locus strain_id interpro function go others MEALZ_RS00005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001957|IPR003593|IPR010921|IPR013159|IPR018312|IPR020591|IPR024633|IPR027417 AAA+ ATPase domain|Chromosomal replication control, initiator DnaA|Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00377|PF08299|PF11638|PR00051|PS01008|PTHR30050|PTHR30050:SF2|SM00382|SM00760|SSF48295|SSF52540|TIGR00362 MEALZ_RS00010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001001|IPR022634|IPR022635|IPR022637 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal|DNA polymerase III, beta chain, central GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02767|PF02768|PIRSF000804|PTHR30478|SM00480|SSF55979|TIGR00663 MEALZ_RS00015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001238|IPR003395|IPR027417 DNA-binding, RecF|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0003697|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00365|PF02463|PTHR32182|SSF52540|TIGR00611 MEALZ_RS00020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|PTHR10169|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 MEALZ_RS00030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019270 Protein of unknown function DUF2283 PF10049|PTHR37029|PTHR37029:SF1 MEALZ_RS00040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 MEALZ_RS00045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF4|SSF111369|TIGR01730 MEALZ_RS00050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF24|SSF82693|SSF82714|SSF82866|TIGR00914 MEALZ_RS00055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015867|IPR021634 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal|Protein of unknown function DUF3240 G3DSA:3.30.70.120|PF11582 MEALZ_RS00060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013655|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08447|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS00065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS00070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS00075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008557|IPR011042 Protein of unknown function DUF839|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF05787|PTHR35399|PTHR35399:SF2|SSF63829 MEALZ_RS00080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|PTHR33162|TIGR01411 MEALZ_RS00085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003369|IPR003998|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0043953 MF_00237|PF02416|PR01506|PTHR33162|PTHR33162:SF4|TIGR01410 MEALZ_RS00095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005123|IPR006620|IPR012336 Oxoglutarate/iron-dependent dioxygenase|Prolyl 4-hydroxylase, alpha subunit|Thioredoxin-like fold GO:0005506|GO:0016491|GO:0016705|GO:0031418|GO:0055114 PF13640|SM00702|SSF52833 MEALZ_RS00100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|PTHR30589|PTHR30589:SF0|TIGR00544 MEALZ_RS00105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000398|IPR023451 Thymidylate synthase|Thymidylate synthase/dCMP hydroxymethylase domain GO:0004799|GO:0006231 G3DSA:3.30.572.10|MF_00008|PF00303|PR00108|PTHR11548|SSF55831|TIGR03284 MEALZ_RS00115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004027|IPR032710 NTF2-like domain|SEC-C motif G3DSA:3.10.450.50|PF02810|PTHR33747|SSF103642|SSF54427 MEALZ_RS00120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018335|IPR018488|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Transcription regulator HTH, Crp-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF00325|PR00034|PS00042|PS00888|PTHR24567|PTHR24567:SF27|SM00100|SM00419|SSF46785|SSF51206 MEALZ_RS00125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003718|IPR015946 K homology domain-like, alpha/beta|OsmC/Ohr family G3DSA:2.20.25.10|G3DSA:3.30.300.20|PF02566|PTHR34352|SSF82784 MEALZ_RS00130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003826|IPR009165|IPR016067 S-adenosylmethionine decarboxylase family, prokaryotic|S-adenosylmethionine decarboxylase, bacterial|S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 G3DSA:3.60.90.10|MF_00465|PF02675|PIRSF001356|PTHR33866|PTHR33866:SF1|SSF56276|TIGR03331 MEALZ_RS00135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006597|IPR011990|IPR029030 Caspase-like domain|Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF08238|PTHR22576|SM00671|SSF52129|SSF57997|SSF81901 MEALZ_RS00140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel GO:0019867 PF03797|SM00869|SSF103515|TIGR01414 MEALZ_RS00165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025493 Domain of unknown function DUF4384 PF14326|PTHR36194 MEALZ_RS00185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029030 Caspase-like domain G3DSA:3.40.50.1460|PF00656|PTHR22576|PTHR22576:SF30|SSF52129 MEALZ_RS00190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF58100 MEALZ_RS00195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13242|PTHR19288|PTHR19288:SF43|SSF56784 MEALZ_RS00205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016 MEALZ_RS00210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|PTHR11562|PTHR11562:SF55|SSF160240|SSF161111|TIGR01297 MEALZ_RS00225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004888|IPR008928 Glycoside hydrolase family 63|Six-hairpin glycosidase-like GO:0003824|GO:0004573|GO:0009311 PTHR10412|PTHR10412:SF10|SSF48208 MEALZ_RS00230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018488|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PS00889|PTHR24567|PTHR24567:SF30|SM00100|SM00419|SSF46785|SSF51206 MEALZ_RS00240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001054|IPR029787 Adenylyl cyclase class-3/4/guanylyl cyclase|Nucleotide cyclase GO:0009190|GO:0016849|GO:0035556 G3DSA:3.30.70.1230|PF00211|PTHR11920|PTHR11920:SF341|SSF55073 MEALZ_RS00255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR003018|IPR003594|IPR003661|IPR004358|IPR011009|IPR027417|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Protein kinase domain|Protein kinase-like domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004672|GO:0005515|GO:0005524|GO:0006468|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.300|PF00069|PF02518|PF13185|PF13191|PR00344|PTHR16305|PTHR16305:SF31|SM00065|SM00220|SM00387|SM00388|SSF47384|SSF52540|SSF55781|SSF55874|SSF56112 MEALZ_RS00260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 MEALZ_RS00265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR001789|IPR011006|IPR013767|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold|Signal transduction response regulator, receiver domain GO:0000160|GO:0006355 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00989|PF00990|PTHR33121|PTHR33121:SF10|SM00052|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS00270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 MEALZ_RS00275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027354 YcgL domain MF_01866|PD030374|PF05166|PTHR38109|SSF160191 MEALZ_RS00280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002797|IPR029303 Polysaccharide biosynthesis protein|Polysaccharide biosynthesis protein, C-terminal domain GO:0016020 PF01943|PF14667|PTHR30250 MEALZ_RS00285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000863|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Sulfotransferase domain GO:0008146 G3DSA:3.40.50.300|PF00685|SSF52540 MEALZ_RS00290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000863|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Sulfotransferase domain GO:0008146 G3DSA:3.40.50.300|PF00685|PTHR11783|PTHR11783:SF15|SSF52540 MEALZ_RS00295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13469|PTHR10605|PTHR10605:SF40|SSF52540 MEALZ_RS00300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 MEALZ_RS00305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 MEALZ_RS00310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF4|SSF53448 MEALZ_RS00315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 MEALZ_RS00320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 MEALZ_RS00325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PTHR10366|PTHR10366:SF329|SSF51735 MEALZ_RS00330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 PF00953|PTHR22926|PTHR22926:SF3 MEALZ_RS00335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012547|IPR018631|IPR027417 AAA-ATPase-like domain|P-loop containing nucleoside triphosphate hydrolase|PD-(D/E)XK nuclease superfamily 9 PF08011|PF09820|PTHR34825|PTHR34825:SF1|SSF52540 MEALZ_RS00340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003869|IPR016040 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF02719|PTHR10366|PTHR10366:SF256|SSF51735 MEALZ_RS00350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 MEALZ_RS00355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015985|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Tellurite resistance methyltransferase TehB-like domain G3DSA:3.40.50.150|PF03848|SSF53335 MEALZ_RS00360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|SM00450|SSF52821 MEALZ_RS00365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006298|IPR009000|IPR009022|IPR027417|IPR031157 Elongation factor G, III-V domain|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF14|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 MEALZ_RS00370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|PS00955|PTHR23133|PTHR23133:SF2|SSF54211 MEALZ_RS00375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|PTHR21235|PTHR21235:SF1|SSF52317|TIGR01855 MEALZ_RS00380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006062|IPR006063|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|PTHR21235|PTHR21235:SF15|SSF51366|TIGR00007 MEALZ_RS00385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|PTHR21235|PTHR21235:SF2|SSF51366|TIGR00735 MEALZ_RS00390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|PTHR21256|SSF141734 MEALZ_RS00395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008179|IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase|Phosphoribosyl-ATP pyrophosphohydrolase-like GO:0000105|GO:0004636 MF_01020|PF01503|PTHR21256|SSF101386|TIGR03188 MEALZ_RS00400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003369|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MF_00236|PF02416|PTHR33162|TIGR01411 MEALZ_RS00405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003369|IPR003998|IPR018448 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0043953 MF_00237|PF02416|PR01506|PTHR33162|PTHR33162:SF4|TIGR01410 MEALZ_RS00410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002033|IPR019820 Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site GO:0016021 MF_00902|PF00902|PR01840|PS01218|PTHR30371|PTHR30371:SF0|TIGR00945 MEALZ_RS00415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|SSF52266 MEALZ_RS00420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF211|SSF51735 MEALZ_RS00425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011009 Protein kinase-like domain SSF56112 MEALZ_RS00430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PTHR20941|PTHR20941:SF12|SSF55083|TIGR01498 MEALZ_RS00435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006156|IPR006157 Dihydroneopterin aldolase|Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 G3DSA:3.30.1130.10|PF02152|PTHR20941|SM00905|SSF55620|TIGR00525|TIGR00526 MEALZ_RS00440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|PTHR30309|PTHR30309:SF0|SM01207|TIGR00023 MEALZ_RS00445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000905|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|PTHR11735|PTHR11735:SF6|SSF53067|TIGR00329|TIGR03723 MEALZ_RS00450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001911|IPR018278 Ribosomal protein S21|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00358|PD005521|PF01165|PR00976|PS01181|PTHR21109|TIGR00030 MEALZ_RS00455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|PTHR28055|PTHR28055:SF1|SSF89095 MEALZ_RS00460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002694|IPR006171|IPR006295|IPR013173|IPR013264|IPR016136|IPR019475|IPR030846 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA primase DnaG, DnaB-binding domain|DNA primase DnaG, bacteria|DNA primase, DnaB-helicase binding domain|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|Toprim domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270|GO:0016779 G3DSA:1.10.860.10|G3DSA:1.20.50.20|G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF08278|PF10410|PF13155|PIRSF002811|PTHR30313|SM00400|SM00493|SM00766|SSF117023|SSF56731|SSF57783|TIGR01391 MEALZ_RS00465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR007631|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, non-essential domain|RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PF04546|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF0|SSF88659|SSF88946|TIGR02393|TIGR02937 MEALZ_RS00475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|PTHR11964|SSF55973|TIGR01034 MEALZ_RS00480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000043|IPR015878|IPR016040|IPR020082 Adenosylhomocysteinase|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|G3DSA:3.40.50.720|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|PTHR23420|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 MEALZ_RS00485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003171|IPR004620|IPR029041 5,10-methylenetetrahydrofolate reductase|FAD-linked oxidoreductase-like|Methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0006555|GO:0009086|GO:0055114 G3DSA:3.20.20.220|PF02219|PTHR21091|PTHR21091:SF31|SSF51730|TIGR00676 MEALZ_RS00490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|PTHR30027|PTHR30027:SF3|SSF75217|SSF88697|TIGR00046 MEALZ_RS00495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003675 CAAX amino terminal protease GO:0016020 PF02517 MEALZ_RS00500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007551 Protein of unknown function DUF520 G3DSA:3.30.70.860|G3DSA:3.30.70.990|MF_00632|PF04461|PTHR30476|PTHR30476:SF0|SSF89963 MEALZ_RS00505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002646|IPR006674|IPR012006|IPR032828 HD domain|Poly A polymerase, head domain|tRNA nucleotidyltransferase, proteobacteria|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0001680|GO:0003723|GO:0004810|GO:0005524|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_01261|MF_01262|PF01743|PF01966|PF12627|PIRSF000813|PTHR13734|SSF81301|SSF81891 MEALZ_RS00510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF18 MEALZ_RS00515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|PTHR11911|PTHR11911:SF6|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 MEALZ_RS00520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022310|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, N-terminal|Glutamine amidotransferase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PF02540|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF2|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 MEALZ_RS00525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|PTHR11079|SSF53927 MEALZ_RS00530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001672|IPR018189|IPR023096 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, C-terminal|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:1.10.1390.10|G3DSA:3.40.50.10490|MF_00473|PF00342|PR00662|PS00174|PS00765|PTHR11469|PTHR11469:SF4|SSF53697 MEALZ_RS00545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420|SSF49503 MEALZ_RS00555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032818 DedA family PTHR30353|PTHR30353:SF12 MEALZ_RS00565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007372|IPR027016 Lipid/polyisoprenoid-binding, YceI-like|Uncharacterised protein with YceI domain G3DSA:2.40.128.110|PF04264|PIRSF029811|SM00867|SSF101874 MEALZ_RS00570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR011527|IPR011917|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter, lipid A export, MsbA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0034040|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123|TIGR02203 MEALZ_RS00600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF3|TIGR00056 MEALZ_RS00605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF483|SM00382|SSF52540 MEALZ_RS00610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003399 Mce/MlaD PF02470|PTHR36698|PTHR36698:SF2 MEALZ_RS00615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|SSF159594 MEALZ_RS00625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003782|IPR004852|IPR009056|IPR012336 Copper chaperone SCO1/SenC|Cytochrome c-like domain|Di-haem cytochrome c peroxidase|Thioredoxin-like fold GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|G3DSA:3.40.30.10|PF00034|PF02630|PF03150|PTHR30600|PTHR30600:SF7|SSF46626|SSF52833 MEALZ_RS00630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008826|IPR015943 Selenium-binding protein|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0008430 G3DSA:2.130.10.10|PF05694|PTHR23300|SSF75011 MEALZ_RS00635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025336 Protein of unknown function DUF4242 PF14026 MEALZ_RS00640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16925|PTHR30055|PTHR30055:SF20|SSF46689|SSF48498 MEALZ_RS00650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Uncharacterised protein family UPF0001 G3DSA:3.20.20.10|PF01168|PIRSF004848|PS01211|PTHR10146|SSF51419|TIGR00044 MEALZ_RS00655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR003593|IPR006321|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.40.50.300|PF00437|PS00662|PTHR30486|PTHR30486:SF6|SM00382|SSF52540|TIGR01420 MEALZ_RS00660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR003593|IPR006321|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.40.50.300|PF00437|PTHR30486|PTHR30486:SF3|SM00382|SSF52540|TIGR01420 MEALZ_RS00665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001623|IPR007791|IPR029024 Co-chaperone DjlA, N-terminal|DnaJ domain|TerB-like G3DSA:1.10.287.110|G3DSA:1.10.3680.10|PF00226|PF05099|PR00625|PTHR24078|PTHR24078:SF166|SM00271|SSF158682|SSF46565 MEALZ_RS00670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001636|IPR013816|IPR018236|IPR028923 ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0005524|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|PS01058|PTHR11609|PTHR11609:SF6|SSF56104|TIGR00081 MEALZ_RS00675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001405|IPR010994|IPR020891|IPR025657 RadC protein|RadC-like JAB domain|RuvA domain 2-like|Uncharacterised protein family UPF0758, conserved site G3DSA:1.10.150.20|G3DSA:3.40.140.10|PF04002|PS01302|PTHR30471|PTHR30471:SF5|SSF102712|SSF47781|TIGR00608 MEALZ_RS00680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|PTHR14359|PTHR14359:SF20|SSF102645|SSF52507|TIGR00521 MEALZ_RS00685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008180|IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0004170|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00116|PF00692|PTHR11241|SSF51283|TIGR00576 MEALZ_RS00690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF28|SSF53738|SSF55957 MEALZ_RS00695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526|GO:0006561 G3DSA:3.40.1160.10|MF_00082_A|MF_00082_B|PF00696|PIRSF000728|PR00474|PTHR23342|SSF53633|TIGR00761 MEALZ_RS00700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025392 Domain of unknown function DUF4124 PF13511 MEALZ_RS00705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325|PTHR33219|PTHR33219:SF5 MEALZ_RS00710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|PTHR11645|PTHR11645:SF0|SSF48179|SSF51735|TIGR00112 MEALZ_RS00715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR37822|PTHR37822:SF2 MEALZ_RS00720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|PTHR24322:SF57|SSF51735 MEALZ_RS00725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003752|IPR022920|IPR023380 Disulphide bond formation protein DsbB|Disulphide bond formation protein DsbB-like domain|Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 G3DSA:1.20.1550.10|MF_00286|PF02600|PTHR36570|PTHR36570:SF1|SSF158442 MEALZ_RS00730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016980|IPR029063 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PIRSF031679|SSF53335 MEALZ_RS00735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR005259|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0016787|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00271|PF04851|PTHR30580|SM00487|SM00490|SSF52540|TIGR00595 MEALZ_RS00740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|PTHR11956|PTHR11956:SF6|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 MEALZ_RS00745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 MEALZ_RS00760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00134_A|MF_00134_B|PF00218|PS00614|PTHR22854|PTHR22854:SF2|SSF51366 MEALZ_RS00765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000312|IPR005940|IPR017459 Anthranilate phosphoribosyl transferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|MF_00211|PF00591|PF02885|PTHR11922|PTHR11922:SF5|SSF47648|SSF52418|TIGR01245 MEALZ_RS00770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006221|IPR017926|IPR029062 Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0008152 G3DSA:3.40.50.880|PF00117|PR00096|PR00097|PR00099|PTHR11922|PTHR11922:SF7|SSF52317|TIGR00566 MEALZ_RS00775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005256|IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I, PabB-like|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0000162|GO:0004049|GO:0009058|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|PTHR11236:SF9|SSF56322|TIGR00564 MEALZ_RS00780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 G3DSA:3.90.850.10|PF01557|PTHR11820|PTHR11820:SF6|SSF56529 MEALZ_RS00785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 MEALZ_RS00790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF279|SM00448|SM00862|SSF46894|SSF52172 MEALZ_RS00795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PTHR13932|PTHR13932:SF7|SM00729|SSF102114|TIGR00539 MEALZ_RS00800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004588|GO:0006221|GO:0009116 G3DSA:3.40.50.2020|MF_01208|PF00156|PTHR19278|PTHR19278:SF36|SSF53271|TIGR00336 MEALZ_RS00805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022812|IPR027417 Dynamin superfamily|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF00350|SSF52540 MEALZ_RS00810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003358|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 G3DSA:3.40.50.150|MF_01057|PF02390|PTHR23417|PTHR23417:SF14|SSF53335|TIGR00091 MEALZ_RS00820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003749|IPR008867|IPR010035|IPR012675|IPR013785|IPR016155 Aldolase-type TIM barrel|Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1|Thiazole biosynthesis GO:0003824|GO:0009228 G3DSA:3.10.20.30|G3DSA:3.20.20.70|MF_00443|PF02597|PF05690|PTHR34266|PTHR34266:SF2|SSF110399|SSF54285|TIGR01683 MEALZ_RS00825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006218|IPR006219|IPR013785 Aldolase-type TIM barrel|DAHP synthetase I/KDSA|DHAP synthase, class 1 GO:0003824|GO:0003849|GO:0009058|GO:0009073 G3DSA:3.20.20.70|PF00793|PIRSF001361|PTHR21225|PTHR21225:SF7|SSF51569|TIGR00034 MEALZ_RS00830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|SM00382|SSF52540|SSF90123 MEALZ_RS00835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005240|IPR016064 NAD kinase/diacylglycerol kinase-like domain|Protein of unknown function DUF389 PF04087|PTHR20992|PTHR20992:SF9|SSF111331 MEALZ_RS00840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021732 Protein of unknown function DUF3301 PF11743 MEALZ_RS00845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002765 Uncharacterised protein family UPF0145 G3DSA:3.30.110.70|MF_00338|PF01906|PTHR34068|PTHR34068:SF3|SSF117782 MEALZ_RS00850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010710 Protein of unknown function DUF1289 PF06945|PTHR35175 MEALZ_RS00860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 MEALZ_RS00870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021993 Putative metal-binding domain of cation transport ATPase PF12156 MEALZ_RS00885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|PTHR24093|SSF55008|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494|TIGR01511|TIGR01525 MEALZ_RS00890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13386|PTHR42208|PTHR42208:SF1 MEALZ_RS00895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|SM00563|SSF69593 MEALZ_RS00900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005073|IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 G3DSA:3.30.1380.10|PF03411|PIRSF018455|SSF55166 MEALZ_RS00905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008854|IPR022474|IPR025835|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|TPMT family|Thiopurine S-methyltransferase|Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0008757|GO:0010038|GO:0032259 G3DSA:3.40.50.150|MF_00812|PF05724|PIRSF023956|PTHR10259|PTHR10259:SF16|SSF53335|TIGR03840 MEALZ_RS00920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009739 Protein of unknown function DUF1311 PF07007 MEALZ_RS00925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027379 Cardiolipin synthase N-terminal PF13396 MEALZ_RS00955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025166 Domain of unknown function DUF4102 PF13356 MEALZ_RS00960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30629|PTHR30629:SF2|SSF56349 MEALZ_RS00965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019239 Bacterial antitoxin of type II TA system, VapB PF09957 MEALZ_RS00970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR35601|PTHR35601:SF1|SSF143011|TIGR02385 MEALZ_RS00985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS01005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF46689|SSF53098 MEALZ_RS01010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 MEALZ_RS01015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610 MEALZ_RS01020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016 MEALZ_RS01025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR013321|IPR022789 Antitoxin ParD|Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|PF09386|SSF47598 MEALZ_RS01030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006119|IPR006120|IPR009057 Homeodomain-like|Resolvase, HTH domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PF02796|PTHR30461|PTHR30461:SF9|SM00857|SSF53041 MEALZ_RS01035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000212|IPR011578|IPR013498|IPR014016|IPR014017|IPR022161|IPR027417 DNA helicase IV, N-terminal domain|DNA helicase, UvrD/REP type|DNA topoisomerase, type IA, zn finger|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, FokI, C-terminal/endonuclease I, core|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0003916|GO:0004003|GO:0004536|GO:0005524|GO:0005694|GO:0006265|GO:0016787 G3DSA:3.30.65.10|G3DSA:3.40.50.300|G3DSA:3.40.91.30|PF00580|PF01396|PF12462|PF13361|PTHR11070|PTHR11070:SF26|SSF52540|SSF57783 MEALZ_RS01055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|SSF53474 MEALZ_RS01060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011969|IPR021109 Aspartic peptidase domain|Clan AA aspartic peptidase, C-terminal PF13975|SSF50630|TIGR02281 MEALZ_RS01065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 MF_01129|PF03030|PIRSF001265|PTHR31998|PTHR31998:SF0|TIGR01104 MEALZ_RS01070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021074 Formate dehydrogenase, delta subunit PF11390 MEALZ_RS01075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|MF_00187|PF02634|PIRSF015626|PTHR30592|PTHR30592:SF1|SSF53927|TIGR00129 MEALZ_RS01080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006478|IPR006655|IPR006656|IPR006657|IPR009010 Aspartate decarboxylase-like domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0008863|GO:0009055|GO:0015942|GO:0016491|GO:0030151|GO:0055114 G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PS00932|PTHR11615|PTHR11615:SF112|SSF50692|SSF53706|TIGR01591 MEALZ_RS01085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PF02604|SSF143120 MEALZ_RS01090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021799 Protein of unknown function DUF3368 PF11848|PTHR39550 MEALZ_RS01100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|SSF51735 MEALZ_RS01110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 MEALZ_RS01115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:2.40.50.100|PF13437|PF13533|PTHR30386|PTHR30386:SF8 MEALZ_RS01120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR011527|IPR027417 ABC transporter type 1, transmembrane domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PTHR24221|PTHR24221:SF138|SSF52540|SSF90123 MEALZ_RS01125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR003593|IPR007831|IPR027417 AAA+ ATPase domain|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF13|SM00382|SSF160246|SSF52540 MEALZ_RS01130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011044|IPR015943 Quinoprotein amine dehydrogenase, beta chain-like|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PTHR21588|PTHR21588:SF5|SSF50969 MEALZ_RS01135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|PF00719|PS00387|PTHR10286|PTHR10286:SF0|SSF50324 MEALZ_RS01140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677 MEALZ_RS01145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PTHR15362|PTHR15362:SF2|TIGR00473 MEALZ_RS01150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018445 Putative phosphate transport regulator PF01865 MEALZ_RS01160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027372 Phytase-like domain PF13449 MEALZ_RS01175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 G3DSA:3.40.630.10|PF00246|PS00132|SSF53187 MEALZ_RS01180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PTHR10992|SSF53474 MEALZ_RS01185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025906 Putative motility protein PF14070 MEALZ_RS01195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002810|IPR012340 NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|PF01957|PTHR33507|PTHR33507:SF3 MEALZ_RS01200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972|IPR032435 Band 7 domain|Band 7, C-terminal extension|Stomatin family GO:0016020 PF01145|PF16200|PR00721|PTHR10264|PTHR10264:SF27|SM00244|SSF117892 MEALZ_RS01205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972|IPR032435 Band 7 domain|Band 7, C-terminal extension|Stomatin family GO:0016020 PF01145|PF16200|PR00721|PTHR10264|PTHR10264:SF27|SM00244|SSF117892 MEALZ_RS01220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF6|SSF46785|SSF53850 MEALZ_RS01225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|SSF141868 MEALZ_RS01230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010662|IPR029058 Alpha/Beta hydrolase fold|Putative hydrolase RBBP9/YdeN GO:0016787 G3DSA:3.40.50.1820|PF06821|SSF53474 MEALZ_RS01235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005666|IPR008995|IPR017871|IPR024765|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Sulphate transport system permease protein 1|TOBE-like domain GO:0005524|GO:0006810|GO:0016020|GO:0016887|GO:0042626 G3DSA:3.40.50.300|PF00005|PF12857|PS00211|PTHR24220|PTHR24220:SF123|SM00382|SSF50331|SSF52540|TIGR00968 MEALZ_RS01240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR005667|IPR011866 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysW GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF1|SSF161098|TIGR00969|TIGR02140 MEALZ_RS01245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR005667|IPR011865 ABC transporter type 1, transmembrane domain MetI-like|Sulphate ABC transporter permease protein 2|Sulphate ABC transporter, permease protein CysT GO:0006810|GO:0008272|GO:0015116|GO:0015419|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30406|PTHR30406:SF6|SSF161098|TIGR00969|TIGR02139 MEALZ_RS01250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000957|IPR005669 Sulphate/thiosulphate-binding, conserved site|Thiosulphate/Sulfate-binding protein GO:0008271|GO:0008272|GO:0015419|GO:0030288 G3DSA:3.40.190.10|PF13531|PS00757|PTHR30368|PTHR30368:SF2|SSF53850|TIGR00971 MEALZ_RS01255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011250|IPR025388 Alginate export domain|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 G3DSA:2.40.160.20|PF13372 MEALZ_RS01260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006089|IPR006091|IPR009075|IPR009100|IPR013786 Acyl-CoA dehydrogenase, conserved site|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PS00072|PTHR10909|PTHR10909:SF305|SSF47203|SSF56645 MEALZ_RS01265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24095|SSF56801 MEALZ_RS01270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF52777 MEALZ_RS01275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 MEALZ_RS01280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PTHR10617|PTHR10617:SF113|SSF51905 MEALZ_RS01285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|PTHR11712|SM00825|SSF53901 MEALZ_RS01290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016776|IPR029069 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted|HotDog domain G3DSA:3.10.129.10|PIRSF020565|SSF54637 MEALZ_RS01295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR011285|IPR016040 3-oxoacyl-(acyl-carrier-protein) reductase, putative|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PTHR24322|SM00822|SSF51735|TIGR01831 MEALZ_RS01300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|PTHR11712|SM00825|SSF53901 MEALZ_RS01305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011611|IPR017583|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like|Tagatose/fructose phosphokinase GO:0005975|GO:0016773 G3DSA:3.40.1190.20|PF00294|PIRSF000535|PTHR10584|PTHR10584:SF170|SSF53613|TIGR03168 MEALZ_RS01310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012912|IPR024047 Plasmid pRiA4b, Orf3|Protein MM3350-like domain G3DSA:3.10.290.30|PF07929|SSF159941 MEALZ_RS01315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR021796|IPR029787 GGDEF domain|Nucleotide cyclase|Protein of unknown function DUF3365 G3DSA:3.30.70.270|PF00990|PF11845|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 MEALZ_RS01320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002763 Protein of unknown function DUF72 G3DSA:3.20.20.410|PF01904|PTHR30348|SSF117396 MEALZ_RS01325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 PF01139|PS01288|PTHR11118|PTHR11118:SF1|SSF103365 MEALZ_RS01330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002804|IPR023572 Archease|Archease domain G3DSA:3.55.10.10|PD012969|PF01951|PTHR12682|SSF69819 MEALZ_RS01335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00411|PTHR10632|PTHR10632:SF2|SSF51905 MEALZ_RS01345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 PF01654|PTHR30365|PTHR30365:SF0 MEALZ_RS01350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PF02322|PIRSF000267|PTHR30365|PTHR30365:SF6|TIGR00203 MEALZ_RS01360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001638|IPR003607|IPR006674|IPR029151 HD domain|HD/PDEase domain|Periplasmic sensor domain-like|Solute-binding protein family 3/N-terminal domain of MltF G3DSA:1.10.3210.10|G3DSA:3.30.450.20|G3DSA:3.40.190.10|PF00497|PF13487|SM00062|SM00471|SSF103190|SSF109604|SSF53850 MEALZ_RS01365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417|IPR033186 Helicase HerA-like C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05872|PTHR30121|PTHR30121:SF3|SSF52540 MEALZ_RS01370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279|IPR004039 Metallo-beta-lactamase|Rubredoxin-type fold G3DSA:2.20.28.10|G3DSA:3.60.15.10|SM00849|SSF56281|SSF57802 MEALZ_RS01375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF1|SSF143744 MEALZ_RS01380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000362|IPR005677|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate hydratase, class II|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004333|GO:0006099|GO:0006106|GO:0016829|GO:0045239 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00743|PF00206|PF10415|PR00149|PS00163|PTHR11444|PTHR11444:SF1|SSF48557|TIGR00979 MEALZ_RS01385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008331|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|SSF47240 MEALZ_RS01390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001604|IPR020821 DNA/RNA non-specific endonuclease|Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 G3DSA:3.40.570.10|PF01223|PTHR13966|SM00477|SM00892|SSF54060 MEALZ_RS01395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012037|IPR027787|IPR027788 Alpha/beta-hydrolase family|Alpha/beta-hydrolase, N-terminal domain|Alpha/beta-hydrolase, catalytic domain PF10081|PF15420|PIRSF007542 MEALZ_RS01400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022118 Peptidase C70, AvrRpt2 PF12385 MEALZ_RS01405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|PTHR18968|PTHR18968:SF40|SSF52518 MEALZ_RS01410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002869|IPR002880|IPR009014|IPR019752|IPR022367|IPR029061 2-oxoacid:acceptor oxidoreductase, alpha subunit|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF01855|PTHR32154|PTHR32154:SF20|SSF52518|SSF52922|SSF53323|TIGR03710 MEALZ_RS01420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 PF02452|PTHR33988|SSF50118 MEALZ_RS01425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007159 SpoVT-AbrB domain GO:0003677 G3DSA:2.10.260.10|SM00966|SSF89447 MEALZ_RS01430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712|IPR009614 Toxin YoeB|Toxin-antitoxin system, RelE/ParE toxin family GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116|TIGR02385 MEALZ_RS01435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 MEALZ_RS01440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032581 Protein of unknown function DUF4917 PF16263 MEALZ_RS01450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019270 Protein of unknown function DUF2283 PF10049|PTHR37029|PTHR37029:SF1 MEALZ_RS01455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|SSF54611 MEALZ_RS01460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 MEALZ_RS01465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009241 Toxin HigB-like PF05973 MEALZ_RS01475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018841 Protein of unknown function DUF2442 G3DSA:3.30.2020.10|PF10387|SSF143880 MEALZ_RS01480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000788|IPR013344 Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0031419|GO:0055114 PF02867|PR01183|PTHR11573|PTHR11573:SF3|SSF51998|TIGR02504 MEALZ_RS01485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000330|IPR001650|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain GO:0005524 G3DSA:3.40.50.300|PF00176|PF00271|PTHR10799|SM00487|SM00490|SSF52540 MEALZ_RS01490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025874 Double zinc ribbon PF12773 MEALZ_RS01500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000523|IPR001208|IPR003593|IPR004482|IPR014721|IPR020568|IPR025158|IPR025943|IPR027417 AAA+ ATPase domain|MCM domain|Magnesium chelatase ChlI domain|Mg chelatase-related protein|Mg chelatase-related protein, C-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Sigma-54 interaction domain, ATP-binding site 2 GO:0003677|GO:0005524|GO:0006260 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF01078|PF13335|PF13541|PR01657|PS00676|PTHR32039|PTHR32039:SF7|SM00382|SSF52540|SSF54211|TIGR00368 MEALZ_RS01505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007475 Membrane fusogenic activity PF04380|PTHR38040|PTHR38040:SF1 MEALZ_RS01510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|PR00598|PS01117|PTHR33164|SM00347|SSF46785 MEALZ_RS01515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 G3DSA:3.30.70.330|SSF54928 MEALZ_RS01520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000573|IPR001030|IPR006249|IPR015928|IPR015931|IPR015932|IPR015937|IPR018136 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/Iron-responsive element-binding protein 2|Aconitase/isopropylmalate dehydratase GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF00694|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF1|SSF52016|SSF53732|TIGR01341 MEALZ_RS01525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PR00943|PS00154|PTHR24093|PTHR24093:SF332|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 MEALZ_RS01530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 MEALZ_RS01535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009614 Toxin YoeB GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116 MEALZ_RS01540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010292 Uncharacterised protein family CreA PF05981|PIRSF003174|PTHR37952|PTHR37952:SF2 MEALZ_RS01545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00688|PTHR32071|SM00382|SSF46689|SSF52540 MEALZ_RS01550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 G3DSA:3.40.1050.10|PF00484|PTHR11002|PTHR11002:SF9|SM00947|SSF53056 MEALZ_RS01555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR13355|PTHR13355:SF8|SSF55729 MEALZ_RS01560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 MEALZ_RS01570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002931|IPR021878|IPR025403 Domain of unknown function DUF4129|Protein of unknown function DUF3488|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF11992|PF13559|PTHR33490|PTHR33490:SF4|SM00460|SSF54001 MEALZ_RS01575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR34351|PTHR34351:SF1 MEALZ_RS01580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR011703|IPR016366|IPR027417 AAA+ ATPase domain|ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF155|SM00382|SSF52540 MEALZ_RS01585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000962|IPR020458 Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site GO:0008270 PF01258|PS01102|PTHR33823|SSF109635|SSF57716 MEALZ_RS01595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PR00368|PR00411|PS01280|PS01281|PTHR11806|PTHR11806:SF0|SM01228|SSF51905|TIGR00136 MEALZ_RS01600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|PIRSF003078|PTHR31760|PTHR31760:SF0|SSF53335|TIGR00138 MEALZ_RS01605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 MEALZ_RS01610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003115|IPR004437|IPR011991 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|G3DSA:3.90.1530.10|PF02195|PTHR33375|SM00470|SSF110849|TIGR00180 MEALZ_RS01615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005598 ATP synthase protein I PF03899 MEALZ_RS01620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000568|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|PTHR11410:SF7|SSF81336|TIGR01131 MEALZ_RS01625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, DCCD-binding site|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PS00605|SSF81333|TIGR01260 MEALZ_RS01630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002146|IPR005864|IPR028987 ATPase, F0 complex, subunit B, bacterial|ATPase, F0 complex, subunit B/B', bacterial/chloroplast|F-type ATP synthase subunit B-like, membrane domain GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.5.620|MF_01398|PF00430|PTHR33445|SSF81573|TIGR01144 MEALZ_RS01635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000711|IPR026015 ATPase, OSCP/delta subunit|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|PTHR11910|SSF47928|TIGR01145 MEALZ_RS01640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962 MEALZ_RS01645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000131|IPR023632|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit conserved site|ATPase, F1 complex, gamma subunit domain GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|MF_00815|PF00231|PR00126|PS00153|PTHR11693|SSF52943|TIGR01146 MEALZ_RS01650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR000793|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF44|SSF47917|SSF50615|SSF52540|TIGR01039 MEALZ_RS01655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001469|IPR020546|IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain|ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF00401|PF02823|PTHR13822|SSF46604|SSF51344|TIGR01216 MEALZ_RS01660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PS00101|PTHR22572|PTHR22572:SF115|SSF51161|SSF53448|TIGR01173 MEALZ_RS01665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0005975|GO:0030246|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|PTHR10937|PTHR10937:SF0|SSF53697|SSF56235|TIGR01135 MEALZ_RS01670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SM00530|SSF47413 MEALZ_RS01675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029060 PIN domain-like G3DSA:3.40.50.1010|SSF88723 MEALZ_RS01680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009061|IPR010093|IPR011991 Putative DNA-binding domain|SinI-like, DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF12728|SSF46955|TIGR01764 MEALZ_RS01690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|SSF116734 MEALZ_RS01695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF116734 MEALZ_RS01700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007409|IPR021810 Protein of unknown function DUF3387|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PF04313|PF11867|PTHR30195|PTHR30195:SF15 MEALZ_RS01705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011045|IPR015943 Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|SSF50974 MEALZ_RS01710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012440 Protein of unknown function DUF1641 PF07849 MEALZ_RS01715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PTHR10632|PTHR10632:SF8|SSF51905 MEALZ_RS01720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010693 Divergent 4Fe-4S mono-cluster G3DSA:3.30.70.20|PF06902|SSF54862 MEALZ_RS01725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025336 Protein of unknown function DUF4242 PF14026 MEALZ_RS01730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 MEALZ_RS01735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF16925|PTHR30055|PTHR30055:SF20|SSF46689|SSF48498 MEALZ_RS01740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF3|SSF56954|TIGR01845 MEALZ_RS01745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002321|IPR010980 Cytochrome c, class II|Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 G3DSA:1.20.120.10|PF01322|SSF47175 MEALZ_RS01750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 MEALZ_RS01755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489 MEALZ_RS01760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|SSF111369|TIGR01730 MEALZ_RS01765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR013570|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator YsiA, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF08359|PTHR30055|SSF46689|SSF48498 MEALZ_RS01770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007298 Copper resistance lipoprotein NlpE PF04170 MEALZ_RS01775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|PTHR11579|SSF53335|TIGR00080 MEALZ_RS01780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000868 Isochorismatase-like GO:0003824|GO:0008152 G3DSA:3.40.50.850|PF00857|PTHR11080|PTHR11080:SF2|SSF52499 MEALZ_RS01785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002638|IPR006405|IPR007229 Nicotinate phosphoribosyltransferase family|Nicotinate phosphoribosyltransferase pncB-type|Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0004516|GO:0009435|GO:0019358 G3DSA:3.20.140.10|PF04095|PIRSF000484|PTHR11098|PTHR11098:SF1|SSF51690|SSF54675|TIGR01513 MEALZ_RS01790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019534 Protein of unknown function DUF2452 PF10504 MEALZ_RS01800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR009351|IPR011545|IPR011991|IPR013701|IPR014001|IPR027417 DEAD/DEAH box helicase domain|DEAD/H associated|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF1006|Winged helix-turn-helix DNA-binding domain GO:0003676|GO:0005524|GO:0016818 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF00270|PF00271|PF06224|PF08494|PTHR24031|PTHR24031:SF122|SM00487|SM00490|SSF52540 MEALZ_RS01815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417|IPR028622 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase RhlE|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0004004|GO:0005524|GO:0042255 G3DSA:3.40.50.300|MF_00968|PF00270|PF00271|PS00039|PTHR24031|PTHR24031:SF0|SM00487|SM00490|SSF52540 MEALZ_RS01825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|PTHR23117|PTHR23117:SF13|SM00072|SSF52540|TIGR03263 MEALZ_RS01835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.90.1200.10|PF01636|SSF56112 MEALZ_RS01840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753|IPR028348 FAD dependent protein|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PIRSF038984|PTHR10617|PTHR10617:SF52|SSF51905 MEALZ_RS01845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013130 Ferric reductase transmembrane component-like domain PF01794|PTHR36964 MEALZ_RS01850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000103|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|SSF51905 MEALZ_RS01855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002081|IPR005101|IPR006050|IPR014729|IPR018394 Cryptochrome/DNA photolyase class 1|Cryptochrome/DNA photolyase class 1, conserved site, C-terminal|Cryptochrome/DNA photolyase, FAD-binding domain|DNA photolyase, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:1.10.579.10|G3DSA:1.25.40.80|G3DSA:3.40.50.620|PF00875|PF03441|PR00147|PS00394|PS00691|PTHR11455|PTHR11455:SF18|SSF48173|SSF52425 MEALZ_RS01860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000566|IPR002446|IPR011038|IPR012674|IPR022271|IPR022272 Calycin|Calycin-like|Lipocalin family conserved site|Lipocalin, ApoD type|Lipocalin, bacterial|Lipocalin/cytosolic fatty-acid binding domain GO:0005215 G3DSA:2.40.128.20|PF08212|PIRSF036893|PR01171|PS00213|PTHR10612|SSF50814 MEALZ_RS01865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF55961 MEALZ_RS01870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010865 Protein of unknown function DUF1499 PF07386|PIRSF026426|PTHR34801|PTHR34801:SF2 MEALZ_RS01875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007553|IPR013560|IPR017087 Domain of unknown function DUF1722|Domain of unknown function DUF523|Uncharacterised conserved protein UCP037004 PF04463|PF08349|PIRSF037004|PTHR30087|PTHR30087:SF0 MEALZ_RS01880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|PTHR22911|SSF103481 MEALZ_RS01890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004509|IPR010994 Competence protein ComEA, helix-hairpin-helix domain|RuvA domain 2-like G3DSA:1.10.150.280|PF12836|PTHR21180|SSF47781|TIGR00426 MEALZ_RS01895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.100|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|PTHR11374|PTHR11374:SF18|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 MEALZ_RS01900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF5|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 MEALZ_RS01905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001098|IPR002298|IPR002421|IPR002562|IPR008918|IPR012337|IPR018320|IPR019760|IPR020045|IPR020046|IPR029060 3'-5' exonuclease domain|5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase 1|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006139|GO:0006260|GO:0006261|GO:0008408 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF01612|PF02739|PR00868|PS00447|PTHR10133|PTHR10133:SF27|SM00279|SM00474|SM00475|SM00482|SSF47807|SSF53098|SSF56672|SSF88723|TIGR00593 MEALZ_RS01910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SSF109604 MEALZ_RS01915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|PTHR12553:SF29|SM00849|SSF56281 MEALZ_RS01920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0000917|GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|PTHR11649|SSF52540|TIGR03598 MEALZ_RS01925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF13442|PIRSF000005|PTHR33751|PTHR33751:SF3|SSF46626 MEALZ_RS01935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001853|IPR012336|IPR017937|IPR023205 DSBA-like thioredoxin domain|Thiol:disulphide interchange protein DsbA/DsbL|Thioredoxin, conserved site|Thioredoxin-like fold GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF01323|PIRSF001488|PS00194|PTHR35891|PTHR35891:SF2|SSF52833 MEALZ_RS01940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 MEALZ_RS01950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004175|IPR009097 RNA 2',3'-cyclic phosphodiesterase|RNA ligase/cyclic nucleotide phosphodiesterase GO:0004113|GO:0008664 G3DSA:3.90.1140.10|MF_01940|PF13563|PTHR35561|PTHR35561:SF1|SSF55144|TIGR02258 MEALZ_RS01955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 MF_00378|PF02601|PF13742|PTHR30008|PTHR30008:SF0|TIGR00237 MEALZ_RS01960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009926|IPR012349|IPR023787 FMN-binding split barrel|Type III secretion system flagellar brake protein YcgR|Type III secretion system flagellar brake protein YcgR, N-terminal GO:0010181|GO:0016491|GO:0035438|GO:0055114|GO:0071945 G3DSA:2.30.110.10|G3DSA:2.40.10.220|MF_01457|PF07317 MEALZ_RS01965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000390 Small multidrug resistance protein family GO:0016021 PF00893|PTHR30561|PTHR30561:SF0|SSF103481 MEALZ_RS01970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007215|IPR027396 DsrEFH-like|Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 G3DSA:3.40.1260.10|PF04077|SSF75169|TIGR03011 MEALZ_RS01975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007453|IPR025526 DsrC-like domain|Sulphur transfer protein DsrC/TusE G3DSA:1.10.10.370|G3DSA:3.30.1420.10|PF04358|PIRSF006223|PTHR37010|PTHR37010:SF1|SSF69721|TIGR03342 MEALZ_RS01980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002942|IPR025708 Heat shock protein 15|RNA-binding S4 domain GO:0003677|GO:0003723|GO:0003727|GO:0034605|GO:0043023 G3DSA:3.10.290.10|PF01479|PIRSF016821|PTHR11079|PTHR11079:SF70|SM00363|SSF55174 MEALZ_RS01985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|SM00450|SSF52821 MEALZ_RS01995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003148|IPR013099|IPR016040 NAD(P)-binding domain|Potassium channel domain|Regulator of K+ conductance, N-terminal GO:0006813 G3DSA:1.10.287.70|G3DSA:3.40.50.720|PF02254|PF07885|PTHR16254|PTHR16254:SF21|SSF51735|SSF81324 MEALZ_RS02000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|PTHR30426|TIGR00216 MEALZ_RS02005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005493|IPR010203 Regulator of ribonuclease activity A|Ribonuclease E inhibitor RraA/RraA-like protein GO:0008428|GO:0051252 G3DSA:3.50.30.40|PF03737|PTHR33254|PTHR33254:SF4|SSF89562|TIGR01935 MEALZ_RS02010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR033479 Double Cache domain 1 PF02743 MEALZ_RS02015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001539|IPR032525 Peptidase U32|Peptidase family U32, C-terminal GO:0006508|GO:0008233 PF01136|PF16325|PS01276|PTHR30217|PTHR30217:SF6 MEALZ_RS02020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003732|IPR023509 D-Tyr tRNAtyr deacylase-like domain|D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 G3DSA:3.50.80.10|MF_00518|PF02580|PTHR10472|SSF69500|TIGR00256 MEALZ_RS02025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016071|IPR025392 Domain of unknown function DUF4124|Staphylococcal nuclease (SNase-like), OB-fold G3DSA:2.40.50.90|PF00565|PF13511|PTHR12302|PTHR12302:SF0|SM00318|SSF50199 MEALZ_RS02040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018640 Putative DNA-binding domain, bacteria PF09836 MEALZ_RS02045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007801|IPR013022 Uncharacterised protein family UPF0276|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|MF_00697|PF05114|PTHR42194|PTHR42194:SF1|SSF51658 MEALZ_RS02060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000445|IPR003265|IPR003583|IPR003651|IPR004035|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III, iron-sulphur binding site|Endonuclease III-like, conserved site-2|Endonuclease III-like, iron-sulphur cluster loop motif|Helix-hairpin-helix DNA-binding motif, class 1|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284|GO:0051539 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PF10576|PIRSF001435|PS00764|PS01155|PTHR10359|PTHR10359:SF18|SM00278|SM00478|SM00525|SSF48150|TIGR01083 MEALZ_RS02065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003667|IPR010968 Electron transport complex, RsxE|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00478|PF02508|PIRSF006102|PTHR30586|PTHR30586:SF0|TIGR01948 MEALZ_RS02070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007329|IPR010209 Electron transport complex, subunit RnfG/RsxG|FMN-binding GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900 MF_00479|PF04205|PIRSF006091|PTHR36118|PTHR36118:SF1|SM00900|TIGR01947 MEALZ_RS02075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004338|IPR011303 Electron transport complex, subunit RnfD/RsxD|NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020|GO:0016021|GO:0022900 MF_00462|PF03116|PTHR30578|PTHR30578:SF0|TIGR01946 MEALZ_RS02080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009051|IPR010208|IPR011538|IPR017900|IPR019554|IPR026902 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Electron transport complex, subunit RnfC/RsxC|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|RnfC Barrel sandwich hybrid domain|Soluble ligand binding domain GO:0009055|GO:0016020|GO:0051536|GO:0051539 G3DSA:1.10.1060.10|MF_00461|PF01512|PF10531|PF13375|PS00198|PTHR11780|PTHR11780:SF1|SSF142019|SSF46548|TIGR01945 MEALZ_RS02085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007202|IPR010207|IPR016463|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Electron transport complex, RnfB/RsxB|Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0009055|GO:0022900|GO:0051536 G3DSA:3.30.70.20|MF_00463|PF04060|PF14697|PIRSF005784|PS00198|PTHR11938|PTHR11938:SF64|SSF54862|TIGR01944 MEALZ_RS02090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003667|IPR011293 Electron transport complex, subunit RnfA/RsxA|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00459|PF02508|PIRSF006102|PTHR30335|PTHR30335:SF0|TIGR01943 MEALZ_RS02095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001765|IPR001902|IPR011547 Carbonic anhydrase|SLC26A/SulP transporter|SLC26A/SulP transporter domain GO:0004089|GO:0008270|GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.40.1050.10|PF00484|PF00916|PTHR11814|PTHR11814:SF123|SM00947|SSF53056 MEALZ_RS02105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006368|IPR016040 GDP-mannose 4,6-dehydratase|NAD(P)-binding domain GO:0008446|GO:0019673 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00955|PF16363|PTHR10366|PTHR10366:SF32|SSF51735|TIGR01472 MEALZ_RS02110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001509|IPR016040|IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0009226|GO:0016491|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|MF_00956|PF01370|PTHR10366|PTHR10366:SF246|SSF51735 MEALZ_RS02115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|G3DSA:3.90.1440.10|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|PTHR30612|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 MEALZ_RS02120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000811|IPR011833 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|PTHR11468|PTHR11468:SF3|SSF53756|TIGR02093 MEALZ_RS02125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|PTHR12029|PTHR12029:SF31|SSF75217 MEALZ_RS02130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008490|IPR025668 Transposase DDE domain|Transposase InsH, N-terminal PF05598|PF13751|PTHR33408|PTHR33408:SF2 MEALZ_RS02135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|PTHR11728|PTHR11728:SF1|SSF48179|SSF51735 MEALZ_RS02140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 G3DSA:3.10.420.10|MF_00821|PF02556|PR01594|PTHR36918|PTHR36918:SF1|SSF54611|TIGR00809 MEALZ_RS02145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR12231|PTHR12231:SF138|SM00450|SSF52821 MEALZ_RS02150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|SM00418|SSF46785 MEALZ_RS02155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|PTHR21666:SF213|SSF51261 MEALZ_RS02160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|PTHR32060|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 MEALZ_RS02165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002509|IPR006837|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|Protein of unknown function DUF610, YibQ GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF04748|PTHR30105|SSF88713 MEALZ_RS02175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018713 Domain of unknown function DUF2236 PF09995|PTHR37539|PTHR37539:SF2 MEALZ_RS02185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PTHR26402|PTHR26402:SF495|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 MEALZ_RS02190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016040|IPR020828|IPR020829|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0016620|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PTHR10836|PTHR10836:SF50|SM00846|SSF51735|SSF55347 MEALZ_RS02200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002734|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|PF01872|SSF53597 MEALZ_RS02205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021339 Protein of unknown function DUF2956 PF11169 MEALZ_RS02210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002355|IPR008972|IPR011706|IPR011707|IPR033138 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Multicopper oxidases, conserved site GO:0005507|GO:0016491|GO:0055114 PF07731|PF07732|PS00079|PS00080|SSF49503 MEALZ_RS02215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008972|IPR011045|IPR015943 Cupredoxin|Nitrous oxide reductase, N-terminal|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|G3DSA:2.60.40.420|SSF49503|SSF50974 MEALZ_RS02220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006091|IPR009075|IPR009100|IPR013786|IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain|Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0008152|GO:0016627|GO:0033539|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF00441|PF02770|PF02771|PF09317|PTHR10909|PTHR10909:SF283|SSF47203|SSF56645 MEALZ_RS02225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001753|IPR006108|IPR006176|IPR008927|IPR013328|IPR016040|IPR029045 3-hydroxyacyl-CoA dehydrogenase, C-terminal|3-hydroxyacyl-CoA dehydrogenase, NAD binding|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|ClpP/crotonase-like domain|Crotonase superfamily|NAD(P)-binding domain GO:0003824|GO:0003857|GO:0006631|GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|G3DSA:3.90.226.10|PF00378|PF00725|PF02737|PTHR23309|PTHR23309:SF2|SSF48179|SSF51735|SSF52096 MEALZ_RS02230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002155|IPR016039|IPR020613|IPR020615|IPR020616|IPR020617 Thiolase|Thiolase, C-terminal|Thiolase, N-terminal|Thiolase, acyl-enzyme intermediate active site|Thiolase, conserved site|Thiolase-like GO:0003824|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00108|PF02803|PIRSF000429|PS00098|PS00737|PTHR18919|SSF53901|TIGR01930 MEALZ_RS02235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR11614|PTHR11614:SF89|SSF53474 MEALZ_RS02245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR003593|IPR006321|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Pilus retraction protein PilT|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.40.50.300|PF00437|PTHR30486|PTHR30486:SF3|SM00382|SSF52540|TIGR01420 MEALZ_RS02250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004506|IPR014729|IPR020536 Rossmann-like alpha/beta/alpha sandwich fold|Thil, AANH domain|tRNA-specific 2-thiouridylase GO:0004810|GO:0008033|GO:0016740 G3DSA:3.40.50.620|PF02568|PTHR11933|PTHR11933:SF6|SSF52402 MEALZ_RS02255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PTHR33279|SSF64307 MEALZ_RS02260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002524|IPR027469|IPR027470 Cation efflux protein|Cation efflux protein transmembrane domain|Cation efflux protein, cytoplasmic domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|G3DSA:3.30.70.1350|PF01545|PF16916|PTHR11562|PTHR11562:SF18|SSF160240|SSF161111|TIGR01297 MEALZ_RS02265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|PTHR23100|PTHR23100:SF0|SSF56266|TIGR00120 MEALZ_RS02270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003561|IPR003733|IPR013785|IPR015797|IPR020476|IPR022998|IPR029119 Aldolase-type TIM barrel|MutY, C-terminal|Mutator MutT|NUDIX hydrolase|NUDIX hydrolase domain-like|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0006281|GO:0008413|GO:0009228|GO:0016787 G3DSA:3.20.20.70|G3DSA:3.90.79.10|PF02581|PF14815|PR00502|PTHR22769|PTHR22769:SF35|SSF51391|SSF55811|TIGR00586 MEALZ_RS02275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 MEALZ_RS02285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR022789 Antitoxin ParD|Ribbon-helix-helix GO:0006355 PF03693|PTHR36582|SSF47598|TIGR02606 MEALZ_RS02290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016 MEALZ_RS02295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36924|PTHR36924:SF1|SSF47413|TIGR02607 MEALZ_RS02300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007711 Toxin HigB-1 PF05015|PTHR40266|PTHR40266:SF2|SSF143011 MEALZ_RS02305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PS00409|SSF54523 MEALZ_RS02315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021330 Protein of unknown function DUF2939 PF11159 MEALZ_RS02330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR003593|IPR007831|IPR009875|IPR027417 AAA+ ATPase domain|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|PilZ domain|Type II secretion system protein E GO:0005524|GO:0006810|GO:0035438 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PF07238|PS00662|PTHR30258|PTHR30258:SF2|SM00382|SSF141371|SSF160246|SSF52540 MEALZ_RS02335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain PF00482|PR00812|PTHR30012|PTHR30012:SF0 MEALZ_RS02350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001775|IPR004846|IPR021844 GspD/PilQ family|Integrating conjugative element protein, PFL4704|Type II/III secretion system GO:0009306 PF00263|PF11920|PR00811|PTHR30332 MEALZ_RS02355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005546 Autotransporter beta-domain SSF103515 MEALZ_RS02370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PS00409|TIGR02532 MEALZ_RS02375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|PTHR36966|PTHR36966:SF1|SM01321|SSF143422 MEALZ_RS02385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PS00409 MEALZ_RS02390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR011703|IPR016366|IPR027417 AAA+ ATPase domain|ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF155|SM00382|SSF52540 MEALZ_RS02395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR34351|PTHR34351:SF1 MEALZ_RS02400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002931|IPR021878|IPR025403 Domain of unknown function DUF4129|Protein of unknown function DUF3488|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF11992|PF13559|PTHR33490|PTHR33490:SF4|SM00460|SSF54001 MEALZ_RS02405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|SSF88713 MEALZ_RS02410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001395|IPR020471|IPR023210 Aldo/keto reductase|Aldo/keto reductase/potassium channel subunit beta|NADP-dependent oxidoreductase domain GO:0016491|GO:0055114 G3DSA:3.20.20.100|PF00248|PR00069|PTHR11732|PTHR11732:SF198|SSF51430 MEALZ_RS02415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001398|IPR014347 Macrophage migration inhibitory factor|Tautomerase/MIF superfamily G3DSA:3.30.429.10|PD004816|PF01187|PTHR11954|SSF55331 MEALZ_RS02420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002187|IPR011322|IPR015867 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|SM00938|SSF54913 MEALZ_RS02425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003148|IPR006037|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF00999|PF02254|PTHR16254|SSF116726|SSF51735 MEALZ_RS02430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002616|IPR004803 Queuine tRNA-ribosyltransferase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008033|GO:0008479|GO:0008616 G3DSA:3.20.20.105|MF_00168|PF01702|PTHR21148|PTHR21148:SF26|SSF51713|TIGR00430|TIGR00449 MEALZ_RS02435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|PTHR33909|PTHR33909:SF1|SM01323|TIGR00739 MEALZ_RS02440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR005791|IPR022645|IPR022646|IPR022813|IPR027398 Acriflavin resistance protein|Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|SecD export protein N-terminal TM domain GO:0005215|GO:0006810|GO:0006886|GO:0015450|GO:0016020 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PF13721|PR00702|PTHR30081|PTHR30081:SF1|SSF82866|TIGR00916|TIGR01129 MEALZ_RS02445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|PTHR30081|SSF82866|TIGR00916|TIGR00966 MEALZ_RS02450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS02455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS02460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001564|IPR023005 Nucleoside diphosphate kinase|Nucleoside diphosphate kinase, active site GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 G3DSA:3.30.70.141|MF_00451|PF00334|PR01243|PS00469|PTHR11349|SM00562|SSF54919 MEALZ_RS02465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|PTHR30544|PTHR30544:SF5|SSF102114|TIGR00048 MEALZ_RS02470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR013360|IPR019734 Pilus biogenesis/stability type IV, PilW|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13431|PTHR23083|SM00028|SSF48452|TIGR02521 MEALZ_RS02475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF9|SSF52954|SSF55681|TIGR00442 MEALZ_RS02485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR018704|IPR026039 Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain|Uncharacterised protein family UPF0070 GO:0005515 G3DSA:1.25.40.10|PF09976|PIRSF006170|PTHR38035|SSF48452 MEALZ_RS02490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002372|IPR011047|IPR017687|IPR018391|IPR027295 Outer membrane protein assembly factor BamB|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily G3DSA:2.140.10.10|MF_00923|PF13360|PTHR32303|PTHR32303:SF8|SM00564|SSF50998|TIGR03300 MEALZ_RS02495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 AAA+ ATPase domain|GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|PTHR11649|PTHR11649:SF5|SM00382|SSF52540|TIGR00231|TIGR03594 MEALZ_RS02500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772|GO:0019825|GO:0020037 G3DSA:1.10.287.130|G3DSA:1.10.490.10|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF11563|PF13426|PR00344|PTHR24423|PTHR24423:SF518|SM00086|SM00091|SM00387|SM00388|SSF46458|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS02505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF539|SM00448|SSF52172 MEALZ_RS02510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PTHR10799|PTHR10799:SF774|SM00052|SM00267|SM00448|SSF141868|SSF52172|SSF55073|TIGR00254 MEALZ_RS02515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS02520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001602 Uncharacterised protein family UPF0047 G3DSA:2.60.120.460|PF01894|PIRSF004681|PTHR30615|SSF111038|TIGR00149 MEALZ_RS02525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007332|IPR012336 Protein of unknown function DUF411|Thioredoxin-like fold PF04214|SSF52833 MEALZ_RS02535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006980|IPR023349 Ammonia monooxygenase/particulate methane monooxygenase, subunit C|Ammonia monooxygenase/particulate methane monooxygenase, subunit C domain G3DSA:1.20.1050.50|PF04896|TIGR03078 MEALZ_RS02540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003393 Ammonia monooxygenase/particulate methane monooxygenase, subunit A G3DSA:1.20.1450.10|PF02461|TIGR03080 MEALZ_RS02545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006833|IPR023141|IPR023301|IPR023303 Ammonia monooxygenase/particulate methane monooxygenase, subunit B|Ammonia/methane monooxygenase, subunit B, C-terminal|Ammonia/methane monooxygenase, subunit B, helix hairpin domain|Ammonia/methane monooxygenase, subunitB, N-terminal G3DSA:1.10.287.710|G3DSA:2.60.120.570|G3DSA:2.60.40.1580|PF04744|TIGR03079 MEALZ_RS02550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007263|IPR011020 HTTM|Protein of unknown function DUF393 PF04134|SM00752 MEALZ_RS02565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021344 Protein of unknown function DUF2970 PF11174 MEALZ_RS02570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000489|IPR003726|IPR003759|IPR004223|IPR006158|IPR011005|IPR011822 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Cobalamin-dependent methionine synthase|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain|Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.10.196.