locus-tag class description M301_RS00010 PF00308 Bacterial dnaA protein M301_RS00010 PF11638 DnaA N-terminal domain M301_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix M301_RS00015 PF02767 DNA polymerase III beta subunit, central domain M301_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain M301_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain M301_RS00020 PF18053 DNA gyrase B subunit insert domain M301_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS00020 PF01751 Toprim domain M301_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus M301_RS00020 PF00204 DNA gyrase B M301_RS00030 PF01695 IstB-like ATP binding protein M301_RS00035 PF00665 Integrase core domain M301_RS00045 PF00664 ABC transporter transmembrane region M301_RS00045 PF00005 ABC transporter M301_RS00045 PF03412 Peptidase C39 family M301_RS00055 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) M301_RS00055 PF06594 Haemolysin-type calcium binding protein related domain M301_RS00080 PF02321 Outer membrane efflux protein M301_RS00090 PF01695 IstB-like ATP binding protein M301_RS00125 PF00692 dUTPase M301_RS00135 PF00990 Diguanylate cyclase, GGDEF domain M301_RS00135 PF03707 Bacterial signalling protein N terminal repeat M301_RS00135 PF00563 EAL domain M301_RS00145 PF14403 Circularly permuted ATP-grasp type 2 M301_RS00145 PF04168 A predicted alpha-helical domain with a conserved ER motif. M301_RS00150 PF01841 Transglutaminase-like superfamily M301_RS00150 PF08379 Bacterial transglutaminase-like N-terminal region M301_RS00165 PF00311 Phosphoenolpyruvate carboxylase M301_RS00185 PF04168 A predicted alpha-helical domain with a conserved ER motif. M301_RS00185 PF14403 Circularly permuted ATP-grasp type 2 M301_RS00190 PF14403 Circularly permuted ATP-grasp type 2 M301_RS00205 PF00301 Rubredoxin M301_RS00215 PF00034 Cytochrome c M301_RS00235 PF00535 Glycosyl transferase family 2 M301_RS00240 PF14883 Hypothetical glycosyl hydrolase family 13 M301_RS00240 PF01522 Polysaccharide deacetylase M301_RS00250 PF00199 Catalase M301_RS00250 PF06628 Catalase-related immune-responsive M301_RS00255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS00255 PF03466 LysR substrate binding domain M301_RS00275 PF02785 Biotin carboxylase C-terminal domain M301_RS00275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS00275 PF00289 Biotin carboxylase, N-terminal domain M301_RS00280 PF00364 Biotin-requiring enzyme M301_RS00285 PF01220 Dehydroquinase class II M301_RS00290 PF00578 AhpC/TSA family M301_RS00295 PF02683 Cytochrome C biogenesis protein transmembrane region M301_RS00295 PF11412 Disulphide bond corrector protein DsbC M301_RS00305 PF00175 Oxidoreductase NAD-binding domain M301_RS00305 PF00111 2Fe-2S iron-sulfur cluster binding domain M301_RS00305 PF00970 Oxidoreductase FAD-binding domain M301_RS00325 PF00486 Transcriptional regulatory protein, C terminal M301_RS00325 PF00072 Response regulator receiver domain M301_RS00330 PF08521 Two-component sensor kinase N-terminal M301_RS00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS00330 PF00512 His Kinase A (phospho-acceptor) domain M301_RS00335 PF13344 Haloacid dehalogenase-like hydrolase M301_RS00335 PF00293 NUDIX domain M301_RS00345 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M301_RS00350 PF02602 Uroporphyrinogen-III synthase HemD M301_RS00355 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M301_RS00355 PF03900 Porphobilinogen deaminase, C-terminal domain M301_RS00360 PF00072 Response regulator receiver domain M301_RS00360 PF04397 LytTr DNA-binding domain M301_RS00365 PF06580 Histidine kinase M301_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS00365 PF07694 5TMR of 5TMR-LYT M301_RS00365 PF13492 GAF domain M301_RS00370 PF14698 Argininosuccinate lyase C-terminal M301_RS00370 PF00206 Lyase M301_RS00380 PF06969 HemN C-terminal domain M301_RS00380 PF04055 Radical SAM superfamily M301_RS00390 PF01725 Ham1 family M301_RS00395 PF01138 3' exoribonuclease family, domain 1 M301_RS00395 PF03725 3' exoribonuclease family, domain 2 M301_RS00405 PF00805 Pentapeptide repeats (8 copies) M301_RS00405 PF00069 Protein kinase domain M301_RS00410 PF08340 Domain of unknown function (DUF1732) M301_RS00410 PF03755 YicC-like family, N-terminal region M301_RS00415 PF00625 Guanylate kinase M301_RS00420 PF01192 RNA polymerase Rpb6 M301_RS00425 PF04607 Region found in RelA / SpoT proteins M301_RS00425 PF02824 TGS domain M301_RS00425 PF13291 ACT domain M301_RS00430 PF17191 RecG wedge domain M301_RS00430 PF00270 DEAD/DEAH box helicase M301_RS00430 PF00271 Helicase conserved C-terminal domain M301_RS00435 PF04345 Chorismate lyase M301_RS00440 PF01040 UbiA prenyltransferase family M301_RS00450 PF00572 Ribosomal protein L13 M301_RS00455 PF00380 Ribosomal protein S9/S16 M301_RS00460 PF01118 Semialdehyde dehydrogenase, NAD binding domain M301_RS00460 PF02774 Semialdehyde dehydrogenase, dimerisation domain M301_RS00475 PF01521 Iron-sulphur cluster biosynthesis M301_RS00500 PF00285 Citrate synthase, C-terminal domain M301_RS00505 PF03702 Anhydro-N-acetylmuramic acid kinase M301_RS00510 PF04225 Opacity-associated protein A LysM-like domain M301_RS00510 PF01551 Peptidase family M23 M301_RS00515 PF01479 S4 domain M301_RS00515 PF00579 tRNA synthetases class I (W and Y) M301_RS00570 PF12857 TOBE-like domain M301_RS00570 PF00005 ABC transporter M301_RS00570 PF17850 CysA C-terminal regulatory domain M301_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS00595 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS00605 PF00266 Aminotransferase class-V M301_RS00610 PF00291 Pyridoxal-phosphate dependent enzyme M301_RS00630 PF02576 RimP N-terminal domain M301_RS00630 PF17384 RimP C-terminal SH3 domain M301_RS00635 PF08529 NusA N-terminal domain M301_RS00635 PF13184 NusA-like KH domain M301_RS00640 PF08364 Bacterial translation initiation factor IF-2 associated region M301_RS00640 PF11987 Translation-initiation factor 2 M301_RS00640 PF00009 Elongation factor Tu GTP binding domain M301_RS00640 PF04760 Translation initiation factor IF-2, N-terminal region M301_RS00645 PF02033 Ribosome-binding factor A M301_RS00650 PF16198 tRNA pseudouridylate synthase B C-terminal domain M301_RS00650 PF09157 Pseudouridine synthase II TruB, C-terminal M301_RS00650 PF01509 TruB family pseudouridylate synthase (N terminal domain) M301_RS00655 PF00312 Ribosomal protein S15 M301_RS00660 PF03725 3' exoribonuclease family, domain 2 M301_RS00660 PF01138 3' exoribonuclease family, domain 1 M301_RS00660 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M301_RS00660 PF00575 S1 RNA binding domain M301_RS00660 PF00013 KH domain M301_RS00665 PF01258 Prokaryotic dksA/traR C4-type zinc finger M301_RS00670 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M301_RS00670 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M301_RS00745 PF00990 Diguanylate cyclase, GGDEF domain M301_RS00750 PF00158 Sigma-54 interaction domain M301_RS00750 PF02954 Bacterial regulatory protein, Fis family M301_RS00750 PF00072 Response regulator receiver domain M301_RS00755 PF13401 AAA domain M301_RS00755 PF01471 Putative peptidoglycan binding domain M301_RS00760 PF03958 Bacterial type II/III secretion system short domain M301_RS00760 PF00263 Bacterial type II and III secretion system protein M301_RS00770 PF00437 Type II/IV secretion system protein M301_RS00770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M301_RS00775 PF00482 Type II secretion system (T2SS), protein F M301_RS00805 PF00899 ThiF family M301_RS00810 PF01145 SPFH domain / Band 7 family M301_RS00810 PF16200 C-terminal region of band_7 M301_RS00825 PF04011 LemA family M301_RS00835 PF08264 Anticodon-binding domain of tRNA M301_RS00835 PF00133 tRNA synthetases class I (I, L, M and V) M301_RS00835 PF10458 Valyl tRNA synthetase tRNA binding arm M301_RS00840 PF01206 Sulfurtransferase TusA M301_RS00845 PF00581 Rhodanese-like domain M301_RS00850 PF00990 Diguanylate cyclase, GGDEF domain M301_RS00860 PF02277 Phosphoribosyltransferase M301_RS00865 PF02654 Cobalamin-5-phosphate synthase M301_RS00875 PF00155 Aminotransferase class I and II M301_RS00880 PF03186 CobD/Cbib protein M301_RS00885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M301_RS00885 PF07685 CobB/CobQ-like glutamine amidotransferase domain M301_RS00890 PF00069 Protein kinase domain M301_RS00895 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M301_RS00900 PF01497 Periplasmic binding protein M301_RS00905 PF00881 Nitroreductase family M301_RS00910 PF07685 CobB/CobQ-like glutamine amidotransferase domain M301_RS00910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M301_RS00915 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M301_RS00915 PF12557 Cob(I)alamin adenosyltransferase N terminal M301_RS00925 PF00593 TonB dependent receptor M301_RS00925 PF07715 TonB-dependent Receptor Plug Domain M301_RS00935 PF05164 Cell division protein ZapA M301_RS00955 PF00291 Pyridoxal-phosphate dependent enzyme M301_RS00955 PF00585 C-terminal regulatory domain of Threonine dehydratase M301_RS00960 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M301_RS00970 PF04362 Bacterial Fe(2+) trafficking M301_RS00975 PF01219 Prokaryotic diacylglycerol kinase M301_RS00980 PF00563 EAL domain M301_RS00980 PF00990 Diguanylate cyclase, GGDEF domain M301_RS00980 PF03707 Bacterial signalling protein N terminal repeat M301_RS00985 PF03352 Methyladenine glycosylase M301_RS00990 PF01022 Bacterial regulatory protein, arsR family M301_RS00995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M301_RS01005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS01005 PF03466 LysR substrate binding domain M301_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS01015 PF03466 LysR substrate binding domain M301_RS01040 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M301_RS01040 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M301_RS01045 PF00589 Phage integrase family M301_RS01045 PF02899 Phage integrase, N-terminal SAM-like domain M301_RS01055 PF01678 Diaminopimelate epimerase M301_RS01060 PF02773 S-adenosylmethionine synthetase, C-terminal domain