MRAD2831_RS32025	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS32025	SM00760	Bacterial dnaA protein helix-turn-helix domain
MRAD2831_RS32040	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS32055	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS32065	SM00479	MRAD2831_RS32065
MRAD2831_RS32070	SM00292	breast cancer carboxy-terminal domain
MRAD2831_RS32070	SM00532	Ligase N family
MRAD2831_RS32240	SM00448	cheY-homologous receiver domain
MRAD2831_RS32300	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS32305	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS32330	SM00853	MutL C terminal dimerisation domain
MRAD2831_RS32330	SM01340	MRAD2831_RS32330
MRAD2831_RS32335	SM00822	MRAD2831_RS32335
MRAD2831_RS32355	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS32370	SM00363	S4 RNA-binding domain
MRAD2831_RS32415	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS32445	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS32445	SM01240	MRAD2831_RS32445
MRAD2831_RS32475	SM00320	WD40 repeats
MRAD2831_RS32485	SM00448	cheY-homologous receiver domain
MRAD2831_RS32510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS32510	SM00245	tail specific protease
MRAD2831_RS32540	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
MRAD2831_RS32570	SM00867	YceI-like domain 
MRAD2831_RS32590	SM00855	Phosphoglycerate mutase family
MRAD2831_RS32625	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MRAD2831_RS32665	SM00028	Tetratricopeptide repeats
MRAD2831_RS32695	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS32700	SM00937	MRAD2831_RS32700
MRAD2831_RS32730	SM00448	cheY-homologous receiver domain
MRAD2831_RS32735	SM00357	Cold shock protein domain
MRAD2831_RS32785	SM00671	Sel1-like repeats.
MRAD2831_RS32815	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MRAD2831_RS32840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS32840	SM00895	MRAD2831_RS32840
MRAD2831_RS32870	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MRAD2831_RS32990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS32990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS32995	SM00911	HWE histidine kinase
MRAD2831_RS33000	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS33000	SM00091	PAS domain
MRAD2831_RS33000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS33015	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS33030	SM00448	cheY-homologous receiver domain
MRAD2831_RS33030	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS33035	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33035	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS33070	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS33070	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS33070	SM00091	PAS domain
MRAD2831_RS33070	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33070	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS33070	SM00448	cheY-homologous receiver domain
MRAD2831_RS33075	SM00448	cheY-homologous receiver domain
MRAD2831_RS33080	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS33080	SM00448	cheY-homologous receiver domain
MRAD2831_RS33090	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS33090	SM00267	diguanylate cyclase
MRAD2831_RS33090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS33105	SM00887	Ethylbenzene dehydrogenase
MRAD2831_RS33120	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33120	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS33125	SM00448	cheY-homologous receiver domain
MRAD2831_RS33125	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS33220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS33235	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS33265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS33335	SM00903	Flavin reductase like domain
MRAD2831_RS33375	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS33375	SM00448	cheY-homologous receiver domain
MRAD2831_RS33400	SM00014	Acid phosphatase homologues
MRAD2831_RS33430	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS33460	SM01091	Transporter associated domain
MRAD2831_RS33465	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS33470	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS33560	SM00642	Alpha-amylase domain
MRAD2831_RS33570	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS33580	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33580	SM00433	TopoisomeraseII
MRAD2831_RS33585	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS33585	SM00448	cheY-homologous receiver domain
MRAD2831_RS33590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS33590	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33605	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS33605	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS33615	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS33615	SM01080	MRAD2831_RS33615
MRAD2831_RS33625	SM00448	cheY-homologous receiver domain
MRAD2831_RS33625	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS33655	SM00822	MRAD2831_RS33655
MRAD2831_RS33660	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS33670	SM00829	Enoylreductase
MRAD2831_RS33675	SM00829	Enoylreductase
MRAD2831_RS33680	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS33680	SM00895	MRAD2831_RS33680
MRAD2831_RS33690	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS33690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS33755	SM00882	Coenzyme A transferase
MRAD2831_RS33770	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS33780	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS33785	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS33810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS33820	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33820	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS33825	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS33825	SM00448	cheY-homologous receiver domain
MRAD2831_RS33835	SM00911	HWE histidine kinase
MRAD2831_RS33910	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS33920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS33920	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS33925	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS33925	SM00267	diguanylate cyclase
MRAD2831_RS33930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS33970	SM01034	Sensors of blue-light using FAD
MRAD2831_RS33980	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS33980	SM00091	PAS domain
MRAD2831_RS33980	SM00387	Histidine kinase-like ATPases
MRAD2831_RS33980	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS33985	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS33985	SM00448	cheY-homologous receiver domain
MRAD2831_RS33990	SM00448	cheY-homologous receiver domain
MRAD2831_RS34025	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS34025	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS34040	SM00831	Cation transporter/ATPase, N-terminus
MRAD2831_RS34055	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS34055	SM00245	tail specific protease
MRAD2831_RS34060	SM00831	Cation transporter/ATPase, N-terminus
MRAD2831_RS34070	SM00749	bacterial OsmY and nodulation domain
MRAD2831_RS34110	SM00749	bacterial OsmY and nodulation domain
MRAD2831_RS34140	SM00749	bacterial OsmY and nodulation domain
MRAD2831_RS34205	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
MRAD2831_RS34295	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS34350	SM01207	MRAD2831_RS34350
MRAD2831_RS34360	SM00732	Likely ribonuclease with RNase H fold.
MRAD2831_RS34365	SM00860	SMI1 / KNR4 family
MRAD2831_RS34390	SM00845	GatB domain
MRAD2831_RS34425	SM00562	MRAD2831_RS34425
MRAD2831_RS34465	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS34465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS34475	SM00919	Malic enzyme, NAD binding domain
MRAD2831_RS34475	SM01274	MRAD2831_RS34475
MRAD2831_RS34515	SM00474	3'-5' exonuclease
MRAD2831_RS34525	SM00564	beta-propeller repeat
MRAD2831_RS34535	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS34545	SM00905	Dihydroneopterin aldolase
MRAD2831_RS34585	SM00448	cheY-homologous receiver domain
MRAD2831_RS34585	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS34590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS34590	SM00387	Histidine kinase-like ATPases
MRAD2831_RS34590	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS34665	SM00883	Chaperonin 10 Kd subunit
MRAD2831_RS34675	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS34675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS34685	SM00487	DEAD-like helicases superfamily
MRAD2831_RS34685	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS34740	SM00091	PAS domain
MRAD2831_RS34740	SM00387	Histidine kinase-like ATPases
MRAD2831_RS34740	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS34745	SM00978	MRAD2831_RS34745
MRAD2831_RS34750	SM00650	Ribosomal RNA adenine dimethylases
MRAD2831_RS34795	SM01324	MRAD2831_RS34795
MRAD2831_RS34825	SM00851	MGS-like domain
MRAD2831_RS34825	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
MRAD2831_RS34840	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
MRAD2831_RS34850	SM00400	zinc finger
MRAD2831_RS34850	SM00493	MRAD2831_RS34850
MRAD2831_RS34900	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS34965	SM00487	DEAD-like helicases superfamily
MRAD2831_RS34965	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS34965	SM00847	Helicase associated domain (HA2)  Add an annotation
MRAD2831_RS35005	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35060	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35075	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS35095	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
MRAD2831_RS35095	SM00534	ATPase domain of DNA mismatch repair MUTS family
MRAD2831_RS35100	SM00448	cheY-homologous receiver domain
MRAD2831_RS35105	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS35105	SM00387	Histidine kinase-like ATPases
MRAD2831_RS35150	SM01060	MRAD2831_RS35150
MRAD2831_RS35170	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS35170	SM01091	Transporter associated domain
MRAD2831_RS35185	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS35195	SM00563	Phosphate acyltransferases
MRAD2831_RS35210	SM00932	Scaffold protein Nfu/NifU N terminal
MRAD2831_RS35280	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35285	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35295	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS35370	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS35450	SM00448	cheY-homologous receiver domain
MRAD2831_RS35475	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35510	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35535	SM00852	Probable molybdopterin binding domain
MRAD2831_RS35585	SM00478	endonuclease III
MRAD2831_RS35610	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35635	SM00155	Phospholipase D. Active site motifs.