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PF02965|PIRSF000381|PTHR21091|PTHR21091:SF111|SM01018|SSF47644|SSF51717|SSF52242|SSF56507|SSF82282|TIGR02082 MEALZ_RS02575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005134|IPR020761|IPR020765 Uncharacterised protein family UPF0114|Uncharacterised protein family UPF0114, bacteria|Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MF_00143|PF03350|PTHR38596|PTHR38596:SF1|TIGR00645 MEALZ_RS02580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008554|IPR012336 Glutaredoxin-like|Thioredoxin-like fold G3DSA:3.40.30.10|PF05768|PTHR34386|PTHR34386:SF2|SSF52833 MEALZ_RS02585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 MEALZ_RS02590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018636 Protein of unknown function DUF2058 PF09831 MEALZ_RS02595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 PF01699|PTHR10846|TIGR00367 MEALZ_RS02600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007698|IPR007886|IPR008141|IPR016040|IPR023753 Alanine dehydrogenase|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|FAD/NAD(P)-binding domain|NAD(P)-binding domain GO:0000286|GO:0016491|GO:0042853|GO:0055114 G3DSA:3.40.50.1770|G3DSA:3.50.50.60|PF01262|PF05222|PIRSF000183|PTHR10160|SM01002|SM01003|SSF51735|SSF52283|TIGR00518 MEALZ_RS02620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001236|IPR001557|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0016491|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|PF00056|PF02866|PIRSF000102|PR00086|PTHR11540|PTHR11540:SF3|SSF51735|SSF56327 MEALZ_RS02625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PF14667|PTHR30250|PTHR30250:SF8 MEALZ_RS02635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF589|SM00382|SSF52540 MEALZ_RS02640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF0|SSF161098 MEALZ_RS02645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|SSF53850 MEALZ_RS02650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_01225_B|PF04055|PF06463|PF13353|PS01305|PTHR22960|SM00729|SSF102114|TIGR02666 MEALZ_RS02655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PTHR24031|PTHR24031:SF0|SM00487|SM00490|SSF52540 MEALZ_RS02660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 PF03977|PIRSF015658|PTHR35806|TIGR01109 MEALZ_RS02665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000089|IPR000891|IPR001882|IPR003379|IPR005776|IPR011053|IPR013785 Aldolase-type TIM barrel|Biotin-binding site|Biotin/lipoyl attachment|Carboxylase, conserved domain|Oxaloacetate decarboxylase, alpha subunit|Pyruvate carboxyltransferase|Single hybrid motif GO:0003824|GO:0006814|GO:0008948 G3DSA:2.40.50.100|G3DSA:3.20.20.70|PF00364|PF00682|PF02436|PS00188|PTHR18866|PTHR18866:SF109|SSF51230|SSF51569|SSF89000|TIGR01108 MEALZ_RS02670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 PF07642|SSF56935 MEALZ_RS02675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 MEALZ_RS02680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011251|IPR016215 Luciferase-like domain|Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497|GO:0016705|GO:0055114 G3DSA:3.20.20.30|PF00296|PIRSF000337|PTHR30011|PTHR30011:SF18|SSF51679 MEALZ_RS02685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR007038|IPR012910 Hydrogenase/Urease accessory protein HupE/UreJ protein|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF04955|PF07715|PTHR32552|PTHR32552:SF36|SSF56935 MEALZ_RS02690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000534|IPR000706|IPR012280|IPR016040|IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site|N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|PS01224|PTHR32338|PTHR32338:SF8|SM00859|SSF51735|SSF55347|TIGR01850 MEALZ_RS02695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000361|IPR016092|IPR017870|IPR023063 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion protein ErpA|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|MF_01380|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049 MEALZ_RS02700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 G3DSA:3.30.420.40|MF_01270|PF03702|PTHR30605|PTHR30605:SF0|SSF53067 MEALZ_RS02705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007340|IPR011055|IPR016047 Duplicated hybrid motif|Opacity-associated protein A|Peptidase M23 G3DSA:2.70.70.10|PF01551|PF04225|PTHR21666|PTHR21666:SF221|SSF51261 MEALZ_RS02710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024088|IPR024108 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type|Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02007|PF00579|PF01479|PR01040|PS00178|PTHR11766|PTHR11766:SF1|SM00363|SSF52374|SSF55174|TIGR00234 MEALZ_RS02745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR23077|PTHR23077:SF55|SM00382|SSF52540 MEALZ_RS02755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|SM00382|SSF52540 MEALZ_RS02760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001453|IPR008135 Competence-induced protein CinA|MoaB/Mog domain G3DSA:3.40.980.10|PF00994|PIRSF006728|PTHR13939|PTHR13939:SF0|SM00852|SSF53218|TIGR00177 MEALZ_RS02765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 PF03547|PTHR36838 MEALZ_RS02770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001754|IPR011060|IPR013785|IPR014732|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0044205 G3DSA:3.20.20.70|MF_01200_B|PF00215|PS00156|PTHR32119|PTHR32119:SF2|SM00934|SSF51366|TIGR01740 MEALZ_RS02775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13386|PTHR42208|PTHR42208:SF1 MEALZ_RS02780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SSF46689|SSF52540 MEALZ_RS02785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF13672|PTHR13832|PTHR13832:SF226|SM00331|SM00332|SSF81606 MEALZ_RS02790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004569|IPR013785 Aldolase-type TIM barrel|Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0003824|GO:0005737|GO:0008615|GO:0033856 G3DSA:3.20.20.70|MF_00279|PF03740|PTHR30456|PTHR30456:SF0|SSF63892|TIGR00559 MEALZ_RS02795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|PTHR33991|SSF50249|SSF57863|TIGR00613 MEALZ_RS02800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|PR00326|PTHR11649|PTHR11649:SF3|SSF52540|SSF54814|TIGR00231|TIGR00436 MEALZ_RS02805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|PTHR11207|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 MEALZ_RS02810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032314 Protein of unknown function DUF4845 PF16137 MEALZ_RS02815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000223|IPR015927|IPR019533|IPR019756|IPR019757|IPR019758|IPR019759|IPR028360 Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Peptidase S26|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site|Peptidase S26A, signal peptidase I, serine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PF10502|PR00727|PS00501|PS00760|PS00761|PTHR12383|PTHR12383:SF27|SSF51306|TIGR02227 MEALZ_RS02820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR009022|IPR013842|IPR027417|IPR031157 Elongation factor 4|Elongation factor G, III-V domain|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFTu/EF1A, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF175|SM00838|SSF52540|SSF54980|TIGR00231|TIGR01393 MEALZ_RS02825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF98|SM00228|SSF50156|SSF50494|TIGR02037 MEALZ_RS02830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005588|IPR033434|IPR033436 MucB/RseB|MucB/RseB, C-terminal|MucB/RseB, N-terminal G3DSA:2.50.20.10|PF03888|PF17188|PIRSF005427|PTHR38782|PTHR38782:SF1 MEALZ_RS02835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 PF03872|SSF89069 MEALZ_RS02840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000838|IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284|IPR014286 RNA polymerase sigma factor 70, ECF, conserved site|RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 RpoE type|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PS01063|PTHR30173|SSF88659|SSF88946|TIGR02937|TIGR02939 MEALZ_RS02845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PF02910|PIRSF000171|PR00368|PTHR11632|PTHR11632:SF27|SSF46977|SSF51905|SSF56425|TIGR00551 MEALZ_RS02865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023824 Conserved hypothetical protein CHP04073, exosortase-affiliated TIGR04073 MEALZ_RS02870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|SSF103088 MEALZ_RS02875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002524|IPR027469 Cation efflux protein|Cation efflux protein transmembrane domain GO:0006812|GO:0008324|GO:0016021|GO:0055085 G3DSA:1.20.1510.10|PF01545|PTHR11562|PTHR11562:SF40|SSF161111|TIGR01297 MEALZ_RS02880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF180|SSF51905|SSF54373 MEALZ_RS02885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 SSF56925 MEALZ_RS02890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR002410|IPR005944|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Peptidase S33|Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508|GO:0008233 G3DSA:3.40.50.1820|PF00561|PIRSF006431|PR00793|PTHR10992|PTHR10992:SF860|SSF53474|TIGR01249 MEALZ_RS02895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003382|IPR004507 Flavin prenyltransferase UbiX/Pad1|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|MF_01984|PF02441|PTHR30108|PTHR30108:SF2|SSF52507|TIGR00421 MEALZ_RS02900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS02905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000385|IPR006638|IPR007197|IPR011843|IPR013785|IPR017200|IPR023885 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Coenzyme PQQ biosynthesis protein E, bacteria|Coenzyme PQQ synthesis protein E|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Radical SAM GO:0003824|GO:0018189|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00660|PF04055|PF13186|PF13353|PIRSF037420|PS01305|PTHR11228|PTHR11228:SF32|SM00729|SSF102114|TIGR02109|TIGR04085 MEALZ_RS02910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008792|IPR022479 Coenzyme PQQ synthesis D|Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 PF05402|TIGR03859 MEALZ_RS02915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR35400|PTHR35400:SF1|SSF52980 MEALZ_RS02920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004305|IPR011845|IPR016084 Coenzyme PQQ biosynthesis protein C|Haem oxygenase-like, multi-helical|Thiaminase-2/PQQC GO:0018189|GO:0055114 G3DSA:1.20.910.10|MF_00654|PF03070|PTHR40279|PTHR40279:SF2|SSF48613|TIGR02111 MEALZ_RS02925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279|IPR011842 Coenzyme PQQ biosynthesis protein B|Metallo-beta-lactamase GO:0006810|GO:0018189 G3DSA:3.60.15.10|MF_00653|PF12706|SSF56281|TIGR02108 MEALZ_RS02935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011577|IPR016174 Cytochrome b561, bacterial/Ni-hydrogenase|Di-haem cytochrome, transmembrane GO:0009055|GO:0016020|GO:0016021|GO:0022904 PF01292|PTHR30529|PTHR30529:SF3|SSF81342 MEALZ_RS02940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001295|IPR005719|IPR005720|IPR012135|IPR013785 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, class 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006222|GO:0016020|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00225|PF01180|PIRSF000164|PS00911|PS00912|PTHR11938|SSF51395|TIGR01036 MEALZ_RS02945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000620 EamA domain GO:0016020|GO:0016021 PF00892|SSF103481 MEALZ_RS02955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR004589|IPR011545|IPR012337|IPR014001|IPR014016|IPR027417|IPR027785 DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Ribonuclease H-like domain|UvrD-like Helicase, ATP-binding domain|UvrD-like helicase C-terminal domain GO:0003676|GO:0005524|GO:0006310|GO:0008026 G3DSA:3.30.420.10|G3DSA:3.40.50.300|PF00270|PF00271|PF00580|PF13538|PTHR13710|PTHR13710:SF81|SM00487|SM00490|SSF52540|SSF53098|TIGR00614 MEALZ_RS02970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 MEALZ_RS02975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PTHR19211|PTHR19211:SF38|SM00382|SSF52540 MEALZ_RS02985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR006379|IPR006380|IPR012821|IPR012822|IPR023214|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Sucrose phosphate synthase, sucrose phosphatase-like domain|Sucrose-phosphatase, N-terminal|Sucrose-phosphate synthase, glycosyltransferase domain G3DSA:3.40.50.1000|G3DSA:3.40.50.2000|G3DSA:3.90.1070.10|PF00534|PF05116|PF13439|PTHR12526|PTHR12526:SF386|SSF53756|SSF56784|TIGR01484|TIGR02471|TIGR02472 MEALZ_RS02990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006379|IPR006380|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|Sucrose-phosphatase, N-terminal G3DSA:3.40.50.1000|G3DSA:3.90.1070.10|PF05116|SSF56784|TIGR01484 MEALZ_RS02995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011611|IPR029056 Carbohydrate kinase PfkB|Ribokinase-like G3DSA:3.40.1190.20|PF00294|PTHR10584|PTHR10584:SF188|SSF53613 MEALZ_RS03000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR013780|IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PTHR10357|PTHR10357:SF122|SM00642|SSF51011|SSF51445 MEALZ_RS03005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|SM00382|SSF52540 MEALZ_RS03010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005226 UPF0014 family PF03649|PTHR30028|PTHR30028:SF0|TIGR00245 MEALZ_RS03015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019231 Protein of unknown function DUF2170 PF09938 MEALZ_RS03020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007157 PspA/IM30 PF04012|PTHR31088|PTHR31088:SF0 MEALZ_RS03025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003148|IPR013099|IPR016040 NAD(P)-binding domain|Potassium channel domain|Regulator of K+ conductance, N-terminal GO:0006813 G3DSA:1.10.287.70|G3DSA:3.40.50.720|PF02254|PF07885|SSF51735|SSF81324 MEALZ_RS03030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019621 Protein of unknown function DUF2491 PF10679 MEALZ_RS03035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007140 Protein of unknown function DUF350 PF03994|PTHR40043|PTHR40043:SF1 MEALZ_RS03040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009576 Biofilm formation YgiB PF06693 MEALZ_RS03045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005494|IPR016185 Glutathionylspermidine synthase, pre-ATP-grasp-like domain|Pre-ATP-grasp domain PF03738|PTHR30094|PTHR30094:SF5|SSF52440|SSF56059 MEALZ_RS03050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007710|IPR019884 Nucleoside 2-deoxyribosyltransferase|YtoQ family protein GO:0009159|GO:0050144|GO:0070694 G3DSA:3.40.50.1810|PF11071|TIGR03646 MEALZ_RS03055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014949 Protein of unknown function DUF1820 PF08850 MEALZ_RS03060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007481 Stringent starvation protein B G3DSA:2.30.30.220|PF04386|PIRSF005276|PTHR37486|PTHR37486:SF1|SSF101738 MEALZ_RS03065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004045|IPR004046|IPR010987|IPR012336 Glutathione S-transferase, C-terminal|Glutathione S-transferase, C-terminal-like|Glutathione S-transferase, N-terminal|Thioredoxin-like fold GO:0005515 G3DSA:1.20.1050.10|G3DSA:3.40.30.10|PF00043|PF13417|PTHR11260|PTHR11260:SF44|SSF47616|SSF52833 MEALZ_RS03070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002326|IPR009056 Cytochrome c-like domain|Cytochrome c1 GO:0009055|GO:0020037 G3DSA:1.10.760.10|G3DSA:1.20.5.100|PF02167|PTHR10266|PTHR10266:SF3|SSF46626 MEALZ_RS03075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005798|IPR016174|IPR027387|IPR030689 Cytochrome b|Cytochrome b/b6, C-terminal|Cytochrome b/b6-like domain|Di-haem cytochrome, transmembrane GO:0006122|GO:0008121|GO:0009055|GO:0016020|GO:0016491|GO:0022904|GO:0045275 G3DSA:1.20.810.10|PF00032|PF00033|PIRSF038885|PTHR19271|PTHR19271:SF9|SSF81342|SSF81648 MEALZ_RS03080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005805|IPR006317|IPR014349|IPR017941|IPR019470 Rieske [2Fe-2S] iron-sulphur domain|Rieske iron-sulphur protein|Rieske iron-sulphur protein, C-terminal|Ubiquinol-cytochrome c reductase, iron-sulphur subunit|Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0016020|GO:0016491|GO:0016679|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PF10399|PR00162|PTHR10134|PTHR10134:SF8|SSF50022|TIGR01416 MEALZ_RS03085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PTHR11751|PTHR11751:SF347|SSF53383|TIGR01141 MEALZ_RS03090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|PTHR21256|SSF53720|TIGR00069 MEALZ_RS03095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001348|IPR013820|IPR018198|IPR024893 ATP phosphoribosyltransferase HisG|ATP phosphoribosyltransferase HisG, short form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site GO:0000105|GO:0003879|GO:0005737 G3DSA:3.40.190.10|MF_01018|PF01634|PS01316|PTHR21403|PTHR21403:SF3|SSF53850|TIGR00070 MEALZ_RS03100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|PTHR21090|SSF55205|TIGR01072 MEALZ_RS03105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF13466|SSF52091 MEALZ_RS03110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003399|IPR030970 Mce/MlaD|Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PF02470|PTHR33371|TIGR04430 MEALZ_RS03115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF4|TIGR00056 MEALZ_RS03120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF368|SM00382|SSF52540 MEALZ_RS03125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004481|IPR004837 Sodium/calcium exchanger membrane region|Sodium/potassium/calcium exchanger GO:0016021|GO:0055085 PF01699|PTHR10846|TIGR00367 MEALZ_RS03130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR001347|IPR004800 CBS domain|Phosphosugar isomerase, KdsD/KpsF-type|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.10.580.10|G3DSA:3.40.50.10490|PF00571|PF01380|PIRSF004692|PTHR38418|PTHR38418:SF1|SM00116|SSF53697|TIGR00393 MEALZ_RS03135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006549|IPR010023|IPR023214 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase|HAD-like domain|HAD-superfamily hydrolase,subfamily IIIA GO:0019143 G3DSA:3.40.50.1000|PF08282|PIRSF006118|PTHR21485|SSF56784|TIGR01662|TIGR01670 MEALZ_RS03140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010664|IPR026265 Lipopolysaccharide assembly, LptC-related|Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 PF06835|PTHR37481|PTHR37481:SF1|TIGR04409 MEALZ_RS03145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005653|IPR014340 Lipopolysaccharide export system protein LptA|Organic solvent tolerance-like, N-terminal GO:0001530|GO:0015920|GO:0042597 G3DSA:2.60.450.10|MF_01914|PF03968|PTHR36504|TIGR03002 MEALZ_RS03150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR030921|IPR032823 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|LPS export ABC transporter, ATP-binding protein LptB|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0043190|GO:0055085 G3DSA:3.40.50.300|PF00005|PF12399|PS00211|PTHR24220|PTHR24220:SF497|SM00382|SSF52540|TIGR04406 MEALZ_RS03155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000394|IPR007046|IPR007634 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|PTHR32248|PTHR32248:SF4|TIGR02395 MEALZ_RS03160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|PTHR33231|SSF69754|TIGR00741 MEALZ_RS03165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|PTHR30448|PTHR30448:SF0|SSF52540 MEALZ_RS03170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR019707 Winged helix-turn-helix DNA-binding domain|Winged helix-turn-helix domain (DUF2582) G3DSA:1.10.10.10|PF10771|SSF46785 MEALZ_RS03175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 G3DSA:3.30.1070.10|MF_00262|PF03776|PTHR33404|SSF55229|TIGR01215 MEALZ_RS03180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002586|IPR010223|IPR025501|IPR027417 ATP binding protein MinD|ATP binding protein MinD, bacterial-type|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0000918|GO:0016887 G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF1|SSF52540|TIGR01968 MEALZ_RS03185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005526|IPR007874|IPR013033|IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC|Septum formation inhibitor MinC, C-terminal|Septum formation inhibitor MinC, N-terminal GO:0000902|GO:0000917|GO:0051302|GO:0051726 G3DSA:2.160.20.70|MF_00267|PF03775|PF05209|PTHR34108|PTHR34108:SF1|SSF63848|TIGR01222 MEALZ_RS03190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384|PTHR11101|PTHR11101:SF51 MEALZ_RS03195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002817|IPR025747 Phosphomethylpyrimidine synthase|ThiC-associated domain GO:0009228|GO:0051536 MF_00089|PF01964|PF13667|PTHR30557|PTHR30557:SF1|TIGR00190 MEALZ_RS03200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 MEALZ_RS03205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008863 Toxic anion resistance PF05816|PIRSF026508|PTHR38432|PTHR38432:SF1 MEALZ_RS03210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein PF10112 MEALZ_RS03215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS03220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SM00327|SSF53300 MEALZ_RS03230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003775|IPR024046 Flagellar assembly factor FliW|Flagellar assembly factor FliW domain GO:0044780 G3DSA:2.30.290.10|MF_01185|PF02623|PTHR39190|SSF141457 MEALZ_RS03235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003190|IPR009010 Aspartate decarboxylase|Aspartate decarboxylase-like domain GO:0004068|GO:0006523 G3DSA:2.40.40.20|MF_00446|PD009294|PF02261|PIRSF006246|PTHR21012|PTHR21012:SF0|SSF50692|TIGR00223 MEALZ_RS03240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003721|IPR004821|IPR014729 Cytidyltransferase-like domain|Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004592|GO:0009058|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|PTHR21299|PTHR21299:SF1|SSF52374|TIGR00018|TIGR00125 MEALZ_RS03245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|PTHR20881|PTHR20881:SF3|SSF51621|TIGR00222 MEALZ_RS03250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|PS00794|PTHR20941|PTHR20941:SF10|SSF55083|TIGR01498 MEALZ_RS03255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002646|IPR010206|IPR025866|IPR032828 Poly A polymerase, head domain|Poly(A) polymerase I|Polymerase A arginine-rich C-terminal domain|tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain GO:0003723|GO:0004652|GO:0006378|GO:0006396|GO:0016779 G3DSA:1.10.3090.10|G3DSA:3.30.460.10|MF_00957|PF01743|PF12626|PF12627|PTHR13734|PTHR13734:SF47|SSF81301|SSF81891|TIGR01942 MEALZ_RS03265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010432 RDD PF06271|PTHR36115|PTHR36115:SF2 MEALZ_RS03270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005495|IPR030923 LPS export ABC transporter permease LptG|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|PTHR33529:SF1|TIGR04408 MEALZ_RS03275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005495|IPR030922 LPS export ABC transporter permease LptF|Permease LptG/LptF-related GO:0016021|GO:0043190|GO:0055085 PF03739|PTHR33529|PTHR33529:SF2|TIGR04407 MEALZ_RS03280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|PTHR11963|PTHR11963:SF13|SSF52949|SSF53187 MEALZ_RS03285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 G3DSA:3.40.50.10110|PF04364|PTHR38767|SSF102400 MEALZ_RS03290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|PTHR11946|PTHR11946:SF5|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 MEALZ_RS03295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR007831|IPR013374|IPR027417 ATPase, type IV, pilus assembly, PilB|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810|GO:0008565|GO:0009297 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF1|SSF160246|SSF52540|TIGR02538 MEALZ_RS03300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001992|IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain|Type II secretion system conserved site GO:0009306|GO:0016020 PF00482|PR00812|PS00874|PTHR30012|PTHR30012:SF0 MEALZ_RS03305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000045|IPR010627|IPR014032 Peptidase A24A, N-terminal|Peptidase A24A, prepilin type IV, bacterial|Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478|PF06750|PR00864|PTHR30487|PTHR30487:SF0 MEALZ_RS03310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001977|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004140|GO:0005524|GO:0015937 G3DSA:3.40.50.300|MF_00376|PF01121|PTHR10695|SSF52540|TIGR00152 MEALZ_RS03315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009777|IPR027462 Cell division protein ZapD|Z ring-associated protein D, C-terminal domain G3DSA:1.10.3900.10|G3DSA:2.60.440.10|MF_01092|PF07072|PTHR39455|PTHR39455:SF1|SSF160950 MEALZ_RS03320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005584|IPR013088 DNA gyrase inhibitor YacG|Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 G3DSA:3.30.50.10|MF_00649|PF03884|PTHR36150|PTHR36150:SF1|SSF57716 MEALZ_RS03330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013126|IPR018181|IPR029047 Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, peptide-binding domain G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF00012|PR00301|PS00297|PS00329|PTHR19375|PTHR19375:SF173|SSF100920|SSF53067 MEALZ_RS03335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000740|IPR009012 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|PF01025|SSF51064 MEALZ_RS03340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PR00625|SM00271|SSF46565 MEALZ_RS03345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS03350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain PF01610|PF13542|PTHR33498|PTHR33498:SF1 MEALZ_RS03355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 MEALZ_RS03360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002931|IPR013589 Bacterial transglutaminase-like, N-terminal|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PTHR33490|PTHR33490:SF6|SM00460|SSF54001 MEALZ_RS03365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007296|IPR025841 Circularly permuted ATP-grasp type 2|Domain of unknown function DUF403 PF04168|PF14403|PTHR34595|PTHR34595:SF1|SSF56059 MEALZ_RS03370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002931|IPR013589|IPR018667 Bacterial transglutaminase-like, N-terminal|Domain of unknown function DUF2126|Transglutaminase-like G3DSA:3.90.260.10|PF01841|PF08379|PF09899|PTHR33490|PTHR33490:SF1|SM00460|SSF54001 MEALZ_RS03375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS03380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018741 Protein of unknown function DUF2288 PF10052 MEALZ_RS03390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|SSF103473 MEALZ_RS03400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008734|IPR008928|IPR011613|IPR012341 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family|Phosphorylase kinase alpha/beta subunit|Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824|GO:0005516|GO:0005977 G3DSA:1.50.10.10|PF00723|PTHR10749|PTHR10749:SF7|SSF48208 MEALZ_RS03405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 G3DSA:3.40.367.20|PF02685|PTHR30514|PTHR30514:SF0|SSF53067|TIGR00749 MEALZ_RS03410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032033 Cytochrome P460 PF16694 MEALZ_RS03415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019657 Late competence development protein ComFB PF10719 MEALZ_RS03425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 MEALZ_RS03430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|PTHR30075|SSF55681|TIGR00388 MEALZ_RS03435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008909|IPR009080|IPR015944 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|DALR anticodon binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004812|GO:0004814|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006420|GO:0006426 G3DSA:1.10.730.10|MF_00255|PF02092|PF05746|PR01045|PTHR30075|SSF109604|TIGR00211 MEALZ_RS03440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|SM00563|SSF69593 MEALZ_RS03450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|PTHR23088|PTHR23088:SF29|SSF56317|TIGR00546 MEALZ_RS03455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS03460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS03465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001807|IPR014743 Chloride channel, core|Chloride channel, voltage gated GO:0005216|GO:0005247|GO:0006821|GO:0016020|GO:0055085 G3DSA:1.10.3080.10|PF00654|PR00762|PTHR11689|PTHR11689:SF14|SSF81340 MEALZ_RS03480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002085|IPR011032|IPR013149|IPR016040 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|GroES-like|NAD(P)-binding domain GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PTHR11695|PTHR11695:SF38|SSF50129|SSF51735 MEALZ_RS03485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PTHR12589|PTHR12589:SF5|SSF55620 MEALZ_RS03490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013217|IPR029063 Methyltransferase type 12|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF08242|SSF53335 MEALZ_RS03495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|SSF52980 MEALZ_RS03500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000330|IPR001650|IPR007527|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain|Zinc finger, SWIM-type GO:0005524|GO:0008270 G3DSA:3.40.50.300|PF00176|PF00271|PF04434|PTHR10799|SM00487|SM00490|SSF52540 MEALZ_RS03505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS03510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279|IPR011108|IPR022712 Beta-Casp domain|Metallo-beta-lactamase|Zn-dependent metallo-hydrolase, RNA specificity domain G3DSA:3.60.15.10|PF00753|PF07521|PF10996|PTHR11203|PTHR11203:SF11|SM00849|SM01027|SSF56281 MEALZ_RS03515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012547|IPR018631|IPR027417 AAA-ATPase-like domain|P-loop containing nucleoside triphosphate hydrolase|PD-(D/E)XK nuclease superfamily 9 G3DSA:3.40.50.300|PF08011|PF09820|PTHR34825|PTHR34825:SF1|SSF52540 MEALZ_RS03520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012547|IPR018631|IPR027417 AAA-ATPase-like domain|P-loop containing nucleoside triphosphate hydrolase|PD-(D/E)XK nuclease superfamily 9 G3DSA:3.40.50.300|PF08011|PF09820|PTHR34825|PTHR34825:SF1|SSF52540 MEALZ_RS03530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003869|IPR016040|IPR020025 NAD(P)-binding domain|Polysaccharide biosynthesis protein, CapD-like domain|UDP-N-acetylglucosamine 4,6-dehydratase (inverting) G3DSA:3.40.50.720|PF02719|PTHR10366|PTHR10366:SF360|SSF51735|TIGR03589 MEALZ_RS03535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000653|IPR015421|IPR015422|IPR015424|IPR020026 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF3|SSF53383|TIGR03588 MEALZ_RS03540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003329|IPR020039|IPR029044 Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases|Pseudaminic acid cytidylyltransferase G3DSA:3.90.550.10|PF02348|PTHR21485|SSF53448|TIGR03584 MEALZ_RS03545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase G3DSA:3.40.50.2000|SSF53756|TIGR03590 MEALZ_RS03550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004821|IPR006409|IPR014729 Cytidyltransferase-like domain|Glycerol-3-phosphate cytidylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0005737|GO:0009058|GO:0019350|GO:0046872|GO:0047348 G3DSA:3.40.50.620|PF01467|PTHR10739|SSF52374|TIGR00125|TIGR01518 MEALZ_RS03555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 MEALZ_RS03565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 MEALZ_RS03575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF16|SSF53383 MEALZ_RS03580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011004 Trimeric LpxA-like G3DSA:2.160.10.10|PTHR23416|SSF51161 MEALZ_RS03590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|PTHR12725|PTHR12725:SF69|SSF56784 MEALZ_RS03595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003806|IPR013816|IPR016185 ATP-grasp fold, DUF201-type|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain GO:0005524|GO:0046872 G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF02655|SSF56059 MEALZ_RS03600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007074|IPR016040 LicD family|NAD(P)-binding domain G3DSA:3.40.50.720|PF04991|PTHR13627 MEALZ_RS03605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006190|IPR013132|IPR013785|IPR013974|IPR020030 Aldolase-type TIM barrel|Antifreeze-like/N-acetylneuraminic acid synthase C-terminal|N-acetylneuraminic acid synthase, N-terminal|Pseudaminic acid biosynthesis, PseI|SAF domain GO:0003824|GO:0016051 G3DSA:3.20.20.70|G3DSA:3.90.1210.10|PF03102|PF08666|PTHR23416|PTHR23416:SF62|SM00858|SSF51269|SSF51569|TIGR03586 MEALZ_RS03610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 MEALZ_RS03615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005186 FlaG protein G3DSA:3.30.160.170|PF03646|PTHR37166|PTHR37166:SF1|SSF160214 MEALZ_RS03620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003481|IPR010809|IPR010810 Flagellar hook-associated 2, C-terminal|Flagellar hook-associated protein 2, N-terminal|Flagellin hook, IN motif GO:0006928|GO:0007155|GO:0009288|GO:0009424|GO:0044781 PF02465|PF07195|PF07196|PTHR30288|PTHR30288:SF0 MEALZ_RS03625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003713 Flagellar protein FliS GO:0044780 G3DSA:1.20.120.340|PF02561|PIRSF039090|PTHR34773|SSF101116|TIGR00208 MEALZ_RS03630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008622 Flagellar protein FliT PF05400|SSF140560 MEALZ_RS03635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002826|IPR011990 6-hydroxymethylpterin diphosphokinase MptE-like|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.90.1480.10|PF01973|PTHR41786|PTHR41786:SF1|SSF48452 MEALZ_RS03640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001029|IPR001492 Flagellin|Flagellin, D0/D1 domain GO:0005198|GO:0009420|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PR00207|PTHR30244|PTHR30244:SF1|SSF64518 MEALZ_RS03645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578|PTHR38034 MEALZ_RS03650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|PTHR11564|PTHR11564:SF7|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 MEALZ_RS03655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000307|IPR020592|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain|Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|PS00732|PTHR12919|SSF54565|TIGR00002 MEALZ_RS03660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002676|IPR009000|IPR011033|IPR011961|IPR027275 16S rRNA processing protein RimM|PRC-barrel domain|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|PF05239|PTHR33692|SSF50346|SSF50447|TIGR02273 MEALZ_RS03665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002649|IPR016009|IPR023148|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, C-terminal|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PIRSF000386|PTHR32125|PTHR32125:SF1|SSF75217|TIGR00088 MEALZ_RS03670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|PTHR15680|SSF50104|TIGR01024 MEALZ_RS03675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001497|IPR011991|IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|PF01035|PS00374|PTHR10815|PTHR10815:SF5|SSF46767|TIGR00589 MEALZ_RS03680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR004107|IPR010998|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, Lambda-type, N-terminal|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01807|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF5|SSF47823|SSF56349|TIGR02225 MEALZ_RS03685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR010137|IPR011004|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|PF00132|PF13720|PIRSF000456|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 MEALZ_RS03690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021268 Protein of unknown function DUF2845 PF11006 MEALZ_RS03695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PF13247|PS00198|PTHR11938|PTHR11938:SF88|SSF54862 MEALZ_RS03700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001203|IPR013983|IPR013985 Aldehyde ferredoxin oxidoreductase, C-terminal|Aldehyde ferredoxin oxidoreductase, N-terminal|Aldehyde ferredoxin oxidoreductase, domain 3 GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 G3DSA:1.10.599.10|G3DSA:3.60.9.10|PF01314|PF02730|PTHR30038|PTHR30038:SF0|SM00790|SSF48310|SSF56228 MEALZ_RS03705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF180|SSF51905 MEALZ_RS03710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013698|IPR023753 FAD/NAD(P)-binding domain|Squalene epoxidase GO:0004506|GO:0016021|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|PF08491|PR00420|PTHR10835|PTHR10835:SF0|SSF51905 MEALZ_RS03715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002365|IPR008930|IPR018333|IPR032696|IPR032697 Squalene cyclase|Squalene cyclase, C-terminal|Squalene cyclase, N-terminal|Terpene synthase, conserved site|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0016866 G3DSA:1.50.10.20|PF13243|PF13249|PS01074|PTHR11764|PTHR11764:SF20|SSF48239|TIGR01787 MEALZ_RS03720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032710 NTF2-like domain SSF54427 MEALZ_RS03725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001128|IPR002403 Cytochrome P450|Cytochrome P450, E-class, group IV GO:0004497|GO:0005506|GO:0016705|GO:0020037|GO:0055114 G3DSA:1.10.630.10|G3DSA:3.30.70.20|PF00067|PF13370|PR00385|PR00465|PTHR24286|PTHR24286:SF24|SSF48264|SSF54862 MEALZ_RS03730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003462|IPR016040|IPR023401 NAD(P)-binding domain|Ornithine cyclodeaminase, N-terminal|Ornithine cyclodeaminase/mu-crystallin G3DSA:3.30.1780.10|G3DSA:3.40.50.720|PF02423|PIRSF001439|PTHR13812|PTHR13812:SF19|SSF51735 MEALZ_RS03735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285 MEALZ_RS03745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PTHR24322|PTHR24322:SF631|SSF51735 MEALZ_RS03750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003710|IPR008927|IPR013328|IPR013332|IPR013752|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Ketopantoate reductase ApbA/PanE|Ketopantoate reductase, C-terminal domain|Ketopantoate reductase, N-terminal domain|NAD(P)-binding domain GO:0005737|GO:0008677|GO:0015940|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF02558|PF08546|PTHR21708|SSF48179|SSF51735|TIGR00745 MEALZ_RS03755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013317|IPR017788|IPR027417 Chromosomal replication initiator protein DnaA|DnaA regulatory inactivator Hda|P-loop containing nucleoside triphosphate hydrolase GO:0032297 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|PTHR30050|PTHR30050:SF5|SSF52540|TIGR03420 MEALZ_RS03760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018643 Protein of unknown function DUF2069, membrane PF09842 MEALZ_RS03765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006659|IPR006660|IPR012336 Arsenate reductase|Arsenate reductase-like|Thioredoxin-like fold GO:0008794|GO:0055114 G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF4|SSF52833|TIGR00014 MEALZ_RS03770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000537|IPR006370|IPR030470|IPR031103 4-hydroxybenzoate octaprenyltransferase|4-hydroxybenzoate polyprenyltransferase|UbiA prenyltransferase conserved site|UbiA prenyltransferase family GO:0004659|GO:0006744|GO:0016021 MF_01635|PF01040|PS00943|PTHR11048|TIGR01474 MEALZ_RS03775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003848|IPR014729 Domain of unknown function DUF218|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|PF02698|PTHR30336|PTHR30336:SF1 MEALZ_RS03815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003798 DNA recombination RmuC G3DSA:1.20.120.20|PF02646|PTHR30563|SSF58113 MEALZ_RS03825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30329|PTHR30329:SF5|SSF103088 MEALZ_RS03830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR028943 EH signature domain PF15611 MEALZ_RS03835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000330|IPR001650|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain GO:0005524 G3DSA:3.40.50.300|PF00176|PF00271|PTHR10799|PTHR10799:SF624|SM00487|SM00490|SSF52540 MEALZ_RS03845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR12905|SSF56300 MEALZ_RS03850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012893|IPR012894|IPR017508 HipA, N-terminal subdomain 1|HipA, N-terminal subdomain 2|HipA-like, C-terminal PF07804|PF07805|PF13657|PTHR37419|PTHR37419:SF2 MEALZ_RS03855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13560|PTHR10245|PTHR10245:SF24|SM00530|SSF47413 MEALZ_RS03860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 MEALZ_RS03865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 MEALZ_RS03870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 MEALZ_RS03890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR003018|IPR006675|IPR013976|IPR029016|IPR029787 GAF domain|GAF domain-like|GGDEF domain|HDIG domain|Metal-dependent hydrolase HDOD|Nucleotide cyclase GO:0005515 G3DSA:1.10.3150.10|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00990|PF01590|PF08668|PTHR33525|PTHR33525:SF3|SM00065|SM00267|SSF109604|SSF55073|SSF55781|TIGR00254|TIGR00277 MEALZ_RS03895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008901 Ceramidase GO:0006672|GO:0016021|GO:0016811 PF05875|PTHR34368|PTHR34368:SF1 MEALZ_RS03900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011757|IPR023346|IPR031304 Lysozyme-like domain|Lytic transglycosylase MltB|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|PTHR30163|PTHR30163:SF0|SSF53955|TIGR02282 MEALZ_RS03905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022529|IPR029058 Alpha/Beta hydrolase fold|Protein of unknown function DUF3530 G3DSA:3.40.50.1820|PF12048|SSF53474 MEALZ_RS03920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10681|PTHR10681:SF68|SSF52833 MEALZ_RS03925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025362 Domain of unknown function DUF4266 PF14086 MEALZ_RS03930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021953 Protein of unknown function DUF3570 PF12094 MEALZ_RS03935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF2|SSF143631 MEALZ_RS03945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001638|IPR008258|IPR023346|IPR023703 Lysozyme-like domain|Membrane-bound lytic murein transglycosylase F|Solute-binding protein family 3/N-terminal domain of MltF|Transglycosylase SLT domain 1 GO:0016837 G3DSA:1.10.530.10|G3DSA:3.40.190.10|MF_02016|PF00497|PF01464|PTHR21666|PTHR21666:SF215|SM00062|SSF53850|SSF53955 MEALZ_RS03950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007452 Translocation and assembly module TamB PF04357|PTHR36985 MEALZ_RS03955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000184 Bacterial surface antigen (D15) GO:0019867 G3DSA:2.40.160.50|PF01103|PTHR12815|PTHR12815:SF12 MEALZ_RS03965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008256|IPR009003 Peptidase S1, PA clan|Peptidase S1B GO:0006508|GO:0008236 G3DSA:2.40.10.10|PF13365|PR00839|PTHR22939|PTHR22939:SF79|SSF50494 MEALZ_RS03970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF4|SM00833|SSF52540 MEALZ_RS03975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014955 Protein of unknown function DUF1826 PF08856 MEALZ_RS03985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|PTHR21256|SSF141734 MEALZ_RS03990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003495|IPR011629|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF43|SM00833|SSF52540|SSF90002 MEALZ_RS03995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR16950 MEALZ_RS04000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like G3DSA:3.40.50.1010|PF01850|SSF88723 MEALZ_RS04005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PF02604|SSF143120 MEALZ_RS04010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011059|IPR012027|IPR013108|IPR032466 Amidohydrolase 3|Formylmethanofuran dehydrogenase, subunit A|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|PF07969|PIRSF006453|SSF51338|SSF51556|TIGR03121 MEALZ_RS04015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003495|IPR011629|IPR012824|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Cobalamin (vitamin B12) biosynthesis CobW|Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0009236 G3DSA:3.30.1220.10|G3DSA:3.40.50.300|PF02492|PF07683|PTHR13748|PTHR13748:SF10|SM00833|SSF52540|SSF90002 MEALZ_RS04020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003801|IPR022838 GTP cyclohydrolase FolE2|GTP cyclohydrolase FolE2/MptA GO:0003933|GO:0003934|GO:0035998 G3DSA:3.10.270.10|MF_01527_B|PF02649|PTHR36445|PTHR36445:SF1 MEALZ_RS04030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007471|IPR007472|IPR016181|IPR017138|IPR030700 Acyl-CoA N-acyltransferase|Arginine-tRNA-protein transferase|Arginine-tRNA-protein transferase, C-terminal|Arginine-tRNA-protein transferase, N-terminal|Putative arginyl-tRNA--protein transferase, prokaryotic GO:0004057|GO:0016598 MF_00689|PF04376|PF04377|PIRSF037208|PTHR21367|SSF55729 MEALZ_RS04035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004616|IPR016181 Acyl-CoA N-acyltransferase|Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MF_00688|PF03588|PTHR30098|SSF55729|TIGR00667 MEALZ_RS04040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|PTHR22912|PTHR22912:SF48|SSF51905|TIGR01292 MEALZ_RS04045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021342 Protein of unknown function DUF2959 PF11172 MEALZ_RS04050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000795|IPR004161|IPR004548|IPR005225|IPR009000|IPR009022|IPR027417|IPR031157|IPR032090 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Peptide chain release factor 3|Peptide chain release factor 3, C-terminal|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0005737|GO:0006415|GO:0016149 G3DSA:2.40.30.10|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00072|PF00009|PF03144|PF16658|PR00315|PS00301|PTHR23115|PTHR23115:SF69|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR00503 MEALZ_RS04060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003787|IPR017463|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 G3DSA:3.40.1260.10|PF02635|PTHR34874|PTHR34874:SF1|SSF75169|TIGR03012 MEALZ_RS04065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003787|IPR017462|IPR027396 DsrEFH-like|Sulphur relay, DsrE/F-like protein|Sulphur relay, TusC/DsrF G3DSA:3.40.1260.10|PF02635|PTHR38780|PTHR38780:SF1|SSF75169|TIGR03010 MEALZ_RS04070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|PTHR19211|PTHR19211:SF7|SM00382|SSF52540|TIGR03719 MEALZ_RS04075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023393 START-like domain G3DSA:3.30.530.20|SSF55961 MEALZ_RS04080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR011712|IPR032244 Histidine kinase-like ATPase, C-terminal domain|LapD/MoxY, periplasmic domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF02518|PF07730|PF16448|PTHR24421|PTHR24421:SF1|SM00387|SSF55874 MEALZ_RS04085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS04090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001585|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0005975 G3DSA:3.20.20.70|PF00923|PS01054|PTHR10683|PTHR10683:SF15|SSF51569 MEALZ_RS04095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011009|IPR016477 Fructosamine/Ketosamine-3-kinase|Protein kinase-like domain G3DSA:3.90.1200.10|PF03881|PIRSF006221|PTHR12149|PTHR12149:SF8|SSF56112 MEALZ_RS04100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014826|IPR020568 Formaldehyde-activating enzyme|Ribosomal protein S5 domain 2-type fold GO:0016051|GO:0016840 G3DSA:3.30.230.60|PF08714|PTHR35039|PTHR35039:SF1|SSF54211|TIGR03126 MEALZ_RS04115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014016|IPR020683|IPR027417 Ankyrin repeat-containing domain|P-loop containing nucleoside triphosphate hydrolase|UvrD-like Helicase, ATP-binding domain GO:0005524 G3DSA:1.25.40.20|G3DSA:3.40.50.300|PF00580|PTHR21529|PTHR21529:SF4|SSF48403|SSF52540 MEALZ_RS04125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001905|IPR018047|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|PTHR11730|PTHR11730:SF17|SSF111352|TIGR00836 MEALZ_RS04130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|PTHR30115|PTHR30115:SF12|SM00938|SSF54913 MEALZ_RS04135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001905|IPR018047|IPR019879|IPR024041|IPR029020 Ammonium transporter|Ammonium transporter AmtB-like domain|Ammonium transporter, conserved site|Ammonium transporter, marine subtype|Ammonium/urea transporter GO:0008519|GO:0015696|GO:0016020|GO:0072488 G3DSA:1.10.3430.10|PF00909|PS01219|PTHR11730|PTHR11730:SF6|SSF111352|TIGR00836|TIGR03644 MEALZ_RS04140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002187|IPR002332|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein P-II, urydylation site|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PIRSF039144|PR00340|PS00496|PS00638|PTHR30115|PTHR30115:SF12|SM00938|SSF54913 MEALZ_RS04145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001637|IPR004809|IPR008146|IPR008147|IPR014746|IPR027302|IPR027303 Glutamine synthetase class-I, adenylation site|Glutamine synthetase type I|Glutamine synthetase, N-terminal conserved site|Glutamine synthetase, beta-Grasp domain|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0005737|GO:0006542|GO:0006807|GO:0009399 G3DSA:3.10.20.70|G3DSA:3.30.590.10|PF00120|PF03951|PS00180|PS00181|PS00182|PTHR20852|PTHR20852:SF15|SM01230|SSF54368|SSF55931|TIGR00653 MEALZ_RS04150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR003594|IPR003661|IPR004358|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PR00344|PTHR24423|PTHR24423:SF488|SM00387|SM00388|SSF47384|SSF55785|SSF55874 MEALZ_RS04155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR010114|IPR011006|IPR025662|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, nitrogen regulation NR(I)|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0006808|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00688|PTHR32071|PTHR32071:SF15|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR01818 MEALZ_RS04160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005474|IPR005475|IPR009014|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PTHR11624|PTHR11624:SF75|SM00861|SSF52518|SSF52922 MEALZ_RS04165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF28|SSF82693|SSF82714|SSF82866 MEALZ_RS04170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF11|SSF111369|TIGR01730 MEALZ_RS04180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS04185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 MEALZ_RS04200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006694|IPR021327 Fatty acid hydroxylase|Protein of unknown function DUF2934 GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116|PF11154|PTHR11863|PTHR11863:SF2 MEALZ_RS04210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR001792|IPR007024|IPR028081|IPR028082|IPR029787 Acylphosphatase-like domain|BLUF domain|EAL domain|GGDEF domain|Leucine-binding protein domain|Nucleotide cyclase|PAS domain|Periplasmic binding protein-like I GO:0009882|GO:0071949 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00563|PF00990|PF04940|PF13426|PF13458|PTHR33121|PTHR33121:SF13|SM00052|SM00091|SM00267|SM01034|SSF141868|SSF53822|SSF54975|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS04215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002085|IPR011032|IPR013149|IPR013154|IPR014189|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase PIG3 GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PTHR11695|PTHR11695:SF610|SM00829|SSF50129|SSF51735|TIGR02824 MEALZ_RS04220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001307|IPR001763 Rhodanese-like domain|Thiosulphate sulfurtransferase, conserved site GO:0004792 G3DSA:3.40.250.10|PF00581|PS00380|PTHR11364|PTHR11364:SF0|SM00450|SSF52821 MEALZ_RS04225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003010|IPR003694|IPR014729|IPR022310 Carbon-nitrogen hydrolase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PTHR23090|SSF52402|SSF56317|TIGR00552 MEALZ_RS04230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021241 Peptidoglycan-binding protein, CsiV PF10972 MEALZ_RS04235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002792|IPR005839|IPR006463|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe|TRAM domain|tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0003824|GO:0005737|GO:0006400|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01864|PF00919|PF01938|PF04055|PS01278|PTHR11918|PTHR11918:SF43|SM00729|SSF102114|TIGR00089|TIGR01574 MEALZ_RS04240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003714|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PhoH-like protein GO:0005524 G3DSA:3.40.50.300|PF02562|PTHR30473|PTHR30473:SF1|SSF52540 MEALZ_RS04245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002036|IPR020549|IPR023091 Endoribonuclease YbeY|Endoribonuclease YbeY, conserved site|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|MF_00009|PF02130|PS01306|PTHR22881|SSF55486|TIGR00043 MEALZ_RS04250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|PTHR22777|SM00116|SM01091|SSF54631|SSF56176 MEALZ_RS04255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|PTHR23083|SM00028|SSF48452 MEALZ_RS04260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003886|IPR013424 NIDO domain|PEP-CTERM protein-sorting domain GO:0007160 PF06119|PF07589|PTHR13802|PTHR13802:SF46|TIGR02595 MEALZ_RS04265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013321 Arc-type ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10 MEALZ_RS04270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR38813|PTHR38813:SF1|SSF143011 MEALZ_RS04275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018660 C-type lysozyme, inhibitor PF09864|SSF141488 MEALZ_RS04280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005184 Domain of unknown function DUF306, Meta/HslJ PF03724|PTHR35535|PTHR35535:SF2 MEALZ_RS04285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF306|SSF53383 MEALZ_RS04290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|PTHR24029|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 MEALZ_RS04295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002931 Transglutaminase-like G3DSA:3.90.260.10|PF01841|PTHR33490|PTHR33490:SF3|SM00460|SSF54001 MEALZ_RS04300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR000673|IPR000780|IPR001610|IPR001633|IPR013656|IPR022641|IPR022642|IPR029063|IPR029787 Chemotaxis receptor methyltransferase CheR, N-terminal|EAL domain|GGDEF domain|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4|S-adenosyl-L-methionine-dependent methyltransferase|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008757|GO:0008984 G3DSA:1.10.155.10|G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.150|G3DSA:3.40.50.180|PF00563|PF00990|PF01339|PF01739|PF03705|PF08448|PF13426|PR00996|PTHR24422|PTHR24422:SF6|SM00052|SM00086|SM00091|SM00138|SM00267|SSF141868|SSF47757|SSF52738|SSF53335|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS04305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001294|IPR003018|IPR013515|IPR013654|IPR029016 GAF domain|GAF domain-like|PAS domain|PAS fold-2|Phytochrome|Phytochrome, central region GO:0005515|GO:0006355|GO:0009584|GO:0018298 G3DSA:3.30.450.40|PF00360|PF01590|PF08446|PR01033|PTHR24423|PTHR24423:SF414|SM00065|SSF55781|SSF55785 MEALZ_RS04310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016053|IPR016084 Haem oxygenase-like|Haem oxygenase-like, multi-helical GO:0004392|GO:0006788|GO:0055114 G3DSA:1.20.910.10|PF01126|SSF48613 MEALZ_RS04325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002314|IPR002320|IPR004095|IPR004154|IPR012675|IPR012676|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Beta-grasp domain|TGS|TGS-like|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.10.20.30|G3DSA:3.30.54.20|G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF02824|PF03129|PF07973|PR01047|PTHR11451|PTHR11451:SF31|SM00863|SSF52954|SSF55186|SSF55681|SSF81271|TIGR00418 MEALZ_RS04330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|PTHR10938|SSF54364|SSF55200|TIGR00168 MEALZ_RS04335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|PTHR33343|SSF143034|TIGR00001 MEALZ_RS04340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|PTHR10986|PTHR10986:SF12|SSF74731|TIGR01032 MEALZ_RS04345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|PTHR11538|SSF46589|SSF55681|TIGR00468 MEALZ_RS04350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0008033 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.56.20|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|PTHR10947|PTHR10947:SF0|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 MEALZ_RS04355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000119|IPR005684|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 G3DSA:4.10.520.10|MF_00380|PF00216|PR01727|PS00045|PTHR33175|PTHR33175:SF2|SM00411|SSF47729|TIGR00987 MEALZ_RS04360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|PTHR30204|PTHR30204:SF15|SM00422|SSF46955 MEALZ_RS04370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR010518|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Flagellar regulatory FleQ|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PF06490|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF36|SM00382|SSF46689|SSF52540 MEALZ_RS04375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF13188|PR00344|PTHR24423|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874 MEALZ_RS04380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025944|IPR027417|IPR029995 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain|Transcriptional regulatory protein FlbD GO:0000160|GO:0003677|GO:0003700|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00675|PS00688|PTHR32071|PTHR32071:SF21|SM00382|SM00448|SSF46689|SSF52172|SSF52540 MEALZ_RS04385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MF_00724|PF02049|PR01006|PTHR34653|TIGR00205 MEALZ_RS04390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000067|IPR006182|IPR013556 Flagellar M-ring C-terminal|Flagellar M-ring protein FliF|Secretory protein YscJ/FliF GO:0003774|GO:0009431|GO:0071973 PF01514|PF08345|PIRSF004862|PR01009|PTHR30046|PTHR30046:SF0|TIGR00206 MEALZ_RS04395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000090|IPR011002|IPR023087|IPR028263|IPR032779 Flagellar motor switch protein FliG|Flagellar motor switch protein FliG, C-terminal|Flagellar motor switch protein FliG, N-terminal domain|Flagellar motor switch protein FliG, alpha-helical|Flagellar motor switch protein FliG, middle domain GO:0003774|GO:0006935|GO:0009288|GO:0071973 G3DSA:1.10.220.30|PF01706|PF14841|PF14842|PIRSF003161|PR00954|PTHR30534|PTHR30534:SF0|SSF48029|TIGR00207 MEALZ_RS04400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000563|IPR018035 Flagellar assembly protein FliH|Flagellar assembly protein FliH/Type III secretion system HrpE GO:0003774|GO:0009288|GO:0071973 PF02108|PR01003|PTHR34982|PTHR34982:SF1 MEALZ_RS04405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR003593|IPR005714|IPR020003|IPR020005|IPR027417|IPR032463 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPase, type III secretion system, FliI|ATPase, type III secretion system, FliI/YscN|Flagellar export ATPase FliI, clade 1|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257|GO:0044780|GO:0071973 G3DSA:3.40.50.300|PF00006|PS00152|PTHR15184|PTHR15184:SF9|SM00382|SSF52540|TIGR01026|TIGR03496 MEALZ_RS04415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 PF02050|PTHR38786|TIGR02473 MEALZ_RS04430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004147|IPR011009 Protein kinase-like domain|UbiB domain G3DSA:3.90.1200.10|PF03109|PTHR10566|PTHR10566:SF10|SSF56112 MEALZ_RS04435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 MEALZ_RS04440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032808 DoxX family PF07681|PTHR33452|PTHR33452:SF5 MEALZ_RS04445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 G3DSA:3.90.420.10|PF00174|PTHR19372|PTHR19372:SF1|SSF56524 MEALZ_RS04450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032033 Cytochrome P460 PF16694 MEALZ_RS04455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR012312|IPR012827|IPR013655 Haemerythrin, metal-binding domain|Haemerythrin-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772|GO:0046872 G3DSA:1.10.287.130|G3DSA:1.20.120.50|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF01814|PF02518|PF08447|PR00344|PTHR24423|PTHR24423:SF497|SM00086|SM00387|SM00388|SSF47188|SSF47384|SSF55785|SSF55874|TIGR02481 MEALZ_RS04460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006689|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTPase superfamily, ARF/SAR type GO:0005525 G3DSA:3.40.50.300|PF00025|PTHR11711|PTHR11711:SF128|SSF52540 MEALZ_RS04465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF497|SM00387|SM00388|SSF47384|SSF55874 MEALZ_RS04470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR001789|IPR003593|IPR007831|IPR011006|IPR027417 AAA+ ATPase domain|CheY-like superfamily|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Signal transduction response regulator, receiver domain|Type II secretion system protein E GO:0000160|GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF2|SM00382|SM00448|SSF160246|SSF52172|SSF52540 MEALZ_RS04475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008490|IPR025668 Transposase DDE domain|Transposase InsH, N-terminal PF05598|PF13751|PTHR33408|PTHR33408:SF2 MEALZ_RS04480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF515|SM00448|SSF52172 MEALZ_RS04485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR003018|IPR003594|IPR003661|IPR004358|IPR013655|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PF13185|PR00344|PTHR24423|PTHR24423:SF497|SM00065|SM00091|SM00387|SSF47384|SSF55781|SSF55785|SSF55874|TIGR00229 MEALZ_RS04490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF710|SM00267|SSF55073|TIGR00254 MEALZ_RS04495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001980|IPR004821|IPR014729 Coenzyme A biosynthesis protein|Cytidyltransferase-like domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PD016147|PF01467|PR01020|PTHR21342|PTHR21342:SF1|SSF52374|TIGR00125|TIGR01510 MEALZ_RS04500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PS00198|PTHR24960|PTHR24960:SF38|SSF54862 MEALZ_RS04505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970|IPR025288 Cobalamin (vitamin B12)-binding domain|Domain of unknown function DUF4080|Elongator protein 3/MiaB/NifB|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.80.30.20|PF02310|PF04055|PF13311|PTHR11918|PTHR11918:SF64|SM00729|SSF102114|SSF52242 MEALZ_RS04515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003728|IPR028989|IPR028998 Ribosome maturation factor RimP|Ribosome maturation factor RimP, C-terminal|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:2.30.30.180|G3DSA:3.30.300.70|MF_01077|PF02576|PTHR33867|PTHR33867:SF1|SSF74942|SSF75420 MEALZ_RS04520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR010214|IPR010995|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 DNA repair Rad51/transcription factor NusA, alpha-helical|K Homology domain|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination factor NusA, C-terminal duplication|Transcription termination/antitermination protein NusA, bacterial GO:0000166|GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|PF14520|PTHR22648|PTHR22648:SF0|SM00316|SM00322|SSF47794|SSF50249|SSF54814|SSF69705|TIGR01953|TIGR01954 MEALZ_RS04525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000178|IPR005225|IPR006847|IPR009000|IPR009061|IPR013575|IPR023115|IPR027417 Initiation factor 2 associated domain, bacterial|P-loop containing nucleoside triphosphate hydrolase|Putative DNA-binding domain|Small GTP-binding protein domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF08364|PF11987|PS01176|PTHR23115|PTHR23115:SF184|SSF46955|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 MEALZ_RS04530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000238|IPR015946|IPR020053|IPR023799 K homology domain-like, alpha/beta|Ribosome-binding factor A|Ribosome-binding factor A domain|Ribosome-binding factor A, conserved site GO:0006364 G3DSA:3.30.300.20|MF_00003|PD007327|PF02033|PS01319|PTHR33515|SSF89919|TIGR00082 MEALZ_RS04535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002501|IPR014780|IPR015240|IPR015947|IPR020103|IPR032819 PUA-like domain|Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB|tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal|tRNA pseudouridylate synthase B, C-terminal GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 G3DSA:2.30.130.10|MF_01080|PF01509|PF09157|PF16198|PTHR13767|PTHR13767:SF2|SSF55120|SSF88697|TIGR00431 MEALZ_RS04540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|PTHR23321|SM01387|SSF47060|TIGR00952 MEALZ_RS04545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|PTHR11252|PTHR11252:SF0|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 MEALZ_RS04550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008168|IPR009056 Cytochrome c, class IC|Cytochrome c-like domain GO:0005506|GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|PR00605|PTHR34688|PTHR34688:SF2|SSF46626 MEALZ_RS04555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013651|IPR013815|IPR016185|IPR025839 ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 1|Pre-ATP-grasp domain|RimK-like ATPgrasp N-terminal domain GO:0003824|GO:0005524 G3DSA:3.30.1490.20|G3DSA:3.40.50.20|PF08443|PF14401|PTHR11609|PTHR11609:SF4|SSF56059 MEALZ_RS04560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021259 Protein of unknown function DUF2817 G3DSA:3.40.630.10|PF10994|SSF53187 MEALZ_RS04565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR006464|IPR016181|IPR021770 Acyl-CoA N-acyltransferase|GNAT domain|Protein of unknown function DUF3335|Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0008080|GO:0016407 G3DSA:3.40.630.30|PF00583|PF11814|PTHR23091|PTHR23091:SF256|SSF55729|TIGR01575 MEALZ_RS04570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003734 Domain of unknown function DUF155 PF02582|PTHR16255 MEALZ_RS04580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 MEALZ_RS04585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003203|IPR027417 Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0009236|GO:0043752|GO:0051188 G3DSA:3.40.50.300|PF02283|PIRSF006135|PTHR34848|SSF52540 MEALZ_RS04590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002586|IPR004459|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyric acid synthase CobQ|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00028|PF01656|PF07685|PTHR21343|PTHR21343:SF1|SSF52317|SSF52540|TIGR00313 MEALZ_RS04595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013078|IPR017578|IPR029033 Alpha-ribazole phosphatase, CobC|Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 GO:0009236|GO:0043755 G3DSA:3.40.50.1240|PF00300|PIRSF000709|PTHR23029|SM00855|SSF53254|TIGR03162 MEALZ_RS04600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 MF_00719|PF02654|PTHR34148|PTHR34148:SF1|TIGR00317 MEALZ_RS04605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143100 MEALZ_RS04610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10681|PTHR10681:SF112|SSF52833 MEALZ_RS04615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PF13495|PTHR30349|PTHR30349:SF28 MEALZ_RS04620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002636 Protein from unkown function DUF29 PF01724|PTHR34235|PTHR34235:SF3 MEALZ_RS04625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003200|IPR017846|IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009163|GO:0009236 G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|MF_00230|PF02277|PTHR21712|PTHR21712:SF4|SSF52733|TIGR03160 MEALZ_RS04630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000415|IPR012825|IPR029479 5,6-dimethylbenzimidazole synthase BluB|Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR21712|PTHR21712:SF31|SSF55469|TIGR02476 MEALZ_RS04635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002575|IPR005280|IPR011009 Aminoglycoside phosphotransferase|Homoserine kinase ThrB|Protein kinase-like domain GO:0004413|GO:0009088 G3DSA:3.30.200.20|G3DSA:3.90.1200.10|MF_00301|PF01636|PTHR21064|SSF56112|TIGR00938 MEALZ_RS04640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 MF_00024|PF03186|PTHR34308|PTHR34308:SF1|TIGR00380 MEALZ_RS04645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF3|SSF53383 MEALZ_RS04650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004324|IPR020846 Folate-biopterin transporter|Major facilitator superfamily domain GO:0006810|GO:0016021 PF03092|SSF103473 MEALZ_RS04655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 MEALZ_RS04665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|SSF56954 MEALZ_RS04670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR011009|IPR012810|IPR012811|IPR013780|IPR013781|IPR015902|IPR017853|IPR032091 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Maltogenic Amylase, C-terminal|Protein kinase-like domain|Trehalose synthase/alpha-amylase, N-terminal|Trehalose synthase/probable maltokinase, C-terminal domain GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PF16657|PTHR10357|PTHR10357:SF164|SM00642|SSF51011|SSF51445|SSF56112|TIGR02456|TIGR02457 MEALZ_RS04680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004017|IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR021817|IPR022153 Alpha-helical ferredoxin|Cysteine-rich domain|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Protein of unknown function DUF3400|Protein of unknown function DUF3683 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 PF01565|PF02754|PF02913|PF11880|PF12447|PTHR11748|PTHR11748:SF35|SSF46548|SSF55103|SSF56176 MEALZ_RS04695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR010128|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|ATPase, type I secretion system, PrtD|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0008565|GO:0016021|GO:0016887|GO:0030253|GO:0030256|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24222|PTHR24222:SF0|SM00382|SSF52540|SSF90123|TIGR01842 MEALZ_RS04700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003997|IPR006143|IPR010129 RND efflux pump, membrane fusion protein|RTX secretion protein D, Gram-negative bacteria|Type I secretion membrane fusion protein, HlyD family GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0055085 G3DSA:2.40.50.100|PF00529|PR01490|PTHR30386|PTHR30386:SF3|SSF111369|TIGR01843 MEALZ_RS04705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF3|SSF56954|TIGR01844 MEALZ_RS04710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001343|IPR011049 Haemolysin-type calcium-binding repeat|Serralysin-like metalloprotease, C-terminal GO:0005509 G3DSA:2.150.10.10|PF00353|PR00313|SSF51120 MEALZ_RS04720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010836 SapC PF07277 MEALZ_RS04725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018247 EF-Hand 1, calcium-binding site PS00018 MEALZ_RS04735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF46689|SSF53098 MEALZ_RS04740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 MEALZ_RS04750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS04755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:1.10.287.950 MEALZ_RS04765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610|PTHR33498|PTHR33498:SF1 MEALZ_RS04770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008490 Transposase InsH, N-terminal PF05598|PTHR33408|PTHR33408:SF2 MEALZ_RS04775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005123|IPR006620|IPR023550 Oxoglutarate/iron-dependent dioxygenase|PKHD-type hydroxylase|Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016491|GO:0016705|GO:0016706|GO:0031418|GO:0055114 MF_00657|PF13640|PTHR41536|PTHR41536:SF1|SM00702 MEALZ_RS04800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007809 FlgN-like protein GO:0005515|GO:0044780 G3DSA:1.20.58.300|PF05130|SSF140566 MEALZ_RS04805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007412|IPR031316 Anti-sigma-28 factor FlgM, C-terminal|Anti-sigma-28 factor, FlgM GO:0045892 PF04316|SSF101498|TIGR03824 MEALZ_RS04810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013974|IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal|SAF domain PF13144|PTHR36307|SM00858|TIGR03170 MEALZ_RS04815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002545|IPR011006|IPR024181 CheW-like domain|CheY-like superfamily|Chemotaxis response regulator CheV|Signal transduction response regulator, receiver domain GO:0000160|GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|G3DSA:3.40.50.2300|PF00072|PF01584|PIRSF002867|PTHR22617|PTHR22617:SF30|SM00260|SM00448|SSF50341|SSF52172 MEALZ_RS04820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PTHR24422|PTHR24422:SF9|SM00138|SSF47757|SSF53335 MEALZ_RS04825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001444|IPR006300|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 PF00460|PIRSF002889|PS00588|PTHR30435|PTHR30435:SF12|TIGR01396 MEALZ_RS04830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001444|IPR006299|IPR010930|IPR019776 Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod protein FlgC|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF2|TIGR01395 MEALZ_RS04835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005648|IPR025963|IPR025965 Flagellar hook capping protein|FlgD Ig-like domain|FlgD Tudor-like domain PF03963|PF13860|PF13861|PTHR30435|PTHR30435:SF15 MEALZ_RS04840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001444|IPR010930|IPR011491|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook protein FlgE GO:0071973 PF00460|PF06429|PF07559|PTHR30435|PTHR30435:SF1|SSF117143|TIGR03506 MEALZ_RS04845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001444|IPR010930|IPR012836|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal-body rod FlgF|Flagellar basal-body/hook protein, C-terminal domain GO:0030694|GO:0071973 PF00460|PF06429|PTHR30435|PTHR30435:SF18|SSF117143|TIGR02490|TIGR03506 MEALZ_RS04850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001444|IPR010930|IPR012834|IPR019776|IPR020013 Fagellar hook-basal body protein, FlgE/F/G|Flagellar basal body rod protein, N-terminal|Flagellar basal body rod protein, conserved site|Flagellar basal-body rod FlgG|Flagellar basal-body/hook protein, C-terminal domain GO:0009426|GO:0071973 PF00460|PF06429|PS00588|PTHR30435|PTHR30435:SF19|SSF117143|TIGR02488|TIGR03506 MEALZ_RS04855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MF_00415|PF02107|PR01008|PTHR34933|PTHR34933:SF2 MEALZ_RS04860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MF_00416|PF02119|PR01010|PTHR30381|PTHR30381:SF1 MEALZ_RS04865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002901|IPR013377|IPR019301 Flagellar protein FlgJ, N-terminal|Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain|Peptidoglycan hydrolase FlgJ GO:0004040|GO:0016798|GO:0044780 G3DSA:1.10.530.10|PF01832|PF10135|PR01002|PTHR33308|PTHR33308:SF3|SM00047|TIGR02541 MEALZ_RS04870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001444|IPR002371|IPR010930 Flagellar basal body rod protein, N-terminal|Flagellar basal-body/hook protein, C-terminal domain|Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780|GO:0071973 PF00460|PF06429|PR01005|PTHR30033|PTHR30033:SF1|SSF64518|TIGR02492 MEALZ_RS04875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001029|IPR013384 Flagellar hook-associated protein 3|Flagellin, D0/D1 domain GO:0005198|GO:0009424|GO:0071973 G3DSA:1.20.1330.10|PF00669|PF00700|PTHR30244|PTHR30244:SF5|SSF64518|TIGR02550 MEALZ_RS04880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219 MEALZ_RS04885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR013978 MEKHLA|PAS domain G3DSA:3.30.450.20|PF08670|SSF55785 MEALZ_RS04890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001792|IPR017968 Acylphosphatase, conserved site|Acylphosphatase-like domain G3DSA:3.30.70.100|PF00708|PS00150|PS00151|PTHR10029|SSF54975 MEALZ_RS04895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000241|IPR002052|IPR004114|IPR017244|IPR019614|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Putative RNA methylase domain|Ribosomal RNA large subunit methyltransferase K/L|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase|THUMP domain GO:0003676|GO:0003723|GO:0005737|GO:0008168|GO:0008990|GO:0031167|GO:0032259 G3DSA:3.40.50.150|MF_01858|PF01170|PF02926|PF10672|PIRSF037618|PS00092|PTHR18895|PTHR18895:SF62|SM00981|SSF53335 MEALZ_RS04900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001633 EAL domain G3DSA:3.20.20.450|PF00563|PTHR33121|PTHR33121:SF15|SM00052|SSF141868 MEALZ_RS04905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002121|IPR002562|IPR006292|IPR010997|IPR012337 3'-5' exonuclease domain|HRDC domain|HRDC-like|Ribonuclease D|Ribonuclease H-like domain GO:0000166|GO:0003676|GO:0003824|GO:0005622|GO:0006139|GO:0008033|GO:0008408|GO:0033890|GO:0044237 G3DSA:1.10.150.80|G3DSA:3.30.420.10|MF_01899|PF00570|PF01612|PTHR12124|SM00341|SM00474|SSF47819|SSF53098|TIGR01388 MEALZ_RS04910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|PTHR30483|PTHR30483:SF8|SSF53822 MEALZ_RS04920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS04925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003437|IPR015421|IPR015424|IPR020580|IPR020581 Glycine cleavage system P protein|Glycine cleavage system P-protein, N-terminal|Glycine dehydrogenase (decarboxylating)|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824|GO:0004375|GO:0006544|GO:0006546|GO:0055114 G3DSA:3.40.640.10|MF_00711|PF02347|PTHR11773|PTHR11773:SF1|SSF53383|TIGR00461 MEALZ_RS04930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006222|IPR006223|IPR013977|IPR027266|IPR028896|IPR029043 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein GO:0004047|GO:0005515|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:3.30.70.1400|PF01571|PF08669|PIRSF006487|PTHR13847|PTHR13847:SF209|SSF101790|SSF103025|TIGR00528 MEALZ_RS04935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003607|IPR006675|IPR013976 HD/PDEase domain|HDIG domain|Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SM00471|SSF109604|TIGR00277 MEALZ_RS04940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR001789|IPR011006|IPR013656|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold-4|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF08448|PTHR33121|PTHR33121:SF13|SM00052|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS04945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008972|IPR011706 Cupredoxin|Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|SSF49503 MEALZ_RS04950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PTHR11709|PTHR11709:SF33|SSF49503 MEALZ_RS04955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 MEALZ_RS04960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004881|IPR010914|IPR012340|IPR027417 Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Ribosome biogenesis GTPase RsgA, putative|RsgA type GTPase domain GO:0003924|GO:0005525 G3DSA:1.10.40.50|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01820|PF03193|PTHR32120|PTHR32120:SF2|SSF50249|SSF52540|TIGR00157 MEALZ_RS04965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915|IPR027057|IPR032456 CAAX prenyl protease 1|CAAX prenyl protease 1, N-terminal|Peptidase M48 GO:0004222|GO:0006508|GO:0008233|GO:0071586 G3DSA:3.30.2010.10|PF01435|PF16491|PTHR10120|PTHR10120:SF24 MEALZ_RS04970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012337|IPR013520|IPR022894 Exonuclease, RNase T/DNA polymerase III|Oligoribonuclease|Ribonuclease H-like domain GO:0003676|GO:0016788 G3DSA:3.30.420.10|MF_00045|PF00929|PTHR11046|PTHR11046:SF1|SM00479|SSF53098 MEALZ_RS04975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MF_00454|PF02537|PTHR28259|TIGR00494 MEALZ_RS04980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003793|IPR011322|IPR015867 Domain of unknown function DUF190|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal G3DSA:3.30.70.120|PF02641|PTHR35983|SSF54913 MEALZ_RS04985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|PTHR11778|SSF46589|SSF55681|TIGR00414 MEALZ_RS04990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR37945|SSF53850 MEALZ_RS04995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR000673|IPR000780|IPR001610|IPR001633|IPR022641|IPR022642|IPR029063|IPR029787 Chemotaxis receptor methyltransferase CheR, N-terminal|EAL domain|GGDEF domain|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|Nucleotide cyclase|PAC motif|PAS domain|S-adenosyl-L-methionine-dependent methyltransferase|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008757|GO:0008984 G3DSA:1.10.155.10|G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.150|G3DSA:3.40.50.180|PF00563|PF00990|PF01339|PF01739|PF03705|PF13426|PF13596|PR00996|PTHR24422|PTHR24422:SF6|SM00052|SM00086|SM00091|SM00138|SM00267|SSF141868|SSF47757|SSF52738|SSF53335|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS05000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056|IPR030999 Cytochrome c-like domain|Sulfur oxidation c-type cytochrome SoxX GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626|TIGR04485 MEALZ_RS05005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003733|IPR013785|IPR022998 Aldolase-type TIM barrel|Thiamin phosphate synthase superfamily|Thiamine phosphate synthase GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|PTHR20857|PTHR20857:SF15|SSF51391|TIGR00693 MEALZ_RS05010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013749|IPR029056 Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like G3DSA:3.40.1190.20|PF08543|PTHR20858|SSF53613 MEALZ_RS05015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005265|IPR014351 Conserved hypothetical protein CHP00701|Uncharacterised protein family UPF0093 PF03653|PIRSF004638|PTHR40255|TIGR00701 MEALZ_RS05020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|SSF52833 MEALZ_RS05025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002912|IPR006139|IPR006140|IPR006236|IPR016040|IPR029009|IPR029753 ACT domain|Allosteric substrate binding domain|D-3-phosphoglycerate dehydrogenase|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0004617|GO:0006564|GO:0008152|GO:0016597|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.30.1330.90|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00389|PF01842|PF02826|PS00671|PTHR10996|PTHR10996:SF20|SSF143548|SSF51735|SSF52283|SSF55021|TIGR01327 MEALZ_RS05030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006383|IPR023190|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564|GO:0008152|GO:0016791 G3DSA:1.10.150.210|G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF7|SSF56784|TIGR01488 MEALZ_RS05035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002876|IPR017856|IPR026563|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 2|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.1270.10|G3DSA:3.30.70.980|MF_00693|PF01709|PTHR12532|SSF75625|TIGR01033 MEALZ_RS05045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002176|IPR012337 Crossover junction endodeoxyribonuclease RuvC|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PTHR30194|SSF53098|TIGR00228 MEALZ_RS05050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|DNA helicase, Holliday junction RuvA type, domain III, C-terminal|Helix-hairpin-helix DNA-binding motif, class 1|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|PTHR33796|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 MEALZ_RS05055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|PTHR13779|PTHR13779:SF25|SM00382|SSF46785|SSF52540|TIGR00635 MEALZ_RS05060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006683|IPR006684|IPR014166|IPR029069 Acyl-CoA thioester hydrolase YbgC/YbaW family|HotDog domain|Thioesterase domain|Tol-Pal system-associated acyl-CoA thioesterase GO:0016787|GO:0016790 G3DSA:3.10.129.10|PF03061|PIRSF003230|PTHR31793|PTHR31793:SF9|SSF54637|TIGR00051|TIGR02799 MEALZ_RS05065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898|IPR014163 MotA/TolQ/ExbB proton channel|Tol-Pal system, TolQ GO:0006810|GO:0008565|GO:0015031|GO:0016020|GO:0016021 PF01618|PTHR30625|PTHR30625:SF3|TIGR02796 MEALZ_RS05070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400|IPR014168 Biopolymer transport protein ExbD/TolR|Biopolymer transport, TolR GO:0005215|GO:0006810|GO:0015031|GO:0016020|GO:0016021 PF02472|PTHR30558|PTHR30558:SF7|TIGR02801 MEALZ_RS05075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006260|IPR014161 Tol-Pal system, TolA|TonB, C-terminal GO:0005215|GO:0006810|GO:0016020 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352|TIGR02794 MEALZ_RS05080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007195|IPR011659|IPR014167|IPR015943 Tol-Pal system beta propeller repeat-containing protein, TolB|TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0017038|GO:0042597 G3DSA:2.130.10.10|G3DSA:3.40.50.10070|MF_00671|PF04052|PF07676|PTHR11731|PTHR11731:SF123|SSF52964|SSF69304|TIGR02800 MEALZ_RS05085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006664|IPR006665|IPR006690|IPR014169 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PS01068|PTHR30128|PTHR30128:SF18|SSF103088|TIGR02802 MEALZ_RS05090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR014162|IPR032519 Tetratricopeptide-like helical domain|Tol-Pal system, YbgF|YbgF, trimerisation domain GO:0005515|GO:0070206 G3DSA:1.25.40.10|PF13525|PF16331|PTHR26312|PTHR26312:SF74|SSF48452|TIGR02795 MEALZ_RS05095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007197|IPR013785|IPR024924|IPR027621 7-carboxy-7-deazaguanine synthase-like|Aldolase-type TIM barrel|Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|MF_00917|PF04055|PF13394|PIRSF000370|PTHR11228|PTHR11228:SF6|SSF102114|TIGR04349 MEALZ_RS05100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014729|IPR018317 Queuosine biosynthesis protein QueC|Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|MF_01633|PF06508|PIRSF006293|PTHR11587|PTHR11587:SF3|SSF52402|TIGR00364 MEALZ_RS05110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 MEALZ_RS05115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024530 Putative quorum-sensing-regulated virulence factor PD056452|PF12843|PTHR40613|PTHR40613:SF1 MEALZ_RS05120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004383|IPR007197|IPR013785 Aldolase-type TIM barrel|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0051536 G3DSA:3.20.20.70|PF04055|PIRSF006004|PTHR30544|SSF102114|TIGR00048 MEALZ_RS05125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009739 Protein of unknown function DUF1311 PF07007 MEALZ_RS05130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001969|IPR011969|IPR021109 Aspartic peptidase domain|Aspartic peptidase, active site|Clan AA aspartic peptidase, C-terminal GO:0004190|GO:0006508 PF13975|PS00141|PTHR41535|PTHR41535:SF1|SSF50630|TIGR02281 MEALZ_RS05155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902|IPR022346 General secretion pathway, GspH|Prokaryotic N-terminal methylation site GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF12019|PF13633|PS00409|SSF54523|TIGR02532 MEALZ_RS05160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13544|PS00409 MEALZ_RS05170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PS00409 MEALZ_RS05185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase SSF52540 MEALZ_RS05190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008876|IPR010985|IPR013321 Arc-type ribbon-helix-helix|Relaxosome protein TraY|Ribbon-helix-helix GO:0000746|GO:0003677|GO:0006355 G3DSA:1.10.1220.10|PF05509|SSF47598 MEALZ_RS05195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR35601|PTHR35601:SF1|SSF143011 MEALZ_RS05205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007404 LexA-binding, inner membrane-associated putative hydrolase PF04307|PTHR35531|PTHR35531:SF1 MEALZ_RS05230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001126|IPR017961|IPR024728|IPR025188 DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|Domain of unknown function DUF4113|UmuC domain GO:0003684|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|PF00817|PF11798|PF11799|PF13438|PTHR11076|PTHR11076:SF40|SSF100879|SSF56672 MEALZ_RS05235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006197|IPR015927|IPR019759|IPR028360 Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677|GO:0006355 G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|PTHR33516:SF1|SSF51306 MEALZ_RS05250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR33271|PTHR33271:SF6|SSF51182 MEALZ_RS05255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006197|IPR015927|IPR019759|IPR028360 Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C GO:0003677|GO:0006355 G3DSA:2.10.109.10|PF00717|PR00726|PTHR33516|PTHR33516:SF1|SSF51306 MEALZ_RS05260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|PTHR33516|PTHR33516:SF2|SSF46785|SSF51306|TIGR00498 MEALZ_RS05270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006119|IPR006120|IPR009057 Homeodomain-like|Resolvase, HTH domain|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:1.20.5.40|PF00239|PF02796|PTHR30461|PTHR30461:SF9|SSF46689|SSF53041 MEALZ_RS05275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR33271|PTHR33271:SF6|SSF51182 MEALZ_RS05290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain PF01610|PF13542|PTHR33498|PTHR33498:SF1 MEALZ_RS05300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, Tn5-like, core