JT25_RS00130	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JT25_RS00130	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS00130	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JT25_RS00130	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JT25_RS00130	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS00130	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS00130	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS00130	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JT25_RS00145	PWY-5392	reductive TCA cycle II
JT25_RS00145	PWY-5537	pyruvate fermentation to acetate V
JT25_RS00145	PWY-5538	pyruvate fermentation to acetate VI
JT25_RS00145	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS00145	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS00145	PWY-6728	methylaspartate cycle
JT25_RS00145	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS00145	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS00150	PWY-5392	reductive TCA cycle II
JT25_RS00150	PWY-5537	pyruvate fermentation to acetate V
JT25_RS00150	PWY-5538	pyruvate fermentation to acetate VI
JT25_RS00150	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS00150	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS00150	PWY-6728	methylaspartate cycle
JT25_RS00150	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS00150	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS00160	PWY-6832	2-aminoethylphosphonate degradation II
JT25_RS00240	PWY-3961	phosphopantothenate biosynthesis II
JT25_RS00290	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
JT25_RS00290	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
JT25_RS00290	PWY-6148	tetrahydromethanopterin biosynthesis
JT25_RS00370	PWY-3781	aerobic respiration I (cytochrome c)
JT25_RS00370	PWY-4521	arsenite oxidation I (respiratory)
JT25_RS00370	PWY-6692	Fe(II) oxidation
JT25_RS00370	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JT25_RS00385	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
JT25_RS00390	PWY-2201	folate transformations I
JT25_RS00390	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS00395	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS00400	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS00400	PWY-6578	8-amino-7-oxononanoate biosynthesis III
JT25_RS00400	PWY-7147	8-amino-7-oxononanoate biosynthesis II
JT25_RS00405	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
JT25_RS00460	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS00460	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JT25_RS00825	PWY-6004	glycine betaine biosynthesis V (from glycine)
JT25_RS00830	PWY-5941	glycogen degradation II (eukaryotic)
JT25_RS00830	PWY-6731	starch degradation III
JT25_RS00830	PWY-6737	starch degradation V
JT25_RS00830	PWY-7238	sucrose biosynthesis II
JT25_RS00930	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS00960	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JT25_RS00960	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JT25_RS00960	PWY-5989	stearate biosynthesis II (bacteria and plants)
JT25_RS00960	PWY-5994	palmitate biosynthesis I (animals and fungi)
JT25_RS00960	PWY-6113	superpathway of mycolate biosynthesis
JT25_RS00960	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JT25_RS00960	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS00960	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS00960	PWY-7663	gondoate biosynthesis (anaerobic)
JT25_RS00960	PWY-7664	oleate biosynthesis IV (anaerobic)
JT25_RS00960	PWYG-321	mycolate biosynthesis
JT25_RS00975	PWY-5274	sulfide oxidation II (sulfide dehydrogenase)
JT25_RS01025	PWY-5350	thiosulfate disproportionation III (rhodanese)
JT25_RS01095	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
JT25_RS01100	PWY-5833	CDP-4-dehydro-3,6-dideoxy-D-glucose biosynthesis
JT25_RS01100	PWY-5940	streptomycin biosynthesis
JT25_RS01210	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
JT25_RS01215	PWY-3821	galactose degradation III
JT25_RS01215	PWY-6317	galactose degradation I (Leloir pathway)
JT25_RS01215	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JT25_RS01215	PWY-6527	stachyose degradation
JT25_RS01215	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
JT25_RS01215	PWY-7344	UDP-D-galactose biosynthesis
JT25_RS01230	PWY-3221	dTDP-L-rhamnose biosynthesis II
JT25_RS01230	PWY-6808	dTDP-D-forosamine biosynthesis
JT25_RS01230	PWY-6942	dTDP-D-desosamine biosynthesis
JT25_RS01230	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
JT25_RS01230	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
JT25_RS01230	PWY-6974	dTDP-L-olivose biosynthesis
JT25_RS01230	PWY-6976	dTDP-L-mycarose biosynthesis
JT25_RS01230	PWY-7104	dTDP-L-megosamine biosynthesis
JT25_RS01230	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
JT25_RS01230	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
JT25_RS01230	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JT25_RS01230	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
JT25_RS01230	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
JT25_RS01230	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
JT25_RS01230	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
JT25_RS01230	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
JT25_RS01230	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
JT25_RS01230	PWY-7688	JT25_RS01230
JT25_RS01240	PWY-3221	dTDP-L-rhamnose biosynthesis II
JT25_RS01240	PWY-6808	dTDP-D-forosamine biosynthesis
JT25_RS01240	PWY-6942	dTDP-D-desosamine biosynthesis
JT25_RS01240	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
JT25_RS01240	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
JT25_RS01240	PWY-6974	dTDP-L-olivose biosynthesis
JT25_RS01240	PWY-6976	dTDP-L-mycarose biosynthesis
JT25_RS01240	PWY-7104	dTDP-L-megosamine biosynthesis
JT25_RS01240	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
JT25_RS01240	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
JT25_RS01240	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JT25_RS01240	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
JT25_RS01240	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
JT25_RS01240	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
JT25_RS01240	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
JT25_RS01240	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
JT25_RS01240	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
JT25_RS01240	PWY-7688	JT25_RS01240
JT25_RS01295	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JT25_RS01295	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JT25_RS01295	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
JT25_RS01405	PWY-181	photorespiration
JT25_RS01410	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
JT25_RS01410	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
JT25_RS01410	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
JT25_RS01410	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
JT25_RS01410	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
JT25_RS01410	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
JT25_RS01410	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
JT25_RS01410	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
JT25_RS01410	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
JT25_RS01410	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
JT25_RS01440	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
JT25_RS01440	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
JT25_RS01520	PWY-6840	homoglutathione biosynthesis
JT25_RS01520	PWY-7255	ergothioneine biosynthesis I (bacteria)
JT25_RS01665	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JT25_RS01665	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JT25_RS01665	PWY-6896	thiamin salvage I
JT25_RS01665	PWY-6897	thiamin salvage II
JT25_RS01780	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JT25_RS01780	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JT25_RS01905	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JT25_RS01910	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JT25_RS01910	PWY-6855	chitin degradation I (archaea)
JT25_RS01910	PWY-6906	chitin derivatives degradation
JT25_RS01915	PWY-5101	L-isoleucine biosynthesis II
JT25_RS01915	PWY-5103	L-isoleucine biosynthesis III
JT25_RS01915	PWY-5104	L-isoleucine biosynthesis IV
JT25_RS01915	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JT25_RS01925	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JT25_RS01925	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
JT25_RS01925	PWY-7242	D-fructuronate degradation
JT25_RS01925	PWY-7310	D-glucosaminate degradation
JT25_RS01925	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
JT25_RS01965	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS01965	PWY-5723	Rubisco shunt