MRAD2831_RS35660	SM00986	Uracil DNA glycosylase superfamily
MRAD2831_RS35660	SM00987	UreE urease accessory protein, C-terminal domain 
MRAD2831_RS35675	SM00957	SecA DEAD-like domain
MRAD2831_RS35675	SM00958	SecA preprotein cross-linking domain
MRAD2831_RS35695	SM00996	S-adenosyl-L-homocysteine hydrolase
MRAD2831_RS35695	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
MRAD2831_RS35700	SM00091	PAS domain
MRAD2831_RS35700	SM00387	Histidine kinase-like ATPases
MRAD2831_RS35700	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS35745	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35765	SM00267	diguanylate cyclase
MRAD2831_RS35765	SM00448	cheY-homologous receiver domain
MRAD2831_RS35770	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS35840	SM01329	MRAD2831_RS35840
MRAD2831_RS35845	SM00448	cheY-homologous receiver domain
MRAD2831_RS35845	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS35850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS35850	SM00387	Histidine kinase-like ATPases
MRAD2831_RS35925	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS35925	SM01086	C-terminal, D2-small domain, of ClpB protein
MRAD2831_RS35945	SM00271	DnaJ molecular chaperone homology domain
MRAD2831_RS35955	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS35970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS35970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS35990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS35990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS36015	SM00487	DEAD-like helicases superfamily
MRAD2831_RS36015	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS36025	SM00248	ankyrin repeats
MRAD2831_RS36030	SM00564	beta-propeller repeat
MRAD2831_RS36055	SM00220	Serine/Threonine protein kinases, catalytic domain
MRAD2831_RS36055	SM00369	Leucine-rich repeats, typical (most populated) subfamily
MRAD2831_RS36070	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS36105	SM00858	MRAD2831_RS36105
MRAD2831_RS36125	SM00014	Acid phosphatase homologues
MRAD2831_RS36165	SM00464	Found in ATP-dependent protease La (LON)
MRAD2831_RS36185	SM00487	DEAD-like helicases superfamily
MRAD2831_RS36185	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS36220	SM01091	Transporter associated domain
MRAD2831_RS36290	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MRAD2831_RS36295	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS36300	SM00448	cheY-homologous receiver domain
MRAD2831_RS36405	SM00448	cheY-homologous receiver domain
MRAD2831_RS36410	SM00904	Riboflavin kinase
MRAD2831_RS36510	SM00822	MRAD2831_RS36510
MRAD2831_RS36520	SM00563	Phosphate acyltransferases
MRAD2831_RS36555	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS36575	SM00881	CoA binding domain
MRAD2831_RS36580	SM00861	Transketolase, pyrimidine binding domain
MRAD2831_RS36595	SM00822	MRAD2831_RS36595
MRAD2831_RS36605	SM00448	cheY-homologous receiver domain
MRAD2831_RS36645	SM00248	ankyrin repeats
MRAD2831_RS36670	SM00316	Ribosomal protein S1-like RNA-binding domain
MRAD2831_RS36670	SM00322	K homology RNA-binding domain
MRAD2831_RS36675	SM01387	MRAD2831_RS36675
MRAD2831_RS36735	SM00822	MRAD2831_RS36735
MRAD2831_RS36735	SM00823	Phosphopantetheine attachment site
MRAD2831_RS36735	SM00825	Beta-ketoacyl synthase
MRAD2831_RS36735	SM00826	MRAD2831_RS36735
MRAD2831_RS36735	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MRAD2831_RS36735	SM00829	Enoylreductase
MRAD2831_RS36740	SM00984	UDP binding domain
MRAD2831_RS36760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS36760	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS36760	SM01049	MRAD2831_RS36760
MRAD2831_RS36820	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS36840	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS36895	SM01192	MRAD2831_RS36895
MRAD2831_RS36895	SM01193	MRAD2831_RS36895
MRAD2831_RS36905	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS36920	SM00861	Transketolase, pyrimidine binding domain
MRAD2831_RS36965	SM00267	diguanylate cyclase
MRAD2831_RS36970	SM00487	DEAD-like helicases superfamily
MRAD2831_RS36970	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS36990	SM00387	Histidine kinase-like ATPases
MRAD2831_RS36990	SM00433	TopoisomeraseII
MRAD2831_RS37000	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
MRAD2831_RS37000	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
MRAD2831_RS37000	SM00493	MRAD2831_RS37000
MRAD2831_RS37050	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS37065	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS37075	SM01130	MRAD2831_RS37075
MRAD2831_RS37255	SM00346	helix_turn_helix isocitrate lyase regulation
MRAD2831_RS37290	SM00028	Tetratricopeptide repeats
MRAD2831_RS37300	SM01001	AIR carboxylase
MRAD2831_RS37365	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS37445	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS37475	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS37500	SM00829	Enoylreductase
MRAD2831_RS37520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS37520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS37530	SM00822	MRAD2831_RS37530
MRAD2831_RS37535	SM01133	MRAD2831_RS37535
MRAD2831_RS37540	SM00855	Phosphoglycerate mutase family
MRAD2831_RS37575	SM01359	MRAD2831_RS37575
MRAD2831_RS37575	SM01360	MRAD2831_RS37575
MRAD2831_RS37615	SM00341	Helicase and RNase D C-terminal
MRAD2831_RS37615	SM00487	DEAD-like helicases superfamily
MRAD2831_RS37615	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS37615	SM00956	MRAD2831_RS37615
MRAD2831_RS37655	SM00354	helix_turn _helix lactose operon repressor
MRAD2831_RS37660	SM01007	Class II Aldolase and Adducin N-terminal domain
MRAD2831_RS37725	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS37730	SM00642	Alpha-amylase domain
MRAD2831_RS37835	SM00984	UDP binding domain
MRAD2831_RS37840	SM00881	CoA binding domain
MRAD2831_RS37855	SM00859	Semialdehyde dehydrogenase, NAD binding domain
MRAD2831_RS37935	SM00822	MRAD2831_RS37935
MRAD2831_RS38125	SM00448	cheY-homologous receiver domain
MRAD2831_RS38125	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS38130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS38130	SM00387	Histidine kinase-like ATPases
MRAD2831_RS38135	SM00267	diguanylate cyclase
MRAD2831_RS38145	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS38145	SM00895	MRAD2831_RS38145
MRAD2831_RS38155	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS38250	SM00387	Histidine kinase-like ATPases
MRAD2831_RS38255	SM00448	cheY-homologous receiver domain
MRAD2831_RS38260	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS38260	SM00448	cheY-homologous receiver domain
MRAD2831_RS38265	SM00387	Histidine kinase-like ATPases
MRAD2831_RS38265	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS38285	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS38290	SM00387	Histidine kinase-like ATPases
MRAD2831_RS38290	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS38295	SM00822	MRAD2831_RS38295
MRAD2831_RS38375	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS38390	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS38415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS38415	SM00911	HWE histidine kinase
MRAD2831_RS38440	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS38445	SM00354	helix_turn _helix lactose operon repressor
MRAD2831_RS38475	SM00855	Phosphoglycerate mutase family
MRAD2831_RS38510	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS38545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS38545	SM00895	MRAD2831_RS38545
MRAD2831_RS38570	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS38575	SM00911	HWE histidine kinase
MRAD2831_RS38590	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS38595	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS38605	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS38620	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS38640	SM01006	Siderophore biosynthesis protein domain
MRAD2831_RS38645	SM00823	Phosphopantetheine attachment site
MRAD2831_RS38680	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS38690	SM01001	AIR carboxylase
MRAD2831_RS38705	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS38715	SM00822	MRAD2831_RS38715
MRAD2831_RS38740	SM00478	endonuclease III
MRAD2831_RS38795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MRAD2831_RS38865	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS38870	SM00773	Proposed nucleic acid binding domain
MRAD2831_RS38875	SM00773	Proposed nucleic acid binding domain
MRAD2831_RS38885	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS38915	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS38970	SM00822	MRAD2831_RS38970
MRAD2831_RS38995	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS39005	SM00829	Enoylreductase
MRAD2831_RS39020	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS39025	SM00971	Serine acetyltransferase, N-terminal
MRAD2831_RS39050	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39070	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39075	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS39080	SM00911	HWE histidine kinase
MRAD2831_RS39085	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS39110	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39115	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39130	SM00387	Histidine kinase-like ATPases
MRAD2831_RS39130	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS39130	SM00448	cheY-homologous receiver domain
MRAD2831_RS39140	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS39140	SM00448	cheY-homologous receiver domain
MRAD2831_RS39150	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39155	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39310	SM00642	Alpha-amylase domain
MRAD2831_RS39315	SM01400	MRAD2831_RS39315
MRAD2831_RS39340	SM00091	PAS domain
MRAD2831_RS39340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS39340	SM00387	Histidine kinase-like ATPases
MRAD2831_RS39340	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS39345	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39345	SM00448	cheY-homologous receiver domain
MRAD2831_RS39360	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS39370	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39420	SM00936	Penicillin-binding protein 5, C-terminal domain 