GO:0003676 G3DSA:3.90.350.10|SSF53098 MEALZ_RS05310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 G3DSA:3.90.80.10|PF00719|SSF50324 MEALZ_RS05315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF23|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 MEALZ_RS05320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 MEALZ_RS05325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025517 Domain of unknown function DUF4405 PF14358 MEALZ_RS05330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|PTHR23026|PTHR23026:SF102|SSF55469 MEALZ_RS05335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353 MEALZ_RS05340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003018|IPR013976|IPR029016 GAF domain|GAF domain-like|Metal-dependent hydrolase HDOD GO:0005515 G3DSA:1.10.3150.10|G3DSA:3.30.450.40|PF01590|PF08668|PTHR33525|PTHR33525:SF3|SM00065|SSF109604|SSF55781 MEALZ_RS05355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 MEALZ_RS05360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR003781|IPR013816|IPR016040|IPR016102|IPR016181|IPR032875 ATP-grasp fold, subdomain 2|Acyl-CoA N-acyltransferase|CoA-binding|GNAT domain|NAD(P)-binding domain|Succinyl-CoA synthetase-like|Succinyl-CoA synthetase-like, flavodoxin domain GO:0005524|GO:0008080|GO:0048037 G3DSA:3.30.470.20|G3DSA:3.40.50.261|G3DSA:3.40.50.720|G3DSA:3.40.630.30|PF00583|PF13380|PF13549|PF13607|PTHR11117|PTHR11117:SF8|SM00881|SSF51735|SSF52210|SSF55729|SSF56059 MEALZ_RS05365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007296 Domain of unknown function DUF403 PF04168|PTHR34595|PTHR34595:SF2 MEALZ_RS05370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016450|IPR025841 Circularly permuted ATP-grasp type 2|Uncharacterised conserved protein UCP005522 PF14403|PIRSF005522|PTHR34595|PTHR34595:SF3|SSF56059 MEALZ_RS05375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR32145|PTHR32145:SF7|SM00849|SSF56281 MEALZ_RS05380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PTHR33121|PTHR33121:SF10|SM00052|SM00267|SSF141868|SSF55073|TIGR00254 MEALZ_RS05385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 MEALZ_RS05390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006379|IPR006381|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IIB|HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 G3DSA:3.30.980.20|G3DSA:3.40.50.1000|PF08282|PTHR10000|PTHR10000:SF19|SSF56784|TIGR01484|TIGR01486 MEALZ_RS05395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001633|IPR018842|IPR029151 EAL domain|Periplasmic sensor domain-like|YkuI, C-terminal G3DSA:3.20.20.450|G3DSA:3.30.450.20|PF00563|PF10388|PTHR33121|PTHR33121:SF17|SM00052|SSF103190|SSF141868 MEALZ_RS05410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001727 Uncharacterised protein family UPF0016 GO:0016020 PF01169|PTHR12608 MEALZ_RS05415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR11040|PTHR11040:SF33 MEALZ_RS05420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR021147|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF697 GO:0005525 G3DSA:3.40.50.300|PF01926|PF05128|SSF52540 MEALZ_RS05425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|PF01926|SSF52540 MEALZ_RS05435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR006153|IPR014710|IPR018422|IPR018490 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold GO:0006812|GO:0015299|GO:0016021|GO:0055085 G3DSA:2.60.120.10|PF00027|PF00999|PTHR10110|PTHR10110:SF86|SM00100|SSF51206 MEALZ_RS05445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR000253|IPR008984|IPR029787|IPR032030 Forkhead-associated (FHA) domain|GGDEF domain|Nucleotide cyclase|SMAD/FHA domain|YscD, cytoplasmic domain GO:0005515 G3DSA:2.60.200.20|G3DSA:3.30.70.270|PF00990|PF16697|PTHR10799|PTHR10799:SF710|SM00240|SM00267|SSF49879|SSF55073|TIGR00254 MEALZ_RS05450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|SSF55811 MEALZ_RS05455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000005|PTHR33751|PTHR33751:SF3|SSF46626 MEALZ_RS05465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001891|IPR012301|IPR012302|IPR015884|IPR016040 Malic enzyme, N-terminal domain|Malic enzyme, NAD-binding|Malic enzyme, conserved site|Malic oxidoreductase|NAD(P)-binding domain GO:0004470|GO:0004471|GO:0006108|GO:0051287|GO:0055114 G3DSA:3.40.50.10380|G3DSA:3.40.50.720|PF00390|PF03949|PIRSF000106|PR00072|PS00331|PTHR23406|PTHR23406:SF25|SM00919|SM01274|SSF51735|SSF53223 MEALZ_RS05470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000811|IPR011833 Glycogen/starch/alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PIRSF000460|PS00102|PTHR11468|PTHR11468:SF3|SSF53756|TIGR02093 MEALZ_RS05475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001737|IPR011530|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PTHR11727|SM00650|SSF53335|TIGR00755 MEALZ_RS05480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005255|IPR024084 4-hydroxythreonine-4-phosphate dehydrogenase PdxA|Isopropylmalate dehydrogenase-like domain GO:0008615|GO:0016616|GO:0050570|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_00536|PF04166|PTHR30004|PTHR30004:SF5|SSF53659|TIGR00557 MEALZ_RS05490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021212 Domain of unknown function DUF2760 PF10816 MEALZ_RS05495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013126|IPR018181 Heat shock protein 70 family|Heat shock protein 70, conserved site G3DSA:3.30.420.40|PF00012|PR00301|PS00297|PS00329|PTHR19375|PTHR19375:SF226|SSF53067 MEALZ_RS05500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013126|IPR021030 Heat shock protein 70 family|Protein of unknown function DUF3731 G3DSA:3.30.420.40|PF00012|PF12531|PR00301|PTHR19375|PTHR19375:SF226|SSF53067 MEALZ_RS05505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR025640 Band 7 domain|Domain of unknown function DUF4339 PF13421|PF14237|PTHR37826|PTHR37826:SF2|SSF117892 MEALZ_RS05510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR37826|PTHR37826:SF1 MEALZ_RS05515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS, type 1|DNA mismatch repair protein MutS-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|PTHR11361|PTHR11361:SF86|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 MEALZ_RS05520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008136 CinA, C-terminal G3DSA:3.90.950.20|PF02464|PTHR13939|SSF142433|TIGR00199 MEALZ_RS05525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000683|IPR004104|IPR016040 NAD(P)-binding domain|Oxidoreductase, C-terminal|Oxidoreductase, N-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PF02894|PTHR22604|SSF51735|SSF55347 MEALZ_RS05530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015168 SsuA/THI5-like G3DSA:3.40.190.10|PF09084|PTHR30024|SSF53850 MEALZ_RS05535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS05540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS05545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|PTHR24220|SM00382|SSF50331|SSF52540 MEALZ_RS05550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 MEALZ_RS05555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00022_B|PF00749|PR00987|PS00178|PTHR11451|PTHR11451:SF41|SSF48163|SSF52374|TIGR00464 MEALZ_RS05575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|PTHR30295|PTHR30295:SF9|SSF47240|TIGR00754 MEALZ_RS05580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023824 Conserved hypothetical protein CHP04073, exosortase-affiliated TIGR04073 MEALZ_RS05585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF0|SSF102405|TIGR00730 MEALZ_RS05595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR11360|PTHR11360:SF135|SSF103473 MEALZ_RS05600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004099|IPR006324|IPR012999|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Glutathione-disulphide reductase|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004362|GO:0006749|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0050661|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF106|SSF51905|SSF55424|TIGR01424 MEALZ_RS05605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336|IPR013740 Redoxin|Thioredoxin-like fold GO:0016491 G3DSA:3.40.30.10|PF08534|PTHR10430|PTHR10430:SF19|SSF52833 MEALZ_RS05610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009078|IPR012347|IPR030907 Ferritin-like protein|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|SSF47240|TIGR04535 MEALZ_RS05615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021804 Protein of unknown function DUF3375 PF11855 MEALZ_RS05620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025449 Protein of unknown function DUF4194 PF13835 MEALZ_RS05625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.1140.10|G3DSA:3.40.50.300|PF13555|PF13558|SSF52540 MEALZ_RS05630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720 MEALZ_RS05635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014544|IPR024534|IPR024537 Domain of unknown function DUF2220|Domain of unknown function DUF3322|Uncharacterised conserved protein UCP028408 PF09983|PF11795|PIRSF028408 MEALZ_RS05640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF97|SSF52091 MEALZ_RS05645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR013196 Helix-turn-helix, type 11|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.1380.20|PF08279|SSF46785 MEALZ_RS05650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001486|IPR009050|IPR012292|IPR016339|IPR019795 Globin, bacterial-like, conserved site|Globin-like|Globin/Protoglobin|Truncated hemoglobin|Truncated hemoglobin, group 1 GO:0015671|GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|PIRSF002030|PS01213|PTHR10681|PTHR10681:SF116|SSF46458 MEALZ_RS05655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001041|IPR001221|IPR001433|IPR001709|IPR008333|IPR012675|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0009055|GO:0016491|GO:0051536|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|PF00111|PF00175|PF00970|PR00371|PR00410|PTHR19370|SSF52343|SSF54292|SSF63380 MEALZ_RS05665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|SSF46626 MEALZ_RS05670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PTHR10422|PTHR10422:SF24|SSF81442 MEALZ_RS05675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002725 Protein of unknown function DUF45 PF01863|PTHR30399 MEALZ_RS05680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 MEALZ_RS05685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR029063 Major facilitator superfamily domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01564|PTHR11558|PTHR11558:SF4|SSF103473|SSF53335 MEALZ_RS05690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007138|IPR011008 Antibiotic biosynthesis monooxygenase domain|Dimeric alpha-beta barrel G3DSA:3.30.70.900|PF03992|PTHR33336|PTHR33336:SF1|SSF54909 MEALZ_RS05695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|PTHR11496|PTHR11496:SF68|SSF56796 MEALZ_RS05700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF56801 MEALZ_RS05705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005265 Uncharacterised protein family UPF0093 PF03653|PIRSF004638 MEALZ_RS05710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019251 Domain of unknown function DUF2231, transmembrane PF09990 MEALZ_RS05715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001505|IPR002429|IPR008972|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II GO:0004129|GO:0005507|GO:0016020|GO:0016021|GO:0016491 G3DSA:2.60.40.420|PF00116|PS00078|PTHR22888|PTHR22888:SF2|SSF49503|TIGR02866 MEALZ_RS05720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000298|IPR000883|IPR013833|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0015002|GO:0016020|GO:0016021|GO:0020037|GO:0022900|GO:0022904|GO:0055114 G3DSA:1.20.120.80|G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF6|SSF81442|SSF81452|TIGR02891 MEALZ_RS05730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related PF09678 MEALZ_RS05735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003386|IPR029058 Alpha/Beta hydrolase fold|Lecithin:cholesterol/phospholipid:diacylglycerol acyltransferase GO:0006629|GO:0008374 G3DSA:3.40.50.1820|PF02450|SSF53474 MEALZ_RS05745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001099|IPR012328|IPR016039 Chalcone/stilbene synthase, C-terminal|Chalcone/stilbene synthase, N-terminal|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00195|PF02797|PTHR11877|PTHR11877:SF10|SSF53901 MEALZ_RS05750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143100 MEALZ_RS05755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025587 Domain of unknown function DUF4351 PF14261 MEALZ_RS05760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|SSF81301 MEALZ_RS05765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|PTHR10108:SF925|SSF53335 MEALZ_RS05770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR006935|IPR014001|IPR015927|IPR025202|IPR027417|IPR028360 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B/S26C|Phospholipase D-like domain GO:0003677|GO:0005524|GO:0016787 G3DSA:2.10.109.10|G3DSA:3.30.870.10|G3DSA:3.40.50.300|PF00271|PF04851|PF13091|PTHR24031|PTHR24031:SF210|SM00487|SM00490|SSF51306|SSF52540|SSF56024 MEALZ_RS05785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009003 Peptidase S1, PA clan SSF50494 MEALZ_RS05790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR006935|IPR007560|IPR011335|IPR011856|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease type II-like|Restriction endonuclease type IV, Mrr|tRNA endonuclease-like domain GO:0003676|GO:0003677|GO:0004518|GO:0004519|GO:0005524|GO:0009307|GO:0016787 G3DSA:3.40.1350.10|G3DSA:3.40.50.300|PF00271|PF04471|PF04851|PTHR30195|PTHR30195:SF3|SM00487|SM00490|SSF52540|SSF52980 MEALZ_RS05795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR013324 RNA polymerase sigma factor, region 3/4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|SSF88659 MEALZ_RS05810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|PTHR33571|PTHR33571:SF1|SSF81301 MEALZ_RS05815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008201 Protein of unknown function DUF86 G3DSA:1.20.120.580|PF01934|PTHR34139 MEALZ_RS05825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008490|IPR025668 Transposase DDE domain|Transposase InsH, N-terminal PF05598|PF13751|PTHR33408|PTHR33408:SF2 MEALZ_RS05830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS05835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system PF11903 MEALZ_RS05840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin PF15781|SSF143011 MEALZ_RS05845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012547|IPR018631|IPR027417 AAA-ATPase-like domain|P-loop containing nucleoside triphosphate hydrolase|PD-(D/E)XK nuclease superfamily 9 G3DSA:3.40.50.300|PF08011|PF09820|PTHR34825|PTHR34825:SF1|SSF52540 MEALZ_RS05850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022148 CopG antitoxin PF12441 MEALZ_RS05860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005534 Curli production assembly/transport component CsgG GO:0030288 PF03783|PTHR41164|PTHR41164:SF1 MEALZ_RS05865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR014508 Tetratricopeptide-like helical domain|Uncharacterised conserved protein withTPR-like repeats GO:0005515 G3DSA:1.25.40.10|PF16068|PIRSF020555|SSF48452 MEALZ_RS05870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008517 Protein of unknown function DUF799 PF05643 MEALZ_RS05875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13673|PTHR36449|SSF55729 MEALZ_RS05880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR014795 Ribbon-helix-helix|Vibrio phage ICP1, Orf50 GO:0006355 G3DSA:1.20.5.780|PF08681|PTHR35401|PTHR35401:SF1|SSF47598 MEALZ_RS05885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009045|IPR024019 Conserved hypothetical protein CHP04096|Hedgehog signalling/DD-peptidase zinc-binding domain G3DSA:3.30.1380.10|SSF55166|TIGR04096 MEALZ_RS05890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF45|SSF53383 MEALZ_RS05895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018649 SHOCT domain PF09851 MEALZ_RS05900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007527 Zinc finger, SWIM-type GO:0008270 PF04434|PTHR38133|PTHR38133:SF1 MEALZ_RS05905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 MEALZ_RS05910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336|IPR023169 Thioredoxin-like fold|UPF0413, central domain G3DSA:1.10.472.60|G3DSA:3.40.30.10|PF13743|PTHR13887|SSF52833 MEALZ_RS05915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PF03734|PTHR36699|SSF141523 MEALZ_RS05920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000667|IPR012338 Beta-lactamase/transpeptidase-like|Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 G3DSA:3.40.710.10|PF02113|PR00922|PTHR30023|PTHR30023:SF0|SSF56601 MEALZ_RS05925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004644|IPR005130|IPR005131|IPR029009 Allosteric substrate binding domain|Iron-sulphur-dependent L-serine dehydratase single chain form|Serine dehydratase beta chain|Serine dehydratase-like, alpha subunit GO:0003941|GO:0006094|GO:0051539 G3DSA:3.30.1330.90|PF03313|PF03315|PTHR30182|PTHR30182:SF1|SSF143548|TIGR00720 MEALZ_RS05930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|PTHR37423|SSF48452|TIGR03302 MEALZ_RS05935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF73|SM00363|SSF55120|SSF55174|TIGR00005 MEALZ_RS05940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003730|IPR011324 Cytotoxic necrotizing factor-like, catalytic|Multi-copper polyphenol oxidoreductase, laccase G3DSA:3.60.140.10|PF02578|PTHR30616|PTHR30616:SF3|SSF64438|TIGR00726 MEALZ_RS05945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR16950 MEALZ_RS05955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF2|SSF53738|SSF55957 MEALZ_RS05960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR36699|SSF141523 MEALZ_RS05965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021793 Major outer membrane lipoprotein Oprl PF11839 MEALZ_RS05975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005490|IPR018392 L,D-transpeptidase catalytic domain|LysM domain GO:0016740 G3DSA:2.40.440.10|G3DSA:3.10.350.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 MEALZ_RS05980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007476 Putative exonuclease, RdgC GO:0006310 MF_00194|PF04381|PTHR38103|PTHR38103:SF1 MEALZ_RS05985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005122|IPR026353 Hypoxanthine-DNA glycosylase|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|SM00986|SM00987|SSF52141|TIGR04274 MEALZ_RS05995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006839|IPR023153 PSPTO4464-like domain|Ribosome-associated, YjgA G3DSA:1.10.60.30|PF04751|PIRSF016183|PTHR38101|PTHR38101:SF1|SSF158710 MEALZ_RS06000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001126|IPR017961|IPR022880|IPR024728 DNA polymerase IV|DNA polymerase type-Y, HhH motif|DNA polymerase, Y-family, little finger domain|UmuC domain GO:0003684|GO:0003887|GO:0006281 G3DSA:1.10.150.20|G3DSA:3.30.1490.100|G3DSA:3.30.70.270|MF_01113|PF00817|PF11798|PF11799|PTHR11076|PTHR11076:SF32|SSF100879|SSF56672 MEALZ_RS06005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025498 Protein of unknown function DUF4389 PF14333 MEALZ_RS06010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016936 Uncharacterised conserved protein UCP029693 PF10095|PIRSF029693 MEALZ_RS06015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR004107|IPR011010|IPR011931|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|PTHR30349|PTHR30349:SF17|SSF56349|TIGR02224 MEALZ_RS06020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007435 Protein of unknown function DUF484 PF04340|PTHR38765 MEALZ_RS06025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|PTHR31689|SSF54506|TIGR00652 MEALZ_RS06030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR022653|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|PS00878|PS00879|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR01048 MEALZ_RS06035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF7|TIGR00786 MEALZ_RS06040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011|PTHR35011:SF4 MEALZ_RS06045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000189|IPR008258|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PS00922|PTHR21666|PTHR21666:SF219|SSF53955 MEALZ_RS06055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|SSF81301 MEALZ_RS06060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|PTHR21666|SSF51261 MEALZ_RS06090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000983|IPR012902|IPR031982 Bacterial general secretion pathway protein G-type pilin|Prokaryotic N-terminal methylation site|Type IV minor pilin ComP GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF07963|PF16732|PR00813|PS00409|PTHR30093|PTHR30093:SF4|SSF54523|TIGR02532 MEALZ_RS06095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|PTHR36966|PTHR36966:SF1|SM01321|SSF143422 MEALZ_RS06100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR35586 MEALZ_RS06105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR34107|SSF52980 MEALZ_RS06110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013829 Haemagglutinin, stalk GO:0019031|GO:0019064|GO:0046789 G3DSA:3.90.20.10|SSF58064 MEALZ_RS06120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001261|IPR002933|IPR005941|IPR011650 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0006508|GO:0008152|GO:0008237|GO:0009014|GO:0009089|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|MF_01690|PF01546|PF07687|PS00759|PTHR11014|PTHR11014:SF106|SSF53187|SSF55031|TIGR01246 MEALZ_RS06125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006504|IPR006660|IPR012336 Arsenate reductase-like|Thioredoxin-like fold|Transcriptional regulator Spx/MgsR G3DSA:3.40.30.10|PF03960|PTHR30041|PTHR30041:SF3|SSF52833|TIGR01617 MEALZ_RS06135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS06140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR005664|IPR011004|IPR018357|IPR023180 Hexapeptide repeat|Hexapeptide transferase, conserved site|Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family|Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1|Trimeric LpxA-like GO:0008666|GO:0009089|GO:0016740 G3DSA:1.10.166.10|G3DSA:2.160.10.10|MF_00811|PF00132|PF14602|PF14805|PS00101|PTHR19136|PTHR19136:SF52|SSF51161|TIGR00965 MEALZ_RS06145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR019878 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0003824|GO:0009016|GO:0009058|GO:0009089|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR11751|PTHR11751:SF354|SSF53383|TIGR03538 MEALZ_RS06150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF1 MEALZ_RS06155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016457|IPR029035 DHS-like NAD/FAD-binding domain|Formylmethanofuran dehydrogenase, subunit B GO:0015948|GO:0018493 G3DSA:3.40.50.1220|PIRSF005646|SSF52467|TIGR03129 MEALZ_RS06160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011059|IPR012027|IPR013108|IPR032466 Amidohydrolase 3|Formylmethanofuran dehydrogenase, subunit A|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016810 G3DSA:2.30.40.10|PF07969|PIRSF006453|SSF51338|SSF51556|TIGR03121 MEALZ_RS06165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025427 Protein of unknown function DUF4160 PF13711 MEALZ_RS06170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018841 Protein of unknown function DUF2442 G3DSA:3.30.2020.10|PF10387|SSF143880 MEALZ_RS06175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007367|IPR009057|IPR011991 Homeodomain-like|Protein of unknown function DUF433|Winged helix-turn-helix DNA-binding domain GO:0003677 G3DSA:1.10.10.10|PF04255|PTHR34849|PTHR34849:SF5|SSF46689 MEALZ_RS06185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002770|IPR014053|IPR022667|IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr|Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal|Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal|Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain GO:0006730|GO:0016740|GO:0030270 G3DSA:3.30.70.520|MF_00579|PF01913|PF02741|PIRSF006414|SSF55112|TIGR03119 MEALZ_RS06190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002489|IPR017550 Formylmethanofuran dehydrogenase subunit C|Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0015948|GO:0016491|GO:0018493|GO:0046914|GO:0055114 G3DSA:2.160.20.60|PF01493|PTHR39673|PTHR39673:SF3|SSF69336|TIGR03122 MEALZ_RS06200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021698 Protein of unknown function DUF2380 PF11684 MEALZ_RS06205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR005561|IPR008327|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF03861|PIRSF036382|PTHR26402|PTHR26402:SF567|SM01012|SSF52172 MEALZ_RS06210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23515|PTHR23515:SF2|SSF103473 MEALZ_RS06215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005117|IPR006066|IPR006067|IPR007419|IPR012744|IPR017121|IPR023753 BFD-like [2Fe-2S]-binding domain|FAD/NAD(P)-binding domain|Nitrite reductase [NAD(P)H] large subunit, NirB|Nitrite reductase [NAD(P)H], large subunit|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0008942|GO:0016491|GO:0020037|GO:0042128|GO:0050660|GO:0050661|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.50.50.60|PF01077|PF03460|PF04324|PF07992|PIRSF037149|PR00368|PR00397|PR00411|PS00365|PTHR11493|PTHR11493:SF52|SSF51905|SSF55124|SSF56014|TIGR02374 MEALZ_RS06220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012748|IPR017941 Nitrite reductase [NAD(P)H] small subunit, NirD|Rieske [2Fe-2S] iron-sulphur domain GO:0008942|GO:0016491|GO:0042128|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF13806|PTHR40562|SSF50022|TIGR02378 MEALZ_RS06225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 G3DSA:3.10.310.10|PF02567|PIRSF016184|PTHR13774|PTHR13774:SF15|SSF54506|TIGR00654 MEALZ_RS06230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003712|IPR008076|IPR010982 Cyanate hydratase|Cyanate lyase, C-terminal|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0008824|GO:0009439 G3DSA:1.10.260.40|G3DSA:3.30.1160.10|MF_00535|PF02560|PIRSF001263|PR01693|PTHR34186|PTHR34186:SF2|SM01116|SSF47413|SSF55234|TIGR00673 MEALZ_RS06235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR001932|IPR008266|IPR011009 PPM-type phosphatase domain|Protein kinase domain|Protein kinase-like domain|Tyrosine-protein kinase, active site GO:0003824|GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|G3DSA:3.60.40.10|PF00069|PF13672|PS00109|PTHR24362|PTHR24362:SF160|SM00331|SM00332|SSF56112|SSF81606 MEALZ_RS06240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000292|IPR023271 Aquaporin-like|Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1080.10|PF01226|PTHR30520 MEALZ_RS06245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005240|IPR016064 NAD kinase/diacylglycerol kinase-like domain|Protein of unknown function DUF389 PF04087|PTHR20992|SSF111331|TIGR00341 MEALZ_RS06250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007829 TM2 domain PF05154 MEALZ_RS06255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PIRSF006276|PR01438|PTHR31964|SSF52402 MEALZ_RS06265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417|IPR032524|IPR032781 AAA+ ATPase domain|ABC transporter Uup, C-terminal|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PF16326|PS00211|PTHR19211|PTHR19211:SF49|SM00382|SSF52540 MEALZ_RS06275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|SSF51905 MEALZ_RS06280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 MEALZ_RS06285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001789|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PTHR24423|SM00267|SM00448|SSF52172|SSF55073|TIGR00254 MEALZ_RS06290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:3.30.460.10 MEALZ_RS06295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PR00413|PTHR18901|SSF56784|TIGR01509 MEALZ_RS06305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001505|IPR002429|IPR008972 Copper centre Cu(A)|Cupredoxin|Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 G3DSA:2.60.40.420|PF00116|PS00078|PTHR22888|PTHR22888:SF12|SSF49503 MEALZ_RS06310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000883|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I domain GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PTHR10422|PTHR10422:SF17|SSF81442 MEALZ_RS06315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056|IPR024167 Cytochrome c-like domain|Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF00034|PF13442|PIRSF000005|PTHR33751|PTHR33751:SF3|SSF46626 MEALZ_RS06320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF158|SSF69572 MEALZ_RS06325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|PTHR10772|SM00883|SSF50129 MEALZ_RS06330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|PTHR11353|SSF48592|SSF52029|TIGR02348 MEALZ_RS06335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009778|IPR023534 Modulator of Rho-dependent transcription termination|Rof/RNase P-like PF07073|SSF101744 MEALZ_RS06340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019291 Host attachment protein PF10116 MEALZ_RS06345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF46689|SSF53098 MEALZ_RS06350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002611|IPR027417|IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SSF52540 MEALZ_RS06355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain PF01610|PF13542|PTHR33498|PTHR33498:SF1 MEALZ_RS06360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001501|IPR018194|IPR029014 NiFe hydrogenase-like|Nickel-dependent hydrogenase, large subunit|Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 G3DSA:1.10.645.10|PF00374|PS00507|PS00508|PTHR11993|PTHR11993:SF9|SSF56762 MEALZ_RS06365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 G3DSA:3.40.50.700|PF01058|PTHR11995|PTHR11995:SF6|SSF56770 MEALZ_RS06370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000283|IPR001041|IPR012675|IPR016214|IPR019574 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|NAD-reducing hydrogenase, HoxS gamma subunit|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site|NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0008137|GO:0009055|GO:0016020|GO:0016491|GO:0042773|GO:0051536|GO:0055114 G3DSA:3.10.20.30|G3DSA:3.30.70.20|PF10588|PF13459|PF13510|PIRSF000309|PS00642|PTHR11615|PTHR11615:SF38|SM00929|SSF54292|SSF54862 MEALZ_RS06375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001949|IPR011538|IPR012336|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 PF01257|PF01512|PF10589|PS00644|PS00645|PTHR11780|PTHR11780:SF0|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 MEALZ_RS06380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006664|IPR006665|IPR011250|IPR027385|IPR028974 OmpA-like domain|Outer membrane protein beta-barrel|Outer membrane protein, bacterial|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|TSP type-3 repeat GO:0005509|GO:0009279|GO:0016021 G3DSA:2.40.160.20|G3DSA:3.30.1330.60|G3DSA:4.10.1080.10|PF00691|PF13505|PR01021|PTHR30128|PTHR30128:SF10|SSF103088|SSF103647|SSF56925 MEALZ_RS06385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011031|IPR012286 Multihaem cytochrome|Tetrahaem cytochrome domain G3DSA:1.10.1130.10|G3DSA:1.10.780.10|SSF48695 MEALZ_RS06390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR029063 Major facilitator superfamily domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:1.20.1250.20|G3DSA:3.40.50.150|SSF103473|SSF53335 MEALZ_RS06395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006716 ERG2/sigma1 receptor-like PF04622|PTHR10868|PTHR10868:SF1 MEALZ_RS06400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001171|IPR018083 Ergosterol biosynthesis ERG4/ERG24|Sterol reductase, conserved site GO:0016020|GO:0016628|GO:0055114 PF01222|PS01017|PS01018|PTHR21257 MEALZ_RS06410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006158|IPR006638|IPR007197|IPR023404|IPR023970|IPR027564 Cobalamin (vitamin B12)-binding domain|Elongator protein 3/MiaB/NifB|Hopanoid C-3 methylase HpnR|Methylthiotransferase/radical SAM-type protein|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0031419|GO:0046872|GO:0051536 G3DSA:3.40.50.280|G3DSA:3.80.30.20|PF02310|PF04055|PTHR11918|PTHR11918:SF69|SM00729|SSF102114|SSF52242|TIGR04367 MEALZ_RS06420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001453|IPR005110|IPR005111|IPR008284 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 MEALZ_RS06425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056|IPR025710 Cytochrome c-like domain|SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 G3DSA:1.10.760.10|PIRSF038455|SSF46626|TIGR04484 MEALZ_RS06430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013783|IPR014756|IPR014880|IPR030995 Immunoglobulin E-set|Immunoglobulin-like fold|Sulphur oxidation protein SoxZ|Thiosulfate oxidation carrier complex protein SoxZ G3DSA:2.60.40.10|PF08770|SSF81296|TIGR04490 MEALZ_RS06435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016568|IPR032711 Ig-like SoxY domain|Sulphur oxidation, SoxY PF13501|PIRSF010312|TIGR04488 MEALZ_RS06445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005361 Uncharacterised protein family UPF0158 PF03682 MEALZ_RS06450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 MEALZ_RS06455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008457 Copper resistance protein D GO:0016021 PF05425|PTHR34820 MEALZ_RS06460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007348|IPR014755|IPR014756 CopC domain|Copper resistance protein CopC/internalin, immunoglobulin-like|Immunoglobulin E-set GO:0005507|GO:0042597|GO:0046688 G3DSA:2.60.40.1220|PF04234|SSF81296 MEALZ_RS06465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004869|IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN|Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|PTHR33406:SF2|SSF82866|TIGR03480 MEALZ_RS06475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|SM00347|SSF46785 MEALZ_RS06485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PF01740|PTHR11814|PTHR11814:SF76|SSF52091 MEALZ_RS06490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PR01438|SSF52402 MEALZ_RS06495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300 MEALZ_RS06500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF15|SSF53383 MEALZ_RS06505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002225|IPR016040 3-beta hydroxysteroid dehydrogenase/isomerase|NAD(P)-binding domain GO:0003854|GO:0006694|GO:0016616|GO:0055114 G3DSA:3.40.50.720|PF01073|PTHR10366|SSF51735 MEALZ_RS06510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF52|SSF52540 MEALZ_RS06515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007899 CHAD domain PF05235|PTHR39339|PTHR39339:SF1|SM00880 MEALZ_RS06520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013078|IPR029033 Histidine phosphatase superfamily|Histidine phosphatase superfamily, clade-1 G3DSA:3.40.50.1240|PF00300|PTHR20935|SM00855|SSF53254 MEALZ_RS06525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011862|IPR024370 PBP domain|Phosphate binding protein GO:0006810 G3DSA:3.40.190.10|PF12849|PTHR30570|PTHR30570:SF5|SSF53850|TIGR02136 MEALZ_RS06530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR015943 ABC transporter type 1, transmembrane domain MetI-like|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0006810|GO:0016020 G3DSA:1.10.3720.10|G3DSA:2.130.10.10|PF00528|PTHR30425|PTHR30425:SF3|SSF101908|SSF161098 MEALZ_RS06535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR005672 ABC transporter type 1, transmembrane domain MetI-like|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|PTHR30425|PTHR30425:SF7|SSF161098|TIGR00974 MEALZ_RS06540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF585|SM00382|SSF52540|TIGR00972 MEALZ_RS06550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 MEALZ_RS06555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000943|IPR007627|IPR007630|IPR011991|IPR012759|IPR013324|IPR013325|IPR014284|IPR016263 RNA polymerase sigma factor RpoH, proteobacteria|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006351|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00961|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PS00716|PTHR30376|SSF88659|SSF88946|TIGR02392|TIGR02937 MEALZ_RS06560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|PTHR30037|PTHR30037:SF4|SSF48150 MEALZ_RS06565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016634|IPR026881 Transcription regulator, DeoR type, predicted|WYL domain PF13280|PIRSF015558 MEALZ_RS06570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006474|IPR006483|IPR006674|IPR006935|IPR014001|IPR027417 CRISPR-associated Cas3-HD domain|HD domain|Helicase Cas3, CRISPR-associated, core|Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:1.10.3210.10|G3DSA:3.40.50.300|PF04851|SM00487|SSF109604|SSF52540|TIGR01587|TIGR01596 MEALZ_RS06575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010155|IPR013422|IPR021124 CRISPR pre-crRNA endoribonuclease Cas5d|CRISPR-associated protein Cas5, N-terminal|CRISPR-associated protein, Cas5 GO:0004519|GO:0043571|GO:0051607 PF09704|TIGR01876|TIGR02593 MEALZ_RS06580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010144 CRISPR-associated protein, Csd1-type PF09709|TIGR01863 MEALZ_RS06585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006482|IPR013418 CRISPR-associated protein Cas7, subtype I-B/I-C|CRISPR-associated protein Csd2 PF05107|TIGR01595|TIGR02589 MEALZ_RS06590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013343|IPR022765 CRISPR-associated protein Cas4|Dna2/Cas4, domain of unknown function DUF83 PF01930|PTHR36531|TIGR00372 MEALZ_RS06595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002729|IPR019856 CRISPR-associated protein Cas1|CRISPR-associated protein Cas1, DVULG subtype MF_01470|PF01867|PTHR34353|PTHR34353:SF2|TIGR00287|TIGR03640 MEALZ_RS06600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR019199|IPR021127 CRISPR-associated endonuclease Cas2|Translation elongation factor EFG, V domain|Virulence-associated protein D / CRISPR associated protein Cas2 GO:0004521|GO:0043571 G3DSA:3.30.70.240|MF_01471|PF09827|PIRSF032582|PTHR34405|PTHR34405:SF1|SSF143430|TIGR01573 MEALZ_RS06605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 MEALZ_RS06620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001555|IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PS00373|PTHR10520|SSF53328 MEALZ_RS06625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF160|SSF51905|SSF55424|TIGR01350 MEALZ_RS06630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006256|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex|E3-binding domain|Single hybrid motif GO:0004742|GO:0006096|GO:0008152|GO:0016746|GO:0045254 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|PTHR23151:SF68|SSF47005|SSF51230|SSF52777|TIGR01348 MEALZ_RS06635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004660|IPR005474|IPR009014|IPR029061|IPR033247 2-oxo-acid dehydrogenase E1 component homodimeric type|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase family|Transketolase, N-terminal GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PIRSF000156|PTHR11624|PTHR11624:SF67|SSF52518|SSF52922|TIGR00759 MEALZ_RS06640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|PTHR11739:SF13|SSF48256|TIGR01798 MEALZ_RS06645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000887|IPR013785|IPR031337|IPR031338 Aldolase-type TIM barrel|KDPG/KHG aldolase|KDPG/KHG aldolase, active site 1|KDPG/KHG aldolase, active site 2 GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF01081|PS00159|PS00160|PTHR30246|PTHR30246:SF0|SSF51569|TIGR01182 MEALZ_RS06650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000581|IPR004786|IPR015928|IPR020558 6-phosphogluconate dehydratase|Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004456|GO:0008152|GO:0009255 PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF9|SSF143975|SSF52016|TIGR01196 MEALZ_RS06655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000031|IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE|Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189|GO:0034023 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|PTHR23046|PTHR23046:SF2|SM01001|SSF52255|TIGR01162 MEALZ_RS06660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003135|IPR005875|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylaminoimidazole carboxylase, ATPase subunit|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004638|GO:0005524|GO:0006189 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01928|PF02222|PTHR11609|PTHR11609:SF5|SSF51246|SSF52440|SSF56059|TIGR01161 MEALZ_RS06665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016545|IPR029055 Nucleophile aminohydrolases, N-terminal|Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 G3DSA:3.60.20.10|PIRSF009120|SSF56235 MEALZ_RS06680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898|IPR022522 Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30433|PTHR30433:SF2 MEALZ_RS06685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF210|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS06690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015259|IPR016040 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal|NAD(P)-binding domain G3DSA:3.40.50.10280|G3DSA:3.40.50.720|PF09176|SSF51735|SSF53223 MEALZ_RS06695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015259|IPR016040 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal|NAD(P)-binding domain G3DSA:3.40.50.10280|G3DSA:3.40.50.720|PF09176|SSF51735|SSF53223 MEALZ_RS06705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002698|IPR024185 5-formyltetrahydrofolate cyclo-ligase|5-formyltetrahydrofolate cyclo-ligase-like domain G3DSA:3.40.50.10420|PF01812|PIRSF006806|PTHR23407|PTHR23407:SF1|SSF100950|TIGR02727 MEALZ_RS06710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000183|IPR005730|IPR009006|IPR022643|IPR022644|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Carboxynorspermidine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PIRSF038941|PR01179|PTHR11482|PTHR11482:SF38|SSF50621|SSF51419 MEALZ_RS06715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002085|IPR002364|IPR011032|IPR013149|IPR013154|IPR016040|IPR020843 Alcohol dehydrogenase superfamily, zinc-type|Alcohol dehydrogenase, C-terminal|Alcohol dehydrogenase, N-terminal|GroES-like|NAD(P)-binding domain|Polyketide synthase, enoylreductase domain|Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.180.10|PF00107|PF08240|PS01162|PTHR11695|PTHR11695:SF294|SM00829|SSF50129|SSF51735 MEALZ_RS06720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006675|IPR013976 HDIG domain|Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SSF109604|TIGR00277 MEALZ_RS06725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001633|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PTHR33121|PTHR33121:SF10|SM00052|SM00267|SSF141868|SSF52172|SSF55073|TIGR00254 MEALZ_RS06730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001264|IPR001460|IPR011813|IPR012338|IPR023346|IPR028166 Beta-lactamase/transpeptidase-like|Bifunctional transglycosylase second domain|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein 1B|Penicillin-binding protein, transpeptidase GO:0008233|GO:0008658|GO:0008955|GO:0009252|GO:0009274|GO:0046677 G3DSA:1.10.3810.10|G3DSA:3.30.2060.10|G3DSA:3.40.710.10|PF00905|PF00912|PF14814|PIRSF002799|PTHR32282|PTHR32282:SF11|SSF53955|SSF56601|TIGR02071|TIGR02074 MEALZ_RS06735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013560 Domain of unknown function DUF1722 PF08349|PTHR30087|PTHR30087:SF0 MEALZ_RS06740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003779|IPR029032 AhpD-like|Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 G3DSA:1.20.1290.10|PF02627|PTHR35446|PTHR35446:SF1|SSF69118 MEALZ_RS06745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009057|IPR018060|IPR018062|IPR020449|IPR032783 AraC-type transcription regulator, ligand-binding domain|DNA binding HTH domain, AraC-type|HTH domain AraC-type, conserved site|Homeodomain-like|Transcription regulator HTH, AraC- type GO:0003677|GO:0003700|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF12833|PF12852|PR00032|PS00041|PTHR11019|PTHR11019:SF77|SM00342|SSF46689 MEALZ_RS06750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753|IPR032816 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|SNARE associated Golgi protein GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PF09335|PR00368|PR00411|PS00076|PTHR22912|PTHR22912:SF29|SSF51905|SSF55424|TIGR01350 MEALZ_RS06755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|PTHR10108|PTHR10108:SF924|SSF53335 MEALZ_RS06760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018641|IPR029044 Nucleotide-diphospho-sugar transferases|Transferase 1, rSAM/selenodomain-associated G3DSA:3.90.550.10|PF09837|PTHR36529|SSF53448|TIGR04282 MEALZ_RS06765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007197|IPR013785|IPR024521|IPR026351 Aldolase-type TIM barrel|Domain of unknown function DUF3641|Radical SAM|Radical SAM/Cys-rich domain protein GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF12345|PF13353|PTHR11228|PTHR11228:SF20|SSF102114|TIGR04167 MEALZ_RS06770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003356|IPR022749|IPR029063 DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PTHR30195|PTHR30195:SF10|SSF53335 MEALZ_RS06775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011664|IPR017034 Abortive infection system protein AbiD/AbiF|Abortive infection system protein AbiD/AbiF-like PF07751|PIRSF034934 MEALZ_RS06785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007711 Toxin HigB-1 PF05015|PTHR40266|PTHR40266:SF2|SSF143011 MEALZ_RS06790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36924|PTHR36924:SF1|SM00530|SSF47413|TIGR02607 MEALZ_RS06810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004852|IPR009056 Cytochrome c-like domain|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF03150|PTHR30600|PTHR30600:SF7|SSF46626 MEALZ_RS06830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007890 CHASE2 PF05226|SM01080 MEALZ_RS06840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726|PTHR22726:SF10 MEALZ_RS06845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR013196 Helix-turn-helix, type 11|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:3.30.1380.20|PF08279|SSF46785 MEALZ_RS06850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001433|IPR007419|IPR008333|IPR017938 BFD-like [2Fe-2S]-binding domain|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF00970|PF04324|PTHR19370|SSF52343|SSF63380 MEALZ_RS06855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011031 Multihaem cytochrome G3DSA:3.90.10.10|PF14537|SSF48695 MEALZ_RS06860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021796 Protein of unknown function DUF3365 PF11845 MEALZ_RS06865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR37844|SSF56300 MEALZ_RS06875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003029|IPR004476|IPR011129|IPR011805|IPR012340|IPR013223|IPR013668|IPR022966|IPR022967 Cold shock protein|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease B, N-terminal OB domain|Ribonuclease II/R, conserved site|Ribonuclease II/ribonuclease R|Ribonuclease R|Ribonuclease R winged-helix domain|S1 domain GO:0003676|GO:0003723|GO:0004518|GO:0004540|GO:0016070 G3DSA:2.40.50.140|MF_01895|PF00575|PF00773|PF08206|PF08461|PS01175|PTHR23355|PTHR23355:SF9|SM00316|SM00357|SM00955|SSF50249|TIGR00358|TIGR02063 MEALZ_RS06880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001537|IPR004441|IPR013123|IPR024915|IPR029026|IPR029028|IPR029064 23S rRNA (guanosine-2-O-)-methyltransferase RlmB|50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|RNA methyltransferase TrmH family|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|MF_01887|PF00588|PF08032|PTHR12029|SM00967|SSF55315|SSF75217|TIGR00186 MEALZ_RS06885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002921|IPR029058 Alpha/Beta hydrolase fold|Fungal lipase-like domain GO:0006629 G3DSA:3.40.50.1820|PF01764|SSF53474 MEALZ_RS06890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006597|IPR011990|IPR029030 Caspase-like domain|Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF08238|PTHR22576|SM00671|SSF52129|SSF81901 MEALZ_RS06895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017734 Type VI secretion system, lipoprotein SciN PF12790|PTHR37625|TIGR03352 MEALZ_RS06900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000189|IPR006597|IPR008258|IPR011990|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Sel1-like repeat|Tetratricopeptide-like helical domain|Transglycosylase SLT domain 1 GO:0000270|GO:0005515|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:1.25.40.10|PF01464|PF08238|PS00922|PTHR21666|SM00671|SSF53955|SSF81901 MEALZ_RS06905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006683|IPR029069 HotDog domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|PTHR11049|SSF54637 MEALZ_RS06910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002205|IPR005742|IPR006691|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase IV, subunit A, Gram-negative|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_00936|PF00521|PF03989|PTHR10169|PTHR10169:SF30|SM00434|SSF101904|SSF56719|TIGR01062 MEALZ_RS06915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0009396|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00767|PTHR10025|SSF51735|SSF53223 MEALZ_RS06920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR014264|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, PEP-CTERM system, putative|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540|TIGR02915 MEALZ_RS06925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358|IPR014265|IPR029016 GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, PEP-CTERM system, putative|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF379|SM00387|SSF47384|SSF55781|SSF55874|TIGR02916 MEALZ_RS06930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR018704|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat-like domain|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF09976|PF13432|PF14559|PTHR23083|SM00028|SSF48452 MEALZ_RS06940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS06945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 G3DSA:3.10.560.10|G3DSA:3.30.1950.10|PF02563|PTHR33619|PTHR33619:SF3 MEALZ_RS06950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003856|IPR014345 Lipopolysaccharide biosynthesis|PEP-CTERM locus polysaccharide chain length determinant GO:0009103|GO:0016020 PF02706|PTHR32309|PTHR32309:SF13|TIGR03007 MEALZ_RS06955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005702|IPR025669|IPR027417 AAA domain|Exopolysaccharide synthesis protein|P-loop containing nucleoside triphosphate hydrolase GO:0045226 G3DSA:3.40.50.300|PF13614|PTHR32309|PTHR32309:SF13|SSF52540|TIGR01007|TIGR03018 MEALZ_RS06960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017467 Conserved hypothetical protein CHP03016, PEP-CTERM TIGR03016 MEALZ_RS06965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002509|IPR011330|IPR014344|IPR022560 Domain of unknown function DUF3473|Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain|PEP-CTERM locus, polysaccharide deactylase GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PF11959|PTHR10587|SSF88713|TIGR03006 MEALZ_RS06970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016181|IPR017469 Acyl-CoA N-acyltransferase|PEP-CTERM system-associated, FemAB-related G3DSA:3.40.630.30|PF13480|SSF55729|TIGR03019 MEALZ_RS06975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017521 Sugar transferase, PEP-CTERM, Stp1 PF13692|PTHR12526|PTHR12526:SF141|SSF53756|TIGR03087 MEALZ_RS06980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002550 Domain of unknown function DUF21 PF01595|PTHR12064|PTHR12064:SF25 MEALZ_RS06985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001221|IPR001433|IPR001709|IPR013112|IPR013130|IPR017938 FAD-binding 8|Ferric reductase transmembrane component-like domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF01794|PF08022|PR00371|PR00410|PTHR19370|SSF52343|SSF63380 MEALZ_RS06990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003777|IPR016040|IPR023753|IPR027051 FAD/NAD(P)-binding domain|NAD(P)-binding domain|XdhC Rossmann domain|XdhC- CoxI GO:0016491|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF02625|PF13478|PTHR30388|SSF51971 MEALZ_RS07005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000674|IPR008274 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF01315|PF02738|PTHR11908|PTHR11908:SF66|SM01008|SSF54665|SSF56003 MEALZ_RS07010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001041|IPR002346|IPR002888|IPR005107|IPR006058|IPR012675|IPR016166|IPR016169 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|CO dehydrogenase flavoprotein, C-terminal|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Molybdopterin dehydrogenase, FAD-binding|[2Fe-2S]-binding GO:0003824|GO:0009055|GO:0016491|GO:0016614|GO:0046872|GO:0050660|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.390.50|G3DSA:3.30.465.10|PF00941|PF01799|PF03450|PS00197|PTHR11908|SM01092|SSF47741|SSF54292|SSF55447|SSF56176 MEALZ_RS07015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006679|IPR006680|IPR011059|IPR026912|IPR032466 Adenine deaminase|Adenine deaminase C-terminal domain|Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0000034|GO:0006146|GO:0016787|GO:0016810 G3DSA:2.30.40.10|MF_01518|PF01979|PF13382|PTHR11113|PTHR11113:SF2|SSF51556|TIGR01178 MEALZ_RS07020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PTHR30566|SSF50182|SSF82689|SSF82861 MEALZ_RS07030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain PF03330|PTHR34183|PTHR34183:SF1|SSF50685|TIGR00413 MEALZ_RS07035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF497|SM00387|SM00448|SSF47384|SSF52172|SSF55874 MEALZ_RS07040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001041|IPR012675|IPR027980 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Protein of unknown function DUF4445 GO:0009055|GO:0051536 G3DSA:3.10.20.30|PF00111|PF14574|SSF54292 MEALZ_RS07045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 G3DSA:3.40.50.280|PF02310|SSF52242 MEALZ_RS07050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 G3DSA:3.20.20.210|PF01208|SSF51726 MEALZ_RS07055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012437 Domain of unknown function DUF1638 PF07796 MEALZ_RS07060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358|IPR011006|IPR029016 CheY-like superfamily|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF382|SM00387|SM00388|SSF47384|SSF52172|SSF55781|SSF55874 MEALZ_RS07065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00086|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS07070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005814|IPR005815|IPR015421|IPR015422|IPR015424 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004015|GO:0008483|GO:0009102|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00834|PF00202|PIRSF000521|PS00600|PTHR11986|PTHR11986:SF8|SSF53383|TIGR00508 MEALZ_RS07075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00228|SSF50156|SSF50494|TIGR02037 MEALZ_RS07080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007272 Sulphur transport domain PF04143|PTHR30574|PTHR30574:SF1 MEALZ_RS07085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR30574|PTHR30574:SF1 MEALZ_RS07090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000572|IPR005066|IPR008335|IPR014756|IPR030835 Eukaryotic molybdopterin oxidoreductase|Immunoglobulin E-set|Moybdenum cofactor oxidoreductase, dimerisation|Oxidoreductase, molybdopterin-binding domain|Sulfite dehydrogenase SoxC GO:0016491|GO:0030151|GO:0042128|GO:0055114 G3DSA:2.60.40.650|G3DSA:3.90.420.10|PF00174|PF03404|PR00407|PTHR19372|PTHR19372:SF2|SSF56524|SSF81296|TIGR04555 MEALZ_RS07095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 MEALZ_RS07100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 MEALZ_RS07105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014826|IPR020568 Formaldehyde-activating enzyme|Ribosomal protein S5 domain 2-type fold GO:0016051|GO:0016840 G3DSA:3.30.230.60|PF08714|SSF54211 MEALZ_RS07110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013785 Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|SSF102114 MEALZ_RS07125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011063|IPR012094|IPR012795|IPR012796|IPR014729|IPR015262|IPR020825 Lysidine-tRNA(Ile) synthetase, C-terminal|Phenylalanyl-tRNA synthetase, B3/B4|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase , substrate-binding domain|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|PF09179|PF11734|PTHR11807|PTHR11807:SF2|SM00977|SSF52402|SSF56037|SSF82829|TIGR02432|TIGR02433 MEALZ_RS07130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|PTHR11550|SSF52317|SSF52540|TIGR00337 MEALZ_RS07135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006218|IPR006269|IPR013785 3-deoxy-8-phosphooctulonate synthase|Aldolase-type TIM barrel|DAHP synthetase I/KDSA GO:0003824|GO:0005737|GO:0008152|GO:0008676|GO:0009058 G3DSA:3.20.20.70|MF_00056|PF00793|PTHR21057|PTHR21057:SF2|SSF51569|TIGR01362 MEALZ_RS07140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|PTHR11902|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 MEALZ_RS07145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007060|IPR023081 Cell division protein FtsB|Septum formation initiator FtsL/DivIC GO:0007049 MF_00599|PF04977|PTHR37485|PTHR37485:SF1 MEALZ_RS07150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001228|IPR018294|IPR029044 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0050518 G3DSA:3.90.550.10|MF_00108|PF01128|PS01295|PTHR32125|PTHR32125:SF4|SSF53448|TIGR00453 MEALZ_RS07155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003526|IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685|GO:0016114 G3DSA:3.30.1330.50|MF_00107|PF02542|PS01350|PTHR32125|SSF69765|TIGR00151 MEALZ_RS07160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001656|IPR020103|IPR020119 Pseudouridine synthase TruD, conserved site|Pseudouridine synthase, TruD|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MF_01082|PF01142|PS01268|PTHR13326|SSF55120|TIGR00094 MEALZ_RS07165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|PTHR30622|PTHR30622:SF4|TIGR00753 MEALZ_RS07170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002625 Smr domain PF01713|PTHR35562|SM00463|SSF160443 MEALZ_RS07175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|PTHR30457|SSF64167|TIGR00087 MEALZ_RS07180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|PTHR11579|SSF53335|TIGR00080 MEALZ_RS07185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032816|IPR032818 DedA family|SNARE associated Golgi protein PF09335|PTHR30353|PTHR30353:SF4 MEALZ_RS07190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|SSF100950|SSF75445|TIGR00021 MEALZ_RS07195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002525|IPR003346 Transposase, IS111A/IS1328/IS1533, N-terminal|Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 PF01548|PF02371|PTHR33055|PTHR33055:SF3 MEALZ_RS07200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PTHR11780|PTHR11780:SF12|SSF52833 MEALZ_RS07205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|PTHR24031|SM00487|SM00490|SSF52540 MEALZ_RS07215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 MEALZ_RS07225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR004602|IPR013815|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|ATP-grasp fold, subdomain 1|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0003824|GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:1.20.1580.10|G3DSA:3.30.1490.20|G3DSA:3.40.50.300|MF_00205|PF00005|PS00211|PTHR32282|PTHR32282:SF2|SSF52540|TIGR00630 MEALZ_RS07230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019251 Domain of unknown function DUF2231, transmembrane PF09990 MEALZ_RS07235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|PTHR22854|PTHR22854:SF6|SSF51366 MEALZ_RS07240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|PTHR10314|PTHR10314:SF3|SSF53686|TIGR00263 MEALZ_RS07245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|PTHR10314|PTHR10314:SF4|SSF51366|TIGR00262 MEALZ_RS07250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000022|IPR000438|IPR029045 Acetyl-CoA carboxylase carboxyl transferase, beta subunit|Carboxyl transferase|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_01395|PF01039|PR01070|PTHR22855|PTHR22855:SF17|SSF52096|TIGR00515 MEALZ_RS07255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001645|IPR004101|IPR013221 Folylpolyglutamate synthetase|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|PIRSF001563|PTHR11136|PTHR11136:SF0|SSF53244|SSF53623|TIGR01499 MEALZ_RS07260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|PTHR38687|PTHR38687:SF1|SSF110997 MEALZ_RS07265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674|PTHR36926|PTHR36926:SF1 MEALZ_RS07270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR005854|IPR029055|IPR029057 Amidophosphoribosyltransferase|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0004044|GO:0009113|GO:0009116 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF00156|PF13522|PIRSF000485|PTHR11907|PTHR11907:SF4|SSF53271|SSF56235|TIGR01134 MEALZ_RS07275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000277|IPR006234|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-succinylhomoserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0030170|GO:0071268 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|PTHR11808|PTHR11808:SF36|SSF53383|TIGR01325 MEALZ_RS07280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|PTHR39332|PTHR39332:SF2|SSF55961 MEALZ_RS07285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011048|IPR011964|IPR015943|IPR019405 Cytochrome cd1-nitrite reductase-like, haem d1 domain|Lactonase, 7-bladed beta propeller|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF10282|PTHR13833|SSF51004|TIGR02276 MEALZ_RS07290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002744|IPR017776 Domain of unknown function DUF59|FeS assembly SUF system protein SufT, putative PF01883|PTHR13696|PTHR13696:SF62|SSF117916|TIGR03406 MEALZ_RS07295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00081|PS00061|PTHR24322|PTHR24322:SF337|SSF51735 MEALZ_RS07300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006346|IPR006439|IPR023198|IPR023214 2-phosphoglycolate phosphatase, prokaryotic|HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0008967|GO:0016787|GO:0046295 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF24|SSF56784|TIGR01449|TIGR01509|TIGR01549 MEALZ_RS07305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010233|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 G3DSA:3.40.50.150|MF_00472|PF13489|PTHR10108|PTHR10108:SF910|SSF53335|TIGR01983 MEALZ_RS07310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006680|IPR011059|IPR023512|IPR032466 Amidohydrolase-related|Deaminase MtaD/DadD|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810|GO:0019239 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01281|PF01979|PTHR11271|PTHR11271:SF7|SSF51338|SSF51556 MEALZ_RS07315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000649|IPR005251|IPR011559|IPR027363 Initiation factor 2B alpha/beta/delta|Initiation factor 2B-related|Methylthioribose-1-phosphate isomerase|Methylthioribose-1-phosphate isomerase-like, N-terminal domain GO:0044237|GO:0044249 G3DSA:1.20.120.420|G3DSA:3.40.50.10470|MF_01678|PF01008|PTHR10233|PTHR10233:SF6|SSF100950|TIGR00512|TIGR00524 MEALZ_RS07320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF07264|PTHR37468 MEALZ_RS07335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR013780|IPR013781|IPR015902|IPR017853|IPR031965 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Starch-binding module 26 GO:0003824|GO:0005975 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF16738|PTHR10357|PTHR10357:SF163|SM00642|SSF51445 MEALZ_RS07340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001804|IPR004429|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|PTHR11835:SF35|SM01329|SSF53659|TIGR00169 MEALZ_RS07345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000891|IPR002034|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF9|SM00917|SSF110921|SSF51569 MEALZ_RS07350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609 MEALZ_RS07355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS07360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR029151 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Periplasmic sensor domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF382|SM00086|SM00091|SM00387|SM00388|SM00448|SSF103190|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS07365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR003043|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478|IPR028281 NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PS00840|PTHR21091|PTHR21091:SF16|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 MEALZ_RS07370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PTHR11780|PTHR11780:SF12|SSF52833 MEALZ_RS07375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR006363|IPR010413|IPR014776|IPR014777 Heme utilization carrier protein HutX-like|Precorrin-3B C17-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.1570.10|PF00590|PF06228|PTHR21091|PTHR21091:SF9|SSF144064|SSF53790|TIGR01466 MEALZ_RS07380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002750 CobE/GbiG C-terminal domain GO:0009236 G3DSA:3.30.420.180|PF01890|PTHR37477|PTHR37477:SF1|SSF159664 MEALZ_RS07385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021744|IPR021745 Cobalamin biosynthesis central region|Cobalamin synthesis G, N-terminal PF11760|PF11761|PTHR37477|PTHR37477:SF1|SSF159672 MEALZ_RS07390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR006364|IPR012382|IPR014777 Precorrin-2 C(20)-methyltransferase|Precorrin-2 C(20)-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168|GO:0008757|GO:0009236|GO:0030788 G3DSA:3.40.1010.10|PF00590|PIRSF036427|PTHR10882|PTHR10882:SF1|SSF53790|TIGR01467 MEALZ_RS07395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR006365|IPR012818|IPR014008|IPR014776|IPR014777|IPR029063 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase|Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase|Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit|S-adenosyl-L-methionine-dependent methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008276|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.150|PF00590|PIRSF036428|PTHR14741|PTHR14741:SF34|SSF53335|SSF53790|TIGR02467|TIGR02469 MEALZ_RS07400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 G3DSA:3.30.2110.10|MF_00787|PF01888|PIRSF026782|PTHR35863|PTHR35863:SF1|SSF111342|TIGR00312 MEALZ_RS07405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 G3DSA:3.40.50.10230|PF02570|PTHR32439|PTHR32439:SF1|SSF63965 MEALZ_RS07410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 G3DSA:3.40.50.1400|PF01903|PTHR33542|PTHR33542:SF2|SSF53800 MEALZ_RS07415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR003043|IPR006362|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0009236|GO:0046026|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|PS00840|PTHR21091|PTHR21091:SF17|SSF53790|TIGR01465 MEALZ_RS07420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00027|PF01656|PF07685|PTHR21343|PTHR21343:SF6|SSF52317|SSF52540|TIGR00379 MEALZ_RS07425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012666 Cobalt transporter subunit CbtA, putative PF09490|TIGR02458 MEALZ_RS07430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR001242|IPR009081|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Condensation domain|Phosphopantetheine binding ACP domain GO:0003824|GO:0008152 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00668|PS00455|PTHR22754|SSF47336|SSF52777|SSF56801 MEALZ_RS07435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS07440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR001242|IPR006162|IPR009081|IPR010071|IPR020806|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain|Polyketide synthase, phosphopantetheine-binding domain GO:0003824|GO:0008152|GO:0031177 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF13193|PF13745|PS00012|PS00455|PTHR24095|PTHR24095:SF173|SM00823|SSF47336|SSF52777|SSF56801|TIGR01733 MEALZ_RS07445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR001242|IPR009081|IPR010071|IPR010080|IPR013120|IPR016040|IPR025110 AMP-binding enzyme C-terminal domain|AMP-dependent synthetase/ligase|Amino acid adenylation domain|Condensation domain|Male sterility, NAD-binding|NAD(P)-binding domain|Phosphopantetheine binding ACP domain|Thioester reductase-like domain GO:0003824|GO:0008152 G3DSA:1.10.1200.10|G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.720|G3DSA:3.40.50.980|PF00501|PF00550|PF00668|PF07993|PF13193|PTHR24095|PTHR24095:SF173|SSF47336|SSF51735|SSF52777|SSF56801|TIGR01733|TIGR01746 MEALZ_RS07450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR011662|IPR012910 Secretin/TonB, short N-terminal domain|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07660|PF07715|PTHR32552|SM00965|SSF56935 MEALZ_RS07455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005625 PepSY-associated TM protein PF03929|PTHR34219 MEALZ_RS07460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000863|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Sulfotransferase domain GO:0008146 G3DSA:3.40.50.300|PF00685|PTHR10605|PTHR10605:SF33|SSF52540 MEALZ_RS07465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:2.60.120.650|PF13621|PTHR12461|SSF51197 MEALZ_RS07470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|PTHR12215|SSF56214 MEALZ_RS07475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025587 Domain of unknown function DUF4351 PF14261 MEALZ_RS07485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|SSF46785 MEALZ_RS07490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005153 MbtH-like protein G3DSA:3.90.820.10|PF03621|PTHR38444|PTHR38444:SF1|SM00923|SSF160582 MEALZ_RS07495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 MEALZ_RS07500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005898|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|Cyclic peptide transporter|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0015197|GO:0015833|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24220|PTHR24220:SF425|SM00382|SSF52540|SSF90123|TIGR01194 MEALZ_RS07505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002692|IPR014395|IPR023343|IPR029055 Nucleophile aminohydrolases, N-terminal|Penicillin acylase|Penicillin amidase type, domain1|Penicillin/cephalosporin acylase GO:0016787|GO:0016811|GO:0017000 G3DSA:1.10.439.10|G3DSA:2.30.120.10|G3DSA:3.60.20.10|PF01804|PIRSF001227|PTHR34218|PTHR34218:SF2|SSF56235 MEALZ_RS07510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006860|IPR012373|IPR032508|IPR032623 Fe(2+)-dicitrate sensor, transmembrane component|FecR protein|FecR, N-terminal|Protein FecR, C-terminal PF04773|PF16220|PF16344|PIRSF018266|PTHR30273|PTHR30273:SF2 MEALZ_RS07515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005625 PepSY-associated TM protein PF03929 MEALZ_RS07520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF3|SSF56954|TIGR01845 MEALZ_RS07525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 MEALZ_RS07530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF33|SSF82693|SSF82714|SSF82866 MEALZ_RS07535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012351 Four-helical cytokine, core G3DSA:1.20.1250.10 MEALZ_RS07540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003538|IPR006260 Gram-negative bacterial TonB protein|TonB, C-terminal GO:0006810|GO:0015343|GO:0015891|GO:0030288|GO:0031992 G3DSA:3.30.1150.10|PF03544|PR01374|PTHR33446|PTHR33446:SF2|SSF74653|TIGR01352 MEALZ_RS07545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625 MEALZ_RS07550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 MEALZ_RS07555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23518|PTHR23518:SF2|SSF103473 MEALZ_RS07560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006675|IPR013976 HDIG domain|Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF2|SSF109604|TIGR00277 MEALZ_RS07565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002052|IPR004556|IPR007848|IPR017127|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Ribosomal protein L3-specific, glutamine-N5-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0005622|GO:0006479|GO:0008168|GO:0008276|GO:0009007|GO:0032259|GO:0032775 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02125|PF05175|PIRSF037167|PS00092|PTHR18895|PTHR18895:SF66|SSF53335|TIGR00536|TIGR03533 MEALZ_RS07570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|PS00789|PTHR21085|SSF103263|TIGR00033 MEALZ_RS07575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR024989|IPR026032 Major facilitator superfamily associated domain|Major facilitator superfamily domain|Probable 3-phenylpropionic acid transporter G3DSA:1.20.1250.20|PF12832|PIRSF004925|PTHR23522|PTHR23522:SF3|SSF103473 MEALZ_RS07580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF0 MEALZ_RS07585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF5 MEALZ_RS07590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003758|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 G3DSA:3.40.50.300|MF_00409|PF02606|PTHR30160|PTHR30160:SF13|SSF52540|TIGR00682 MEALZ_RS07595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005651 Uncharacterised protein family UPF0434/Trm112 G3DSA:2.20.25.10|MF_01187|PF03966|PTHR33505|SSF158997 MEALZ_RS07600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003329|IPR004528|IPR029044 3-deoxy-D-manno-octulosonate cytidylyltransferase|Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases GO:0005737|GO:0008690 G3DSA:3.90.550.10|MF_00057|PF02348|PTHR21485|PTHR21485:SF4|SSF53448|TIGR00466 MEALZ_RS07605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF302|SSF53383 MEALZ_RS07610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001342|IPR002912|IPR005106|IPR016040|IPR016204|IPR019811 ACT domain|Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|Homoserine dehydrogenase, conserved site|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0008152|GO:0016491|GO:0016597|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF01842|PF03447|PIRSF000098|PS01042|PTHR21499|PTHR21499:SF2|SSF51735|SSF55021|SSF55347 MEALZ_RS07615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000634|IPR001926|IPR004450|IPR026260 Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine synthase, bacterial/archaeal|Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004795|GO:0006520|GO:0009088|GO:0030170 G3DSA:3.40.50.1100|PF00291|PIRSF038945|PS00165|PTHR10314|PTHR10314:SF5|SSF53686|TIGR00260 MEALZ_RS07620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 PF01368|PF02272|PTHR30255|PTHR30255:SF2|SSF64182|TIGR00644 MEALZ_RS07625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF13487|SSF109604 MEALZ_RS07630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PS01050|PTHR12592|PTHR12592:SF0|SSF53613|SSF64153|TIGR00196|TIGR00197 MEALZ_RS07635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|PTHR33540|PTHR33540:SF2|SSF52540|TIGR00150 MEALZ_RS07640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002508|IPR018392|IPR021731 AMIN domain|Cell wall hydrolase/autolysin, catalytic|LysM domain GO:0008745|GO:0009253 G3DSA:3.10.350.10|G3DSA:3.40.630.40|PF01476|PF01520|PF11741|PTHR30404|PTHR30404:SF1|SM00257|SM00646|SSF53187|SSF54106 MEALZ_RS07650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|PTHR10073|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 MEALZ_RS07655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|PTHR11088|SSF52540|TIGR00174 MEALZ_RS07660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019262 Domain of unknown function DUF2272 PF10030 MEALZ_RS07665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR016478|IPR019991|IPR023179|IPR027417 GTP binding domain|GTP-binding protein, orthogonal bundle domain|GTP-binding protein, ribosome biogenesis|GTPase, MTG1|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:1.10.1580.10|G3DSA:3.40.50.300|PF01926|PIRSF006230|PR00326|PTHR11089|SSF52540|TIGR03596 MEALZ_RS07675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR001498|IPR009022|IPR015269|IPR020568|IPR023582 Elongation factor G, III-V domain|Impact family|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Translation elongation factor EFG, V domain|Uncharacterised domain UPF0029, Impact, C-terminal G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|PTHR16301|PTHR16301:SF0|SSF54211|SSF54980 MEALZ_RS07680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|SSF143100 MEALZ_RS07685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015590|IPR016160|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PS00070|PTHR11699|PTHR11699:SF28|SSF53720 MEALZ_RS07695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004099|IPR006258|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PTHR22912|PTHR22912:SF131|SSF51905|SSF55424|TIGR01350 MEALZ_RS07700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000089|IPR001078|IPR003016|IPR004167|IPR006255|IPR011053|IPR023213 2-oxo acid dehydrogenase, lipoyl-binding site|2-oxoacid dehydrogenase acyltransferase, catalytic domain|Biotin/lipoyl attachment|Chloramphenicol acetyltransferase-like domain|Dihydrolipoamide succinyltransferase|E3-binding domain|Single hybrid motif GO:0004149|GO:0006099|GO:0008152|GO:0016746|GO:0045252 G3DSA:2.40.50.100|G3DSA:3.30.559.10|G3DSA:4.10.320.10|PF00198|PF00364|PF02817|PS00189|PTHR23151|PTHR23151:SF47|SSF47005|SSF51230|SSF52777|TIGR01347 MEALZ_RS07705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001017|IPR005475|IPR011603|IPR029061|IPR031717|IPR032106 2-oxoglutarate dehydrogenase E1 component|2-oxoglutarate dehydrogenase E1 component, N-terminal domain|Dehydrogenase, E1 component|Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal|Thiamin diphosphate-binding fold|Transketolase-like, pyrimidine-binding domain GO:0004591|GO:0006099|GO:0008152|GO:0016624|GO:0030976|GO:0055114 G3DSA:3.40.50.970|PF00676|PF02779|PF16078|PF16870|PIRSF000157|PTHR23152|PTHR23152:SF4|SM00861|SSF52518|TIGR00239 MEALZ_RS07710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022606 Protein of unknown function DUF2914 PF11141 MEALZ_RS07715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001801|IPR027444 Histone-like protein H-NS|Histone-like protein H-NS, C-terminal domain GO:0003677|GO:0005622|GO:0006355 G3DSA:4.10.430.10|PF00816|SM00528|SSF81273 MEALZ_RS07720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|PTHR10657|PTHR10657:SF12|SM00450|SSF52821 MEALZ_RS07725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001453|IPR005110|IPR005111|IPR008284 MoaB/Mog domain|MoeA, C-terminal, domain IV|MoeA, N-terminal and linker domain|Molybdenum cofactor biosynthesis, conserved site GO:0006777|GO:0032324 G3DSA:2.170.190.11|G3DSA:2.40.340.10|G3DSA:3.40.980.10|G3DSA:3.90.105.10|PF00994|PF03453|PF03454|PS01079|PTHR10192|SM00852|SSF53218|SSF63867|SSF63882|TIGR00177 MEALZ_RS07730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004435|IPR027417 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525|GO:0006777 G3DSA:3.40.50.300|PF03205|PTHR40072|SSF52540|TIGR00176 MEALZ_RS07735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|PF00226|PTHR12763|PTHR12763:SF17|SM00271|SSF46565 MEALZ_RS07740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011055|IPR016047|IPR018392 Duplicated hybrid motif|LysM domain|Peptidase M23 G3DSA:2.70.70.10|G3DSA:3.10.350.10|PF01476|PF01551|PTHR21666|SM00257|SSF51261 MEALZ_RS07745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR012761|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor RpoS|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00959|PF00140|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|PTHR30603:SF15|SSF88659|SSF88946|TIGR02394|TIGR02937 MEALZ_RS07750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF12|SSF56317 MEALZ_RS07755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 MEALZ_RS07760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006976 VanZ-like PF04892 MEALZ_RS07765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007402|IPR009078|IPR011197 Ferritin-like superfamily|Protein of unknown function DUF455|Uncharacterised conserved protein UCP012318 PF04305|PIRSF012318|PTHR21496|PTHR21496:SF6|SSF47240 MEALZ_RS07770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010266 NnrS PF05940 MEALZ_RS07790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006685|IPR010920|IPR011014|IPR011066|IPR024393|IPR025692 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, porin domain|Mechanosensitive ion channel MscS, transmembrane-2|Mechanosensitive ion channel inner membrane domain 1 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF12794|PF12795|PTHR30347|PTHR30347:SF0|SSF50182|SSF82689|SSF82861 MEALZ_RS07795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004681|IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit|TRAP transporter permease protein GO:0016021 PF06808|PIRSF006066|PTHR33362|PTHR33362:SF6|TIGR00786 MEALZ_RS07800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component