M301_RS01060 PF02772 S-adenosylmethionine synthetase, central domain M301_RS01060 PF00438 S-adenosylmethionine synthetase, N-terminal domain M301_RS01065 PF11871 Domain of unknown function (DUF3391) M301_RS01065 PF01966 HD domain M301_RS01070 PF05221 S-adenosyl-L-homocysteine hydrolase M301_RS01070 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain M301_RS01075 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M301_RS01080 PF02219 Methylenetetrahydrofolate reductase M301_RS01085 PF04361 Protein of unknown function (DUF494) M301_RS01090 PF02481 DNA recombination-mediator protein A M301_RS01090 PF17782 DprA winged helix domain M301_RS01100 PF01327 Polypeptide deformylase M301_RS01105 PF02911 Formyl transferase, C-terminal domain M301_RS01105 PF00551 Formyl transferase M301_RS01110 PF01435 Peptidase family M48 M301_RS01120 PF01189 16S rRNA methyltransferase RsmB/F M301_RS01120 PF01029 NusB family M301_RS01130 PF00512 His Kinase A (phospho-acceptor) domain M301_RS01130 PF00989 PAS fold M301_RS01130 PF00672 HAMP domain M301_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS01135 PF00158 Sigma-54 interaction domain M301_RS01135 PF00072 Response regulator receiver domain M301_RS01135 PF02954 Bacterial regulatory protein, Fis family M301_RS01145 PF13419 Haloacid dehalogenase-like hydrolase M301_RS01155 PF05724 Thiopurine S-methyltransferase (TPMT) M301_RS01160 PF01432 Peptidase family M3 M301_RS01170 PF02896 PEP-utilising enzyme, TIM barrel domain M301_RS01170 PF00391 PEP-utilising enzyme, mobile domain M301_RS01170 PF05524 PEP-utilising enzyme, N-terminal M301_RS01175 PF00381 PTS HPr component phosphorylation site M301_RS01185 PF03668 P-loop ATPase protein family M301_RS01190 PF07475 HPr Serine kinase C-terminal domain M301_RS01190 PF02603 HPr Serine kinase N terminus M301_RS01195 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M301_RS01200 PF04552 Sigma-54, DNA binding domain M301_RS01200 PF00309 Sigma-54 factor, Activator interacting domain (AID) M301_RS01200 PF04963 Sigma-54 factor, core binding domain M301_RS01205 PF00005 ABC transporter M301_RS01205 PF12399 Branched-chain amino acid ATP-binding cassette transporter M301_RS01210 PF03968 OstA-like protein M301_RS01225 PF00571 CBS domain M301_RS01225 PF01380 SIS domain M301_RS01230 PF00999 Sodium/hydrogen exchanger family M301_RS01230 PF02080 TrkA-C domain M301_RS01230 PF02254 TrkA-N domain M301_RS01235 PF01266 FAD dependent oxidoreductase M301_RS01250 PF01967 MoaC family M301_RS01255 PF01435 Peptidase family M48 M301_RS01255 PF13181 Tetratricopeptide repeat M301_RS01270 PF10417 C-terminal domain of 1-Cys peroxiredoxin M301_RS01270 PF00578 AhpC/TSA family M301_RS01275 PF13192 Thioredoxin domain M301_RS01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS01280 PF13091 PLD-like domain M301_RS01290 PF06965 Na+/H+ antiporter 1 M301_RS01295 PF01595 Cyclin M transmembrane N-terminal domain M301_RS01295 PF03471 Transporter associated domain M301_RS01295 PF00571 CBS domain M301_RS01300 PF00308 Bacterial dnaA protein M301_RS01305 PF01594 AI-2E family transporter M301_RS01310 PF02769 AIR synthase related protein, C-terminal domain M301_RS01310 PF00586 AIR synthase related protein, N-terminal domain M301_RS01325 PF01029 NusB family M301_RS01325 PF01189 16S rRNA methyltransferase RsmB/F M301_RS01330 PF00375 Sodium:dicarboxylate symporter family M301_RS01335 PF13439 Glycosyltransferase Family 4 M301_RS01335 PF00534 Glycosyl transferases group 1 M301_RS01345 PF01569 PAP2 superfamily M301_RS01350 PF01435 Peptidase family M48 M301_RS01370 PF00873 AcrB/AcrD/AcrF family M301_RS01375 PF13533 Biotin-lipoyl like M301_RS01380 PF01510 N-acetylmuramoyl-L-alanine amidase M301_RS01390 PF00158 Sigma-54 interaction domain M301_RS01390 PF00072 Response regulator receiver domain M301_RS01390 PF02954 Bacterial regulatory protein, Fis family M301_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS01395 PF00512 His Kinase A (phospho-acceptor) domain M301_RS01405 PF04542 Sigma-70 region 2 M301_RS01405 PF08281 Sigma-70, region 4 M301_RS01430 PF03739 Lipopolysaccharide export system permease LptF/LptG M301_RS01435 PF02789 Cytosol aminopeptidase family, N-terminal domain M301_RS01435 PF00883 Cytosol aminopeptidase family, catalytic domain M301_RS01450 PF01597 Glycine cleavage H-protein M301_RS01455 PF00768 D-alanyl-D-alanine carboxypeptidase M301_RS01460 PF01131 DNA topoisomerase M301_RS01460 PF01751 Toprim domain M301_RS01460 PF13368 Topoisomerase C-terminal repeat M301_RS01465 PF01171 PP-loop family M301_RS01470 PF03707 Bacterial signalling protein N terminal repeat M301_RS01470 PF00990 Diguanylate cyclase, GGDEF domain M301_RS01470 PF00563 EAL domain M301_RS01485 PF02390 Putative methyltransferase M301_RS01490 PF01926 50S ribosome-binding GTPase M301_RS01495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M301_RS01510 PF00005 ABC transporter M301_RS01515 PF02405 Permease MlaE M301_RS01520 PF02470 MlaD protein M301_RS01535 PF00005 ABC transporter M301_RS01540 PF01061 ABC-2 type transporter M301_RS01545 PF01722 BolA-like protein M301_RS01550 PF00462 Glutaredoxin M301_RS01555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M301_RS01560 PF01634 ATP phosphoribosyltransferase M301_RS01565 PF00815 Histidinol dehydrogenase M301_RS01570 PF00155 Aminotransferase class I and II M301_RS01575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M301_RS01580 PF00475 Imidazoleglycerol-phosphate dehydratase M301_RS01585 PF00117 Glutamine amidotransferase class-I M301_RS01590 PF00977 Histidine biosynthesis protein M301_RS01595 PF00977 Histidine biosynthesis protein M301_RS01600 PF01502 Phosphoribosyl-AMP cyclohydrolase M301_RS01605 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M301_RS01610 PF01230 HIT domain M301_RS01615 PF02416 mttA/Hcf106 family M301_RS01620 PF02416 mttA/Hcf106 family M301_RS01625 PF00902 Sec-independent protein translocase protein (TatC) M301_RS01630 PF13180 PDZ domain M301_RS01630 PF17820 PDZ domain M301_RS01635 PF01784 NIF3 (NGG1p interacting factor 3) M301_RS01640 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M301_RS01640 PF00355 Rieske [2Fe-2S] domain M301_RS01645 PF00033 Cytochrome b/b6/petB M301_RS01645 PF00032 Cytochrome b(C-terminal)/b6/petD M301_RS01650 PF02167 Cytochrome C1 family M301_RS01655 PF02798 Glutathione S-transferase, N-terminal domain M301_RS01655 PF00043 Glutathione S-transferase, C-terminal domain M301_RS01660 PF04386 Stringent starvation protein B M301_RS01685 PF00009 Elongation factor Tu GTP binding domain M301_RS01685 PF03143 Elongation factor Tu C-terminal domain M301_RS01685 PF03144 Elongation factor Tu domain 2 M301_RS01695 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M301_RS01700 PF00467 KOW motif M301_RS01700 PF02357 Transcription termination factor nusG M301_RS01705 PF00298 Ribosomal protein L11, RNA binding domain M301_RS01705 PF03946 Ribosomal protein L11, N-terminal domain M301_RS01710 PF00687 Ribosomal protein L1p/L10e family M301_RS01715 PF00466 Ribosomal protein L10 M301_RS01720 PF00542 Ribosomal protein L7/L12 C-terminal domain M301_RS01720 PF16320 Ribosomal protein L7/L12 dimerisation domain M301_RS01725 PF04565 RNA polymerase Rpb2, domain 3 M301_RS01725 PF10385 RNA polymerase beta subunit external 1 domain M301_RS01725 PF00562 RNA polymerase Rpb2, domain 6 M301_RS01725 PF04560 RNA polymerase Rpb2, domain 7 M301_RS01725 PF04561 RNA polymerase Rpb2, domain 2 M301_RS01725 PF04563 RNA polymerase beta subunit M301_RS01730 PF04983 RNA polymerase Rpb1, domain 3 M301_RS01730 PF04997 RNA polymerase Rpb1, domain 1 M301_RS01730 PF05000 RNA polymerase Rpb1, domain 4 M301_RS01730 PF04998 RNA polymerase Rpb1, domain 5 M301_RS01730 PF00623 RNA polymerase Rpb1, domain 2 M301_RS01735 PF00164 Ribosomal protein S12/S23 M301_RS01740 PF00177 Ribosomal protein S7p/S5e M301_RS01745 PF00009 Elongation factor Tu GTP binding domain M301_RS01745 PF03764 Elongation factor G, domain IV M301_RS01745 PF14492 Elongation Factor G, domain II M301_RS01745 PF00679 Elongation factor G C-terminus M301_RS01745 PF03144 Elongation factor Tu domain 2 M301_RS01750 PF03143 Elongation factor Tu C-terminal domain M301_RS01750 PF03144 Elongation factor Tu domain 2 M301_RS01750 PF00009 Elongation factor Tu GTP binding domain M301_RS01755 PF00338 Ribosomal protein S10p/S20e M301_RS01760 PF00297 Ribosomal protein L3 M301_RS01765 PF00573 Ribosomal protein L4/L1 family M301_RS01770 PF00276 Ribosomal protein L23 M301_RS01775 PF00181 Ribosomal Proteins L2, RNA binding domain M301_RS01775 PF03947 Ribosomal Proteins L2, C-terminal domain M301_RS01780 PF00203 Ribosomal protein S19 M301_RS01785 PF00237 Ribosomal protein L22p/L17e M301_RS01790 PF00189 Ribosomal protein S3, C-terminal domain M301_RS01790 PF07650 KH domain M301_RS01795 PF00252 Ribosomal protein L16p/L10e M301_RS01800 PF00831 Ribosomal L29 protein M301_RS01805 PF00366 Ribosomal protein S17 M301_RS01810 PF00238 Ribosomal protein L14p/L23e M301_RS01815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M301_RS01820 PF00281 Ribosomal protein L5 M301_RS01820 PF00673 ribosomal L5P family C-terminus M301_RS01825 PF00253 Ribosomal protein S14p/S29e M301_RS01830 PF00410 Ribosomal protein S8 M301_RS01835 PF00347 Ribosomal protein L6 M301_RS01840 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M301_RS01845 PF03719 Ribosomal protein S5, C-terminal domain M301_RS01845 PF00333 Ribosomal protein S5, N-terminal domain M301_RS01850 PF00327 Ribosomal protein L30p/L7e M301_RS01855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M301_RS01860 PF00344 SecY translocase M301_RS01865 PF00416 Ribosomal protein S13/S18 M301_RS01870 PF00411 Ribosomal protein S11 M301_RS01875 PF01479 S4 domain M301_RS01875 PF00163 Ribosomal protein S4/S9 N-terminal domain M301_RS01880 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M301_RS01880 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M301_RS01880 PF01000 RNA polymerase Rpb3/RpoA insert domain M301_RS01885 PF01196 Ribosomal protein L17 M301_RS01895 PF01544 CorA-like Mg2+ transporter protein M301_RS01900 PF12795 Mechanosensitive ion channel porin domain