MRAD2831_RS39435	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS39445	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS39460	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS39500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS39505	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS39510	SM00344	helix_turn_helix ASNC type
MRAD2831_RS39525	SM01209	MRAD2831_RS39525
MRAD2831_RS39525	SM01210	MRAD2831_RS39525
MRAD2831_RS39535	SM00835	Cupin
MRAD2831_RS39545	SM00564	beta-propeller repeat
MRAD2831_RS39550	SM01130	MRAD2831_RS39550
MRAD2831_RS39555	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS39560	SM01092	CO dehydrogenase flavoprotein C-terminal domain
MRAD2831_RS39580	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS39580	SM00387	Histidine kinase-like ATPases
MRAD2831_RS39580	SM00911	HWE histidine kinase
MRAD2831_RS39600	SM00487	DEAD-like helicases superfamily
MRAD2831_RS39600	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS39615	SM01119	MRAD2831_RS39615
MRAD2831_RS39670	SM00911	HWE histidine kinase
MRAD2831_RS39680	SM00947	Carbonic anhydrase
MRAD2831_RS39710	SM00967	RNA 2'-O ribose methyltransferase substrate binding
MRAD2831_RS39730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS39740	SM00829	Enoylreductase
MRAD2831_RS39765	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS39855	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS39855	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS39855	SM00267	diguanylate cyclase
MRAD2831_RS39880	SM00642	Alpha-amylase domain
MRAD2831_RS39890	SM00642	Alpha-amylase domain
MRAD2831_RS39895	SM00642	Alpha-amylase domain
MRAD2831_RS39900	SM00642	Alpha-amylase domain
MRAD2831_RS39905	SM00642	Alpha-amylase domain
MRAD2831_RS39910	SM00642	Alpha-amylase domain
MRAD2831_RS39970	SM00448	cheY-homologous receiver domain
MRAD2831_RS39970	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS40000	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS40000	SM00529	Helix-turn-helix diphteria tox regulatory element
MRAD2831_RS40010	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS40020	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS40035	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS40060	SM00267	diguanylate cyclase
MRAD2831_RS40095	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS40120	SM00829	Enoylreductase
MRAD2831_RS40135	SM00487	DEAD-like helicases superfamily
MRAD2831_RS40135	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS40135	SM00982	MRAD2831_RS40135
MRAD2831_RS40135	SM01058	CarD-like/TRCF domain
MRAD2831_RS40160	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS40175	SM00992	Hemimethylated DNA-binding protein YccV like
MRAD2831_RS40210	SM00487	DEAD-like helicases superfamily
MRAD2831_RS40210	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS40360	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS40435	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS40490	SM01007	Class II Aldolase and Adducin N-terminal domain
MRAD2831_RS40600	SM00363	S4 RNA-binding domain
MRAD2831_RS40600	SM01390	MRAD2831_RS40600
MRAD2831_RS40635	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS40635	SM00267	diguanylate cyclase
MRAD2831_RS40645	SM00387	Histidine kinase-like ATPases
MRAD2831_RS40645	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS40655	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS40660	SM00986	Uracil DNA glycosylase superfamily
MRAD2831_RS40660	SM00987	UreE urease accessory protein, C-terminal domain 
MRAD2831_RS40665	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
MRAD2831_RS40715	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS40720	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS40725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS40725	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS40725	SM01049	MRAD2831_RS40725
MRAD2831_RS40730	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS40730	SM00091	PAS domain
MRAD2831_RS40730	SM00387	Histidine kinase-like ATPases
MRAD2831_RS40730	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS40730	SM00448	cheY-homologous receiver domain
MRAD2831_RS40740	SM01266	MRAD2831_RS40740
MRAD2831_RS40785	SM00858	MRAD2831_RS40785
MRAD2831_RS40820	SM00344	helix_turn_helix ASNC type
MRAD2831_RS40985	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS41035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS41035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS41035	SM01049	MRAD2831_RS41035
MRAD2831_RS41060	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS41065	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS41145	SM00091	PAS domain
MRAD2831_RS41210	SM00267	diguanylate cyclase
MRAD2831_RS41210	SM00448	cheY-homologous receiver domain
MRAD2831_RS41215	SM00448	cheY-homologous receiver domain
MRAD2831_RS41230	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS41300	SM00387	Histidine kinase-like ATPases
MRAD2831_RS41305	SM00448	cheY-homologous receiver domain
MRAD2831_RS41305	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS41325	SM01060	MRAD2831_RS41325
MRAD2831_RS41335	SM01130	MRAD2831_RS41335
MRAD2831_RS41355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS41355	SM00954	Region found in RelA / SpoT proteins
MRAD2831_RS41360	SM01409	MRAD2831_RS41360
MRAD2831_RS41365	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
MRAD2831_RS41370	SM00822	MRAD2831_RS41370
MRAD2831_RS41375	SM00823	Phosphopantetheine attachment site
MRAD2831_RS41380	SM00825	Beta-ketoacyl synthase
MRAD2831_RS41500	SM00267	diguanylate cyclase
MRAD2831_RS41505	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MRAD2831_RS41520	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS41530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS41535	SM00257	Lysin motif
MRAD2831_RS41545	SM00564	beta-propeller repeat
MRAD2831_RS41550	SM00014	Acid phosphatase homologues
MRAD2831_RS41550	SM00869	Autotransporter beta-domain
MRAD2831_RS41585	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS41650	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS41665	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS41670	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS41710	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS41730	SM01130	MRAD2831_RS41730
MRAD2831_RS41735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS41735	SM00895	MRAD2831_RS41735
MRAD2831_RS41780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS41780	SM01049	MRAD2831_RS41780
MRAD2831_RS41870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS41900	SM00271	DnaJ molecular chaperone homology domain
MRAD2831_RS41905	SM00644	MRAD2831_RS41905
MRAD2831_RS41940	SM00481	DNA polymerase alpha chain like domain
MRAD2831_RS41990	SM00478	endonuclease III
MRAD2831_RS41990	SM01009	AlkA N-terminal domain
MRAD2831_RS42000	SM00434	DNA Topoisomerase IV
MRAD2831_RS42030	SM00481	DNA polymerase alpha chain like domain
MRAD2831_RS42045	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS42070	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS42115	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
MRAD2831_RS42125	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MRAD2831_RS42170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS42175	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42180	SM00448	cheY-homologous receiver domain
MRAD2831_RS42180	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS42195	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS42285	SM00448	cheY-homologous receiver domain
MRAD2831_RS42285	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS42290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS42290	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42290	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS42290	SM00448	cheY-homologous receiver domain
MRAD2831_RS42305	SM00448	cheY-homologous receiver domain
MRAD2831_RS42310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS42310	SM00091	PAS domain
MRAD2831_RS42310	SM00911	HWE histidine kinase
MRAD2831_RS42335	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS42340	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS42385	SM00448	cheY-homologous receiver domain
MRAD2831_RS42385	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS42395	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS42395	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42400	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS42400	SM00091	PAS domain
MRAD2831_RS42400	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42400	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS42400	SM00448	cheY-homologous receiver domain
MRAD2831_RS42410	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS42435	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS42460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS42460	SM00895	MRAD2831_RS42460
MRAD2831_RS42485	SM01018	B12 binding domain
MRAD2831_RS42495	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
MRAD2831_RS42500	SM00855	Phosphoglycerate mutase family
MRAD2831_RS42625	SM00434	DNA Topoisomerase IV
MRAD2831_RS42640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS42640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS42665	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS42665	SM00091	PAS domain
MRAD2831_RS42665	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42665	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS42665	SM00448	cheY-homologous receiver domain
MRAD2831_RS42680	SM01259	MRAD2831_RS42680
MRAD2831_RS42705	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS42705	SM00448	cheY-homologous receiver domain
MRAD2831_RS42710	SM00091	PAS domain
MRAD2831_RS42710	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42710	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS42745	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS42765	SM00420	helix_turn_helix, Deoxyribose operon repressor
MRAD2831_RS42765	SM01134	MRAD2831_RS42765
MRAD2831_RS42775	SM00260	Two component signalling adaptor domain
MRAD2831_RS42780	SM00028	Tetratricopeptide repeats
MRAD2831_RS42780	SM00138	Methyltransferase, chemotaxis proteins 
MRAD2831_RS42785	SM00260	Two component signalling adaptor domain
MRAD2831_RS42790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS42790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS42795	SM00073	Histidine Phosphotransfer domain