PF04290|PTHR35011 MEALZ_RS07805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PTHR33376 MEALZ_RS07810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR031823 TRAP transporter T-component|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF16811 MEALZ_RS07815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|SSF54637 MEALZ_RS07820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001227|IPR009081|IPR013968|IPR014030|IPR014031|IPR014043|IPR016035|IPR016036|IPR016039|IPR016040|IPR020801|IPR020807|IPR020841|IPR032821 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Ketoacyl-synthetase, C-terminal extension|Malonyl-CoA ACP transacylase, ACP-binding|NAD(P)-binding domain|Phosphopantetheine binding ACP domain|Polyketide synthase, acyl transferase domain|Polyketide synthase, beta-ketoacyl synthase domain|Polyketide synthase, dehydratase domain|Polyketide synthase, ketoreductase domain|Thiolase-like GO:0003824|GO:0008152|GO:0016740 G3DSA:1.10.1200.10|G3DSA:3.30.70.250|G3DSA:3.40.366.10|G3DSA:3.40.47.10|G3DSA:3.40.50.720|PF00109|PF00698|PF02801|PF08659|PF14765|PF16197|PTHR11712|PTHR11712:SF234|SM00822|SM00825|SM00827|SSF47336|SSF51735|SSF52151|SSF53901|SSF55048 MEALZ_RS07825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 PF03116 MEALZ_RS07830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011519|IPR027039 ASPIC/UnbV|Cartilage acidic protein 1 G3DSA:2.130.10.130|PF07593|PF13517|PTHR16026|PTHR16026:SF0|SSF69318 MEALZ_RS07835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012964 Protein of unknown function DUF1702 PF08012 MEALZ_RS07840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013424 PEP-CTERM protein-sorting domain PF07589|TIGR02595 MEALZ_RS07845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009057 Homeodomain-like GO:0003677 G3DSA:1.10.10.60|PF13384|SSF46689 MEALZ_RS07850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004869 Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|SSF82866 MEALZ_RS07855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010663|IPR010979|IPR012319|IPR015886|IPR020629 DNA glycosylase/AP lyase, H2TH DNA-binding|Formamidopyrimidine-DNA glycosylase|Formamidopyrimidine-DNA glycosylase, catalytic domain|Ribosomal protein S13-like, H2TH|Zinc finger, FPG/IleRS-type GO:0003676|GO:0003684|GO:0003906|GO:0006281|GO:0006284|GO:0006289|GO:0008270|GO:0008534|GO:0016799 G3DSA:1.10.8.50|G3DSA:3.20.190.10|MF_00103|PF01149|PF06827|PF06831|PTHR22993|PTHR22993:SF15|SM00898|SM01232|SSF46946|SSF57716|SSF81624|TIGR00577 MEALZ_RS07860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019196|IPR029062 ABC-type uncharacterised transport system|Class I glutamine amidotransferase-like PF09822|SSF52317 MEALZ_RS07865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032688 ABC-2 family transporter protein GO:0006810 PF12679|PTHR30294 MEALZ_RS07870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001898|IPR031312 Sodium/sulphate symporter|Sodium/sulphate symporter, conserved site GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PS01271|PTHR10283|PTHR10283:SF82|TIGR00785 MEALZ_RS07875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003817|IPR033177|IPR033178 Phosphatidylserine decarboxylase|Phosphatidylserine decarboxylase, prokaryotic type 1|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00662|PF02666|PTHR10067|TIGR00163 MEALZ_RS07880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006135|IPR029025 Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0016020 G3DSA:3.40.1690.10|PF01312|PTHR30531|SSF160544 MEALZ_RS07885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|PTHR34354|PTHR34354:SF1|SSF55620|TIGR03139 MEALZ_RS07890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003395|IPR010935|IPR011890|IPR024704|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal|SMCs flexible hinge|Structural maintenance of chromosomes protein|Structural maintenance of chromosomes protein, prokaryotic GO:0005515|GO:0005524|GO:0005694|GO:0007062|GO:0030261|GO:0051276 G3DSA:3.40.50.300|MF_01894|PF02463|PF06470|PIRSF005719|PTHR18937|PTHR18937:SF261|SSF52540|SSF57997|SSF75553|TIGR02168 MEALZ_RS07895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 G3DSA:3.30.1400.10|PD035754|PF04354|PTHR38685|PTHR38685:SF1|SM00771|SSF64383 MEALZ_RS07900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR031877 Metal-binding protein SmbP GO:0046872 PF16785 MEALZ_RS07905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003738 SOS response associated peptidase (SRAP) G3DSA:3.90.1680.10|PF02586|PTHR13604|SSF143081 MEALZ_RS07910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001926|IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|PIRSF006278|PTHR10314|PTHR10314:SF79|SSF53686 MEALZ_RS07915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|PTHR10108|PTHR10108:SF721|SSF53335 MEALZ_RS07920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 MEALZ_RS07930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00792|PS00793|PTHR20941|PTHR20941:SF1|SSF51717|TIGR01496 MEALZ_RS07935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003382 Flavoprotein GO:0003824 G3DSA:3.40.50.1950|PF02441|PTHR14359|PTHR14359:SF18|SSF52507 MEALZ_RS07940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000489|IPR011005 Dihydropteroate synthase-like|Pterin-binding domain GO:0042558|GO:0044237 G3DSA:3.20.20.20|PTHR20941|PTHR20941:SF11|SSF51717 MEALZ_RS07945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007386|IPR012349 FMN-binding split barrel|Protein of unknown function DUF447 GO:0010181|GO:0016491|GO:0055114 G3DSA:1.20.58.290|G3DSA:2.30.110.10|PF04289|SSF50475 MEALZ_RS07950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase PF04476|PIRSF015957 MEALZ_RS07960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005995|IPR006124|IPR011258|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|BPG-independent PGAM, N-terminal|Metalloenzyme|Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0003824|GO:0004619|GO:0005737|GO:0006007|GO:0008152|GO:0030145|GO:0046872 G3DSA:3.40.1450.10|G3DSA:3.40.720.10|PF01676|PF06415|PIRSF001492|PTHR31637|PTHR31637:SF0|SSF53649|SSF64158|TIGR01307 MEALZ_RS07965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001357|IPR001679|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840 BRCT domain|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.40.50.10190|MF_01588|PF00533|PF01653|PF03120|PF14520|PTHR23389|PTHR23389:SF9|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091 MEALZ_RS07970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|PTHR26402:SF495|SM00448|SM00471|SSF109604|SSF52172 MEALZ_RS07975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR013656 PAC motif|PAS domain|PAS fold-4 G3DSA:3.30.450.20|PF08448|PF13188|PTHR24423|SM00086|SM00091|SSF55785|TIGR00229 MEALZ_RS07985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF08447|PF13426|PR00344|PTHR24423|PTHR24423:SF382|SM00073|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS07990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF497|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 MEALZ_RS07995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF160|SM00382|SSF52540 MEALZ_RS08000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007451 Uncharacterised protein family UPF0274 G3DSA:1.10.3890.10|MF_00695|PD037115|PF04356|PTHR38100|PTHR38100:SF1|SSF101322 MEALZ_RS08005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763 Rhodanese-like domain G3DSA:3.40.250.10|PF00581|SM00450|SSF52821 MEALZ_RS08010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001633|IPR013976|IPR014408 EAL domain|Metal-dependent hydrolase HDOD|Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing G3DSA:1.10.3150.10|G3DSA:3.20.20.450|PF00563|PF08668|PIRSF003180|PTHR33525|PTHR33525:SF4|SM00052|SSF109604|SSF141868 MEALZ_RS08015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|PR00942|SSF55008 MEALZ_RS08020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00942|PR00943|PS00154|PS01047|PTHR24093|PTHR24093:SF319|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 MEALZ_RS08030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR029150|IPR029787 Double Cache domain 3|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF14827|PTHR33121|PTHR33121:SF10|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00254 MEALZ_RS08040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR007435|IPR029016|IPR029787 GAF domain-like|GGDEF domain|Nucleotide cyclase|Protein of unknown function DUF484 G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00990|PF04340|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|SSF55781|TIGR00254 MEALZ_RS08045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR004100|IPR027417 ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015992|GO:0046034 G3DSA:3.40.50.300|PF00006|PF02874|PTHR15184|PTHR15184:SF11|SSF52540 MEALZ_RS08050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002699 ATPase, V1 complex, subunit D GO:0042626 PF01813|PTHR11671|PTHR11671:SF2 MEALZ_RS08060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 G3DSA:1.20.120.610|PF00137|SSF81333 MEALZ_RS08070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024492 Protein of unknown function DUF2764 PF10962 MEALZ_RS08075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR004100|IPR020003|IPR022878|IPR027417|IPR031686 ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|ATPsynthase alpha/beta subunit, N-terminal extension|P-loop containing nucleoside triphosphate hydrolase|V-type ATP synthase catalytic alpha chain GO:0005524|GO:0015992|GO:0046034 G3DSA:3.40.50.300|MF_00309|PF00006|PF02874|PF16886|PS00152|PTHR15184|PTHR15184:SF7|SSF52540 MEALZ_RS08080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003660|IPR004089|IPR021796 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain|Protein of unknown function DUF3365 GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PF11845|PTHR32089|PTHR32089:SF34|SM00283|SM00304|SSF58104 MEALZ_RS08085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017867|IPR023485 Phosphotyrosine protein phosphatase I superfamily|Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 G3DSA:3.40.50.270|PF01451|PR00719|PTHR11717|PTHR11717:SF7|SM00226|SSF52788 MEALZ_RS08090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002925|IPR029058 Alpha/Beta hydrolase fold|Dienelactone hydrolase GO:0016787 G3DSA:3.40.50.1820|PF01738|PTHR22946|SSF53474 MEALZ_RS08095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000529|IPR014717|IPR020814|IPR020815 Ribosomal protein S6|Ribosomal protein S6, conserved site|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|PS01048|PTHR21011|PTHR21011:SF1|SSF54995|TIGR00166 MEALZ_RS08100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001648|IPR018275 Ribosomal protein S18|Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|PS00057|PTHR13479|SSF46911|TIGR00165 MEALZ_RS08105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018710 Protein of unknown function DUF2232 PF09991 MEALZ_RS08110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000244|IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9|Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|PS00651|PTHR21368|SSF55653|SSF55658|TIGR00158 MEALZ_RS08120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 MEALZ_RS08130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001117|IPR002355|IPR008972|IPR011706|IPR011707|IPR033138 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Multicopper oxidases, conserved site GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00079|PS00080|PTHR11709|PTHR11709:SF33|SSF49503 MEALZ_RS08140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel GO:0019867 G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|TIGR01414 MEALZ_RS08145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|SSF56801 MEALZ_RS08150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR004089|IPR012130|IPR013767 Methyl-accepting chemotaxis protein (MCP) signalling domain|PAS domain|PAS fold|Photoactive yellow-protein GO:0004871|GO:0006355|GO:0007165|GO:0007602|GO:0009881|GO:0016020|GO:0018298 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF00989|PTHR32089|SM00283|SSF55785|SSF58104|TIGR02373 MEALZ_RS08155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001792|IPR007024 Acylphosphatase-like domain|BLUF domain GO:0009882|GO:0071949 PF04940|SM01034|SSF54975 MEALZ_RS08160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004017|IPR012257|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Cysteine-rich domain|Glycolate oxidase, iron-sulphur subunit G3DSA:1.10.1060.10|PF02754|PF12838|PIRSF000139|PS00198|PTHR32479|PTHR32479:SF2|SSF54862 MEALZ_RS08165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006094|IPR016164|IPR016166|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.465.10|PF01565|PTHR11748|PTHR11748:SF1|SSF55103|SSF56176 MEALZ_RS08170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004113|IPR006094|IPR016164|IPR016166|IPR016167|IPR016169|IPR016171 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal|Vanillyl-alcohol oxidase, C-terminal subdomain 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:1.10.45.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02913|PTHR11748|PTHR11748:SF78|SSF55103|SSF56176 MEALZ_RS08175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 MEALZ_RS08180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020948 Phosphate-starvation-induced PsiE-like PF06146 MEALZ_RS08185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF13488|PR01021|PTHR30128|SSF103088 MEALZ_RS08190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004869|IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN|Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|PTHR33406:SF2|SSF82866|TIGR03480 MEALZ_RS08195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005240|IPR016064 NAD kinase/diacylglycerol kinase-like domain|Protein of unknown function DUF389 PF04087|PTHR20992|SSF111331 MEALZ_RS08200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006685|IPR010920 LSM domain|Mechanosensitive ion channel MscS GO:0016020|GO:0055085 G3DSA:2.30.30.60|PF00924|PTHR30566|PTHR30566:SF11|SSF50182 MEALZ_RS08210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:1.20.120.20 MEALZ_RS08215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001736|IPR015414|IPR025202|IPR032816 Phospholipase D-like domain|Phospholipase D/Transphosphatidylase|SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0003824|GO:0016021 G3DSA:3.30.870.10|PF00614|PF09335|PF13091|PTHR12677|SM00155|SSF56024 MEALZ_RS08220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005135|IPR027317 Endonuclease/exonuclease/phosphatase|PGAP2-interacting protein G3DSA:3.60.10.10|PF03372|PTHR14859|PTHR14859:SF0|SSF56219 MEALZ_RS08225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006685|IPR007055|IPR010920|IPR011066 BON domain|LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|PF04972|PTHR30221|PTHR30221:SF1|SSF50182|SSF82689 MEALZ_RS08230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004888|IPR008928|IPR031335 Glycoside hydrolase family 63|Glycosyl hydrolase family 63, C-terminal|Six-hairpin glycosidase-like GO:0003824|GO:0004573|GO:0009311 PF03200|PTHR10412|PTHR10412:SF10|SSF48208 MEALZ_RS08235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR013781|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 G3DSA:3.20.20.80|PF00128|PTHR10357|PTHR10357:SF155|SM00642|SSF51445 MEALZ_RS08240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006001|IPR027417|IPR031322 Carbohydrate kinase, thermoresistant glucokinase|P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/gluconokinase GO:0005975|GO:0016301 G3DSA:3.40.50.300|PF01202|PTHR11603|SSF52540|TIGR01313 MEALZ_RS08245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011042|IPR013658 SMP-30/Gluconolactonase/LRE-like region|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF08450|PTHR10907|PTHR10907:SF47|SSF63829 MEALZ_RS08260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143011 MEALZ_RS08270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011649|IPR012336 KaiB domain|Thioredoxin-like fold GO:0048511 G3DSA:3.40.30.10|PF07689|PTHR41709|PTHR41709:SF2|SM01248|SSF52833 MEALZ_RS08275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR013655|IPR013656|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3|PAS fold-4 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00990|PF08447|PF08448|PF13185|PTHR33121|PTHR33121:SF13|SM00052|SM00065|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 MEALZ_RS08280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|SSF51735 MEALZ_RS08290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF316|SM00448|SM00862|SSF46894|SSF52172 MEALZ_RS08295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003660|IPR003661|IPR004358|IPR013727 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF08521|PR00344|PTHR24423|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 MEALZ_RS08300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000121|IPR002192|IPR008279|IPR010121|IPR013815|IPR013816|IPR015813|IPR018274 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate, phosphate dikinase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0016301|GO:0016310|GO:0016772|GO:0050242 G3DSA:1.10.189.10|G3DSA:1.20.80.30|G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000853|PS00370|PTHR22931|PTHR22931:SF9|SSF51621|SSF52009|SSF56059|TIGR01828 MEALZ_RS08305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000286|IPR023801 Histone deacetylase domain|Histone deacetylase superfamily G3DSA:3.40.800.20|PF00850|PR01270|PTHR10625|PTHR10625:SF104|SSF52768 MEALZ_RS08310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021109 Aspartic peptidase domain G3DSA:2.40.70.10|PF05618|PTHR38037|SSF50630 MEALZ_RS08315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004588|IPR011005|IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Dihydropteroate synthase-like GO:0005506|GO:0008299|GO:0016114|GO:0044237|GO:0046429|GO:0055114 MF_00159|PF04551|PIRSF004640|PTHR30454|SSF51717|TIGR00612 MEALZ_RS08320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR37844|SSF56300 MEALZ_RS08325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002543|IPR003593|IPR011991|IPR018541|IPR025199|IPR027417 AAA+ ATPase domain|DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:3.40.50.300|PF01580|PF09397|PF13491|PTHR22683|PTHR22683:SF41|SM00382|SM00843|SSF46785|SSF52540 MEALZ_RS08335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004453|IPR009051|IPR013542|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Domain of unknown function DUF1730|Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491|GO:0051536 G3DSA:3.30.70.20|MF_00916|PF08331|PF13484|PS00198|PTHR30002|PTHR30002:SF4|SSF46548|TIGR00276 MEALZ_RS08345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS08355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SSF109604 MEALZ_RS08360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120 MEALZ_RS08365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR11614|PTHR11614:SF87|SSF53474 MEALZ_RS08370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|PS01279|PTHR11579|SSF53335|TIGR00080 MEALZ_RS08375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR029063 Major facilitator superfamily domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01564|SSF103473|SSF53335 MEALZ_RS08380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006638|IPR007197|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PTHR11228|PTHR11228:SF26|SM00729|SSF102114 MEALZ_RS08390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PF00209|PR00176|PTHR11616|PTHR11616:SF169|SSF161070 MEALZ_RS08395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002109|IPR011767|IPR011900|IPR012336|IPR014025 Glutaredoxin|Glutaredoxin active site|Glutaredoxin subgroup|Glutaredoxin, GrxC|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PR00160|PS00195|PTHR10168|SSF52833|TIGR02181 MEALZ_RS08400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001303 Class II aldolase/adducin N-terminal G3DSA:3.40.225.10|PF00596|SSF53639 MEALZ_RS08405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002024|IPR008331|IPR009078|IPR012347 Bacterioferritin|Ferritin-like superfamily|Ferritin-related|Ferritin/DPS protein domain GO:0006826|GO:0006879|GO:0008199 G3DSA:1.20.1260.10|PF00210|PIRSF002560|PR00601|PS00549|PTHR30295|PTHR30295:SF9|SSF47240|TIGR00754 MEALZ_RS08415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002872|IPR005933|IPR015590|IPR016160|IPR016161|IPR016162|IPR016163|IPR024082|IPR024089|IPR024090|IPR025703|IPR029041 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde dehydrogenase, cysteine active site|Aldehyde/histidinol dehydrogenase|Bifunctional protein PutA|Delta-1-pyrroline-5-carboxylate dehydrogenase 3|FAD-linked oxidoreductase-like|Proline dehydrogenase PutA, domain I|Proline dehydrogenase PutA, domain I/II|Proline dehydrogenase PutA, domain II|Proline dehydrogenase domain GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0006561|GO:0008152|GO:0010133|GO:0016491|GO:0016620|GO:0055114 G3DSA:1.10.2060.10|G3DSA:1.20.5.550|G3DSA:3.20.20.220|G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PF01619|PF14850|PIRSF000197|PS00070|PTHR11699|PTHR11699:SF18|SSF51730|SSF53720|SSF81935|TIGR01238 MEALZ_RS08420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR022742|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PR00111|PTHR11614|SSF53474 MEALZ_RS08425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007815|IPR014622 Erythromycin esterase|Uncharacterised conserved protein UCP036794, erythromycin esterase-type GO:0046677 G3DSA:3.30.1870.10|G3DSA:3.40.1660.10|PF05139|PIRSF036794|PTHR31299|PTHR31299:SF0|SSF159501 MEALZ_RS08440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005839|IPR006467|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|MiaB-like tRNA modifying enzyme|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0009451|GO:0016740|GO:0043412|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF45|SM00729|SSF102114|TIGR00089|TIGR01579 MEALZ_RS08445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011415|IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain|Predicted bifunctional spore maturation protein, fused SpmA/SpmB PF07670|PIRSF036542|PTHR35793|PTHR35793:SF2 MEALZ_RS08450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.20|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS08455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 MEALZ_RS08475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009722|IPR011042 SdiA-regulated|Six-bladed beta-propeller, TolB-like G3DSA:2.120.10.30|PF06977|SSF50956 MEALZ_RS08480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|PF01339|PTHR24421|PTHR24421:SF16|SSF52738 MEALZ_RS08485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS08490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PR00344|PTHR24423|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 MEALZ_RS08500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000709|IPR017777|IPR028082 ABC transporter, urea, substrate-binding, UrtA|Leu/Ile/Val-binding protein|Periplasmic binding protein-like I GO:0006865 G3DSA:3.40.50.2300|PF13433|PR00337|PTHR30483|PTHR30483:SF8|SSF53822|TIGR03407 MEALZ_RS08505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001851|IPR017779 ABC transporter, permease|ABC transporter, urea permease protein UrtB, bacterial-type GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF349|TIGR03409 MEALZ_RS08510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001851|IPR017778 ABC transporter, permease|ABC transporter, urea, permease protein, UrtC GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF4|TIGR03408 MEALZ_RS08515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017781|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtD|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF366|SM00382|SSF52540|TIGR03411 MEALZ_RS08520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017780|IPR027417 AAA+ ATPase domain|ABC transporter, urea, ATP-binding protein, UrtE|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF404|SM00382|SSF52540|TIGR03410 MEALZ_RS08525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004304 Acetamidase/Formamidase GO:0016811 G3DSA:2.60.120.580|PF03069|PTHR31891|PTHR31891:SF1|SSF141130 MEALZ_RS08530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PF09723|SM00834|TIGR02605 MEALZ_RS08540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143100 MEALZ_RS08545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|PTHR34873|PTHR34873:SF1|SSF54786 MEALZ_RS08570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009387 Toxin HigB-2 PIRSF039032 MEALZ_RS08575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010982|IPR032758 Antitoxin MqsA/igA-2|Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF15731|PTHR36511|PTHR36511:SF3|SSF47413 MEALZ_RS08580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007159 SpoVT-AbrB domain GO:0003677 G3DSA:2.10.260.10|SM00966|SSF89447 MEALZ_RS08585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|PTHR33988|PTHR33988:SF2|SSF50118 MEALZ_RS08590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|PTHR36449|SSF55729 MEALZ_RS08595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR013321|IPR014795 Arc-type ribbon-helix-helix|Ribbon-helix-helix|Vibrio phage ICP1, Orf50 GO:0006355 G3DSA:1.10.1220.10|G3DSA:1.20.890.30|PF08681|PTHR35401|PTHR35401:SF2|SSF47598 MEALZ_RS08605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 MEALZ_RS08610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|PTHR30483|PTHR30483:SF8|SSF53822 MEALZ_RS08620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR028082 Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13433|PTHR30483|PTHR30483:SF8|SSF53822 MEALZ_RS08625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001851|IPR016024|IPR017779 ABC transporter, permease|ABC transporter, urea permease protein UrtB, bacterial-type|Armadillo-type fold GO:0005215|GO:0005488|GO:0006810|GO:0016020 PF02653|PTHR11795|PTHR11795:SF349|SSF48371|TIGR03409 MEALZ_RS08630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001851|IPR017778 ABC transporter, permease|ABC transporter, urea, permease protein, UrtC GO:0005215|GO:0006810|GO:0016020 PF02653|PTHR30482|PTHR30482:SF4|TIGR03408 MEALZ_RS08635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR017781|IPR027417|IPR032823 ABC transporter, urea, ATP-binding protein, UrtD|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|PTHR24220|PTHR24220:SF366|SSF52540|TIGR03411 MEALZ_RS08640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF404|SM00382|SSF52540 MEALZ_RS08645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PF04955|PIRSF016919 MEALZ_RS08650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MF_01384|PF01774|PTHR33643|PTHR33643:SF1 MEALZ_RS08655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002026|IPR012010 Urease, gamma subunit|Urease, gamma/gamma-beta subunit GO:0009039|GO:0016151|GO:0019627|GO:0043419 G3DSA:3.30.280.10|MF_00739|PD002319|PF00547|PIRSF001223|PTHR33569|PTHR33569:SF1|SSF54111|TIGR00193 MEALZ_RS08660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002019 Urease, beta subunit G3DSA:2.10.150.10|MF_01954|PF00699|PTHR33569|PTHR33569:SF1|SSF51278|TIGR00192 MEALZ_RS08665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005848|IPR006680|IPR011059|IPR011612|IPR017950|IPR029754|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain|Urease active site|Urease alpha-subunit, N-terminal domain|Urease nickel binding site|Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_01953|PF00449|PF01979|PR01752|PS00145|PS01120|PTHR22642|PTHR22642:SF7|SSF51338|SSF51556|TIGR01792 MEALZ_RS08670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004029|IPR007864|IPR012406 UreE urease accessory, N-terminal|Urease accessory protein UreE|Urease accessory protein UreE, C-terminal domain GO:0005737|GO:0006457|GO:0006461|GO:0016151|GO:0018307|GO:0019627 G3DSA:2.60.260.20|G3DSA:3.30.70.790|MF_00822|PF02814|PF05194|PIRSF036402|SM00988|SSF69287|SSF69737 MEALZ_RS08675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MF_01385|PF01730|PIRSF009467|PTHR33620 MEALZ_RS08680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003495|IPR004400|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|P-loop containing nucleoside triphosphate hydrolase|Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 G3DSA:3.40.50.300|MF_01389|PF02492|PIRSF005624|PTHR31715|SSF52540|TIGR00101 MEALZ_RS08685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|PTHR12128|PTHR12128:SF34|SM01130|SSF51569|TIGR00674 MEALZ_RS08690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010653 NlpB/DapX lipoprotein PF06804 MEALZ_RS08695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010073|IPR010918|IPR016188|IPR029062 AIR synthase-related protein, C-terminal domain|Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase|PurM-like, N-terminal domain GO:0004642|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.40.50.880|MF_00419|PF02769|PF13507|PTHR10099|PTHR10099:SF5|SM01211|SSF109736|SSF52317|SSF55326|SSF56042|SSF82697|TIGR01735 MEALZ_RS08700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002068|IPR008978|IPR031107 Alpha crystallin/Hsp20 domain|HSP20-like chaperone|Small heat shock protein HSP20 G3DSA:2.60.40.790|PF00011|PTHR11527|PTHR11527:SF118|SSF49764 MEALZ_RS08705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain GO:0005618|GO:0006508|GO:0008237|GO:0016805 G3DSA:3.30.1380.10|MF_01924|PF01427|PIRSF026671|PTHR22935|PTHR22935:SF67|SSF55166 MEALZ_RS08710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR004107|IPR011010|IPR011946|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase, integron-type|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13495|PTHR30349|PTHR30349:SF28|SSF56349|TIGR02249 MEALZ_RS08730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 MEALZ_RS08745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PF04365 MEALZ_RS08750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022148 CopG antitoxin PF12441 MEALZ_RS08755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025992 Haem-binding domain PF14376|PTHR30600|PTHR30600:SF7 MEALZ_RS08760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|PTHR34322|PTHR34322:SF1|SM01321|SSF143422 MEALZ_RS08765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009288|IPR013024 Butirosin biosynthesis, BtrG-like|Gamma-glutamylcyclotransferase, AIG2-like G3DSA:3.10.490.10|PF06094|SSF110857 MEALZ_RS08770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006383|IPR006385|IPR023214 HAD-like domain|HAD-superfamily hydrolase, subfamily IB, PSPase-like|HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial GO:0008152|GO:0016791 G3DSA:1.20.1440.100|G3DSA:3.40.50.1000|PF12710|PTHR10000|PTHR10000:SF10|SSF56784|TIGR01488|TIGR01490 MEALZ_RS08775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR015797|IPR020084|IPR020476|IPR022927 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|RNA pyrophosphohydrolase RppH GO:0016787 G3DSA:3.90.79.10|MF_00298|PF00293|PR00502|PS00893|PTHR23114|SSF55811 MEALZ_RS08780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR013622|IPR026575|IPR029052 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal|3,5-cyclic adenosine monophosphate phosphodiesterase CpdA|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0004115|GO:0016787 G3DSA:3.60.21.10|MF_00905|PD587589|PF00149|PTHR12905|PTHR12905:SF7|SSF56300 MEALZ_RS08785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR001048|IPR010167|IPR016181 Acyl-CoA N-acyltransferase|Amino-acid N-acetyltransferase (ArgA)|Aspartate/glutamate/uridylate kinase|GNAT domain GO:0004042|GO:0005737|GO:0006526|GO:0008080 G3DSA:3.40.1160.10|G3DSA:3.40.630.30|MF_01105|PF00583|PF00696|PIRSF000423|PTHR30602|PTHR30602:SF3|SSF53633|SSF55729|TIGR01890 MEALZ_RS08790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|PTHR21000|PTHR21000:SF5|SSF143975|SSF52016|TIGR00110 MEALZ_RS08795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003646|IPR016476 SH3 domain protein|SH3-like domain, bacterial-type PF08239|TIGR04211 MEALZ_RS08800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|PTHR11405|PTHR11405:SF1|SSF53671|TIGR00658 MEALZ_RS08805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PTHR11986|PTHR11986:SF79|SSF53383|TIGR00707 MEALZ_RS08810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002109|IPR004480|IPR012336|IPR014434 Glutaredoxin|Monothiol glutaredoxin|Monothiol glutaredoxin-related|Thioredoxin-like fold GO:0009055|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00462|PIRSF005894|PTHR10293|SSF52833|TIGR00365 MEALZ_RS08815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005987|IPR012337|IPR013520 Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain|Ribonuclease T GO:0003676|GO:0004540|GO:0006396 G3DSA:3.30.420.10|MF_00157|PF00929|PTHR30231|PTHR30231:SF2|SM00479|SSF53098|TIGR01298 MEALZ_RS08820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805|PTHR30035|PTHR30035:SF3 MEALZ_RS08825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|PTHR30543|PTHR30543:SF6|SSF52218 MEALZ_RS08830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001264|IPR001460|IPR012338|IPR023346 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|PF00905|PF00912|SSF53955|SSF56601 MEALZ_RS08835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase, small subunit|Carbamoyl-phosphate synthase, small subunit N-terminal domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|PTHR11405|SM01097|SSF52021|SSF52317|TIGR01368 MEALZ_RS08840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00866|PS00867|PTHR11405|PTHR11405:SF5|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 MEALZ_RS08845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PTHR30437|SSF46557|SSF54534|TIGR01462 MEALZ_RS08850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001890 RNA-binding, CRM domain GO:0003723 G3DSA:3.30.110.60|PD010559|PF01985|PTHR31846|SM01103|SSF75471 MEALZ_RS08855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|PTHR10920|PTHR10920:SF20|SSF53335 MEALZ_RS08860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 MEALZ_RS08865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF15|SSF53738|SSF55957|TIGR01455 MEALZ_RS08870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|PTHR21139|SSF51351|TIGR00419 MEALZ_RS08875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|PTHR34182|TIGR00810 MEALZ_RS08890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF12706|PTHR12553|SM00849|SSF56281 MEALZ_RS08895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 MEALZ_RS08905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009799|IPR011008 Dimeric alpha-beta barrel|EthD domain G3DSA:3.30.70.900|PF07110|SSF54909|TIGR02118 MEALZ_RS08910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30346|SSF46785|SSF53850 MEALZ_RS08915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|PTHR10458:SF4|SSF56420|TIGR00079 MEALZ_RS08920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010767 Campylobacter phage CGC-2007, Cje0229 PF07087 MEALZ_RS08925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001264|IPR011812|IPR023346 Glycosyl transferase, family 51|Lysozyme-like domain|Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 G3DSA:1.10.3810.10|MF_00766|PF00912|PTHR30400|PTHR30400:SF0|SSF53955|TIGR02070 MEALZ_RS08935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005123|IPR006620 Oxoglutarate/iron-dependent dioxygenase|Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016491|GO:0016705|GO:0031418|GO:0055114 PF13640|PTHR12907|PTHR12907:SF14|SM00702 MEALZ_RS08940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002052|IPR007848|IPR017237|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|S-adenosyl-L-methionine-dependent methyltransferase|rRNA (guanine-N2-)-methyltransferase, RsmD GO:0003676|GO:0005737|GO:0008168|GO:0008990|GO:0031167|GO:0032259 G3DSA:3.40.50.150|MF_01859|PF05175|PIRSF037565|PS00092|PTHR18895|PTHR18895:SF6|SSF53335 MEALZ_RS08950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004646|IPR004647|IPR011167 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain|Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain|Iron-dependent fumarate hydratase GO:0004333|GO:0006091|GO:0016829|GO:0016836 G3DSA:3.20.130.10|PF05681|PF05683|PIRSF001394|PTHR30389|PTHR30389:SF1|SSF117457|TIGR00722|TIGR00723 MEALZ_RS08955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 MEALZ_RS08970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011031|IPR012138 Hydroxylamine oxidase|Multihaem cytochrome G3DSA:1.10.780.10|G3DSA:1.20.850.10|G3DSA:3.90.10.10|PF13447|PIRSF000242|SSF48695 MEALZ_RS08975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR030891 HaoA-associated protein HaoB TIGR04392 MEALZ_RS08985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 PF07238 MEALZ_RS08990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 G3DSA:3.30.1360.20|PF01329|PTHR12599|SSF55248 MEALZ_RS09000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000121|IPR002192|IPR006319|IPR008279|IPR013815|IPR013816|IPR015813|IPR018274|IPR023151 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, active site|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Phosphoenolpyruvate synthase|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0006090|GO:0008986|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PIRSF000854|PS00370|PS00742|PTHR22931|PTHR22931:SF7|SSF51621|SSF52009|SSF56059|TIGR01418 MEALZ_RS09005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003846 Uncharacterised protein family UPF0061 MF_00692|PF02696|PTHR32057 MEALZ_RS09010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain G3DSA:3.10.50.40|PF13616|PS01096|PTHR10657|SSF109998|SSF54534 MEALZ_RS09015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002634 BolA protein G3DSA:3.30.70.1500|PF01722|PIRSF003113|PTHR12735|PTHR12735:SF3|SSF82657 MEALZ_RS09020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005545|IPR011008 Dimeric alpha-beta barrel|YCII-related G3DSA:3.30.70.1060|PF03795|PTHR33606|SSF54909 MEALZ_RS09025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006008 Intracellular septation protein A GO:0016021 MF_00189|PF04279|PTHR36917|PTHR36917:SF1|TIGR00997 MEALZ_RS09035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023163 SMc04008-like domain G3DSA:1.10.3340.10|PF06844|SSF158757 MEALZ_RS09040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 MEALZ_RS09045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR016163|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0016620|GO:0050661|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|PTHR11063|PTHR11063:SF8|SSF53720|TIGR00407 MEALZ_RS09050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Probable nicotinate-nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|PTHR12039|SSF52374|TIGR00125|TIGR00482 MEALZ_RS09055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|PTHR21043|SSF81301|TIGR00090 MEALZ_RS09060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 G3DSA:3.90.960.10|PF04073|PTHR30411|SSF55826 MEALZ_RS09070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR022907|IPR029060 PIN domain|PIN domain-like|VapC family GO:0004540 G3DSA:3.40.50.1010|MF_00265|PF01850|PTHR33653|PTHR33653:SF4|SSF88723 MEALZ_RS09075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019239 Bacterial antitoxin of type II TA system, VapB PF09957 MEALZ_RS09080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001845|IPR011991 HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PTHR33154|SM00418|SSF46785 MEALZ_RS09085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023485 Phosphotyrosine protein phosphatase I superfamily G3DSA:3.40.50.270|PF01451|PTHR11717|PTHR11717:SF18|SM00226|SSF52788 MEALZ_RS09090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002657|IPR004706 Arsenical-resistance protein Acr3|Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0015103|GO:0015297|GO:0016020|GO:0016021 PF01758|PIRSF005508|PTHR10361|PTHR10361:SF31|TIGR00832 MEALZ_RS09095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 PF06953 MEALZ_RS09100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR016300|IPR025723|IPR027417|IPR027541 AAA+ ATPase domain|Anion-transporting ATPase-like domain|Arsenical pump ATPase, ArsA/GET3|Arsenical pump-driving ATPase|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015446|GO:0016887|GO:0071722 G3DSA:3.40.50.300|PF02374|PIRSF001327|PTHR10803|PTHR10803:SF0|SM00382|SSF52540|TIGR00345|TIGR04291 MEALZ_RS09105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF13 MEALZ_RS09110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF81|SM00228|SSF50156|SSF50494 MEALZ_RS09120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001697|IPR011037|IPR015793|IPR015806|IPR015813 Pyruvate kinase|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|PF00224|PTHR11817|PTHR11817:SF28|SSF50800|SSF51621 MEALZ_RS09125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|PTHR30570|SSF53850 MEALZ_RS09130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR011864|IPR022182 ABC transporter phosphate permease PstC, N-terminal domain|ABC transporter type 1, transmembrane domain MetI-like|Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006810|GO:0006817|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PF12501|PTHR30425|PTHR30425:SF3|SSF161098|TIGR02138 MEALZ_RS09135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR005672|IPR024573 ABC transporter type 1, transmembrane domain MetI-like|Domain of unknown function DUF3333|Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0006810|GO:0016020|GO:0035435 G3DSA:1.10.3720.10|PF00528|PF11812|PTHR30425|PTHR30425:SF2|SSF161098|TIGR00974 MEALZ_RS09140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005670|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate transport system permease protein 1 GO:0005315|GO:0005524|GO:0016020|GO:0016887|GO:0035435 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF585|SM00382|SSF52540|TIGR00972 MEALZ_RS09145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR026022|IPR028366 PhoU domain|Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 G3DSA:1.20.58.220|PF01895|PIRSF003107|PTHR10010|PTHR10010:SF14|SSF109755|TIGR02135 MEALZ_RS09160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PTHR13748|PTHR13748:SF41|SSF52540 MEALZ_RS09165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PTHR12176|PTHR12176:SF29|SSF53335 MEALZ_RS09175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000835|IPR011991|IPR023187 MarR-type HTH domain|Transcriptional regulator MarR-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PS01117|PTHR33164|SM00347|SSF46785 MEALZ_RS09180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021830 Protein of unknown function DUF3422 PF11902 MEALZ_RS09185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PTHR23088|PTHR23088:SF11|SSF56317 MEALZ_RS09190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 G3DSA:3.75.10.10|PF04371|PTHR31377|PTHR31377:SF0|SSF55909 MEALZ_RS09195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003395|IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase|RecF/RecN/SMC, N-terminal GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF02463|PIRSF003128|PTHR11059|SSF52540|TIGR00634 MEALZ_RS09200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|PTHR20275|SSF111331 MEALZ_RS09205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002571|IPR005104|IPR011991|IPR021153|IPR029016 GAF domain-like|Heat-inducible transcription repressor HrcA|Heat-inducible transcription repressor HrcA, C-terminal|Winged helix-turn-helix DNA-binding domain|Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.30.450.40|MF_00081|PF01628|PF03444|PIRSF005485|PTHR34824|SSF46785|SSF55781|TIGR00331 MEALZ_RS09210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|PTHR21237|SSF51064|SSF58014 MEALZ_RS09215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.30.30|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|PTHR19375|PTHR19375:SF173|SSF100920|SSF100934|SSF53067|TIGR02350 MEALZ_RS09220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF231|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 MEALZ_RS09225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|PTHR20836|PTHR20836:SF0|SSF51735|SSF55347|TIGR00036 MEALZ_RS09235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000283|IPR001041|IPR006478|IPR006655|IPR006656|IPR006657|IPR006963|IPR009010|IPR012675|IPR017896|IPR017900 2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aspartate decarboxylase-like domain|Beta-grasp domain|Formate dehydrogenase, alpha subunit|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, prokaryotic, conserved site|NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0008863|GO:0009055|GO:0015942|GO:0016020|GO:0016491|GO:0030151|GO:0042773|GO:0051536|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.10.20.30|G3DSA:3.30.70.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04879|PF13187|PF13510|PIRSF036643|PS00198|PS00490|PS00641|PTHR11615|PTHR11615:SF112|SM00926|SSF50692|SSF53706|SSF54292|SSF54862|TIGR01591 MEALZ_RS09240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001949|IPR011538|IPR012336|IPR019554|IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site|Soluble ligand binding domain|Thioredoxin-like fold GO:0008137|GO:0010181|GO:0051539|GO:0055114 G3DSA:3.40.30.10|PF01257|PF01512|PF10531|PF10589|PS00645|PTHR11780|PTHR11780:SF10|SM00928|SSF140490|SSF142019|SSF142984|SSF52833 MEALZ_RS09245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF11|SSF46785|SSF53850 MEALZ_RS09250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279|IPR030829 Metallo-beta-lactamase|Quinoprotein relay system zinc metallohydrolase 2 G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF95|SM00849|SSF56281|TIGR04559 MEALZ_RS09255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013783|IPR014756|IPR014880|IPR030831|IPR032711 Ig-like SoxY domain|Immunoglobulin E-set|Immunoglobulin-like fold|Quinoprotein dehydrogenase-associated SoxYZ-like carrier|Sulphur oxidation protein SoxZ G3DSA:2.60.40.10|PF08770|PF13501|SSF81296|TIGR04557 MEALZ_RS09260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS09270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005180 Domain of unknown function DUF302 G3DSA:3.30.310.70|PF03625|SSF103247 MEALZ_RS09275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013482|IPR025877|IPR029044 MobA-like NTP transferase|Molybdenum cofactor guanylyltransferase|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0006777 G3DSA:3.90.550.10|MF_00316|PF12804|PTHR19136|PTHR19136:SF81|SSF53448|TIGR02665 MEALZ_RS09280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003786|IPR016193 Cytidine deaminase-like|Protein FdhD GO:0003824|GO:0016783 G3DSA:3.10.20.10|G3DSA:3.40.140.10|PF02634|PIRSF015626|PTHR30592|PTHR30592:SF2|SSF53927 MEALZ_RS09285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021363 Protein of unknown function DUF2835 PF11197 MEALZ_RS09290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435|PTHR10120|PTHR10120:SF19 MEALZ_RS09295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|PTHR19328|PTHR19328:SF33|SSF50952 MEALZ_RS09300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR004385|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site|Nucleoside diphosphate pyrophosphatase GO:0016787|GO:0016818|GO:0046872 G3DSA:3.90.79.10|PF00293|PS00893|PTHR11839|PTHR11839:SF5|SSF55811|TIGR00052 MEALZ_RS09310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF25|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 MEALZ_RS09315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001509|IPR008089|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain|Nucleotide sugar epimerase GO:0003824|GO:0005975|GO:0016857|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PR01713|PTHR10366|PTHR10366:SF77|SSF51735 MEALZ_RS09320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012657 23S rRNA-intervening sequence protein G3DSA:1.20.1440.60|PF05635|PTHR38471|PTHR38471:SF2|SSF158446|TIGR02436 MEALZ_RS09325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR017522|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|Sugar transferase, PEP-CTERM, Stp2 G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756|TIGR03088 MEALZ_RS09330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001962|IPR006426|IPR014729|IPR017539|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Exosortase 1 system-associated amidotransferase 1|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235|TIGR01536|TIGR03108 MEALZ_RS09340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027599 PqqD family protein, HPr-rel-A system TIGR04353 MEALZ_RS09345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417|IPR027600 HprK-related kinase A|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF53795|TIGR04352 MEALZ_RS09350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF14907 MEALZ_RS09360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR017039 Virulence factor BrkB|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF03631|PTHR30213|PTHR30213:SF0|SSF46785|TIGR00765 MEALZ_RS09365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003661|IPR004358|IPR007895|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|MASE1|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF05231|PR00344|PTHR24423|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55874 MEALZ_RS09370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 MEALZ_RS09380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PIRSF001535|PR01046|PTHR11451|PTHR11451:SF3|SSF52954|SSF55681|SSF55826|TIGR00409 MEALZ_RS09395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001347|IPR001754|IPR011060|IPR013785|IPR017552|IPR017553 3-hexulose-6-phosphate isomerase|3-hexulose-6-phosphate synthase|Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Ribulose-phosphate binding barrel|Sugar isomerase (SIS) GO:0003824|GO:0004590|GO:0005975|GO:0006207|GO:0008152|GO:0016853|GO:0030246|GO:0043801 G3DSA:3.20.20.70|G3DSA:3.40.50.10490|PF00215|PF01380|PTHR35039|SM00934|SSF51366|SSF53697|TIGR03127|TIGR03128 MEALZ_RS09400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001958|IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain|Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PR01035|PTHR23510|PTHR23510:SF6|SSF103473 MEALZ_RS09405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|PTHR10302|SSF50249|TIGR00621 MEALZ_RS09410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000540|IPR002898|IPR022522 Flagellar motor protein MotA, conserved site|Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|PTHR30433|PTHR30433:SF2 MEALZ_RS09415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PTHR30329|PTHR30329:SF4|SSF103088 MEALZ_RS09420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238 MEALZ_RS09425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004143|IPR004408|IPR008988|IPR011991|IPR013196|IPR030855 Bifunctional ligase/repressor BirA|Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Helix-turn-helix, type 11|Transcriptional repressor, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0004077|GO:0006355|GO:0006464 G3DSA:1.10.10.10|G3DSA:2.30.30.100|G3DSA:3.30.930.10|MF_00978|PF03099|PF08279|PTHR12835|SSF46785|SSF50037|SSF55681|TIGR00121 MEALZ_RS09430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|PTHR34265|SSF53067|TIGR00671 MEALZ_RS09440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|PTHR21581|PTHR21581:SF8|SSF56601 MEALZ_RS09445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|PTHR30582:SF1|SSF141523 MEALZ_RS09450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019619 Protein of unknown function DUF2490 PF10677 MEALZ_RS09455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007497|IPR016907 Protein of unknown function DUF541|Uncharacterised conserved protein UCP029033, periplasmic protein PF04402|PIRSF029033 MEALZ_RS09460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000253|IPR008984|IPR017735 Forkhead-associated (FHA) domain|SMAD/FHA domain|Type VI secretion system, FHA domain-containing protein GO:0005515 G3DSA:2.60.200.20|PF00498|PTHR16079|PTHR16079:SF3|SM00240|SSF49879|TIGR03354 MEALZ_RS09465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010263 Type VI secretion protein, VC_A0114 PF05936|PTHR35566|PTHR35566:SF1|TIGR03353 MEALZ_RS09470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665|IPR017732|IPR017733 OmpA-like domain|Type IV / VI secretion system, DotU|Type VI secretion system peptidoglycan-associated domain G3DSA:3.30.1330.60|PF00691|PF09850|PTHR30329|PTHR30329:SF7|SSF103088|TIGR03349|TIGR03350 MEALZ_RS09475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009612|IPR010623|IPR017731|IPR025743|IPR027417 ImcF-related|ImcF-related, N-terminal domain|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system IcmF, C-terminal|Type VI secretion system, IcmF G3DSA:3.40.50.300|PF06744|PF06761|PF14331|PTHR36153|PTHR36153:SF1|SSF52540|TIGR03348 MEALZ_RS09490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010657|IPR017740 ImpA, N-terminal|Type VI secretion system-associated, ImpA PF06812|PTHR37951|PTHR37951:SF1|TIGR03363 MEALZ_RS09495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 PF05591|PIRSF028301|PTHR35850|PTHR35850:SF1|TIGR03358 MEALZ_RS09500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath PF05943|PTHR35565|PTHR35565:SF3|TIGR03355 MEALZ_RS09505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008514 Type VI secretion system effector, Hcp G3DSA:2.30.110.20|PF05638|PTHR36152|PTHR36152:SF1|SSF141452 MEALZ_RS09510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009211|IPR011990 Predicted virulence protein, SciE type|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF07024|PIRSF029288|SSF144059 MEALZ_RS09515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007048|IPR017737 GpW/Gp25/anti-adapter protein IraD|Type VI secretion system, lysozyme-related protein PF04965|PTHR38595|PTHR38595:SF2|SSF160719|TIGR03357 MEALZ_RS09520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010272 Type VI secretion system, TssF-like PF05947|PIRSF028304|PTHR35370|PTHR35370:SF1|TIGR03359 MEALZ_RS09525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010732 Type VI secretion, TssG-like PF06996|PTHR35564|PTHR35564:SF2|TIGR03347 MEALZ_RS09530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017729|IPR018368|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|P-loop containing nucleoside triphosphate hydrolase|Type VI secretion system, ATPase ClpV1 GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF07724|PF10431|PR00300|PS00870|PTHR11638|PTHR11638:SF122|SM00382|SM01086|SSF52540|SSF81923|TIGR03345 MEALZ_RS09535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022118 Peptidase C70, AvrRpt2 PF12385 MEALZ_RS09545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006531|IPR006533|IPR017847 Gp5 N-terminal|Type VI secretion system, RhsGE-associated Vgr family subset|Type VI secretion system, RhsGE-associated Vgr protein G3DSA:2.40.50.230|G3DSA:3.55.50.10|PF05954|PTHR32305|PTHR32305:SF7|SSF69255|SSF69279|SSF69349|TIGR01646|TIGR03361 MEALZ_RS09555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008727 PAAR motif PF05488 MEALZ_RS09560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006531|IPR006533|IPR010609|IPR017847 Gp5 N-terminal|Gp5, C-terminal|Type VI secretion system, RhsGE-associated Vgr family subset|Type VI secretion system, RhsGE-associated Vgr protein G3DSA:2.40.50.230|G3DSA:3.55.50.10|PF05954|PF06715|PTHR32305|PTHR32305:SF7|SSF69255|SSF69279|SSF69349|TIGR01646|TIGR03361 MEALZ_RS09570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018683 Domain of unknown function DUF2169 PF09937 MEALZ_RS09580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016039 Thiolase-like GO:0003824|GO:0008152 SSF53901 MEALZ_RS09585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025425|IPR028917 Domain of unknown function DUF4150|Tox-GHH2 domain PF13665|PF15635 MEALZ_RS09595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS09600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS09610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS09615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011959|IPR016024 Armadillo-type fold|Conserved hypothetical protein CHP02270 GO:0005488 SSF48371|TIGR02270 MEALZ_RS09620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009 Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 MEALZ_RS09625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR011009|IPR011990|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Tetratricopeptide-like helical domain GO:0004672|GO:0005515|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:1.25.40.10|G3DSA:3.30.200.20|PF00069|PS00107|PTHR24362|PTHR24362:SF160|SSF48452|SSF56112 MEALZ_RS09635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001932|IPR013767 PAC motif|PAS domain|PAS fold|PPM-type phosphatase domain GO:0003824|GO:0006355 G3DSA:3.30.450.20|PF00989|PF07228|PF13426|PTHR21021|PTHR21021:SF19|SM00086|SM00091|SM00331|SSF55785|SSF81606|TIGR00229 MEALZ_RS09640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF1|SSF51905 MEALZ_RS09645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004039|IPR018527|IPR024922|IPR024935 Rubredoxin|Rubredoxin domain|Rubredoxin, iron-binding site|Rubredoxin-type fold GO:0005506|GO:0009055|GO:0046872 G3DSA:2.20.28.10|PF00301|PIRSF000071|PR00163|PS00202|SSF57802 MEALZ_RS09650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000688|IPR020538 Hydrogenase nickel incorporation protein HypA/HybF|Hydrogenase nickel incorporation protein HypA/HybF, conserved site GO:0006464|GO:0016151 MF_00213|PF01155|PIRSF004761|PS01249|PTHR34535|TIGR00100 MEALZ_RS09655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001109|IPR019812 Hydrogenase assembly chaperone, conserved site|Hydrogenase expression/formation protein, HupF/HypC PF01455|PR00445|PS01097|PTHR35177|PTHR35177:SF2|SSF159127|TIGR00074 MEALZ_RS09660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein PF04955|PIRSF016919 MEALZ_RS09665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010918|IPR011854|IPR016188 AIR synthase-related protein, C-terminal domain|Hydrogenase expression/formation protein HypE|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PF02769|PIRSF005644|PTHR30303|PTHR30303:SF0|SSF55326|SSF56042|TIGR02124 MEALZ_RS09670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF518|SM00448|SM00862|SSF52172 MEALZ_RS09675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001902|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 PF00916|PTHR11814|PTHR11814:SF112 MEALZ_RS09680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|SSF52402 MEALZ_RS09685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001792|IPR004421|IPR006070|IPR011125|IPR017945|IPR017968 Acylphosphatase, conserved site|Acylphosphatase-like domain|Carbamoyltransferase, HypF-type|DHBP synthase RibB-like alpha/beta domain|YrdC-like domain|Zinc finger, HypF-type GO:0003725|GO:0008270|GO:0016743|GO:0046872|GO:0046944 G3DSA:3.30.70.100|G3DSA:3.90.870.10|PF00708|PF01300|PF07503|PIRSF006256|PS00150|PTHR10029|PTHR10029:SF4|SSF53067|SSF54975|SSF55821|TIGR00143 MEALZ_RS09690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002780 Hydrogenase formation HypD protein GO:0046872 PF01924|PIRSF005622|PTHR30149|PTHR30149:SF0|TIGR00075 MEALZ_RS09695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003495|IPR004392|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Hydrogenase accessory protein HypB|P-loop containing nucleoside triphosphate hydrolase GO:0006461|GO:0016151 G3DSA:3.40.50.300|PF02492|PTHR30134|PTHR30134:SF0|SSF52540|TIGR00073 MEALZ_RS09700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR10374|PTHR10374:SF8|SSF54593 MEALZ_RS09705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009959|IPR011721|IPR032710 Conserved hypothetical protein CHP02096|NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427|TIGR02096 MEALZ_RS09710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000192|IPR015421|IPR015422|IPR015424 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PTHR11601|PTHR11601:SF31|SSF53383 MEALZ_RS09715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 MEALZ_RS09725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009664|IPR011051|IPR014710 Protein of unknown function DUF1255|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|MF_01537|PF06865|PTHR36540|PTHR36540:SF1|SSF51182 MEALZ_RS09735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR003593|IPR007502|IPR010222|IPR011545|IPR011709|IPR014001|IPR024590|IPR027417 AAA+ ATPase domain|DEAD/DEAH box helicase domain|Domain of unknown function DUF1605|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase-associated domain|P-loop containing nucleoside triphosphate hydrolase|RNA helicase HrpA|RNA helicase HrpA, C-terminal GO:0003676|GO:0004004|GO:0004386|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PF04408|PF07717|PF11898|PTHR18934|PTHR18934:SF109|SM00382|SM00487|SM00490|SM00847|SSF52540|TIGR01967 MEALZ_RS09740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023824 Conserved hypothetical protein CHP04073, exosortase-affiliated TIGR04073 MEALZ_RS09745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010719|IPR029063 Putative rRNA methylase|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF06962|PTHR35276|PTHR35276:SF1|SSF53335 MEALZ_RS09750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.9.10|G3DSA:3.50.50.60|PF01266|SSF51971|SSF54373 MEALZ_RS09755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014984 HopJ type III effector protein G3DSA:3.20.160.10|PF08888 MEALZ_RS09765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|PTHR30308|PTHR30308:SF2|SSF74982|TIGR00086 MEALZ_RS09770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 PF00209|PR00176|PS00610|PTHR11616|PTHR11616:SF167|SSF161070 MEALZ_RS09775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005031|IPR023393 Coenzyme Q-binding protein COQ10, START domain|START-like domain G3DSA:3.30.530.20|PF03364|PTHR12901|PTHR12901:SF7|SSF55961 MEALZ_RS09780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005346|IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|RnfH protein G3DSA:3.10.20.280|MF_00460|PF03658|PTHR37483|PTHR37483:SF1|SSF54285 MEALZ_RS09785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007450|IPR026592 Lipoprotein SmpA/OmlA|Outer membrane protein assembly factor BamE GO:0019867 MF_00925|PF04355|PTHR37482|PTHR37482:SF1 MEALZ_RS09790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|SSF46785 MEALZ_RS09795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|PTHR30489|PTHR30489:SF8|TIGR02212 MEALZ_RS09800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR011924|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Lipoprotein releasing system, ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF111|SM00382|SSF52540|TIGR02211 MEALZ_RS09805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018639 Domain of unknown function DUF2062 PF09835|PTHR40547|PTHR40547:SF1 MEALZ_RS09810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279|IPR004477|IPR004797|IPR025405 ComEC/Rec2-related protein|Competence protein ComEC/Rec2|Domain of unknown function DUF4131|Metallo-beta-lactamase GO:0016021|GO:0030420 G3DSA:3.60.15.10|PF00753|PF03772|PF13567|PTHR30619|PTHR30619:SF2|SM00849|SSF56281|TIGR00360|TIGR00361 MEALZ_RS09815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000944|IPR011991|IPR012318|IPR014290|IPR030489 Crp-type HTH domain|SUF system FeS cluster assembly regulator|Transcription regulator Rrf2-type|Transcription regulator Rrf2-type, conserved site|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF02082|PS01332|PTHR33221|PTHR33221:SF2|SM00419|SSF46785|TIGR00738|TIGR02944 MEALZ_RS09820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000825|IPR010231 SUF system FeS cluster assembly, SufB|SUF system FeS cluster assembly, SufBD GO:0016226 PF01458|PTHR30508|PTHR30508:SF1|SSF101960|TIGR01980 MEALZ_RS09825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:3.30.920.30|SSF54786 MEALZ_RS09830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|PTHR34504|SSF143100 MEALZ_RS09835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR010230|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|FeS cluster assembly SUF system, ATPase SufC|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF85|SM00382|SSF52540|TIGR01978 MEALZ_RS09840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000825|IPR011542 SUF system FeS cluster assembly, SufBD|SUF system FeS cluster assembly, SufD GO:0016226 PF01458|PTHR30508|PTHR30508:SF0|SSF101960|TIGR01981 MEALZ_RS09845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR35400|PTHR35400:SF1|SSF52980 MEALZ_RS09850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000192|IPR010970|IPR015421|IPR015422|IPR015424|IPR016454|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase, SufS|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0006534|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|PTHR11601|PTHR11601:SF17|SSF53383|TIGR01979 MEALZ_RS09855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PF01592|PTHR10093|SSF82649|TIGR01994 MEALZ_RS09860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007536|IPR029063 Ribosomal RNA small subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008990|GO:0031167 G3DSA:3.40.50.150|MF_01523|PF04445|PTHR36112|PTHR36112:SF1|SSF53335 MEALZ_RS09865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 G3DSA:2.102.10.10|PF00355|PTHR21496|SSF50022 MEALZ_RS09870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000352|IPR004374|IPR005139|IPR014720|IPR020853 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor 2, bacterial|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00094|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF6|SM00937|SSF75620|TIGR00020 MEALZ_RS09875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|PTHR22594|PTHR22594:SF4|SSF50249|SSF55681|TIGR00499 MEALZ_RS09880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR34107|SSF52980 MEALZ_RS09885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006976 VanZ-like PF04892 MEALZ_RS09895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024370 PBP domain G3DSA:3.40.190.10|PF12849|SSF53850 MEALZ_RS09900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 MEALZ_RS09905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR013767|IPR029150|IPR029787 Double Cache domain 3|EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold GO:0006355 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00989|PF00990|PF14827|PTHR33121|PTHR33121:SF10|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS09910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016181|IPR022484 Acyl-CoA N-acyltransferase|PEP-CTERM/exosortase system-associated acyltransferase, predicted G3DSA:3.40.630.30|PF13444|SSF55729|TIGR03694 MEALZ_RS09915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 MEALZ_RS09920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised deoxyribonuclease TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01137|PTHR10060|PTHR10060:SF20|SSF51556|TIGR00010 MEALZ_RS09925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 PF07238 MEALZ_RS09930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004622|IPR015199|IPR027417 DNA polymerase III, delta prime subunit|DNA polymerase III, delta subunit, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF09115|PF13177|PTHR11669|PTHR11669:SF8|SSF52540|TIGR00678 MEALZ_RS09935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018094|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PTHR10344|SSF52540|TIGR00041 MEALZ_RS09940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003770|IPR013087 Uncharacterised protein family UPF0755, YceG-like|Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 G3DSA:3.30.160.60|PF02618|PTHR30518|PTHR30518:SF2|TIGR00247 MEALZ_RS09945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001544|IPR017824|IPR018300 Aminodeoxychorismate lyase, class IV|Aminotransferase class IV|Aminotransferase, class IV, conserved site GO:0003824|GO:0008152|GO:0008696|GO:0030170|GO:0046656 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF55|SSF56752|TIGR03461 MEALZ_RS09950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|PTHR11712|SM00825|SSF53901|TIGR03150 MEALZ_RS09955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003231|IPR006162|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|PTHR20863|SSF47336|TIGR00517 MEALZ_RS09960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR011284|IPR016040|IPR020904 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0004316|GO:0006633|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF635|SM00822|SSF51735|TIGR01830 MEALZ_RS09965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001227|IPR004410|IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase domain|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl CoA-acyl carrier protein transacylase, FabD-type|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0004314|GO:0008152|GO:0016740 G3DSA:3.30.70.250|G3DSA:3.40.366.10|PF00698|PIRSF000446|PTHR10982|SM00827|SSF52151|SSF55048|TIGR00128 MEALZ_RS09970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|PTHR18919|PTHR18919:SF109|SSF53901|TIGR00747 MEALZ_RS09975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003664|IPR012281|IPR024084 Fatty acid synthesis PlsX protein|Isopropylmalate dehydrogenase-like domain|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016616|GO:0016747|GO:0055114 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|PTHR30100|PTHR30100:SF1|SSF53659|TIGR00182 MEALZ_RS09980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003772 Protein of unknown function DUF177 PF02620|PTHR38099 MEALZ_RS09985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|PTHR11746|PTHR11746:SF102|SSF52972|TIGR00172 MEALZ_RS09990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF1|SSF109604 MEALZ_RS09995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000189|IPR008258|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|PF01464|PS00922|PTHR21666|SSF53955 MEALZ_RS10000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000432|IPR007696|IPR027417 DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.40.50.300|PF00488|PTHR11361|SM00534|SSF48334|SSF52540 MEALZ_RS10010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001474|IPR018234|IPR020602 GTP cyclohydrolase I|GTP cyclohydrolase I domain|GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 G3DSA:1.10.286.10|G3DSA:3.30.1130.10|MF_00223|PF01227|PS00859|PS00860|PTHR11109|SSF55620|TIGR00063 MEALZ_RS10015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001269|IPR004653|IPR013785|IPR018517 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0003824|GO:0008033|GO:0017150|GO:0050660|GO:0055114 G3DSA:3.20.20.70|MF_02041|PF01207|PIRSF006621|PS01136|SSF51395|TIGR00742 MEALZ_RS10020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|PTHR13061|SSF51161 MEALZ_RS10025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR018649 Band 7 domain|SHOCT domain PF09851|PF13421|PTHR37826|PTHR37826:SF2|SSF117892 MEALZ_RS10030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027392 Transcription factor zinc-finger PF13453 MEALZ_RS10040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13401|PTHR35894|PTHR35894:SF1|SM00382|SSF52540 MEALZ_RS10050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR013976|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|Metal-dependent hydrolase HDOD|RmlC-like jelly roll fold G3DSA:1.10.3150.10|G3DSA:2.60.120.10|PF00027|PF08668|PTHR33525|PTHR33525:SF2|SSF109604|SSF51206 MEALZ_RS10055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976|IPR014710|IPR018490 Cyclic nucleotide-binding-like|Metal-dependent hydrolase HDOD|RmlC-like jelly roll fold G3DSA:1.10.3150.10|G3DSA:2.60.120.10|PF08668|PTHR33525|PTHR33525:SF2|SSF109604|SSF51206 MEALZ_RS10060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976|IPR014710|IPR018490 Cyclic nucleotide-binding-like|Metal-dependent hydrolase HDOD|RmlC-like jelly roll fold G3DSA:1.10.3150.10|G3DSA:2.60.120.10|PF08668|PTHR33525|PTHR33525:SF2|SSF109604|SSF51206 MEALZ_RS10065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001567|IPR024077|IPR024079|IPR024080 Metallopeptidase, catalytic domain|Neurolysin/Thimet oligopeptidase, N-terminal|Neurolysin/Thimet oligopeptidase, domain 2|Peptidase M3A/M3B GO:0004222|GO:0006508|GO:0008237 G3DSA:1.10.1370.10|G3DSA:1.20.1050.40|G3DSA:3.40.390.10|PF01432|PTHR11804|PTHR11804:SF8|SSF55486 MEALZ_RS10070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002830|IPR012349|IPR023677 FMN-binding split barrel|UbiD decarboxylyase family|UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694|GO:0010181|GO:0016491|GO:0016831|GO:0055114 G3DSA:1.20.5.570|G3DSA:3.40.1670.10|MF_01636|PF01977|PTHR30108|PTHR30108:SF1|SSF143968|SSF50475|TIGR00148 MEALZ_RS10075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004265|IPR009410 Allene oxide cyclase|Plant disease resistance response protein GO:0009507|GO:0016853 PD329160|PF03018|SSF141493 MEALZ_RS10080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|PTHR11686:SF9|SSF56235 MEALZ_RS10085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024445 ISXO2-like transposase domain PF12762 MEALZ_RS10095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 MEALZ_RS10100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|SM00283|SSF58104 MEALZ_RS10110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|SSF51182 MEALZ_RS10115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR011712 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 G3DSA:3.30.565.10|PF07730|PTHR24421|PTHR24421:SF1|SSF55874 MEALZ_RS10120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF210|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS10130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000642|IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41 GO:0004222|GO:0005524|GO:0006508 G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF01434|PTHR23076|PTHR23076:SF61|SM00382|SSF140990|SSF52540 MEALZ_RS10150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002725 Protein of unknown function DUF45 PF01863|PTHR30399 MEALZ_RS10155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004473|IPR006935|IPR007409|IPR014001|IPR021810|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Protein of unknown function DUF3387|Restriction endonuclease, type I, HsdR|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0009035|GO:0009307|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PF11867|PTHR30195|PTHR30195:SF15|SM00487|SSF52540|TIGR00348 MEALZ_RS10165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|PTHR13504|PTHR13504:SF29|SSF140931 MEALZ_RS10175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007569|IPR011335 Domain of unknown function DUF559|Restriction endonuclease type II-like PF04480|PTHR38590|PTHR38590:SF1|SSF52980 MEALZ_RS10195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 MEALZ_RS10220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like G3DSA:3.40.50.1010|PF01850|PTHR33653|PTHR33653:SF2|SSF88723 MEALZ_RS10225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120|TIGR01552 MEALZ_RS10235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012931 TraG-like, N-terminal PF07916 MEALZ_RS10240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022262 Lipoprotein, putative TIGR03751 MEALZ_RS10245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021676 Protein of unknown function DUF3262 PF11660|TIGR03758 MEALZ_RS10250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019110 Uncharacterised protein family, RAQPRD PF09686|TIGR01690 MEALZ_RS10255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022266 Integrating conjugative element protein, PFL4697-type PF14348|TIGR03747 MEALZ_RS10260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019476|IPR022458|IPR022503|IPR027417|IPR032689 Conjugative coupling factor TraG/TraD|Conjugative coupling factor TraG/TraD, PFGI-1|P-loop containing nucleoside triphosphate hydrolase|TraD/TraG, TraM recognition site|Type IV secretion system coupling protein TraD, DNA-binding domain G3DSA:3.40.50.300|PF10412|PF12696|SSF52540|TIGR03743|TIGR03754 MEALZ_RS10270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|SSF55811 MEALZ_RS10275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR39550|PTHR39550:SF1 MEALZ_RS10290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 MEALZ_RS10305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014914 RES domain PF08808|SM00953 MEALZ_RS10310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011979|IPR024467 Conserved hypothetical protein CHP02293|Domain of unknown function DUF2384 PF09722|TIGR02293 MEALZ_RS10315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|PTHR33988|PTHR33988:SF2|SSF50118 MEALZ_RS10325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000253|IPR002035|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain|von Willebrand factor, type A GO:0005515 G3DSA:2.60.200.20|G3DSA:3.40.50.410|PF00092|PF00498|SM00240|SM00327|SSF49879|SSF53300 MEALZ_RS10330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:1.20.120.20 MEALZ_RS10335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000253|IPR001940|IPR008984|IPR009003 Forkhead-associated (FHA) domain|Peptidase S1, PA clan|Peptidase S1C|SMAD/FHA domain GO:0004252|GO:0005515|GO:0006508 G3DSA:2.40.10.10|G3DSA:2.60.200.20|PF00498|PF13365|PR00834|PTHR22939|PTHR22939:SF79|SM00240|SSF49879|SSF50494 MEALZ_RS10340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF13672|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606 MEALZ_RS10350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 MEALZ_RS10355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF13672|PTHR13832|PTHR13832:SF226|SM00331|SM00332|SSF81606 MEALZ_RS10360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011460 Protein of unknown function DUF1566 PF07603 MEALZ_RS10365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS10370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 MEALZ_RS10380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 MEALZ_RS10385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR002850|IPR029060 PIN domain|PIN domain-like|PIN family, putative toxin-antitoxin system toxin component PF13470|PTHR34610|PTHR34610:SF2|SSF88723|TIGR00305 MEALZ_RS10390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 MEALZ_RS10395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR013321|IPR022789 Antitoxin ParD|Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|PF03693|SSF47598 MEALZ_RS10415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 MEALZ_RS10420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022293 Integrating conjugative element protein, PFL4693 TIGR03759 MEALZ_RS10435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS10440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS10450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006118|IPR006119|IPR009057 Homeodomain-like|Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PS00397|PTHR30461|PTHR30461:SF9|SM00857|SSF53041 MEALZ_RS10455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002513|IPR025296 Domain of unknown function DUF4158|Tn3 transposase DDE domain GO:0004803|GO:0006313 PF01526|PF13700 MEALZ_RS10465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 MEALZ_RS10475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|PTHR23305|SSF52540|SSF81271|TIGR00092 MEALZ_RS10485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006222|IPR013977|IPR017703 Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|YgfZ/GcvT conserved site G3DSA:3.30.70.1400|PF01571|PF08669|PTHR22602|PTHR22602:SF0|SSF103025|TIGR03317 MEALZ_RS10490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF2|SSF109604 MEALZ_RS10495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 PF02628|PTHR35457|PTHR35457:SF1 MEALZ_RS10500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002125|IPR016193 Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270 G3DSA:3.40.140.10|PF00383|PTHR11079|PTHR11079:SF63|SSF53927 MEALZ_RS10505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PR00455|PTHR30055|SSF46689|SSF48498 MEALZ_RS10510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30158|PTHR30158:SF2|SSF111369|TIGR01730 MEALZ_RS10515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF11|SSF82693|SSF82714|SSF82866|TIGR00915 MEALZ_RS10520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF13|SSF56954|TIGR01845 MEALZ_RS10530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003812|IPR011204 Fido domain|Virulence protein RhuM-like G3DSA:1.10.3290.10|PF02661|PF13310|PTHR35810|PTHR35810:SF2|SSF140931 MEALZ_RS10535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029060 PIN domain-like G3DSA:3.40.50.1010|SSF88723 MEALZ_RS10540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019239 Bacterial antitoxin of type II TA system, VapB PF09957 MEALZ_RS10550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR019199|IPR021127 CRISPR-associated endonuclease Cas2|Translation elongation factor EFG, V domain|Virulence-associated protein D / CRISPR associated protein Cas2 GO:0004521|GO:0043571 G3DSA:3.30.70.240|MF_01471|PF09827|PIRSF032582|PTHR34405|PTHR34405:SF1|SSF143430|TIGR01573 MEALZ_RS10555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002729|IPR019856 CRISPR-associated protein Cas1|CRISPR-associated protein Cas1, DVULG subtype MF_01470|PF01867|PTHR34353|PTHR34353:SF2|TIGR00287|TIGR03640 