JT25_RS01975	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS01975	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JT25_RS01975	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS01975	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS01980	PWY-2301	<i>myo</i>-inositol biosynthesis
JT25_RS01980	PWY-4702	phytate degradation I
JT25_RS01980	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
JT25_RS02015	PWY-381	nitrate reduction II (assimilatory)
JT25_RS02015	PWY-5675	nitrate reduction V (assimilatory)
JT25_RS02015	PWY-6549	L-glutamine biosynthesis III
JT25_RS02015	PWY-6963	ammonia assimilation cycle I
JT25_RS02015	PWY-6964	ammonia assimilation cycle II
JT25_RS02080	PWY-1281	sulfoacetaldehyde degradation I
JT25_RS02080	PWY-5482	pyruvate fermentation to acetate II
JT25_RS02080	PWY-5485	pyruvate fermentation to acetate IV
JT25_RS02080	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS02080	PWY-6637	sulfolactate degradation II
JT25_RS02090	PWY-5482	pyruvate fermentation to acetate II
JT25_RS02090	PWY-5485	pyruvate fermentation to acetate IV
JT25_RS02090	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS02150	PWY-6700	queuosine biosynthesis
JT25_RS02155	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JT25_RS02155	PWY-622	starch biosynthesis
JT25_RS02270	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JT25_RS02270	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JT25_RS02270	PWY-6268	adenosylcobalamin salvage from cobalamin
JT25_RS02270	PWY-6269	adenosylcobalamin salvage from cobinamide II
JT25_RS02410	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS02435	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS02435	PWY-5723	Rubisco shunt
JT25_RS02785	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS02785	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS02785	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS02785	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS03040	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS03250	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
JT25_RS03365	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JT25_RS03365	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JT25_RS03460	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS03460	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS03460	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS03460	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JT25_RS03470	PWY-6936	seleno-amino acid biosynthesis
JT25_RS03470	PWY-7274	D-cycloserine biosynthesis
JT25_RS03475	PWY-6004	glycine betaine biosynthesis V (from glycine)
JT25_RS03480	PWY-2301	<i>myo</i>-inositol biosynthesis
JT25_RS03480	PWY-4702	phytate degradation I
JT25_RS03480	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
JT25_RS03540	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS03540	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JT25_RS03540	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS03540	PWY-5723	Rubisco shunt
JT25_RS03540	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS03540	PWY-6886	1-butanol autotrophic biosynthesis
JT25_RS03540	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS03540	PWY-7003	glycerol degradation to butanol
JT25_RS03540	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JT25_RS03540	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JT25_RS03590	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JT25_RS03590	PWY-5491	diethylphosphate degradation
JT25_RS03610	PWY-4621	arsenate detoxification II (glutaredoxin)
JT25_RS03640	PWY-5382	hydrogen oxidation II (aerobic, NAD)
JT25_RS03640	PWY-6758	hydrogen production II
JT25_RS03950	PWY-2941	L-lysine biosynthesis II
JT25_RS03950	PWY-2942	L-lysine biosynthesis III
JT25_RS03950	PWY-5097	L-lysine biosynthesis VI
JT25_RS03950	PWY-6559	spermidine biosynthesis II
JT25_RS03950	PWY-6562	norspermidine biosynthesis
JT25_RS03950	PWY-7153	grixazone biosynthesis
JT25_RS04030	PWY-6123	inosine-5'-phosphate biosynthesis I
JT25_RS04030	PWY-6124	inosine-5'-phosphate biosynthesis II
JT25_RS04030	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS04030	PWY-7234	inosine-5'-phosphate biosynthesis III
JT25_RS04085	PWY-5481	pyruvate fermentation to lactate
JT25_RS04085	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
JT25_RS04085	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS04090	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
JT25_RS04090	PWY-5739	GDP-D-perosamine biosynthesis
JT25_RS04090	PWY-5740	GDP-L-colitose biosynthesis
JT25_RS04090	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
JT25_RS04090	PWY-7573	GDP-mycosamine biosynthesis
JT25_RS04130	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS04130	PWY-6416	quinate degradation II
JT25_RS04130	PWY-6707	gallate biosynthesis
JT25_RS04165	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS04165	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JT25_RS04165	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS04165	PWY-5723	Rubisco shunt
JT25_RS04165	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS04165	PWY-6886	1-butanol autotrophic biosynthesis
JT25_RS04165	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS04165	PWY-7003	glycerol degradation to butanol
JT25_RS04165	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JT25_RS04165	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JT25_RS04170	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS04170	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS04170	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS04170	PWY-7003	glycerol degradation to butanol
JT25_RS04195	PWY-5316	nicotine biosynthesis
JT25_RS04195	PWY-7342	superpathway of nicotine biosynthesis
JT25_RS04275	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JT25_RS04275	PWY-622	starch biosynthesis
JT25_RS04290	PWY-5686	UMP biosynthesis
JT25_RS04395	PWY-6700	queuosine biosynthesis
JT25_RS04405	PWY-5669	phosphatidylethanolamine biosynthesis I
JT25_RS04420	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JT25_RS04420	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JT25_RS04420	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS04420	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS04420	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JT25_RS04420	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JT25_RS04420	PWY-7205	CMP phosphorylation
JT25_RS04420	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JT25_RS04420	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS04420	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS04420	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS04420	PWY-7224	purine deoxyribonucleosides salvage
JT25_RS04420	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS04420	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JT25_RS04425	PWY-2201	folate transformations I
JT25_RS04560	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS04645	PWY-2941	L-lysine biosynthesis II
JT25_RS04645	PWY-2942	L-lysine biosynthesis III
JT25_RS04645	PWY-5097	L-lysine biosynthesis VI
JT25_RS04690	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS04690	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS04690	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS04690	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS04690	PWY-7385	1,3-propanediol biosynthesis (engineered)
JT25_RS04740	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS04740	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS04740	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS04740	PWY-7003	glycerol degradation to butanol
JT25_RS04745	PWY-6749	CMP-legionaminate biosynthesis I
JT25_RS04770	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS04770	PWY-5686	UMP biosynthesis
JT25_RS04770	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS04775	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS04775	PWY-5686	UMP biosynthesis
JT25_RS04775	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS04845	PWY-5964	guanylyl molybdenum cofactor biosynthesis
JT25_RS04845	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
JT25_RS04875	PWY-3781	aerobic respiration I (cytochrome c)
JT25_RS04875	PWY-4521	arsenite oxidation I (respiratory)
JT25_RS04875	PWY-6692	Fe(II) oxidation
JT25_RS04875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JT25_RS04965	PWY-5030	L-histidine degradation III
JT25_RS04965	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS05055	PWY-5340	sulfate activation for sulfonation
JT25_RS05070	PWY-6123	inosine-5'-phosphate biosynthesis I
JT25_RS05070	PWY-6124	inosine-5'-phosphate biosynthesis II
JT25_RS05070	PWY-7234	inosine-5'-phosphate biosynthesis III
JT25_RS05075	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JT25_RS05075	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JT25_RS05075	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JT25_RS05175	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