MRAD2831_RS42795	SM00260	Two component signalling adaptor domain
MRAD2831_RS42795	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42795	SM00448	cheY-homologous receiver domain
MRAD2831_RS42800	SM00448	cheY-homologous receiver domain
MRAD2831_RS42805	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42805	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS42805	SM00448	cheY-homologous receiver domain
MRAD2831_RS42810	SM00387	Histidine kinase-like ATPases
MRAD2831_RS42810	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS42810	SM00448	cheY-homologous receiver domain
MRAD2831_RS42820	SM00662	RNA polymerases D
MRAD2831_RS42825	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS42900	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
MRAD2831_RS42905	SM01374	MRAD2831_RS42905
MRAD2831_RS42925	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS42940	SM00838	Elongation factor G C-terminus
MRAD2831_RS42940	SM00889	Elongation factor G, domain IV
MRAD2831_RS42950	SM01403	MRAD2831_RS42950
MRAD2831_RS42970	SM01382	MRAD2831_RS42970
MRAD2831_RS42970	SM01383	MRAD2831_RS42970
MRAD2831_RS42985	SM00322	K homology RNA-binding domain
MRAD2831_RS43005	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43010	SM00091	PAS domain
MRAD2831_RS43010	SM00387	Histidine kinase-like ATPases
MRAD2831_RS43010	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS43010	SM00448	cheY-homologous receiver domain
MRAD2831_RS43060	SM00480	DNA polymerase III beta subunit
MRAD2831_RS43065	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS43070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS43080	SM00855	Phosphoglycerate mutase family
MRAD2831_RS43100	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS43120	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43125	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43140	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS43155	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43210	SM00257	Lysin motif
MRAD2831_RS43235	SM01323	MRAD2831_RS43235
MRAD2831_RS43260	SM00650	Ribosomal RNA adenine dimethylases
MRAD2831_RS43310	SM00947	Carbonic anhydrase
MRAD2831_RS43350	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS43380	SM01012	MRAD2831_RS43380
MRAD2831_RS43395	SM00861	Transketolase, pyrimidine binding domain
MRAD2831_RS43405	SM01350	MRAD2831_RS43405
MRAD2831_RS43420	SM00344	helix_turn_helix ASNC type
MRAD2831_RS43505	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43555	SM00448	cheY-homologous receiver domain
MRAD2831_RS43555	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS43565	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS43610	SM00864	Tubulin/FtsZ family, GTPase domain
MRAD2831_RS43610	SM00865	Tubulin/FtsZ family, C-terminal domain
MRAD2831_RS43615	SM00842	Cell division protein FtsA
MRAD2831_RS43650	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS43650	SM00091	PAS domain
MRAD2831_RS43650	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS43705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS43705	SM00091	PAS domain
MRAD2831_RS43705	SM00387	Histidine kinase-like ATPases
MRAD2831_RS43705	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS43785	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MRAD2831_RS43795	SM00478	endonuclease III
MRAD2831_RS43795	SM00525	MRAD2831_RS43795
MRAD2831_RS43860	SM00091	PAS domain
MRAD2831_RS43860	SM00387	Histidine kinase-like ATPases
MRAD2831_RS43860	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS43860	SM00448	cheY-homologous receiver domain
MRAD2831_RS43905	SM00882	Coenzyme A transferase
MRAD2831_RS43935	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS43940	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS43940	SM00448	cheY-homologous receiver domain
MRAD2831_RS43945	SM00564	beta-propeller repeat
MRAD2831_RS43950	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS43970	SM00900	MRAD2831_RS43970
MRAD2831_RS44005	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS44035	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS44040	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS44040	SM00267	diguanylate cyclase
MRAD2831_RS44045	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS44080	SM00450	Rhodanese Homology Domain
MRAD2831_RS44100	SM00563	Phosphate acyltransferases
MRAD2831_RS44125	SM00411	bacterial (prokaryotic) histone like domain
MRAD2831_RS44135	SM00316	Ribosomal protein S1-like RNA-binding domain
MRAD2831_RS44145	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS44240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS44240	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS44260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS44265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS44265	SM00387	Histidine kinase-like ATPases
MRAD2831_RS44265	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS44270	SM00448	cheY-homologous receiver domain
MRAD2831_RS44270	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS44305	SM00893	Electron transfer flavoprotein domain
MRAD2831_RS44345	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS44365	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS44370	SM01118	MRAD2831_RS44370
MRAD2831_RS44400	SM00448	cheY-homologous receiver domain
MRAD2831_RS44595	SM00422	helix_turn_helix, mercury resistance
MRAD2831_RS44610	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS44610	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS44615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS44615	SM00895	MRAD2831_RS44615
MRAD2831_RS44630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS44630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS44630	SM01358	MRAD2831_RS44630
MRAD2831_RS44745	SM01034	Sensors of blue-light using FAD
MRAD2831_RS44780	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS44780	SM00091	PAS domain
MRAD2831_RS44780	SM00387	Histidine kinase-like ATPases
MRAD2831_RS44780	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS44785	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS44785	SM00448	cheY-homologous receiver domain
MRAD2831_RS44790	SM00448	cheY-homologous receiver domain
MRAD2831_RS44795	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS44795	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS44800	SM00852	Probable molybdopterin binding domain
MRAD2831_RS44805	SM00852	Probable molybdopterin binding domain
MRAD2831_RS44810	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS44840	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS44855	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS44855	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS44865	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS44880	SM00831	Cation transporter/ATPase, N-terminus
MRAD2831_RS44895	SM00831	Cation transporter/ATPase, N-terminus
MRAD2831_RS44905	SM00749	bacterial OsmY and nodulation domain
MRAD2831_RS44940	SM00749	bacterial OsmY and nodulation domain
MRAD2831_RS44990	SM00749	bacterial OsmY and nodulation domain
MRAD2831_RS45215	SM00917	LeuA allosteric (dimerisation) domain
MRAD2831_RS45225	SM00947	Carbonic anhydrase
MRAD2831_RS45230	SM01329	MRAD2831_RS45230
MRAD2831_RS45245	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS45245	SM00091	PAS domain
MRAD2831_RS45245	SM00387	Histidine kinase-like ATPases
MRAD2831_RS45245	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS45245	SM00448	cheY-homologous receiver domain
MRAD2831_RS45300	SM00825	Beta-ketoacyl synthase
MRAD2831_RS45325	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS45345	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS45345	SM00091	PAS domain
MRAD2831_RS45345	SM00267	diguanylate cyclase
MRAD2831_RS45345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS45405	SM00878	Biotin carboxylase C-terminal domain
MRAD2831_RS45465	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS45540	SM00448	cheY-homologous receiver domain
MRAD2831_RS45560	SM00357	Cold shock protein domain
MRAD2831_RS45570	SM00841	Elongation factor P, C-terminal
MRAD2831_RS45570	SM01185	MRAD2831_RS45570
MRAD2831_RS45630	SM00878	Biotin carboxylase C-terminal domain
MRAD2831_RS45680	SM00448	cheY-homologous receiver domain
MRAD2831_RS45680	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS45710	SM00836	DALR anticodon binding domain
MRAD2831_RS45710	SM01016	Arginyl tRNA synthetase N terminal dom
MRAD2831_RS45720	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS45750	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS45795	SM00387	Histidine kinase-like ATPases
MRAD2831_RS45795	SM00448	cheY-homologous receiver domain
MRAD2831_RS45800	SM00448	cheY-homologous receiver domain
MRAD2831_RS45805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS45805	SM00387	Histidine kinase-like ATPases
MRAD2831_RS45805	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS45830	SM01007	Class II Aldolase and Adducin N-terminal domain
MRAD2831_RS45840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS45840	SM00895	MRAD2831_RS45840
MRAD2831_RS45845	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS45870	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
MRAD2831_RS45870	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
MRAD2831_RS45890	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS45890	SM00448	cheY-homologous receiver domain
MRAD2831_RS46005	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46030	SM00091	PAS domain
MRAD2831_RS46030	SM00911	HWE histidine kinase
MRAD2831_RS46190	SM00988	UreE urease accessory protein, N-terminal domain
MRAD2831_RS46230	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46235	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS46245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS46250	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46310	SM01120	MRAD2831_RS46310
MRAD2831_RS46330	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46345	SM01152	MRAD2831_RS46345
MRAD2831_RS46360	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS46375	SM00895	MRAD2831_RS46375
MRAD2831_RS46395	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS46395	SM00895	MRAD2831_RS46395
MRAD2831_RS46405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS46405	SM00895	MRAD2831_RS46405
MRAD2831_RS46480	SM00671	Sel1-like repeats.