MEALZ_RS10560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013343|IPR022765 CRISPR-associated protein Cas4|Dna2/Cas4, domain of unknown function DUF83 PF01930|PTHR36531|PTHR36531:SF2|TIGR00372 MEALZ_RS10565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006482|IPR013418 CRISPR-associated protein Cas7, subtype I-B/I-C|CRISPR-associated protein Csd2 PF05107|TIGR01595|TIGR02589 MEALZ_RS10570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010144 CRISPR-associated protein, Csd1-type PF09709|TIGR01863 MEALZ_RS10575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010155|IPR013422|IPR021124 CRISPR pre-crRNA endoribonuclease Cas5d|CRISPR-associated protein Cas5, N-terminal|CRISPR-associated protein, Cas5 GO:0004519|GO:0043571|GO:0051607 PF09704|PIRSF029950|TIGR01876|TIGR02593 MEALZ_RS10580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006474|IPR006483|IPR006674|IPR011545|IPR027417 CRISPR-associated Cas3-HD domain|DEAD/DEAH box helicase domain|HD domain|Helicase Cas3, CRISPR-associated, core|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:1.10.3210.10|G3DSA:3.40.50.300|PF00270|PF01966|SSF109604|SSF52540|TIGR01587|TIGR01596 MEALZ_RS10585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000123|IPR000477|IPR013597|IPR030931 Group II intron reverse transcriptase/maturase|Group II intron, maturase-specific|RNA-directed DNA polymerase (reverse transcriptase), msDNA|Reverse transcriptase domain GO:0003723|GO:0003964|GO:0006278 PF00078|PF08388|PR00866|PTHR19446|PTHR19446:SF107|SSF56672|TIGR04416 MEALZ_RS10605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR003959|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF00004|PTHR23073|PTHR23073:SF24|SM00382|SSF52540 MEALZ_RS10615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025295 Domain of unknown function DUF4157 PF13699 MEALZ_RS10645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007048 GpW/Gp25/anti-adapter protein IraD G3DSA:3.10.450.40|PF04965|PTHR35862|PTHR35862:SF2|SSF160719 MEALZ_RS10650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008727 PAAR motif PF05488 MEALZ_RS10655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006531|IPR006533 Gp5 N-terminal|Type VI secretion system, RhsGE-associated Vgr protein G3DSA:2.40.50.230|PF05954|SSF69255|SSF69279|TIGR01646 MEALZ_RS10670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010667|IPR011747 Bacteriophage T4, Gp19, tail tube|Conserved hypothetical protein CHP02241 GO:0005198 PF06841|PTHR38009|PTHR38009:SF1|TIGR02241 MEALZ_RS10675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010667|IPR011747 Bacteriophage T4, Gp19, tail tube|Conserved hypothetical protein CHP02241 GO:0005198 PF06841|PTHR38009|PTHR38009:SF1|TIGR02241 MEALZ_RS10680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007067 Tail sheath protein PF04984|PTHR35861|PTHR35861:SF1 MEALZ_RS10690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025351 Protein of unknown function DUF4255 PF14065 MEALZ_RS10695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007390 Sporulation stage V, protein R PF04293|PTHR30029|PTHR30029:SF2 MEALZ_RS10700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035|IPR006698 Uncharacterised protein family UPF0229|von Willebrand factor, type A MF_01232|PF04285|PTHR30510|SSF53300 MEALZ_RS10705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010650|IPR013153|IPR016230|IPR027417 P-loop containing nucleoside triphosphate hydrolase|PrkA AAA domain|PrkA C-terminal domain|Serine-protein kinase, PrkA GO:0004672 G3DSA:3.40.50.300|PF06798|PF08298|PIRSF000549|PTHR30267|PTHR30267:SF2|SM00763|SSF52540 MEALZ_RS10710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003829|IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|Pirin, N-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF02678|PF05726|PIRSF006232|PTHR13903|PTHR13903:SF12|SSF51182 MEALZ_RS10715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005119 LysR, substrate-binding G3DSA:3.40.190.10|PF03466|PTHR30537|PTHR30537:SF29|SSF53850 MEALZ_RS10725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|SSF50494 MEALZ_RS10730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|SM00382|SM00448|SSF46689|SSF52172|SSF52540 MEALZ_RS10735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|PTHR21666|SSF53955 MEALZ_RS10740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021320 Protein of unknown function DUF2905 PF11146 MEALZ_RS10745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR014710|IPR018488|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF00027|PS00888|SM00100|SSF51206 MEALZ_RS10765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004027|IPR011978|IPR032710 NTF2-like domain|SEC-C motif|Uncharacterised protein family UPF0149 G3DSA:3.10.450.50|PF02810|PF03695|SSF101327|SSF103642|TIGR02292 MEALZ_RS10770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005532|IPR016187|IPR017806|IPR024775 C-type lectin fold|DinB-like domain|Ergothioneine biosynthesis protein EgtB|Sulfatase-modifying factor enzyme GO:0052699 G3DSA:3.90.1580.10|PF03781|PF12867|PTHR23150|PTHR23150:SF24|SSF109854|SSF56436|TIGR03440 MEALZ_RS10775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017804|IPR019257|IPR029063 Histidine-specific methyltransferase, SAM-dependent|Methyltransferase EgtD-like|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF10017|PIRSF018005|PTHR30468|PTHR30468:SF6|SSF53335|TIGR03438 MEALZ_RS10780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007361 Domain of unknown function DUF427 PF04248|PTHR34310|PTHR34310:SF1 MEALZ_RS10785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000674|IPR008274|IPR012368|IPR019546 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Oxidoreductase molybdopterin-binding subunit, IorB-related|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016491|GO:0055114 G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF02738|PIRSF036389|PTHR11908|PTHR11908:SF2|SM01008|SSF56003|TIGR01409 MEALZ_RS10790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001041|IPR002888|IPR006058|IPR012675 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|PF00111|PF01799|PS00197|PTHR11908|PTHR11908:SF82|SSF47741|SSF54292 MEALZ_RS10795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|PTHR19136|PTHR19136:SF78|SSF53448 MEALZ_RS10800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003777|IPR016040|IPR027051 NAD(P)-binding domain|XdhC Rossmann domain|XdhC- CoxI G3DSA:3.40.50.720|PF02625|PF13478|PTHR30388|PTHR30388:SF4|SSF51735 MEALZ_RS10805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|PTHR33202|PTHR33202:SF6|SSF46785 MEALZ_RS10810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022488|IPR022489|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polyphosphate kinase-2-related|Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 G3DSA:3.40.50.300|PF03976|PTHR34383|PTHR34383:SF3|SSF52540|TIGR03708 MEALZ_RS10815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|PTHR10434|PTHR10434:SF8|SM00563|SSF69593 MEALZ_RS10820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|PF13444|PTHR37323|PTHR37323:SF1|SSF55729 MEALZ_RS10825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR029787 GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00086|SM00091|SM00267|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS10830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819|PTHR11819:SF7|TIGR00813 MEALZ_RS10835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011727 Conserved hypothetical protein CHP02117 PF09601 MEALZ_RS10840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016040|IPR028971 NAD(P)-binding domain|NAD-glutamate dehydrogenase GO:0004352|GO:0019551 G3DSA:3.40.50.720|PF05088|PTHR11606|PTHR11606:SF1|SSF51735|SSF53223 MEALZ_RS10845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594 Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|PF13581|PTHR35526|PTHR35526:SF1|SSF55874 MEALZ_RS10850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|PTHR33495|PTHR33495:SF3|SSF52091|TIGR00377 MEALZ_RS10855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003370|IPR014047 Chromate transporter|Chromate transporter, long chain GO:0015109|GO:0015703 PF02417|PIRSF004810|PTHR33567|PTHR33567:SF1|TIGR00937 MEALZ_RS10860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|PTHR21666|SSF54001 MEALZ_RS10865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027379 Cardiolipin synthase N-terminal PF13396 MEALZ_RS10875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.2060.10|G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|PTHR14025|PTHR14025:SF21|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 MEALZ_RS10880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004193|IPR006047|IPR012768|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853|IPR022567 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, C-terminal (DUF3459)|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold|Malto-oligosyltrehalose trehalohydrolase GO:0003824|GO:0004553|GO:0005975|GO:0005992 G3DSA:2.60.40.10|G3DSA:3.20.20.80|PF00128|PF02922|PF11941|PIRSF006337|PTHR10357|PTHR10357:SF110|SM00642|SSF51445|SSF81296|TIGR02402 MEALZ_RS10885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR012767|IPR013781|IPR013797|IPR015902|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, family 13, catalytic domain|Malto-oligosyltrehalose synthase|Maltooligosyl trehalose synthase, N-terminal GO:0003824|GO:0005975 G3DSA:1.10.10.470|G3DSA:1.10.150.200|G3DSA:3.20.20.80|G3DSA:3.30.1590.10|PF00128|PTHR10357|PTHR10357:SF166|SM00642|SSF51445|TIGR02401 MEALZ_RS10890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003416|IPR025105 Domain of unknown function DUF4010|MgtC/SapB/SrpB/YhiD family GO:0016020 PF02308|PF13194|PTHR39084 MEALZ_RS10895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004360|IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain G3DSA:3.10.180.10|PF00903|PTHR21366|PTHR21366:SF4|SSF54593 MEALZ_RS10920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012337|IPR013520|IPR013620|IPR023607 Exodeoxyribonuclease I|Exonuclease C-terminal|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0004529|GO:0006281|GO:0008852 G3DSA:3.30.420.10|PF00929|PF08411|PIRSF000977|PTHR11046|PTHR11046:SF2|SSF53098 MEALZ_RS10925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 MEALZ_RS10930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007495 (Na+)-NQR maturation factor NqrM PF04400 MEALZ_RS10935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003374|IPR024932 ApbE-like domain|Flavin transferase ApbE GO:0017013 PF02424|PIRSF006268|PTHR30040|PTHR30040:SF3|SSF143631 MEALZ_RS10940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001041|IPR001433|IPR001709|IPR008333|IPR010205|IPR012675|IPR017938 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Flavoprotein pyridine nucleotide cytochrome reductase|Na(+)-translocating NADH-quinone reductase subunit F|Oxidoreductase FAD/NAD(P)-binding|Oxidoreductase, FAD-binding domain|Riboflavin synthase-like beta-barrel GO:0006814|GO:0009055|GO:0016021|GO:0016491|GO:0016655|GO:0051536|GO:0051537|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.10.20.30|G3DSA:3.40.50.80|MF_00430|PF00111|PF00175|PF00970|PIRSF000044|PR00371|PTHR19370|PTHR19370:SF32|SSF52343|SSF54292|SSF63380|TIGR01941 MEALZ_RS10945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003667|IPR010967 Na(+)-translocating NADH-quinone reductase subunit E|Rnf-Nqr subunit, membrane protein GO:0009276|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00429|PF02508|PIRSF006102|PTHR30335|PTHR30335:SF1|TIGR01940 MEALZ_RS10950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003667|IPR011292 Na(+)-translocating NADH-quinone reductase subunit D|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0016655|GO:0055114 MF_00428|PF02508|PIRSF006102|PTHR30586|PTHR30586:SF1|TIGR01939 MEALZ_RS10955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007329|IPR010204 FMN-binding|Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0055114 MF_00427|PF04205|PIRSF009437|PTHR37838|PTHR37838:SF1|SM00900|TIGR01938 MEALZ_RS10960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004338|IPR010966 NADH-quinone reductase NQR2/RnfD|Na(+)-translocating NADH-quinone reductase subunit B GO:0006810|GO:0009276|GO:0010181|GO:0016020|GO:0016021|GO:0016655|GO:0022904|GO:0055114 MF_00426|PF03116|PIRSF016055|PTHR30578|PTHR30578:SF1|TIGR01937 MEALZ_RS10965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008703|IPR022615 Na(+)-translocating NADH-quinone reductase subunit A|Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0006814|GO:0016655|GO:0055114 MF_00425|PF05896|PF11973|PTHR37839|PTHR37839:SF1|TIGR01936 MEALZ_RS10970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003473|IPR023515 Quinolinate synthase A, type 3|Quinolinate synthetase A GO:0008987|GO:0009435|GO:0016765|GO:0051539 MF_00569|PF02445|PTHR30573|PTHR30573:SF0|SSF142754|TIGR00550 MEALZ_RS10975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR018150|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Aspartate-tRNA ligase, bacterial/mitochondrial-type|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.1360.30|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|PTHR22594|PTHR22594:SF5|SSF50249|SSF55261|SSF55681|TIGR00459 MEALZ_RS10980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004039|IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain|Rubredoxin-type fold G3DSA:2.20.28.10|PF09723|PTHR34404|PTHR34404:SF2|SM00834|TIGR02605 MEALZ_RS10985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002195|IPR004721|IPR006680|IPR032466 Amidohydrolase-related|Dihydroorotase homodimeric type|Dihydroorotase, conserved site|Metal-dependent hydrolase GO:0004151|GO:0016787|GO:0016812|GO:0019856 G3DSA:3.20.20.140|PF01979|PIRSF001237|PS00482|PS00483|PTHR11647|PTHR11647:SF59|SSF51556|TIGR00856 MEALZ_RS10990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 MEALZ_RS11000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001048 Aspartate/glutamate/uridylate kinase G3DSA:3.40.1160.10|PF00696|SSF53633 MEALZ_RS11005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005801|IPR005802|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal|Para-aminobenzoate synthase, component I GO:0009058|GO:0009396|GO:0016833 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|PTHR11236|SSF56322|TIGR00553 MEALZ_RS11010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001406|IPR020094|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, N-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|PTHR11142|PTHR11142:SF0|SSF55120|TIGR00071 MEALZ_RS11015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005490 L,D-transpeptidase catalytic domain GO:0016740 G3DSA:2.40.440.10|PF03734|PTHR30582|SSF141523 MEALZ_RS11020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012912|IPR024047 Plasmid pRiA4b, Orf3|Protein MM3350-like domain G3DSA:3.10.290.30|PF07929|PTHR41878|PTHR41878:SF1|SSF159941 MEALZ_RS11025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001566|IPR010280|IPR012340|IPR029063|IPR030390|IPR030391 (Uracil-5)-methyltransferase family|23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD|Nucleic acid-binding, OB-fold|RNA methyltransferase TrmA, active site|RNA methyltransferase TrmA, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003723|GO:0006396|GO:0008173 G3DSA:2.40.50.140|G3DSA:3.40.50.150|MF_01010|PF05958|PS01230|PS01231|PTHR11061|PTHR11061:SF30|SSF50249|SSF53335|TIGR00479 MEALZ_RS11030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008309 Uncharacterised conserved protein UCP025560 PF07027 MEALZ_RS11040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001216|IPR001926|IPR005856|IPR005858 Cysteine synthase|Cysteine synthase CysM|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|PTHR10314|PTHR10314:SF100|SSF53686|TIGR01136|TIGR01138 MEALZ_RS11045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358|IPR029016 GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.190.10|PF00512|PF02518|PF12974|PR00344|PTHR24423|SM00387|SM00388|SSF47384|SSF53850|SSF55781|SSF55874 MEALZ_RS11050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR011006|IPR013656|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-4|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF08448|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00086|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS11055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF686|SM00267|SSF55073|TIGR00254 MEALZ_RS11065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis G3DSA:3.30.420.130|PF02579|PTHR33937|SSF53146 MEALZ_RS11070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004852|IPR009056|IPR012286|IPR025992 Cytochrome c-like domain|Di-haem cytochrome c peroxidase|Haem-binding domain|Tetrahaem cytochrome domain GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.1130.10|G3DSA:1.10.760.10|PF00034|PF03150|PF14376|PTHR30600|PTHR30600:SF7|SM01235|SSF46626 MEALZ_RS11075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000043|IPR020082 Adenosylhomocysteinase|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 G3DSA:3.40.50.1480|PF05221|PS00738|PTHR23420|SSF52283 MEALZ_RS11080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF305|SM00382|SSF52540 MEALZ_RS11085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008778|IPR011051|IPR012093|IPR014710 Pirin|Pirin, C-terminal domain|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05726|PTHR13903|SSF51182 MEALZ_RS11090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024442|IPR024445 ISXO2-like transposase domain|Transposase, zinc-ribbon PF12760|PF12762|SM01126 MEALZ_RS11095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|SSF56235 MEALZ_RS11100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF46689|SSF53098 MEALZ_RS11105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 MEALZ_RS11110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000209|IPR015500|IPR022398|IPR023827|IPR023828 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PR00723|PS00136|PS00137|PS00138|PTHR10795|PTHR10795:SF419|SSF52743 MEALZ_RS11120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain PF01610|PF13542|PTHR33498|PTHR33498:SF1 MEALZ_RS11130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF00106|PR00081|PTHR24320|PTHR24320:SF70|SM00822|SSF51735 MEALZ_RS11135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF834|SSF53335 MEALZ_RS11140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009078|IPR012347|IPR019243 Domain of unknown function DUF2202|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF09968|SSF47240 MEALZ_RS11145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 PF02535|PTHR16950 MEALZ_RS11150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR027417 ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|PTHR24220:SF85|SSF52540 MEALZ_RS11155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00702|PR00119|PS00154|PTHR24093|PTHR24093:SF50|SSF56784|SSF81653|TIGR01494|TIGR01512|TIGR01525 MEALZ_RS11160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003373|IPR006073|IPR007167|IPR008988|IPR011619|IPR011640|IPR011642|IPR027417 Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Ferrous iron transport protein B, N-terminal|Ferrous iron transporter FeoA domain|GTP binding domain|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase|Transcriptional repressor, C-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021|GO:0046914 G3DSA:3.40.50.300|PF02421|PF04023|PF07664|PF07670|PR00326|PTHR11649|PTHR11649:SF37|SM00899|SSF50037|SSF52540|TIGR00437 MEALZ_RS11165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763|IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Rhodanese-like domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.40.250.10|G3DSA:3.50.50.60|PF00581|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF140|SM00450|SSF51905|SSF52821|SSF55424 MEALZ_RS11170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13379|PTHR30024|PTHR30024:SF7|SSF53850 MEALZ_RS11175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30151|PTHR30151:SF7|SSF161098 MEALZ_RS11180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005890|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Nitrate transport ATP-binding subunit C/D|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015112|GO:0015706|GO:0016020|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF457|SM00382|SSF52540|TIGR01184 MEALZ_RS11185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025388 Alginate export domain PF13372 MEALZ_RS11190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF1|SSF51905 MEALZ_RS11195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006656|IPR006657|IPR006963|IPR007419|IPR009010|IPR027467 Aspartate decarboxylase-like domain|BFD-like [2Fe-2S]-binding domain|Molybdopterin dinucleotide-binding domain|Molybdopterin oxidoreductase|Molybdopterin oxidoreductase, 4Fe-4S domain|Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0016491|GO:0030151|GO:0051539|GO:0055114 G3DSA:2.20.25.90|G3DSA:2.40.40.20|G3DSA:3.40.228.10|G3DSA:3.40.50.740|PF00384|PF01568|PF04324|PF04879|PS00551|PTHR11615|PTHR11615:SF119|SM00926|SSF50692|SSF53706 MEALZ_RS11200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000026|IPR016191 Guanine-specific ribonuclease N1/T1/U2|Ribonuclease/ribotoxin GO:0003723|GO:0004521|GO:0004540 G3DSA:3.10.450.30|PF00545|SSF53933 MEALZ_RS11205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000468 Barstar (barnase inhibitor) G3DSA:3.30.370.10|PF01337|SSF52038 MEALZ_RS11210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000212|IPR013986|IPR014016|IPR014017|IPR027417 DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|PF00580|PF13361|PTHR11070|PTHR11070:SF7|SSF52540 MEALZ_RS11215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 MEALZ_RS11220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007313 FxsA cytoplasmic membrane protein GO:0016020 PF04186|PTHR35335|PTHR35335:SF1 MEALZ_RS11225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004323|IPR011322 Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta GO:0010038 G3DSA:3.30.70.830|PF03091|PTHR23419|SSF54913 MEALZ_RS11230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003834|IPR012336|IPR017937|IPR022910|IPR028250 Cytochrome C biogenesis protein, transmembrane domain|Thiol:disulfide interchange protein DsbD, N-terminal domain|Thiol:disulphide interchange protein DsbD|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016020|GO:0017004|GO:0045454|GO:0047134|GO:0055114 G3DSA:2.60.40.1250|G3DSA:3.40.30.10|MF_00399|PF02683|PF11412|PF13899|PS00194|PTHR32234|PTHR32234:SF0|SSF52833|SSF74863 MEALZ_RS11235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336|IPR017937 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin, conserved site|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0045454|GO:0055114 G3DSA:3.40.30.10|PF00578|PS00194|PTHR10681|PTHR10681:SF125|SSF52833 MEALZ_RS11240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001874|IPR018509 Dehydroquinase, class II|Dehydroquinase, class II, conserved site GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|PS01029|PTHR21272|SSF52304|TIGR01088 MEALZ_RS11245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000089|IPR001249|IPR011053|IPR018303 Acetyl-CoA biotin carboxyl carrier|Biotin/lipoyl attachment|P-type ATPase, phosphorylation site|Single hybrid motif GO:0003989|GO:0006633|GO:0009317 G3DSA:2.40.50.100|PF00364|PR01071|PS00154|PTHR23151|SSF51230|TIGR00531 MEALZ_RS11250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 MEALZ_RS11255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004498|IPR029063 Ribosomal protein L11 methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0006479|GO:0008276 G3DSA:3.40.50.150|MF_00735|PF06325|PIRSF000401|PTHR18895|PTHR18895:SF69|SSF53335|TIGR00406 MEALZ_RS11260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011723|IPR021834 Protein of unknown function DUF3426|Zinc finger/thioredoxin putative PF11906|TIGR02098 MEALZ_RS11265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015947|IPR019614|IPR029063 PUA-like domain|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosylmethionine-dependent methyltransferase GO:0008168 G3DSA:2.30.130.10|G3DSA:3.30.750.80|G3DSA:3.40.50.150|PF10672|PTHR11061|PTHR11061:SF12|SSF53335|SSF88697 MEALZ_RS11280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001269|IPR004652|IPR013785|IPR018517|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, TIM-barrel, NifR3|tRNA-dihydrouridine synthase, conserved site|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|PS01136|PTHR11082|PTHR11082:SF25|SSF51395|TIGR00737 MEALZ_RS11285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002197|IPR005412|IPR009057 DNA binding HTH domain, Fis-type|DNA-binding protein Fis|Homeodomain-like GO:0003677|GO:0006355|GO:0043565 G3DSA:1.10.10.60|PF02954|PIRSF002097|PR01590|PR01591|PTHR32071|SSF46689 MEALZ_RS11290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002695|IPR011607|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like|Methylglyoxal synthase-like domain GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|G3DSA:3.40.50.1380|MF_00139|PF01808|PF02142|PIRSF000414|PTHR11692|PTHR11692:SF2|SM00798|SM00851|SSF52335|SSF53927|TIGR00355 MEALZ_RS11295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000115|IPR011054|IPR013815|IPR013816|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|PTHR10520|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 MEALZ_RS11300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838|IPR004513 ABC transporter permease protein domain|Cell division protein FtsX GO:0007049|GO:0016020|GO:0016021 PF02687|PIRSF003097 MEALZ_RS11305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005286|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Cell division protein FtsE, ATP-binding|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887|GO:0051301 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF470|SM00382|SSF52540|TIGR02673 MEALZ_RS11310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000897|IPR003593|IPR003780|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|COX15/CtaA family|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614|GO:0006784|GO:0016021|GO:0016627|GO:0055114 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02628|PF02881|PS00300|PTHR11564|PTHR11564:SF16|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 MEALZ_RS11315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|SSF52833 MEALZ_RS11320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002994 Surfeit locus 1/Shy1 GO:0016020 PF02104 MEALZ_RS11325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021313 Protein of unknown function DUF2909 PF11137 MEALZ_RS11330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000298|IPR013833|IPR024791 Cytochrome c oxidase subunit III|Cytochrome c oxidase subunit III domain|Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0015002|GO:0016020|GO:0019646|GO:0022904 G3DSA:1.10.287.70|G3DSA:1.20.120.80|PF00510|PTHR11403|PTHR11403:SF0|SSF81452 MEALZ_RS11335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007533|IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11|Cytochrome c oxidase assembly protein CtaG/Cox11, domain GO:0005507 G3DSA:2.60.370.10|PF04442|PIRSF005413|PTHR21320|PTHR21320:SF3|SSF110111 MEALZ_RS11340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000883|IPR014241|IPR023615|IPR023616 Cytochrome c oxidase subunit I|Cytochrome c oxidase, subunit I bacterial type|Cytochrome c oxidase, subunit I domain|Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0005506|GO:0005507|GO:0005886|GO:0006810|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0022900|GO:0055114 G3DSA:1.20.210.10|PF00115|PR01165|PS00077|PTHR10422|PTHR10422:SF27|SSF81442|TIGR02891 MEALZ_RS11345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001505|IPR002429|IPR008972|IPR009056|IPR011759|IPR014222 Copper centre Cu(A)|Cupredoxin|Cytochrome C oxidase subunit II, transmembrane domain|Cytochrome c oxidase subunit II C-terminal|Cytochrome c oxidase, subunit II|Cytochrome c-like domain GO:0004129|GO:0005507|GO:0009055|GO:0016020|GO:0016021|GO:0016491|GO:0020037|GO:0022900 G3DSA:1.10.287.90|G3DSA:1.10.760.10|G3DSA:2.60.40.420|PF00116|PF02790|PF13442|PR01166|PS00078|PTHR22888|PTHR22888:SF2|SSF46626|SSF49503|SSF81464|TIGR02866 MEALZ_RS11350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012312|IPR012827|IPR016131 Haemerythrin, iron-binding site|Haemerythrin, metal-binding domain|Haemerythrin-like GO:0046872 G3DSA:1.20.120.50|PF01814|PS00550|PTHR37164|SSF47188|TIGR02481 MEALZ_RS11355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004472|IPR027417 Dethiobiotin synthase BioD|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0004141|GO:0005524|GO:0009102 G3DSA:3.40.50.300|MF_00336|PF13500|PIRSF006755|PTHR21343|PTHR21343:SF13|SSF52540|TIGR00347 MEALZ_RS11360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011814|IPR013216|IPR029063 Malonyl-[acyl-carrier protein] O-methyltransferase BioC|Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168|GO:0009102|GO:0010340 G3DSA:3.40.50.150|MF_00835|PF08241|PTHR10108|PTHR10108:SF855|SSF53335|TIGR02072 MEALZ_RS11365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR010076|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 G3DSA:3.40.50.1820|MF_01260|PF00561|PTHR10992|PTHR10992:SF812|SSF53474|TIGR01738 MEALZ_RS11370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001917|IPR004723|IPR004839|IPR015421|IPR015422|IPR015424|IPR022834 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type|8-amino-7-oxononanoate synthase, Proteobacteria|Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008152|GO:0008710|GO:0009058|GO:0009102|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01693|PF00155|PS00599|PTHR13693|PTHR13693:SF53|SSF53383|TIGR00858 MEALZ_RS11375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|PTHR22976|PTHR22976:SF1|SM00729|SM00876|SSF102114|TIGR00433 MEALZ_RS11380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR11907|PTHR11907:SF9|SSF53271 MEALZ_RS11385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR008533|IPR027417 AAA+ ATPase domain|Domain of unknown function DUF815|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF05673|PTHR13779|PTHR13779:SF28|SM00382|SSF52540 MEALZ_RS11390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001623 DnaJ domain G3DSA:1.10.287.110|SSF46565 MEALZ_RS11400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005888|IPR016040 NAD(P)-binding domain|dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF41|SSF51735|TIGR01181 MEALZ_RS11405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000412|IPR013525|IPR022403 ABC-2 transporter|ABC-2 type transporter|Alcohol ABC transporter, permease protein GO:0006810|GO:0016020 PF01061|PIRSF006648|PTHR30294|PTHR30294:SF13|TIGR03861 MEALZ_RS11410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR022467|IPR027417 AAA+ ATPase domain|ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PTHR24220|SM00382|SSF52540|TIGR03864 MEALZ_RS11415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011045|IPR011964|IPR015943|IPR019405|IPR022456 Lactonase, 7-bladed beta propeller|Nitrous oxide reductase, N-terminal|PQQ-dependent catabolism-associated beta-propeller protein|WD40/YVTN repeat-like-containing domain|YVTN beta-propeller repeat GO:0005515 G3DSA:2.130.10.10|PF10282|PTHR13833|SSF50974|TIGR02276|TIGR03866 MEALZ_RS11420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022478|IPR028082 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system|Periplasmic binding protein-like I G3DSA:3.40.50.2300|SSF53822|TIGR03863 MEALZ_RS11425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 MEALZ_RS11440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005302|IPR005303|IPR011037 MOSC, N-terminal beta barrel|Molybdenum cofactor sulfurase, C-terminal|Pyruvate kinase-like, insert domain GO:0003824|GO:0030151|GO:0030170 PF03473|PF03476|PTHR14237|PTHR14237:SF30|SSF141673|SSF50800 MEALZ_RS11445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 PF02690|PTHR10010|PTHR10010:SF26 MEALZ_RS11465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000924|IPR001412|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Aminoacyl-tRNA synthetase, class I, conserved site|Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_00126|PF00749|PF03950|PR00987|PS00178|PTHR11451|PTHR11451:SF29|SSF50715|SSF52374|TIGR00440 MEALZ_RS11470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR006189|IPR013655|IPR013767|IPR029016|IPR029787 CHASE domain|EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold|PAS fold-3 GO:0005515|GO:0006355 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00989|PF00990|PF03924|PF08447|PF13185|PF13188|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00065|SM00086|SM00091|SM00267|SM01079|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 MEALZ_RS11475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004549|IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Acetyl-CoA carboxylase, biotin carboxylase|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524|GO:0016874 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00866|PS00867|PTHR18866|SM00878|SSF51246|SSF52440|SSF56059|TIGR00514 MEALZ_RS11480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000089|IPR000891|IPR003379|IPR005776|IPR009057|IPR011053|IPR013785 Aldolase-type TIM barrel|Biotin/lipoyl attachment|Carboxylase, conserved domain|Homeodomain-like|Oxaloacetate decarboxylase, alpha subunit|Pyruvate carboxyltransferase|Single hybrid motif GO:0003677|GO:0003824|GO:0006814|GO:0008948 G3DSA:1.10.10.60|G3DSA:2.40.50.100|G3DSA:3.20.20.70|PF00364|PF00682|PF02436|PTHR18866|PTHR18866:SF109|SSF51230|SSF51569|SSF89000|TIGR01108 MEALZ_RS11485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005145|IPR006070|IPR010923|IPR017945 DHBP synthase RibB-like alpha/beta domain|Putative GTP-binding controlling metal-binding domain|YrdC-like domain|tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 GO:0003725 G3DSA:3.90.870.10|PF01300|PF03481|PIRSF004930|PTHR17490|PTHR17490:SF3|SSF55821|TIGR00057 MEALZ_RS11490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002505|IPR004614|IPR010766|IPR016475|IPR027417|IPR028979 DRTGG|HPr(Ser) kinase/phosphorylase, N-terminal domain-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate acetyl/butaryl transferase|Phosphate acetyltransferase|Phosphate acetyltransferase, bacteria GO:0008152|GO:0008959|GO:0016407|GO:0016746 G3DSA:3.40.1390.20|G3DSA:3.40.50.10750|PF01515|PF07085|PF13500|PIRSF006107|PTHR23406|PTHR23406:SF3|SSF52540|SSF53659|SSF75138|TIGR00651 MEALZ_RS11495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF3|SSF56954|TIGR01844 MEALZ_RS11505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF16|SSF82693|SSF82714|SSF82866 MEALZ_RS11510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF15|SSF111369|TIGR01730 MEALZ_RS11515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712|IPR009614 Toxin YoeB|Toxin-antitoxin system, RelE/ParE toxin family GO:0004519|GO:0006401 PF06769|SSF143011|TIGR02385 MEALZ_RS11520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 MEALZ_RS11530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002477|IPR024408 Domain of unknown function DUF3380|Peptidoglycan binding-like G3DSA:1.10.101.10|G3DSA:1.10.530.10|PF01471|PF11860|SSF47090 MEALZ_RS11540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002641|IPR011990|IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase|Patatin/Phospholipase A2-related|Tetratricopeptide-like helical domain GO:0005515|GO:0006629|GO:0008152 G3DSA:1.25.40.10|G3DSA:3.40.1090.10|PF01734|SSF52151 MEALZ_RS11545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR025136 Domain of unknown function DUF4071|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13281|SSF48452 MEALZ_RS11555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018739 Domain of unknown function DUF2281 PF10047 MEALZ_RS11575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018891 Abortive bacteriophage infection, resistance PF10592 MEALZ_RS11580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS11585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS11610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001075|IPR002871|IPR007419|IPR010238|IPR016217|IPR017870 BFD-like [2Fe-2S]-binding domain|FeS cluster insertion, C-terminal, conserved site|NIF system FeS cluster assembly, NifU|NIF system FeS cluster assembly, NifU, C-terminal|NIF system FeS cluster assembly, NifU, N-terminal|Nitrogen fixation, NifU GO:0005506|GO:0016226|GO:0051536 G3DSA:3.90.1010.10|PD002830|PF01106|PF01592|PF04324|PIRSF000375|PS01152|PTHR10093|PTHR10093:SF1|SSF117916|SSF82649|TIGR02000 MEALZ_RS11615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 PF04319 MEALZ_RS11620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR004606|IPR005116|IPR008995|IPR011991|IPR016462 Molybdate-dependent transcriptional regulator ModE|Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|Transcription regulator HTH, LysR|Transport-associated OB, type 1|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355|GO:0006810|GO:0015689|GO:0030151 G3DSA:1.10.10.10|G3DSA:2.40.50.100|PF00126|PF03459|PIRSF005763|PTHR30432|SSF46785|SSF50331|TIGR00638 MEALZ_RS11625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025388 Alginate export domain PF13372 MEALZ_RS11630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR011991 Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF00126|PTHR30432|SSF46785 MEALZ_RS11635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|SSF53850|TIGR01256 MEALZ_RS11640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|PTHR30632|PTHR30632:SF0|SSF53850|TIGR01256 MEALZ_RS11645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|PTHR30183|SSF161098|TIGR02141 MEALZ_RS11650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005116|IPR008995|IPR011868|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Molybdate ABC transporter, ATP-binding protein|Molybdate/tungstate binding, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transport-associated OB, type 1 GO:0005524|GO:0015098|GO:0015689|GO:0016020|GO:0016887 G3DSA:2.40.50.100|G3DSA:3.40.50.300|PF00005|PF03459|PS00211|PTHR24220|PTHR24220:SF284|SM00382|SSF50331|SSF52540|TIGR02142 MEALZ_RS11655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|PTHR30522|PTHR30522:SF0|SSF101386|TIGR00444 MEALZ_RS11660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00583|PTHR10584|PTHR10584:SF15|SSF53613 MEALZ_RS11665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 G3DSA:1.10.3830.10|PF01219|PS01069|PTHR34299|PTHR34299:SF1 MEALZ_RS11670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002930|IPR003016|IPR011053|IPR017453 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|PTHR11715|SSF51230|TIGR00527 MEALZ_RS11680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF4|SSF82693|SSF82714|SSF82866 MEALZ_RS11690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001638|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR015168 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain|Solute-binding protein family 3/N-terminal domain of MltF|SsuA/THI5-like GO:0000155|GO:0000160|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.190.10|G3DSA:3.40.50.2300|PF00072|PF00497|PF00512|PF02518|PF08447|PF09084|PR00344|PTHR24423|PTHR24423:SF382|SM00062|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF53850|SSF55785|SSF55874 MEALZ_RS11695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|PTHR26402:SF495|SM00448|SM00471|SSF109604|SSF52172 MEALZ_RS11700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001638|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.190.10|PF00497|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00062|SM00086|SM00267|SSF141868|SSF53850|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS11705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR029063 Major facilitator superfamily domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF103473|SSF53335 MEALZ_RS11710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 G3DSA:2.40.230.20|PF16412|SSF111364 MEALZ_RS11715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PF03600|PTHR10283|PTHR10283:SF91 MEALZ_RS11725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006153|IPR018422 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR10110|PTHR10110:SF86 MEALZ_RS11735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006037|IPR006512 Regulator of K+ conductance, C-terminal|YidE/YbjL duplication GO:0006813|GO:0008324 G3DSA:3.30.70.1450|PF02080|PF06826|PTHR30445|PTHR30445:SF1|SSF116726|TIGR01625 MEALZ_RS11740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR10120|PTHR10120:SF19 MEALZ_RS11745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF145|SSF69572 MEALZ_RS11750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001130|IPR032466 Metal-dependent hydrolase|TatD family GO:0016788 G3DSA:3.20.20.140|PF01026|PIRSF005902|PTHR10060|SSF51556 MEALZ_RS11755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001216|IPR001926|IPR005856|IPR005859 Cysteine synthase|Cysteine synthase CysK|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|PTHR10314|PTHR10314:SF110|SSF53686|TIGR01136|TIGR01139 MEALZ_RS11760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001310|IPR011146|IPR019808 HIT-like domain|Histidine triad (HIT) protein|Histidine triad, conserved site GO:0003824 G3DSA:3.30.428.10|PF01230|PR00332|PS00892|PTHR23089|PTHR23089:SF2|SSF54197 MEALZ_RS11765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000093|IPR006171|IPR015967|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|Recombination protein RecR, conserved site|Toprim domain GO:0003677|GO:0006281|GO:0006310 MF_00017|PF02132|PF13662|PS01300|PTHR30446|PTHR30446:SF0|SM00493|SSF111304|TIGR00615 MEALZ_RS11770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|PTHR33449|PTHR33449:SF1|SSF82607|TIGR00103 MEALZ_RS11775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001270|IPR003593|IPR008921|IPR012763|IPR021029|IPR022754|IPR027417 AAA+ ATPase domain|ClpA/B family|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|DNA polymerase III, tau subunit, domain V|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF12170|PF13177|PR00300|PTHR11669|PTHR11669:SF0|SM00382|SSF48019|SSF52540|TIGR02397 MEALZ_RS11785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF496|SM00387|SSF47384|SSF55874 MEALZ_RS11790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SSF46894 MEALZ_RS11795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR023772 DNA-binding HTH domain, TetR-type|DNA-binding HTH domain, TetR-type, conserved site|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PF14246|PR00455|PS01081|PTHR30055|PTHR30055:SF76|SSF46689|SSF48498 MEALZ_RS11800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF4|SSF56954 MEALZ_RS11805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30469|PTHR30469:SF10|SSF111369|TIGR01730 MEALZ_RS11810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF18|SSF82693|SSF82714|SSF82866 MEALZ_RS11825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358|IPR013727 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Two-component sensor kinase, N-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PF08521|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 MEALZ_RS11830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF279|SM00448|SM00862|SSF46894|SSF52172 MEALZ_RS11835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001765|IPR015892 Carbonic anhydrase|Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 G3DSA:3.40.1050.10|PF00484|PS00704|PS00705|PTHR11002|PTHR11002:SF20|SM00947|SSF53056 MEALZ_RS11840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001902|IPR006015|IPR006016|IPR011547|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|SLC26A/SulP transporter|SLC26A/SulP transporter domain|Universal stress protein A|UspA GO:0006950|GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.40.50.620|PF00582|PF00916|PR01438|PTHR11814|PTHR11814:SF112|SSF52402 MEALZ_RS11845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00120|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 MEALZ_RS11850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004422|IPR006204|IPR014721|IPR020568 GHMP kinase N-terminal domain|GHMP kinase group 1|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524 G3DSA:3.30.230.10|PF00288|PIRSF004884|SSF54211|TIGR00144 MEALZ_RS11855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003806|IPR013816|IPR016677 ATP-grasp fold, DUF201-type|ATP-grasp fold, subdomain 2|Uncharacterised conserved protein UCP016817, ATP-dependent carboligase GO:0005524|GO:0046872 G3DSA:3.30.470.20|PF02655|PIRSF016817|SSF56059 MEALZ_RS11860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 G3DSA:3.10.340.11|G3DSA:3.30.1030.10|MF_00486|PF02289|SSF56199|TIGR03120 MEALZ_RS11865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004666|IPR013651|IPR013815|IPR013816|IPR016185 ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain|Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0003824|GO:0005524|GO:0006464 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF08443|PTHR21621|PTHR21621:SF0|SSF56059|TIGR00768 MEALZ_RS11870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 PF01874|PTHR42280|PTHR42280:SF1 MEALZ_RS11875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014826|IPR020568 Formaldehyde-activating enzyme|Ribosomal protein S5 domain 2-type fold GO:0016051|GO:0016840 G3DSA:3.30.230.60|PF08714|PTHR35039|PTHR35039:SF1|SSF54211|TIGR03126 MEALZ_RS11880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS11885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002692|IPR014395|IPR023343|IPR029055 Nucleophile aminohydrolases, N-terminal|Penicillin acylase|Penicillin amidase type, domain1|Penicillin/cephalosporin acylase GO:0016787|GO:0016811|GO:0017000 G3DSA:1.10.439.10|G3DSA:2.30.120.10|G3DSA:3.60.20.10|PF01804|PIRSF001227|PTHR34218|PTHR34218:SF2|SSF56235 MEALZ_RS11890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0008152 G3DSA:3.20.20.70|PF00977|SSF51366 MEALZ_RS11895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003806|IPR013816|IPR024710 ATP-grasp fold, DUF201-type|ATP-grasp fold, subdomain 2|Tyramine--L-glutamate ligase GO:0005524|GO:0046872 G3DSA:3.30.470.20|PF02655|PIRSF016766|SSF56059 MEALZ_RS11900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002756|IPR002821 4-[[4-(2-aminoethyl)phenoxy]-methyl]-2-furanmethanamine-glutamate synthase|Hydantoinase/oxoprolinase GO:0016787 G3DSA:3.30.420.190|G3DSA:3.30.420.40|PF01968|SSF53067|TIGR03123 MEALZ_RS11905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:3.40.50.2300 MEALZ_RS11910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|PTHR30511|PTHR30511:SF4|SM01005|SSF50621|SSF51419|TIGR00492 MEALZ_RS11915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 AAA+ ATPase domain|DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|PTHR30153|SM00382|SSF48024|SSF52540|TIGR00665 MEALZ_RS11920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002305|IPR002306|IPR014729|IPR024109 Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase|Tryptophan-tRNA ligase, bacterial-type GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|MF_00140_B|PF00579|PR01039|PTHR10055|PTHR10055:SF11|SSF52374|TIGR00233 MEALZ_RS11925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 MEALZ_RS11930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PIRSF006113|PTHR12589|SSF55620 MEALZ_RS11935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009659 Protein of unknown function DUF1249 PF06853|PTHR38774|PTHR38774:SF1 MEALZ_RS11940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015292|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|Transcription regulator YbiH, C-terminal GO:0003677 G3DSA:1.10.10.60|G3DSA:1.10.357.10|PF00440|PF09209|PR00455|PTHR30055|PTHR30055:SF73|SSF46689|SSF48498 MEALZ_RS11945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF3|SSF56954|TIGR01845 MEALZ_RS11950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF13437|PTHR30469|SSF111369|TIGR01730 MEALZ_RS11955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3850.10|G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF33|SSF82693|SSF82714|SSF82866 MEALZ_RS11960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|SSF52402 MEALZ_RS11965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008269|IPR014721|IPR020568|IPR027065|IPR027417 Lon protease|P-loop containing nucleoside triphosphate hydrolase|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF05362|PF13654|PR00830|PTHR10046|PTHR10046:SF46|SSF52540|SSF54211 MEALZ_RS11970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS11975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR003594|IPR011495|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-3|Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF07568|PF08447|PTHR24423|SSF55785|SSF55874|TIGR00229 MEALZ_RS11980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR005561|IPR008327|IPR011006|IPR011991 ANTAR domain|CheY-like superfamily|Signal transduction response regulator, antiterminator|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003723 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF03861|PIRSF036382|PTHR26402|SM00448|SM01012|SSF52172 MEALZ_RS11990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000673|IPR000780|IPR013656|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|PAS domain|PAS fold-4|S-adenosyl-L-methionine-dependent methyltransferase|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008757|GO:0008984 G3DSA:1.10.155.10|G3DSA:3.30.450.20|G3DSA:3.40.50.150|G3DSA:3.40.50.180|PF01339|PF01739|PF03705|PF08448|PF13596|PR00996|PTHR24422|PTHR24422:SF6|SM00138|SSF47757|SSF52738|SSF53335|SSF55785 MEALZ_RS12005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|PTHR26402:SF495|SM00448|SM00471|SSF109604|SSF52172 MEALZ_RS12010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|PTHR10366|PTHR10366:SF12|SSF51735 MEALZ_RS12015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PTHR13693|SSF53383 MEALZ_RS12025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003724|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PIRSF015617|PTHR30069|SSF52540|TIGR00708 MEALZ_RS12030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|SSF53474 MEALZ_RS12035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000671|IPR023430 Peptidase A31 family|Peptidase HybD-like domain GO:0008047|GO:0008233 G3DSA:3.40.50.1450|PTHR30302|SSF53163|TIGR00072 MEALZ_RS12040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF12974|SSF53850 MEALZ_RS12045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR013655 PAS domain|PAS fold-3 GO:0005515 G3DSA:3.30.450.20|PF08447|PTHR32089|PTHR32089:SF52|SSF55785|TIGR00229 MEALZ_RS12050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004942 Roadblock/LAMTOR2 domain G3DSA:3.30.450.30|PF03259|PTHR13323|SM00960|SSF103196 MEALZ_RS12055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF103196 MEALZ_RS12060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004130|IPR027417 GPN-loop GTPase|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF03029|PTHR11711|PTHR11711:SF117|SSF52540 MEALZ_RS12070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10 MEALZ_RS12075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 MEALZ_RS12080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004864|IPR013783|IPR013990 Immunoglobulin-like fold|Late embryogenesis abundant protein, LEA-14|Water stress and hypersensitive response domain GO:0009269 G3DSA:2.60.40.10|PF03168|SM00769|SSF117070 MEALZ_RS12085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001303|IPR017714 Class II aldolase/adducin N-terminal|Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 G3DSA:3.40.225.10|MF_01677|PF00596|PTHR10640|SM01007|SSF53639|TIGR03328 MEALZ_RS12090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004313|IPR011051|IPR014710|IPR023956 Acireductone dioxygenase ARD family|Acireductone dioxygenase ARD, bacteria|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 G3DSA:2.60.120.10|MF_01682|PF03079|PTHR23418|SSF51182 MEALZ_RS12095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006439|IPR023214|IPR023943 Enolase-phosphatase E1|HAD hydrolase, subfamily IA|HAD-like domain GO:0000287|GO:0008152|GO:0016787|GO:0019509|GO:0043874 G3DSA:3.40.50.1000|MF_01681|PF13419|PR00413|PTHR20371|SSF56784|TIGR01549|TIGR01691 MEALZ_RS12105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002477|IPR005490 L,D-transpeptidase catalytic domain|Peptidoglycan binding-like GO:0016740 G3DSA:1.10.101.10|G3DSA:2.40.440.10|PF01471|PF03734|PTHR41533|PTHR41533:SF1|SSF141523|SSF47090 MEALZ_RS12120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|PTHR33508|PTHR33508:SF1|TIGR00427 MEALZ_RS12130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001969|IPR003445|IPR004772 Aspartic peptidase, active site|Cation transporter|TrkH potassium transport family GO:0004190|GO:0006508|GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805 PF02386|PS00141|PTHR32024|PTHR32024:SF1|TIGR00933 MEALZ_RS12135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003148|IPR006037|IPR016040 NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006813|GO:0008324 G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF02254|PTHR16254|SSF116726|SSF51735 MEALZ_RS12145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003445|IPR004772 Cation transporter|TrkH potassium transport family GO:0006812|GO:0008324|GO:0016021|GO:0022820|GO:0055085|GO:0071805 PF02386|PIRSF006247|PTHR32024|PTHR32024:SF2|TIGR00933 MEALZ_RS12150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003148|IPR006036|IPR006037|IPR016040 NAD(P)-binding domain|Potassium uptake protein TrkA|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0005886|GO:0006813|GO:0008324|GO:0015079 G3DSA:3.40.50.720|PF02080|PF02254|PR00335|PTHR13789|PTHR13789:SF225|SSF116726|SSF51735 MEALZ_RS12155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001932|IPR011006 CheY-like superfamily|PPM-type phosphatase domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824 G3DSA:3.40.50.2300|PF00072|PF07228|PTHR24423|SM00331|SM00448|SSF52172 MEALZ_RS12160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021973 SprA-related family PF12118 MEALZ_RS12165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002789|IPR027417 Helicase HerA, central domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01935|PTHR30121|PTHR30121:SF1|SSF52540 MEALZ_RS12170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR015102 Transcriptional regulator HTH-type, FeoC|Winged helix-turn-helix DNA-binding domain PF09012|SSF46785 MEALZ_RS12175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003373|IPR005225|IPR006073|IPR011619|IPR011640|IPR011642|IPR027417 Ferrous iron transport protein B|Ferrous iron transport protein B, C-terminal|Ferrous iron transport protein B, N-terminal|GTP binding domain|Nucleoside transporter/FeoB GTPase, Gate domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525|GO:0015093|GO:0015684|GO:0016021 G3DSA:3.40.50.300|PF02421|PF07664|PF07670|PR00326|PTHR11649|PTHR11649:SF37|SSF52540|TIGR00231|TIGR00437 MEALZ_RS12180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007167|IPR008988 Ferrous iron transporter FeoA domain|Transcriptional repressor, C-terminal GO:0046914 PF04023|PTHR33238|SM00899|SSF50037 MEALZ_RS12185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 MEALZ_RS12190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000119|IPR005685|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain|Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 G3DSA:4.10.520.10|MF_00381|PF00216|PR01727|PS00045|PTHR33175|PTHR33175:SF5|SM00411|SSF47729|TIGR00988 MEALZ_RS12195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|PTHR10724|PTHR10724:SF6|SM00316|SSF50249|TIGR00717 MEALZ_RS12200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|PTHR21299|SSF52540|TIGR00017 MEALZ_RS12205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001986|IPR006264|IPR013792|IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase|3-phosphoshikimate 1-carboxyvinyltransferase, conserved site|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|PS00104|PS00885|PTHR21090|PTHR21090:SF5|SSF55205|TIGR01356 MEALZ_RS12210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:3.40.50.720|PF02153|PTHR21363|PTHR21363:SF0|SSF48179|SSF51735 MEALZ_RS12215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|PTHR11751|PTHR11751:SF347|SSF53383|TIGR01141 MEALZ_RS12220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001086|IPR002701|IPR002912|IPR008242|IPR010957|IPR018528|IPR020822 ACT domain|Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, type II|Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain|Prephenate dehydratase|Prephenate dehydratase, conserved site GO:0004106|GO:0004664|GO:0005737|GO:0008152|GO:0009094|GO:0016597|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PF01842|PIRSF001500|PS00857|PTHR21022|PTHR21022:SF0|SM00830|SSF48600|SSF53850|SSF55021|TIGR01807 MEALZ_RS12225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR022278 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Phosphoserine aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0004648|GO:0006564 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00160|PF00266|PIRSF000525|PS00595|PTHR21152|PTHR21152:SF1|SSF53383|TIGR01364 MEALZ_RS12230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|PTHR10169|PTHR10169:SF48|SM00434|SSF101904|SSF56719|TIGR01063 MEALZ_RS12245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004558|IPR006638|IPR007197|IPR010723|IPR023404 Coproporphyrinogen III oxidase, oxygen-independent, HemN|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.80.30.20|PF04055|PF06969|PIRSF000167|PTHR13932|PTHR13932:SF6|SM00729|SSF102114|TIGR00538 MEALZ_RS12250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR017560|IPR019734 Cytochrome c-type biogenesis protein CcmI|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PTHR12558|PTHR12558:SF12|SM00028|SSF48452|TIGR03142 MEALZ_RS12255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005616 CcmH/CycL/Ccl2/NrfF family PF03918|PTHR30009|PTHR30009:SF6 MEALZ_RS12265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004799|IPR012336|IPR013740|IPR017937 Periplasmic protein thiol:disulphide oxidoreductase DsbE|Redoxin|Thioredoxin, conserved site|Thioredoxin-like fold GO:0015036|GO:0016491|GO:0017004|GO:0030288|GO:0045454 G3DSA:3.40.30.10|PF08534|PS00194|PTHR10681|PTHR10681:SF107|SSF52833|TIGR00385 MEALZ_RS12270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002541|IPR003567|IPR003568|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410|PR01411|PTHR30009|PTHR30009:SF0|TIGR00353 MEALZ_RS12275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004329|IPR012340 CcmE/CycJ protein|Nucleic acid-binding, OB-fold GO:0005886|GO:0017003|GO:0017004 G3DSA:2.40.50.140|MF_01959|PF03100|PTHR34128|PTHR34128:SF1|SSF82093 MEALZ_RS12280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 PF04995|PTHR37531|PTHR37531:SF1|TIGR03141 MEALZ_RS12285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386|PTHR30071|TIGR01191 MEALZ_RS12290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003544|IPR026031 Cytochrome c-type biogenesis protein CcmB|Cytochrome c-type biogenesis protein CcmB, bacteria GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PIRSF002764|PR01414|PTHR30070|PTHR30070:SF1|TIGR01190 MEALZ_RS12295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR005895|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter, haem export, CcmA|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005215|GO:0005524|GO:0016887|GO:0017004|GO:0030288 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF508|SM00382|SSF52540|TIGR01189 MEALZ_RS12305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005196|IPR008928|IPR009342|IPR010383|IPR011013|IPR019282|IPR033432 Domain of unknown function DUF2329|Galactose mutarotase-like domain|Glycoside hydrolase, family 65, N-terminal|Glycosyl hydrolase 36, catalytic domain|Glycosyl hydrolase 94|Putative carbohydrate binding domain|Six-hairpin glycosidase-like GO:0003824|GO:0005975|GO:0030246 G3DSA:2.60.420.10|G3DSA:2.70.98.40|G3DSA:3.90.1200.10|PF06165|PF10091|PF17167|PTHR37469|PTHR37469:SF2|SM01068|SSF48208|SSF74650 MEALZ_RS12325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|PTHR10587|SSF88713 MEALZ_RS12335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025113 TRL-like protein family PD170898|PF13146 MEALZ_RS12345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004960|IPR014548 Bacterial lipid A biosynthesis acyltransferase|Predicted acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF028561|PTHR30606|PTHR30606:SF6 MEALZ_RS12350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF84|SSF53448 MEALZ_RS12355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006400|IPR008930|IPR018333|IPR032696|IPR032697 Squalene cyclase|Squalene cyclase, C-terminal|Squalene cyclase, N-terminal|Squalene hopene cyclase|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0016866|GO:0019746 G3DSA:1.50.10.20|PF13243|PF13249|PTHR11764|PTHR11764:SF12|SSF48239|TIGR01507|TIGR01787 MEALZ_RS12360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PTHR24567|PTHR24567:SF22|SM00100|SM00419|SSF46785|SSF51206 MEALZ_RS12365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF13545|PTHR24567|PTHR24567:SF22|SSF46785|SSF51206 MEALZ_RS12370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR013767 PAS domain|PAS fold GO:0006355 G3DSA:3.30.450.20|PF00989|SM00091|SSF55785|TIGR00229 MEALZ_RS12380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PR00111|PTHR10992|PTHR10992:SF859|SSF53474 MEALZ_RS12385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|PTHR19328|PTHR19328:SF26|SSF50952 MEALZ_RS12395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 MEALZ_RS12400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 MEALZ_RS12405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF13 MEALZ_RS12410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006664|IPR006665|IPR006690|IPR025511 Domain of unknown function DUF4398|OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PF14346|PR01021|PR01023|PS01068|PTHR30128|SSF103088 MEALZ_RS12415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025511 Domain of unknown function DUF4398 PF14346 MEALZ_RS12420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006694|IPR021327 Fatty acid hydroxylase|Protein of unknown function DUF2934 GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116|PF11154|PTHR11863|PTHR11863:SF2 MEALZ_RS12435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000811|IPR011834 Alpha-glucan phosphorylase|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PS00102|PTHR11468|PTHR11468:SF9|SSF53756|TIGR02094 MEALZ_RS12440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS12445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000673|IPR000780|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|PAS domain|S-adenosyl-L-methionine-dependent methyltransferase|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008757|GO:0008984 G3DSA:1.10.155.10|G3DSA:3.30.450.20|G3DSA:3.40.50.150|G3DSA:3.40.50.180|PF01339|PF01739|PF03705|PF13596|PR00996|PTHR24422|PTHR24422:SF6|SM00138|SSF47757|SSF52738|SSF53335|SSF55785 MEALZ_RS12450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009599 Protein of unknown function DUF1207 PF06727 MEALZ_RS12455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|SM00749 MEALZ_RS12460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006664|IPR006665|IPR011250|IPR028974 OmpA-like domain|Outer membrane protein, bacterial|Outer membrane protein/outer membrane enzyme PagP, beta-barrel|TSP type-3 repeat GO:0005509|GO:0009279|GO:0016021 G3DSA:2.40.160.20|G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|PTHR30128:SF10|SSF103088|SSF103647|SSF56925 MEALZ_RS12475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 G3DSA:3.30.160.100|PF02482|SSF69754 MEALZ_RS12485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007055 BON domain PF04972 MEALZ_RS12490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR36109|PTHR36109:SF2 MEALZ_RS12495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009078|IPR012347|IPR019052 Domain of unknown function DUF2383|Ferritin-like superfamily|Ferritin-related G3DSA:1.20.1260.10|PF09537|SSF47240 MEALZ_RS12505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002048|IPR011992 EF-hand domain|EF-hand domain pair GO:0005509 G3DSA:1.10.238.10|PF13202|SSF47473 MEALZ_RS12510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018723 Protein of unknown function DUF2254, membrane PF10011 MEALZ_RS12515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017039 Virulence factor BrkB PF03631|PIRSF035875|PTHR30213|PTHR30213:SF1 MEALZ_RS12525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018684 Protein of unknown function DUF2171 PF09939 MEALZ_RS12530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS12535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS12540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007462 Protein of unknown function DUF502 PF04367|PTHR31876|PTHR31876:SF1 MEALZ_RS12545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 MEALZ_RS12550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002226|IPR010582|IPR011614|IPR018028|IPR020835|IPR024708|IPR024712|IPR029062 Catalase active site|Catalase core domain|Catalase haem-binding site|Catalase immune-responsive domain|Catalase, mono-functional, haem-containing|Catalase, mono-functional, haem-containing, clade 2|Catalase-like domain|Class I glutamine amidotransferase-like GO:0004096|GO:0006979|GO:0020037|GO:0055114 G3DSA:2.40.180.10|G3DSA:3.40.50.880|PF00199|PF06628|PIRSF038927|PR00067|PS00437|PS00438|PTHR11465|PTHR11465:SF7|SM01060|SSF52317|SSF56634 MEALZ_RS12560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010279 Protein of unknown function DUF883, ElaB PF05957 MEALZ_RS12565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012312 Haemerythrin-like G3DSA:1.20.120.520|PF01814|PTHR35585|PTHR35585:SF1 MEALZ_RS12570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007055 BON domain PF04972 MEALZ_RS12575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR36109|PTHR36109:SF2 MEALZ_RS12580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 MEALZ_RS12585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR004014|IPR006068|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299 Cation-transporting P-type ATPase, C-terminal|Cation-transporting P-type ATPase, N-terminal|HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site GO:0000166|GO:0016021|GO:0046872 G3DSA:1.20.1110.10|G3DSA:2.70.150.10|G3DSA:3.40.1110.10|PF00122|PF00689|PF00690|PF00702|PR00119|PR00121|PS00154|PTHR24093|SM00831|SSF56784|SSF81653|SSF81660|SSF81665|TIGR01494 MEALZ_RS12590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011033|IPR014747|IPR027275 Bacterial photosynthetic reaction centre, H-chain, C-terminal|PRC-barrel domain|PRC-barrel-like GO:0019684|GO:0030077|GO:0045156 G3DSA:3.90.50.10|PF05239|SSF50346 MEALZ_RS12595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005180|IPR016796 Domain of unknown function DUF302|Uncharacterised conserved protein UCP021774 G3DSA:3.30.310.70|PF03625|PIRSF021774|PTHR38342|SSF103247 MEALZ_RS12600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS12605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS12610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008462|IPR026042 CsbD-like|Stress response protein YjbJ G3DSA:1.10.1470.10|PF05532|PIRSF039008|PTHR34977|SSF69047 MEALZ_RS12615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF774|SM00267|SSF55073|TIGR00254 MEALZ_RS12625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|PTHR34606|PTHR34606:SF1|SM00749 MEALZ_RS12635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010279 Protein of unknown function DUF883, ElaB PF05957 MEALZ_RS12640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PF07332 MEALZ_RS12655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008462 CsbD-like G3DSA:1.10.1470.10|PF05532|SSF69047 MEALZ_RS12660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|PTHR33370|SM00316|SSF50249|TIGR00008 MEALZ_RS12665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF111|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 MEALZ_RS12670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|PTHR33473|SSF54736 MEALZ_RS12675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR015797 NUDIX hydrolase domain|NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|PF00293|PTHR22769|PTHR22769:SF14|SSF55811 MEALZ_RS12680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|PTHR11933|PTHR11933:SF10|SSF52402|TIGR00420 MEALZ_RS12685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000362|IPR004769|IPR008948|IPR013539|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase PurB, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0006188|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF08328|PR00149|PS00163|PTHR11444|PTHR11444:SF17|SSF48557|TIGR00928 MEALZ_RS12690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:2.40.10.240|G3DSA:3.40.1780.10|MF_00113|PF02547|PTHR30307|PTHR30307:SF0|SSF111337|TIGR00113 MEALZ_RS12700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024442 Transposase, zinc-ribbon PF12760 MEALZ_RS12705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024445 ISXO2-like transposase domain PF12762 MEALZ_RS12710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF116734 MEALZ_RS12720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|PF01926|SSF52540 MEALZ_RS12725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR027417 GTP binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|PF01926|SSF52540 MEALZ_RS12735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021342 Protein of unknown function DUF2959 PF11172 MEALZ_RS12740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|PTHR30203|PTHR30203:SF1|SSF56954 MEALZ_RS12745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|PTHR30097|PTHR30097:SF3|SSF111369|TIGR01730 MEALZ_RS12750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.10.3850.