JT25_RS05310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS05310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS05325	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JT25_RS05325	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JT25_RS05330	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JT25_RS05330	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JT25_RS05730	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JT25_RS05730	PWY-622	starch biosynthesis
JT25_RS05760	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS05760	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS05760	PWY-6886	1-butanol autotrophic biosynthesis
JT25_RS05760	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS05760	PWY-7003	glycerol degradation to butanol
JT25_RS05885	PWY-5839	menaquinol-7 biosynthesis
JT25_RS05885	PWY-5844	menaquinol-9 biosynthesis
JT25_RS05885	PWY-5849	menaquinol-6 biosynthesis
JT25_RS05885	PWY-5890	menaquinol-10 biosynthesis
JT25_RS05885	PWY-5891	menaquinol-11 biosynthesis
JT25_RS05885	PWY-5892	menaquinol-12 biosynthesis
JT25_RS05885	PWY-5895	menaquinol-13 biosynthesis
JT25_RS06010	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS06185	PWY-5057	L-valine degradation II
JT25_RS06185	PWY-5076	L-leucine degradation III
JT25_RS06185	PWY-5078	L-isoleucine degradation II
JT25_RS06185	PWY-5101	L-isoleucine biosynthesis II
JT25_RS06185	PWY-5103	L-isoleucine biosynthesis III
JT25_RS06185	PWY-5104	L-isoleucine biosynthesis IV
JT25_RS06185	PWY-5108	L-isoleucine biosynthesis V
JT25_RS06215	PWY-5692	allantoin degradation to glyoxylate II
JT25_RS06215	PWY-5698	allantoin degradation to ureidoglycolate II (ammonia producing)
JT25_RS06375	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JT25_RS06420	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS06420	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS06420	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS06420	PWY-7385	1,3-propanediol biosynthesis (engineered)
JT25_RS06520	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JT25_RS06710	PWY-7039	phosphatidate metabolism, as a signaling molecule
JT25_RS06805	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS06805	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JT25_RS06805	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS06805	PWY-5723	Rubisco shunt
JT25_RS06805	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS06805	PWY-6886	1-butanol autotrophic biosynthesis
JT25_RS06805	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS06805	PWY-7003	glycerol degradation to butanol
JT25_RS06805	PWY-7124	ethylene biosynthesis V (engineered)
JT25_RS06805	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JT25_RS06845	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JT25_RS06945	PWY-43	putrescine biosynthesis II
JT25_RS07105	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS07120	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JT25_RS07120	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JT25_RS07155	PWY-6123	inosine-5'-phosphate biosynthesis I
JT25_RS07155	PWY-6124	inosine-5'-phosphate biosynthesis II
JT25_RS07155	PWY-7234	inosine-5'-phosphate biosynthesis III
JT25_RS07230	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
JT25_RS07230	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
JT25_RS07260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS07260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS07295	PWY-3781	aerobic respiration I (cytochrome c)
JT25_RS07295	PWY-6692	Fe(II) oxidation
JT25_RS07295	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
JT25_RS07295	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JT25_RS07395	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS07400	PWY-6502	oxidized GTP and dGTP detoxification
JT25_RS07400	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JT25_RS07400	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JT25_RS07400	PWY-6897	thiamin salvage II
JT25_RS07400	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
JT25_RS07400	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
JT25_RS07400	PWY-7356	thiamin salvage IV (yeast)
JT25_RS07400	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JT25_RS07435	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
JT25_RS07465	PWY-3341	L-proline biosynthesis III
JT25_RS07465	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JT25_RS07710	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS07710	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS07745	PWY-6825	phosphatidylcholine biosynthesis V
JT25_RS07800	PWY-6825	phosphatidylcholine biosynthesis V
JT25_RS07810	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS07810	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JT25_RS07815	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS07815	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JT25_RS07840	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
JT25_RS07840	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
JT25_RS07840	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
JT25_RS07840	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
JT25_RS07840	PWY-6978	plastoquinol-9 biosynthesis II
JT25_RS07970	PWY-3801	sucrose degradation II (sucrose synthase)
JT25_RS07970	PWY-5054	sorbitol biosynthesis I
JT25_RS07970	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
JT25_RS07970	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JT25_RS07970	PWY-5659	GDP-mannose biosynthesis
JT25_RS07970	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS07970	PWY-621	sucrose degradation III (sucrose invertase)
JT25_RS07970	PWY-622	starch biosynthesis
JT25_RS07970	PWY-6981	chitin biosynthesis
JT25_RS07970	PWY-6992	1,5-anhydrofructose degradation
JT25_RS07970	PWY-7238	sucrose biosynthesis II
JT25_RS07970	PWY-7347	sucrose biosynthesis III
JT25_RS07970	PWY-7385	1,3-propanediol biosynthesis (engineered)
JT25_RS08065	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JT25_RS08065	PWY-622	starch biosynthesis
JT25_RS08145	PWY-6655	xanthan biosynthesis
JT25_RS08145	PWY-6658	acetan biosynthesis
JT25_RS08150	PWY-5686	UMP biosynthesis
JT25_RS08160	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS08165	PWY-6164	3-dehydroquinate biosynthesis I
JT25_RS08175	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
JT25_RS08175	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JT25_RS08195	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS08195	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS08195	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS08230	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
JT25_RS08240	PWY-3162	L-tryptophan degradation V (side chain pathway)
JT25_RS08240	PWY-5057	L-valine degradation II
JT25_RS08240	PWY-5076	L-leucine degradation III
JT25_RS08240	PWY-5078	L-isoleucine degradation II
JT25_RS08240	PWY-5079	L-phenylalanine degradation III
JT25_RS08240	PWY-5082	L-methionine degradation III
JT25_RS08240	PWY-5480	pyruvate fermentation to ethanol I
JT25_RS08240	PWY-5486	pyruvate fermentation to ethanol II
JT25_RS08240	PWY-5751	phenylethanol biosynthesis
JT25_RS08240	PWY-6313	serotonin degradation
JT25_RS08240	PWY-6333	acetaldehyde biosynthesis I
JT25_RS08240	PWY-6342	noradrenaline and adrenaline degradation
JT25_RS08240	PWY-6587	pyruvate fermentation to ethanol III
JT25_RS08240	PWY-6802	salidroside biosynthesis
JT25_RS08240	PWY-6871	3-methylbutanol biosynthesis
JT25_RS08240	PWY-7013	L-1,2-propanediol degradation
JT25_RS08240	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JT25_RS08240	PWY-7118	chitin degradation to ethanol
JT25_RS08240	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JT25_RS08300	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS08300	PWY-6549	L-glutamine biosynthesis III
JT25_RS08300	PWY-6728	methylaspartate cycle
JT25_RS08300	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS08300	PWY-7124	ethylene biosynthesis V (engineered)
JT25_RS08300	PWY-7254	TCA cycle VII (acetate-producers)
JT25_RS08300	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JT25_RS08345	PWY-6703	preQ<sub>0</sub> biosynthesis
JT25_RS08475	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS08495	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS08615	PWY-5316	nicotine biosynthesis
JT25_RS08615	PWY-5381	pyridine nucleotide cycling (plants)
JT25_RS08615	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JT25_RS08615	PWY-7342	superpathway of nicotine biosynthesis
JT25_RS08630	PWY-5686	UMP biosynthesis
JT25_RS08720	PWY-3841	folate transformations II
JT25_RS08720	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS08720	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS08720	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JT25_RS08720	PWY-7199	pyrimidine deoxyribonucleosides salvage
JT25_RS08720	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JT25_RS08845	PWY-6834	spermidine biosynthesis III
JT25_RS08960	PWY-5194	siroheme biosynthesis
JT25_RS08960	PWY-5441	S-methyl-L-methionine cycle
JT25_RS08960	PWY-702	L-methionine biosynthesis II