MRAD2831_RS46490	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS46555	SM00448	cheY-homologous receiver domain
MRAD2831_RS46575	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS46620	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS46620	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS46675	SM00893	Electron transfer flavoprotein domain
MRAD2831_RS46680	SM00893	Electron transfer flavoprotein domain
MRAD2831_RS46695	SM00829	Enoylreductase
MRAD2831_RS46710	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46715	SM01248	MRAD2831_RS46715
MRAD2831_RS46720	SM01248	MRAD2831_RS46720
MRAD2831_RS46725	SM00091	PAS domain
MRAD2831_RS46725	SM00387	Histidine kinase-like ATPases
MRAD2831_RS46725	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS46725	SM00448	cheY-homologous receiver domain
MRAD2831_RS46735	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS46735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS46765	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS46775	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS46825	SM00278	Helix-hairpin-helix DNA-binding motif class 1
MRAD2831_RS46825	SM00316	Ribosomal protein S1-like RNA-binding domain
MRAD2831_RS46825	SM00732	Likely ribonuclease with RNase H fold.
MRAD2831_RS46870	SM00822	MRAD2831_RS46870
MRAD2831_RS46880	SM00861	Transketolase, pyrimidine binding domain
MRAD2831_RS46935	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS46935	SM00267	diguanylate cyclase
MRAD2831_RS46940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS46940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS46975	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS46975	SM00091	PAS domain
MRAD2831_RS46975	SM00387	Histidine kinase-like ATPases
MRAD2831_RS46975	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS46975	SM00448	cheY-homologous receiver domain
MRAD2831_RS47005	SM00671	Sel1-like repeats.
MRAD2831_RS47075	SM00387	Histidine kinase-like ATPases
MRAD2831_RS47080	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS47080	SM00448	cheY-homologous receiver domain
MRAD2831_RS47105	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS47105	SM00091	PAS domain
MRAD2831_RS47105	SM00387	Histidine kinase-like ATPases
MRAD2831_RS47105	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS47105	SM00448	cheY-homologous receiver domain
MRAD2831_RS47110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS47110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS47110	SM00091	PAS domain
MRAD2831_RS47110	SM00911	HWE histidine kinase
MRAD2831_RS47170	SM00858	MRAD2831_RS47170
MRAD2831_RS47210	SM00829	Enoylreductase
MRAD2831_RS47225	SM00825	Beta-ketoacyl synthase
MRAD2831_RS47245	SM00880	MRAD2831_RS47245
MRAD2831_RS47245	SM01118	MRAD2831_RS47245
MRAD2831_RS47280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS47280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS47285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS47285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS47295	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS47295	SM01086	C-terminal, D2-small domain, of ClpB protein
MRAD2831_RS47315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS47315	SM00387	Histidine kinase-like ATPases
MRAD2831_RS47315	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS47320	SM00448	cheY-homologous receiver domain
MRAD2831_RS47320	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS47360	SM00852	Probable molybdopterin binding domain
MRAD2831_RS47445	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MRAD2831_RS47500	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS47520	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS47570	SM00331	Sigma factor PP2C-like phosphatases
MRAD2831_RS47570	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
MRAD2831_RS47575	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS47585	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS47600	SM00493	MRAD2831_RS47600
MRAD2831_RS47650	SM00873	B3/4 domain
MRAD2831_RS47650	SM00874	tRNA synthetase B5 domain
MRAD2831_RS47650	SM00896	Ferredoxin-fold anticodon binding domain
MRAD2831_RS47745	SM00267	diguanylate cyclase
MRAD2831_RS47845	SM00320	WD40 repeats
MRAD2831_RS47890	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS47910	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS47910	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS47910	SM00387	Histidine kinase-like ATPases
MRAD2831_RS47910	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS47910	SM00448	cheY-homologous receiver domain
MRAD2831_RS47915	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS47915	SM00387	Histidine kinase-like ATPases
MRAD2831_RS47915	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS47915	SM00448	cheY-homologous receiver domain
MRAD2831_RS47925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS47925	SM00895	MRAD2831_RS47925
MRAD2831_RS47950	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48005	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48045	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS48075	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS48090	SM00895	MRAD2831_RS48090
MRAD2831_RS48135	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS48145	SM00346	helix_turn_helix isocitrate lyase regulation
MRAD2831_RS48205	SM00420	helix_turn_helix, Deoxyribose operon repressor
MRAD2831_RS48205	SM01134	MRAD2831_RS48205
MRAD2831_RS48215	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS48215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS48215	SM00091	PAS domain
MRAD2831_RS48215	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48215	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS48215	SM00448	cheY-homologous receiver domain
MRAD2831_RS48220	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS48225	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS48225	SM00091	PAS domain
MRAD2831_RS48225	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48225	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS48230	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS48230	SM00448	cheY-homologous receiver domain
MRAD2831_RS48235	SM00448	cheY-homologous receiver domain
MRAD2831_RS48240	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS48240	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS48260	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48275	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48290	SM00448	cheY-homologous receiver domain
MRAD2831_RS48290	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS48295	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48295	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS48295	SM00448	cheY-homologous receiver domain
MRAD2831_RS48305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS48325	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS48325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS48340	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS48340	SM00267	diguanylate cyclase
MRAD2831_RS48355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS48355	SM00895	MRAD2831_RS48355
MRAD2831_RS48375	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48385	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48400	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS48410	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS48440	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48445	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48465	SM01012	MRAD2831_RS48465
MRAD2831_RS48505	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS48505	SM00091	PAS domain
MRAD2831_RS48505	SM00911	HWE histidine kinase
MRAD2831_RS48535	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS48545	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48615	SM00796	Allophanate hydrolase subunit 1
MRAD2831_RS48620	SM00797	Allophanate hydrolase subunit 2
MRAD2831_RS48625	SM01007	Class II Aldolase and Adducin N-terminal domain
MRAD2831_RS48690	SM00838	Elongation factor G C-terminus
MRAD2831_RS48810	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS48810	SM00448	cheY-homologous receiver domain
MRAD2831_RS48815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS48815	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48825	SM00487	DEAD-like helicases superfamily
MRAD2831_RS48825	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS48890	SM00354	helix_turn _helix lactose operon repressor
MRAD2831_RS48925	SM00911	HWE histidine kinase
MRAD2831_RS48935	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48960	SM00387	Histidine kinase-like ATPases
MRAD2831_RS48960	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS48965	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS48965	SM00448	cheY-homologous receiver domain
MRAD2831_RS48980	SM00870	MRAD2831_RS48980
MRAD2831_RS48995	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS49045	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS49100	SM00363	S4 RNA-binding domain
MRAD2831_RS49115	SM00358	Double-stranded RNA binding motif
MRAD2831_RS49115	SM00535	Ribonuclease III family
MRAD2831_RS49135	SM00861	Transketolase, pyrimidine binding domain
MRAD2831_RS49145	SM00477	DNA/RNA non-specific endonuclease
MRAD2831_RS49145	SM00892	DNA/RNA non-specific endonuclease
MRAD2831_RS49155	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS49175	SM00852	Probable molybdopterin binding domain
MRAD2831_RS49190	SM00387	Histidine kinase-like ATPases
MRAD2831_RS49190	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS49225	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS49245	SM00822	MRAD2831_RS49245
MRAD2831_RS49250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS49250	SM00387	Histidine kinase-like ATPases
MRAD2831_RS49250	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS49255	SM00448	cheY-homologous receiver domain
MRAD2831_RS49255	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS49290	SM00478	endonuclease III
MRAD2831_RS49355	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MRAD2831_RS49430	SM00226	Low molecular weight phosphatase family
MRAD2831_RS49450	SM00897	FIST N domain
MRAD2831_RS49450	SM01204	MRAD2831_RS49450
MRAD2831_RS49455	SM00387	Histidine kinase-like ATPases
MRAD2831_RS49455	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS49455	SM00448	cheY-homologous receiver domain
MRAD2831_RS49470	SM00151	SWI complex, BAF60b domains
MRAD2831_RS49500	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS49525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS49525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS49530	SM00829	Enoylreductase
MRAD2831_RS49535	SM00091	PAS domain
MRAD2831_RS49535	SM00387	Histidine kinase-like ATPases
MRAD2831_RS49535	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS49535	SM00448	cheY-homologous receiver domain
MRAD2831_RS49540	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
MRAD2831_RS49540	SM00474	3'-5' exonuclease
MRAD2831_RS49540	SM00475	5'-3' exonuclease
MRAD2831_RS49540	SM00479	MRAD2831_RS49540
MRAD2831_RS49540	SM00482	DNA polymerase A domain
MRAD2831_RS49555	SM00986	Uracil DNA glycosylase superfamily
MRAD2831_RS49555	SM00987	UreE urease accessory protein, C-terminal domain 
MRAD2831_RS49560	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS49575	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS49610	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS49625	SM00822	MRAD2831_RS49625
MRAD2831_RS49665	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS49675	SM00448	cheY-homologous receiver domain
MRAD2831_RS49685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS49685	SM00091	PAS domain
MRAD2831_RS49685	SM00387	Histidine kinase-like ATPases
MRAD2831_RS49685	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS49685	SM00448	cheY-homologous receiver domain
MRAD2831_RS49710	SM00316	Ribosomal protein S1-like RNA-binding domain
MRAD2831_RS49710	SM00955	MRAD2831_RS49710
MRAD2831_RS49755	SM00028	Tetratricopeptide repeats
MRAD2831_RS49775	SM00422	helix_turn_helix, mercury resistance
MRAD2831_RS49790	SM00387	Histidine kinase-like ATPases
MRAD2831_RS49790	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS49855	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS49935	SM00830	Chorismate mutase type II
MRAD2831_RS49940	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS49940	SM00962	SRP54-type protein, GTPase domain
MRAD2831_RS49940	SM00963	SRP54-type protein, helical bundle domain
MRAD2831_RS49980	SM00938	Nitrogen regulatory protein P-II
MRAD2831_RS50065	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS50165	SM00881	CoA binding domain
MRAD2831_RS50210	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS50210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS50215	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS50230	SM00852	Probable molybdopterin binding domain
MRAD2831_RS50255	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS50255	SM00387	Histidine kinase-like ATPases
MRAD2831_RS50255	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS50255	SM00448	cheY-homologous receiver domain
MRAD2831_RS50265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MRAD2831_RS50325	SM00271	DnaJ molecular chaperone homology domain
MRAD2831_RS50340	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS50365	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS50370	SM00363	S4 RNA-binding domain
MRAD2831_RS50380	SM01058	CarD-like/TRCF domain
MRAD2831_RS50400	SM00978	MRAD2831_RS50400
MRAD2831_RS50405	SM00925	MltA specific insert domain
MRAD2831_RS50415	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
MRAD2831_RS50415	SM01232	MRAD2831_RS50415
MRAD2831_RS50435	SM00072	Guanylate kinase homologues.