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|PTHR32063|PTHR32063:SF19|SSF82693|SSF82714|SSF82866|TIGR00914 MEALZ_RS12755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002220|IPR013785|IPR020625 Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site GO:0003824|GO:0008152|GO:0016829 G3DSA:3.20.20.70|PF00701|PIRSF001365|PR00146|PS00666|PTHR12128|SM01130|SSF51569 MEALZ_RS12760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014991 Protein of unknown function DUF1840 PF08895 MEALZ_RS12765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PTHR30212|PTHR30212:SF3|SSF50475 MEALZ_RS12780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 SSF47175 MEALZ_RS12790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002821|IPR003692|IPR008040 Hydantoinase B/oxoprolinase|Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0003824|GO:0016787 PF01968|PF02538|PF05378|PTHR11365|PTHR11365:SF2 MEALZ_RS12795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002747|IPR023227|IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal|S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal|SAM-dependent chlorinase/fluorinase G3DSA:2.40.30.90|PF01887|PIRSF006779|PTHR35092|PTHR35092:SF1|SSF101852|SSF102522 MEALZ_RS12800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011063|IPR012089|IPR014729 2-thiocytidine tRNA biosynthesis protein, TtcA|Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0008033 G3DSA:3.40.50.620|MF_01850|PF01171|PIRSF004976|PTHR11807|PTHR11807:SF16|SSF52402 MEALZ_RS12805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014030|IPR014031|IPR016039|IPR018201|IPR020841 Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0008152 G3DSA:3.40.47.10|PF00109|PF02801|PS00606|PTHR11712|SM00825|SSF53901 MEALZ_RS12810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010083|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0008693 G3DSA:3.10.129.10|MF_00405|PF07977|SSF54637|TIGR01749 MEALZ_RS12815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000189|IPR008258|IPR008939|IPR012289|IPR016026|IPR023346 Lysozyme-like domain|Lytic transglycosylase, superhelical U-shaped|Lytic transglycosylase, superhelical U-shaped and linker domain|Lytic transglycosylase, superhelical linker|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0004553|GO:0008933|GO:0016020|GO:0042597 G3DSA:1.10.1240.20|G3DSA:1.10.530.10|G3DSA:1.25.20.10|PF01464|PF14718|PS00922|PTHR21666|SSF48435|SSF53955 MEALZ_RS12820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PF00664|PS00211|PTHR24221|PTHR24221:SF233|SM00382|SSF52540|SSF90123 MEALZ_RS12825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260 G3DSA:3.20.20.140|PF02811|PTHR30007|PTHR30007:SF4|SM00481|SSF89550 MEALZ_RS12830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016602 Uncharacterised conserved protein UCP012666 PIRSF012666|SSF55931 MEALZ_RS12835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|SSF53187 MEALZ_RS12840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005358|IPR008228 Putative zinc- or iron-chelating domain containing protein|Uncharacterised conserved protein UCP006173 MF_00676|PF03692|PIRSF006173|PTHR37421|PTHR37421:SF1 MEALZ_RS12845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004808|IPR005135|IPR020848 AP endonuclease 1|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00727|PS00728|PTHR22748|SSF56219|TIGR00195|TIGR00633 MEALZ_RS12850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005122 Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|SM00986|SM00987|SSF52141 MEALZ_RS12855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018841 Protein of unknown function DUF2442 PF10387 MEALZ_RS12860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS12865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS12875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR001932|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PPM-type phosphatase domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0003824 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF07228|PF13426|PTHR10799|PTHR10799:SF710|SM00052|SM00086|SM00267|SM00331|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|SSF81606|TIGR00229|TIGR00254 MEALZ_RS12880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001455 TusA-like domain G3DSA:3.30.110.40|PF01206|PS01148|PTHR33279|SSF64307 MEALZ_RS12885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR006366|IPR006367|IPR012409|IPR014776|IPR014777|IPR016040|IPR019478|IPR028281 NAD(P)-binding domain|Sirohaem synthase|Sirohaem synthase, N-terminal|Sirohaem synthase, dimerisation domain|Siroheme synthase, central domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:1.10.8.210|G3DSA:3.30.160.110|G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.720|MF_01646|PF00590|PF10414|PF13241|PF14824|PIRSF036426|PTHR21091|PTHR21091:SF16|SSF51735|SSF53790|SSF75615|TIGR01469|TIGR01470 MEALZ_RS12890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001680|IPR015943|IPR017986|IPR019775 WD40 repeat|WD40 repeat, conserved site|WD40-repeat-containing domain|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PS00678|PTHR22847|PTHR22847:SF50|SM00320|SSF50978 MEALZ_RS12895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 MEALZ_RS12905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:1.20.5.470|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|PTHR11587|PTHR11587:SF2|SSF52402|SSF69864|TIGR00032 MEALZ_RS12910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000305 GIY-YIG nuclease superfamily PF01541|PTHR34477|PTHR34477:SF1|SSF82771 MEALZ_RS12915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015947 PUA-like domain SSF88697 MEALZ_RS12925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019267 CRISPR-associated protein Cas6, C-terminal PF10040 MEALZ_RS12930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007698|IPR007886|IPR008143|IPR016040|IPR024605|IPR026255 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain|Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2|NAD(P) transhydrogenase, alpha subunit|NAD(P) transhydrogenase, alpha subunit, C-terminal|NAD(P)-binding domain GO:0008746|GO:0015992|GO:0016491|GO:0055114 G3DSA:3.40.50.1770|PF01262|PF05222|PF12769|PIRSF000203|PS00837|PTHR10160|PTHR10160:SF19|SM01002|SM01003|SSF51735|SSF52283|TIGR00561 MEALZ_RS12935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012136|IPR029035 DHS-like NAD/FAD-binding domain|NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 G3DSA:3.40.50.1220|PF02233|PIRSF000204|PTHR10160|SSF52467 MEALZ_RS12940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|PTHR26402:SF495|SM00448|SM00471|SSF109604|SSF52172 MEALZ_RS12945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001466|IPR012338 Beta-lactamase-related|Beta-lactamase/transpeptidase-like G3DSA:3.40.710.10|PF00144|PTHR22935|PTHR22935:SF77|SSF56601 MEALZ_RS12950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR35936|SSF53850 MEALZ_RS12955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001638 Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|PTHR35936|SSF53850 MEALZ_RS12960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006 CheY-like superfamily|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF02518|PR00344|PTHR24423|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47384|SSF52172|SSF55874 MEALZ_RS12970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|SSF88713 MEALZ_RS12975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|SSF88713 MEALZ_RS12980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027450|IPR032852 Alpha-ketoglutarate-dependent dioxygenase AlkB-like|DNA oxidative demethylase ALKBH2 GO:0006281 G3DSA:2.60.120.590|PF13532|PTHR31573|PTHR31573:SF1|SSF51197 MEALZ_RS12985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003660|IPR013655|IPR029787 EAL domain|GGDEF domain|HAMP domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0007165|GO:0016021 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00672|PF00990|PF08447|PTHR33121|PTHR33121:SF10|SM00052|SM00086|SM00267|SM00304|SSF141868|SSF158472|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS12990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001948|IPR023358 Peptidase M18|Peptidase M18, domain 2 GO:0004177|GO:0006508|GO:0008270 G3DSA:2.30.250.10|G3DSA:3.40.630.10|PF02127|PR00932|PTHR28570|SSF101821|SSF53187 MEALZ_RS12995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002579|IPR011057|IPR028427 Mss4-like|Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MrsB GO:0006979|GO:0016671|GO:0030091|GO:0033743|GO:0055114 G3DSA:2.170.150.20|MF_01400|PF01641|PTHR10173|PTHR10173:SF18|SSF51316|TIGR00357 MEALZ_RS13000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002589 Macro domain G3DSA:3.40.220.10|PF01661|PTHR11106|SM00506|SSF52949 MEALZ_RS13005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005899|IPR023424 Oxaloacetate decarboxylase gamma chain, probable|Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 MF_00404|PF04277|TIGR01195 MEALZ_RS13010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007016 O-antigen ligase-related PF04932 MEALZ_RS13015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001544|IPR005785|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF7|SSF56752|TIGR01122 MEALZ_RS13020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005190|IPR013546|IPR023057 Glutamate-ammonia ligase adenylyltransferase, repeated domain|Glutamate-ammonia-ligase adenylyltransferase|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0008882|GO:0016779 G3DSA:3.30.460.10|MF_00802|PF03710|PF08335|PTHR30621|SSF81301|SSF81593 MEALZ_RS13025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PIRSF006648|PR00164|PTHR30413|PTHR30413:SF2 MEALZ_RS13030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF305|SM00382|SSF52540 MEALZ_RS13035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003695|IPR022371|IPR030673 Exopolyphosphatase|Ppx/GppA phosphatase|Pyrophosphatase, GppA/Ppx-type GO:0004309|GO:0006793 G3DSA:3.30.420.150|G3DSA:3.30.420.40|PF02541|PIRSF001267|PTHR30005|PTHR30005:SF4|SSF109604|SSF53067|TIGR03706 MEALZ_RS13045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF00034|PF03150|PIRSF000294|PTHR30600|PTHR30600:SF7|SSF46626 MEALZ_RS13050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR30466|PTHR30466:SF2|SM00903|SSF50475 MEALZ_RS13055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS13060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS13065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:1.10.1660.10|PF13591 MEALZ_RS13070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|PTHR24078|PTHR24078:SF190|SM00271|SSF46565|SSF49493 MEALZ_RS13075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005631 Flavinator of succinate dehydrogenase G3DSA:1.10.150.250|PF03937|PTHR39585|PTHR39585:SF1|SSF109910 MEALZ_RS13080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001041|IPR004489|IPR006058|IPR009051|IPR012675|IPR017900|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13534|PS00197|PS00198|PTHR11921|PTHR11921:SF27|SSF46548|SSF54292|TIGR00384 MEALZ_RS13085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003952|IPR003953|IPR011281|IPR014006|IPR015939|IPR023753|IPR027477|IPR030664 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase, flavoprotein subunit|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0006099|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PS00504|PTHR11632|PTHR11632:SF51|SSF46977|SSF51905|SSF56425|TIGR01812|TIGR01816 MEALZ_RS13090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000701|IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0016021|GO:0016627|GO:0020037 G3DSA:1.20.1300.10|PF01127|SSF81343|TIGR02968 MEALZ_RS13095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000701|IPR014314|IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site|Succinate dehydrogenase, cytochrome b556 subunit|Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0000104|GO:0006099|GO:0009055|GO:0016020|GO:0016627|GO:0045281 G3DSA:1.20.1300.10|PF01127|PIRSF000178|PS01000|PS01001|PTHR10978|SSF81343|TIGR02970 MEALZ_RS13100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 MEALZ_RS13105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|SM01321|SSF143422 MEALZ_RS13110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001962|IPR014729|IPR017932|IPR029055 Asparagine synthase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|PTHR11772|PTHR11772:SF10|SSF52402|SSF56235 MEALZ_RS13115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024004|IPR028098 Glycosyltransferase family 1, Daro2409 family|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13579|PF13692|PTHR12526|SSF53756|TIGR04063 MEALZ_RS13125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|SSF53448 MEALZ_RS13130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 MEALZ_RS13135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011335|IPR011856 Restriction endonuclease type II-like|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:1.10.287.950|G3DSA:3.40.1350.10|PTHR38753|SSF52980 MEALZ_RS13140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS13145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011335|IPR011856 Restriction endonuclease type II-like|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|PTHR38753|SSF52980 MEALZ_RS13150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 MEALZ_RS13155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR38753 MEALZ_RS13160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|SSF81301 MEALZ_RS13170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 MEALZ_RS13175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008928|IPR008930|IPR032696 Six-hairpin glycosidase-like|Squalene cyclase, C-terminal|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0003824 G3DSA:1.50.10.20|PF13243|SSF48208 MEALZ_RS13180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 G3DSA:3.40.50.170|PF00551|SSF53328 MEALZ_RS13190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:3.40.50.980|PTHR36932|PTHR36932:SF1|SSF56801 MEALZ_RS13195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR017529|IPR020845|IPR025110 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|PTHR24096|SSF56801|TIGR03098 MEALZ_RS13200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000183|IPR002433|IPR009006|IPR017530|IPR022643|IPR022644|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Ornithine decarboxylase|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel|Pyridoxal-dependent decarboxylase, exosortase system type 1 associated GO:0003824|GO:0006596 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PR01179|PR01182|PTHR11482|PTHR11482:SF5|SSF50621|SSF51419|TIGR03099 MEALZ_RS13205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13440|PTHR30250 MEALZ_RS13210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 MEALZ_RS13215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 MEALZ_RS13220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF779|SSF53335 MEALZ_RS13225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514|IPR009057 Homeodomain-like|Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 G3DSA:1.10.10.60|PF01527|PTHR33215|PTHR33215:SF2|SSF46689 MEALZ_RS13240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 MEALZ_RS13245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain PF00534|PF13439|PTHR12526|PTHR12526:SF320|SSF53756 MEALZ_RS13250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 MEALZ_RS13255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001382|IPR008928|IPR008930|IPR012341|IPR012669 Glycoside hydrolase family 47|Pectic acid lyase|Six-hairpin glycosidase|Six-hairpin glycosidase-like|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0003824|GO:0004571|GO:0005509|GO:0016020 G3DSA:1.50.10.10|G3DSA:1.50.10.20|PF01532|PF09492|SSF48208 MEALZ_RS13260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 MEALZ_RS13265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000863|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Sulfotransferase domain GO:0008146 G3DSA:3.40.50.300|PF00685|SSF52540 MEALZ_RS13270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 PF02522|PTHR11104|SSF110710 MEALZ_RS13275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13440 MEALZ_RS13280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13440 MEALZ_RS13290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 MEALZ_RS13300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007016|IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related|O-antigen ligase-related PF04932|TIGR03097 MEALZ_RS13310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 MEALZ_RS13315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR017522|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain|Sugar transferase, PEP-CTERM, Stp2 G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756|TIGR03088 MEALZ_RS13320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|SSF53649 MEALZ_RS13325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13231 MEALZ_RS13340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000653|IPR012749|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF14|SSF53383|TIGR02379 MEALZ_RS13345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|PTHR40277|TIGR00374 MEALZ_RS13350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 MEALZ_RS13355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003806|IPR013816|IPR016185 ATP-grasp fold, DUF201-type|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain GO:0005524|GO:0046872 G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF02655|PTHR23132|SM01209|SSF52440|SSF56059 MEALZ_RS13360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014985 WbqC-like protein family PF08889 MEALZ_RS13365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF49|SSF53448 MEALZ_RS13370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005835|IPR005907|IPR029044 Glucose-1-phosphate thymidylyltransferase, short form|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0008879|GO:0009058|GO:0016779|GO:0045226 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF105|SSF53448|TIGR01207 MEALZ_RS13375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012547|IPR018631 AAA-ATPase-like domain|PD-(D/E)XK nuclease superfamily 9 PF08011|PF09820|PTHR34825|PTHR34825:SF1 MEALZ_RS13380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS13385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000917|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Sulfatase, N-terminal GO:0003824|GO:0008152|GO:0008484 G3DSA:3.40.720.10|PF00884|PTHR10342|PTHR10342:SF207|SSF53649 MEALZ_RS13390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027050|IPR027417 Nuclease SbcCD subunit C|P-loop containing nucleoside triphosphate hydrolase GO:0004518|GO:0006281 G3DSA:3.40.50.300|PF13476|PF13558|PTHR32114|PTHR32114:SF2|SSF52540 MEALZ_RS13395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004593|IPR004843|IPR026843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Nuclease SbcCD subunit D|Nuclease SbcCD subunit D, C-terminal domain GO:0004519|GO:0006259|GO:0008408|GO:0016787 G3DSA:3.60.21.10|PF00149|PF12320|PTHR30337|PTHR30337:SF0|SSF56300|TIGR00619 MEALZ_RS13400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PF13487|PTHR32071|PTHR32071:SF39|SM00448|SSF109604|SSF52172 MEALZ_RS13405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR32071|PTHR32071:SF39|SM00448|SSF52172 MEALZ_RS13415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF14|SSF53448|TIGR01099 MEALZ_RS13420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|PTHR12526|PTHR12526:SF387|SSF51182|SSF53448|TIGR01479 MEALZ_RS13425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF64182 MEALZ_RS13430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002891|IPR027417 Adenylyl-sulfate kinase|P-loop containing nucleoside triphosphate hydrolase GO:0000103|GO:0004020|GO:0005524 G3DSA:3.40.50.300|MF_00065|PF01583|PTHR11055|SSF52540|TIGR00455 MEALZ_RS13435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005886|IPR016040 NAD(P)-binding domain|UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PTHR10366|PTHR10366:SF39|SSF51735|TIGR01179 MEALZ_RS13440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003362|IPR017464|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|Sugar transferase, PEP-CTERM system associated PF02397|PF13727|PTHR30576|PTHR30576:SF0|TIGR03013|TIGR03025 MEALZ_RS13445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009003 Peptidase S1, PA clan G3DSA:2.40.10.10|PF13365|PTHR22939|PTHR22939:SF79|SSF50494 MEALZ_RS13450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013426|IPR019127|IPR026392 Exosortase EpsH-related|Exosortase, EpsH|Exosortase/Archaeosortase domain PF09721|TIGR02602|TIGR04178 MEALZ_RS13465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010870|IPR023614 Phosphate-selective porin O/P|Porin domain G3DSA:2.40.160.10|PF07396|SSF56935 MEALZ_RS13470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR11911|PTHR11911:SF23|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 MEALZ_RS13475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004792|IPR022460|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|Conserved hyptotheical protein CHP03862, flavoprotein, PP4765|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00419|PTHR10617|PTHR10617:SF103|SSF160996|SSF51905|TIGR00275|TIGR03862 MEALZ_RS13480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000361|IPR016092|IPR017870 FeS cluster biogenesis|FeS cluster insertion protein|FeS cluster insertion, C-terminal, conserved site GO:0005198|GO:0016226|GO:0051536 G3DSA:2.60.300.12|PF01521|PS01152|PTHR10072|SSF89360|TIGR00049 MEALZ_RS13485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454 Aminotransferase class V domain|Cysteine desulfurase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PTHR11601|PTHR11601:SF20|SSF53383 MEALZ_RS13490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|PTHR33221|PTHR33221:SF1|SSF46785|TIGR00738 MEALZ_RS13500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR005881|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Serine O-acetyltransferase|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001|GO:0016740 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PS00101|PTHR23416|PTHR23416:SF55|SSF51161|TIGR01172 MEALZ_RS13505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001537|IPR004384|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase TrmH, group 1|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 G3DSA:3.40.1280.10|PF00588|PIRSF004808|PTHR12029|SSF75217|TIGR00050 MEALZ_RS13510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655 MEALZ_RS13515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS13520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002810|IPR012340|IPR029045 ClpP/crotonase-like domain|NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|G3DSA:3.90.226.10|PF01957|PTHR33507|PTHR33507:SF1|SSF141322|SSF52096 MEALZ_RS13525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972 Band 7 domain|Stomatin family GO:0016020 PF01145|PR00721|PTHR10264|PTHR10264:SF60|SM00244|SSF117892 MEALZ_RS13530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000540|IPR002898 Flagellar motor protein MotA, conserved site|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PS01307|PTHR30433 MEALZ_RS13535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|PTHR14269 MEALZ_RS13540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005135 Endonuclease/exonuclease/phosphatase G3DSA:3.60.10.10|PF03372|PTHR15822|PTHR15822:SF7|SSF56219 MEALZ_RS13550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR015797|IPR020084|IPR020476 NUDIX hydrolase|NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PR00502|PS00893|PTHR22769|PTHR22769:SF42|SSF55811 MEALZ_RS13555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|PTHR30053:SF5|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 MEALZ_RS13560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR002121|IPR004589|IPR006293|IPR010997|IPR011545|IPR011991|IPR014001|IPR018982|IPR027417|IPR029491|IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain|DEAD/DEAH box helicase domain|DNA helicase, ATP-dependent, RecQ type|DNA helicase, ATP-dependent, RecQ type, bacterial|HRDC domain|HRDC-like|Helicase Helix-turn-helix domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RQC domain|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003676|GO:0003824|GO:0004003|GO:0005524|GO:0005622|GO:0006260|GO:0006281|GO:0006310|GO:0008026|GO:0009432|GO:0043140|GO:0044237 G3DSA:1.10.10.10|G3DSA:1.10.150.80|G3DSA:3.40.50.300|PF00270|PF00271|PF00570|PF09382|PF14493|PF16124|PTHR13710|PTHR13710:SF81|SM00341|SM00487|SM00490|SM00956|SSF47819|SSF52540|TIGR00614|TIGR01389 MEALZ_RS13570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006334|IPR007370 Glutamate--cysteine ligase|Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 MF_00578|PF04262|PTHR38761|SSF55931|TIGR01434 MEALZ_RS13575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002500|IPR004511|IPR011798|IPR014729 Adenosine 5'-phosphosulphate reductase|Phosphoadenosine phosphosulphate reductase|Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004604|GO:0008152|GO:0019344|GO:0019379|GO:0055114 G3DSA:3.40.50.620|PF01507|PIRSF000857|PTHR23293|PTHR23293:SF11|SSF52402|TIGR00434|TIGR02055 MEALZ_RS13585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000397|IPR016153|IPR016154|IPR023212 Heat shock protein Hsp33|Heat shock protein Hsp33, C-terminal|Heat shock protein Hsp33, N-terminal|Heat shock protein Hsp33, helix hairpin bin domain GO:0005737|GO:0006457|GO:0051082 G3DSA:1.10.287.480|G3DSA:3.55.30.10|G3DSA:3.90.1280.10|PF01430|PIRSF005261|PTHR30111|PTHR30111:SF1|SSF118352|SSF64397 MEALZ_RS13590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002569|IPR028427 Peptide methionine sulfoxide reductase|Peptide methionine sulphoxide reductase MsrA GO:0006979|GO:0008113|GO:0016671|GO:0030091|GO:0055114 G3DSA:3.30.1060.10|MF_01401|PF01625|PTHR10173|PTHR10173:SF36|SSF55068|TIGR00401 MEALZ_RS13595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|PTHR24423:SF427|SM00387|SSF47384|SSF55874 MEALZ_RS13600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002197|IPR009057|IPR011006 CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.40.50.2300|PF00072|PF02954|PR01590|PTHR26402|PTHR26402:SF344|SM00448|SSF52172 MEALZ_RS13605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016181|IPR022484 Acyl-CoA N-acyltransferase|PEP-CTERM/exosortase system-associated acyltransferase, predicted G3DSA:3.40.630.30|PF13444|SSF55729|TIGR03694 MEALZ_RS13610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016181|IPR022484 Acyl-CoA N-acyltransferase|PEP-CTERM/exosortase system-associated acyltransferase, predicted G3DSA:3.40.630.30|PF13444|SSF55729|TIGR03694 MEALZ_RS13615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10 MEALZ_RS13620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004869 Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|PTHR33406:SF2|SSF82866 MEALZ_RS13625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000594|IPR016040 NAD(P)-binding domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.50.720|PF00899|PTHR10953|PTHR10953:SF145|SSF69572 MEALZ_RS13635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013424 PEP-CTERM protein-sorting domain PF07589|TIGR02595 MEALZ_RS13640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS13645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|PF14559|PTHR23083|SM00028|SSF48452 MEALZ_RS13650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143011 MEALZ_RS13665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013406 Conserved hypothetical protein CHP02574, addiction module PF09720 MEALZ_RS13670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like PF01850|PTHR36173|PTHR36173:SF2|SSF88723 MEALZ_RS13675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|SSF143120 MEALZ_RS13680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008201 Protein of unknown function DUF86 G3DSA:1.20.120.580|PF01934|PTHR34139 MEALZ_RS13685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 G3DSA:3.30.460.10|PF01909|PTHR33571|PTHR33571:SF1|SSF81301 MEALZ_RS13695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 MEALZ_RS13700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000209|IPR015500|IPR017315|IPR022398|IPR023827|IPR023828 Peptidase S8, subtilisin, Asp-active site|Peptidase S8, subtilisin, His-active site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8, subtilisin-related|Peptidase S8/S53 domain|Peptidase S8A, subtilisin-related, proteobacteria-2 GO:0004252|GO:0006508 G3DSA:3.40.50.200|PF00082|PIRSF037901|PR00723|PS00136|PS00137|PS00138|PTHR10795|SSF52743 MEALZ_RS13705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013424 PEP-CTERM protein-sorting domain PF07589 MEALZ_RS13710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR015374|IPR019734 Chs5p-Arf1p binding|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF09295|PF13432|PF14559|PTHR23083|SM00028|SSF48452 MEALZ_RS13715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR031807 HicB-like antitoxin of toxin-antitoxin system PF15919|SSF143100 MEALZ_RS13720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007337|IPR026262 Antitoxin DinJ|RelB antitoxin/Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 PF04221|PIRSF003108|PTHR38781|PTHR38781:SF1|TIGR02384 MEALZ_RS13725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR033399 Putative outer membrane lipoprotein-sorting protein G3DSA:2.50.20.10|PF17131 MEALZ_RS13730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021731 AMIN domain PF11741 MEALZ_RS13735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003331|IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like|UDP-N-acetylglucosamine 2-epimerase domain GO:0008761 G3DSA:3.40.50.2000|PF02350|PTHR18964|PTHR18964:SF2|SSF53756|TIGR00236 MEALZ_RS13740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027050|IPR027417 Nuclease SbcCD subunit C|P-loop containing nucleoside triphosphate hydrolase GO:0004518|GO:0006281 G3DSA:3.40.50.300|PF13476|PF13558|PTHR32114|PTHR32114:SF2|SSF52540 MEALZ_RS13745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR002123|IPR020845 AMP-binding, conserved site|AMP-dependent synthetase/ligase|Phospholipid/glycerol acyltransferase GO:0003824|GO:0008152|GO:0016746 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.1130.10|G3DSA:3.40.50.980|PF00501|PF01553|PS00455|PTHR24096|PTHR24096:SF177|SM00563|SSF56801|SSF69593 MEALZ_RS13755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004852|IPR009056 Cytochrome c-like domain|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF03150|PTHR30600|SSF46626 MEALZ_RS13760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003414|IPR024953|IPR025198|IPR025200 Polyphosphate kinase|Polyphosphate kinase C-terminal domain|Polyphosphate kinase N-terminal domain|Polyphosphate kinase middle domain GO:0006799|GO:0008976|GO:0009358 G3DSA:3.30.1840.10|G3DSA:3.30.870.10|MF_00347|PF02503|PF13089|PF13090|PIRSF015589|PTHR30218|PTHR30218:SF0|SSF140356|SSF143724|SSF56024|TIGR03705 MEALZ_RS13765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR006935|IPR013670|IPR014001|IPR027417|IPR029464 EcoEI R protein C-terminal domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type I restriction enzyme R protein, N-terminal domain GO:0003677|GO:0003824|GO:0005524|GO:0006304|GO:0016787 G3DSA:3.40.50.300|PF00271|PF04851|PF08463|PF13588|PTHR30195|PTHR30195:SF3|SM00487|SSF52540 MEALZ_RS13775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143100 MEALZ_RS13780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 MEALZ_RS13785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF2|SSF53335 MEALZ_RS13790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF13508|PTHR36449|SSF55729 MEALZ_RS13795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR014795 Ribbon-helix-helix|Vibrio phage ICP1, Orf50 GO:0006355 G3DSA:1.20.5.780|PF08681|SSF47598 MEALZ_RS13805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010093 SinI-like, DNA-binding domain GO:0003677 PF12728|TIGR01764 MEALZ_RS13825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003751|IPR012340 Carbon storage regulator|Nucleic acid-binding, OB-fold GO:0003723|GO:0006109|GO:0006402 G3DSA:2.40.50.140|MF_00167|PD009007|PF02599|PTHR34984|PTHR34984:SF1|SSF117130|TIGR00202 MEALZ_RS13830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001048|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795 ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain GO:0004072|GO:0008152|GO:0008652|GO:0009089|GO:0016597 G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PS00324|PTHR21499|PTHR21499:SF27|SSF53633|SSF55021|TIGR00656|TIGR00657 MEALZ_RS13835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|PTHR11777|PTHR11777:SF9|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 MEALZ_RS13840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003783|IPR011991 Regulatory protein RecX|Winged helix-turn-helix DNA-binding domain GO:0006282 G3DSA:1.10.10.10|MF_01114|PF02631|PTHR33602|PTHR33602:SF1 MEALZ_RS13845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|PTHR22942|PTHR22942:SF1|SM00382|SSF52540|SSF54752|TIGR02012 MEALZ_RS13860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 G3DSA:3.40.50.2000|PF02684|PTHR30372|PTHR30372:SF0|SSF53756|TIGR00215 MEALZ_RS13865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|PTHR30244|PTHR30244:SF15|SSF53383 MEALZ_RS13870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000683|IPR016040 NAD(P)-binding domain|Oxidoreductase, N-terminal GO:0016491 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF01408|PTHR22604|PTHR22604:SF14|SSF51735|SSF55347 MEALZ_RS13875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005593|IPR018969|IPR018970|IPR019789|IPR019790|IPR023962|IPR029061 Probable phosphoketolase|Thiamin diphosphate-binding fold|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site|Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site GO:0005975|GO:0016832 G3DSA:3.40.50.970|MF_01403|PF03894|PF09363|PF09364|PIRSF017245|PS60002|PS60003|PTHR31273|PTHR31273:SF0|SSF52518 MEALZ_RS13880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|PS01076|PTHR21060|PTHR21060:SF11|SSF53067|TIGR00016 MEALZ_RS13885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016040|IPR029903 NAD(P)-binding domain|RmlD-like substrate binding domain G3DSA:3.40.50.720|PF04321|PTHR10366|PTHR10366:SF430|SSF51735 MEALZ_RS13890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR30269|PTHR30269:SF14 MEALZ_RS13895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR11935|PTHR11935:SF113|SM00849|SSF56281 MEALZ_RS13900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR013780|IPR013781|IPR015902|IPR016377|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Sucrose phosphorylase GO:0003824|GO:0005975|GO:0005985|GO:0009018 G3DSA:2.60.40.1180|G3DSA:3.20.20.80|G3DSA:3.90.400.10|PF00128|PIRSF003059|PTHR10357|PTHR10357:SF132|SM00642|SSF51445 MEALZ_RS13905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000146|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0042132|GO:0042578 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|PTHR11556|SSF56655 MEALZ_RS13910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 MEALZ_RS13915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|PTHR11751|PTHR11751:SF401|SSF53383 MEALZ_RS13920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000962|IPR012784|IPR020458|IPR020460 RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type|Zinc finger, DksA/TraR C4-type conserved site|Zinc finger, DksA/TraR C4-type, bacteria GO:0008270 MF_00926|PF01258|PR00618|PS01102|PTHR33823|PTHR33823:SF2|SSF109635|SSF57716|TIGR02420 MEALZ_RS13925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000924|IPR014729|IPR020058|IPR022380 Glutamyl-Q tRNA(Asp) synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0005524|GO:0005737|GO:0006400|GO:0016876|GO:0043039 G3DSA:3.40.50.620|G3DSA:3.90.800.10|MF_01428|PF00749|PR00987|PTHR11451|PTHR11451:SF35|SSF52374|TIGR03838 MEALZ_RS13930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR011904|IPR020845|IPR025110|IPR032387 AMP-binding enzyme C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase|Acetate-CoA ligase|Acetyl-coenzyme A synthetase, N-terminal domain GO:0003824|GO:0003987|GO:0008152|GO:0016208|GO:0019427 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|MF_01123|PF00501|PF13193|PF16177|PS00455|PTHR24095|PTHR24095:SF178|SSF56801|TIGR02188 MEALZ_RS13935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002500|IPR011784|IPR014729 Phosphoadenosine phosphosulphate reductase|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase, small subunit GO:0003824|GO:0004781|GO:0008152|GO:0019419 G3DSA:3.40.50.620|MF_00064|PF01507|PIRSF002936|PTHR23293|PTHR23293:SF6|SSF52402|TIGR02039 MEALZ_RS13940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012657 23S rRNA-intervening sequence protein G3DSA:1.20.1440.60|PF05635|PTHR38471|PTHR38471:SF2|SSF158446|TIGR02436 MEALZ_RS13945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000795|IPR005225|IPR009000|IPR009001|IPR011779|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Sulphate adenylyltransferase, large subunit|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation protein, beta-barrel domain GO:0003924|GO:0005525|GO:0006790 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00062|PF00009|PR00315|PS00301|PTHR23115|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR02034 MEALZ_RS13955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF710|SM00267|SSF55073|TIGR00254 MEALZ_RS13960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF586|SM00448|SSF52172 MEALZ_RS13965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207 CheW-like domain|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF20|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55874 MEALZ_RS13970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 MEALZ_RS13975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR004089|IPR004090|IPR013655 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PF13188|PR00260|PTHR32089|PTHR32089:SF63|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 MEALZ_RS13980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 MEALZ_RS13985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF13466|SSF52091 MEALZ_RS13990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PTHR24422|PTHR24422:SF13|SM00138|SSF47757|SSF53335 MEALZ_RS13995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005659|IPR011324 Chemoreceptor glutamine deamidase CheD|Cytotoxic necrotizing factor-like, catalytic GO:0006935|GO:0050568 MF_01440|PF03975|PTHR35147|PTHR35147:SF2|SSF64438 MEALZ_RS14000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF21|SM00448|SSF52172|SSF52738 MEALZ_RS14005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PTHR32089|SM00283|SSF58104 MEALZ_RS14010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002645|IPR003658 Anti-sigma factor antagonist|STAS domain GO:0006355|GO:0045152 G3DSA:3.30.750.24|PF01740|PTHR33495|SSF52091|TIGR00377 MEALZ_RS14015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR011006 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF13581|SSF52172|SSF55874 MEALZ_RS14020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:1.10.287.950|SSF58104 MEALZ_RS14025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|PTHR32145|PTHR32145:SF7|SM00849|SSF56281 MEALZ_RS14055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003607|IPR006674|IPR011006 CheY-like superfamily|HD domain|HD/PDEase domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:1.10.3210.10|G3DSA:3.40.50.2300|PF00072|PF01966|PTHR26402|PTHR26402:SF405|SM00448|SM00471|SSF109604|SSF52172 MEALZ_RS14060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003018|IPR003594|IPR003661|IPR004358|IPR013655|IPR029016 GAF domain|GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF00512|PF01590|PF02518|PF08447|PF13185|PF13426|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55781|SSF55785|SSF55874|TIGR00229 MEALZ_RS14070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF434|SM00448|SSF52172 MEALZ_RS14075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001789|IPR008207|IPR011006|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PF01627|PTHR10799|PTHR10799:SF750|SM00267|SM00448|SSF47226|SSF52172|SSF55073|TIGR00254 MEALZ_RS14080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015893|IPR025996 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal|WHG domain GO:0003677 G3DSA:1.10.357.10|PF00440|PF13305|PTHR30055|PTHR30055:SF23|SSF46689|SSF48498 MEALZ_RS14085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PTHR30537|PTHR30537:SF5|SSF46785|SSF53850 MEALZ_RS14090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR22769|PTHR22769:SF35|SSF55811 MEALZ_RS14095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|PTHR13799|SSF102705|TIGR00486 MEALZ_RS14105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13489|SSF53335 MEALZ_RS14110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004680|IPR006037|IPR031312 Citrate transporter-like domain|Regulator of K+ conductance, C-terminal|Sodium/sulphate symporter, conserved site GO:0006813|GO:0008324|GO:0016021|GO:0055085 G3DSA:3.30.70.1450|PF02080|PF03600|PS01271|PTHR10283|PTHR10283:SF79|SSF116726 MEALZ_RS14120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF12802|SM00347|SSF46785 MEALZ_RS14125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018592|IPR023122 NE1680-like domain|Protein of unknown function DUF2024 G3DSA:3.10.510.10|PF09630|SSF160766 MEALZ_RS14130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003795 Protein of unknown function DUF192 PF02643|PTHR37953|PTHR37953:SF1 MEALZ_RS14135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|PTHR12215|SSF56214 MEALZ_RS14140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000101|IPR029055 Gamma-glutamyltranspeptidase|Nucleophile aminohydrolases, N-terminal GO:0003840|GO:0006749 PF01019|PR01210|PTHR11686|SSF56235|TIGR00066 MEALZ_RS14145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PTHR22981|PTHR22981:SF48|SSF48179|SSF51735 MEALZ_RS14150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013022|IPR026040 Hydroxypyruvate isomerase-like|Xylose isomerase-like, TIM barrel domain G3DSA:3.20.20.150|PF01261|PIRSF006241|PTHR12110|PTHR12110:SF3|SSF51658 MEALZ_RS14160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR004358|IPR021796 Histidine kinase-like ATPase, C-terminal domain|Protein of unknown function DUF3365|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PF11845|PR00344|PTHR24423|PTHR24423:SF518|SM00387|SSF55874 MEALZ_RS14170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR006189|IPR013655 CHASE domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF03924|PF08447|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SM01079|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS14175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025392 Domain of unknown function DUF4124 PF13511 MEALZ_RS14180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021357 Protein of unknown function DUF2782 PF11191 MEALZ_RS14185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011989|IPR016024 Armadillo-like helical|Armadillo-type fold GO:0005488 G3DSA:1.25.10.10|PF13646|SSF48371 MEALZ_RS14190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007686|IPR026037 Phosphatidylglycerophosphatase A|YutG/PgpA domain GO:0006629|GO:0008962 PF04608|PIRSF006162|PTHR36305|SSF101307 MEALZ_RS14195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_02128|PF00586|PF02769|PIRSF005303|PTHR30270|PTHR30270:SF0|SSF55326|SSF56042|TIGR01379 MEALZ_RS14200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|PTHR11078|SSF48013|TIGR01951 MEALZ_RS14205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|PTHR21058|SSF52121|TIGR00114 MEALZ_RS14210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000422|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00180|PF00925|PF00926|PIRSF001259|PTHR21327|PTHR21327:SF6|SSF142695|SSF55821|TIGR00506 MEALZ_RS14215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|PTHR21098|SSF63380|TIGR00187 MEALZ_RS14220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002125|IPR002734|IPR004794|IPR011549|IPR016193|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD|Riboflavin-specific deaminase, C-terminal GO:0003824|GO:0008270|GO:0008703|GO:0008835|GO:0009231|GO:0050661|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|PTHR11079|PTHR11079:SF10|SSF53597|SSF53927|TIGR00227|TIGR00326 MEALZ_RS14225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003796|IPR005144 ATP-cone domain|Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MF_00440|PF03477|PTHR30455|PTHR30455:SF2|TIGR00244 MEALZ_RS14230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001775|IPR004846|IPR005644|IPR013356 GspD/PilQ family|NolW-like|Type II secretion system GspD|Type II/III secretion system GO:0008565|GO:0009306|GO:0015627|GO:0015628|GO:0019867 PF00263|PF03958|PR00811|PTHR30332|PTHR30332:SF0|TIGR02517 MEALZ_RS14240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007690|IPR014717 Translation elongation factor EF1B/ribosomal protein S6|Type II secretion system, protein M GO:0006858 G3DSA:3.30.70.60|PF10741 MEALZ_RS14245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005883|IPR007813 Fimbrial assembly PilN|Type IV pilus assembly protein PilM PF05137|PF11104|PTHR40278|PTHR40278:SF1|SSF53067 MEALZ_RS14255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13544|PS00409|SSF54523|TIGR02532 MEALZ_RS14260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13544|PTHR38779|PTHR38779:SF1|TIGR02532 MEALZ_RS14265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 PF12019|SSF54523 MEALZ_RS14275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000983|IPR010054|IPR012902|IPR013545 Bacterial general secretion pathway protein G-type pilin|General secretion pathway protein G|Prokaryotic N-terminal methylation site|Type II secretion system protein G GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF08334|PF13544|PR00813|PS00409|PTHR30093|PTHR30093:SF9|SSF54523|TIGR01710|TIGR02532 MEALZ_RS14280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003004|IPR018076 GspF/PilC family|Type II secretion system F domain PF00482|PR00812|PTHR30012|PTHR30012:SF0 MEALZ_RS14285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR003593|IPR007831|IPR013369|IPR027417 AAA+ ATPase domain|General secretory system II, protein E, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Type II secretion system GspE|Type II secretion system protein E GO:0005524|GO:0006810|GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PF05157|PS00662|PTHR30258|PTHR30258:SF2|SM00382|SSF160246|SSF52540|TIGR02533 MEALZ_RS14290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|PTHR12526|SSF53756 MEALZ_RS14295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009367 Mitochondrial fission protein ELM1-like PF06258|PTHR33986|SSF53756 MEALZ_RS14300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001503 Glycosyl transferase family 10 GO:0006486|GO:0008417|GO:0016020 PF00852|SSF53756 MEALZ_RS14305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029044 Nucleotide-diphospho-sugar transferases SSF53448 MEALZ_RS14315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007434|IPR016181 Acyl-CoA N-acyltransferase|Peptidogalycan biosysnthesis/recognition G3DSA:3.40.630.30|PF04339|PTHR31384|PTHR31384:SF26|SSF55729 MEALZ_RS14320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003660|IPR004089 HAMP domain|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020|GO:0016021 G3DSA:1.10.287.950|PF00015|PF00672|PTHR32089|SM00283|SM00304|SSF58104 MEALZ_RS14325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|SM00260|SSF50341 MEALZ_RS14330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207 CheW-like domain|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|PTHR22617|PTHR22617:SF20|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55874 MEALZ_RS14335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002645 STAS domain G3DSA:3.30.750.24|PF13466|PTHR35849|PTHR35849:SF2|SSF52091 MEALZ_RS14340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011009|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein kinase-like domain G3DSA:3.40.50.300|G3DSA:3.90.1200.10|PF13671|PTHR12083|PTHR12083:SF8|SSF52540|SSF56112 MEALZ_RS14350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107 Band 7 domain PF01145|SSF117892 MEALZ_RS14360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001932|IPR015655 PPM-type phosphatase domain|Protein phosphatase 2C family GO:0003824|GO:0004722|GO:0006470 G3DSA:3.60.40.10|PF00481|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606 MEALZ_RS14365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915 Peptidase M48 GO:0004222|GO:0006508 G3DSA:3.30.2010.10|PF01435|PTHR22726 MEALZ_RS14375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SM00327|SSF53300 MEALZ_RS14385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000253|IPR003439|IPR003593|IPR008984|IPR013525|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|ABC-2 type transporter|Forkhead-associated (FHA) domain|P-loop containing nucleoside triphosphate hydrolase|SMAD/FHA domain GO:0005515|GO:0005524|GO:0016020|GO:0016887 G3DSA:2.60.200.20|G3DSA:3.40.50.300|PF00005|PF00498|PF01061|PS00211|PTHR19241|PTHR19241:SF189|SM00240|SM00382|SSF49879|SSF52540 MEALZ_RS14390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001117|IPR002355|IPR008972|IPR011706|IPR011707|IPR033138 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 1|Multicopper oxidase, type 2|Multicopper oxidase, type 3|Multicopper oxidases, conserved site GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF00394|PF07731|PF07732|PS00079|PS00080|PTHR11709|PTHR11709:SF2|SSF49503 MEALZ_RS14395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009094|IPR012336|IPR018950 Disulphide bond isomerase, DsbC, N-terminal|Disulphide bond isomerase, DsbC/G, N-terminal|Thioredoxin-like fold G3DSA:3.10.450.70|G3DSA:3.40.30.10|PF10411|PF13098|PTHR35272|PTHR35272:SF3|SSF52833|SSF54423 MEALZ_RS14400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|PTHR22939|PTHR22939:SF78|SM00228|SSF50156|TIGR00054 MEALZ_RS14405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|PTHR30525|SSF51735|SSF55347|SSF69055|TIGR00243 MEALZ_RS14410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315|PTHR13773|PTHR13773:SF0 MEALZ_RS14415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|PTHR10291|SSF64005|TIGR00055 MEALZ_RS14420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|PTHR20982|SSF55194|TIGR00496 MEALZ_RS14425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|PTHR21499|PTHR21499:SF23|SSF53633|TIGR02075 MEALZ_RS14430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.286.20|G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01126|PTHR11741|SSF46934|SSF54713|TIGR00116 MEALZ_RS14435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:1.10.287.610|G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|PS00963|PTHR12534|SSF52313|TIGR01011 MEALZ_RS14440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24, methionine aminopeptidase|Peptidase M24, structural domain|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|PTHR10804|PTHR10804:SF75|SSF55920|TIGR00500 MEALZ_RS14445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002934|IPR003607|IPR006674|IPR010043|IPR013546 Bifunctional uridylyltransferase/uridylyl-removing enzyme|HD domain|HD/PDEase domain|PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase|Polymerase, nucleotidyl transferase domain GO:0006807|GO:0008773|GO:0016779 G3DSA:1.10.3210.10|G3DSA:3.30.460.10|G3DSA:3.30.70.260|MF_00277|PF01909|PF01966|PF08335|PIRSF006288|PTHR13734|PTHR13734:SF45|SM00471|SSF109604|SSF55021|SSF81301|SSF81593|TIGR01693 MEALZ_RS14450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF141371 MEALZ_RS14455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008972|IPR011707 Cupredoxin|Multicopper oxidase, type 3 GO:0005507 G3DSA:2.60.40.420|PF07732|PTHR11709|PTHR11709:SF2|SSF49503 MEALZ_RS14460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002938|IPR010971|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR13789|PTHR13789:SF233|SSF51905|TIGR01988 MEALZ_RS14465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002489|IPR002932|IPR006982|IPR013785|IPR017932|IPR029055 Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase, alpha subunit, C-terminal|Glutamate synthase, central-N|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal GO:0003824|GO:0006537|GO:0006807|GO:0008152|GO:0015930|GO:0016491|GO:0016638|GO:0055114 G3DSA:2.160.20.60|G3DSA:3.20.20.70|G3DSA:3.60.20.10|PF00310|PF01493|PF01645|PF04898|PTHR11938|PTHR11938:SF1|SSF51395|SSF56235|SSF69336 MEALZ_RS14470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001094|IPR001433|IPR001709|IPR003097|IPR008254|IPR010199|IPR017938|IPR023173|IPR029039 FAD-binding, type 1|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like domain|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel|Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0016491|GO:0019344|GO:0050660|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|PF00175|PF00258|PF00667|PIRSF000207|PR00369|PR00371|PTHR19384|SSF52218|SSF52343|SSF63380 MEALZ_RS14475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000330|IPR001650|IPR014001|IPR022737|IPR023949|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase recycling, bacterial, C-terminal|RNA polymerase-associated protein RapA|SNF2-related, N-terminal domain GO:0005524|GO:0006355|GO:0016817 G3DSA:3.40.50.300|MF_01821|PF00176|PF00271|PF12137|PTHR10799|PTHR10799:SF610|SM00487|SM00490|SSF52540 MEALZ_RS14485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004364|IPR004525|IPR018149|IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aminoacyl-tRNA synthetase, class II (D/K/N)-like|Elongation factor P--(R)-beta-lysine ligase|Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:3.30.930.10|PF00152|PR00982|PTHR22594|PTHR22594:SF7|SSF55681|TIGR00462 MEALZ_RS14490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|PTHR30053|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 MEALZ_RS14495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003739|IPR007197|IPR013785|IPR022462 Aldolase-type TIM barrel|Lysine-2,3-aminomutase-like|Lysine-2,3-aminomutase/glutamate 2,3-aminomutase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|PIRSF004911|PTHR30538|PTHR30538:SF1|SSF102114|TIGR00238|TIGR03821 MEALZ_RS14505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 PF06189|PTHR31367|PTHR31367:SF5 MEALZ_RS14510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007450 Lipoprotein SmpA/OmlA GO:0019867 PF04355 MEALZ_RS14515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004658 Outer membrane lipoprotein Slp GO:0019867 PF03843|PIRSF004982|PTHR37530 MEALZ_RS14520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR024671 Autophagy-related protein 22-like|Major facilitator superfamily domain G3DSA:1.20.1250.20|PF11700|PTHR23519|SSF103473 MEALZ_RS14530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|SSF52833 MEALZ_RS14535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13181|PF13432|PF14559|PTHR23083|SM00028|SSF48452 MEALZ_RS14545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032638 Putative bacterial porin PF16930|SSF56935 MEALZ_RS14550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653|TIGR01352 MEALZ_RS14555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF10 MEALZ_RS14560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898|IPR013320|IPR018765 Concanavalin A-like lectin/glucanase domain|Domain of unknown function DUF2341|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 G3DSA:2.60.120.200|PF01618|PF10102|PF13385|PTHR30625|PTHR30625:SF3|SSF49899 MEALZ_RS14565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:3.40.190.10 MEALZ_RS14570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000184|IPR013686 Bacterial surface antigen (D15)|Polypeptide-transport-associated, ShlB-type GO:0019867 G3DSA:2.40.160.50|G3DSA:3.10.20.310|PF01103|PF08479|PTHR34597|PTHR34597:SF1 MEALZ_RS14575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008638|IPR011050|IPR012334|IPR021026 Filamentous haemagglutinin family outer membrane protein, domain of unknown function DUF3739|Filamentous haemagglutinin, N-terminal|Pectin lyase fold|Pectin lyase fold/virulence factor G3DSA:2.160.20.10|PF05860|PF12545|PTHR12338|PTHR12338:SF6|SM00912|SSF51126|TIGR01901 MEALZ_RS14580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000601|IPR022409 PKD domain|PKD/Chitinase domain G3DSA:2.60.40.670|SM00089|SSF49299 MEALZ_RS14595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358|IPR014310|IPR021766 Histidine kinase-like ATPase, C-terminal domain|Protein of unknown function DUF3329|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphate regulon sensor PhoR|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF11808|PR00344|PTHR24423|PTHR24423:SF554|SM00387|SM00388|SSF47384|SSF55874|TIGR02966 MEALZ_RS14600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011879|IPR011991 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000156|GO:0000160|GO:0003677|GO:0006355|GO:0006817 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF576|SM00448|SM00862|SSF52172|TIGR02154 MEALZ_RS14605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025433 Domain of unknown function DUF4168 PF13767 MEALZ_RS14610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006680|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase GO:0016787 G3DSA:3.20.20.140|PF04909|SSF51556 MEALZ_RS14615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|PTHR11638|PTHR11638:SF18|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 MEALZ_RS14625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005546|IPR006315 Autotransporter beta-domain|Outer membrane autotransporter barrel GO:0019867 G3DSA:2.40.128.130|PF03797|SM00869|SSF103515|TIGR01414 MEALZ_RS14640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 MEALZ_RS14645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008490|IPR025668 Transposase DDE domain|Transposase InsH, N-terminal PF05598|PF13751|PTHR33408|PTHR33408:SF2 MEALZ_RS14650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011435 Protein of unknown function DUF1538 PF07556 MEALZ_RS14655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011435 Protein of unknown function DUF1538 PF07556 MEALZ_RS14660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002187|IPR011322|IPR015867 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|SM00938|SSF54913 MEALZ_RS14665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|PTHR11911:SF68|SM00116|SSF54631 MEALZ_RS14670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 MEALZ_RS14675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006652|IPR011043|IPR015915 Galactose oxidase/kelch, beta-propeller|Kelch repeat type 1|Kelch-type beta propeller GO:0005515 G3DSA:2.120.10.80|PF01344|PTHR24412|SM00612|SSF117281|SSF50965 MEALZ_RS14680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR30069|PTHR30069:SF13|SSF56935 MEALZ_RS14685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR020846|IPR029063 Major facilitator superfamily domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01564|PTHR11558|PTHR11558:SF4|SSF103473|SSF53335 MEALZ_RS14700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 MEALZ_RS14705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021253 Protein of unknown function DUF2796 PF10986 MEALZ_RS14710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021727 Protein of unknown function DUF3299 PF11736 MEALZ_RS14715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF578|SM00382|SSF52540 MEALZ_RS14720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30489|PTHR30489:SF2 MEALZ_RS14730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PTHR23083|SSF48452 MEALZ_RS14735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003538|IPR006260 Gram-negative bacterial TonB protein|TonB, C-terminal GO:0006810|GO:0015343|GO:0015891|GO:0030288|GO:0031992 G3DSA:3.30.1150.10|PF03544|PR01374|PTHR33446|PTHR33446:SF1|SSF74653|TIGR01352 MEALZ_RS14740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 MEALZ_RS14745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF0 MEALZ_RS14750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898|IPR017270 MotA/TolQ/ExbB proton channel|Putative MotA/TolQ/ExbB family protein GO:0006810|GO:0008565|GO:0016020 PF01618|PIRSF037714|PTHR30625|PTHR30625:SF0 MEALZ_RS14755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016866|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Uncharacterised conserved protein UCP028069 G3DSA:3.40.50.300|PF11932|PIRSF028069 MEALZ_RS14760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008972 Cupredoxin G3DSA:2.60.40.420|PF13386|PTHR42208|PTHR42208:SF1|SSF49503 MEALZ_RS14765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002020|IPR010953|IPR016142|IPR016143|IPR019810|IPR024176 Citrate synthase|Citrate synthase active site|Citrate synthase, bacterial-type|Citrate synthase, type I|Citrate synthase-like, large alpha subdomain|Citrate synthase-like, small alpha subdomain GO:0004108|GO:0005737|GO:0006099|GO:0046912 G3DSA:1.10.230.10|G3DSA:1.10.580.10|PF00285|PIRSF001369|PR00143|PS00480|PTHR11739|SSF48256|TIGR01798 MEALZ_RS14770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001030|IPR004406|IPR015928|IPR015929|IPR015931|IPR015932|IPR015933|IPR015937|IPR018136 Aconitase B|Aconitase B, HEAT-like domain|Aconitase B, N-terminal|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003994|GO:0005829|GO:0006099|GO:0008152|GO:0051539 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PF06434|PF11791|PIRSF036687|PS00450|PTHR11670|PTHR11670:SF39|SSF52016|SSF53732|SSF74778|TIGR00117 MEALZ_RS14775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001804|IPR019818|IPR024084 Isocitrate and isopropylmalate dehydrogenases family|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|PTHR11835|SM01329|SSF53659 MEALZ_RS14780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS14785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001018|IPR001279|IPR017782|IPR032282 Beta-lactamase, class-B, conserved site|Hydroxyacylglutathione hydrolase|Hydroxyacylglutathione hydrolase, C-terminal domain|Metallo-beta-lactamase GO:0004416|GO:0008270|GO:0008800|GO:0017001|GO:0019243 G3DSA:3.60.15.10|MF_01374|PF00753|PF16123|PIRSF005457|PS00743|PTHR11935|PTHR11935:SF7|SM00849|SSF56281|TIGR03413 MEALZ_RS14790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR000952|IPR012020|IPR029058 AB hydrolase 4 family|AB hydrolase 4, conserved site|Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF00561|PIRSF005211|PS01133|PTHR10794|SSF53474 MEALZ_RS14800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000629|IPR001650|IPR005580|IPR011545|IPR014001|IPR027417|IPR028618 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase DeaD|DEAD/DEAH box helicase domain|DbpA, RNA-binding domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000027|GO:0003676|GO:0004004|GO:0005524|GO:0070417 G3DSA:3.40.50.300|MF_00964|PF00270|PF00271|PF03880|PS00039|PTHR24031|PTHR24031:SF261|SM00487|SM00490|SSF52540 MEALZ_RS14805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006054|IPR006309|IPR012337|IPR013520 DNA polymerase 3, epsilon subunit|DNA polymerase III, epsilon subunit|Exonuclease, RNase T/DNA polymerase III|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003887|GO:0006260 G3DSA:3.30.420.10|PF00929|PTHR30231|PTHR30231:SF0|SM00479|SSF53098|TIGR00573|TIGR01406 MEALZ_RS14810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003140|IPR029058 Alpha/Beta hydrolase fold|Phospholipase/carboxylesterase/thioesterase GO:0016787 G3DSA:3.40.50.1820|PF02230|PTHR10655|SSF53474 MEALZ_RS14815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560|IPR032877 Transposase IS204/IS1001/IS1096/IS1165, DDE domain|Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain PF01610|PF13542|PTHR33498|PTHR33498:SF1 MEALZ_RS14825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H|Ribonuclease H domain|Ribonuclease H-like domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|PTHR10642|SSF53098 MEALZ_RS14830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 MEALZ_RS14835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000189|IPR008258|IPR018392|IPR023346 LysM domain|Lysozyme-like domain|Prokaryotic transglycosylase, active site|Transglycosylase SLT domain 1 GO:0000270|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:3.10.350.10|PF01464|PF01476|PS00922|PTHR21666|PTHR21666:SF206|SM00257|SSF53955|SSF54106 MEALZ_RS14840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF574|SM00382|SSF52540 MEALZ_RS14845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF2|SSF161098 MEALZ_RS14850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF24|SSF161098 MEALZ_RS14855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000914 Solute-binding protein family 5 domain G3DSA:3.10.105.10|G3DSA:3.90.76.10|PF00496|PTHR30290|SSF53850 MEALZ_RS14860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|PTHR24322|PTHR24322:SF317|SSF51735 MEALZ_RS14865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000297|IPR023058|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site|Trigger factor/SurA domain GO:0016853 G3DSA:3.10.50.40|PF00639|PF13624|PS01096|PTHR10657|PTHR10657:SF11|SSF109998|SSF54534 MEALZ_RS14880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|PTHR33175|SM00411|SSF47729 MEALZ_RS14885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008269|IPR014721|IPR015947|IPR020568|IPR027065|IPR027417|IPR027543 AAA+ ATPase domain|ATP-dependent protease La (LON), substrate-binding domain|ATPase, AAA-type, core|Lon protease|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163|GO:0043565 G3DSA:1.10.8.60|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PTHR10046|PTHR10046:SF43|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 MEALZ_RS14890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|PTHR11262|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 MEALZ_RS14895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001907|IPR018215|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|PTHR10381|PTHR10381:SF22|SSF52096|TIGR00493 MEALZ_RS14900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001179|IPR005215|IPR008880|IPR008881|IPR027304 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.10.50.40|G3DSA:3.30.70.1050|MF_00303|PF00254|PF05697|PF05698|PIRSF003095|PTHR30560|PTHR30560:SF3|SSF102735|SSF109998|SSF54534|TIGR00115 MEALZ_RS14910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS14915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002078|IPR003018|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417|IPR029016 AAA+ ATPase domain|GAF domain|GAF domain-like|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005515|GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.40|G3DSA:3.40.50.300|PF00158|PF01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF35|SM00382|SSF46689|SSF52540|SSF55781 MEALZ_RS14930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004638|IPR011701|IPR020846 Drug resistance transporter EmrB/QacA subfamily|Major facilitator superfamily|Major facilitator superfamily domain GO:0006810|GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR23501|PTHR23501:SF52|SSF103473|TIGR00711 MEALZ_RS14935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|G3DSA:2.20.200.10|PF02321|PTHR30203|PTHR30203:SF6|SSF56954|TIGR01845 MEALZ_RS14940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF00529|PF16576|PTHR30386|PTHR30386:SF6|SSF111369 MEALZ_RS14945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:1.10.300.10|G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|PTHR11846|SM00788|SSF52540|TIGR00184 MEALZ_RS14950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004516|IPR004517 ATP phosphoribosyltransferase regulatory subunit|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 G3DSA:3.30.930.10|MF_00125|PF13393|PIRSF001549|PTHR11476|PTHR11476:SF5|SSF55681|TIGR00443 MEALZ_RS14955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972|IPR010200 Band 7 domain|HflC|Stomatin family GO:0016020|GO:0016021|GO:0052547 PF01145|PIRSF005651|PR00721|PTHR10264|PTHR10264:SF80|SM00244|SSF117892|TIGR01932 MEALZ_RS14960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972|IPR010201|IPR020980 Band 7 domain|HflK|Menbrane protein HflK, N-terminal|Stomatin family GO:0016020|GO:0016021 PF01145|PF12221|PTHR10264|PTHR10264:SF51|SM00244|SSF117892|TIGR01933 MEALZ_RS14965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR016496|IPR025121|IPR027417|IPR032305 GTP binding domain|GTP-binding protein, middle domain|GTPase HflX|GTPase HflX, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00900|PF01926|PF13167|PF16360|PIRSF006809|PR00326|PTHR10229|PTHR10229:SF0|SSF52540|TIGR03156 MEALZ_RS14970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005001|IPR010920 LSM domain|RNA-binding protein Hfq GO:0003723|GO:0006355 G3DSA:2.30.30.100|MF_00436|PTHR34772|PTHR34772:SF1|SSF50182|TIGR02383 MEALZ_RS14980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000073|IPR000639|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1|Epoxide hydrolase-like GO:0003824 G3DSA:3.40.50.1820|PF00561|PR00111|PR00412|PTHR10992|PTHR10992:SF768|SSF53474 MEALZ_RS14985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR38568|PTHR38568:SF2 MEALZ_RS14990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004792|IPR023166|IPR023753 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like|FAD/NAD(P)-binding domain|HI0933 insert-like domain GO:0016491|GO:0055114 G3DSA:1.10.8.260|G3DSA:2.40.30.10|G3DSA:3.50.50.60|PF03486|PR00368|PR00411|PTHR10617|PTHR10617:SF103|SSF160996|SSF51905|TIGR00275 MEALZ_RS15000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR013468|IPR020948 Conserved hypothetical protein CHP02647|Phosphate-starvation-induced PsiE-like|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF06146|TIGR02647 MEALZ_RS15005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal PF04413|PTHR23417|PTHR23417:SF2|SSF53756 MEALZ_RS15015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005254|IPR010817|IPR011990|IPR019734 HemY, N-terminal|Heme biosynthesis-associated TPR protein|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0016020|GO:0042168 G3DSA:1.25.40.10|PF07219|PF13181|SM00028|SSF48452|TIGR00540 MEALZ_RS15020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX PF04375|PTHR38043 MEALZ_RS15025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 G3DSA:3.40.50.10090|PF02602|PTHR38042|PTHR38042:SF1|SSF69618 MEALZ_RS15030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|PTHR11557|SSF53850|SSF54782|TIGR00212 MEALZ_RS15035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|PTHR11444|PTHR11444:SF3|SSF48557|TIGR00838 MEALZ_RS15040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000274|IPR024685 Adenylate cyclase class-I, N-terminal domain|Adenylate cyclase, class-I GO:0004016|GO:0006171 G3DSA:3.30.460.10|PF01295|PF12633|PIRSF001444|PTHR38760 MEALZ_RS15045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|SSF141371 MEALZ_RS15050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018389|IPR026289 Solute binding protein, mannitol/chloroaromatic system-like|TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 PF03480|PIRSF039026|PTHR33376|PTHR33376:SF5|SSF53850 MEALZ_RS15055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|PTHR10836|PTHR10836:SF50|SM00846|SSF51735|SSF55347|TIGR01534 MEALZ_RS15060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001697|IPR011037|IPR015793|IPR015794|IPR015795|IPR015806|IPR015813|IPR018209 Pyruvate kinase|Pyruvate kinase, C-terminal|Pyruvate kinase, active site|Pyruvate kinase, alpha/beta|Pyruvate kinase, barrel|Pyruvate kinase, beta-barrel insert domain|Pyruvate kinase-like, insert domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0000287|GO:0003824|GO:0004743|GO:0006096|GO:0030955 G3DSA:2.40.33.10|G3DSA:3.20.20.60|G3DSA:3.40.1380.20|PF00224|PF02887|PR01050|PS00110|PTHR11817|PTHR11817:SF17|SSF50800|SSF51621|SSF52935|TIGR01064 MEALZ_RS15065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116|PTHR21624|PTHR21624:SF2 MEALZ_RS15070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610 PAC motif|PAS domain G3DSA:3.30.450.20|PF13426|PTHR24351|SM00086|SM00091|SSF55785|TIGR00229 MEALZ_RS15075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF55961 MEALZ_RS15080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610 PAC motif|PAS domain G3DSA:3.30.450.20|PF13426|PTHR24351|SM00086|SM00091|SSF55785|TIGR00229 MEALZ_RS15085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|SSF55961 MEALZ_RS15090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001241|IPR002288|IPR003594|IPR005737|IPR006171|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA topoisomerase IV, subunit B, Gram-negative|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Toprim domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_00938|PF00204|PF00986|PF01751|PF02518|PR00418|PR01098|PS00177|PTHR10169|PTHR10169:SF45|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01055 MEALZ_RS15095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PIRSF006488|PTHR34137|SSF116842|TIGR01280 MEALZ_RS15100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|PTHR12001|PTHR12001:SF23|SSF48576 MEALZ_RS15105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|PTHR11624|PTHR11624:SF20|SM00861|SSF52518|SSF52922|TIGR00204 MEALZ_RS15110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR005764|IPR029057 Adenine phosphoribosyl transferase|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0003999|GO:0005737|GO:0006168|GO:0009116 G3DSA:3.40.50.2020|MF_00004|PF00156|PTHR32315|SSF53271|TIGR01090 MEALZ_RS15115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805|PTHR30035|PTHR30035:SF3 MEALZ_RS15120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008869|IPR017842|IPR023094|IPR032710 Hopanoid biosynthesis-associated membrane protein HpnM|NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649|PTHR36573|TIGR03481 MEALZ_RS15125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007197|IPR013785|IPR017833|IPR022563 Aldolase-type TIM barrel|Domain of unknown function DUF3463|Hopanoid biosynthesis associated radical SAM protein HpnH|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF11946|PTHR11228|PTHR11228:SF22|SSF102114|TIGR03470 MEALZ_RS15130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002060|IPR008949 Isoprenoid synthase domain|Squalene/phytoene synthase GO:0009058|GO:0016740 G3DSA:1.10.600.10|PF00494|PTHR11626|PTHR11626:SF4|SSF48576 MEALZ_RS15135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006400|IPR008930|IPR018333|IPR032696|IPR032697 Squalene cyclase|Squalene cyclase, C-terminal|Squalene cyclase, N-terminal|Squalene hopene cyclase|Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid GO:0016866|GO:0019746 G3DSA:1.50.10.20|PF13243|PF13249|PTHR11764|PTHR11764:SF12|SSF48239|TIGR01507|TIGR01787 MEALZ_RS15140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000845|IPR017831 Hopanoid-associated phosphorylase HpnG|Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PF01048|SSF53167|TIGR03468 MEALZ_RS15145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004869|IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN|Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|PTHR33406|SSF82866|TIGR03480 MEALZ_RS15150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF15|SSF53383 MEALZ_RS15155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|PTHR34009|PTHR34009:SF1|SSF53335|TIGR01444 MEALZ_RS15165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001486|IPR009050|IPR012292 Globin-like|Globin/Protoglobin|Truncated hemoglobin GO:0019825|GO:0020037 G3DSA:1.10.490.10|PF01152|SSF46458 MEALZ_RS15170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006214 Bax inhibitor 1-related PF01027|PTHR23291|PTHR23291:SF37 MEALZ_RS15180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01196|PTHR17224|PTHR17224:SF1|SSF53178|TIGR00447 MEALZ_RS15185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR002550|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Domain of unknown function DUF21|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF01595|PF03471|PTHR22777|SM00116|SM01091|SSF54631|SSF56176 MEALZ_RS15190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000253|IPR008984|IPR032030 Forkhead-associated (FHA) domain|SMAD/FHA domain|YscD, cytoplasmic domain GO:0005515 G3DSA:2.60.200.20|PF16697|SSF49879 MEALZ_RS15195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875|IPR027021 Cyclic di-GMP binding protein, PA4608 type|PilZ domain GO:0035438 G3DSA:2.40.10.220|PF07238|PIRSF028141|SSF141371 MEALZ_RS15200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF13481|PF13541|PR01874|PTHR32472|SM00382|SSF52540|SSF54211|TIGR00416 MEALZ_RS15205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF600|SM00448|SM00862|SSF46894|SSF52172 MEALZ_RS15215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002142|IPR004635|IPR029045 ClpP/crotonase-like domain|Peptidase S49|Peptidase S49, SppA GO:0006508|GO:0008233 G3DSA:3.90.226.10|PF01343|PTHR30341|PTHR30341:SF1|SSF52096|TIGR00706 MEALZ_RS15220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF40|SSF56784|TIGR01549 MEALZ_RS15225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002942|IPR006145|IPR006224|IPR006225|IPR020103 Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.10.290.10|PF00849|PF01479|PS01129|PTHR11079|PTHR11079:SF84|SM00363|SSF55120|SSF55174|TIGR00005 MEALZ_RS15230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967|IPR028878 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396|GO:0008995 G3DSA:2.40.50.140|MF_00970|PF00575|PF10150|PTHR30001|PTHR30001:SF1|SM00316|SSF50249|TIGR00757 MEALZ_RS15245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR012340|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|Nucleic acid-binding, OB-fold|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|PTHR32294|PTHR32294:SF0|SM00481|SSF89550|TIGR00594 MEALZ_RS15250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001352|IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII|Ribonuclease HII/HIII domain GO:0003676|GO:0003723|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|PTHR10954|SSF53098 MEALZ_RS15255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR010137|IPR011004|IPR018357|IPR029098 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like|Udp N-acetylglucosamine O-acyltransferase, C-terminal GO:0008610|GO:0008780|GO:0016740 G3DSA:1.20.1180.10|G3DSA:2.160.10.10|MF_00387|PF00132|PF13720|PIRSF000456|PS00101|PTHR23416|PTHR23416:SF8|SSF51161|TIGR01852 MEALZ_RS15260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|PTHR30272|SSF54637|TIGR01750 MEALZ_RS15265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|PIRSF002094|PTHR35089|PTHR35089:SF1|SM00935|SSF111384 MEALZ_RS15270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|Surface antigen variable number GO:0019867|GO:0071709 G3DSA:2.40.160.50|MF_01430|PF01103|PF07244|PIRSF006076|PTHR12815|PTHR12815:SF11|TIGR03303 MEALZ_RS15275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005654|IPR027417 ATPase, AFG1-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF03969|PTHR12169|SSF52540 MEALZ_RS15280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002711|IPR003615 HNH endonuclease|HNH nuclease GO:0003676|GO:0004519 PF01844|SM00507 MEALZ_RS15285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR005946|IPR029057|IPR029099 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009116|GO:0009165 G3DSA:3.40.50.2020|PF00156|PF13793|PTHR10210|PTHR10210:SF32|SM01400|SSF53271|TIGR01251 MEALZ_RS15290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000053|IPR000312|IPR013102|IPR013466|IPR017459|IPR017872|IPR028579 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3|Putative thymidine phosphorylase|Pyrimidine nucleoside phosphorylase, C-terminal|Pyrimidine-nucleoside phosphorylase, conserved site|Thymidine phosphorylase/AMP phosphorylase|Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206|GO:0006213|GO:0008152|GO:0016757|GO:0016763 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|G3DSA:3.90.1170.30|MF_00703|PF00591|PF02885|PF07831|PS00647|PTHR10515|PTHR10515:SF0|SM00941|SSF47648|SSF52418|SSF54680|TIGR02645 MEALZ_RS15295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015414|IPR032816 SNARE associated Golgi protein|Transmembrane protein TMEM64/TMEM41 GO:0016021 PF09335|PTHR12677 MEALZ_RS15300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|PTHR26402:SF586|SM00448|SSF52172 MEALZ_RS15305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004089|IPR004090 Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PR00260|PTHR32089|PTHR32089:SF1|SM00283|SSF58104 MEALZ_RS15310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000780|IPR022641|IPR022642|IPR026024|IPR029063 Chemotaxis protein methyltransferase CheR|Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|S-adenosyl-L-methionine-dependent methyltransferase GO:0008757 G3DSA:1.10.155.10|G3DSA:3.40.50.150|PF01739|PF03705|PIRSF000410|PR00996|PTHR24422|PTHR24422:SF13|SM00138|SSF47757|SSF53335 MEALZ_RS15315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005659|IPR011324 Chemoreceptor glutamine deamidase CheD|Cytotoxic necrotizing factor-like, catalytic GO:0006935|GO:0050568 MF_01440|PF03975|PTHR35147|PTHR35147:SF1|SSF64438 MEALZ_RS15320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF4|SM00448|SSF52172|SSF52738 MEALZ_RS15325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|PTHR18895|PTHR18895:SF60|SSF53335|TIGR00095 MEALZ_RS15330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PTHR11851|PTHR11851:SF140|SSF63411 MEALZ_RS15335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001431|IPR007863|IPR011237|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16 domain|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16, zinc-binding site GO:0003824|GO:0004222|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PS00143|PTHR11851|PTHR11851:SF136|SSF63411 MEALZ_RS15340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000537|IPR006369 Protohaem IX farnesyltransferase|UbiA prenyltransferase family GO:0004659|GO:0008495|GO:0016021|GO:0048034 MF_00154|PF01040|PTHR11048|PTHR11048:SF3|TIGR01473 MEALZ_RS15345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000312|IPR017459 Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|PF00591|PF02885|SSF47648|SSF52418 MEALZ_RS15350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009875 PilZ domain GO:0035438 PF07238|SSF141371 MEALZ_RS15355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008258|IPR023346 Lysozyme-like domain|Transglycosylase SLT domain 1 G3DSA:1.10.530.10|PF01464|SSF53955 MEALZ_RS15360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000774|IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type|Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 G3DSA:3.10.50.40|PF00254|PF01346|PTHR10516|PTHR10516:SF320|SSF54534 MEALZ_RS15365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021244 Protein of unknown function DUF2802 PF10975 MEALZ_RS15370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 G3DSA:2.30.30.40|G3DSA:2.40.50.180|PF01584|PTHR22617|PTHR22617:SF26|SM00260|SSF50341 MEALZ_RS15375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 PF01584|SSF50341 MEALZ_RS15380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF69|SSF52540 MEALZ_RS15385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665|IPR025713 Motility protein B, N-terminal domain|OmpA-like domain G3DSA:3.30.1330.60|PF00691|PF13677|PR01023|PTHR30329|PTHR30329:SF4|SSF103088 MEALZ_RS15390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898|IPR022522 Flagellar motor stator, MotA|MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30433|PTHR30433:SF3 MEALZ_RS15395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000673|IPR001789|IPR008248|IPR011006 CheY-like superfamily|Signal transduction response regulator, chemotaxis, CheB|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase|Signal transduction response regulator, receiver domain GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 G3DSA:3.40.50.180|G3DSA:3.40.50.2300|MF_00099|PF00072|PF01339|PIRSF000876|PTHR24421|PTHR24421:SF16|SM00448|SSF52172|SSF52738 MEALZ_RS15400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002545|IPR003594|IPR003661|IPR004105|IPR004358|IPR008207|IPR018247 CheW-like domain|EF-Hand 1, calcium-binding site|Histidine kinase CheA-like, homodimeric domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0004871|GO:0005737|GO:0006935|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.560|G3DSA:1.20.120.160|G3DSA:2.30.30.40|G3DSA:2.40.50.180|G3DSA:3.30.565.10|PF01584|PF01627|PF02518|PF02895|PR00344|PS00018|PTHR22617|PTHR22617:SF6|SM00073|SM00260|SM00387|SM01231|SSF47226|SSF47384|SSF50341|SSF55874 MEALZ_RS15405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 G3DSA:1.10.287.500|PF04344|PIRSF002884|PTHR22617|PTHR22617:SF35|SSF75708 MEALZ_RS15410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 MEALZ_RS15420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000943|IPR007624|IPR007627|IPR007630|IPR011991|IPR012845|IPR013324|IPR013325|IPR014284|IPR016263|IPR028617 RNA polymerase sigma factor FliA|RNA polymerase sigma factor, FliA/WhiG|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|RNA polymerase sporulation-specific sigma factor|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006351|GO:0006352|GO:0006355|GO:0016987|GO:0030435 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00962|PF04539|PF04542|PF04545|PIRSF000770|PR00046|PS00715|PTHR30385|PTHR30385:SF7|SSF88659|SSF88946|TIGR02479|TIGR02937 MEALZ_RS15425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002586|IPR025501|IPR027417 ATP binding protein MinD|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF01656|PIRSF003092|PTHR13696|PTHR13696:SF3|SSF52540 MEALZ_RS15430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000897|IPR003593|IPR020006|IPR027417 AAA+ ATPase domain|Flagellar biosynthesis protein FlhF|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain GO:0003924|GO:0005525|GO:0006614|GO:0044781 G3DSA:3.40.50.300|PF00448|PTHR11564|PTHR11564:SF3|SM00382|SM00962|SSF52540|TIGR03499 MEALZ_RS15435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001712|IPR006301|IPR025505 FHIPEP conserved site|Flagellar biosynthesis protein FlhA|Type III secretion system FHIPEP GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF00771|PIRSF005419|PR00949|PS00994|PTHR30161|PTHR30161:SF1|TIGR01398 MEALZ_RS15440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006135|IPR006136|IPR029025 Flagellar biosynthetic protein FlhB|Type III secretion system substrate exporter|Type III secretion system substrate exporter, C-terminal GO:0009306|GO:0015031|GO:0016020|GO:0016021|GO:0044780 G3DSA:3.40.1690.10|PF01312|PR00950|PTHR30531|PTHR30531:SF4|SSF160544|TIGR00328 MEALZ_RS15445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002010|IPR006303 Flagellar biosynthesis protein FliR|Type III secretion system inner membrane R protein GO:0006605|GO:0016020|GO:0016021|GO:0044780 PF01311|PR00953|PTHR30065|PTHR30065:SF1|TIGR01400 MEALZ_RS15450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002191|IPR006305 Bacterial export protein family 3|Flagellar biosynthesis protein FliQ GO:0009306|GO:0016020|GO:0016021|GO:0044780 PF01313|PIRSF004669|PR00952|PTHR34040|PTHR34040:SF2|TIGR01402 MEALZ_RS15455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005837|IPR005838 Flagellar transport protein FliP|Type III secretion system inner membrane P protein GO:0009306|GO:0016020 PF00813|PR00951|PR01302|PS01060|PS01061|PTHR30587|PTHR30587:SF0|TIGR01103 MEALZ_RS15460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 PF04347|TIGR03500 MEALZ_RS15465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001172|IPR001543|IPR012826 Flagellar motor switch FliN|Flagellar motor switch FliN/Type III secretion HrcQb|Surface presentation of antigen (SpoA) GO:0003774|GO:0006935|GO:0009288|GO:0009425|GO:0016020|GO:0071973 G3DSA:2.30.330.10|PF01052|PR00956|PTHR22617|SSF101801|TIGR02480 MEALZ_RS15470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001543|IPR001689|IPR028976 CheC-like domain|Flagellar motor switch protein FliM|Surface presentation of antigen (SpoA) GO:0003774|GO:0009425|GO:0071973 G3DSA:2.30.330.10|PF01052|PF02154|PIRSF002888|PR00955|PTHR30034|PTHR30034:SF0|SSF101801|SSF103039|TIGR01397 MEALZ_RS15475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748|PTHR35091|PTHR35091:SF1 MEALZ_RS15480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 MEALZ_RS15485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018705 Domain of unknown function DUF2134, membrane PF09977 MEALZ_RS15490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022053 Protein of unknown function DUF3613 PF12266 MEALZ_RS15495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SM00028|SSF48452 MEALZ_RS15500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF2 MEALZ_RS15505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018076 Type II secretion system F domain PF00482|PTHR35007|PTHR35007:SF1 MEALZ_RS15510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001482|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Type II secretion system protein E GO:0005524|GO:0006810 G3DSA:3.30.450.90|G3DSA:3.40.50.300|PF00437|PTHR30258|PTHR30258:SF3|SSF52540 MEALZ_RS15515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011006|IPR027417|IPR031580 CheY-like superfamily|P-loop containing nucleoside triphosphate hydrolase|Pilus assembly protein TadZ, N-terminal G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF16968|SSF52172|SSF52540 MEALZ_RS15520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001775|IPR004846|IPR032789 GspD/PilQ family|Pilus formation protein, N-terminal|Type II/III secretion system GO:0009306 PF00263|PF13629|PR00811|PTHR30332|PTHR30332:SF1 MEALZ_RS15525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006190|IPR013974|IPR017592|IPR031571 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal|Flp pilus assembly protein RcpC/CpaB domain|Pilus assembly, Flp-type CpaB|SAF domain G3DSA:3.90.1210.10|PF08666|PF16976|SM00858|SSF51269|TIGR03177 MEALZ_RS15530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012495 TadE-like PF07811 MEALZ_RS15535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 PF01478 MEALZ_RS15540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007047 Flp/Fap pilin component PF04964 MEALZ_RS15545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 PF01235|PR00175|PTHR30330|PTHR30330:SF3|TIGR00835 MEALZ_RS15555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002059|IPR011129|IPR012156|IPR012340|IPR019844 Cold shock protein|Cold shock, CspA|Cold-shock conserved site|Cold-shock protein, DNA-binding|Nucleic acid-binding, OB-fold GO:0003676|GO:0003677|GO:0006355 G3DSA:2.40.50.140|PF00313|PIRSF002599|PR00050|PS00352|PTHR11544|SM00357|SSF50249 MEALZ_RS15565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008312|IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath|Type VI secretion system, VipA, VC_A0107 or Hcp2 PF05591|PF05943|PTHR35565|PTHR35565:SF3 MEALZ_RS15570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011758|IPR013815|IPR013816 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Alpha-L-glutamate ligase-related protein GO:0003824|GO:0005524 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|PF14397|SSF56059|TIGR02291 MEALZ_RS15575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025838|IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase|Inactive transglutaminase fused to 7 transmembrane helices PF14400|PF14402 MEALZ_RS15580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021109 Aspartic peptidase domain G3DSA:2.40.70.10|PF05618|PTHR38037|SSF50630 MEALZ_RS15585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|PF00849|PF01479|PS01149|PTHR21600|PTHR21600:SF2|SM00363|SSF55120|SSF55174|TIGR00093 MEALZ_RS15590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005234|IPR011991 Chromosome segregation/condensation protein ScpB|Winged helix-turn-helix DNA-binding domain GO:0051304 G3DSA:1.10.10.10|PF04079|PIRSF019345|PTHR34298|PTHR34298:SF2|SSF46785|TIGR00281 MEALZ_RS15595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003768 Segregation and condensation protein A MF_01805|PF02616|PTHR33969|PTHR33969:SF2 MEALZ_RS15600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR22939|PTHR22939:SF104 MEALZ_RS15605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|PTHR17490|PTHR17490:SF7|SSF55821|TIGR00057 MEALZ_RS15610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 G3DSA:3.30.420.40|PF00814|PTHR11735|PTHR11735:SF11|SSF53067|TIGR03725 