M301_RS01900 PF00924 Mechanosensitive ion channel M301_RS01900 PF12794 Mechanosensitive ion channel inner membrane domain 1 M301_RS01905 PF00471 Ribosomal protein L33 M301_RS01910 PF00830 Ribosomal L28 family M301_RS01915 PF00692 dUTPase M301_RS01920 PF00593 TonB dependent receptor M301_RS01920 PF07715 TonB-dependent Receptor Plug Domain M301_RS01925 PF02441 Flavoprotein M301_RS01925 PF04127 DNA / pantothenate metabolism flavoprotein M301_RS01930 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M301_RS01930 PF02896 PEP-utilising enzyme, TIM barrel domain M301_RS01930 PF00391 PEP-utilising enzyme, mobile domain M301_RS01940 PF04002 RadC-like JAB domain M301_RS01950 PF00664 ABC transporter transmembrane region M301_RS01950 PF00005 ABC transporter M301_RS01955 PF13722 5TM C-terminal transporter carbon starvation CstA M301_RS01955 PF02554 Carbon starvation protein CstA M301_RS01975 PF01790 Prolipoprotein diacylglyceryl transferase M301_RS01980 PF00990 Diguanylate cyclase, GGDEF domain M301_RS01980 PF03707 Bacterial signalling protein N terminal repeat M301_RS01980 PF00563 EAL domain M301_RS01985 PF00920 Dehydratase family M301_RS01990 PF01263 Aldose 1-epimerase M301_RS01995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M301_RS02000 PF13520 Amino acid permease M301_RS02005 PF02127 Aminopeptidase I zinc metalloprotease (M18) M301_RS02010 PF01218 Coproporphyrinogen III oxidase M301_RS02015 PF02844 Phosphoribosylglycinamide synthetase, N domain M301_RS02015 PF02843 Phosphoribosylglycinamide synthetase, C domain M301_RS02015 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M301_RS02020 PF02142 MGS-like domain M301_RS02020 PF01808 AICARFT/IMPCHase bienzyme M301_RS02025 PF02954 Bacterial regulatory protein, Fis family M301_RS02030 PF01207 Dihydrouridine synthase (Dus) M301_RS02035 PF00083 Sugar (and other) transporter M301_RS02035 PF07690 Major Facilitator Superfamily M301_RS02040 PF03692 Putative zinc- or iron-chelating domain M301_RS02045 PF00994 Probable molybdopterin binding domain M301_RS02045 PF02464 Competence-damaged protein M301_RS02045 PF18146 Damage-inducible protein CinA KH domain M301_RS02050 PF03707 Bacterial signalling protein N terminal repeat M301_RS02050 PF00990 Diguanylate cyclase, GGDEF domain M301_RS02050 PF00563 EAL domain M301_RS02075 PF01367 5'-3' exonuclease, C-terminal SAM fold M301_RS02075 PF01612 3'-5' exonuclease M301_RS02075 PF00476 DNA polymerase family A M301_RS02075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M301_RS02080 PF03641 Possible lysine decarboxylase M301_RS02090 PF01636 Phosphotransferase enzyme family M301_RS02100 PF00580 UvrD/REP helicase N-terminal domain M301_RS02100 PF13361 UvrD-like helicase C-terminal domain M301_RS02110 PF00990 Diguanylate cyclase, GGDEF domain M301_RS02110 PF00563 EAL domain M301_RS02110 PF03707 Bacterial signalling protein N terminal repeat M301_RS02125 PF03707 Bacterial signalling protein N terminal repeat M301_RS02125 PF00563 EAL domain M301_RS02125 PF00990 Diguanylate cyclase, GGDEF domain M301_RS02130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M301_RS02130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M301_RS02135 PF00118 TCP-1/cpn60 chaperonin family M301_RS02140 PF00166 Chaperonin 10 Kd subunit M301_RS02150 PF00248 Aldo/keto reductase family M301_RS02155 PF03831 PhnA domain M301_RS02155 PF08274 PhnA Zinc-Ribbon M301_RS02160 PF02253 Phospholipase A1 M301_RS02175 PF12392 Collagenase M301_RS02175 PF01136 Peptidase family U32 M301_RS02180 PF00202 Aminotransferase class-III M301_RS02185 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M301_RS02190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M301_RS02195 PF02566 OsmC-like protein M301_RS02210 PF03232 Ubiquinone biosynthesis protein COQ7 M301_RS02215 PF13183 4Fe-4S dicluster domain M301_RS02215 PF02754 Cysteine-rich domain M301_RS02220 PF03572 Peptidase family S41 M301_RS02220 PF13180 PDZ domain M301_RS02230 PF00877 NlpC/P60 family M301_RS02235 PF04851 Type III restriction enzyme, res subunit M301_RS02235 PF13307 Helicase C-terminal domain M301_RS02240 PF08534 Redoxin M301_RS02285 PF00005 ABC transporter M301_RS02290 PF03379 CcmB protein M301_RS02295 PF01578 Cytochrome C assembly protein M301_RS02300 PF04995 Heme exporter protein D (CcmD) M301_RS02305 PF03100 CcmE M301_RS02310 PF01578 Cytochrome C assembly protein M301_RS02310 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M301_RS02315 PF08534 Redoxin M301_RS02320 PF03918 Cytochrome C biogenesis protein M301_RS02330 PF11940 Domain of unknown function (DUF3458) Ig-like fold M301_RS02330 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M301_RS02330 PF01433 Peptidase family M1 domain M301_RS02335 PF00999 Sodium/hydrogen exchanger family M301_RS02335 PF02254 TrkA-N domain M301_RS02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS02340 PF00672 HAMP domain M301_RS02340 PF00512 His Kinase A (phospho-acceptor) domain M301_RS02345 PF00072 Response regulator receiver domain M301_RS02345 PF00486 Transcriptional regulatory protein, C terminal M301_RS02360 PF00873 AcrB/AcrD/AcrF family M301_RS02375 PF07963 Prokaryotic N-terminal methylation motif M301_RS02375 PF08334 Type II secretion system (T2SS), protein G M301_RS02380 PF00482 Type II secretion system (T2SS), protein F M301_RS02385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M301_RS02385 PF00437 Type II/IV secretion system protein M301_RS02410 PF03958 Bacterial type II/III secretion system short domain M301_RS02410 PF00263 Bacterial type II and III secretion system protein M301_RS02415 PF00114 Pilin (bacterial filament) M301_RS02415 PF07963 Prokaryotic N-terminal methylation motif M301_RS02420 PF07963 Prokaryotic N-terminal methylation motif M301_RS02430 PF00072 Response regulator receiver domain M301_RS02430 PF00196 Bacterial regulatory proteins, luxR family M301_RS02440 PF00394 Multicopper oxidase M301_RS02440 PF07732 Multicopper oxidase M301_RS02485 PF00072 Response regulator receiver domain M301_RS02485 PF00196 Bacterial regulatory proteins, luxR family M301_RS02490 PF01464 Transglycosylase SLT domain M301_RS02490 PF10145 Phage-related minor tail protein M301_RS02490 PF01551 Peptidase family M23 M301_RS02495 PF07730 Histidine kinase M301_RS02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS02505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M301_RS02510 PF01758 Sodium Bile acid symporter family M301_RS02515 PF01451 Low molecular weight phosphotyrosine protein phosphatase M301_RS02525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M301_RS02530 PF00149 Calcineurin-like phosphoesterase M301_RS02550 PF00294 pfkB family carbohydrate kinase M301_RS02570 PF03653 Uncharacterised protein family (UPF0093) M301_RS02575 PF08534 Redoxin M301_RS02580 PF02754 Cysteine-rich domain M301_RS02580 PF13183 4Fe-4S dicluster domain M301_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS02605 PF00512 His Kinase A (phospho-acceptor) domain M301_RS02605 PF00989 PAS fold M301_RS02605 PF11808 Phosphate regulon sensor protein PhoR M301_RS02610 PF00072 Response regulator receiver domain M301_RS02610 PF00486 Transcriptional regulatory protein, C terminal M301_RS02615 PF07690 Major Facilitator Superfamily M301_RS02620 PF00885 6,7-dimethyl-8-ribityllumazine synthase M301_RS02625 PF01029 NusB family M301_RS02640 PF00072 Response regulator receiver domain M301_RS02645 PF00149 Calcineurin-like phosphoesterase M301_RS02650 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M301_RS02655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M301_RS02670 PF09190 DALR domain M301_RS02670 PF01406 tRNA synthetases class I (C) catalytic domain M301_RS02680 PF00990 Diguanylate cyclase, GGDEF domain M301_RS02685 PF01960 ArgJ family M301_RS02695 PF02581 Thiamine monophosphate synthase M301_RS02705 PF03884 DNA gyrase inhibitor YacG M301_RS02710 PF07072 Cell division protein M301_RS02715 PF01121 Dephospho-CoA kinase M301_RS02720 PF06750 Bacterial Peptidase A24 N-terminal domain M301_RS02720 PF01478 Type IV leader peptidase family M301_RS02730 PF00348 Polyprenyl synthetase M301_RS02735 PF00829 Ribosomal prokaryotic L21 protein M301_RS02740 PF01016 Ribosomal L27 protein M301_RS02745 PF01018 GTP1/OBG M301_RS02745 PF01926 50S ribosome-binding GTPase M301_RS02750 PF01472 PUA domain M301_RS02750 PF00696 Amino acid kinase family M301_RS02755 PF00731 AIR carboxylase M301_RS02760 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M301_RS02760 PF02222 ATP-grasp domain M301_RS02765 PF01649 Ribosomal protein S20 M301_RS02770 PF03023 Lipid II flippase MurJ M301_RS02775 PF06574 FAD synthetase M301_RS02775 PF01687 Riboflavin kinase M301_RS02780 PF00133 tRNA synthetases class I (I, L, M and V) M301_RS02780 PF06827 Zinc finger found in FPG and IleRS M301_RS02780 PF08264 Anticodon-binding domain of tRNA M301_RS02785 PF01252 Signal peptidase (SPase) II M301_RS02795 PF03707 Bacterial signalling protein N terminal repeat M301_RS02795 PF00990 Diguanylate cyclase, GGDEF domain M301_RS02795 PF00563 EAL domain M301_RS02800 PF00072 Response regulator receiver domain M301_RS02805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS02805 PF00989 PAS fold M301_RS02805 PF00512 His Kinase A (phospho-acceptor) domain M301_RS02810 PF00226 DnaJ domain M301_RS02810 PF01556 DnaJ C terminal domain M301_RS02820 PF05661 Protein of unknown function (DUF808) M301_RS02825 PF00072 Response regulator receiver domain M301_RS02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS02830 PF00512 His Kinase A (phospho-acceptor) domain M301_RS02835 PF07715 TonB-dependent Receptor Plug Domain M301_RS02835 PF00593 TonB dependent receptor M301_RS02845 PF00563 EAL domain M301_RS02845 PF00990 Diguanylate cyclase, GGDEF domain M301_RS02845 PF03707 Bacterial signalling protein N terminal repeat M301_RS02850 PF00578 AhpC/TSA family M301_RS02880 PF00403 Heavy-metal-associated domain M301_RS02885 PF02861 Clp amino terminal domain, pathogenicity island component M301_RS02885 PF07724 AAA domain (Cdc48 subfamily) M301_RS02885 PF00004 ATPase family associated with various cellular activities (AAA) M301_RS02885 PF10431 