METD_RS28035 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 PF01548 METD_RS28050 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF00308|PF08299|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 METD_RS28060 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001238|IPR018078|IPR027417 DNA-binding, RecF|DNA-binding, RecF, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PS00618|SSF52540 METD_RS28130 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR001610|IPR003661 PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 G3DSA:1.10.287.130|G3DSA:3.30.450.20|PF00512|PTHR24423|PTHR24423:SF438|SM00086|SM00388|SSF47384|SSF55785 METD_RS28295 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001471|IPR016177 AP2/ERF domain|DNA-binding domain GO:0003677|GO:0003700|GO:0006355 G3DSA:3.30.730.10|SSF54060|SSF54171 METD_RS28305 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.40.367.20|PF02685|SSF53067 METD_RS28310 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.30.420.40|PF02685|SSF53067 METD_RS28315 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic PF13358 METD_RS28320 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PTHR32089|PTHR32089:SF40|SM00283|SM00304|SSF58104 METD_RS28330 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584 Integrase, catalytic core GO:0015074 PF13683 METD_RS28335 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR021880 Protein of unknown function DUF3489 PF11994 METD_RS28345 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PF01434|PTHR23076|SSF140990 METD_RS28350 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 PF01434|SSF140990 METD_RS28360 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00042|PTHR24567|PTHR24567:SF28|SM00419|SSF46785|SSF51206 METD_RS28365 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR022550 Nucleotidyltransferase 8 PF12281 METD_RS28390 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001584|IPR012337|IPR015378 Integrase, catalytic core|Ribonuclease H-like domain|Transposase-like, Mu, C-terminal GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PF09299|SSF53098 METD_RS28395 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13401|SSF52540 METD_RS28410 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001091|IPR001387|IPR002052|IPR002941|IPR010982|IPR029063 Cro/C1-type helix-turn-helix domain|DNA methylase N-4/N-6|DNA methylase, N-6 adenine-specific, conserved site|Lambda repressor-like, DNA-binding domain|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259|GO:0043565 G3DSA:1.10.260.40|G3DSA:3.40.50.150|PF01555|PR00508|PS00092|PTHR13370|SM00530|SSF47413|SSF53335 METD_RS28415 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SSF56349 METD_RS28420 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR005039|IPR014054 Antirepressor protein, C-terminal|Bacteriophage regulatory protein, Rha family GO:0003677 PF03374|PF09669|TIGR02681 METD_RS28430 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PTHR11920|PTHR11920:SF257|SM00044|SSF55073 METD_RS28435 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR000014|IPR000160|IPR001633|IPR003660|IPR013656|IPR029787 EAL domain|GGDEF domain|HAMP domain|Nucleotide cyclase|PAS domain|PAS fold-4 GO:0004871|GO:0007165|GO:0016021 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00672|PF00990|PF08448|PTHR33121|PTHR33121:SF13|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 METD_RS28445 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.40.367.20|PF02685|SSF53067 METD_RS28450 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.30.420.40|PF02685|SSF53067 METD_RS28460 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13177|PTHR11669|PTHR11669:SF8|SSF52540 METD_RS28490 /var/genomes/g2d_mirror/Methylobacterium_extorquens_DM4/ASM8354v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PTHR40394|PTHR40394:SF2|SSF46626