MEALZ_RS15615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006554|IPR006555|IPR010614|IPR011545|IPR014001|IPR027417 ATP-dependent helicase, C-terminal|DEAD/DEAH box helicase domain|DEAD2|Helicase superfamily 1/2, ATP-binding domain|Helicase-like, DEXD box c2 type|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0003677|GO:0004003|GO:0005524|GO:0006139|GO:0008026|GO:0016818 G3DSA:3.40.50.300|PF00270|PF06733|PF13307|PTHR11472|PTHR11472:SF37|SM00487|SM00488|SM00491|SSF52540 MEALZ_RS15620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001451|IPR007691|IPR011004|IPR020573 Hexapeptide repeat|Trimeric LpxA-like|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD|UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016410|GO:0016747 G3DSA:2.160.10.10|MF_00523|PF00132|PF04613|PTHR22572|PTHR22572:SF117|SSF51161|TIGR01853 MEALZ_RS15625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF154|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 MEALZ_RS15630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012548|IPR012656 Conserved hypothetical protein CHP02421, QEGLA|Protein of unknown function DUF1704 PF08014|PTHR31817|PTHR31817:SF4|SM01154|TIGR02421 MEALZ_RS15635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649|PTHR36573 MEALZ_RS15640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 G3DSA:3.30.70.260|PF13740|PIRSF028103|PTHR34875|PTHR34875:SF3|SSF55021 MEALZ_RS15645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PIRSF000239|PTHR10681|SSF52833 MEALZ_RS15650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR003714|IPR027417|IPR029060 P-loop containing nucleoside triphosphate hydrolase|PIN domain|PIN domain-like|PhoH-like protein GO:0005524 G3DSA:3.40.50.1010|G3DSA:3.40.50.300|PF02562|PF13638|PTHR30473|PTHR30473:SF2|SM00670|SSF52540|SSF88723 MEALZ_RS15655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594|PTHR21716|PTHR21716:SF19 MEALZ_RS15660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004193|IPR006047|IPR011837|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 Glycogen debranching enzyme, GlgX type|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0004133|GO:0004553|GO:0005975|GO:0005980 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|PF00128|PF02922|PTHR10357|PTHR10357:SF74|SM00642|SSF51011|SSF51445|SSF81296|TIGR02100 MEALZ_RS15670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001915|IPR011990|IPR030873 Beta-barrel assembly-enhancing protease|Peptidase M48|Tetratricopeptide-like helical domain GO:0004222|GO:0005515|GO:0006508|GO:0008237|GO:0016020|GO:0061077 G3DSA:1.25.40.10|G3DSA:3.30.2010.10|MF_00997|PF01435|PF14559|PTHR22726|PTHR22726:SF10|SSF48452 MEALZ_RS15675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011041|IPR011042|IPR012938 Glucose/Sorbosone dehydrogenase|Six-bladed beta-propeller, TolB-like|Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824|GO:0005975|GO:0016901|GO:0048038 G3DSA:2.120.10.30|PF07995|PTHR19328|SSF50952 MEALZ_RS15680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021109 Aspartic peptidase domain G3DSA:2.40.70.10|PF05618|PTHR38037|SSF50630 MEALZ_RS15685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PTHR15157|PTHR15157:SF11|SSF56784 MEALZ_RS15690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PTHR11117|PTHR11117:SF2|SM00881|SSF51735|SSF52210|TIGR01019 MEALZ_RS15695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|PTHR11815:SF1|SSF52210|SSF56059|TIGR01016 MEALZ_RS15700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005000|IPR011206|IPR015813 Citrate lyase beta subunit-like|HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|PIRSF015582|PTHR32308|PTHR32308:SF2|SSF51621 MEALZ_RS15710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR024169 Aminotransferase class V domain|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PTHR21152|PTHR21152:SF21|SSF53383 MEALZ_RS15715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006139|IPR006140|IPR016040 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PTHR10996|SSF51735|SSF52283 MEALZ_RS15720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001236|IPR001557|IPR010945|IPR015955|IPR016040|IPR022383 L-lactate/malate dehydrogenase|Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal|Lactate/malate dehydrogenase, C-terminal|Lactate/malate dehydrogenase, N-terminal|Malate dehydrogenase, type 2|NAD(P)-binding domain GO:0003824|GO:0005975|GO:0006108|GO:0016491|GO:0016615|GO:0016616|GO:0019752|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.90.110.10|MF_01517|PF00056|PF02866|PIRSF000102|PTHR23382|SSF51735|SSF56327|TIGR01759 MEALZ_RS15725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015259|IPR016040 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal|NAD(P)-binding domain G3DSA:3.40.50.10280|G3DSA:3.40.50.720|PF09176|SSF51735|SSF53223 MEALZ_RS15730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007835|IPR025286 MOFRL domain|MOFRL-associated domain G3DSA:3.40.1480.10|G3DSA:3.40.50.10180|PF05161|PF13660|PTHR12227|PTHR12227:SF0|SSF82544 MEALZ_RS15735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006544|GO:0006563|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|PTHR11680|PTHR11680:SF9|SSF53383 MEALZ_RS15740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000559|IPR020628|IPR027417 Formate-tetrahydrofolate ligase, FTHFS|Formate-tetrahydrofolate ligase, FTHFS, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0004329|GO:0005524|GO:0009396 G3DSA:3.10.410.10|G3DSA:3.30.1510.10|G3DSA:3.40.50.300|MF_01543|PF01268|PS00721|PS00722|PTHR10025|SSF52540 MEALZ_RS15745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS15750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|PTHR22573|PTHR22573:SF18|SSF53738|SSF55957 MEALZ_RS15765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR39431 MEALZ_RS15770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002065|IPR012336|IPR013740|IPR018219 Putative thiol peroxidase Tpx|Redoxin|Thiol peroxidase conserved site|Thioredoxin-like fold GO:0008379|GO:0016209|GO:0016491|GO:0016684|GO:0055114 G3DSA:3.40.30.10|MF_00269|PF08534|PS01265|PTHR10681|PTHR10681:SF81|SSF52833 MEALZ_RS15775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000257|IPR006361 Uroporphyrinogen decarboxylase (URO-D)|Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 G3DSA:3.20.20.210|MF_00218|PF01208|PS00906|PS00907|PTHR21091|PTHR21091:SF2|SSF51726|TIGR01464 MEALZ_RS15780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 MEALZ_RS15785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016037|IPR030960|IPR030963 3-dehydroquinate synthase AroB|3-dehydroquinate synthase domain|3-dehydroquinate synthase family GO:0003856|GO:0005737|GO:0009073|GO:0016838 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|MF_00110|PF01761|PIRSF001455|PTHR21090|PTHR21090:SF13|SSF56796|TIGR01357 MEALZ_RS15790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000623|IPR023000|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase, conserved site|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|PS01128|PTHR21087|SSF52540 MEALZ_RS15795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001775|IPR004846|IPR005644|IPR011662|IPR013355|IPR021731 AMIN domain|GspD/PilQ family|NolW-like|Secretin/TonB, short N-terminal domain|Type II/III secretion system|Type IV pilus secretin PilQ GO:0009297|GO:0009306|GO:0019867 PF00263|PF03958|PF11741|PR00811|PTHR30604|SM00965|TIGR02515 MEALZ_RS15800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007446 Pilus assembly protein PilP PF04351|PIRSF016481 MEALZ_RS15805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007445|IPR014717|IPR023218 Pilus assembly protein, PilO|Translation elongation factor EF1B/ribosomal protein S6|UPF0291 structural domain G3DSA:1.10.287.540|G3DSA:3.30.70.60|PF04350|PIRSF016482|PTHR39555|PTHR39555:SF1 MEALZ_RS15810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007813 Fimbrial assembly PilN PF05137|PTHR40278|PTHR40278:SF1 MEALZ_RS15815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003494|IPR005883 SHS2 domain inserted in FtsA|Type IV pilus assembly protein PilM GO:0005515|GO:0007049 G3DSA:3.30.420.40|PF11104|PIRSF019169|PTHR32432|PTHR32432:SF3|SM00842|SSF53067|TIGR01175 MEALZ_RS15820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001264|IPR001460|IPR012338|IPR012340|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Nucleic acid-binding, OB-fold|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:2.40.50.140|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|PTHR32282|PTHR32282:SF5|SSF53955|SSF56601|TIGR02074 MEALZ_RS15830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase G3DSA:3.10.180.10 MEALZ_RS15835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819 MEALZ_RS15840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF14559|SM00028|SSF48452 MEALZ_RS15845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008775|IPR012774 Ectoine dioxygenase|Phytanoyl-CoA dioxygenase GO:0016706|GO:0055114 G3DSA:2.60.120.620|PF05721|PTHR20883|PTHR20883:SF0|SSF51197|TIGR02408 MEALZ_RS15850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001048|IPR027795 Aspartate/glutamate/uridylate kinase|GATS-like ACT domain G3DSA:3.40.1160.10|PF00696|PF13840|PTHR21499|PTHR21499:SF3|SSF53633|SSF55021 MEALZ_RS15855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010462|IPR011051|IPR014710 Ectoine synthase|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0019491|GO:0033990 G3DSA:2.60.120.10|MF_01255|PD080544|PF06339|PTHR39289|PTHR39289:SF1|SSF51182 MEALZ_RS15860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004637|IPR005814|IPR012773|IPR015421|IPR015422|IPR015424 2,4-diaminobutyrate 4-transaminase|Aminotransferase class-III|Ectoine biosynthetic protein|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0009058|GO:0019491|GO:0030170|GO:0047307 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF61|SSF53383|TIGR00709|TIGR02407 MEALZ_RS15865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR012772|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|L-2,4-diaminobutyric acid acetyltransferase GO:0008080|GO:0019491|GO:0033816 G3DSA:3.40.630.30|PF00583|SSF55729|TIGR02406 MEALZ_RS15870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|PTHR33164|PTHR33164:SF4|SM00347|SSF46785 MEALZ_RS15875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD PF03706|PTHR40277 MEALZ_RS15880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 MEALZ_RS15885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379 MEALZ_RS15895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001902|IPR002645|IPR011547 SLC26A/SulP transporter|SLC26A/SulP transporter domain|STAS domain GO:0008271|GO:0008272|GO:0015116|GO:0016020|GO:0016021|GO:0055085 G3DSA:3.30.750.24|PF00916|PTHR11814|PTHR11814:SF123|SSF52091 MEALZ_RS15900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000847|IPR005119|IPR011991 LysR, substrate-binding|Transcription regulator HTH, LysR|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.190.10|PF00126|PF03466|PR00039|PTHR30126|PTHR30126:SF23|SSF46785|SSF53850 MEALZ_RS15905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13649|PTHR10108|SSF53335 MEALZ_RS15910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011659|IPR015943 WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515 G3DSA:2.130.10.10|PF07676|SSF82171 MEALZ_RS15920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025528 BrnA antitoxin of type II toxin-antitoxin system PF14384 MEALZ_RS15925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR34107|SSF52980 MEALZ_RS15930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR013321 Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|SSF47598 MEALZ_RS15935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002716|IPR029060 PIN domain|PIN domain-like G3DSA:3.40.50.1010|PF01850|PTHR33653|PTHR33653:SF1|SSF88723 MEALZ_RS15940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018841 Protein of unknown function DUF2442 G3DSA:3.30.2020.10|PF10387|SSF143880 MEALZ_RS15945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000412|IPR013525 ABC-2 transporter|ABC-2 type transporter GO:0006810|GO:0016020 PF01061|PTHR30413|PTHR30413:SF8 MEALZ_RS15965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|SSF53756 MEALZ_RS15970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR34107|SSF52980 MEALZ_RS15985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982|IPR014057 Addiction module antidote protein, HI1420|Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF13443|PTHR40275|PTHR40275:SF1|SSF47413|TIGR02684 MEALZ_RS15995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009387 Toxin HigB-2 PF06296|PIRSF018634 MEALZ_RS16000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025587 Domain of unknown function DUF4351 PF14261 MEALZ_RS16005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001082|IPR012902 Fimbrial protein pilin|Prokaryotic N-terminal methylation site GO:0007155|GO:0009289 G3DSA:3.30.700.10|PF00114|PF13633|PS00409|PTHR30093|SSF54523|TIGR02532 MEALZ_RS16010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 MEALZ_RS16020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006842|IPR025587 Domain of unknown function DUF4351|Transposase (putative), YhgA-like PF04754|PF14261|PTHR35586 MEALZ_RS16025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS16030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS16035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|PTHR12778|SSF103473 MEALZ_RS16040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 PF03600|PTHR10283|PTHR10283:SF91 MEALZ_RS16045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005117|IPR006067 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF01077|PF03460|PTHR11493|PTHR11493:SF47|SSF55124|SSF56014 MEALZ_RS16050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008318 Uncharacterised conserved protein UCP030820 PF06073|PIRSF030820 MEALZ_RS16055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003781|IPR005810|IPR005811|IPR016040|IPR016102|IPR017440 ATP-citrate lyase/succinyl-CoA ligase|ATP-citrate lyase/succinyl-CoA ligase, active site|CoA-binding|NAD(P)-binding domain|Succinyl-CoA ligase, alpha subunit|Succinyl-CoA synthetase-like GO:0003824|GO:0008152|GO:0048037 G3DSA:3.40.50.261|G3DSA:3.40.50.720|PF00549|PF02629|PIRSF001553|PR01798|PS00399|PS01216|PTHR11117|SM00881|SSF51735|SSF52210|TIGR01019 MEALZ_RS16060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005809|IPR005811|IPR013650|IPR013815|IPR013816|IPR016102|IPR017866 ATP-citrate lyase/succinyl-CoA ligase|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|ATP-grasp fold, succinyl-CoA synthetase-type|Succinyl-CoA synthetase, beta subunit|Succinyl-CoA synthetase, beta subunit, conserved site|Succinyl-CoA synthetase-like GO:0003824|GO:0005524|GO:0008152 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.261|MF_00558|PF00549|PF08442|PIRSF001554|PS01217|PTHR11815|PTHR11815:SF1|SSF52210|SSF56059|TIGR01016 MEALZ_RS16065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF13188|PR00344|PTHR24423|PTHR24423:SF483|SM00387|SM00388|SSF47384|SSF55785|SSF55874 MEALZ_RS16070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|PTHR32071|PTHR32071:SF28|SM00382|SM00448|SSF46689|SSF52172|SSF52540 MEALZ_RS16080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002938|IPR010971|IPR018168|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|PTHR13789|PTHR13789:SF5|SSF51905|TIGR01988 MEALZ_RS16085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002938|IPR010971|IPR011295|IPR018168|IPR023753 2-polyprenyl-6-methoxyphenol 4-hydroxylase|FAD-binding domain|FAD/NAD(P)-binding domain|Ubiquinone biosynthesis hydroxylase UbiH/COQ6|Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0006744|GO:0008681|GO:0016491|GO:0016709|GO:0050660|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PS01304|PTHR13789|PTHR13789:SF214|SSF51905|TIGR01984|TIGR01988 MEALZ_RS16090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000994|IPR001131|IPR007865|IPR028980|IPR029149 Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain|Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site GO:0004177|GO:0030145 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF05195|PS00491|PTHR10804|PTHR10804:SF17|SM01011|SSF53092|SSF55920 MEALZ_RS16095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011978 Uncharacterised protein family UPF0149 PF03695|PTHR37528|SSF101327|TIGR02292 MEALZ_RS16100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012662 Conserved hypothetical protein CHP02449 TIGR02449 MEALZ_RS16105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007838 Cell division protein ZapA-like PF05164|PTHR34981|PTHR34981:SF1|SSF102829 MEALZ_RS16110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002740|IPR015947 EVE domain|PUA-like domain G3DSA:3.10.590.10|PF01878|PTHR14087|SSF88697 MEALZ_RS16115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000023|IPR011405|IPR022953 ATP-dependent 6-phosphofructokinase|Phosphofructokinase domain|Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0003872|GO:0006002|GO:0006096|GO:0047334 G3DSA:3.40.50.450|MF_01977|PF00365|PIRSF036484|PR00476|PTHR13697|PTHR13697:SF30|SSF53784 MEALZ_RS16120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF01564|PTHR12176|SSF53335 MEALZ_RS16125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006638|IPR007197|IPR013704|IPR020612|IPR022946|IPR023404|IPR024560 Elongator protein 3/MiaB/NifB|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe|Uncharacterised protein family UPF0313|Uncharacterised protein family UPF0313, C-terminal|Uncharacterised protein family UPF0313, N-terminal GO:0003824|GO:0051536|GO:0051539 G3DSA:3.80.30.20|MF_01251|PF04055|PF08497|PF11842|PS01278|PTHR32331|PTHR32331:SF3|SM00729|SSF102114|TIGR03904 MEALZ_RS16135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010106 Conserved hypothetical protein CHP01784 PF12784|PTHR41317|PTHR41317:SF1|TIGR01784 MEALZ_RS16140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR34504|PTHR34504:SF2|SSF143100 MEALZ_RS16155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003684 Porin, alpha proteobacteria type GO:0006810|GO:0015288|GO:0016020 PF02530|SSF56935 MEALZ_RS16160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 G3DSA:1.20.120.10|SSF47175 MEALZ_RS16165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000182|IPR006464|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0008080|GO:0016407 G3DSA:3.40.630.30|PF00583|PTHR23091|PTHR23091:SF247|SSF55729|TIGR01575 MEALZ_RS16170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005122|IPR005273 Uracil-DNA glycosylase, family 4 domain|Uracil-DNA glycosylase-like G3DSA:3.40.470.10|PF03167|PTHR33693|PTHR33693:SF1|SM00986|SM00987|SSF52141|TIGR00758 MEALZ_RS16175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|PTHR10277|PTHR10277:SF9|SM00917|SSF110921|SSF51569|TIGR00973 MEALZ_RS16180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|PTHR15362|PTHR15362:SF5|TIGR00473 MEALZ_RS16185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR016040|IPR023753 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|FAD/NAD(P)-binding domain|Ketol-acid reductoisomerase|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.50.50.60|MF_00435|PF01450|PF07991|PTHR21371|SSF48179|SSF51735|TIGR00465 MEALZ_RS16190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|PTHR30239|SSF55021|TIGR00119 MEALZ_RS16195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PTHR18968|PTHR18968:SF116|SSF52467|SSF52518|TIGR00118 MEALZ_RS16200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF13714|PTHR21631|PTHR21631:SF12|SSF51621 MEALZ_RS16205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021246 Protein of unknown function DUF2797 PF10977 MEALZ_RS16210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 G3DSA:3.90.1170.40|PF02391|PTHR23404|PTHR23404:SF2|SSF54690 MEALZ_RS16215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003749|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|PTHR33359|SSF54285 MEALZ_RS16220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002820|IPR023045|IPR023046 Molybdenum cofactor biosynthesis C|Molybdenum cofactor biosynthesis C, bacterial-type|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|PTHR22960|SSF55040|TIGR00581 MEALZ_RS16225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30183|PTHR30183:SF4|SSF161098 MEALZ_RS16230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001189|IPR019831|IPR019832|IPR019833 Manganese/iron superoxide dismutase|Manganese/iron superoxide dismutase, C-terminal|Manganese/iron superoxide dismutase, N-terminal|Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 G3DSA:1.10.287.990|PF00081|PF02777|PIRSF000349|PR01703|PS00088|PTHR11404|PTHR11404:SF8|SSF46609|SSF54719 MEALZ_RS16235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012042|IPR023577|IPR033469 CYTH domain|CYTH-like domain|Inorganic triphosphatase NeuTTM/CthTTM-like G3DSA:2.40.320.10|PF01928|PIRSF016487|PTHR40114|SM01118|SSF55154 MEALZ_RS16240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS16245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000813|IPR017896|IPR017900|IPR022569 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|7Fe ferredoxin|Ferredoxin, C-terminal GO:0009055 G3DSA:3.30.70.20|PF00037|PF11953|PR00354|PS00198|PTHR11938|PTHR11938:SF101|SSF54862 MEALZ_RS16250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|PTHR14413|SSF64263|TIGR00059 MEALZ_RS16255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:2.170.120.12|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|PTHR32108|PTHR32108:SF0|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 MEALZ_RS16260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001912|IPR002942|IPR005709|IPR018079|IPR022801 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|PTHR11831|PTHR11831:SF4|SM00363|SM01390|SSF55174|TIGR01017 MEALZ_RS16265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|PTHR11759|SSF53137|TIGR03632 MEALZ_RS16270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001892|IPR010979|IPR018269|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13, conserved site|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|PS00646|PTHR10871|SSF46946|TIGR03631 MEALZ_RS16275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|PTHR10906|PTHR10906:SF2|SSF103491|TIGR00967 MEALZ_RS16280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L18e/L15P GO:0003735|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PTHR12934|SSF52080|TIGR01071 MEALZ_RS16285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000851|IPR005324|IPR005712|IPR013810|IPR014720|IPR014721|IPR018192|IPR020568 Double-stranded RNA-binding domain|Ribosomal protein S5|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|PTHR13718|SSF54211|SSF54768|TIGR01021 MEALZ_RS16290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|PTHR12899|SSF53137|TIGR00060 MEALZ_RS16295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|PTHR11655|PTHR11655:SF14|SSF56053|TIGR03654 MEALZ_RS16300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|PTHR11758|SSF56047 MEALZ_RS16305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001209|IPR018271|IPR023036 Ribosomal protein S14|Ribosomal protein S14, bacterial/plastid|Ribosomal protein S14, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_00537|PF00253|PS00527|PTHR19836|SSF57716 MEALZ_RS16310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|PTHR11994|SSF55282 MEALZ_RS16315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|PTHR12903|SM00739|SSF50104|TIGR01079 MEALZ_RS16320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|PTHR11761|SM01374|SSF50193|TIGR01067 MEALZ_RS16325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000266|IPR012340|IPR019984 Nucleic acid-binding, OB-fold|Ribosomal protein S17, bacterial-type|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PTHR10744|SSF50249|TIGR03635 MEALZ_RS16330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001854|IPR018254 Ribosomal protein L29|Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|PS00579|PTHR10916|SSF46561|TIGR00012 MEALZ_RS16335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|PS00701|PTHR12220|SSF54686|TIGR01164 MEALZ_RS16340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|PTHR11760|PTHR11760:SF19|SM00322|SSF54814|SSF54821|TIGR01009 MEALZ_RS16345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|PTHR13501|SSF54843|TIGR01044 MEALZ_RS16350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|PTHR11880|SSF54570|TIGR01050 MEALZ_RS16355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|PTHR13691|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 MEALZ_RS16360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012677|IPR012678|IPR013025 Nucleotide-binding alpha-beta plait domain|Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0000166|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|PTHR11620|SSF54189 MEALZ_RS16365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|PTHR10746|SSF52166|TIGR03953 MEALZ_RS16370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000597|IPR009000|IPR019926|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Ribosomal protein L3, conserved site|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.30.10|G3DSA:4.10.960.10|MF_01325_B|PF00297|PS00474|PTHR11229|SSF50447|TIGR03625 MEALZ_RS16375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|PTHR11700|SM01403|SSF54999|TIGR01049 MEALZ_RS16380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF151|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 MEALZ_RS16385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR009022|IPR014721|IPR020568|IPR027417|IPR031157 Elongation factor G, III-V domain|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG, V domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|PTHR23115|PTHR23115:SF66|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 MEALZ_RS16390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|PTHR11205|SSF47973|TIGR01029 MEALZ_RS16395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacteria|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|PTHR11652|SSF50249|TIGR00981 MEALZ_RS16400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|PTHR19376|PTHR19376:SF32|SM00663|SSF64484|TIGR02386 MEALZ_RS16405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR015712|IPR019462 DNA-directed RNA polymerase, beta subunit|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351|GO:0032549 G3DSA:2.30.150.10|G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|PTHR20856|PTHR20856:SF20|SSF64484|TIGR02013 MEALZ_RS16410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 MEALZ_RS16415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PF00466|PS01109|PTHR11560|SSF160369 MEALZ_RS16420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002143|IPR005878|IPR016094|IPR016095|IPR023673|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, 2-layer alpha/beta-sandwich|Ribosomal protein L1, 3-layer alpha/beta-sandwich|Ribosomal protein L1, bacterial-type|Ribosomal protein L1, conserved site|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|G3DSA:3.40.50.790|MF_01318_B|PF00687|PIRSF002155|PS01199|PTHR23105|PTHR23105:SF5|SSF56808|TIGR01169 MEALZ_RS16425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000911|IPR006519|IPR020783|IPR020784|IPR020785 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11, conserved site|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|PS00359|PTHR11661|SM00649|SSF46906|SSF54747|TIGR01632 MEALZ_RS16430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|PTHR30265|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 MEALZ_RS16435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PR01650|PTHR33910|PTHR33910:SF1|TIGR00964 MEALZ_RS16445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417|IPR031157 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation elongation factor EFTu/EF1A, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|PS00301|PTHR23115|PTHR23115:SF151|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 MEALZ_RS16465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|PTHR33284|SSF50715|TIGR00731 MEALZ_RS16470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|PTHR10210|PTHR10210:SF41|SM01400|SSF53271|TIGR01251 MEALZ_RS16480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|PTHR20861|PTHR20861:SF2|SSF54211|SSF55060|TIGR00154 MEALZ_RS16485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004565|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein LolB GO:0009279|GO:0015031 G3DSA:2.50.20.10|PF03550|PTHR30634|PTHR30634:SF11|SSF89392|TIGR00548 MEALZ_RS16490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13429|PF14559|PTHR23083|SM00028|SSF48452 MEALZ_RS16495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR016040|IPR018214 Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|PTHR21089|PTHR21089:SF3|SSF51735|SSF69075|SSF69742|TIGR01035 MEALZ_RS16500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000352|IPR004373|IPR005139|IPR014720 Double-stranded RNA-binding domain|Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|PTHR11075|PTHR11075:SF9|SM00937|SSF75620|TIGR00019 MEALZ_RS16505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002052|IPR004556|IPR019874|IPR025714|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF13847|PS00092|PTHR18895|PTHR18895:SF64|SSF53335|TIGR00536|TIGR03534 MEALZ_RS16510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000555|IPR028090 JAB domain, prokaryotic|JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 G3DSA:3.40.140.10|PF14464|PTHR34858|PTHR34858:SF1|SM00232|SSF102712 MEALZ_RS16515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS16525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR017959|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 G3DSA:1.10.10.410|MF_00121|PF02637|PF02934|PS01234|PTHR11659|PTHR11659:SF0|SM00845|SSF55931|SSF89095|TIGR00133 MEALZ_RS16530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS16535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000120|IPR004412|IPR020556|IPR023631 Amidase|Amidase signature domain|Amidase, conserved site|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0016884 G3DSA:3.90.1300.10|MF_00120|PF01425|PS00571|PTHR11895|PTHR11895:SF75|SSF75304|TIGR00132 MEALZ_RS16540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|PTHR15004|PTHR15004:SF0|SSF141000|TIGR00135 MEALZ_RS16550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|PTHR19375|PTHR19375:SF117|SSF53067|TIGR00904 MEALZ_RS16555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PIRSF038471|PTHR34138|PTHR34138:SF1|TIGR00219 MEALZ_RS16560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007227|IPR026034 Cell shape-determining protein MreD|Cell shape-determining protein MreD, proteobacterial type GO:0008360|GO:0016021 PF04093|PIRSF018472|PTHR37484|TIGR03426 MEALZ_RS16565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF2|SSF56519|SSF56601|TIGR03423 MEALZ_RS16570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle protein FtsW/RodA|Cell cycle, FtsW / RodA / SpoVE, conserved site|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|PTHR30474|PTHR30474:SF1|TIGR02210 MEALZ_RS16575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011757|IPR023346|IPR031304 Lysozyme-like domain|Lytic transglycosylase MltB|Transglycosylase SLT domain 2 G3DSA:1.10.530.10|PF13406|PTHR30163|PTHR30163:SF0|SSF53955|TIGR02282 MEALZ_RS16580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001967|IPR012338|IPR012907|IPR015956|IPR018044 Beta-lactamase/transpeptidase-like|Penicillin-binding protein-associated|Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0004180|GO:0006508|GO:0009002 G3DSA:2.60.410.10|G3DSA:3.40.710.10|PF00768|PF07943|PR00725|PTHR21581|PTHR21581:SF3|SM00936|SSF56601|SSF69189 MEALZ_RS16585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001544|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|PTHR11825|PTHR11825:SF38|SSF56752 MEALZ_RS16590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007454|IPR027471 Uncharacterised protein family UPF0250|YbeD-like domain G3DSA:3.30.70.1460|MF_00659|PF04359|PTHR38036|PTHR38036:SF1|SSF117991 MEALZ_RS16595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000544|IPR004143|IPR020605 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Octanoyltransferase|Octanoyltransferase, conserved site GO:0005737|GO:0006464|GO:0009107|GO:0016415 G3DSA:3.90.1550.10|MF_00013|PD006086|PF03099|PIRSF016262|PS01313|PTHR10993|SSF55681|TIGR00214 MEALZ_RS16600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003698|IPR006638|IPR007197|IPR013785|IPR031691 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Lipoyl synthase|Lipoyl synthase, N-terminal|Radical SAM GO:0003824|GO:0009107|GO:0016992|GO:0051536|GO:0051539 G3DSA:3.20.20.70|MF_00206|PF04055|PF16881|PIRSF005963|PTHR10949|SM00729|SSF102114|TIGR00510 MEALZ_RS16605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003029|IPR006641|IPR010994|IPR012337|IPR012340|IPR018974|IPR022967|IPR023097|IPR023319|IPR023323|IPR032639 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribonuclease H-like domain|RuvA domain 2-like|S1 domain|Tex RuvX-like domain|Tex protein, YqgF-like domain|Tex-like domain|Tex-like protein, HTH domain|Tex-like protein, N-terminal|YqgF/RNase H-like domain GO:0003676|GO:0006139 G3DSA:1.10.10.650|G3DSA:1.10.150.310|G3DSA:1.10.3500.10|G3DSA:2.40.50.140|G3DSA:3.30.420.140|PF00575|PF09371|PF12836|PF16921|PTHR10724|PTHR10724:SF1|SM00316|SM00732|SSF158832|SSF47781|SSF50249|SSF53098 MEALZ_RS16610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023824 Conserved hypothetical protein CHP04073, exosortase-affiliated TIGR04073 MEALZ_RS16615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006179|IPR008334|IPR029052|IPR030998 5'-Nucleotidase, C-terminal|5'-Nucleotidase/apyrase|Metallo-dependent phosphatase-like|Thiosulfohydrolase SoxB GO:0009166|GO:0016787 G3DSA:3.60.21.10|G3DSA:3.90.780.10|PF02872|PR01607|PTHR11575|PTHR11575:SF16|SSF55816|SSF56300|TIGR04486 MEALZ_RS16620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|PTHR38686|SSF56317|TIGR00546 MEALZ_RS16625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003607|IPR006674|IPR021812 HD domain|HD/PDEase domain|Protein of unknown function DUF3391 G3DSA:1.10.3210.10|PF11871|PF13487|SM00471|SSF109604 MEALZ_RS16630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PTHR13696|PTHR13696:SF66|SSF52540 MEALZ_RS16635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009912 Zinc-ribbon containing domain PF07295 MEALZ_RS16640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR025709 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF13603|PR00985|PS00178|PTHR11946|PTHR11946:SF7|SSF47323|SSF50677|SSF52374|TIGR00396 MEALZ_RS16645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 G3DSA:3.30.160.150|MF_01186|PF04390|PTHR38098|PTHR38098:SF1 MEALZ_RS16650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005790|IPR008921|IPR010372|IPR027417|IPR032780 DNA polymerase III delta, N-terminal|DNA polymerase III subunit delta, C-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, delta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.20|G3DSA:3.40.50.300|PF06144|PF14840|PTHR34388|SSF48019|SSF52540|TIGR01128 MEALZ_RS16655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:3.30.565.10|PF02518|PR00344|PTHR24423|SM00387|SSF55874 MEALZ_RS16660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006|IPR011990|IPR019734 CheY-like superfamily|Signal transduction response regulator, receiver domain|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0000160|GO:0005515 G3DSA:1.25.40.10|G3DSA:3.40.50.2300|PF00072|PF13432|PTHR23083|SM00028|SM00448|SSF48452|SSF52172 MEALZ_RS16665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF02518|PIRSF002583|PR00775|PS00298|PTHR11528|PTHR11528:SF44|SM00387|SSF110942|SSF54211|SSF55874 MEALZ_RS16675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009956 Post-segregation antitoxin CcdA PF07362 MEALZ_RS16680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001045|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|Spermidine/spermine synthases GO:0003824 G3DSA:2.30.140.10|G3DSA:3.40.50.150|MF_00198|PF01564|PTHR11558|SSF53335|TIGR00417 MEALZ_RS16685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000183|IPR002985|IPR009006|IPR022643|IPR022644|IPR022653|IPR022657|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Arginine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, conserved site|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0006527|GO:0008295|GO:0008792 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PF02784|PIRSF001336|PR01179|PR01180|PS00878|PS00879|PTHR11482|PTHR11482:SF36|SSF50621|SSF51419|TIGR01273 MEALZ_RS16690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002204|IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|3-hydroxyisobutyrate dehydrogenase-related, conserved site|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|PS00895|PTHR22981|SSF48179|SSF51735 MEALZ_RS16700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 MEALZ_RS16705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005697|IPR029062 Class I glutamine amidotransferase-like|Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 G3DSA:3.40.50.880|PD037892|PF04204|PTHR20919|PTHR20919:SF0|SSF52317 MEALZ_RS16710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002125|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|PTHR11079|PTHR11079:SF25|SSF53927 MEALZ_RS16715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010916 TonB box, conserved site PS00430 MEALZ_RS16720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018642 Protein of unknown function DUF2066 PF09839 MEALZ_RS16725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|PTHR10520|SSF55326|SSF56042|TIGR00878 MEALZ_RS16730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007404 LexA-binding, inner membrane-associated putative hydrolase PF04307 MEALZ_RS16735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 G3DSA:1.20.140.10|PF00441|SSF47203 MEALZ_RS16745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004624|IPR013987|IPR013988 PhnA protein|PhnA protein, C-terminal|PhnA protein, N-terminal G3DSA:2.20.25.10|G3DSA:2.30.30.40|PF03831|PF08274|PTHR30305|SSF57783|SSF82057|TIGR00686 MEALZ_RS16750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000380|IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013498|IPR013824|IPR013825|IPR023405|IPR023406|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 1|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|Toprim domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PR00417|PS00396|PTHR11390|PTHR11390:SF27|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 MEALZ_RS16755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007456 Smg MF_00598|PF04361|PTHR38692|PTHR38692:SF1 MEALZ_RS16760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003488 DNA recombination-mediator protein A GO:0009294 G3DSA:3.40.50.450|PF02481|PTHR32039|PTHR32039:SF8|SSF102405|TIGR00732 MEALZ_RS16765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018392 LysM domain G3DSA:3.10.350.10|PF01476|PTHR34700|PTHR34700:SF2 MEALZ_RS16770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000181|IPR023635 Formylmethionine deformylase|Peptide deformylase GO:0005506|GO:0042586 G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|PTHR10458|PTHR10458:SF10|SSF56420|TIGR00079 MEALZ_RS16775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|PTHR11138|SSF50486|SSF53328|TIGR00460 MEALZ_RS16780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001678|IPR004573|IPR006027|IPR023267|IPR029063 NusB/RsmB/TIM44|RNA (C5-cytosine) methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase|SAM-dependent methyltransferase RsmB/NOP2-type|rRNA small subunit methyltransferase B GO:0003723|GO:0006355|GO:0006364|GO:0008168|GO:0008649 G3DSA:1.10.940.10|G3DSA:3.30.70.1170|G3DSA:3.40.50.150|PF01029|PF01189|PR02008|PTHR22807|PTHR22807:SF30|SSF48013|SSF53335|TIGR00563 MEALZ_RS16785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025500 Protein of unknown function DUF4390 PF14334 MEALZ_RS16790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR003594|IPR003660|IPR003661|IPR004358|IPR013656|IPR017232 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, nitrogen fixation and metabolism regulator|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PF08448|PIRSF037532|PR00344|PTHR24423|PTHR24423:SF471|SM00091|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS16795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PS00688|PTHR32071|PTHR32071:SF17|SM00382|SM00448|SSF46689|SSF52172|SSF52540 MEALZ_RS16800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005822|IPR005823|IPR023564 Ribosomal protein L13|Ribosomal protein L13 domain|Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PTHR11545|SSF52161|TIGR01066 MEALZ_RS16805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|PTHR21569|SSF54211 MEALZ_RS16815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000634|IPR001721|IPR001926|IPR005787 ACT-like domain|Serine/threonine dehydratase, pyridoxal-phosphate-binding site|Threonine dehydratase, biosynthetic|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004794|GO:0006520|GO:0009097|GO:0030170 G3DSA:3.40.1020.10|G3DSA:3.40.50.1100|PF00291|PF00585|PS00165|PTHR10314|PTHR10314:SF30|SSF53686|SSF55021|TIGR01124 MEALZ_RS16820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004788|IPR020672 Ribose 5-phosphate isomerase, type A|Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 G3DSA:3.30.70.260|G3DSA:3.40.50.1360|MF_00170|PF06026|PTHR11934|PTHR11934:SF11|SSF100950|SSF75445|TIGR00021 MEALZ_RS16830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A PF13519|SM00327|SSF53300 MEALZ_RS16835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS16840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SM00327|SSF53300 MEALZ_RS16850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A SSF53300 MEALZ_RS16860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001270|IPR003593|IPR011703|IPR016366|IPR027417 AAA+ ATPase domain|ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|ClpA/B family|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PR00300|PTHR11603|PTHR11603:SF148|SM00382|SSF52540 MEALZ_RS16865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003420 Methanol dehydrogenase, beta subunit GO:0004022|GO:0015946|GO:0055114 G3DSA:4.10.160.10|PF02315|PIRSF029163|SSF48666 MEALZ_RS16870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056|IPR009153 Cytochrome c-like domain|Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 G3DSA:1.10.760.10|PF13442|PIRSF000008|SSF46626|TIGR03872 MEALZ_RS16875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001638|IPR022455 Methanol oxidation system protein MoxJ|Solute-binding protein family 3/N-terminal domain of MltF GO:0042597|GO:0046170 G3DSA:3.40.190.10|PF00497|SM00062|SSF53850|TIGR03870 MEALZ_RS16880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily GO:0005509|GO:0016020|GO:0016614|GO:0055114 G3DSA:2.140.10.10|PF01011|PF13360|PTHR32303|PTHR32303:SF6|SM00564|SSF50998|TIGR03075 MEALZ_RS16885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PTHR26402|PTHR26402:SF151|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS16890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001148|IPR023561 Alpha carbonic anhydrase|Carbonic anhydrase, alpha-class G3DSA:3.10.200.10|PF00194|PTHR18952|PTHR18952:SF122|SSF51069 MEALZ_RS16895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR032806 H repeat-associated protein, N-terminal|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13808|PTHR30298 MEALZ_RS16900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001148|IPR023561 Alpha carbonic anhydrase|Carbonic anhydrase, alpha-class G3DSA:3.10.200.10|PF00194|PTHR18952|PTHR18952:SF86|SM01057|SSF51069 MEALZ_RS16905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019587|IPR023393 Polyketide cyclase/dehydrase|START-like domain G3DSA:3.30.530.20|PF10604|PTHR39332|PTHR39332:SF2|SSF55961 MEALZ_RS16915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001279|IPR011108|IPR022712 Beta-Casp domain|Metallo-beta-lactamase|Zn-dependent metallo-hydrolase, RNA specificity domain G3DSA:3.60.15.10|PF00753|PF07521|PF10996|PTHR11203|PTHR11203:SF11|SM00849|SM01027|SSF56281 MEALZ_RS16920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002523|IPR004488 Magnesium/cobalt transport protein CorA|Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020|GO:0030001|GO:0046873|GO:0055085 G3DSA:1.20.58.340|G3DSA:3.30.460.20|PF01544|PTHR21535|PTHR21535:SF33|SSF143865|SSF144083|TIGR00383 MEALZ_RS16925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006342|IPR029063 Methyltransferase FkbM|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF05050|PTHR34203|PTHR34203:SF2|SSF53335|TIGR01444 MEALZ_RS16930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 G3DSA:3.40.630.10|PF04952|PIRSF039012|PTHR37326|PTHR37326:SF1|SSF53187 MEALZ_RS16935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004666|IPR013651|IPR013815|IPR013816|IPR016185|IPR023533 ATP-grasp fold, RimK-type|ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Pre-ATP-grasp domain|Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX|Ribosomal protein S6--L-glutamate ligase RimK GO:0003824|GO:0005524|GO:0006464 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_01552|PF08443|PTHR21621|PTHR21621:SF0|SSF56059|TIGR00768 MEALZ_RS16945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005839|IPR005840|IPR006638|IPR007197|IPR012340|IPR013848|IPR020612|IPR023404|IPR023970 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Methylthiotransferase/radical SAM-type protein|Nucleic acid-binding, OB-fold|Radical SAM|Radical SAM, alpha/beta horseshoe|Ribosomal protein S12 methylthiotransferase RimO GO:0003824|GO:0005737|GO:0009451|GO:0016740|GO:0018339|GO:0043412|GO:0051536|GO:0051539 G3DSA:2.40.50.140|G3DSA:3.80.30.20|MF_01865|PF00919|PF04055|PS01278|PTHR11918|PTHR11918:SF57|SM00729|SSF102114|TIGR00089|TIGR01125 MEALZ_RS16950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|MF_00823|PF03255|PR01069|PTHR22855|PTHR22855:SF42|SSF52096|TIGR00513 MEALZ_RS16955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR003959|IPR008921|IPR021886|IPR027417|IPR032423 AAA ATPase, C-terminal domain|AAA+ ATPase domain|ATPase, AAA-type, core|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0006260 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF00004|PF12002|PF16193|PTHR13779|PTHR13779:SF7|SM00382|SSF48019|SSF52540 MEALZ_RS16960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004564|IPR018323|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA, Proteobacteria|Outer membrane lipoprotein carrier protein LolA-like GO:0042597|GO:0042953|GO:0042954 G3DSA:2.50.20.10|MF_00240|PF03548|PTHR35869|SSF89392|TIGR00547 MEALZ_RS16965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006151|IPR011342|IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Shikimate dehydrogenase|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0019632|GO:0050661|GO:0055114 G3DSA:3.40.192.10|G3DSA:3.40.50.720|MF_00222|PF01488|PF08501|PTHR21089|PTHR21089:SF2|SSF51735|SSF53223|TIGR00507 MEALZ_RS16975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|PTHR11458|SM01004|SSF51569 MEALZ_RS16980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008869|IPR023094|IPR032710 NTF2-like domain|Toluene tolerance Ttg2/phospholipid-binding protein MlaC|Toluene tolerance protein, alpha-helical G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649|PTHR36573 MEALZ_RS16985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005271|IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase|tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0008152|GO:0008168|GO:0016300 G3DSA:3.40.50.150|MF_01589|PF08241|PIRSF006325|PTHR10108|PTHR10108:SF809|SSF53335|TIGR00740 MEALZ_RS16990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010017|IPR027555|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (mo5U34)-methyltransferase|tRNA (mo5U34)-methyltransferase-like GO:0002098|GO:0016300 G3DSA:3.40.50.150|MF_01590|PF08003|PTHR10108|PTHR10108:SF847|SSF53335|TIGR00452 MEALZ_RS16995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001647|IPR009057|IPR011075|IPR015893 DNA-binding HTH domain, TetR-type|Homeodomain-like|Tetracycline transcriptional regulator, TetR-like, C-terminal|Tetracycline transcriptional regulator, TetR-related, C-terminal GO:0003677 G3DSA:1.10.357.10|PF00440|PTHR30055|SSF46689|SSF48498 MEALZ_RS17000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|PTHR14269|PTHR14269:SF13|TIGR00560 MEALZ_RS17005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000305|IPR001162|IPR001943|IPR004791|IPR010994|IPR027299 GIY-YIG domain|GIY-YIG nuclease superfamily|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF14520|PTHR30562|PTHR30562:SF1|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 MEALZ_RS17015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 PF01523|PTHR30624|PTHR30624:SF1|SSF111283 MEALZ_RS17020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002510|IPR025502 Metalloprotease TldD/PmbA|TldD GO:0006508|GO:0008237 PF01523|PIRSF004919|PTHR30624|PTHR30624:SF4|SSF111283 MEALZ_RS17025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010653 NlpB/DapX lipoprotein PF06804 MEALZ_RS17030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001110|IPR003010 Carbon-nitrogen hydrolase|Uncharacterised protein family UPF0012, conserved site GO:0006807|GO:0016810 G3DSA:3.60.110.10|PF00795|PS01227|PTHR23088|PTHR23088:SF27|SSF56317 MEALZ_RS17035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011836|IPR025263|IPR032712 AsmA-like, C-terminal|Conserved hypothetical protein CHP02099|Domain of unknown function DUF3971 PF13116|PF13502|PTHR38690|TIGR02099 MEALZ_RS17040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF00575|PF10150|PTHR30001|SM00316|SSF50249|TIGR00757 MEALZ_RS17045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0005737 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|PTHR11746|SSF52972|TIGR00172 MEALZ_RS17050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003742|IPR016051|IPR029026|IPR029028 Alpha/beta knot methyltransferases|Ribosomal RNA large subunit methyltransferase H|SPOUT methyltransferase, predicted|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0005737|GO:0006364|GO:0008168|GO:0031167 G3DSA:3.40.1280.10|MF_00658|PF02590|PIRSF004505|PTHR33603|PTHR33603:SF1|SSF75217|TIGR00246 MEALZ_RS17060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001270|IPR003593|IPR011703|IPR016366|IPR027417 AAA+ ATPase domain|ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|ClpA/B family|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PR00300|PTHR11603|SM00382|SSF52540 MEALZ_RS17065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A SSF53300 MEALZ_RS17075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF13519|SM00327|SSF53300 MEALZ_RS17080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005821|IPR028325 Ion transport domain|Voltage-gated potassium channel GO:0005216|GO:0005249|GO:0006811|GO:0006813|GO:0008076|GO:0016020|GO:0055085 G3DSA:1.10.287.70|PF00520|PR00169|PTHR11537|PTHR11537:SF137|SSF81324 MEALZ_RS17100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 PF04961|PTHR12234|SSF101262 MEALZ_RS17105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|PTHR10890|SM00840|SSF47323|SSF52374|TIGR00435 MEALZ_RS17110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|PTHR11071|PTHR11071:SF265|SSF50891 MEALZ_RS17115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR010138|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462|GO:0016787 G3DSA:3.60.21.10|MF_00575|PF00149|PTHR34990|PTHR34990:SF1|SSF56300|TIGR01854 MEALZ_RS17120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR006153|IPR014710|IPR018422|IPR018488|IPR018490 Cation/H+ exchanger|Cation/H+ exchanger, CPA1 family|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding, conserved site|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold GO:0006812|GO:0015299|GO:0016021|GO:0055085 G3DSA:2.60.120.10|PF00027|PF00999|PS00889|PTHR10110|PTHR10110:SF86|SM00100|SSF51206 MEALZ_RS17125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001479|IPR002372|IPR011047|IPR017512|IPR018391|IPR027295 PQQ-dependent dehydrogenase, methanol/ethanol family|Pyrrolo-quinoline quinone beta-propeller repeat|Pyrrolo-quinoline quinone repeat|Quinoprotein alcohol dehydrogenase-like domain|Quinoprotein alcohol dehydrogenase-like superfamily|Quinoprotein dehydrogenase, conserved site GO:0005509|GO:0016020|GO:0016614|GO:0030288|GO:0055114 G3DSA:2.140.10.10|PF01011|PF13360|PS00364|PTHR32303|PTHR32303:SF6|SM00564|SSF50998|TIGR03075 MEALZ_RS17130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001638|IPR022448 Quinoprotein dehydrogenase-associated|Solute-binding protein family 3/N-terminal domain of MltF G3DSA:3.40.190.10|PF00497|SM00062|SSF53850|TIGR03871 MEALZ_RS17135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF160|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 MEALZ_RS17140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006047|IPR010401|IPR013781|IPR017853|IPR032792 Glycogen debranching enzyme|Glycogen debranching enzyme, glucanotransferase domain|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0004134|GO:0004135|GO:0005975|GO:0005980 G3DSA:3.20.20.80|PF14701|PTHR10569|PTHR10569:SF2|SM00642|SSF51445 MEALZ_RS17145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF304|SSF53756|TIGR02095 MEALZ_RS17150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004300|IPR011330|IPR015293|IPR027291|IPR028995 Domain of unknown function DUF1957|Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase families 57/38, central domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:1.20.1430.10|G3DSA:3.20.110.10|PF03065|PF09210|PTHR41695|SSF88688|SSF88713 MEALZ_RS17155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR032585 Protein of unknown function DUF4912 PF16258 MEALZ_RS17160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003385|IPR013781|IPR017853 Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 77 GO:0004134|GO:0005975 G3DSA:3.20.20.80|PF02446|PTHR32438|PTHR32438:SF5|SSF51445|TIGR00217 MEALZ_RS17165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004300|IPR011330|IPR027291 Glycoside hydrolase 38/57, N-terminal domain|Glycoside hydrolase family 57, N-terminal domain|Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.110.10|PF03065|PTHR36306|PTHR36306:SF1|SSF88713 MEALZ_RS17170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005835|IPR005836|IPR011004|IPR011831|IPR023049|IPR029044 ADP-glucose pyrophosphorylase, conserved site|Glucose-1-phosphate adenylyltransferase|Glucose-1-phosphate adenylyltransferase GlgC, bacterial|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|Trimeric LpxA-like GO:0005978|GO:0008878|GO:0009058|GO:0016779 G3DSA:3.90.550.10|MF_00624|PF00483|PS00809|PTHR22572|PTHR22572:SF10|SSF51161|SSF53448|TIGR02091 MEALZ_RS17175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004193|IPR006047|IPR006048|IPR006407|IPR013780|IPR013781|IPR013783|IPR014756|IPR015902|IPR017853 1,4-alpha-glucan-branching enzyme, GlgB|Alpha-amylase/branching enzyme, C-terminal all beta|Glycoside hydrolase superfamily|Glycoside hydrolase, catalytic domain|Glycoside hydrolase, family 13|Glycoside hydrolase, family 13, N-terminal|Glycosyl hydrolase, all-beta|Glycosyl hydrolase, family 13, catalytic domain|Immunoglobulin E-set|Immunoglobulin-like fold GO:0003824|GO:0003844|GO:0004553|GO:0005975|GO:0005978|GO:0043169 G3DSA:2.60.40.10|G3DSA:2.60.40.1180|G3DSA:3.20.20.80|MF_00685|PF00128|PF02806|PF02922|PIRSF000463|PTHR10357|PTHR10357:SF160|SM00642|SSF51011|SSF51445|SSF81296|TIGR01515 MEALZ_RS17180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296|IPR011835|IPR013534 Bacterial/plant glycogen synthase|Glycosyl transferase, family 1|Starch synthase, catalytic domain GO:0004373 G3DSA:3.40.50.2000|MF_00484|PF00534|PF08323|PTHR12526|PTHR12526:SF295|SSF53756|TIGR02095 MEALZ_RS17185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005580 DbpA, RNA-binding domain PF03880 MEALZ_RS17190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000297|IPR015391|IPR023034|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Peptidyl-prolyl isomerase SurA|SurA N-terminal|Trigger factor/SurA domain GO:0003755|GO:0006457|GO:0016853|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 G3DSA:3.10.50.40|MF_01183|PF00639|PF09312|PF13616|PTHR10657|PTHR10657:SF16|SSF109998|SSF54534 MEALZ_RS17195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007543|IPR020889 LPS-assembly protein LptD|Organic solvent tolerance protein, C-terminal GO:0009279|GO:0010033|GO:0015920|GO:0019867|GO:0043165|GO:0061024 G3DSA:2.60.450.10|MF_01411|PF04453|PTHR30189 MEALZ_RS17200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002575|IPR011009 Aminoglycoside phosphotransferase|Protein kinase-like domain G3DSA:3.30.200.20|G3DSA:3.90.1200.10|PF01636|PTHR33540|PTHR33540:SF1|SSF56112 MEALZ_RS17205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|PTHR22572|PTHR22572:SF15|SSF53448 MEALZ_RS17210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009923|IPR025543 Dodecin|Dodecin-like G3DSA:3.30.1660.10|PF07311|PTHR39324|PTHR39324:SF1|SSF89807 MEALZ_RS17220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001310|IPR011146|IPR026026 HIT-like domain|Histidine triad (HIT) protein|Histidine triad hydrolase, Hint-type GO:0003824 G3DSA:3.30.428.10|PF01230|PIRSF000714|PTHR23089|PTHR23089:SF13|SSF54197 MEALZ_RS17225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 PF03748|PTHR35091|PTHR35091:SF1 MEALZ_RS17230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001764|IPR017853|IPR022956 Beta-hexosaminidase, bacterial|Glycoside hydrolase superfamily|Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0004563|GO:0005975 G3DSA:3.20.20.300|MF_00364|PF00933|PTHR30480|PTHR30480:SF7|SSF51445 MEALZ_RS17235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF56|SSF53271 MEALZ_RS17240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000845|IPR001369|IPR010044 Methylthioadenosine phosphorylase (MTAP)|Nucleoside phosphorylase domain|PNP/MTAP phosphorylase GO:0003824|GO:0009116|GO:0017061 G3DSA:3.40.50.1580|MF_01963|PF01048|PTHR11904|PTHR11904:SF1|SSF53167|TIGR01694 MEALZ_RS17245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021309 Protein of unknown function DUF2892 PF11127 MEALZ_RS17250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PTHR10632|PTHR10632:SF7|SSF51905 MEALZ_RS17255 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR008207|IPR011006 CheY-like superfamily|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction response regulator, receiver domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|G3DSA:3.40.50.2300|PF00072|PF01627|PTHR24423|PTHR24423:SF382|SM00448|SSF47226|SSF52172 MEALZ_RS17260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004360|IPR018146|IPR029068 Glyoxalase I, conserved site|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|Glyoxalase/fosfomycin resistance/dioxygenase domain GO:0004462|GO:0046872 G3DSA:3.10.180.10|PF00903|PS00934|PTHR21366|PTHR21366:SF4|SSF54593 MEALZ_RS17270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR020011|IPR020012 Motility protein FimV, C-terminal|Motility protein FimV, N-terminal|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|TIGR03504|TIGR03505 MEALZ_RS17275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|PTHR10174|PTHR10174:SF2|SM00859|SSF51735|SSF55347|TIGR01296 MEALZ_RS17280 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007251 Low affinity iron permease, Fet4 GO:0055085 PF04120 MEALZ_RS17285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000573|IPR004431|IPR015928|IPR015937 3-isopropylmalate dehydratase, small subunit|Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0009316 G3DSA:3.20.19.10|MF_01031|PF00694|PTHR11670|PTHR11670:SF27|SSF52016|TIGR00171 MEALZ_RS17290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001030|IPR004430|IPR015931|IPR015932|IPR015937|IPR018136 3-isopropylmalate dehydratase, large subunit|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/isopropylmalate dehydratase GO:0003861|GO:0008152|GO:0009098|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01026|PF00330|PR00415|PS00450|PS01244|PTHR11670|PTHR11670:SF38|SSF53732|TIGR00170 MEALZ_RS17295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000850|IPR006259|IPR007862|IPR027417 Adenylate kinase subfamily|Adenylate kinase, active site lid domain|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0004017|GO:0005524|GO:0006139|GO:0016776|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PF05191|PR00094|PS00113|PTHR23359|SSF52540|TIGR01351 MEALZ_RS17300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644 CBS domain G3DSA:3.10.580.10|PF00571|PTHR11911|SM00116|SSF54631 MEALZ_RS17305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009858 Protein of unknown function DUF1415 PF07209 MEALZ_RS17315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 G3DSA:3.40.1500.10|MF_00333|PF01218|PIRSF000166|PR00073|PTHR10755|SSF102886 MEALZ_RS17320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002816 Pheromone shutdown, TraB PF01963|PTHR40590 MEALZ_RS17325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001179|IPR023566 FKBP-type peptidyl-prolyl cis-trans isomerase domain|Peptidyl-prolyl cis-trans isomerase, FKBP-type GO:0006457 G3DSA:3.10.50.40|PF00254|PTHR10516|PTHR10516:SF316|SSF54534 MEALZ_RS17330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001437|IPR006358|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor GreB|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|MF_00930|PF01272|PF03449|PIRSF006092|PS00829|PS00830|PTHR30437|PTHR30437:SF6|SSF46557|SSF54534|TIGR01461 MEALZ_RS17335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|PTHR11374|PTHR11374:SF4|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 MEALZ_RS17370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|PTHR32194|SSF56235|TIGR03692 MEALZ_RS17375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF07724|PF10431|PTHR11262|PTHR11262:SF3|SM00382|SM01086|SSF52540|TIGR00390 MEALZ_RS17380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010376 Domain of unknown function DUF971 PF06155|PTHR35303|PTHR35303:SF1 MEALZ_RS17385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|PTHR10108|PTHR10108:SF864|SSF53335|TIGR01934 MEALZ_RS17390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003033 SCP2 sterol-binding domain PF02036|PTHR38693|PTHR38693:SF1|SSF55718 MEALZ_RS17395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004147|IPR010232|IPR011009 Probable protein kinase UbiB|Protein kinase-like domain|UbiB domain GO:0006744 G3DSA:3.90.1200.10|MF_00414|PF03109|PTHR10566|PTHR10566:SF79|SSF56112|TIGR01982 MEALZ_RS17400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001576|IPR015824|IPR015901|IPR015911 Phosphoglycerate kinase|Phosphoglycerate kinase, C-terminal|Phosphoglycerate kinase, N-terminal|Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 G3DSA:3.40.50.1260|G3DSA:3.40.50.1270|MF_00145|PF00162|PIRSF000724|PR00477|PS00111|PTHR11406|SSF53748 MEALZ_RS17405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|PTHR34476|SM01409|SSF63562|TIGR00690 MEALZ_RS17410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0008152|GO:0015969|GO:0016597 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|PTHR21262|PTHR21262:SF0|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 MEALZ_RS17415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006056|IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|PTHR11803|SSF55298|TIGR00004 MEALZ_RS17420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR004609|IPR011545|IPR012340|IPR014001|IPR027417|IPR033454 ATP-dependent DNA helicase RecG|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|RecG, wedge domain GO:0003676|GO:0004003|GO:0005524|GO:0006281|GO:0006310 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.40.50.300|PF00270|PF00271|PF17191|PTHR24031|PTHR24031:SF249|SM00487|SM00490|SSF50249|SSF52540|TIGR00643 MEALZ_RS17425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007440|IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain|Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 G3DSA:3.40.1410.10|MF_01632|PF04345|PTHR38683|SSF64288 MEALZ_RS17435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004639|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PS00600|PTHR11986|PTHR11986:SF5|SSF53383|TIGR00713 MEALZ_RS17440 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|PTHR10108:SF714|SSF53335 MEALZ_RS17445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011722 Hemimethylated DNA-binding domain GO:0003677 PF08755|PTHR31350|PTHR31350:SF6|SM00992|SSF141255|TIGR02097 MEALZ_RS17450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000926|IPR032677 GTP cyclohydrolase II|GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 MF_00179|PF00925|PTHR21327|SSF142695|TIGR00505 MEALZ_RS17455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 MEALZ_RS17460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006197|IPR006199|IPR006200|IPR011991|IPR015927|IPR019759|IPR028360 LexA repressor, DNA-binding domain|Peptidase S24, LexA-like|Peptidase S24/S26, beta-ribbon domain|Peptidase S24/S26A/S26B|Peptidase S24/S26A/S26B/S26C|Transcription regulator LexA|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0004252|GO:0006355|GO:0006508|GO:0009432|GO:0045892 G3DSA:1.10.10.10|G3DSA:2.10.109.10|MF_00015|PF00717|PF01726|PR00726|PTHR33516|PTHR33516:SF2|SSF46785|SSF51306|TIGR00498 MEALZ_RS17465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007360 Invasion gene expression up-regulator, SirB PF04247|PIRSF005610|PTHR39594 MEALZ_RS17470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS17475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR008207|IPR011006 CheY-like superfamily|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF01627|PF02518|PR00344|PTHR24423|PTHR24423:SF382|SM00073|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47226|SSF47384|SSF52172|SSF55874 MEALZ_RS17480 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007487 ABC transporter, substrate-binding protein G3DSA:3.40.50.2300|PF04392|PTHR35271 MEALZ_RS17485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 MEALZ_RS17490 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000760|IPR020550|IPR020583|IPR022337 Inositol monophosphatase|Inositol monophosphatase, SuhB|Inositol monophosphatase, conserved site|Inositol monophosphatase, metal-binding site GO:0008934|GO:0046854|GO:0046855 G3DSA:3.30.540.10|G3DSA:3.40.190.80|PF00459|PR00377|PR01959|PS00629|PS00630|PTHR20854|PTHR20854:SF4|SSF56655 MEALZ_RS17495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001952|IPR017849|IPR017850 Alkaline phosphatase|Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152|GO:0016791 G3DSA:3.40.720.10|PF00245|PR00113|PTHR11596|PTHR11596:SF5|SM00098|SSF53649 MEALZ_RS17500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR004358|IPR013976|IPR029016 GAF domain-like|Histidine kinase-like ATPase, C-terminal domain|Metal-dependent hydrolase HDOD|Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 G3DSA:1.10.3150.10|G3DSA:3.30.450.40|G3DSA:3.30.565.10|PF02518|PF08668|PR00344|PTHR33525|PTHR33525:SF3|SM00387|SSF109604|SSF55781|SSF55874 MEALZ_RS17505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR001789|IPR011006|IPR029787 CheY-like superfamily|EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13426|PTHR33121|PTHR33121:SF10|SM00052|SM00086|SM00091|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS17510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003812|IPR010488|IPR027417 Fido domain|P-loop containing nucleoside triphosphate hydrolase|Zeta toxin domain GO:0005524|GO:0016301 G3DSA:1.10.3290.10|G3DSA:3.40.50.300|PF06414 MEALZ_RS17520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR001789|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF613|SM00421|SM00448|SSF46894|SSF52172 MEALZ_RS17530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013767|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold GO:0006355 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00989|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS17540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002563|IPR012349 FMN-binding split barrel|Flavin reductase like domain GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01613|PTHR30466|SM00903|SSF50475 MEALZ_RS17545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|PTHR32179|SSF51690|SSF54675|TIGR00078 MEALZ_RS17550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 G3DSA:3.40.80.10|PF01510|PTHR30417|PTHR30417:SF4|SM00644|SSF55846 MEALZ_RS17555 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|PS00855|PTHR33695|PTHR33695:SF1|TIGR00077 MEALZ_RS17560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|PTHR11946|PTHR11946:SF11|SSF47323|SSF50677|SSF52374|TIGR00392 MEALZ_RS17565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002606|IPR014729|IPR015864|IPR015865|IPR023465|IPR023468 FAD synthetase|Riboflavin kinase|Riboflavin kinase domain|Riboflavin kinase domain, bacterial/eukaryotic|Riboflavin kinase, bacterial|Rossmann-like alpha/beta/alpha sandwich fold GO:0003919|GO:0008531|GO:0009231 G3DSA:2.40.30.30|G3DSA:3.40.50.620|PF01687|PF06574|PIRSF004491|PTHR22749|PTHR22749:SF0|SM00904|SSF52374|SSF82114|TIGR00083 MEALZ_RS17570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|PTHR33398|SSF46992|TIGR00029 MEALZ_RS17575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|PTHR11063|PTHR11063:SF6|SM00359|SSF53633|SSF88697|TIGR01027 MEALZ_RS17580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417 GTP binding domain|GTP-binding protein Obg/CgtA|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|PTHR11702|PTHR11702:SF3|SSF52540|SSF82051|TIGR02729 MEALZ_RS17585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001684|IPR018261 Ribosomal protein L27|Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|PS00831|PTHR15893|SSF110324|TIGR00062 MEALZ_RS17590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001787|IPR018258|IPR028909 Ribosomal protein L21|Ribosomal protein L21, conserved site|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|PS01169|PTHR21349|SSF141091|TIGR00061 MEALZ_RS17595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000092|IPR008949|IPR017446 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase-related GO:0008299 G3DSA:1.10.600.10|PF00348|PS00723|PTHR12001|PTHR12001:SF47|SSF48576 MEALZ_RS17600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002078|IPR002197|IPR003593|IPR009057|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00158|PF02954|PS00675|PS00676|PS00688|PTHR32071|SM00382|SSF46689|SSF52540 MEALZ_RS17605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 G3DSA:3.40.1050.10|PF00484|PTHR11002|PTHR11002:SF4|SM00947|SSF53056 MEALZ_RS17620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004463|IPR011334|IPR015870|IPR020568 Ribosomal protein S5 domain 2-type fold|UDP-3-O-acyl N-acetylglucosamine deacetylase|UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal|UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 G3DSA:3.30.1700.10|G3DSA:3.30.230.20|MF_00388|PF03331|PTHR33694|PTHR33694:SF1|SSF54211|TIGR00325 MEALZ_RS17625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PTHR30314|PTHR30314:SF3|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 MEALZ_RS17630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.1490.110|G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|PTHR32432|PTHR32432:SF4|SM00842|SSF53067|TIGR01174 MEALZ_RS17640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PS00843|PS00844|PTHR23132|SSF52440|SSF56059|TIGR01205 MEALZ_RS17645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|PTHR21071|PTHR21071:SF4|SSF56176|SSF56194|TIGR00179 MEALZ_RS17650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000713|IPR004101|IPR005758|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF5|SSF51984|SSF53244|SSF53623|TIGR01082 MEALZ_RS17655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|PTHR21015|PTHR21015:SF22|SSF53756|TIGR01133 MEALZ_RS17660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001182|IPR013437 Cell cycle protein FtsW/RodA|Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 MF_00913|PF01098|PTHR30474|PTHR30474:SF2|TIGR02614 MEALZ_RS17665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002938|IPR004101|IPR005762|IPR013221|IPR016040 FAD-binding domain|Mur ligase, C-terminal|Mur ligase, central|NAD(P)-binding domain|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301|GO:0071949 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF01494|PF02875|PF08245|PTHR23135|PTHR23135:SF2|SSF51984|SSF53244|SSF53623|TIGR01087 MEALZ_RS17670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|PTHR22926|PTHR22926:SF5|TIGR00445 MEALZ_RS17675 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_02019|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF3|SSF53244|SSF53623|SSF63418|TIGR01143 MEALZ_RS17680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF4|SSF53244|SSF53623|SSF63418|TIGR01085 MEALZ_RS17685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001460|IPR005311|IPR012338 Beta-lactamase/transpeptidase-like|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PTHR30627|PTHR30627:SF1|SSF56519|SSF56601 MEALZ_RS17690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 MF_00910|PF04999|PTHR37479|PTHR37479:SF1|TIGR02209 MEALZ_RS17695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|PTHR11265|PTHR11265:SF0|SSF53335|SSF81799|TIGR00006 MEALZ_RS17700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 MF_01008|PD006745|PF02381|PTHR34701|SSF89447|TIGR00242 MEALZ_RS17705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000878|IPR008189|IPR014776|IPR014777|IPR018063 SAM-dependent methyltransferase RsmI, conserved site|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|PS01296|PTHR21091|PTHR21091:SF18|SSF53790|TIGR00096 MEALZ_RS17710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007443|IPR028082 Penicillin-binding protein activator LpoA|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF04348|PTHR38038|PTHR38038:SF1|SSF53822 MEALZ_RS17715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003509|IPR011335|IPR011856 Restriction endonuclease type II-like|Uncharacterised protein family UPF0102|tRNA endonuclease-like domain GO:0003676|GO:0004518 G3DSA:3.40.1350.10|MF_00048|PF02021|PTHR34039|PTHR34039:SF1|SSF52980|TIGR00252 MEALZ_RS17720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 G3DSA:3.40.50.10490|PF13580|PTHR30390|PTHR30390:SF5|SSF53697 MEALZ_RS17730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003798 DNA recombination RmuC PF02646|PTHR30563 MEALZ_RS17735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006344|IPR027417|IPR027785 P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecD|UvrD-like helicase C-terminal domain GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 G3DSA:3.40.50.300|MF_01487|PF13538|PF13604|PTHR10887|PTHR10887:SF284|SSF52540|TIGR01447 MEALZ_RS17740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009009|IPR012997 Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain G3DSA:2.40.40.10|PF03330|PTHR34183|PTHR34183:SF2|SSF50685|TIGR00413 MEALZ_RS17745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000212|IPR004586|IPR011335|IPR011604|IPR014016|IPR014017|IPR027417 DNA helicase, UvrD/REP type|Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecB|Restriction endonuclease type II-like|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0004518|GO:0005524|GO:0006281|GO:0008854|GO:0016787 G3DSA:1.10.3170.10|G3DSA:1.10.486.10|G3DSA:3.40.50.300|G3DSA:3.90.320.10|MF_01485|PF00580|PF12705|PF13361|PTHR11070|PTHR11070:SF23|SSF52540|SSF52980|TIGR00609 MEALZ_RS17750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 MEALZ_RS17755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 MEALZ_RS17760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001185|IPR019823 Large-conductance mechanosensitive channel|Large-conductance mechanosensitive channel, conserved site GO:0005216|GO:0006810|GO:0016021 MF_00115|PF01741|PR01264|PS01327|PTHR30266|PTHR30266:SF2|SSF81330|TIGR00220 MEALZ_RS17765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PD353566|PF13023|SSF109604 MEALZ_RS17770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PR00411|PTHR10668|SSF51905 MEALZ_RS17775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029069 HotDog domain G3DSA:3.10.129.10|PF13279|PTHR31793|PTHR31793:SF9|SSF54637 MEALZ_RS17780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001106|IPR008948|IPR022313|IPR024083 Aromatic amino acid lyase|Fumarase/histidase, N-terminal|L-Aspartase-like|Phenylalanine/histidine ammonia-lyases, active site GO:0003824|GO:0016841 G3DSA:1.10.275.10|G3DSA:1.20.200.10|PF00221|PS00488|PTHR10362|PTHR10362:SF7|SSF48557 MEALZ_RS17785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR34107|SSF52980 MEALZ_RS17790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004960|IPR014548 Bacterial lipid A biosynthesis acyltransferase|Predicted acyltransferase GO:0016021|GO:0016740 PF03279|PIRSF028561|PTHR30606|PTHR30606:SF6 MEALZ_RS17795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF84|SSF53448 MEALZ_RS17800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000873|IPR029069 AMP-dependent synthetase/ligase|HotDog domain GO:0003824|GO:0008152 G3DSA:3.10.129.