C-terminal, D2-small domain, of ClpB protein M301_RS02885 PF17871 AAA lid domain M301_RS02890 PF00497 Bacterial extracellular solute-binding proteins, family 3 M301_RS02890 PF01464 Transglycosylase SLT domain M301_RS02910 PF01894 Uncharacterised protein family UPF0047 M301_RS02920 PF01476 LysM domain M301_RS02920 PF04972 BON domain M301_RS02930 PF01551 Peptidase family M23 M301_RS02935 PF01676 Metalloenzyme superfamily M301_RS02935 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M301_RS02940 PF00581 Rhodanese-like domain M301_RS02940 PF00753 Metallo-beta-lactamase superfamily M301_RS02945 PF00462 Glutaredoxin M301_RS02950 PF02556 Preprotein translocase subunit SecB M301_RS02960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M301_RS02960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M301_RS02965 PF04307 LexA-binding, inner membrane-associated putative hydrolase M301_RS02970 PF00588 SpoU rRNA Methylase family M301_RS02975 PF00156 Phosphoribosyl transferase domain M301_RS02980 PF06968 Biotin and Thiamin Synthesis associated domain M301_RS02980 PF04055 Radical SAM superfamily M301_RS02985 PF00155 Aminotransferase class I and II M301_RS02990 PF00561 alpha/beta hydrolase fold M301_RS02995 PF08241 Methyltransferase domain M301_RS03005 PF01435 Peptidase family M48 M301_RS03010 PF01467 Cytidylyltransferase-like M301_RS03015 PF00171 Aldehyde dehydrogenase family M301_RS03035 PF09334 tRNA synthetases class I (M) M301_RS03035 PF08264 Anticodon-binding domain of tRNA M301_RS03035 PF00133 tRNA synthetases class I (I, L, M and V) M301_RS03035 PF13603 Leucyl-tRNA synthetase, Domain 2 M301_RS03040 PF05191 Adenylate kinase, active site lid M301_RS03045 PF00398 Ribosomal RNA adenine dimethylase M301_RS03050 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M301_RS03055 PF00639 PPIC-type PPIASE domain M301_RS03055 PF09312 SurA N-terminal domain M301_RS03060 PF04453 LPS transport system D M301_RS03065 PF01636 Phosphotransferase enzyme family M301_RS03070 PF00483 Nucleotidyl transferase M301_RS03075 PF00557 Metallopeptidase family M24 M301_RS03075 PF05195 Aminopeptidase P, N-terminal domain M301_RS03080 PF01494 FAD binding domain M301_RS03085 PF01494 FAD binding domain M301_RS03090 PF13098 Thioredoxin-like domain M301_RS03090 PF10411 Disulfide bond isomerase protein N-terminus M301_RS03095 PF00482 Type II secretion system (T2SS), protein F M301_RS03100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M301_RS03100 PF00437 Type II/IV secretion system protein M301_RS03105 PF00313 'Cold-shock' DNA-binding domain M301_RS03110 PF00180 Isocitrate/isopropylmalate dehydrogenase M301_RS03115 PF00849 RNA pseudouridylate synthase M301_RS03120 PF00117 Glutamine amidotransferase class-I M301_RS03125 PF01264 Chorismate synthase M301_RS03135 PF12832 MFS_1 like family M301_RS03150 PF00072 Response regulator receiver domain M301_RS03150 PF00486 Transcriptional regulatory protein, C terminal M301_RS03155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS03155 PF00512 His Kinase A (phospho-acceptor) domain M301_RS03155 PF08521 Two-component sensor kinase N-terminal M301_RS03160 PF02649 Type I GTP cyclohydrolase folE2 M301_RS03165 PF02779 Transketolase, pyrimidine binding domain M301_RS03165 PF02780 Transketolase, C-terminal domain M301_RS03165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M301_RS03170 PF00348 Polyprenyl synthetase M301_RS03175 PF02609 Exonuclease VII small subunit M301_RS03185 PF12706 Beta-lactamase superfamily domain M301_RS03190 PF00581 Rhodanese-like domain M301_RS03205 PF00114 Pilin (bacterial filament) M301_RS03205 PF07963 Prokaryotic N-terminal methylation motif M301_RS03215 PF01436 NHL repeat M301_RS03215 PF00934 PE family M301_RS03220 PF00293 NUDIX domain M301_RS03225 PF02666 Phosphatidylserine decarboxylase M301_RS03230 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M301_RS03230 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M301_RS03235 PF10369 Small subunit of acetolactate synthase M301_RS03240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M301_RS03240 PF00205 Thiamine pyrophosphate enzyme, central domain M301_RS03240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M301_RS03245 PF00437 Type II/IV secretion system protein M301_RS03245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M301_RS03250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M301_RS03250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M301_RS03255 PF13417 Glutathione S-transferase, N-terminal domain M301_RS03255 PF00043 Glutathione S-transferase, C-terminal domain M301_RS03270 PF04337 Protein of unknown function, DUF480 M301_RS03280 PF00293 NUDIX domain M301_RS03285 PF02545 Maf-like protein M301_RS03290 PF00575 S1 RNA binding domain M301_RS03290 PF10150 Ribonuclease E/G family M301_RS03295 PF00350 Dynamin family M301_RS03300 PF02325 YGGT family M301_RS03305 PF03807 NADP oxidoreductase coenzyme F420-dependent M301_RS03305 PF14748 Pyrroline-5-carboxylate reductase dimerisation M301_RS03310 PF01168 Alanine racemase, N-terminal domain M301_RS03315 PF00437 Type II/IV secretion system protein M301_RS03320 PF00437 Type II/IV secretion system protein M301_RS03335 PF01979 Amidohydrolase family M301_RS03340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M301_RS03340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M301_RS03345 PF00156 Phosphoribosyl transferase domain M301_RS03350 PF03652 Holliday junction resolvase M301_RS03355 PF02622 Uncharacterized ACR, COG1678 M301_RS03360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M301_RS03360 PF00925 GTP cyclohydrolase II M301_RS03365 PF00677 Lumazine binding domain M301_RS03370 PF08448 PAS fold M301_RS03370 PF00990 Diguanylate cyclase, GGDEF domain M301_RS03370 PF00563 EAL domain M301_RS03375 PF12704 MacB-like periplasmic core domain M301_RS03375 PF02687 FtsX-like permease family M301_RS03380 PF00005 ABC transporter M301_RS03385 PF03772 Competence protein M301_RS03385 PF00753 Metallo-beta-lactamase superfamily M301_RS03395 PF02472 Biopolymer transport protein ExbD/TolR M301_RS03400 PF00664 ABC transporter transmembrane region M301_RS03400 PF00005 ABC transporter M301_RS03405 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M301_RS03410 PF03966 Trm112p-like protein M301_RS03415 PF02348 Cytidylyltransferase M301_RS03455 PF00883 Cytosol aminopeptidase family, catalytic domain M301_RS03455 PF02789 Cytosol aminopeptidase family, N-terminal domain M301_RS03460 PF00456 Transketolase, thiamine diphosphate binding domain M301_RS03460 PF17831 Pyruvate dehydrogenase E1 component middle domain M301_RS03465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M301_RS03465 PF02817 e3 binding domain M301_RS03465 PF00364 Biotin-requiring enzyme M301_RS03475 PF01022 Bacterial regulatory protein, arsR family M301_RS03485 PF00912 Transglycosylase M301_RS03485 PF06832 Penicillin-Binding Protein C-terminus Family M301_RS03485 PF00905 Penicillin binding protein transpeptidase domain M301_RS03490 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain M301_RS03490 PF11974 Bacterial alpha-2-macroglobulin MG3 domain M301_RS03490 PF07703 Alpha-2-macroglobulin bait region domain M301_RS03490 PF00207 Alpha-2-macroglobulin family M301_RS03490 PF17962 Bacterial macroglobulin domain 6 M301_RS03490 PF01835 MG2 domain M301_RS03490 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain M301_RS03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS03495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M301_RS03500 PF01565 FAD binding domain M301_RS03500 PF02913 FAD linked oxidases, C-terminal domain M301_RS03515 PF03358 NADPH-dependent FMN reductase M301_RS03530 PF08328 Adenylosuccinate lyase C-terminal M301_RS03530 PF00206 Lyase M301_RS03535 PF00072 Response regulator receiver domain M301_RS03540 PF00989 PAS fold M301_RS03540 PF18415 Histidine kinase receptor ArcB trans-membrane domain M301_RS03540 PF00512 His Kinase A (phospho-acceptor) domain M301_RS03540 PF01627 Hpt domain M301_RS03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS03540 PF00072 Response regulator receiver domain M301_RS03545 PF03972 MmgE/PrpD family M301_RS03550 PF00285 Citrate synthase, C-terminal domain M301_RS03565 PF01575 MaoC like domain M301_RS03570 PF03328 HpcH/HpaI aldolase/citrate lyase family M301_RS03575 PF00392 Bacterial regulatory proteins, gntR family M301_RS03575 PF07702 UTRA domain M301_RS03580 PF03949 Malic enzyme, NAD binding domain M301_RS03580 PF00390 Malic enzyme, N-terminal domain M301_RS03585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M301_RS03595 PF00890 FAD binding domain M301_RS03595 PF02910 Fumarate reductase flavoprotein C-term M301_RS03600 PF13085 2Fe-2S iron-sulfur cluster binding domain M301_RS03605 PF03937 Flavinator of succinate dehydrogenase M301_RS03615 PF00501 AMP-binding enzyme M301_RS03615 PF13193 AMP-binding enzyme C-terminal domain M301_RS03630 PF11791 Aconitate B N-terminal domain M301_RS03630 PF00330 Aconitase family (aconitate hydratase) M301_RS03630 PF06434 Aconitate hydratase 2 N-terminus M301_RS03645 PF03350 Uncharacterized protein family, UPF0114 M301_RS03650 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M301_RS03655 PF01545 Cation efflux family M301_RS03670 PF08459 UvrC Helix-hairpin-helix N-terminal M301_RS03670 PF02151 UvrB/uvrC motif M301_RS03670 PF01541 GIY-YIG catalytic domain M301_RS03675 PF01066 CDP-alcohol phosphatidyltransferase M301_RS03690 PF03412 Peptidase C39 family M301_RS03690 PF00664 ABC transporter transmembrane region M301_RS03690 PF00005 ABC transporter M301_RS03700 PF00196 Bacterial regulatory proteins, luxR family M301_RS03705 PF12792 CSS motif domain associated with EAL M301_RS03705 PF00563 EAL domain M301_RS03730 PF16363 GDP-mannose 4,6 dehydratase M301_RS03735 PF00534 Glycosyl transferases group 1 M301_RS03735 PF13579 Glycosyl transferase 4-like domain M301_RS03745 PF00483 Nucleotidyl transferase M301_RS03750 PF08334 Type II secretion system (T2SS), protein G M301_RS03750 PF07963 Prokaryotic N-terminal methylation motif M301_RS03755 PF00482 Type II secretion system (T2SS), protein F M301_RS03760 PF00437 Type II/IV