MRAD2831_RS50450	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS50450	SM00387	Histidine kinase-like ATPases
MRAD2831_RS50480	SM00316	Ribosomal protein S1-like RNA-binding domain
MRAD2831_RS50480	SM00322	K homology RNA-binding domain
MRAD2831_RS50510	SM00829	Enoylreductase
MRAD2831_RS50540	SM00822	MRAD2831_RS50540
MRAD2831_RS50565	SM00563	Phosphate acyltransferases
MRAD2831_RS50575	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS50575	SM00843	MRAD2831_RS50575
MRAD2831_RS50690	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS50695	SM00971	Serine acetyltransferase, N-terminal
MRAD2831_RS50770	SM00858	MRAD2831_RS50770
MRAD2831_RS50810	SM00450	Rhodanese Homology Domain
MRAD2831_RS50860	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS50870	SM00487	DEAD-like helicases superfamily
MRAD2831_RS50870	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS50895	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS50940	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS50940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS50950	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS50995	SM00829	Enoylreductase
MRAD2831_RS51010	SM00663	RNA polymerase I subunit A N-terminus
MRAD2831_RS51030	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS51040	SM00649	Ribosomal protein L11/L12
MRAD2831_RS51045	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
MRAD2831_RS51045	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
MRAD2831_RS51080	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS51085	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS51115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS51115	SM00866	MRAD2831_RS51115
MRAD2831_RS51135	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS51305	SM01005	Alanine racemase, C-terminal domain
MRAD2831_RS51310	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS51315	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS51360	SM00633	Glycosyl hydrolase family 10
MRAD2831_RS51380	SM00881	CoA binding domain
MRAD2831_RS51425	SM00271	DnaJ molecular chaperone homology domain
MRAD2831_RS51440	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
MRAD2831_RS51445	SM01133	MRAD2831_RS51445
MRAD2831_RS51495	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS51525	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS51535	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS51640	SM00763	PrkA AAA domain
MRAD2831_RS51655	SM00422	helix_turn_helix, mercury resistance
MRAD2831_RS51660	SM00411	bacterial (prokaryotic) histone like domain
MRAD2831_RS51695	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS51695	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS51695	SM00091	PAS domain
MRAD2831_RS51695	SM00911	HWE histidine kinase
MRAD2831_RS51785	SM00861	Transketolase, pyrimidine binding domain
MRAD2831_RS51790	SM01329	MRAD2831_RS51790
MRAD2831_RS51815	SM00448	cheY-homologous receiver domain
MRAD2831_RS51875	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS51885	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
MRAD2831_RS51970	SM00671	Sel1-like repeats.
MRAD2831_RS51975	SM00870	MRAD2831_RS51975
MRAD2831_RS51985	SM00138	Methyltransferase, chemotaxis proteins 
MRAD2831_RS51990	SM00448	cheY-homologous receiver domain
MRAD2831_RS51995	SM00448	cheY-homologous receiver domain
MRAD2831_RS52000	SM00260	Two component signalling adaptor domain
MRAD2831_RS52005	SM00073	Histidine Phosphotransfer domain
MRAD2831_RS52005	SM00260	Two component signalling adaptor domain
MRAD2831_RS52005	SM00387	Histidine kinase-like ATPases
MRAD2831_RS52005	SM00448	cheY-homologous receiver domain
MRAD2831_RS52005	SM01231	MRAD2831_RS52005
MRAD2831_RS52100	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS52105	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS52110	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS52130	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS52130	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS52140	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS52180	SM00448	cheY-homologous receiver domain
MRAD2831_RS52180	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS52185	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS52205	SM00028	Tetratricopeptide repeats
MRAD2831_RS52215	SM00986	Uracil DNA glycosylase superfamily
MRAD2831_RS52215	SM00987	UreE urease accessory protein, C-terminal domain 
MRAD2831_RS52230	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS52270	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS52285	SM01228	MRAD2831_RS52285
MRAD2831_RS52300	SM00470	ParB-like nuclease domain
MRAD2831_RS52330	SM00014	Acid phosphatase homologues
MRAD2831_RS52350	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS52355	SM00448	cheY-homologous receiver domain
MRAD2831_RS52355	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS52375	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS52430	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS52430	SM00843	MRAD2831_RS52430
MRAD2831_RS52540	SM00346	helix_turn_helix isocitrate lyase regulation
MRAD2831_RS52570	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS52585	SM00857	Resolvase, N terminal domain
MRAD2831_RS52755	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS52755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS52755	SM00091	PAS domain
MRAD2831_RS52755	SM00267	diguanylate cyclase
MRAD2831_RS52775	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS52775	SM00448	cheY-homologous receiver domain
MRAD2831_RS52795	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS52805	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS52820	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS52835	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS52840	SM00564	beta-propeller repeat
MRAD2831_RS52855	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS52855	SM00267	diguanylate cyclase
MRAD2831_RS52880	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS52915	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS52940	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS52940	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
MRAD2831_RS52945	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS52950	SM00869	Autotransporter beta-domain
MRAD2831_RS52960	SM00448	cheY-homologous receiver domain
MRAD2831_RS52965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS52965	SM00091	PAS domain
MRAD2831_RS52965	SM00911	HWE histidine kinase
MRAD2831_RS53060	SM01118	MRAD2831_RS53060
MRAD2831_RS53070	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS53070	SM00091	PAS domain
MRAD2831_RS53070	SM00267	diguanylate cyclase
MRAD2831_RS53085	SM01092	CO dehydrogenase flavoprotein C-terminal domain
MRAD2831_RS53090	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS53110	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS53110	SM00091	PAS domain
MRAD2831_RS53110	SM00387	Histidine kinase-like ATPases
MRAD2831_RS53110	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS53110	SM00448	cheY-homologous receiver domain
MRAD2831_RS53115	SM00387	Histidine kinase-like ATPases
MRAD2831_RS53115	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS53115	SM00448	cheY-homologous receiver domain
MRAD2831_RS53120	SM00448	cheY-homologous receiver domain
MRAD2831_RS53125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS53125	SM00387	Histidine kinase-like ATPases
MRAD2831_RS53125	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS53185	SM00479	MRAD2831_RS53185
MRAD2831_RS53215	SM00357	Cold shock protein domain
MRAD2831_RS53215	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53215	SM00959	Rho termination factor, N-terminal domain
MRAD2831_RS53280	SM00054	EF-hand, calcium binding motif
MRAD2831_RS53290	SM00028	Tetratricopeptide repeats
MRAD2831_RS53295	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS53300	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS53405	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS53430	SM00448	cheY-homologous receiver domain
MRAD2831_RS53450	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53485	SM00507	HNH nucleases
MRAD2831_RS53495	SM00267	diguanylate cyclase
MRAD2831_RS53505	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53535	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS53535	SM00091	PAS domain
MRAD2831_RS53535	SM00267	diguanylate cyclase
MRAD2831_RS53560	SM00646	MRAD2831_RS53560
MRAD2831_RS53570	SM01211	MRAD2831_RS53570
MRAD2831_RS53585	SM00448	cheY-homologous receiver domain
MRAD2831_RS53590	SM00387	Histidine kinase-like ATPases
MRAD2831_RS53590	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS53615	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53620	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53630	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53655	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53705	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS53705	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS53705	SM00091	PAS domain
MRAD2831_RS53705	SM00387	Histidine kinase-like ATPases
MRAD2831_RS53705	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS53705	SM00448	cheY-homologous receiver domain
MRAD2831_RS53710	SM00487	DEAD-like helicases superfamily