JT25_RS08960	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS08965	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS08975	PWY-2201	folate transformations I
JT25_RS08975	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS08980	PWY-2201	folate transformations I
JT25_RS08980	PWY-3841	folate transformations II
JT25_RS08980	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS08990	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS09045	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS09150	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS09150	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS09150	PWY-7560	methylerythritol phosphate pathway II
JT25_RS09160	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
JT25_RS09160	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JT25_RS09225	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JT25_RS09225	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JT25_RS09225	PWY-6269	adenosylcobalamin salvage from cobinamide II
JT25_RS09230	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JT25_RS09230	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JT25_RS09230	PWY-6269	adenosylcobalamin salvage from cobinamide II
JT25_RS09240	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JT25_RS09240	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JT25_RS09240	PWY-6269	adenosylcobalamin salvage from cobinamide II
JT25_RS09245	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
JT25_RS09245	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JT25_RS09315	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS09315	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS09320	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
JT25_RS09320	PWY-6164	3-dehydroquinate biosynthesis I
JT25_RS09320	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
JT25_RS09335	PWY-5443	aminopropanol phosphate biosynthesis I
JT25_RS09360	PWY-5155	&beta;-alanine biosynthesis III
JT25_RS09370	PWY-6654	phosphopantothenate biosynthesis III
JT25_RS09375	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JT25_RS09375	PWY-6148	tetrahydromethanopterin biosynthesis
JT25_RS09375	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JT25_RS09375	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JT25_RS09675	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JT25_RS09675	PWY-6596	adenosine nucleotides degradation I
JT25_RS09675	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS09685	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS09720	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
JT25_RS09735	PWY-40	putrescine biosynthesis I
JT25_RS09735	PWY-43	putrescine biosynthesis II
JT25_RS09735	PWY-6305	putrescine biosynthesis IV
JT25_RS09735	PWY-6834	spermidine biosynthesis III
JT25_RS09835	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
JT25_RS09835	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS09835	PWY-6416	quinate degradation II
JT25_RS09835	PWY-6707	gallate biosynthesis
JT25_RS09840	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
JT25_RS09840	PWY-5389	3-methylthiopropanoate biosynthesis
JT25_RS09885	PWY-5958	acridone alkaloid biosynthesis
JT25_RS09885	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JT25_RS09885	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JT25_RS09890	PWY-5958	acridone alkaloid biosynthesis
JT25_RS09890	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JT25_RS09890	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JT25_RS09975	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JT25_RS10000	PWY-3841	folate transformations II
JT25_RS10000	PWY-6614	tetrahydrofolate biosynthesis
JT25_RS10095	PWY-6654	phosphopantothenate biosynthesis III
JT25_RS10155	PWY-2201	folate transformations I
JT25_RS10155	PWY-3841	folate transformations II
JT25_RS10195	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
JT25_RS10260	PWY-6854	ethylene biosynthesis III (microbes)
JT25_RS10290	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JT25_RS10290	PWY-6167	flavin biosynthesis II (archaea)
JT25_RS10290	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS10305	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JT25_RS10405	PWY-6610	adenine and adenosine salvage IV
JT25_RS10410	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS10410	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS10410	PWY-7560	methylerythritol phosphate pathway II
JT25_RS10420	PWY-622	starch biosynthesis
JT25_RS10430	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
JT25_RS10445	PWY-2201	folate transformations I
JT25_RS10715	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS10725	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS10800	PWY-4202	arsenate detoxification I (glutaredoxin)
JT25_RS10800	PWY-4621	arsenate detoxification II (glutaredoxin)
JT25_RS10805	PWY-7731	JT25_RS10805
JT25_RS10970	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS10970	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JT25_RS11025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS11035	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS11045	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JT25_RS11045	PWY-5667	CDP-diacylglycerol biosynthesis I
JT25_RS11045	PWY-6453	stigma estolide biosynthesis
JT25_RS11045	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
JT25_RS11045	PWY-7587	oleate biosynthesis III (cyanobacteria)
JT25_RS11050	PWY-6749	CMP-legionaminate biosynthesis I
JT25_RS11405	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JT25_RS11405	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JT25_RS11425	PWY-6825	phosphatidylcholine biosynthesis V
JT25_RS11525	PWY-5381	pyridine nucleotide cycling (plants)
JT25_RS11530	PWY-5381	pyridine nucleotide cycling (plants)
JT25_RS11530	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JT25_RS11645	PWY-5686	UMP biosynthesis
JT25_RS11650	PWY-5686	UMP biosynthesis
JT25_RS11735	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS11755	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS11795	PWY-6825	phosphatidylcholine biosynthesis V
JT25_RS11840	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS11840	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS11840	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS11840	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS11865	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
JT25_RS11935	PWY-5392	reductive TCA cycle II
JT25_RS11935	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JT25_RS11935	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS11935	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS11935	PWY-6728	methylaspartate cycle
JT25_RS11935	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS11935	PWY-7254	TCA cycle VII (acetate-producers)
JT25_RS11935	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS12010	PWY-2201	folate transformations I
JT25_RS12010	PWY-3841	folate transformations II
JT25_RS12065	PWY-6749	CMP-legionaminate biosynthesis I
JT25_RS12215	PWY-2201	folate transformations I
JT25_RS12215	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS12235	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS12235	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS12240	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS12240	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS12245	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS12245	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS12250	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS12250	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JT25_RS12250	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS12250	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS12260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS12260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS12265	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS12265	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS12265	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS12270	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JT25_RS12270	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JT25_RS12290	PWY-2201	folate transformations I
JT25_RS12300	PWY-5667	CDP-diacylglycerol biosynthesis I
JT25_RS12300	PWY-5981	CDP-diacylglycerol biosynthesis III
JT25_RS12335	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS12380	PWY-2941	L-lysine biosynthesis II
JT25_RS12380	PWY-2942	L-lysine biosynthesis III
JT25_RS12380	PWY-5097	L-lysine biosynthesis VI
JT25_RS12385	PWY-2941	L-lysine biosynthesis II
JT25_RS12385	PWY-5097	L-lysine biosynthesis VI
JT25_RS12630	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS12640	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS12640	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JT25_RS12675	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS12675	PWY-5686	UMP biosynthesis