secretion system protein M301_RS03760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M301_RS03785 PF07660 Secretin and TonB N terminus short domain M301_RS03785 PF03958 Bacterial type II/III secretion system short domain M301_RS03785 PF00263 Bacterial type II and III secretion system protein M301_RS03785 PF11741 AMIN domain M301_RS03790 PF08334 Type II secretion system (T2SS), protein G M301_RS03790 PF07963 Prokaryotic N-terminal methylation motif M301_RS03795 PF07963 Prokaryotic N-terminal methylation motif M301_RS03805 PF01464 Transglycosylase SLT domain M301_RS03810 PF03472 Autoinducer binding domain M301_RS03810 PF00196 Bacterial regulatory proteins, luxR family M301_RS03835 PF01618 MotA/TolQ/ExbB proton channel family M301_RS03840 PF02472 Biopolymer transport protein ExbD/TolR M301_RS03845 PF02472 Biopolymer transport protein ExbD/TolR M301_RS03895 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M301_RS03895 PF13807 G-rich domain on putative tyrosine kinase M301_RS03895 PF02706 Chain length determinant protein M301_RS03900 PF09721 Transmembrane exosortase (Exosortase_EpsH) M301_RS03915 PF04230 Polysaccharide pyruvyl transferase M301_RS03940 PF00535 Glycosyl transferase family 2 M301_RS03950 PF00534 Glycosyl transferases group 1 M301_RS03950 PF13439 Glycosyltransferase Family 4 M301_RS03955 PF13439 Glycosyltransferase Family 4 M301_RS03955 PF00534 Glycosyl transferases group 1 M301_RS03965 PF00245 Alkaline phosphatase M301_RS03985 PF02082 Transcriptional regulator M301_RS03990 PF00175 Oxidoreductase NAD-binding domain M301_RS03990 PF00042 Globin M301_RS03990 PF00970 Oxidoreductase FAD-binding domain M301_RS04015 PF04542 Sigma-70 region 2 M301_RS04015 PF08281 Sigma-70, region 4 M301_RS04020 PF00183 Hsp90 protein M301_RS04025 PF08240 Alcohol dehydrogenase GroES-like domain M301_RS04025 PF00107 Zinc-binding dehydrogenase M301_RS04035 PF00106 short chain dehydrogenase M301_RS04050 PF00163 Ribosomal protein S4/S9 N-terminal domain M301_RS04050 PF01479 S4 domain M301_RS04060 PF00343 Carbohydrate phosphorylase M301_RS04080 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M301_RS04080 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M301_RS04080 PF02769 AIR synthase related protein, C-terminal domain M301_RS04095 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding M301_RS04095 PF10518 TAT (twin-arginine translocation) pathway signal sequence M301_RS04095 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS04100 PF00881 Nitroreductase family M301_RS04115 PF04305 Protein of unknown function (DUF455) M301_RS04120 PF18429 Domain of unknown function (DUF5609) M301_RS04125 PF00549 CoA-ligase M301_RS04125 PF08442 ATP-grasp domain M301_RS04130 PF02629 CoA binding domain M301_RS04130 PF00549 CoA-ligase M301_RS04140 PF02540 NAD synthase M301_RS04140 PF00795 Carbon-nitrogen hydrolase M301_RS04145 PF00543 Nitrogen regulatory protein P-II M301_RS04155 PF00563 EAL domain M301_RS04155 PF00990 Diguanylate cyclase, GGDEF domain M301_RS04155 PF03707 Bacterial signalling protein N terminal repeat M301_RS04175 PF07664 Ferrous iron transport protein B C terminus M301_RS04175 PF02421 Ferrous iron transport protein B M301_RS04175 PF07670 Nucleoside recognition M301_RS04195 PF03795 YCII-related domain M301_RS04200 PF04279 Intracellular septation protein A M301_RS04205 PF02811 PHP domain M301_RS04210 PF01300 Telomere recombination M301_RS04215 PF02163 Peptidase family M50 M301_RS04220 PF00579 tRNA synthetases class I (W and Y) M301_RS04225 PF00893 Small Multidrug Resistance protein M301_RS04230 PF02616 Segregation and condensation protein ScpA M301_RS04235 PF04079 Segregation and condensation complex subunit ScpB M301_RS04240 PF01479 S4 domain M301_RS04240 PF00849 RNA pseudouridylate synthase M301_RS04245 PF05175 Methyltransferase small domain M301_RS04250 PF05175 Methyltransferase small domain M301_RS04255 PF07687 Peptidase dimerisation domain M301_RS04255 PF01546 Peptidase family M20/M25/M40 M301_RS04260 PF03960 ArsC family M301_RS04265 PF03707 Bacterial signalling protein N terminal repeat M301_RS04265 PF00990 Diguanylate cyclase, GGDEF domain M301_RS04265 PF00563 EAL domain M301_RS04270 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS04270 PF14602 Hexapeptide repeat of succinyl-transferase M301_RS04270 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal M301_RS04275 PF07720 Tetratricopeptide repeat M301_RS04275 PF01435 Peptidase family M48 M301_RS04280 PF02705 K+ potassium transporter M301_RS04285 PF00691 OmpA family M301_RS04285 PF00223 Photosystem I psaA/psaB protein M301_RS04300 PF00873 AcrB/AcrD/AcrF family M301_RS04305 PF13533 Biotin-lipoyl like M301_RS04310 PF02321 Outer membrane efflux protein M301_RS04320 PF14552 Tautomerase enzyme M301_RS04330 PF01047 MarR family M301_RS04335 PF00440 Bacterial regulatory proteins, tetR family M301_RS04335 PF16925 Tetracyclin repressor-like, C-terminal domain M301_RS04350 PF00892 EamA-like transporter family M301_RS04355 PF04381 Putative exonuclease, RdgC M301_RS04360 PF01329 Pterin 4 alpha carbinolamine dehydratase M301_RS04365 PF00355 Rieske [2Fe-2S] domain M301_RS04375 PF00510 Cytochrome c oxidase subunit III M301_RS04380 PF00115 Cytochrome C and Quinol oxidase polypeptide I M301_RS04385 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M301_RS04385 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M301_RS04400 PF12852 Cupin M301_RS04400 PF12833 Helix-turn-helix domain M301_RS04410 PF00990 Diguanylate cyclase, GGDEF domain M301_RS04410 PF00563 EAL domain M301_RS04410 PF03707 Bacterial signalling protein N terminal repeat M301_RS04425 PF13426 PAS domain M301_RS04425 PF08447 PAS fold M301_RS04425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS04430 PF01339 CheB methylesterase M301_RS04430 PF01739 CheR methyltransferase, SAM binding domain M301_RS04430 PF03705 CheR methyltransferase, all-alpha domain M301_RS04430 PF08448 PAS fold M301_RS04435 PF00595 PDZ domain M301_RS04435 PF11818 C-terminal domain of tail specific protease (DUF3340) M301_RS04435 PF17804 Tail specific protease N-terminal domain M301_RS04435 PF03572 Peptidase family S41 M301_RS04440 PF03466 LysR substrate binding domain M301_RS04440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS04445 PF02678 Pirin M301_RS04445 PF17954 Quercetinase C-terminal cupin domain M301_RS04450 PF05368 NmrA-like family M301_RS04455 PF00990 Diguanylate cyclase, GGDEF domain M301_RS04455 PF00563 EAL domain M301_RS04455 PF03707 Bacterial signalling protein N terminal repeat M301_RS04460 PF00578 AhpC/TSA family M301_RS04510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS04510 PF02203 Tar ligand binding domain homologue M301_RS04510 PF00672 HAMP domain M301_RS04525 PF00005 ABC transporter M301_RS04525 PF16326 ABC transporter C-terminal domain M301_RS04525 PF12848 ABC transporter M301_RS04530 PF01047 MarR family M301_RS04535 PF00199 Catalase M301_RS04540 PF00580 UvrD/REP helicase N-terminal domain M301_RS04540 PF13361 UvrD-like helicase C-terminal domain M301_RS04550 PF02705 K+ potassium transporter M301_RS04555 PF00072 Response regulator receiver domain M301_RS04555 PF00486 Transcriptional regulatory protein, C terminal M301_RS04560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS04560 PF13493 Domain of unknown function (DUF4118) M301_RS04560 PF00512 His Kinase A (phospho-acceptor) domain M301_RS04560 PF02702 Osmosensitive K+ channel His kinase sensor domain M301_RS04560 PF13492 GAF domain M301_RS04565 PF01926 50S ribosome-binding GTPase M301_RS04575 PF02733 Dak1 domain M301_RS04580 PF02734 DAK2 domain M301_RS04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS04585 PF05231 MASE1 M301_RS04585 PF07730 Histidine kinase M301_RS04590 PF00196 Bacterial regulatory proteins, luxR family M301_RS04590 PF00072 Response regulator receiver domain M301_RS04610 PF00202 Aminotransferase class-III M301_RS04615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M301_RS04615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M301_RS04625 PF00764 Arginosuccinate synthase M301_RS04630 PF08714 Formaldehyde-activating enzyme (Fae) M301_RS04635 PF03705 CheR methyltransferase, all-alpha domain M301_RS04635 PF01739 CheR methyltransferase, SAM binding domain M301_RS04640 PF03975 CheD chemotactic sensory transduction M301_RS04645 PF01339 CheB methylesterase M301_RS04645 PF00072 Response regulator receiver domain M301_RS04650 PF00072 Response regulator receiver domain M301_RS04655 PF04344 Chemotaxis phosphatase, CheZ M301_RS04670 PF00171 Aldehyde dehydrogenase family M301_RS04675 PF00857 Isochorismatase family M301_RS04680 PF00211 Adenylate and Guanylate cyclase catalytic domain M301_RS04690 PF00581 Rhodanese-like domain M301_RS04690 PF17773 UPF0176 acylphosphatase like domain M301_RS04700 PF02741 FTR, proximal lobe M301_RS04700 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase M301_RS04710 PF07969 Amidohydrolase family M301_RS04720 PF00334 Nucleoside diphosphate kinase M301_RS04725 PF04055 Radical SAM superfamily M301_RS04740 PF04551 GcpE protein M301_RS04745 PF13393 Histidyl-tRNA synthetase M301_RS04745 PF03129 Anticodon binding domain M301_RS04750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M301_RS04750 PF00005 ABC transporter M301_RS04755 PF00005 ABC transporter M301_RS04755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M301_RS04760 PF09976 Tetratricopeptide repeat-like domain M301_RS04765 PF13360 PQQ-like domain M301_RS04770 PF01926 50S ribosome-binding GTPase M301_RS04770 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M301_RS04785 PF13525 Outer membrane lipoprotein M301_RS04790 PF00849 RNA pseudouridylate synthase M301_RS04795 PF02578 Multi-copper polyphenol oxidoreductase laccase M301_RS04800 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase M301_RS04810 PF04055 Radical SAM superfamily M301_RS04810 PF18693 TRAM domain M301_RS04810 PF00919 Uncharacterized protein family UPF0004 M301_RS04815 PF01638 HxlR-like helix-turn-helix M301_RS04820 PF03358 NADPH-dependent FMN reductase M301_RS04830 PF08361 MAATS-type transcriptional repressor, C-terminal region M301_RS04830 PF00440 