MRAD2831_RS53710	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS53710	SM00982	MRAD2831_RS53710
MRAD2831_RS53710	SM01058	CarD-like/TRCF domain
MRAD2831_RS53770	SM00867	YceI-like domain 
MRAD2831_RS53780	SM00867	YceI-like domain 
MRAD2831_RS53820	SM01060	MRAD2831_RS53820
MRAD2831_RS53825	SM01034	Sensors of blue-light using FAD
MRAD2831_RS53830	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS53830	SM00267	diguanylate cyclase
MRAD2831_RS53870	SM00490	helicase superfamily c-terminal domain
MRAD2831_RS53885	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS53900	SM01012	MRAD2831_RS53900
MRAD2831_RS53920	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53925	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS53950	SM00091	PAS domain
MRAD2831_RS53950	SM00138	Methyltransferase, chemotaxis proteins 
MRAD2831_RS53950	SM00911	HWE histidine kinase
MRAD2831_RS53960	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS53960	SM00387	Histidine kinase-like ATPases
MRAD2831_RS53960	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS53960	SM00448	cheY-homologous receiver domain
MRAD2831_RS53980	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS53995	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS53995	SM00267	diguanylate cyclase
MRAD2831_RS54005	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS54015	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS54040	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS54095	SM00091	PAS domain
MRAD2831_RS54095	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS54110	SM00642	Alpha-amylase domain
MRAD2831_RS54185	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54190	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54225	SM01092	CO dehydrogenase flavoprotein C-terminal domain
MRAD2831_RS54230	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS54255	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS54270	SM00091	PAS domain
MRAD2831_RS54270	SM00911	HWE histidine kinase
MRAD2831_RS54350	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS54350	SM00091	PAS domain
MRAD2831_RS54425	SM00244	prohibitin homologues
MRAD2831_RS54430	SM00244	prohibitin homologues
MRAD2831_RS54435	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS54485	SM01116	MRAD2831_RS54485
MRAD2831_RS54490	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS54490	SM00091	PAS domain
MRAD2831_RS54490	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54495	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS54495	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS54625	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54645	SM00028	Tetratricopeptide repeats
MRAD2831_RS54645	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS54665	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54700	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54715	SM00267	diguanylate cyclase
MRAD2831_RS54720	SM00331	Sigma factor PP2C-like phosphatases
MRAD2831_RS54740	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54810	SM00984	UDP binding domain
MRAD2831_RS54815	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS54875	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS54950	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS54980	SM01234	MRAD2831_RS54980
MRAD2831_RS54995	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS54995	SM00895	MRAD2831_RS54995
MRAD2831_RS55010	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS55035	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS55035	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS55060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MRAD2831_RS55085	SM00091	PAS domain
MRAD2831_RS55085	SM00387	Histidine kinase-like ATPases
MRAD2831_RS55085	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS55150	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS55175	SM00822	MRAD2831_RS55175
MRAD2831_RS55295	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS55320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS55320	SM00387	Histidine kinase-like ATPases
MRAD2831_RS55320	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS55325	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS55325	SM00448	cheY-homologous receiver domain
MRAD2831_RS55345	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS55355	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS55360	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS55365	SM01092	CO dehydrogenase flavoprotein C-terminal domain
MRAD2831_RS55435	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS55510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS55535	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS55540	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS55560	SM00833	Cobalamin synthesis protein cobW C-terminal domain
MRAD2831_RS55610	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS55650	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS55650	SM00267	diguanylate cyclase
MRAD2831_RS55735	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS55735	SM00448	cheY-homologous receiver domain
MRAD2831_RS55740	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS55740	SM00091	PAS domain
MRAD2831_RS55740	SM00387	Histidine kinase-like ATPases
MRAD2831_RS55740	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS55740	SM00448	cheY-homologous receiver domain
MRAD2831_RS55765	SM01230	MRAD2831_RS55765
MRAD2831_RS55785	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS55790	SM00448	cheY-homologous receiver domain
MRAD2831_RS55800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS55805	SM00073	Histidine Phosphotransfer domain
MRAD2831_RS55805	SM00260	Two component signalling adaptor domain
MRAD2831_RS55805	SM00387	Histidine kinase-like ATPases
MRAD2831_RS55805	SM01231	MRAD2831_RS55805
MRAD2831_RS55810	SM00260	Two component signalling adaptor domain
MRAD2831_RS55815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS55815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS55820	SM00260	Two component signalling adaptor domain
MRAD2831_RS55825	SM00138	Methyltransferase, chemotaxis proteins 
MRAD2831_RS55830	SM00448	cheY-homologous receiver domain
MRAD2831_RS55845	SM01005	Alanine racemase, C-terminal domain
MRAD2831_RS55850	SM00344	helix_turn_helix ASNC type
MRAD2831_RS55900	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS55900	SM00866	MRAD2831_RS55900
MRAD2831_RS55920	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS55945	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS55965	SM00448	cheY-homologous receiver domain
MRAD2831_RS55970	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS55990	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS56075	SM01007	Class II Aldolase and Adducin N-terminal domain
MRAD2831_RS56085	SM00858	MRAD2831_RS56085
MRAD2831_RS56090	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS56105	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS56110	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS56175	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS56335	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS56345	SM00062	Bacterial periplasmic substrate-binding proteins
MRAD2831_RS56350	SM01130	MRAD2831_RS56350
MRAD2831_RS56380	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS56380	SM00895	MRAD2831_RS56380
MRAD2831_RS56435	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS56435	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS56505	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS56550	SM00020	Trypsin-like serine protease
MRAD2831_RS56555	SM00020	Trypsin-like serine protease
MRAD2831_RS56650	SM00448	cheY-homologous receiver domain
MRAD2831_RS56650	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS56660	SM00387	Histidine kinase-like ATPases
MRAD2831_RS56695	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
MRAD2831_RS56700	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
MRAD2831_RS56700	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
MRAD2831_RS56710	SM00882	Coenzyme A transferase
MRAD2831_RS56715	SM00882	Coenzyme A transferase
MRAD2831_RS56730	SM00849	Metallo-beta-lactamase superfamily
MRAD2831_RS56745	SM00448	cheY-homologous receiver domain
MRAD2831_RS56770	SM00100	Cyclic nucleotide-monophosphate binding domain
MRAD2831_RS56790	SM00318	Staphylococcal nuclease homologues
MRAD2831_RS56815	SM00357	Cold shock protein domain
MRAD2831_RS56855	SM00563	Phosphate acyltransferases
MRAD2831_RS56875	SM01049	MRAD2831_RS56875
MRAD2831_RS56885	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS56900	SM00342	helix_turn_helix, arabinose operon control protein
MRAD2831_RS56975	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS56975	SM00448	cheY-homologous receiver domain
MRAD2831_RS57030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS57030	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57035	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS57035	SM00876	Biotin and Thiamin Synthesis associated domain
MRAD2831_RS57085	SM00937	MRAD2831_RS57085
MRAD2831_RS57095	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS57100	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS57160	SM00345	helix_turn_helix gluconate operon transcriptional repressor
MRAD2831_RS57160	SM00895	MRAD2831_RS57160