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PTHR24095|PTHR24095:SF170|SSF54637|SSF56801 MEALZ_RS17810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003231|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PF00550|SSF47336 MEALZ_RS17815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009081 Phosphopantetheine binding ACP domain G3DSA:1.10.1200.10|PF00550|SSF47336 MEALZ_RS17820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014030 Beta-ketoacyl synthase, N-terminal PF13723 MEALZ_RS17825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|PTHR30636|TIGR00255 MEALZ_RS17830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009 Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00108|PTHR24362|SM00220|SSF56112 MEALZ_RS17835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001247|IPR002381|IPR015847|IPR018336|IPR020568|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|PNPase/RNase PH domain|Ribonuclease PH, conserved site|Ribonuclease phosphorolytic, bacterial-type|Ribosomal protein S5 domain 2-type fold GO:0000049|GO:0004549|GO:0008033 G3DSA:3.30.230.70|MF_00564|PF01138|PF03725|PS01277|PTHR11953|PTHR11953:SF0|SSF54211|SSF55666|TIGR01966 MEALZ_RS17840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0016787|GO:0017111 G3DSA:3.90.950.10|MF_01405|PF01725|PTHR11067|PTHR11067:SF9|SSF52972|TIGR00042 MEALZ_RS17845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF56059 MEALZ_RS17850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001646 Pentapeptide repeat PF00805|PTHR14136|PTHR14136:SF0|SSF141571 MEALZ_RS17855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001015|IPR019772 Ferrochelatase|Ferrochelatase, active site GO:0004325|GO:0006783 G3DSA:3.40.50.1400|MF_00323|PF00762|PS00534|PTHR11108|SSF53800|TIGR00109 MEALZ_RS17860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR012910 TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|SSF56935 MEALZ_RS17865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025711 PepSY domain PF03413 MEALZ_RS17870 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PF00999|PTHR32468|PTHR32468:SF4 MEALZ_RS17875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805|PTHR30035|PTHR30035:SF3 MEALZ_RS17880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PF01758|PTHR10361|PTHR10361:SF28 MEALZ_RS17885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR22573|PTHR22573:SF51|SSF53271 MEALZ_RS17890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10 MEALZ_RS17895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007359|IPR026268 Positive regulator of sigma(E), RseC/MucC|Protein RseC PF04246|PIRSF004923|PTHR35867|PTHR35867:SF1 MEALZ_RS17900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002733|IPR023473|IPR027485|IPR027623 AMMECR1|AMMECR1 domain|AMMECR1, N-terminal|AmmeMemoRadiSam system protein A G3DSA:3.30.1490.150|G3DSA:3.30.700.20|PF01871|PTHR13016|SSF143447|TIGR00296|TIGR04335 MEALZ_RS17905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002737 MEMO1 family MF_00055|PF01875|PTHR11060|PTHR11060:SF0|TIGR04336 MEALZ_RS17910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007197|IPR016431|IPR027596 AmmeMemoRadiSam system radical SAM enzyme|Pyruvate-formate lyase-activating enzyme, predicted|Radical SAM GO:0003824|GO:0051536 G3DSA:3.80.30.10|PF04055|PIRSF004869|PTHR30352|PTHR30352:SF5|SSF102114|TIGR04337 MEALZ_RS17915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572 MEALZ_RS17920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704|PTHR30572|PTHR30572:SF7 MEALZ_RS17925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022742|IPR029058 Alpha/Beta hydrolase fold|Serine aminopeptidase, S33 G3DSA:3.40.50.1820|PF12146|PTHR12277|SSF53474 MEALZ_RS17930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003791 Protein of unknown function UPF0178 MF_00489|PF02639|PTHR35146|PTHR35146:SF1 MEALZ_RS17935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000212|IPR005752|IPR013986|IPR014016|IPR014017|IPR027417 ATP-dependent DNA helicase Rep|DExx box DNA helicase domain|DNA helicase, UvrD/REP type|P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD-like Helicase, ATP-binding domain GO:0003677|GO:0004003|GO:0005524|GO:0006268|GO:0016787 G3DSA:1.10.10.160|G3DSA:1.10.486.10|G3DSA:3.40.50.300|MF_01920|PF00580|PF13361|PTHR11070|PTHR11070:SF19|SSF52540|TIGR01074 MEALZ_RS17945 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002610|IPR022764 Peptidase S54, rhomboid|Peptidase S54, rhomboid domain GO:0004252|GO:0006508|GO:0016021 G3DSA:1.20.1540.10|PF01694|PTHR22936|SSF144091 MEALZ_RS17950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008538|IPR011335|IPR012296 Domain of unknown function DUF820|Nuclease, putative, TT1808|Restriction endonuclease type II-like G3DSA:3.90.1570.10|PF05685|PTHR36558|PTHR36558:SF1|SSF52980 MEALZ_RS17955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925|PTHR31154 MEALZ_RS17965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013406 Conserved hypothetical protein CHP02574, addiction module PF09720 MEALZ_RS17985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029046 Lipoprotein localisation LolA/LolB/LppX G3DSA:2.50.20.10|SSF89392 MEALZ_RS17990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004869 Membrane transport protein, MMPL domain GO:0016020 G3DSA:1.20.1640.10|PF03176|SSF82866 MEALZ_RS17995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002052|IPR003356|IPR022749|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|DNA methylase, adenine-specific|N6 adenine-specific DNA methyltransferase, N-terminal domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0003677|GO:0006306|GO:0008168|GO:0008170|GO:0032259 G3DSA:3.40.50.150|PF02384|PF12161|PR00507|PS00092|PTHR30195|PTHR30195:SF10|SSF53335 MEALZ_RS18000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009362 Protein of unknown function DUF1016 PF06250|PTHR30547|PTHR30547:SF5 MEALZ_RS18005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF6|SSF116734 MEALZ_RS18010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025364 Domain of unknown function DUF4268 PF14088 MEALZ_RS18020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008878 Transposase IS66, Orf2 PF05717|PTHR36455|PTHR36455:SF1 MEALZ_RS18025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004291|IPR024463|IPR024474 Transposase TnpC, homeodomain|Transposase, IS66|Zinc-finger binding domain of transposase IS66 PF03050|PF13005|PF13007|PF13817|PTHR33678|PTHR33678:SF1 MEALZ_RS18030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003812|IPR011991 Fido domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.3290.10|PF02661|PTHR13504|SSF140931|SSF46785 MEALZ_RS18035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006935|IPR007409|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0005524|GO:0006304|GO:0016787 G3DSA:3.40.50.300|PF04313|PF04851|PTHR30195|PTHR30195:SF13|SM00487|SSF52540 MEALZ_RS18045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002938|IPR023753 FAD-binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114|GO:0071949 G3DSA:3.50.50.60|PF01494|PR00420|PTHR10617|PTHR10617:SF113|SSF51905 MEALZ_RS18055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|SM00448|SSF52172 MEALZ_RS18060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR24423|SM00448|SSF52172 MEALZ_RS18065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001633|IPR001789|IPR003018|IPR011006|IPR029016|IPR029787 CheY-like superfamily|EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|Signal transduction response regulator, receiver domain GO:0000160|GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.40|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00563|PF00990|PF13185|PTHR33121|PTHR33121:SF13|SM00052|SM00267|SM00448|SSF141868|SSF52172|SSF55073|SSF55781 MEALZ_RS18070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023824 Conserved hypothetical protein CHP04073, exosortase-affiliated TIGR04073 MEALZ_RS18075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000189|IPR006597|IPR008258|IPR011990|IPR023346 Lysozyme-like domain|Prokaryotic transglycosylase, active site|Sel1-like repeat|Tetratricopeptide-like helical domain|Transglycosylase SLT domain 1 GO:0000270|GO:0005515|GO:0008933|GO:0016020 G3DSA:1.10.530.10|G3DSA:1.25.40.10|PF01464|PS00922|PTHR21666|SM00671|SSF53955|SSF81901 MEALZ_RS18080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR001633|IPR029787|IPR032244 EAL domain|GGDEF domain|LapD/MoxY, periplasmic domain|Nucleotide cyclase G3DSA:3.20.20.450|G3DSA:3.30.70.270|PF00563|PF00990|PF16448|PTHR33121|PTHR33121:SF16|SM00052|SM00267|SSF141868|SSF55073 MEALZ_RS18085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010319 Transglutaminase-like cysteine peptidase, predicted PF06035|PTHR39327|PTHR39327:SF1|SSF54001 MEALZ_RS18090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003423|IPR010130 Outer membrane efflux protein|Type I secretion outer membrane protein, TolC GO:0005215|GO:0006810|GO:0019867 G3DSA:1.20.1600.10|PF02321|PTHR30026|PTHR30026:SF4|SSF56954|TIGR01844 MEALZ_RS18095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|SSF53300 MEALZ_RS18105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR011527|IPR017750|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter-like|ATPase, type I secretion system|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|G3DSA:3.90.70.10|PF00005|PF00664|PTHR24221|PTHR24221:SF248|SM00382|SSF52540|SSF90123|TIGR03375 MEALZ_RS18110 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003997|IPR006144|IPR010129 RTX secretion protein D, Gram-negative bacteria|Secretion protein HlyD, conserved site|Type I secretion membrane fusion protein, HlyD family GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 G3DSA:2.40.50.100|PF13437|PF13533|PR01490|PS00543|PTHR30386|PTHR30386:SF4|SSF111369|TIGR01843 MEALZ_RS18115 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR011991|IPR016032 Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF151|SM00421|SSF46894 MEALZ_RS18125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002611|IPR003593|IPR027417|IPR028350 AAA+ ATPase domain|DNA replication protein DnaC/insertion sequence putative ATP-binding protein|IstB-like ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|PF01695|PIRSF003073|PTHR30050|SM00382|SSF52540 MEALZ_RS18130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR009057|IPR012337 Homeodomain-like|Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0015074 G3DSA:1.10.10.60|G3DSA:3.30.420.10|PF00665|PTHR35004|PTHR35004:SF2|SSF46689|SSF53098 MEALZ_RS18150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008928|IPR012341 Six-hairpin glycosidase|Six-hairpin glycosidase-like GO:0003824 G3DSA:1.50.10.10|SSF48208 MEALZ_RS18155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 MEALZ_RS18160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734|IPR029489 O-GlcNAc transferase, C-terminal|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13844|PF14559|SM00028|SSF48452|SSF53756 MEALZ_RS18165 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010539 Protein of unknown function UCP009160 PF12811|PTHR41282|PTHR41282:SF1 MEALZ_RS18170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010152 CRISPR-associated protein Cas2 subtype PF09707|TIGR01873 MEALZ_RS18175 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002729|IPR019851 CRISPR-associated protein Cas1|CRISPR-associated protein Cas1, ECOLI subtype MF_01470|PF01867|TIGR00287|TIGR03638 MEALZ_RS18180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR33755|PTHR33755:SF5 MEALZ_RS18185 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 MEALZ_RS18190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF2|SSF143120|TIGR01552 MEALZ_RS18195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029060 PIN domain-like G3DSA:3.40.50.1010|SSF88723 MEALZ_RS18200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PF01402 MEALZ_RS18210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010179 CRISPR-associated protein Cse3 G3DSA:3.30.70.1200|G3DSA:3.30.70.1210|PF08798|SM01101|SSF117987|TIGR01907 MEALZ_RS18215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010147|IPR013422|IPR021124 CRISPR-associated protein Cas5, N-terminal|CRISPR-associated protein, Cas5|CRISPR-associated protein, CasD GO:0003723|GO:0043571|GO:0051607 PF09704|TIGR01868|TIGR02593 MEALZ_RS18220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010148 CRISPR-associated protein, CT1975 PF09344|TIGR01869 MEALZ_RS18225 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR018841 Protein of unknown function DUF2442 G3DSA:3.30.2020.10|PF10387|SSF143880 MEALZ_RS18230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025427 Protein of unknown function DUF4160 PF13711 MEALZ_RS18235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013382 CRISPR-associated protein Cse2 PF09485|TIGR02548 MEALZ_RS18240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013381 CRISPR-associated protein Cse1 PF09481|TIGR02547 MEALZ_RS18245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001650|IPR006474|IPR006483|IPR011545|IPR014001|IPR027417 CRISPR-associated Cas3-HD domain|DEAD/DEAH box helicase domain|Helicase Cas3, CRISPR-associated, core|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|SM00487|SSF52540|TIGR01587|TIGR01596 MEALZ_RS18250 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011991|IPR013196|IPR026881 Helix-turn-helix, type 11|WYL domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08279|PF13280|PTHR34580|PTHR34580:SF3 MEALZ_RS18260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013655|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08447|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS18265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000671|IPR023430 Peptidase A31 family|Peptidase HybD-like domain GO:0008047|GO:0008233 G3DSA:3.40.50.1450|PF01750|PR00446|PTHR30302|SSF53163|TIGR00072 MEALZ_RS18270 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001501|IPR018194|IPR029014 NiFe hydrogenase-like|Nickel-dependent hydrogenase, large subunit|Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 G3DSA:1.10.645.10|PF00374|PS00507|PTHR11993|PTHR11993:SF26|SSF56762 MEALZ_RS18275 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001821|IPR006137|IPR027394 Cytochrome-c3 hydrogenase, C-terminal|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|[NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 G3DSA:3.40.50.700|G3DSA:4.10.480.10|PF01058|PF14720|PIRSF000310|PR00614|PTHR30013|PTHR30013:SF5|SSF56770 MEALZ_RS18285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005624 Haem-degrading PF03928|PTHR34309|PTHR34309:SF3|SSF143744 MEALZ_RS18290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|PTHR30383|PTHR30383:SF5|SSF52266 MEALZ_RS18295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF509|SM00382|SSF52540 MEALZ_RS18300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30287 MEALZ_RS18305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025693 Glycine-zipper-containing OmpA-like membrane domain PF13436 MEALZ_RS18310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR013655 PAS domain|PAS fold-3 GO:0005515 G3DSA:3.30.450.20|PF08447|PTHR32089|PTHR32089:SF52|SSF55785|TIGR00229 MEALZ_RS18315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004089|IPR004090|IPR025991 Chemoreceptor zinc-binding domain|Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PF13682|PR00260|PTHR32089|PTHR32089:SF1|SM00283|SSF58104 MEALZ_RS18320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR000793|IPR003593|IPR004100|IPR005722|IPR017691|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATP synthase subunit beta, bacterial and archaeal|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex beta subunit/V1 complex, C-terminal|ATPase, F1 complex, beta subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PS00152|PTHR15184|PTHR15184:SF8|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039|TIGR03305 MEALZ_RS18325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001469|IPR020546|IPR024037 ATPase, F1 complex, delta/epsilon subunit|ATPase, F1 complex, delta/epsilon subunit, N-terminal|Alternate F1F0 ATPase, F1 subunit epsilon GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:2.60.15.10|MF_00530|PF02823|PTHR13822|SSF51344|TIGR03166 MEALZ_RS18330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011744|IPR032820 F0F1-ATPase subunit, putative|Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PF09527|TIGR02230 MEALZ_RS18335 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017581 N-ATPase, AtpR subunit-like PF12966|TIGR03165 MEALZ_RS18340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000568|IPR017692|IPR023011 ATPase, F0 complex, subunit A|ATPase, F0 complex, subunit A, active site|Alternate F1F0 ATPase, F0 subunit A GO:0015078|GO:0015986 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|PTHR11410|PTHR11410:SF7|SSF81336|TIGR01131|TIGR03306 MEALZ_RS18345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000454|IPR002379|IPR005953|IPR017708 ATPase, F0 complex, subunit C|ATPase, F0 complex, subunit C, bacterial/archaeal|ATPase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PTHR10031|SSF81333|TIGR01260|TIGR03322 MEALZ_RS18350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002146|IPR017707 ATPase, F0 complex, subunit B/B', bacterial/chloroplast|Alternate F1F0 ATPase, F0 subunit B GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430|PTHR33445|TIGR03321 MEALZ_RS18355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR017710|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATPase, F1 complex alpha/beta subunit, N-terminal domain|ATPase, F1 complex, alpha subunit|ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|Alternate F1F0 ATPase, F1 subunit alpha|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015991|GO:0015992|GO:0016820|GO:0033178|GO:0045261|GO:0046034|GO:0046933|GO:0046961 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PS00152|PTHR15184|PTHR15184:SF3|SSF47917|SSF50615|SSF52540|TIGR00962|TIGR03324 MEALZ_RS18360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000131|IPR017709|IPR023633 ATPase, F1 complex, gamma subunit|ATPase, F1 complex, gamma subunit domain|Alternate F1F0 ATPase, F1 subunit gamma GO:0015986|GO:0045261|GO:0046933|GO:0046961 G3DSA:1.10.287.80|G3DSA:3.40.1380.10|PF00231|PR00126|PTHR11693|SSF52943|TIGR03323 MEALZ_RS18365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS18370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS18375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011008|IPR013097 Dimeric alpha-beta barrel|Stress responsive alpha-beta barrel G3DSA:3.30.70.900|PF07876|SM00886|SSF54909 MEALZ_RS18380 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002125|IPR016192|IPR016193 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminases, zinc-binding|Cytidine deaminase-like GO:0003824|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PS00903|PTHR11079|SSF53927 MEALZ_RS18390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000713|IPR004101|IPR005757|IPR013221|IPR016040 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|Murein peptide ligase|NAD(P)-binding domain GO:0005524|GO:0009058|GO:0009252|GO:0016874|GO:0016881|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_02020|PF01225|PF02875|PF08245|PTHR23135|PTHR23135:SF17|SSF51984|SSF53244|SSF53623|TIGR01081 MEALZ_RS18395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001155|IPR013785 Aldolase-type TIM barrel|NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0003824|GO:0010181|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PF00724|PTHR22893|PTHR22893:SF14|SSF51395 MEALZ_RS18400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR004089|IPR013655 Methyl-accepting chemotaxis protein (MCP) signalling domain|PAS domain|PAS fold-3 GO:0004871|GO:0005515|GO:0007165|GO:0016020 G3DSA:1.10.287.950|G3DSA:3.30.450.20|PF00015|PF08447|PTHR32089|PTHR32089:SF44|SM00091|SM00283|SSF55785|SSF58104|TIGR00229 MEALZ_RS18405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008269|IPR014721|IPR020568|IPR027065|IPR027417 Lon protease|P-loop containing nucleoside triphosphate hydrolase|Peptidase S16, Lon C-terminal|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0030163 G3DSA:3.30.230.10|G3DSA:3.40.50.300|PF05362|PF13654|PR00830|PTHR10046|PTHR10046:SF46|SSF52540|SSF54211 MEALZ_RS18410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013424 PEP-CTERM protein-sorting domain PF07589 MEALZ_RS18415 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR002078|IPR002197|IPR003593|IPR009057|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|DNA binding HTH domain, Fis-type|Homeodomain-like|P-loop containing nucleoside triphosphate hydrolase|PAS domain|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PF02954|PS00676|PS00688|PTHR32071|SM00382|SSF46689|SSF52540|SSF55785 MEALZ_RS18420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013976 Metal-dependent hydrolase HDOD G3DSA:1.10.3150.10|PF08668|PTHR33525|PTHR33525:SF3|SSF109604 MEALZ_RS18425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR025161 Putative transposase IS4/IS5 family|Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PF01609|PF13340|PTHR30007|PTHR30007:SF21 MEALZ_RS18435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029058 Alpha/Beta hydrolase fold G3DSA:3.40.50.1820|SSF53474 MEALZ_RS18445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000808|IPR002744|IPR019591|IPR027417 Domain of unknown function DUF59|Mrp, conserved site|Mrp/NBP35 ATP-binding protein|P-loop containing nucleoside triphosphate hydrolase GO:0005524 G3DSA:3.40.50.300|MF_02040|PF01883|PF10609|PS01215|PTHR23264|PTHR23264:SF19|SSF117916|SSF52540 MEALZ_RS18450 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008180|IPR011962|IPR029054 Deoxycytidine triphosphate deaminase|Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase|dUTPase-like GO:0006229|GO:0008829|GO:0016787|GO:0046080 G3DSA:2.70.40.10|MF_00146|PF00692|PTHR11241|PTHR11241:SF1|SSF51283|TIGR02274 MEALZ_RS18455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF558|SM00382|SSF52540 MEALZ_RS18460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000522|IPR029022 ABC transporter, BtuC-like|ABC transporter, permease protein GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|PTHR30472|PTHR30472:SF3|SSF81345 MEALZ_RS18465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|PTHR30535|PTHR30535:SF4|SSF53807 MEALZ_RS18470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011576|IPR012349|IPR014419 FMN-binding split barrel|Heme utilization protein with pyridoxamine 5'-phosphate domain|Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0016491|GO:0055114 G3DSA:2.30.110.10|PF01243|PIRSF004633|SSF50475 MEALZ_RS18475 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 G3DSA:3.40.1570.10|PF05171|SSF144064 MEALZ_RS18495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000531|IPR010949|IPR011276|IPR012910 TonB-dependent haem/haemoglobin receptor|TonB-dependent haemoglobin/transferrin/lactoferrin receptor|TonB-dependent receptor, beta-barrel|TonB-dependent receptor, plug domain GO:0004872|GO:0005215|GO:0006810|GO:0016020|GO:0019867 G3DSA:2.170.130.10|G3DSA:2.40.170.20|PF00593|PF07715|PTHR32552|PTHR32552:SF18|SSF56935|TIGR01785|TIGR01786 MEALZ_RS18505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013783 Immunoglobulin-like fold G3DSA:2.60.40.10 MEALZ_RS18525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 PF04116|PTHR21624|PTHR21624:SF2 MEALZ_RS18530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR026461|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases|Transferase 2, rSAM/selenodomain-associated G3DSA:3.90.550.10|PF00535|PTHR10859|PTHR10859:SF92|SSF53448|TIGR04283 MEALZ_RS18535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PTHR32309|PTHR32309:SF13|SSF56349 MEALZ_RS18540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000330|IPR001650|IPR007527|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain|Zinc finger, SWIM-type GO:0005524|GO:0008270 G3DSA:3.40.50.300|PF00176|PF00271|PF04434|PTHR10799|SM00487|SM00490|SSF52540 MEALZ_RS18545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021409 Protein of unknown function DUF3047 PF11249 MEALZ_RS18560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR011010|IPR013762|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PTHR30349|PTHR30349:SF20|SSF56349 MEALZ_RS18570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002145|IPR010985 Ribbon-helix-helix|Ribbon-helix-helix protein, CopG GO:0006355 PF01402|SSF47598 MEALZ_RS18580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009075|IPR009100|IPR013107|IPR013786 Acyl-CoA dehydrogenase, C-terminal domain|Acyl-CoA dehydrogenase/oxidase C-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal|Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0050660|GO:0055114 G3DSA:1.10.540.10|G3DSA:1.20.140.10|G3DSA:2.40.110.10|PF02771|PF08028|PIRSF016578|PTHR10909|PTHR10909:SF316|SSF47203|SSF56645 MEALZ_RS18590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000771|IPR006412|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, Calvin cycle subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|PTHR30304|SSF51569|TIGR00167|TIGR01521 MEALZ_RS18595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009614 Toxin YoeB GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116 MEALZ_RS18600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 MEALZ_RS18605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PF02604|PTHR33713|PTHR33713:SF1|SSF143120 MEALZ_RS18610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PF05016|PTHR35601|PTHR35601:SF1|SSF143011 MEALZ_RS18615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR013321|IPR022789 Antitoxin ParD|Arc-type ribbon-helix-helix|Ribbon-helix-helix GO:0006355 G3DSA:1.10.1220.10|PF03693|PTHR36582|PTHR36582:SF2|SSF47598|TIGR02606 MEALZ_RS18620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007712|IPR028344 Toxin-antitoxin system, RelE/ParE toxin family|Toxin-antitoxin system, toxin component ParE1/4 PF05016|PIRSF029218|PTHR33755|PTHR33755:SF3 MEALZ_RS18625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|PTHR34322|PTHR34322:SF1|SM01321|SSF143422 MEALZ_RS18640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010985|IPR022789 Antitoxin ParD|Ribbon-helix-helix GO:0006355 PF03693|SSF47598 MEALZ_RS18645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007263 Protein of unknown function DUF393 PF04134|PTHR34290 MEALZ_RS18650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001094|IPR001433|IPR001709|IPR003097|IPR008254|IPR010199|IPR017938|IPR023173|IPR029039 FAD-binding, type 1|Flavodoxin-like|Flavodoxin/nitric oxide synthase|Flavoprotein pyridine nucleotide cytochrome reductase|Flavoprotein-like domain|NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel|Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0016491|GO:0019344|GO:0050660|GO:0055114 G3DSA:1.20.990.10|G3DSA:2.40.30.10|G3DSA:3.40.50.360|G3DSA:3.40.50.80|PF00175|PF00258|PF00667|PIRSF000207|PR00369|PR00371|PTHR19384|SSF52218|SSF52343|SSF63380|TIGR01931 MEALZ_RS18655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005117|IPR006066|IPR006067|IPR011786 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site|Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0016491|GO:0020037|GO:0050661|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|MF_01540|PF01077|PF03460|PR00397|PS00365|PTHR11493|PTHR11493:SF47|SSF55124|SSF56014|TIGR02041 MEALZ_RS18665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005262 Conserved hypothetical protein CHP00661 G3DSA:3.40.50.2000|PF13528|SSF53756|TIGR00661 MEALZ_RS18670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase G3DSA:1.20.144.10|PF01569|PTHR14969|SM00014|SSF48317 MEALZ_RS18680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|PTHR34990|PTHR34990:SF2|SSF56300 MEALZ_RS18685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021382 Protein of unknown function DUF3014 PF11219 MEALZ_RS18695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021826|IPR027820|IPR031100 Domain of unknown function DUF4478|LOG family|Protein of unknown function DUF3412 G3DSA:3.30.1850.10|G3DSA:3.40.50.450|PF03641|PF11892|PF14793|PTHR31223|PTHR31223:SF12|SSF102405 MEALZ_RS18700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001633|IPR013655|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAS domain|PAS fold-3 GO:0005515 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF08447|PTHR10799|PTHR10799:SF774|SM00052|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS18720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006697|IPR011335|IPR013986|IPR027417 DExx box DNA helicase domain|P-loop containing nucleoside triphosphate hydrolase|RecBCD enzyme subunit RecC|Restriction endonuclease type II-like GO:0008854|GO:0009338 G3DSA:1.10.10.160|MF_01486|PF04257|PIRSF000980|PTHR30591|PTHR30591:SF1|SSF52540|SSF52980|TIGR01450 MEALZ_RS18725 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 MEALZ_RS18730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003399 Mce/MlaD PF02470 MEALZ_RS18735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF567|SM00382|SSF52540 MEALZ_RS18740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|PTHR30188|PTHR30188:SF3|TIGR00056 MEALZ_RS18750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|SSF46626 MEALZ_RS18755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR019546|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal GO:0016787 G3DSA:3.60.21.10|PF00149|PF10518|SSF56300 MEALZ_RS18760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004852|IPR009056|IPR026259 Cytochrome c-like domain|Di-c-type haem protein, MauG/cytochrome c peroxidase|Di-haem cytochrome c peroxidase GO:0009055|GO:0016491|GO:0020037|GO:0055114 G3DSA:1.10.760.10|PF03150|PIRSF000294|PTHR30600|PTHR30600:SF7|SSF46626 MEALZ_RS18765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR013767|IPR029787 EAL domain|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold GO:0006355 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00989|PF00990|PF13426|PTHR10799|PTHR10799:SF774|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS18770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000673|IPR000780|IPR001610|IPR013767|IPR022641|IPR022642|IPR029063 Chemotaxis receptor methyltransferase CheR, N-terminal|MCP methyltransferase, CheR-type|MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal|PAC motif|PAS domain|PAS fold|S-adenosyl-L-methionine-dependent methyltransferase|Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006355|GO:0006935|GO:0008757|GO:0008984 G3DSA:1.10.155.10|G3DSA:3.30.450.20|G3DSA:3.40.50.150|G3DSA:3.40.50.180|PF00989|PF01339|PF01739|PF03705|PF13426|PF13596|PR00996|PTHR24422|PTHR24422:SF6|SM00086|SM00091|SM00138|SSF47757|SSF52738|SSF53335|SSF55785|TIGR00229 MEALZ_RS18780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase|Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal GO:0006520 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|PTHR11707|PTHR11707:SF3|SM00870|SSF53774 MEALZ_RS18785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001796|IPR012259|IPR017925|IPR024072 Dihydrofolate reductase|Dihydrofolate reductase conserved site|Dihydrofolate reductase domain|Dihydrofolate reductase-like domain GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 G3DSA:3.40.430.10|PF00186|PIRSF000194|PR00070|PS00075|PTHR22778|PTHR22778:SF16|SSF53597 MEALZ_RS18790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002355|IPR008972|IPR011706|IPR011707 Cupredoxin|Multicopper oxidase, copper-binding site|Multicopper oxidase, type 2|Multicopper oxidase, type 3 GO:0005507|GO:0016491|GO:0055114 G3DSA:2.60.40.420|PF07731|PF07732|PS00080|PTHR11709|PTHR11709:SF2|SSF49503 MEALZ_RS18795 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007421 Schlafen, AAA domain GO:0005524 PF04326 MEALZ_RS18800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009614 Toxin YoeB GO:0004519|GO:0006401 PF06769|PTHR38039|PTHR38039:SF1|SSF143011|TIGR02116 MEALZ_RS18805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM G3DSA:3.40.1620.10|PF02604|PTHR33713|PTHR33713:SF6|SSF143120|TIGR01552 MEALZ_RS18820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004617|IPR004843|IPR006186|IPR029052 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical)|Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0008803|GO:0016787 G3DSA:3.60.21.10|MF_00199|PF00149|PIRSF000903|PR00114|PTHR24032|PTHR24032:SF27|SSF56300|TIGR00668 MEALZ_RS18825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007474|IPR023065 ApaG domain|Uncharacterised protein family ApaG G3DSA:2.60.40.1470|MF_00791|PF04379|PTHR14289|SSF110069 MEALZ_RS18830 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002110|IPR020683 Ankyrin repeat|Ankyrin repeat-containing domain GO:0005515 G3DSA:1.25.40.20|PF12796|PR01415|PTHR24188|SM00248|SSF48403 MEALZ_RS18835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS18840 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS18850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004790|IPR018247|IPR019818|IPR024084 EF-Hand 1, calcium-binding site|Isocitrate dehydrogenase NADP-dependent|Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0004450|GO:0006102|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PIRSF000108|PS00018|PS00470|PTHR11822|SM01329|SSF53659|TIGR00127 MEALZ_RS18855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006143|IPR029063|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0016020|GO:0055085 G3DSA:2.40.50.100|G3DSA:3.40.50.150|PF16576|PTHR30469|SSF111369|TIGR01730 MEALZ_RS18860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF86|SM00382|SSF52540 MEALZ_RS18865 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007473|IPR029063 Ribosomal RNA large subunit methyltransferase J|S-adenosyl-L-methionine-dependent methyltransferase GO:0008649|GO:0070475 G3DSA:3.40.50.150|MF_00934|PF04378|PTHR37426|PTHR37426:SF1|SSF53335 MEALZ_RS18875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR011006 CheY-like superfamily|Signal transduction response regulator, receiver domain GO:0000160 G3DSA:3.40.50.2300|PF00072|PTHR26402|SM00448|SSF52172 MEALZ_RS18880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003660|IPR003661|IPR004358 HAMP domain|Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0004871|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF00672|PF02518|PR00344|PTHR24423|PTHR24423:SF531|SM00304|SM00387|SM00388|SSF158472|SSF47384|SSF55874 MEALZ_RS18885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF530|SM00448|SM00862|SSF46894|SSF52172 MEALZ_RS18890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012899 LTXXQ motif family protein GO:0042597 PF07813 MEALZ_RS18900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS18905 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS18910 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005900|IPR006148 6-phosphogluconolactonase, DevB-type|Glucosamine/galactosamine-6-phosphate isomerase GO:0005975|GO:0006098|GO:0017057 G3DSA:3.40.50.1360|PF01182|PTHR11054|SSF100950|TIGR01198 MEALZ_RS18915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007484 Peptidase M28 G3DSA:3.40.630.10|PF04389|PTHR12147|SSF53187 MEALZ_RS18920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021799 Protein of unknown function DUF3368 PF11848|PTHR39550|PTHR39550:SF1 MEALZ_RS18925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005368 Uncharacterised protein family UPF0175 PF03683|SSF143120 MEALZ_RS18930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011042|IPR011659|IPR011990 Six-bladed beta-propeller, TolB-like|Tetratricopeptide-like helical domain|WD40-like Beta Propeller GO:0005515 G3DSA:1.25.40.10|G3DSA:2.120.10.30|PF07676|SSF48452|SSF82171 MEALZ_RS18935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008309 Uncharacterised conserved protein UCP025560 PF07027 MEALZ_RS18950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003706|IPR025299 CstA, C-terminal domain|CstA, N-terminal domain GO:0009267|GO:0016020 PF02554|PF13722|PTHR30252|PTHR30252:SF0 MEALZ_RS18960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016300|IPR025723|IPR027417 Anion-transporting ATPase-like domain|Arsenical pump ATPase, ArsA/GET3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF02374|PTHR10803|PTHR10803:SF0|SSF52540|TIGR00345 MEALZ_RS18970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004843|IPR022507|IPR029052 Calcineurin-like phosphoesterase domain, apaH type|Metallo-dependent phosphatase-like|Metallophosphoesterase, RPA4764 GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300|TIGR03768 MEALZ_RS18975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012310|IPR012340|IPR029319 DNA ligase, ATP-dependent, central|DNA ligase, OB-like domain|Nucleic acid-binding, OB-fold GO:0003910|GO:0005524|GO:0006281|GO:0006310 G3DSA:2.40.50.140|G3DSA:3.30.1490.70|G3DSA:3.30.470.30|PF01068|PF14743|PTHR10459|PTHR10459:SF61|SSF50249|SSF56091 MEALZ_RS18990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR029787 GGDEF domain|Nucleotide cyclase G3DSA:3.30.70.270|PF00990|PTHR10799|PTHR10799:SF750|SM00267|SSF55073|TIGR00254 MEALZ_RS18995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025714|IPR029063 Methyltransferase domain|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF13847|PTHR10108|SSF53335 MEALZ_RS19000 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 G3DSA:3.40.50.1580|PTHR37822|SSF53167 MEALZ_RS19005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 PF04353 MEALZ_RS19010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005372 Uncharacterised protein family UPF0182 GO:0016021 PF03699|PTHR39344 MEALZ_RS19015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011031|IPR023155 Cytochrome c-552/4|Multihaem cytochrome G3DSA:1.10.710.10|PF13435|SSF48695 MEALZ_RS19020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001930|IPR012779|IPR014782|IPR024601 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase|Peptidase M1, alanyl aminopeptidase|Peptidase M1, alanyl aminopeptidase, C-terminal|Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0006508|GO:0008237|GO:0008270 G3DSA:1.10.390.10|G3DSA:1.25.50.10|PF01433|PF11940|PR00756|PTHR11533|PTHR11533:SF152|SSF55486|SSF63737|TIGR02414 MEALZ_RS19025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006696 Protein of unknown function DUF423 PF04241|PTHR10584|PTHR10584:SF191 MEALZ_RS19030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001453|IPR008284|IPR012245|IPR013484 MoaB/Mog domain|Molybdenum cofactor biosynthesis protein B, proteobacteria|Molybdenum cofactor biosynthesis protein MoaB|Molybdenum cofactor biosynthesis, conserved site GO:0006777 G3DSA:3.40.980.10|PF00994|PIRSF006443|PS01078|PTHR10192|PTHR10192:SF18|SM00852|SSF53218|TIGR00177|TIGR02667 MEALZ_RS19035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|PTHR22939|PTHR22939:SF101|SM00228|SSF50156|SSF50494|TIGR02037 MEALZ_RS19040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR001763|IPR014710|IPR018490 Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|Rhodanese-like domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|G3DSA:3.40.250.10|PF00027|PF00581|PR00103|PTHR11635|SM00100|SM00450|SSF51206|SSF52821 MEALZ_RS19045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|PTHR15238|SSF57829|TIGR01023 MEALZ_RS19050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001383|IPR026569 Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|PTHR13528|SSF143800|TIGR00009 MEALZ_RS19055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004215|IPR004218|IPR006284|IPR013815|IPR013816|IPR016185 ATP-grasp fold, subdomain 1|ATP-grasp fold, subdomain 2|Glutathione synthetase, prokaryotic|Pre-ATP-grasp domain|Prokaryotic glutathione synthetase, ATP-binding|Prokaryotic glutathione synthetase, N-terminal GO:0003824|GO:0004363|GO:0005524|GO:0005829|GO:0006750 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00162|PF02951|PF02955|PTHR21621|PTHR21621:SF4|SSF52440|SSF56059|TIGR01380 MEALZ_RS19060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF03544|PTHR33446|PTHR33446:SF2|SSF74653|TIGR01352 MEALZ_RS19065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003774 Protein of unknown function UPF0301 G3DSA:3.30.70.1300|G3DSA:3.40.1740.10|MF_00758|PF02622|PTHR30327|PTHR30327:SF1|SSF143456 MEALZ_RS19070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|PTHR33317|SM00732|SSF53098|TIGR00250 MEALZ_RS19075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|PTHR11608|SSF53271 MEALZ_RS19080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|PTHR11405|PTHR11405:SF16|SSF53671|TIGR00670 MEALZ_RS19085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00220_B|PF01979|PTHR11647|PTHR11647:SF70|SSF51338|SSF51556|TIGR00857 MEALZ_RS19090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF13442|SSF46626 MEALZ_RS19095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|PTHR31223|PTHR31223:SF1|SSF102405|TIGR00730 MEALZ_RS19100 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006094|IPR016166|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2 GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.465.10|PF01565|PTHR10801|SSF56176 MEALZ_RS19105 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013830 SGNH hydrolase-type esterase domain G3DSA:3.40.50.1110|PF13472|SSF52266 MEALZ_RS19120 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 G3DSA:3.30.470.20|SSF56059 MEALZ_RS19125 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|PTHR24423|PTHR24423:SF474|SM00387|SM00388|SSF47384|SSF55874 MEALZ_RS19130 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|PF02353|PTHR10108|PTHR10108:SF915|SSF53335 MEALZ_RS19135 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021306 Protein of unknown function DUF2878 PF11086 MEALZ_RS19140 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003333|IPR029063 Mycolic acid cyclopropane synthase|S-adenosyl-L-methionine-dependent methyltransferase GO:0008610 G3DSA:3.40.50.150|PF02353|PIRSF003085|PTHR10108|PTHR10108:SF795|SSF53335 MEALZ_RS19145 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010775 Protein of unknown function DUF1365 PF07103|PTHR33973 MEALZ_RS19150 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002937|IPR023753 Amine oxidase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01593|PTHR10742|PTHR10742:SF275|SSF51905 MEALZ_RS19155 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005804|IPR015876 Fatty acid desaturase domain|Fatty acid desaturase, type 1, core GO:0006629|GO:0016717|GO:0055114 PF00487|PR00075|PTHR11351|PTHR11351:SF34 MEALZ_RS19160 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009959|IPR032710 NTF2-like domain|Polyketide cyclase SnoaL-like domain G3DSA:3.10.450.50|PF12680|SSF54427 MEALZ_RS19170 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system PF04365 MEALZ_RS19180 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10|SSF56935 MEALZ_RS19190 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006685|IPR010920|IPR030192 LSM domain|Mechanosensitive ion channel MscS|Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016020|GO:0016021|GO:0055085|GO:0071470 G3DSA:2.30.30.60|PF00924|PTHR30414|PTHR30414:SF0|SSF50182 MEALZ_RS19195 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007159 SpoVT-AbrB domain GO:0003677 G3DSA:2.10.260.10|PD030562|PF04014|SM00966|SSF89447|TIGR01439 MEALZ_RS19200 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003477|IPR011067 Plasmid maintenance toxin/Cell growth inhibitor|mRNA interferase PemK-like protein GO:0003677 G3DSA:2.30.30.110|PF02452|SSF50118 MEALZ_RS19205 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 MEALZ_RS19210 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001789|IPR001867|IPR011006|IPR011991|IPR016032 CheY-like superfamily|OmpR/PhoB-type DNA-binding domain|Signal transduction response regulator, C-terminal effector|Signal transduction response regulator, receiver domain|Winged helix-turn-helix DNA-binding domain GO:0000160|GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00072|PF00486|PTHR26402|PTHR26402:SF552|SM00448|SM00862|SSF46894|SSF52172 MEALZ_RS19215 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain PF04280|PTHR41542|PTHR41542:SF1|SM00978|SSF54427 MEALZ_RS19230 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006113|IPR006114|IPR006115|IPR006183|IPR006184|IPR008927|IPR012284|IPR013328|IPR016040 6-phosphogluconate dehydrogenase|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, C-terminal|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, decarboxylating|6-phosphogluconate dehydrogenase, domain 2|6-phosphogluconate dehydrogenase, domain 3|6-phosphogluconate-binding site|NAD(P)-binding domain GO:0004616|GO:0006098|GO:0016491|GO:0055114 G3DSA:1.10.1040.10|G3DSA:1.20.5.320|G3DSA:3.40.50.720|PF00393|PF03446|PIRSF000109|PR00076|PS00461|PTHR11811|SM01350|SSF48179|SSF51735|TIGR00873 MEALZ_RS19235 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001282|IPR016040|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 MEALZ_RS19240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR G3DSA:3.40.50.720|PF13561|PR00081|PTHR24321|PTHR24321:SF6|SM00822|SSF51735 MEALZ_RS19245 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006076|IPR023753 FAD dependent oxidoreductase|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF01266|PTHR13847|PTHR13847:SF44|SSF51905 MEALZ_RS19260 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001387|IPR010982|IPR013430 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain|Toxin-antitoxin system, antidote protein, HigA GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|PTHR36924|PTHR36924:SF1|SM00530|SSF47413|TIGR02607 MEALZ_RS19265 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007711 Toxin HigB-1 PF05015|PTHR40266|PTHR40266:SF2|SSF143011 MEALZ_RS19285 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010389|IPR016988 Domain of unknown function DUF989|Uncharacterised conserved protein UCP032086 PF06181|PIRSF032086 MEALZ_RS19290 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007202|IPR010207|IPR017896|IPR017900 4Fe-4S domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 G3DSA:3.30.70.20|PF00037|PF04060|PS00198|SSF54862|TIGR01944 MEALZ_RS19295 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001433|IPR001709|IPR017938 Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PR00371|PTHR19384|PTHR19384:SF69|SSF52343|SSF63380 MEALZ_RS19300 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003667|IPR011293 Electron transport complex, subunit RnfA/RsxA|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00459|PF02508|PIRSF006102|PTHR30335|TIGR01943 MEALZ_RS19305 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003667|IPR010968 Electron transport complex, RsxE|Rnf-Nqr subunit, membrane protein GO:0016020|GO:0022900 MF_00478|PF02508|PIRSF006102|PTHR30586|PTHR30586:SF0|TIGR01948 MEALZ_RS19310 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007329|IPR010209 Electron transport complex, subunit RnfG/RsxG|FMN-binding GO:0005886|GO:0009055|GO:0010181|GO:0016020|GO:0022900 MF_00479|PF04205|PIRSF006091|PTHR36118|PTHR36118:SF1|SM00900 MEALZ_RS19315 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004338|IPR011303 Electron transport complex, subunit RnfD/RsxD|NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020|GO:0016021|GO:0022900 MF_00462|PF03116|PTHR30578|PTHR30578:SF0|TIGR01946 MEALZ_RS19320 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009051|IPR010208|IPR011538|IPR017896|IPR017900|IPR019554|IPR026902 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Electron transport complex, subunit RnfC/RsxC|NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain|RnfC Barrel sandwich hybrid domain|Soluble ligand binding domain GO:0009055|GO:0016020|GO:0051536|GO:0051539 G3DSA:1.10.1060.10|G3DSA:2.40.50.100|MF_00461|PF01512|PF10531|PF13183|PF13375|PS00198|PTHR11780|PTHR11780:SF1|SSF142019|SSF46548|TIGR01945 MEALZ_RS19325 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002869|IPR002880|IPR009014|IPR011766|IPR017900|IPR019752|IPR029061|IPR033412 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0016903|GO:0030976|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|PF01558|PF01855|PF02775|PF13370|PF17147|PS00198|PTHR32154|SSF52518|SSF52922|SSF53323|SSF54862 MEALZ_RS19330 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 MEALZ_RS19340 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00474|PTHR11819 MEALZ_RS19345 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007419 BFD-like [2Fe-2S]-binding domain PF04324 MEALZ_RS19350 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021302 Protein of unknown function DUF2780, VcgC/VcgE PF11075 MEALZ_RS19355 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR008579|IPR011051|IPR014710 Domain of unknown function DUF861, cupin-3|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF05899|PTHR33271|SSF51182 MEALZ_RS19360 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023299|IPR024946|IPR027256 Arginine repressor C-terminal-like domain|HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:2.70.150.10|G3DSA:3.30.1360.40|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|PTHR24093|PTHR24093:SF50|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01511|TIGR01525 MEALZ_RS19365 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001763|IPR004099|IPR016156|IPR023753 FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain|Rhodanese-like domain GO:0016491|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.40.250.10|G3DSA:3.50.50.60|PF00581|PF02852|PF07992|PR00368|PR00411|PTHR22912|PTHR22912:SF140|SM00450|SSF51905|SSF52821|SSF55424 MEALZ_RS19370 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000771|IPR006411|IPR013785 Aldolase-type TIM barrel|Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype|Ketose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832 G3DSA:3.20.20.70|PF01116|PIRSF001359|PS00602|PS00806|PTHR30559|PTHR30559:SF0|SSF51569|TIGR00167|TIGR01520 MEALZ_RS19375 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001585|IPR004730|IPR013785|IPR018225 Aldolase-type TIM barrel|Transaldolase type 1|Transaldolase, active site|Transaldolase/Fructose-6-phosphate aldolase GO:0003824|GO:0004801|GO:0005737|GO:0005975|GO:0006098 G3DSA:3.20.20.70|MF_00492|PF00923|PS00958|PS01054|PTHR10683|PTHR10683:SF18|SSF51569|TIGR00874 MEALZ_RS19385 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033247|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase family|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|PTHR11624|PTHR11624:SF1|SM00861|SSF52518|SSF52922|TIGR00232 MEALZ_RS19390 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001347|IPR017552 3-hexulose-6-phosphate isomerase|Sugar isomerase (SIS) GO:0005975|GO:0016853|GO:0030246 G3DSA:3.40.50.10490|PF01380|PTHR10937|PTHR10937:SF11|SSF53697|TIGR03127 MEALZ_RS19395 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001754|IPR011060|IPR013785|IPR017553 3-hexulose-6-phosphate synthase|Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase domain|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0005975|GO:0006207|GO:0008152|GO:0043801 G3DSA:3.20.20.70|PF00215|PTHR35039|SM00934|SSF51366|TIGR03128 MEALZ_RS19400 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006357|IPR023214|IPR023215 HAD-like domain|HAD-superfamily hydrolase, subfamily IIA|Nitrophenylphosphatase-like domain G3DSA:3.40.50.1000|G3DSA:3.40.50.10410|PF13242|PF13344|PIRSF000915|PTHR19288|PTHR19288:SF3|SSF56784|TIGR01460 MEALZ_RS19405 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004006|IPR012736 DhaK domain|Dihydroxyacetone kinase DhaK, subunit 1 GO:0004371|GO:0006071 G3DSA:3.30.1180.20|G3DSA:3.40.50.10440|PF02733|PTHR28629|PTHR28629:SF2|SSF82549|TIGR02363 MEALZ_RS19410 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004007|IPR012737 DhaL domain|Dihydroxyacetone kinase, subunit L GO:0004371|GO:0006071|GO:0016772 PF02734|PTHR28629|SM01120|SSF101473|TIGR02365 MEALZ_RS19420 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000086|IPR015797|IPR020084 NUDIX hydrolase domain|NUDIX hydrolase domain-like|NUDIX hydrolase, conserved site GO:0016787 G3DSA:3.90.79.10|PF00293|PS00893|PTHR11839|PTHR11839:SF12|SSF55811 MEALZ_RS19425 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|PTHR18901|PTHR18901:SF7|SSF56784|TIGR01509 MEALZ_RS19430 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR023554|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|ATP-dependent RNA helicase RhlB type|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0004004|GO:0005524 G3DSA:3.40.50.300|MF_00661|PF00270|PF00271|PS00039|PTHR24031|PTHR24031:SF173|SM00487|SM00490|SSF52540 MEALZ_RS19435 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|PTHR10438|SSF52833|TIGR01068 MEALZ_RS19445 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock protein|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|PTHR15184|PTHR15184:SF34|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 MEALZ_RS19455 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007457 Fe(II) trafficking protein YggX GO:0005506 G3DSA:1.10.3880.10|MF_00686|PD029191|PF04362|PIRSF029827|PTHR36965|PTHR36965:SF1|SSF111148 MEALZ_RS19460 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000445|IPR003265|IPR005760|IPR011257|IPR015797|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF14815|PTHR10359|SM00478|SSF48150|SSF55811|TIGR01084 MEALZ_RS19465 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004039|IPR018527|IPR024922|IPR024935 Rubredoxin|Rubredoxin domain|Rubredoxin, iron-binding site|Rubredoxin-type fold GO:0005506|GO:0009055|GO:0046872 G3DSA:2.20.28.10|PF00301|PIRSF000071|PR00163|PS00202|SSF57802 MEALZ_RS19470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007844 AsmA PF05170|PTHR30441|PTHR30441:SF4 MEALZ_RS19485 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336|IPR019479|IPR024706 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Peroxiredoxin, AhpC-type|Peroxiredoxin, C-terminal|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0051920|GO:0055114 G3DSA:3.30.1020.10|G3DSA:3.40.30.10|PF00578|PF10417|PIRSF000239|PTHR10681|SSF52833 MEALZ_RS19495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF12895|PF13432|PTHR23083|SM00028|SSF48452 MEALZ_RS19500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003538|IPR006260 Gram-negative bacterial TonB protein|TonB, C-terminal GO:0006810|GO:0015343|GO:0015891|GO:0030288|GO:0031992 G3DSA:3.30.1150.10|PF03544|PR01374|PTHR33446|PTHR33446:SF1|SSF74653|TIGR01352 MEALZ_RS19505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 MEALZ_RS19510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF0 MEALZ_RS19515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898|IPR016866|IPR017270 MotA/TolQ/ExbB proton channel|Putative MotA/TolQ/ExbB family protein|Uncharacterised conserved protein UCP028069 GO:0006810|GO:0008565|GO:0016020 PF01618|PF11932|PIRSF037714|PTHR30625|PTHR30625:SF0 MEALZ_RS19520 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016866 Uncharacterised conserved protein UCP028069 PF11932|PIRSF028069 MEALZ_RS19530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002933|IPR011650|IPR017439 Amidohydrolase|Peptidase M20|Peptidase M20, dimerisation domain GO:0008152|GO:0016787 G3DSA:3.30.70.360|G3DSA:3.40.630.10|PF01546|PF07687|PIRSF005962|PTHR11014|PTHR11014:SF63|SSF53187|SSF55031|TIGR01891 MEALZ_RS19535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004637|IPR005814|IPR015421|IPR015422|IPR015424 2,4-diaminobutyrate 4-transaminase|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824|GO:0008483|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00202|PS00600|PTHR11986|PTHR11986:SF61|SSF53383|TIGR00709 MEALZ_RS19540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24, structural domain GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 MEALZ_RS19545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR015590|IPR016161|IPR016162|IPR016163 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde dehydrogenase, C-terminal|Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0016620|GO:0055114 G3DSA:3.40.309.10|G3DSA:3.40.605.10|PF00171|PTHR11699|PTHR11699:SF28|SSF53720 MEALZ_RS19550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002815 Spo11/DNA topoisomerase VI subunit A GO:0000737|GO:0003677|GO:0005694 SSF56726 MEALZ_RS19565 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021979 Protein of unknown function DUF3584 G3DSA:3.40.1140.10|PF12128 MEALZ_RS19570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 G3DSA:3.30.70.1290|PF01797|PTHR34322|PTHR34322:SF1|SM01321|SSF143422 MEALZ_RS19590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003538|IPR006260 Gram-negative bacterial TonB protein|TonB, C-terminal GO:0006810|GO:0015343|GO:0015891|GO:0030288|GO:0031992 G3DSA:3.30.1150.10|PF03544|PR01374|PTHR33446|PTHR33446:SF1|SSF74653|TIGR01352 MEALZ_RS19595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472|PTHR30558|PTHR30558:SF3 MEALZ_RS19600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625 MEALZ_RS19605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618|PTHR30625|PTHR30625:SF0 MEALZ_RS19610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016866 Uncharacterised conserved protein UCP028069 PF11932 MEALZ_RS19615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025711 PepSY domain PF03413 MEALZ_RS19620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF00665|PTHR32552|SSF53098 MEALZ_RS19625 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PF01527 MEALZ_RS19630 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|PS01086|PTHR11749|PTHR11749:SF7|SSF51366|TIGR01163 MEALZ_RS19635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000811|IPR011834|IPR024517 Alpha-glucan phosphorylase|Glycogen phosphorylase, domain of unknown function DUF3417|Glycosyl transferase, family 35 GO:0004645|GO:0005975|GO:0008184|GO:0030170 G3DSA:3.40.50.2000|PF00343|PF11897|PIRSF000460|PTHR11468|PTHR11468:SF9|SSF53756|TIGR02094 MEALZ_RS19645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|PTHR41394|PTHR41394:SF1|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 MEALZ_RS19650 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000551|IPR003759|IPR006158|IPR009061 Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355|GO:0031419|GO:0046872 G3DSA:1.10.1660.10|G3DSA:3.40.50.280|PF02607|PF13411|PTHR30204|PTHR30204:SF19|SM00422|SSF46955|SSF52242 MEALZ_RS19655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000943|IPR007627|IPR007630|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF04542|PF04545|PR00046|PS00715|PS00716|PTHR30603|SSF88659|SSF88946|TIGR02937 MEALZ_RS19660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972|IPR010201 Band 7 domain|HflK|Stomatin family GO:0016020|GO:0016021 PF01145|PTHR10264|PTHR10264:SF51|SM00244|SSF117892|TIGR01933 MEALZ_RS19665 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001107|IPR001972|IPR010200 Band 7 domain|HflC|Stomatin family GO:0016020|GO:0016021|GO:0052547 PF01145|PIRSF005651|PR00721|PTHR10264|PTHR10264:SF80|SM00244|SSF117892|TIGR01932 MEALZ_RS19670 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|PTHR23076|SM00382|SSF140990|SSF52540|TIGR01241 MEALZ_RS19680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001509|IPR010099|IPR013549|IPR016040 Domain of unknown function DUF1731|Epimerase family protein SDR39U1|NAD(P)-binding domain|NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|PF08338|PTHR11092|PTHR11092:SF0|SSF51735|TIGR01777 MEALZ_RS19685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001412|IPR002547|IPR004495|IPR009080|IPR012340|IPR014729|IPR014758|IPR015413|IPR023458|IPR029038 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding|Aminoacyl-tRNA synthetase, class I, conserved site|Methionine-tRNA ligase, type 1|Methionyl-tRNA synthetase|Methionyl-tRNA synthetase, Zn-domain|Methionyl-tRNA synthetase, beta subunit, C-terminal|Methionyl/Leucyl tRNA synthetase|Nucleic acid-binding, OB-fold|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-binding domain GO:0000049|GO:0000166|GO:0004812|GO:0004825|GO:0005524|GO:0005737|GO:0006418|GO:0006431 G3DSA:1.10.730.10|G3DSA:2.20.28.20|G3DSA:2.40.50.140|G3DSA:3.40.50.620|MF_00098|PF01588|PF09334|PR01041|PS00178|PTHR11946|PTHR11946:SF86|SSF47323|SSF50249|SSF52374|SSF57770|TIGR00398|TIGR00399 MEALZ_RS19690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic G3DSA:2.40.50.100|PF13437|PTHR32347|PTHR32347:SF12|SSF111369 MEALZ_RS19695 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687|PTHR30489|PTHR30489:SF0 MEALZ_RS19700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|PTHR24220|PTHR24220:SF577|SM00382|SSF52540 MEALZ_RS19705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002139|IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase|Ribokinase-like GO:0004747|GO:0006014|GO:0016773 G3DSA:3.40.1190.20|PF00294|PR00990|PS00584|PTHR10584|PTHR10584:SF157|SSF53613 MEALZ_RS19710 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000914 Solute-binding protein family 5 domain G3DSA:3.10.105.10|PF00496|PTHR30290|PTHR30290:SF29|SSF53850 MEALZ_RS19715 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 PF00528|PTHR30465|PTHR30465:SF45|SSF161098 MEALZ_RS19720 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|PTHR30465|PTHR30465:SF9|SSF161098 MEALZ_RS19730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000816|IPR016125|IPR029762 Peptidase C15, pyroglutamyl peptidase I|Peptidase C15, pyroglutamyl peptidase I-like|Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 G3DSA:3.40.630.20|PF01470|PIRSF015592|PR00706|PS01334|PTHR23402|PTHR23402:SF1|SSF53182|TIGR00504 MEALZ_RS19735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001282|IPR016040|IPR019796|IPR022674|IPR022675 Glucose-6-phosphate dehydrogenase|Glucose-6-phosphate dehydrogenase, C-terminal|Glucose-6-phosphate dehydrogenase, NAD-binding|Glucose-6-phosphate dehydrogenase, active site|NAD(P)-binding domain GO:0004345|GO:0006006|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00966|PF00479|PF02781|PIRSF000110|PR00079|PS00069|PTHR23429|PTHR23429:SF0|SSF51735|SSF55347|TIGR00871 MEALZ_RS19740 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000866|IPR012336 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant|Thioredoxin-like fold GO:0016209|GO:0016491|GO:0055114 G3DSA:3.40.30.10|PF00578|PTHR10681|PTHR10681:SF91|SSF52833 MEALZ_RS19745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000595|IPR011991|IPR012318|IPR014710|IPR018490 Crp-type HTH domain|Cyclic nucleotide-binding domain|Cyclic nucleotide-binding-like|RmlC-like jelly roll fold|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:2.60.120.10|PF00027|PF13545|PR00034|PTHR24567|PTHR24567:SF28|SM00100|SM00419|SSF46785|SSF51206 MEALZ_RS19750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001845|IPR011991|IPR018334 ArsR-type transcription regulator, HTH motif|HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PS00846|PTHR33154|SM00418|SSF46785 MEALZ_RS19760 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025738 Aerotolerance-related protein BatD PF13584|PTHR40940|PTHR40940:SF1 MEALZ_RS19765 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001440|IPR002035|IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide repeat 1|Tetratricopeptide-like helical domain|von Willebrand factor, type A GO:0005515 G3DSA:1.25.40.10|PF00515|PF13519|PTHR22550|PTHR22550:SF5|SM00028|SM00327|SSF48452|SSF53300 MEALZ_RS19770 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|PF00092|PTHR22550|PTHR22550:SF12|SM00327|SSF53300 MEALZ_RS19775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025489 Protein of unknown function (DUF4381 PF14316 MEALZ_RS19780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002881 Domain of unknown function DUF58 PF01882|PTHR33608|PTHR33608:SF6 MEALZ_RS19785 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011703|IPR016366|IPR027417 ATPase chaperone, AAA-type, MoxR, predicted|ATPase, AAA-3|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.10.8.300|G3DSA:3.40.50.300|PF07726|PIRSF002849|PTHR11603|PTHR11603:SF148|SSF52540 MEALZ_RS19790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000109|IPR018456|IPR020846 Major facilitator superfamily domain|PTR2 family proton/oligopeptide symporter, conserved site|Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0006857|GO:0016020 G3DSA:1.20.1250.20|PF00854|PS01022|PS01023|PTHR11654|SSF103473 MEALZ_RS19800 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002347|IPR016040|IPR020904 NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR|Short-chain dehydrogenase/reductase, conserved site GO:0016491 G3DSA:3.40.50.720|PF00106|PR00080|PR00081|PS00061|PTHR24322|PTHR24322:SF463|SSF51735 MEALZ_RS19805 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR017143|IPR025990 Cysteine-rich CPXCG protein|Uncharacterised conserved protein UCP037225 PF14255|PIRSF037225 MEALZ_RS19815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal PF06791 MEALZ_RS19820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003615|IPR016177 DNA-binding domain|HNH nuclease GO:0003677 PF13392|SSF54060|SSF54171 MEALZ_RS19825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007684 Zinc finger, Ogr/Delta-type PF04606 MEALZ_RS19850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009270 Domain of unknown function DUF927 PF06048 MEALZ_RS19860 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR010260 Prophage CP4-57 regulatory protein (AlpA) PF05930 MEALZ_RS19890 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012933 HicA mRNA interferase family GO:0003729 G3DSA:3.30.920.30|PF07927|SSF54786 MEALZ_RS19895 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF143100 MEALZ_RS19900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002104|IPR011010|IPR013762|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Domain of unknown function DUF4102|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|PF00589|PF13356|PTHR30629|PTHR30629:SF3|SSF56349 MEALZ_RS19915 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027266|IPR027368|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE|tRNA modification GTPase MnmE domain 2 GO:0003924|GO:0005515|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|G3DSA:3.40.50.300|MF_00379|PF01926|PF10396|PF12631|PTHR11649|PTHR11649:SF56|SSF116878|SSF52540|TIGR00231|TIGR00450 MEALZ_RS19920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PR01900|PTHR12428|PTHR12428:SF14|TIGR03592|TIGR03593 MEALZ_RS19925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000100|IPR014721|IPR020568 Ribonuclease P|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PTHR33992|SSF54211|TIGR00188 MEALZ_RS20220 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009 Protein kinase domain|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|PF00069|PS00108|PTHR24362|PTHR24362:SF160|SSF56112 MEALZ_RS20240 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003018|IPR003661|IPR029016 GAF domain|GAF domain-like|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0005515|GO:0007165 G3DSA:3.30.450.40|PF13185|SM00065|SSF47384|SSF55781 MEALZ_RS20470 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|PF00664|SSF90123 MEALZ_RS20495 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021255 Putative auto-transporter adhesin, head GIN domain PF10988|PTHR39200|PTHR39200:SF1 MEALZ_RS20500 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006664|IPR006665 OmpA-like domain|Outer membrane protein, bacterial GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|PTHR30128|SSF103088 MEALZ_RS20505 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009|IPR017441|IPR025493 Domain of unknown function DUF4384|Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PF14326|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SSF56112 MEALZ_RS20510 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025455 Protein of unknown function DUF4276 PF14103 MEALZ_RS20515 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025455 Protein of unknown function DUF4276 PF14103 MEALZ_RS20525 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610 MEALZ_RS20530 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002810|IPR012340|IPR018770|IPR029045 5-bromo-4-chloroindolyl phosphate hydrolysis protein|ClpP/crotonase-like domain|NfeD-like, C-terminal domain|Nucleic acid-binding, OB-fold G3DSA:2.40.50.140|G3DSA:3.90.226.10|PF01957|PF10112|PTHR33507|PTHR33507:SF1|SSF141322|SSF52096 MEALZ_RS20535 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025475 Protein of unknown function DUF4326) PF14216 MEALZ_RS20540 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF02518|PF08447|PF13188|PF13426|PR00344|PTHR24423|PTHR24423:SF486|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS20545 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000209|IPR016134|IPR018247|IPR023828 Dockerin domain|EF-Hand 1, calcium-binding site|Peptidase S8, subtilisin, Ser-active site|Peptidase S8/S53 domain GO:0000272|GO:0004252|GO:0006508 G3DSA:1.10.1330.10|G3DSA:3.40.50.200|PF00082|PS00018|PS00138|SSF52743|SSF63446 MEALZ_RS20550 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR026881 WYL domain PF13280|PTHR34580 MEALZ_RS20560 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000160|IPR000719|IPR003018|IPR011009|IPR011990|IPR027417|IPR029016|IPR029787 GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|P-loop containing nucleoside triphosphate hydrolase|Protein kinase domain|Protein kinase-like domain|Tetratricopeptide-like helical domain GO:0004672|GO:0005515|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:1.25.40.10|G3DSA:3.30.200.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|G3DSA:3.40.50.300|PF00069|PF00990|PF13185|PF13191|PTHR16305|PTHR16305:SF31|SM00065|SM00220|SM00267|SSF48452|SSF52540|SSF55073|SSF55781|SSF56112|TIGR00254 MEALZ_RS20570 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|PTHR22916|PTHR22916:SF4|SSF53448 MEALZ_RS20575 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|PTHR12526|PTHR12526:SF387|SSF53756 MEALZ_RS20580 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PF14690 MEALZ_RS20585 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610 MEALZ_RS20590 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PF01610 MEALZ_RS20595 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665|IPR008023 OmpA-like domain|Protein of unknown function DUF748 G3DSA:3.30.1330.60|PF05359 MEALZ_RS20600 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR011620|IPR013655 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0000160|GO:0004673|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772|GO:0071555 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF07694|PF08447|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS20605 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003018|IPR013656|IPR029016 GAF domain|GAF domain-like|PAC motif|PAS domain|PAS fold-4 GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.450.40|PF08448|PF13185|PF13426|PTHR24423|SM00065|SM00086|SM00091|SSF55781|SSF55785|TIGR00229 MEALZ_RS20610 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021136 Flagellar hook-length control protein-like, C-terminal PF02120|PTHR37533|PTHR37533:SF2 MEALZ_RS20615 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR024079 Metallopeptidase, catalytic domain GO:0008237 G3DSA:3.40.390.10|PF13582|SSF55486 MEALZ_RS20620 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003660|IPR003661|IPR004358|IPR008207|IPR011006|IPR013767|IPR033479 CheY-like superfamily|Double Cache domain 1|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0006355|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF00989|PF01627|PF02518|PF02743|PF13426|PR00344|PTHR24423|PTHR24423:SF486|SM00086|SM00091|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS20635 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902 Prokaryotic N-terminal methylation site PF13544|TIGR02532 MEALZ_RS20640 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902|IPR022346 General secretion pathway, GspH|Prokaryotic N-terminal methylation site GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF12019|PF13633|PS00409|SSF54523|TIGR02532 MEALZ_RS20645 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR012902|IPR022346 General secretion pathway, GspH|Prokaryotic N-terminal methylation site GO:0008565|GO:0015627|GO:0015628 G3DSA:3.30.700.10|PF12019|SSF54523|TIGR02532 MEALZ_RS20655 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006597|IPR011990|IPR015917|IPR029030 Caspase-like domain|Peptidase C14A, caspase catalytic domain|Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0006915|GO:0008234 G3DSA:1.25.40.10|G3DSA:3.40.50.1460|PF00656|PF08238|PTHR22576|PTHR22576:SF30|SM00115|SM00671|SSF52129|SSF81901 MEALZ_RS20660 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007627|IPR011991|IPR013249|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor 70, region 4 type 2|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 2|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.1740.10|PF04542|PF08281|PTHR30173|SSF88659|SSF88946|TIGR02937 MEALZ_RS20680 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR019707 Winged helix-turn-helix domain (DUF2582) PF10771 MEALZ_RS20685 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 G3DSA:1.10.760.10|PF00034|PTHR33751|SSF46626 MEALZ_RS20690 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001789|IPR011006|IPR013655|IPR013656|IPR029787 CheY-like superfamily|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction response regulator, receiver domain GO:0000160|GO:0005515 G3DSA:3.30.450.20|G3DSA:3.30.70.270|G3DSA:3.40.50.2300|PF00072|PF00990|PF08447|PF08448|PF13426|PTHR24423|SM00086|SM00091|SM00267|SM00448|SSF52172|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS20700 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001932|IPR015655|IPR017748 PPM-type phosphatase domain|Protein phosphatase 2C family|Type VI secretion system-associated, BMAA0400 GO:0003824|GO:0004722|GO:0006470 G3DSA:3.40.1730.10|G3DSA:3.60.40.10|PF09867|PF13672|PTHR13832|PTHR13832:SF278|SM00331|SM00332|SSF81606|TIGR03373 MEALZ_RS20705 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002559|IPR012337|IPR014736 Ribonuclease H-like domain|Transposase, IS4-like|Transposase, Tn5-like, core GO:0003676|GO:0003677|GO:0004803|GO:0006313 G3DSA:3.90.350.10|PF01609|SSF53098 MEALZ_RS20730 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009|IPR011460|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Protein of unknown function DUF1566|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PF07603|PS00107|PS00108|PTHR24362|PTHR24362:SF160|SM00220|SSF56112 MEALZ_RS20735 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000253|IPR008984 Forkhead-associated (FHA) domain|SMAD/FHA domain GO:0005515 G3DSA:2.60.200.20|PF00498|SSF49879 MEALZ_RS20745 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021676 Protein of unknown function DUF3262 PF11660 MEALZ_RS20750 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR022260 Integrating conjugative element protein PilL, PFGI-1 TIGR03748 MEALZ_RS20755 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007362 Protein of unknown function DUF429 PF04250 MEALZ_RS20775 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR007895|IPR013656 Histidine kinase-like ATPase, C-terminal domain|MASE1|PAC motif|PAS domain|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF02518|PF05231|PF08448|PF13188|PF13426|PR00344|PTHR24423|SM00086|SM00091|SM00387|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS20780 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PF13692|SSF53756 MEALZ_RS20790 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR011006|IPR013655|IPR013656|IPR013767 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00989|PF02518|PF08447|PF08448|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS20810 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 MEALZ_RS20815 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|PTHR10108|SSF53335 MEALZ_RS20820 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic SSF58113 MEALZ_RS20825 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013656|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00989|PF02518|PF08447|PF08448|PF13426|PR00344|PTHR24423|PTHR24423:SF505|SM00086|SM00091|SM00387|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS20835 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000792|IPR011006|IPR011991|IPR016032 CheY-like superfamily|Signal transduction response regulator, C-terminal effector|Transcription regulator LuxR, C-terminal|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.10.10|G3DSA:3.40.50.2300|PF00196|PR00038|PS00622|PTHR26402|PTHR26402:SF588|SM00421|SSF46894|SSF52172 MEALZ_RS20845 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR016087 Chalcone isomerase GO:0016872 PF16036 MEALZ_RS20850 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF426|SM00382|SSF52540|TIGR01727 MEALZ_RS20855 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|PTHR24220|PTHR24220:SF81|SM00382|SSF52540|TIGR01727 MEALZ_RS20875 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002625 Smr domain PF01713|PTHR35562|PTHR35562:SF2|SM00463|SSF160443 MEALZ_RS20880 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR002477 Peptidoglycan binding-like G3DSA:1.10.101.10|PF01471|SSF47090 MEALZ_RS20885 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000926|IPR002734|IPR024072|IPR032677 Bacterial bifunctional deaminase-reductase, C-terminal|Dihydrofolate reductase-like domain|GTP cyclohydrolase II|GTP cyclohydrolase II, RibA GO:0003935|GO:0008703|GO:0009231|GO:0055114 G3DSA:3.40.430.10|MF_00179|PF00925|PF01872|PTHR21327|SSF142695|SSF53597|TIGR00505 MEALZ_RS20900 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10 MEALZ_RS20920 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006665 OmpA-like domain G3DSA:3.30.1330.60|PF00691|PTHR30329|PTHR30329:SF5|SSF103088 MEALZ_RS20925 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF6|SSF116734 MEALZ_RS20930 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PF04313|PTHR30195|PTHR30195:SF13 MEALZ_RS20935 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF04851|PTHR30195|PTHR30195:SF13|SM00487|SSF52540 MEALZ_RS20940 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic PTHR30195|PTHR30195:SF13 MEALZ_RS20950 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003018|IPR003607|IPR006674|IPR013655|IPR013656|IPR029016 GAF domain|GAF domain-like|HD domain|HD/PDEase domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4 GO:0005515 G3DSA:1.10.3210.10|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.40.190.10|PF01590|PF01966|PF08447|PF08448|PF12974|PF13185|PF13426|PTHR24423|PTHR24423:SF544|SM00065|SM00086|SM00091|SM00471|SSF109604|SSF53850|SSF55781|SSF55785|TIGR00229 MEALZ_RS20955 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF13426|PR00344|PTHR24423|PTHR24423:SF383|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS20960 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR007318 Phospholipid methyltransferase PF04191|PTHR12714|PTHR12714:SF7 MEALZ_RS20965 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014774|IPR027417 KaiC-like domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF06745|PR01874|PTHR22942|PTHR22942:SF43|SSF52540 MEALZ_RS20970 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR014774|IPR027417 KaiC-like domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF06745 MEALZ_RS20975 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR029035 DHS-like NAD/FAD-binding domain SSF52467 MEALZ_RS20980 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR007895|IPR029787 EAL domain|GGDEF domain|MASE1|Nucleotide cyclase|PAC motif|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF05231|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS20985 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 PF01420|PTHR30408|PTHR30408:SF2|SSF116734 MEALZ_RS20990 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021300 Integrating conjugative element protein, PFL4695 PF11072|TIGR03765 MEALZ_RS20995 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 MEALZ_RS21005 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006949 Baseplate protein J-like PF04865 MEALZ_RS21010 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006597|IPR011990 Sel1-like repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF08238|PTHR11102|SM00671|SSF81901 MEALZ_RS21015 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR004089|IPR004090|IPR025991 Chemoreceptor zinc-binding domain|Chemotaxis methyl-accepting receptor|Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0006935|GO:0007165|GO:0016020 G3DSA:1.10.287.950|PF00015|PF13682|PR00260|PTHR32089|SM00283|SSF58104 MEALZ_RS21020 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR021728 Protein of unknown function DUF3300 PF11737|PTHR40269|PTHR40269:SF1 MEALZ_RS21025 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR003018|IPR013656|IPR013767|IPR029016|IPR029787 EAL domain|GAF domain|GAF domain-like|GGDEF domain|Nucleotide cyclase|PAC motif|PAS domain|PAS fold|PAS fold-4 GO:0005515|GO:0006355 G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.70.270|PF00563|PF00989|PF00990|PF08448|PF13185|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00065|SM00086|SM00091|SM00267|SSF141868|SSF55073|SSF55781|SSF55785|TIGR00229|TIGR00254 MEALZ_RS21030 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR006189|IPR008207|IPR011006|IPR013655|IPR013656 CHASE domain|CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF03924|PF08447|PF08448|PF13426|PR00344|PTHR24423|SM00073|SM00086|SM00091|SM00387|SM00388|SM00448|SM01079|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS21035 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR009045|IPR013230 Hedgehog signalling/DD-peptidase zinc-binding domain|Peptidase M15A, C-terminal G3DSA:3.30.1380.10|PF08291|SSF55166 MEALZ_RS21040 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR025948 HTH-like domain PF13276 MEALZ_RS21045 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 MEALZ_RS21050 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003594|IPR003661|IPR004358|IPR008207|IPR011006|IPR013655 CheY-like superfamily|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:1.20.120.160|G3DSA:3.30.450.20|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF01627|PF02518|PF08447|PF12860|PF13426|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SM00448|SSF47226|SSF47384|SSF52172|SSF55785|SSF55874|TIGR00229 MEALZ_RS21055 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013767 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold|PAS fold-3|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0006355|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF00989|PF02518|PF08447|PF13426|PR00344|PTHR24423|SM00086|SM00091|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS21060 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR003594|IPR003661|IPR004358|IPR013655|IPR013656 Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|PAS fold-3|PAS fold-4|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0005515|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.565.10|PF00512|PF02518|PF08447|PF08448|PR00344|PTHR24423|SM00086|SM00387|SM00388|SSF47384|SSF55785|SSF55874|TIGR00229 MEALZ_RS21065 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 G3DSA:1.10.40.60|PF03934|PIRSF002786|PTHR38831|SSF158544 MEALZ_RS21070 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000719|IPR008271|IPR011009|IPR017441 Protein kinase domain|Protein kinase, ATP binding site|Protein kinase-like domain|Serine/threonine-protein kinase, active site GO:0004672|GO:0005524|GO:0006468 G3DSA:1.10.510.10|G3DSA:3.30.200.20|PF00069|PS00107|PS00108|PTHR24362|SM00220|SSF56112 MEALZ_RS21075 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR000160|IPR001610|IPR001633|IPR006189|IPR007895|IPR029787 CHASE domain|EAL domain|GGDEF domain|MASE1|Nucleotide cyclase|PAC motif|PAS domain G3DSA:3.20.20.450|G3DSA:3.30.450.20|G3DSA:3.30.70.270|PF00563|PF00990|PF03924|PF05231|PF13426|PTHR33121|PTHR33121:SF13|SM00052|SM00086|SM00091|SM00267|SM01079|SSF141868|SSF55073|SSF55785|TIGR00229|TIGR00254 MEALZ_RS21080 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000014|IPR001610|IPR001789|IPR003018|IPR003594|IPR003660|IPR003661|IPR004358|IPR011006|IPR029016|IPR033479 CheY-like superfamily|Double Cache domain 1|GAF domain|GAF domain-like|HAMP domain|Histidine kinase-like ATPase, C-terminal domain|PAC motif|PAS domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal|Signal transduction response regulator, receiver domain GO:0000155|GO:0000160|GO:0004871|GO:0005515|GO:0007165|GO:0016021|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.450.20|G3DSA:3.30.450.40|G3DSA:3.30.565.10|G3DSA:3.40.50.2300|PF00072|PF00512|PF00672|PF02518|PF02743|PF13185|PF13426|PR00344|PTHR24423|SM00065|SM00086|SM00091|SM00304|SM00387|SM00388|SM00448|SSF158472|SSF47384|SSF52172|SSF55781|SSF55785|SSF55874|TIGR00229 MEALZ_RS21085 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR006652|IPR015915 Kelch repeat type 1|Kelch-type beta propeller GO:0005515 G3DSA:2.120.10.80|PF01344|PTHR24412|SM00612|SSF117281 MEALZ_RS21090 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR000319|IPR002656|IPR013830 Acyltransferase 3|Aspartate-semialdehyde dehydrogenase, conserved site|SGNH hydrolase-type esterase domain GO:0004073|GO:0006520|GO:0016747|GO:0050661|GO:0055114 G3DSA:3.40.50.1110|PF01757|PS01103|PTHR23028|PTHR23028:SF53|SSF52266 MEALZ_RS21095 /var/genomes/g2d_mirror/Methylomicrobium_alcaliphilum_20Z/ASM96853v1_genomic IPR023614 Porin domain G3DSA:2.40.160.10