Bacterial regulatory proteins, tetR family M301_RS04835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M301_RS04840 PF00873 AcrB/AcrD/AcrF family M301_RS04845 PF02321 Outer membrane efflux protein M301_RS04855 PF00749 tRNA synthetases class I (E and Q), catalytic domain M301_RS04860 PF17209 Hfq protein M301_RS04865 PF16360 GTP-binding GTPase Middle Region M301_RS04865 PF13167 GTP-binding GTPase N-terminal M301_RS04865 PF01926 50S ribosome-binding GTPase M301_RS04870 PF12221 Bacterial membrane protein N terminal M301_RS04870 PF01145 SPFH domain / Band 7 family M301_RS04875 PF01145 SPFH domain / Band 7 family M301_RS04880 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M301_RS04885 PF13393 Histidyl-tRNA synthetase M301_RS04890 PF00709 Adenylosuccinate synthetase M301_RS04910 PF04476 4-HFC-P synthase M301_RS04915 PF01389 OmpA-like transmembrane domain M301_RS04915 PF00691 OmpA family M301_RS04920 PF01979 Amidohydrolase family M301_RS04930 PF13419 Haloacid dehalogenase-like hydrolase M301_RS04935 PF13662 Toprim domain M301_RS04935 PF02132 RecR protein M301_RS04940 PF02575 YbaB/EbfC DNA-binding family M301_RS04945 PF12170 DNA polymerase III tau subunit V interacting with alpha M301_RS04945 PF12169 DNA polymerase III subunits gamma and tau domain III M301_RS04945 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding M301_RS04950 PF00990 Diguanylate cyclase, GGDEF domain M301_RS04955 PF05231 MASE1 M301_RS04955 PF07730 Histidine kinase M301_RS04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS04960 PF00196 Bacterial regulatory proteins, luxR family M301_RS04960 PF00072 Response regulator receiver domain M301_RS04975 PF00072 Response regulator receiver domain M301_RS04990 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP M301_RS04995 PF07995 Glucose / Sorbosone dehydrogenase M301_RS05035 PF05957 Bacterial protein of unknown function (DUF883) M301_RS05055 PF13396 Phospholipase_D-nuclease N-terminal M301_RS05055 PF13091 PLD-like domain M301_RS05075 PF00216 Bacterial DNA-binding protein M301_RS05100 PF00700 Bacterial flagellin C-terminal helical region M301_RS05100 PF00669 Bacterial flagellin N-terminal helical region M301_RS05105 PF03646 FlaG protein M301_RS05110 PF02465 Flagellar hook-associated protein 2 N-terminus M301_RS05110 PF07195 Flagellar hook-associated protein 2 C-terminus M301_RS05115 PF02561 Flagellar protein FliS M301_RS05130 PF01312 FlhB HrpN YscU SpaS Family M301_RS05135 PF02049 Flagellar hook-basal body complex protein FliE M301_RS05140 PF08345 Flagellar M-ring protein C-terminal M301_RS05140 PF01514 Secretory protein of YscJ/FliF family M301_RS05145 PF14841 FliG middle domain M301_RS05145 PF14842 FliG N-terminal domain M301_RS05145 PF01706 FliG C-terminal domain M301_RS05155 PF18269 T3SS EscN ATPase C-terminal domain M301_RS05155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M301_RS05175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M301_RS05175 PF02154 Flagellar motor switch protein FliM M301_RS05180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M301_RS05180 PF16973 Flagellar motor switch protein FliN N-terminal M301_RS05190 PF00813 FliP family M301_RS05195 PF01313 Bacterial export proteins, family 3 M301_RS05200 PF01311 Bacterial export proteins, family 1 M301_RS05205 PF07317 Flagellar regulator YcgR M301_RS05205 PF07238 PilZ domain M301_RS05215 PF00563 EAL domain M301_RS05215 PF08668 HDOD domain M301_RS05220 PF05971 RNA methyltransferase M301_RS05230 PF00512 His Kinase A (phospho-acceptor) domain M301_RS05230 PF16527 Two-component sensor protein CpxA, periplasmic domain M301_RS05230 PF00672 HAMP domain M301_RS05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS05235 PF00072 Response regulator receiver domain M301_RS05235 PF00486 Transcriptional regulatory protein, C terminal M301_RS05240 PF00970 Oxidoreductase FAD-binding domain M301_RS05240 PF00175 Oxidoreductase NAD-binding domain M301_RS05245 PF01012 Electron transfer flavoprotein domain M301_RS05245 PF00766 Electron transfer flavoprotein FAD-binding domain M301_RS05250 PF01012 Electron transfer flavoprotein domain M301_RS05255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS05255 PF03466 LysR substrate binding domain M301_RS05265 PF07690 Major Facilitator Superfamily M301_RS05270 PF00120 Glutamine synthetase, catalytic domain M301_RS05275 PF00171 Aldehyde dehydrogenase family M301_RS05280 PF00202 Aminotransferase class-III M301_RS05295 PF00121 Triosephosphate isomerase M301_RS05300 PF00171 Aldehyde dehydrogenase family M301_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS05310 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS05315 PF08402 TOBE domain M301_RS05315 PF00005 ABC transporter M301_RS05320 PF13416 Bacterial extracellular solute-binding protein M301_RS05330 PF01037 Lrp/AsnC ligand binding domain M301_RS05335 PF01266 FAD dependent oxidoreductase M301_RS05340 PF00842 Alanine racemase, C-terminal domain M301_RS05340 PF01168 Alanine racemase, N-terminal domain M301_RS05345 PF01042 Endoribonuclease L-PSP M301_RS05350 PF06736 Protein of unknown function (DUF1211) M301_RS05370 PF00202 Aminotransferase class-III M301_RS05375 PF00491 Arginase family M301_RS05380 PF01266 FAD dependent oxidoreductase M301_RS05385 PF00268 Ribonucleotide reductase, small chain M301_RS05390 PF00317 Ribonucleotide reductase, all-alpha domain M301_RS05390 PF02867 Ribonucleotide reductase, barrel domain M301_RS05390 PF03477 ATP cone domain M301_RS05395 PF08267 Cobalamin-independent synthase, N-terminal domain M301_RS05395 PF01717 Cobalamin-independent synthase, Catalytic domain M301_RS05400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS05400 PF03466 LysR substrate binding domain M301_RS05410 PF00583 Acetyltransferase (GNAT) family M301_RS05415 PF02321 Outer membrane efflux protein M301_RS05420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M301_RS05425 PF12704 MacB-like periplasmic core domain M301_RS05425 PF02687 FtsX-like permease family M301_RS05425 PF00005 ABC transporter M301_RS05430 PF12704 MacB-like periplasmic core domain M301_RS05430 PF02687 FtsX-like permease family M301_RS05430 PF00005 ABC transporter M301_RS05440 PF00392 Bacterial regulatory proteins, gntR family M301_RS05440 PF00155 Aminotransferase class I and II M301_RS05450 PF00120 Glutamine synthetase, catalytic domain M301_RS05455 PF00202 Aminotransferase class-III M301_RS05460 PF13416 Bacterial extracellular solute-binding protein M301_RS05465 PF08402 TOBE domain M301_RS05465 PF00005 ABC transporter M301_RS05470 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS05475 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS05480 PF00171 Aldehyde dehydrogenase family M301_RS05485 PF00171 Aldehyde dehydrogenase family M301_RS05490 PF00202 Aminotransferase class-III M301_RS05495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M301_RS05495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M301_RS05495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M301_RS05495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M301_RS05510 PF04384 Iron-sulphur cluster assembly M301_RS05515 PF00464 Serine hydroxymethyltransferase M301_RS05520 PF03477 ATP cone domain M301_RS05530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M301_RS05530 PF01872 RibD C-terminal domain M301_RS05535 PF01026 TatD related DNase M301_RS05540 PF01008 Initiation factor 2 subunit family M301_RS05545 PF00596 Class II Aldolase and Adducin N-terminal domain M301_RS05550 PF00117 Glutamine amidotransferase class-I M301_RS05550 PF06418 CTP synthase N-terminus M301_RS05555 PF03952 Enolase, N-terminal domain M301_RS05555 PF00113 Enolase, C-terminal TIM barrel domain M301_RS05560 PF04977 Septum formation initiator M301_RS05565 PF01571 Aminomethyltransferase folate-binding domain M301_RS05600 PF07726 ATPase family associated with various cellular activities (AAA) M301_RS05600 PF17863 AAA lid domain M301_RS05605 PF07977 FabA-like domain M301_RS05610 PF02801 Beta-ketoacyl synthase, C-terminal domain M301_RS05610 PF00109 Beta-ketoacyl synthase, N-terminal domain M301_RS05620 PF04430 Protein of unknown function (DUF498/DUF598) M301_RS05625 PF00155 Aminotransferase class I and II M301_RS05635 PF03447 Homoserine dehydrogenase, NAD binding domain M301_RS05635 PF00742 Homoserine dehydrogenase M301_RS05635 PF01842 ACT domain M301_RS05640 PF00291 Pyridoxal-phosphate dependent enzyme M301_RS05640 PF14821 Threonine synthase N terminus M301_RS05645 PF00303 Thymidylate synthase M301_RS05660 PF00158 Sigma-54 interaction domain M301_RS05660 PF00072 Response regulator receiver domain M301_RS05670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS05670 PF00512 His Kinase A (phospho-acceptor) domain M301_RS05675 PF00186 Dihydrofolate reductase M301_RS05680 PF01276 Orn/Lys/Arg decarboxylase, major domain M301_RS05680 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M301_RS05680 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M301_RS05685 PF00692 dUTPase M301_RS05695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M301_RS05695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M301_RS05700 PF01738 Dienelactone hydrolase family M301_RS05705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M301_RS05720 PF00270 DEAD/DEAH box helicase M301_RS05720 PF00271 Helicase conserved C-terminal domain M301_RS05725 PF00271 Helicase conserved C-terminal domain M301_RS05725 PF00270 DEAD/DEAH box helicase M301_RS05730 PF03144 Elongation factor Tu domain 2 M301_RS05730 PF00679 Elongation factor G C-terminus M301_RS05730 PF00009 Elongation factor Tu GTP binding domain M301_RS05745 PF00037 4Fe-4S binding domain M301_RS05745 PF12798 4Fe-4S binding domain M301_RS05750 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M301_RS05755 PF02264 LamB porin M301_RS05760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M301_RS05760 PF02378 Phosphotransferase system, EIIC M301_RS05765 PF00294 pfkB family carbohydrate kinase M301_RS05770 PF05524 PEP-utilising enzyme, N-terminal M301_RS05770 PF00391 PEP-utilising enzyme, mobile domain M301_RS05770 PF02896 PEP-utilising enzyme, TIM barrel domain