MRAD2831_RS57245	SM00244	prohibitin homologues
MRAD2831_RS57295	SM00822	MRAD2831_RS57295
MRAD2831_RS57325	SM00474	3'-5' exonuclease
MRAD2831_RS57340	SM01230	MRAD2831_RS57340
MRAD2831_RS57345	SM01230	MRAD2831_RS57345
MRAD2831_RS57355	SM00938	Nitrogen regulatory protein P-II
MRAD2831_RS57385	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS57385	SM00994	ClpX C4-type zinc finger
MRAD2831_RS57385	SM01086	C-terminal, D2-small domain, of ClpB protein
MRAD2831_RS57390	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS57390	SM00464	Found in ATP-dependent protease La (LON)
MRAD2831_RS57415	SM00822	MRAD2831_RS57415
MRAD2831_RS57430	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS57460	SM01130	MRAD2831_RS57460
MRAD2831_RS57470	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MRAD2831_RS57480	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS57520	SM00327	von Willebrand factor (vWF) type A domain
MRAD2831_RS57520	SM00609	Vault protein Inter-alpha-Trypsin domain
MRAD2831_RS57530	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS57545	SM00942	Primase C terminal 1 (PriCT-1)
MRAD2831_RS57545	SM00943	Bifunctional DNA primase/polymerase, N-terminal
MRAD2831_RS57550	SM00885	D5 N terminal like
MRAD2831_RS57695	SM00470	ParB-like nuclease domain
MRAD2831_RS57785	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS57790	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57790	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57790	SM00448	cheY-homologous receiver domain
MRAD2831_RS57800	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57800	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57800	SM00448	cheY-homologous receiver domain
MRAD2831_RS57805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS57805	SM00091	PAS domain
MRAD2831_RS57805	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57805	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57810	SM00448	cheY-homologous receiver domain
MRAD2831_RS57815	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57815	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57815	SM00448	cheY-homologous receiver domain
MRAD2831_RS57825	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS57825	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS57825	SM00091	PAS domain
MRAD2831_RS57825	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57825	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57825	SM00448	cheY-homologous receiver domain
MRAD2831_RS57840	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57845	SM00331	Sigma factor PP2C-like phosphatases
MRAD2831_RS57850	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57850	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57850	SM00448	cheY-homologous receiver domain
MRAD2831_RS57855	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
MRAD2831_RS57855	SM00091	PAS domain
MRAD2831_RS57855	SM00387	Histidine kinase-like ATPases
MRAD2831_RS57855	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS57855	SM00448	cheY-homologous receiver domain
MRAD2831_RS57860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS57860	SM00911	HWE histidine kinase
MRAD2831_RS57925	SM00867	YceI-like domain 
MRAD2831_RS57935	SM00867	YceI-like domain 
MRAD2831_RS58010	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS58020	SM00855	Phosphoglycerate mutase family
MRAD2831_RS58075	SM00829	Enoylreductase
MRAD2831_RS58295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS58295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS58315	SM00478	endonuclease III
MRAD2831_RS58315	SM00525	MRAD2831_RS58315
MRAD2831_RS58320	SM00871	Bacterial transcription activator, effector binding domain
MRAD2831_RS58330	SM00729	Elongator protein 3, MiaB family, Radical SAM
MRAD2831_RS58340	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS58340	SM00962	SRP54-type protein, GTPase domain
MRAD2831_RS58340	SM00963	SRP54-type protein, helical bundle domain
MRAD2831_RS58390	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS58395	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS58410	SM00852	Probable molybdopterin binding domain
MRAD2831_RS58485	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS58540	SM00357	Cold shock protein domain
MRAD2831_RS58670	SM00465	GIY-YIG type nucleases (URI domain)
MRAD2831_RS58790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
MRAD2831_RS58825	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS58825	SM00267	diguanylate cyclase
MRAD2831_RS58875	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS58875	SM01086	C-terminal, D2-small domain, of ClpB protein
MRAD2831_RS58910	SM00822	MRAD2831_RS58910
MRAD2831_RS58940	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS58940	SM00924	MgtE intracellular N domain
MRAD2831_RS58950	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
MRAD2831_RS58955	SM01092	CO dehydrogenase flavoprotein C-terminal domain
MRAD2831_RS58990	SM00387	Histidine kinase-like ATPases
MRAD2831_RS59005	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS59025	SM00710	Parallel beta-helix repeats
MRAD2831_RS59085	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS59155	SM00822	MRAD2831_RS59155
MRAD2831_RS59165	SM00822	MRAD2831_RS59165
MRAD2831_RS59180	SM00834	Putative regulatory protein
MRAD2831_RS59195	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS59220	SM00387	Histidine kinase-like ATPases
MRAD2831_RS59220	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS59220	SM00448	cheY-homologous receiver domain
MRAD2831_RS59225	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS59225	SM00448	cheY-homologous receiver domain
MRAD2831_RS59245	SM00641	Glycosyl hydrolases family 25
MRAD2831_RS59250	SM00419	helix_turn_helix, cAMP Regulatory protein
MRAD2831_RS59255	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS59275	SM00271	DnaJ molecular chaperone homology domain
MRAD2831_RS59295	SM00855	Phosphoglycerate mutase family
MRAD2831_RS59305	SM00267	diguanylate cyclase
MRAD2831_RS59310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
MRAD2831_RS59310	SM00091	PAS domain
MRAD2831_RS59310	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS59330	SM00448	cheY-homologous receiver domain
MRAD2831_RS59360	SM00448	cheY-homologous receiver domain
MRAD2831_RS59365	SM01034	Sensors of blue-light using FAD
MRAD2831_RS59505	SM00840	MRAD2831_RS59505
MRAD2831_RS59510	SM00020	Trypsin-like serine protease
MRAD2831_RS59515	SM00448	cheY-homologous receiver domain
MRAD2831_RS59515	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS59520	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS59550	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS59555	SM00091	PAS domain
MRAD2831_RS59565	SM00116	Domain in cystathionine beta-synthase and other proteins.
MRAD2831_RS59595	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS59615	SM00798	AICARFT/IMPCHase bienzyme
MRAD2831_RS59615	SM00851	MGS-like domain
MRAD2831_RS59645	SM00091	PAS domain
MRAD2831_RS59645	SM00387	Histidine kinase-like ATPases
MRAD2831_RS59665	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS59670	SM00460	Transglutaminase/protease-like homologues
MRAD2831_RS59675	SM00448	cheY-homologous receiver domain
MRAD2831_RS59685	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
MRAD2831_RS59720	SM00344	helix_turn_helix ASNC type
MRAD2831_RS59810	SM00347	helix_turn_helix multiple antibiotic resistance protein
MRAD2831_RS59820	SM01004	Delta-aminolevulinic acid dehydratase
MRAD2831_RS59840	SM00998	Adenylosuccinate lyase C-terminus
MRAD2831_RS59855	SM00788	Adenylosuccinate synthetase
MRAD2831_RS59870	SM00363	S4 RNA-binding domain
MRAD2831_RS59905	SM00091	PAS domain
MRAD2831_RS59905	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS59945	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
MRAD2831_RS59945	SM00448	cheY-homologous receiver domain
MRAD2831_RS59950	SM00448	cheY-homologous receiver domain
MRAD2831_RS59955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS59955	SM00387	Histidine kinase-like ATPases
MRAD2831_RS59955	SM00388	His Kinase A (phosphoacceptor) domain
MRAD2831_RS60115	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS60115	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
MRAD2831_RS60125	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
MRAD2831_RS60170	SM00857	Resolvase, N terminal domain
MRAD2831_RS60195	SM00138	Methyltransferase, chemotaxis proteins 
MRAD2831_RS60275	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS60295	SM00530	Helix-turn-helix XRE-family like proteins 
MRAD2831_RS60375	SM00052	Putative diguanylate phosphodiesterase
MRAD2831_RS60375	SM00267	diguanylate cyclase
MRAD2831_RS60410	SM00671	Sel1-like repeats.
MRAD2831_RS60425	SM00421	helix_turn_helix, Lux Regulon
MRAD2831_RS60440	SM01329	MRAD2831_RS60440
MRAD2831_RS60455	SM00382	ATPases associated with a variety of cellular activities
MRAD2831_RS61170	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
MRAD2831_RS61655	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
MRAD2831_RS61705	SM00903	Flavin reductase like domain
MRAD2831_RS62205	SM00911	HWE histidine kinase
MRAD2831_RS62855	SM00862	Transcriptional regulatory protein, C terminal
MRAD2831_RS64745	SM00448	cheY-homologous receiver domain
MRAD2831_RS64775	SM00530	Helix-turn-helix XRE-family like proteins 