JT25_RS12685	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS12685	PWY-5723	Rubisco shunt
JT25_RS12685	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS12685	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS12685	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS12685	PWY-7560	methylerythritol phosphate pathway II
JT25_RS12695	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS12695	PWY-5723	Rubisco shunt
JT25_RS12700	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS12700	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS12700	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS12700	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS12700	PWY-7385	1,3-propanediol biosynthesis (engineered)
JT25_RS12845	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS12860	PWY-6420	pyrroloquinoline quinone biosynthesis
JT25_RS12905	PWY-5686	UMP biosynthesis
JT25_RS12930	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS12930	PWY-5686	UMP biosynthesis
JT25_RS12935	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS12935	PWY-5723	Rubisco shunt
JT25_RS12935	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS12935	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS12935	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS12935	PWY-7560	methylerythritol phosphate pathway II
JT25_RS12970	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JT25_RS12970	PWY-6148	tetrahydromethanopterin biosynthesis
JT25_RS12970	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JT25_RS12970	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JT25_RS12975	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JT25_RS12975	PWY-6148	tetrahydromethanopterin biosynthesis
JT25_RS12975	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JT25_RS12975	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JT25_RS12985	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
JT25_RS12985	PWY-5368	dimorphecolate biosynthesis
JT25_RS12985	PWY-5995	linoleate biosynthesis I (plants)
JT25_RS12985	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
JT25_RS12985	PWY-6803	phosphatidylcholine acyl editing
JT25_RS12985	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
JT25_RS12985	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
JT25_RS12985	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
JT25_RS12985	PWY-7470	phosphatidylcholine biosynthesis VII
JT25_RS12985	PWY-7618	ricinoleate biosynthesis
JT25_RS13015	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JT25_RS13015	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
JT25_RS13020	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JT25_RS13030	PWY-2201	folate transformations I
JT25_RS13045	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS13085	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS13155	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
JT25_RS13155	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JT25_RS13205	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
JT25_RS13205	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS13250	PWY-2722	trehalose degradation IV
JT25_RS13250	PWY-2723	trehalose degradation V
JT25_RS13250	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JT25_RS13250	PWY-5661	GDP-glucose biosynthesis
JT25_RS13250	PWY-621	sucrose degradation III (sucrose invertase)
JT25_RS13250	PWY-7238	sucrose biosynthesis II
JT25_RS13250	PWY-7385	1,3-propanediol biosynthesis (engineered)
JT25_RS13260	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS13410	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JT25_RS13410	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS13410	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS13410	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
JT25_RS13415	PWY-6749	CMP-legionaminate biosynthesis I
JT25_RS13420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS13420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS13435	PWY-3341	L-proline biosynthesis III
JT25_RS13435	PWY-4981	L-proline biosynthesis II (from arginine)
JT25_RS13435	PWY-6344	L-ornithine degradation II (Stickland reaction)
JT25_RS13490	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
JT25_RS13505	PWY-5209	methyl-coenzyme M oxidation to CO<sub>2</sub>
JT25_RS13510	PWY-7158	L-phenylalanine degradation V
JT25_RS13585	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS13585	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS13585	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS13585	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JT25_RS13605	PWY-3081	L-lysine biosynthesis V
JT25_RS13605	PWY-6871	3-methylbutanol biosynthesis
JT25_RS13605	PWY-7710	JT25_RS13605
JT25_RS13610	PWY-6936	seleno-amino acid biosynthesis
JT25_RS13610	PWY-7274	D-cycloserine biosynthesis
JT25_RS13740	PWY-6749	CMP-legionaminate biosynthesis I
JT25_RS13750	PWY-5278	sulfite oxidation III
JT25_RS13750	PWY-5340	sulfate activation for sulfonation
JT25_RS13750	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS13750	PWY-6932	selenate reduction
JT25_RS13765	PWY-5278	sulfite oxidation III
JT25_RS13765	PWY-5340	sulfate activation for sulfonation
JT25_RS13765	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS13765	PWY-6932	selenate reduction
JT25_RS13825	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JT25_RS13850	PWY-5482	pyruvate fermentation to acetate II
JT25_RS13850	PWY-5485	pyruvate fermentation to acetate IV
JT25_RS13850	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS14040	PWY-2941	L-lysine biosynthesis II
JT25_RS14040	PWY-2942	L-lysine biosynthesis III
JT25_RS14040	PWY-5097	L-lysine biosynthesis VI
JT25_RS14040	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS14040	PWY-6559	spermidine biosynthesis II
JT25_RS14040	PWY-6562	norspermidine biosynthesis
JT25_RS14040	PWY-7153	grixazone biosynthesis
JT25_RS14040	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS14045	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JT25_RS14060	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS14070	PWY-7294	xylose degradation IV
JT25_RS14070	PWY-7295	L-arabinose degradation IV
JT25_RS14250	PWY-6703	preQ<sub>0</sub> biosynthesis
JT25_RS14255	PWY-6703	preQ<sub>0</sub> biosynthesis
JT25_RS14305	PWY-622	starch biosynthesis
JT25_RS14310	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JT25_RS14310	PWY-622	starch biosynthesis
JT25_RS14315	PWY-622	starch biosynthesis
JT25_RS14325	PWY-5941	glycogen degradation II (eukaryotic)
JT25_RS14325	PWY-6724	starch degradation II
JT25_RS14325	PWY-6737	starch degradation V
JT25_RS14325	PWY-7238	sucrose biosynthesis II
JT25_RS14395	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS14395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS14395	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS14395	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS14540	PWY-5392	reductive TCA cycle II
JT25_RS14540	PWY-5537	pyruvate fermentation to acetate V
JT25_RS14540	PWY-5538	pyruvate fermentation to acetate VI
JT25_RS14540	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS14540	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS14540	PWY-6728	methylaspartate cycle
JT25_RS14540	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS14540	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS14545	PWY-5392	reductive TCA cycle II
JT25_RS14545	PWY-5537	pyruvate fermentation to acetate V
JT25_RS14545	PWY-5538	pyruvate fermentation to acetate VI
JT25_RS14545	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS14545	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS14545	PWY-6728	methylaspartate cycle
JT25_RS14545	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS14545	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS14600	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS14615	PWY-7560	methylerythritol phosphate pathway II
JT25_RS14635	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
JT25_RS14865	PWY-5381	pyridine nucleotide cycling (plants)
JT25_RS14865	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JT25_RS14865	PWY-6596	adenosine nucleotides degradation I
JT25_RS14865	PWY-6606	guanosine nucleotides degradation II
JT25_RS14865	PWY-6607	guanosine nucleotides degradation I
JT25_RS14865	PWY-6608	guanosine nucleotides degradation III
JT25_RS14865	PWY-7185	UTP and CTP dephosphorylation I
JT25_RS14965	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
JT25_RS14985	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
JT25_RS14985	PWY-6749	CMP-legionaminate biosynthesis I
JT25_RS14985	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
JT25_RS14985	PWY-7102	bisabolene biosynthesis
JT25_RS14985	PWY-7131	CMP-legionaminate biosynthesis II
JT25_RS14985	PWY-7721	JT25_RS14985
JT25_RS14985	PWY-7736	JT25_RS14985
JT25_RS15055	PWY-6829	tRNA methylation (yeast)
JT25_RS15055	PWY-7285	methylwyosine biosynthesis
JT25_RS15055	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
JT25_RS15205	PWY-6655	xanthan biosynthesis