M301_RS05770 PF00381 PTS HPr component phosphorylation site M301_RS05770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M301_RS05775 PF00455 DeoR C terminal sensor domain M301_RS05775 PF08220 DeoR-like helix-turn-helix domain M301_RS05785 PF12848 ABC transporter M301_RS05785 PF00005 ABC transporter M301_RS05790 PF00881 Nitroreductase family M301_RS05795 PF03449 Transcription elongation factor, N-terminal M301_RS05795 PF01272 Transcription elongation factor, GreA/GreB, C-term M301_RS05800 PF00117 Glutamine amidotransferase class-I M301_RS05800 PF02540 NAD synthase M301_RS05800 PF00958 GMP synthase C terminal domain M301_RS05805 PF00571 CBS domain M301_RS05805 PF00478 IMP dehydrogenase / GMP reductase domain M301_RS05810 PF00392 Bacterial regulatory proteins, gntR family M301_RS05810 PF07702 UTRA domain M301_RS05820 PF03658 RnfH family Ubiquitin M301_RS05825 PF03364 Polyketide cyclase / dehydrase and lipid transport M301_RS05830 PF01668 SmpB protein M301_RS05840 PF01389 OmpA-like transmembrane domain M301_RS05840 PF00691 OmpA family M301_RS05850 PF09382 RQC domain M301_RS05850 PF00271 Helicase conserved C-terminal domain M301_RS05850 PF00270 DEAD/DEAH box helicase M301_RS05850 PF16124 RecQ zinc-binding M301_RS05850 PF00570 HRDC domain M301_RS05855 PF00990 Diguanylate cyclase, GGDEF domain M301_RS05855 PF00360 Phytochrome region M301_RS05855 PF00563 EAL domain M301_RS05855 PF01590 GAF domain M301_RS05860 PF00589 Phage integrase family M301_RS05860 PF13356 Arm DNA-binding domain M301_RS05915 PF00881 Nitroreductase family M301_RS05940 PF04321 RmlD substrate binding domain M301_RS05945 PF00483 Nucleotidyl transferase M301_RS05950 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M301_RS05955 PF06865 Pyrimidine/purine nucleoside phosphorylase M301_RS05960 PF04461 Protein of unknown function (DUF520) M301_RS05965 PF00330 Aconitase family (aconitate hydratase) M301_RS05975 PF00694 Aconitase C-terminal domain M301_RS05980 PF00180 Isocitrate/isopropylmalate dehydrogenase M301_RS05985 PF01118 Semialdehyde dehydrogenase, NAD binding domain M301_RS05985 PF02774 Semialdehyde dehydrogenase, dimerisation domain M301_RS06000 PF01416 tRNA pseudouridine synthase M301_RS06005 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M301_RS06010 PF00291 Pyridoxal-phosphate dependent enzyme M301_RS06015 PF00290 Tryptophan synthase alpha chain M301_RS06020 PF01039 Carboxyl transferase domain M301_RS06020 PF17848 Acetyl-coA carboxylase zinc finger domain M301_RS06025 PF02875 Mur ligase family, glutamate ligase domain M301_RS06025 PF08245 Mur ligase middle domain M301_RS06035 PF02674 Colicin V production protein M301_RS06040 PF00156 Phosphoribosyl transferase domain M301_RS06045 PF01053 Cys/Met metabolism PLP-dependent enzyme M301_RS06050 PF00521 DNA gyrase/topoisomerase IV, subunit A M301_RS06050 PF03989 DNA gyrase C-terminal domain, beta-propeller M301_RS06055 PF00266 Aminotransferase class-V M301_RS06060 PF01842 ACT domain M301_RS06060 PF01817 Chorismate mutase type II M301_RS06060 PF00800 Prephenate dehydratase M301_RS06065 PF00155 Aminotransferase class I and II M301_RS06070 PF00793 DAHP synthetase I family M301_RS06075 PF12706 Beta-lactamase superfamily domain M301_RS06080 PF03070 TENA/THI-4/PQQC family M301_RS06085 PF05402 Coenzyme PQQ synthesis protein D (PqqD) M301_RS06090 PF13186 Iron-sulfur cluster-binding domain M301_RS06090 PF04055 Radical SAM superfamily M301_RS06095 PF07690 Major Facilitator Superfamily M301_RS06100 PF01863 Protein of unknown function DUF45 M301_RS06110 PF11953 Domain of unknown function (DUF3470) M301_RS06110 PF00037 4Fe-4S binding domain M301_RS06115 PF00009 Elongation factor Tu GTP binding domain M301_RS06120 PF01507 Phosphoadenosine phosphosulfate reductase family M301_RS06125 PF01507 Phosphoadenosine phosphosulfate reductase family M301_RS06135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M301_RS06135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M301_RS06140 PF01925 Sulfite exporter TauE/SafE M301_RS06145 PF03466 LysR substrate binding domain M301_RS06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS06155 PF13360 PQQ-like domain M301_RS06160 PF02954 Bacterial regulatory protein, Fis family M301_RS06160 PF00158 Sigma-54 interaction domain M301_RS06160 PF01590 GAF domain M301_RS06185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS06185 PF00672 HAMP domain M301_RS06185 PF02203 Tar ligand binding domain homologue M301_RS06195 PF05872 Bacterial protein of unknown function (DUF853) M301_RS06200 PF01268 Formate--tetrahydrofolate ligase M301_RS06205 PF01205 Uncharacterized protein family UPF0029 M301_RS06205 PF09186 Domain of unknown function (DUF1949) M301_RS06220 PF07720 Tetratricopeptide repeat M301_RS06220 PF01435 Peptidase family M48 M301_RS06240 PF02646 RmuC family M301_RS06245 PF02597 ThiS family M301_RS06250 PF02391 MoaE protein M301_RS06255 PF05362 Lon protease (S16) C-terminal proteolytic domain M301_RS06255 PF13654 AAA domain M301_RS06260 PF01479 S4 domain M301_RS06265 PF01040 UbiA prenyltransferase family M301_RS06270 PF04030 D-arabinono-1,4-lactone oxidase M301_RS06270 PF01565 FAD binding domain M301_RS06275 PF00106 short chain dehydrogenase M301_RS06290 PF14667 Polysaccharide biosynthesis C-terminal domain M301_RS06290 PF01943 Polysaccharide biosynthesis protein M301_RS06300 PF00535 Glycosyl transferase family 2 M301_RS06310 PF00535 Glycosyl transferase family 2 M301_RS06315 PF01370 NAD dependent epimerase/dehydratase family M301_RS06320 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS06320 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M301_RS06350 PF00005 ABC transporter M301_RS06365 PF01695 IstB-like ATP binding protein M301_RS06390 PF01370 NAD dependent epimerase/dehydratase family M301_RS06395 PF02397 Bacterial sugar transferase M301_RS06400 PF02719 Polysaccharide biosynthesis protein M301_RS06405 PF00156 Phosphoribosyl transferase domain M301_RS06410 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M301_RS06410 PF13360 PQQ-like domain M301_RS06415 PF04193 PQ loop repeat M301_RS06420 PF00313 'Cold-shock' DNA-binding domain M301_RS06425 PF01176 Translation initiation factor 1A / IF-1 M301_RS06430 PF00072 Response regulator receiver domain M301_RS06430 PF00196 Bacterial regulatory proteins, luxR family M301_RS06445 PF00773 RNB domain M301_RS06445 PF08206 Ribonuclease B OB domain M301_RS06445 PF00575 S1 RNA binding domain M301_RS06445 PF17876 Cold shock domain M301_RS06445 PF08461 Ribonuclease R winged-helix domain M301_RS06450 PF00588 SpoU rRNA Methylase family M301_RS06450 PF08032 RNA 2'-O ribose methyltransferase substrate binding M301_RS06455 PF06039 Malate:quinone oxidoreductase (Mqo) M301_RS06465 PF01471 Putative peptidoglycan binding domain M301_RS06465 PF13401 AAA domain M301_RS06470 PF00263 Bacterial type II and III secretion system protein M301_RS06470 PF03958 Bacterial type II/III secretion system short domain M301_RS06515 PF14245 Type IV pilin PilA M301_RS06515 PF07963 Prokaryotic N-terminal methylation motif M301_RS06535 PF00482 Type II secretion system (T2SS), protein F M301_RS06540 PF00437 Type II/IV secretion system protein M301_RS06540 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M301_RS06550 PF12843 Putative quorum-sensing-regulated virulence factor M301_RS06555 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS06560 PF00005 ABC transporter M301_RS06560 PF00571 CBS domain M301_RS06565 PF00175 Oxidoreductase NAD-binding domain M301_RS06565 PF00970 Oxidoreductase FAD-binding domain M301_RS06565 PF00111 2Fe-2S iron-sulfur cluster binding domain M301_RS06570 PF00848 Ring hydroxylating alpha subunit (catalytic domain) M301_RS06570 PF00355 Rieske [2Fe-2S] domain M301_RS06580 PF00766 Electron transfer flavoprotein FAD-binding domain M301_RS06580 PF01012 Electron transfer flavoprotein domain M301_RS06585 PF13183 4Fe-4S dicluster domain M301_RS06585 PF02754 Cysteine-rich domain M301_RS06590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M301_RS06600 PF00464 Serine hydroxymethyltransferase M301_RS06605 PF03313 Serine dehydratase alpha chain M301_RS06605 PF03315 Serine dehydratase beta chain M301_RS06615 PF17806 Sarcosine oxidase A3 domain M301_RS06615 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS06615 PF08669 Glycine cleavage T-protein C-terminal barrel domain M301_RS06615 PF01571 Aminomethyltransferase folate-binding domain M301_RS06620 PF04267 Sarcosine oxidase, delta subunit family M301_RS06625 PF01266 FAD dependent oxidoreductase M301_RS06635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M301_RS06640 PF01965 DJ-1/PfpI family M301_RS06640 PF12833 Helix-turn-helix domain M301_RS06650 PF00171 Aldehyde dehydrogenase family M301_RS06655 PF00732 GMC oxidoreductase M301_RS06655 PF05199 GMC oxidoreductase M301_RS06660 PF03458 UPF0126 domain M301_RS06670 PF08335 GlnD PII-uridylyltransferase M301_RS06670 PF01966 HD domain M301_RS06675 PF00557 Metallopeptidase family M24 M301_RS06685 PF00318 Ribosomal protein S2 M301_RS06690 PF00889 Elongation factor TS M301_RS06695 PF00696 Amino acid kinase family M301_RS06700 PF01765 Ribosome recycling factor M301_RS06705 PF01255 Putative undecaprenyl diphosphate synthase M301_RS06715 PF13288 DXP reductoisomerase C-terminal domain M301_RS06715 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M301_RS06715 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M301_RS06720 PF02163 Peptidase family M50 M301_RS06720 PF17820 PDZ domain M301_RS06725 PF07244 Surface antigen variable number repeat M301_RS06725 PF01103 Surface antigen M301_RS06735 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS06735 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M301_RS06740 PF07977 FabA-like domain M301_RS06745 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M301_RS06745 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS06750 PF02684 Lipid-A-disaccharide synthetase M301_RS06755 PF01351 Ribonuclease HII M301_RS06760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M301_RS06770 PF02545 Maf-like protein M301_RS06775 PF02436 Conserved carboxylase domain M301_RS06775 PF00364 