JT25_RS15205	PWY-6658	acetan biosynthesis
JT25_RS15395	PWY-6543	4-aminobenzoate biosynthesis
JT25_RS15405	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JT25_RS15405	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JT25_RS15405	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JT25_RS15405	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JT25_RS15405	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JT25_RS15405	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JT25_RS15425	PWY-6825	phosphatidylcholine biosynthesis V
JT25_RS15435	PWY-5386	methylglyoxal degradation I
JT25_RS15440	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS15440	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS15440	PWY-7560	methylerythritol phosphate pathway II
JT25_RS15465	PWY-6098	diploterol and cycloartenol biosynthesis
JT25_RS15465	PWY-7072	hopanoid biosynthesis (bacteria)
JT25_RS15490	PWY-6605	adenine and adenosine salvage II
JT25_RS15490	PWY-6610	adenine and adenosine salvage IV
JT25_RS15495	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS15495	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS15495	PWY-7560	methylerythritol phosphate pathway II
JT25_RS15530	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
JT25_RS15530	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS15535	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JT25_RS15535	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JT25_RS15555	PWY-6840	homoglutathione biosynthesis
JT25_RS15555	PWY-7255	ergothioneine biosynthesis I (bacteria)
JT25_RS15620	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS15620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS15620	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS15620	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS15630	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS15630	PWY-5723	Rubisco shunt
JT25_RS15650	PWY-3341	L-proline biosynthesis III
JT25_RS15650	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JT25_RS15755	PWY-3341	L-proline biosynthesis III
JT25_RS15755	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JT25_RS15760	PWY-5381	pyridine nucleotide cycling (plants)
JT25_RS15760	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JT25_RS15865	PWY-4381	fatty acid biosynthesis initiation I
JT25_RS15865	PWY-5743	3-hydroxypropanoate cycle
JT25_RS15865	PWY-5744	glyoxylate assimilation
JT25_RS15865	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JT25_RS15865	PWY-6679	jadomycin biosynthesis
JT25_RS15865	PWY-6722	candicidin biosynthesis
JT25_RS15865	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS15890	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JT25_RS15890	PWY-7177	UTP and CTP dephosphorylation II
JT25_RS15890	PWY-7185	UTP and CTP dephosphorylation I
JT25_RS15895	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
JT25_RS15895	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
JT25_RS15900	PWY-1042	glycolysis IV (plant cytosol)
JT25_RS15900	PWY-1622	formaldehyde assimilation I (serine pathway)
JT25_RS15900	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JT25_RS15900	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS15900	PWY-5723	Rubisco shunt
JT25_RS15900	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS15900	PWY-6886	1-butanol autotrophic biosynthesis
JT25_RS15900	PWY-6901	superpathway of glucose and xylose degradation
JT25_RS15900	PWY-7003	glycerol degradation to butanol
JT25_RS15900	PWY-7124	ethylene biosynthesis V (engineered)
JT25_RS15900	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JT25_RS15910	PWY-7560	methylerythritol phosphate pathway II
JT25_RS15915	PWY-7560	methylerythritol phosphate pathway II
JT25_RS15960	PWY-1881	formate oxidation to CO<sub>2</sub>
JT25_RS15960	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS15960	PWY-6696	oxalate degradation III
JT25_RS16015	PWY-5381	pyridine nucleotide cycling (plants)
JT25_RS16015	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JT25_RS16015	PWY-6596	adenosine nucleotides degradation I
JT25_RS16015	PWY-6606	guanosine nucleotides degradation II
JT25_RS16015	PWY-6607	guanosine nucleotides degradation I
JT25_RS16015	PWY-6608	guanosine nucleotides degradation III
JT25_RS16015	PWY-7185	UTP and CTP dephosphorylation I
JT25_RS16030	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JT25_RS16030	PWY-5491	diethylphosphate degradation
JT25_RS16055	PWY-6871	3-methylbutanol biosynthesis
JT25_RS16065	PWY-5669	phosphatidylethanolamine biosynthesis I
JT25_RS16075	PWY-5103	L-isoleucine biosynthesis III
JT25_RS16075	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JT25_RS16080	PWY-5101	L-isoleucine biosynthesis II
JT25_RS16080	PWY-5103	L-isoleucine biosynthesis III
JT25_RS16080	PWY-5104	L-isoleucine biosynthesis IV
JT25_RS16080	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
JT25_RS16080	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
JT25_RS16080	PWY-6389	(<i>S</i>)-acetoin biosynthesis
JT25_RS16080	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JT25_RS16085	PWY-5101	L-isoleucine biosynthesis II
JT25_RS16085	PWY-5103	L-isoleucine biosynthesis III
JT25_RS16085	PWY-5104	L-isoleucine biosynthesis IV
JT25_RS16085	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
JT25_RS16085	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
JT25_RS16085	PWY-6389	(<i>S</i>)-acetoin biosynthesis
JT25_RS16085	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JT25_RS16090	PWY-6012	acyl carrier protein metabolism I
JT25_RS16090	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JT25_RS16145	PWY-6825	phosphatidylcholine biosynthesis V
JT25_RS16235	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JT25_RS16235	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JT25_RS16235	PWY-5989	stearate biosynthesis II (bacteria and plants)
JT25_RS16235	PWY-6113	superpathway of mycolate biosynthesis
JT25_RS16235	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JT25_RS16235	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS16235	PWY-7663	gondoate biosynthesis (anaerobic)
JT25_RS16235	PWY-7664	oleate biosynthesis IV (anaerobic)
JT25_RS16235	PWYG-321	mycolate biosynthesis
JT25_RS16345	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS16345	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS16345	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS16345	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS16380	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JT25_RS16380	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JT25_RS16380	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JT25_RS16435	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
JT25_RS16435	PWY-6853	ethylene biosynthesis II (microbes)
JT25_RS16435	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JT25_RS16560	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS16560	PWY-6416	quinate degradation II
JT25_RS16560	PWY-6707	gallate biosynthesis
JT25_RS16705	PWY-6936	seleno-amino acid biosynthesis
JT25_RS16760	PWY-5704	urea degradation II
JT25_RS16765	PWY-5704	urea degradation II
JT25_RS16770	PWY-5704	urea degradation II
JT25_RS16870	PWY-5367	petroselinate biosynthesis
JT25_RS16870	PWY-5515	L-arabinose degradation II
JT25_RS16870	PWY-5525	D-glucuronate degradation I
JT25_RS16870	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JT25_RS16870	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JT25_RS16870	PWY-5989	stearate biosynthesis II (bacteria and plants)
JT25_RS16870	PWY-5994	palmitate biosynthesis I (animals and fungi)
JT25_RS16870	PWY-6113	superpathway of mycolate biosynthesis
JT25_RS16870	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JT25_RS16870	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS16870	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS16870	PWY-7663	gondoate biosynthesis (anaerobic)
JT25_RS16870	PWY-7664	oleate biosynthesis IV (anaerobic)
JT25_RS16870	PWYG-321	mycolate biosynthesis
JT25_RS16875	PWY-4381	fatty acid biosynthesis initiation I
JT25_RS16875	PWY-6799	fatty acid biosynthesis (plant mitochondria)
JT25_RS16875	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS16880	PWY-4381	fatty acid biosynthesis initiation I
JT25_RS16925	PWY-5663	tetrahydrobiopterin biosynthesis I
JT25_RS16925	PWY-5664	tetrahydrobiopterin biosynthesis II
JT25_RS16925	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JT25_RS16925	PWY-6703	preQ<sub>0</sub> biosynthesis
JT25_RS16925	PWY-6983	tetrahydrobiopterin biosynthesis III
JT25_RS16925	PWY-7442	drosopterin and aurodrosopterin biosynthesis
JT25_RS16965	PWY-1001	cellulose biosynthesis
JT25_RS16965	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS16965	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JT25_RS16965	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS16965	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS16995	PWY-6700	queuosine biosynthesis
JT25_RS17015	PWY-6938	NADH repair
JT25_RS17035	PWY-2781	<i>cis</i>-zeatin biosynthesis
JT25_RS17045	PWY-6562	norspermidine biosynthesis
JT25_RS17105	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS17110	PWY-5350	thiosulfate disproportionation III (rhodanese)
JT25_RS17120	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS17120	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS17165	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS17215	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS17225	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
JT25_RS17230	PWY-4983	L-citrulline-nitric oxide cycle
JT25_RS17230	PWY-4984	urea cycle
JT25_RS17230	PWY-5	canavanine biosynthesis
JT25_RS17230	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS17230	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS17245	PWY-5194	siroheme biosynthesis
JT25_RS17245	PWY-5441	S-methyl-L-methionine cycle
JT25_RS17245	PWY-702	L-methionine biosynthesis II
JT25_RS17245	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS17275	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS17290	PWY-5101	L-isoleucine biosynthesis II
JT25_RS17290	PWY-5103	L-isoleucine biosynthesis III
JT25_RS17290	PWY-5104	L-isoleucine biosynthesis IV
JT25_RS17290	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JT25_RS17300	PWY-4981	L-proline biosynthesis II (from arginine)
JT25_RS17300	PWY-4984	urea cycle
JT25_RS17300	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS17400	PWY-5269	cardiolipin biosynthesis II
JT25_RS17400	PWY-5668	cardiolipin biosynthesis I
JT25_RS17465	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS17465	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS17465	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS17465	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JT25_RS17510	PWY-6614	tetrahydrofolate biosynthesis
JT25_RS17530	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JT25_RS17530	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JT25_RS17530	PWY-6897	thiamin salvage II
JT25_RS17530	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
JT25_RS17530	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
JT25_RS17530	PWY-7356	thiamin salvage IV (yeast)
JT25_RS17530	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JT25_RS17555	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS17555	PWY-6549	L-glutamine biosynthesis III
JT25_RS17555	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS17555	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS17585	PWY-3781	aerobic respiration I (cytochrome c)
JT25_RS17585	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JT25_RS17585	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JT25_RS17585	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS17585	PWY-6728	methylaspartate cycle
JT25_RS17585	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS17585	PWY-7254	TCA cycle VII (acetate-producers)
JT25_RS17585	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JT25_RS17590	PWY-3781	aerobic respiration I (cytochrome c)
JT25_RS17590	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JT25_RS17590	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JT25_RS17590	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS17590	PWY-6728	methylaspartate cycle
JT25_RS17590	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS17590	PWY-7254	TCA cycle VII (acetate-producers)
JT25_RS17590	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JT25_RS17600	PWY-6700	queuosine biosynthesis
JT25_RS17720	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
JT25_RS17720	PWY-5368	dimorphecolate biosynthesis
JT25_RS17720	PWY-5995	linoleate biosynthesis I (plants)
JT25_RS17720	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
JT25_RS17720	PWY-6803	phosphatidylcholine acyl editing
JT25_RS17720	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
JT25_RS17720	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
JT25_RS17720	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
JT25_RS17720	PWY-7470	phosphatidylcholine biosynthesis VII
JT25_RS17720	PWY-7618	ricinoleate biosynthesis
JT25_RS17785	PWY-3041	monoterpene biosynthesis
JT25_RS17785	PWY-5423	oleoresin monoterpene volatiles biosynthesis
JT25_RS17785	PWY-7410	ipsdienol biosynthesis
JT25_RS18040	PWY-1622	formaldehyde assimilation I (serine pathway)
JT25_RS18040	PWY-181	photorespiration
JT25_RS18040	PWY-2161	folate polyglutamylation
JT25_RS18040	PWY-2201	folate transformations I
JT25_RS18040	PWY-3661	glycine betaine degradation I
JT25_RS18040	PWY-3661-1	glycine betaine degradation II (mammalian)
JT25_RS18040	PWY-3841	folate transformations II
JT25_RS18040	PWY-5497	purine nucleobases degradation II (anaerobic)
JT25_RS18055	PWY-1622	formaldehyde assimilation I (serine pathway)
JT25_RS18055	PWY-5392	reductive TCA cycle II
JT25_RS18055	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JT25_RS18055	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS18055	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS18055	PWY-6728	methylaspartate cycle
JT25_RS18055	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS18055	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS18055	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JT25_RS18135	PWY-5659	GDP-mannose biosynthesis
JT25_RS18135	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
JT25_RS18380	PWY-2201	folate transformations I
JT25_RS18635	PWY-1622	formaldehyde assimilation I (serine pathway)
JT25_RS18635	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS18635	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS18635	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS18635	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
JT25_RS18635	PWY-6549	L-glutamine biosynthesis III
JT25_RS18635	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS18635	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS18635	PWY-7124	ethylene biosynthesis V (engineered)
JT25_RS18725	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
JT25_RS18725	PWY-2161	folate polyglutamylation
JT25_RS18725	PWY-2201	folate transformations I
JT25_RS18725	PWY-3841	folate transformations II
JT25_RS18730	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS18730	PWY-5723	Rubisco shunt
JT25_RS18745	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JT25_RS18920	PWY-6871	3-methylbutanol biosynthesis
JT25_RS18960	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JT25_RS19020	PWY-4081	glutathione redox reactions I
JT25_RS19085	PWY-6098	diploterol and cycloartenol biosynthesis
JT25_RS19085	PWY-7072	hopanoid biosynthesis (bacteria)
JT25_RS19250	PWY-5392	reductive TCA cycle II
JT25_RS19250	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JT25_RS19250	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS19250	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS19250	PWY-6728	methylaspartate cycle
JT25_RS19250	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS19250	PWY-7254	TCA cycle VII (acetate-producers)
JT25_RS19250	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS19335	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
JT25_RS19345	PWY-5796	malonate decarboxylase activation
JT25_RS19350	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
JT25_RS19350	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS19360	PWY-5254	methanofuran biosynthesis
JT25_RS19370	PWY-5958	acridone alkaloid biosynthesis
JT25_RS19370	PWY-6543	4-aminobenzoate biosynthesis
JT25_RS19370	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JT25_RS19370	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JT25_RS19420	PWY-3781	aerobic respiration I (cytochrome c)
JT25_RS19420	PWY-4521	arsenite oxidation I (respiratory)
JT25_RS19420	PWY-6692	Fe(II) oxidation
JT25_RS19420	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JT25_RS19445	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JT25_RS19450	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JT25_RS19485	PWY-5316	nicotine biosynthesis
JT25_RS19485	PWY-7342	superpathway of nicotine biosynthesis
JT25_RS19510	PWY-6936	seleno-amino acid biosynthesis
JT25_RS19570	PWY-6148	tetrahydromethanopterin biosynthesis
JT25_RS19600	PWY-6902	chitin degradation II
JT25_RS19700	PWY-6339	syringate degradation
JT25_RS19710	PWY-6339	syringate degradation
JT25_RS19720	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JT25_RS19720	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
JT25_RS19720	PWY-7622	UDP-galactofuranose biosynthesis
JT25_RS19945	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS19995	PWY-5667	CDP-diacylglycerol biosynthesis I
JT25_RS19995	PWY-5981	CDP-diacylglycerol biosynthesis III
JT25_RS20000	PWY-7294	xylose degradation IV
JT25_RS20000	PWY-7295	L-arabinose degradation IV
JT25_RS20000	PWY-7560	methylerythritol phosphate pathway II
JT25_RS20075	PWY-6871	3-methylbutanol biosynthesis
JT25_RS20110	PWY-6167	flavin biosynthesis II (archaea)
JT25_RS20110	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS20155	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS20185	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
JT25_RS20195	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JT25_RS20205	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JT25_RS20205	PWY-7177	UTP and CTP dephosphorylation II
JT25_RS20205	PWY-7185	UTP and CTP dephosphorylation I
JT25_RS20250	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
JT25_RS20425	PWY-5747	2-methylcitrate cycle II
JT25_RS20435	PWY-3821	galactose degradation III
JT25_RS20435	PWY-6317	galactose degradation I (Leloir pathway)
JT25_RS20435	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JT25_RS20435	PWY-6527	stachyose degradation
JT25_RS20435	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
JT25_RS20435	PWY-7344	UDP-D-galactose biosynthesis
JT25_RS20450	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JT25_RS20450	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JT25_RS20450	PWY-5989	stearate biosynthesis II (bacteria and plants)
JT25_RS20450	PWY-5994	palmitate biosynthesis I (animals and fungi)
JT25_RS20450	PWY-6113	superpathway of mycolate biosynthesis
JT25_RS20450	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JT25_RS20450	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS20450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS20450	PWY-7663	gondoate biosynthesis (anaerobic)
JT25_RS20450	PWY-7664	oleate biosynthesis IV (anaerobic)
JT25_RS20450	PWYG-321	mycolate biosynthesis
JT25_RS20630	PWY-6854	ethylene biosynthesis III (microbes)
JT25_RS20720	PWY-4381	fatty acid biosynthesis initiation I
JT25_RS20720	PWY-5743	3-hydroxypropanoate cycle
JT25_RS20720	PWY-5744	glyoxylate assimilation
JT25_RS20720	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JT25_RS20720	PWY-6679	jadomycin biosynthesis
JT25_RS20720	PWY-6722	candicidin biosynthesis
JT25_RS20720	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS20725	PWY-2161	folate polyglutamylation
JT25_RS20740	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JT25_RS20740	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JT25_RS20740	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JT25_RS20740	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JT25_RS20775	PWY-5525	D-glucuronate degradation I
JT25_RS20785	PWY-6167	flavin biosynthesis II (archaea)
JT25_RS20785	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS20785	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JT25_RS20790	PWY-6167	flavin biosynthesis II (archaea)
JT25_RS20790	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS20790	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JT25_RS20795	PWY-6167	flavin biosynthesis II (archaea)
JT25_RS20795	PWY-6168	flavin biosynthesis III (fungi)
JT25_RS20805	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JT25_RS20805	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JT25_RS20805	PWY-6896	thiamin salvage I
JT25_RS20805	PWY-6897	thiamin salvage II
JT25_RS20810	PWY-5269	cardiolipin biosynthesis II
JT25_RS20810	PWY-5668	cardiolipin biosynthesis I
JT25_RS20980	PWY-6966	methanol oxidation to formaldehyde I
JT25_RS21070	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JT25_RS21070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JT25_RS21070	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JT25_RS21070	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JT25_RS21160	PWY-2941	L-lysine biosynthesis II
JT25_RS21160	PWY-2942	L-lysine biosynthesis III
JT25_RS21160	PWY-5097	L-lysine biosynthesis VI
JT25_RS21170	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JT25_RS21170	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JT25_RS21170	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JT25_RS21215	PWY-3461	L-tyrosine biosynthesis II
JT25_RS21215	PWY-3462	L-phenylalanine biosynthesis II
JT25_RS21215	PWY-6120	L-tyrosine biosynthesis III
JT25_RS21215	PWY-6627	salinosporamide A biosynthesis
JT25_RS21215	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
JT25_RS21215	PWY-7626	bacilysin biosynthesis
JT25_RS21225	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
JT25_RS21230	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS21235	PWY-7205	CMP phosphorylation
JT25_RS21275	PWY-6123	inosine-5'-phosphate biosynthesis I
JT25_RS21275	PWY-7234	inosine-5'-phosphate biosynthesis III
JT25_RS21545	PWY-4983	L-citrulline-nitric oxide cycle
JT25_RS21545	PWY-4984	urea cycle
JT25_RS21545	PWY-5	canavanine biosynthesis
JT25_RS21545	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JT25_RS21545	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JT25_RS21790	PWY-5392	reductive TCA cycle II
JT25_RS21790	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JT25_RS21790	PWY-5690	TCA cycle II (plants and fungi)
JT25_RS21790	PWY-5913	TCA cycle VI (obligate autotrophs)
JT25_RS21790	PWY-6728	methylaspartate cycle
JT25_RS21790	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JT25_RS21790	PWY-7254	TCA cycle VII (acetate-producers)
JT25_RS21790	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JT25_RS21885	PWY-5367	petroselinate biosynthesis
JT25_RS21885	PWY-5515	L-arabinose degradation II
JT25_RS21885	PWY-5525	D-glucuronate degradation I
JT25_RS21885	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JT25_RS21885	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JT25_RS21885	PWY-5989	stearate biosynthesis II (bacteria and plants)
JT25_RS21885	PWY-5994	palmitate biosynthesis I (animals and fungi)
JT25_RS21885	PWY-6113	superpathway of mycolate biosynthesis
JT25_RS21885	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JT25_RS21885	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS21885	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS21885	PWY-7663	gondoate biosynthesis (anaerobic)
JT25_RS21885	PWY-7664	oleate biosynthesis IV (anaerobic)
JT25_RS21885	PWYG-321	mycolate biosynthesis
JT25_RS21910	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JT25_RS21910	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JT25_RS21910	PWY-5989	stearate biosynthesis II (bacteria and plants)
JT25_RS21910	PWY-5994	palmitate biosynthesis I (animals and fungi)
JT25_RS21910	PWY-6113	superpathway of mycolate biosynthesis
JT25_RS21910	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JT25_RS21910	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JT25_RS21910	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JT25_RS21910	PWY-7663	gondoate biosynthesis (anaerobic)
JT25_RS21910	PWY-7664	oleate biosynthesis IV (anaerobic)
JT25_RS21910	PWYG-321	mycolate biosynthesis
JT25_RS22200	PWY-6936	seleno-amino acid biosynthesis
JT25_RS22245	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
JT25_RS22275	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JT25_RS22320	PWY-6683	sulfate reduction III (assimilatory)
JT25_RS22350	PWY-5484	glycolysis II (from fructose 6-phosphate)
JT25_RS22395	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS22425	PWY-6672	<i>cis</i>-genanyl-CoA degradation
JT25_RS22425	PWY-7118	chitin degradation to ethanol
JT25_RS22600	PWY-1723	formaldehyde oxidation V (H<sub>4</sub>MPT pathway)
JT25_RS22600	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JT25_RS22740	PWY-6936	seleno-amino acid biosynthesis
JT25_RS22755	PWY-6823	molybdenum cofactor biosynthesis
JT25_RS22755	PWY-6891	thiazole biosynthesis II (Bacillus)
JT25_RS22755	PWY-6892	thiazole biosynthesis I (E. coli)
JT25_RS22755	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JT25_RS23265	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
JT25_RS23390	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
JT25_RS23390	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JT25_RS23425	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS23425	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JT25_RS23425	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS23425	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS23440	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS23440	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JT25_RS23440	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS23440	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS23465	PWY-6986	alginate degradation
JT25_RS23465	PWY-7651	heparan sulfate degradation
JT25_RS23470	PWY-6986	alginate degradation
JT25_RS23470	PWY-7651	heparan sulfate degradation
JT25_RS23480	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JT25_RS23480	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JT25_RS23480	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JT25_RS23480	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JT25_RS23490	PWY-6936	seleno-amino acid biosynthesis
JT25_RS23585	PWY-5194	siroheme biosynthesis
JT25_RS23585	PWY-5441	S-methyl-L-methionine cycle
JT25_RS23585	PWY-702	L-methionine biosynthesis II
JT25_RS23585	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JT25_RS23590	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