Biotin-requiring enzyme M301_RS06775 PF00682 HMGL-like M301_RS06780 PF02785 Biotin carboxylase C-terminal domain M301_RS06780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS06780 PF00289 Biotin carboxylase, N-terminal domain M301_RS06785 PF02620 Large ribosomal RNA subunit accumulation protein YceD M301_RS06790 PF01783 Ribosomal L32p protein family M301_RS06795 PF02504 Fatty acid synthesis protein M301_RS06800 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M301_RS06800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M301_RS06805 PF00698 Acyl transferase domain M301_RS06815 PF00550 Phosphopantetheine attachment site M301_RS06820 PF00109 Beta-ketoacyl synthase, N-terminal domain M301_RS06820 PF02801 Beta-ketoacyl synthase, C-terminal domain M301_RS06825 PF01063 Amino-transferase class IV M301_RS06830 PF02618 YceG-like family M301_RS06835 PF02223 Thymidylate kinase M301_RS06840 PF08714 Formaldehyde-activating enzyme (Fae) M301_RS06845 PF00582 Universal stress protein family M301_RS06850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M301_RS06850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M301_RS06860 PF03006 Haemolysin-III related M301_RS06865 PF09115 DNA polymerase III, delta subunit, C terminal M301_RS06875 PF01026 TatD related DNase M301_RS06880 PF03099 Biotin/lipoate A/B protein ligase family M301_RS06880 PF12706 Beta-lactamase superfamily domain M301_RS06905 PF03069 Acetamidase/Formamidase family M301_RS06910 PF09723 Zinc ribbon domain M301_RS06930 PF00005 ABC transporter M301_RS06930 PF12399 Branched-chain amino acid ATP-binding cassette transporter M301_RS06935 PF00005 ABC transporter M301_RS06940 PF01774 UreD urease accessory protein M301_RS06945 PF00547 Urease, gamma subunit M301_RS06950 PF00699 Urease beta subunit M301_RS06955 PF01979 Amidohydrolase family M301_RS06955 PF00449 Urease alpha-subunit, N-terminal domain M301_RS06960 PF05194 UreE urease accessory protein, C-terminal domain M301_RS06960 PF02814 UreE urease accessory protein, N-terminal domain M301_RS06965 PF01730 UreF M301_RS06970 PF02492 CobW/HypB/UreG, nucleotide-binding domain M301_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS06980 PF00512 His Kinase A (phospho-acceptor) domain M301_RS06980 PF01627 Hpt domain M301_RS06980 PF00072 Response regulator receiver domain M301_RS06985 PF00072 Response regulator receiver domain M301_RS06990 PF02824 TGS domain M301_RS06990 PF04607 Region found in RelA / SpoT proteins M301_RS06990 PF13291 ACT domain M301_RS07000 PF01794 Ferric reductase like transmembrane component M301_RS07005 PF00174 Oxidoreductase molybdopterin binding domain M301_RS07015 PF00459 Inositol monophosphatase family M301_RS07020 PF12826 Helix-hairpin-helix motif M301_RS07020 PF03120 NAD-dependent DNA ligase OB-fold domain M301_RS07020 PF00533 BRCA1 C Terminus (BRCT) domain M301_RS07020 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M301_RS07020 PF01653 NAD-dependent DNA ligase adenylation domain M301_RS07030 PF06470 SMC proteins Flexible Hinge Domain M301_RS07030 PF02463 RecF/RecN/SMC N terminal domain M301_RS07035 PF14489 QueF-like protein M301_RS07050 PF00665 Integrase core domain M301_RS07055 PF01695 IstB-like ATP binding protein M301_RS07070 PF01327 Polypeptide deformylase M301_RS07075 PF01048 Phosphorylase superfamily M301_RS07085 PF00072 Response regulator receiver domain M301_RS07085 PF00196 Bacterial regulatory proteins, luxR family M301_RS07090 PF00672 HAMP domain M301_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS07090 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M301_RS07090 PF07730 Histidine kinase M301_RS07105 PF00970 Oxidoreductase FAD-binding domain M301_RS07105 PF00111 2Fe-2S iron-sulfur cluster binding domain M301_RS07105 PF00175 Oxidoreductase NAD-binding domain M301_RS07115 PF01571 Aminomethyltransferase folate-binding domain M301_RS07115 PF08669 Glycine cleavage T-protein C-terminal barrel domain M301_RS07120 PF01012 Electron transfer flavoprotein domain M301_RS07120 PF00766 Electron transfer flavoprotein FAD-binding domain M301_RS07125 PF01012 Electron transfer flavoprotein domain M301_RS07135 PF02665 Nitrate reductase gamma subunit M301_RS07135 PF02754 Cysteine-rich domain M301_RS07135 PF13183 4Fe-4S dicluster domain M301_RS07140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M301_RS07140 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS07165 PF00925 GTP cyclohydrolase II M301_RS07165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M301_RS07170 PF02649 Type I GTP cyclohydrolase folE2 M301_RS07185 PF13520 Amino acid permease M301_RS07205 PF01645 Conserved region in glutamate synthase M301_RS07220 PF00120 Glutamine synthetase, catalytic domain M301_RS07230 PF08669 Glycine cleavage T-protein C-terminal barrel domain M301_RS07230 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS07230 PF17806 Sarcosine oxidase A3 domain M301_RS07230 PF01571 Aminomethyltransferase folate-binding domain M301_RS07240 PF01266 FAD dependent oxidoreductase M301_RS07250 PF08714 Formaldehyde-activating enzyme (Fae) M301_RS07285 PF18073 Rubredoxin metal binding domain M301_RS07290 PF03796 DnaB-like helicase C terminal domain M301_RS07290 PF00772 DnaB-like helicase N terminal domain M301_RS07295 PF01281 Ribosomal protein L9, N-terminal domain M301_RS07295 PF03948 Ribosomal protein L9, C-terminal domain M301_RS07300 PF01084 Ribosomal protein S18 M301_RS07310 PF01250 Ribosomal protein S6 M301_RS07320 PF00271 Helicase conserved C-terminal domain M301_RS07320 PF04851 Type III restriction enzyme, res subunit M301_RS07320 PF02151 UvrB/uvrC motif M301_RS07320 PF12344 Ultra-violet resistance protein B M301_RS07320 PF17757 UvrB interaction domain M301_RS07330 PF00155 Aminotransferase class I and II M301_RS07345 PF01556 DnaJ C terminal domain M301_RS07345 PF00226 DnaJ domain M301_RS07345 PF00684 DnaJ central domain M301_RS07365 PF01569 PAP2 superfamily M301_RS07380 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M301_RS07385 PF18818 Metallopeptidase superfamily domain M301_RS07385 PF13362 Toprim domain M301_RS07385 PF08401 Domain of unknown function (DUF1738) M301_RS07400 PF00975 Thioesterase domain M301_RS07400 PF00550 Phosphopantetheine attachment site M301_RS07400 PF00668 Condensation domain M301_RS07400 PF13193 AMP-binding enzyme C-terminal domain M301_RS07400 PF00501 AMP-binding enzyme M301_RS07405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS07405 PF08245 Mur ligase middle domain M301_RS07405 PF02875 Mur ligase family, glutamate ligase domain M301_RS07410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS07410 PF08245 Mur ligase middle domain M301_RS07410 PF02875 Mur ligase family, glutamate ligase domain M301_RS07415 PF00005 ABC transporter M301_RS07415 PF00664 ABC transporter transmembrane region M301_RS07425 PF09905 DNA-binding protein VF530 M301_RS07445 PF00873 AcrB/AcrD/AcrF family M301_RS07450 PF00563 EAL domain M301_RS07450 PF00990 Diguanylate cyclase, GGDEF domain M301_RS07450 PF03707 Bacterial signalling protein N terminal repeat M301_RS07460 PF00593 TonB dependent receptor M301_RS07460 PF07715 TonB-dependent Receptor Plug Domain M301_RS07470 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding M301_RS07470 PF18381 YcaO cyclodehydratase C-terminal domain M301_RS07485 PF00561 alpha/beta hydrolase fold M301_RS07510 PF08212 Lipocalin-like domain M301_RS07540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M301_RS07540 PF01266 FAD dependent oxidoreductase M301_RS07545 PF01266 FAD dependent oxidoreductase M301_RS07545 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M301_RS07555 PF00437 Type II/IV secretion system protein M301_RS07560 PF00892 EamA-like transporter family M301_RS07565 PF00155 Aminotransferase class I and II M301_RS07580 PF01119 DNA mismatch repair protein, C-terminal domain M301_RS07580 PF08676 MutL C terminal dimerisation domain M301_RS07585 PF00672 HAMP domain M301_RS07585 PF16591 Helical bimodular sensor domain M301_RS07585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS07595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M301_RS07595 PF00753 Metallo-beta-lactamase superfamily M301_RS07595 PF10996 Beta-Casp domain M301_RS07600 PF11741 AMIN domain M301_RS07600 PF01520 N-acetylmuramoyl-L-alanine amidase M301_RS07605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M301_RS07610 PF08331 Domain of unknown function (DUF1730) M301_RS07615 PF03707 Bacterial signalling protein N terminal repeat M301_RS07615 PF00990 Diguanylate cyclase, GGDEF domain M301_RS07615 PF00563 EAL domain M301_RS07625 PF00480 ROK family M301_RS07630 PF02446 4-alpha-glucanotransferase M301_RS07640 PF00483 Nucleotidyl transferase M301_RS07645 PF00128 Alpha amylase, catalytic domain M301_RS07645 PF02806 Alpha amylase, C-terminal all-beta domain M301_RS07645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) M301_RS07650 PF00342 Phosphoglucose isomerase M301_RS07655 PF03976 Polyphosphate kinase 2 (PPK2) M301_RS07665 PF00990 Diguanylate cyclase, GGDEF domain M301_RS07665 PF17156 Gammaproteobacterial periplasmic sensor domain M301_RS07670 PF01343 Peptidase family S49 M301_RS07670 PF06965 Na+/H+ antiporter 1 M301_RS07680 PF13419 Haloacid dehalogenase-like hydrolase M301_RS07685 PF00849 RNA pseudouridylate synthase M301_RS07685 PF01479 S4 domain M301_RS07690 PF00575 S1 RNA binding domain M301_RS07690 PF12111 Polyribonucleotide phosphorylase C terminal M301_RS07690 PF10150 Ribonuclease E/G family M301_RS07695 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M301_RS07700 PF08323 Starch synthase catalytic domain M301_RS07700 PF00534 Glycosyl transferases group 1 M301_RS07705 PF00929 Exonuclease M301_RS07710 PF01435 Peptidase family M48 M301_RS07710 PF16491 CAAX prenyl protease N-terminal, five membrane helices M301_RS07720 PF03193 RsgA GTPase M301_RS07725 PF01966 HD domain M301_RS07725 PF11871 Domain of unknown function (DUF3391) M301_RS07730 PF00563 EAL domain M301_RS07730 PF01590 GAF domain M301_RS07730 PF00990 Diguanylate cyclase, GGDEF domain M301_RS07730 PF00989 PAS fold M301_RS07735 PF01242 6-pyruvoyl tetrahydropterin synthase M301_RS07740 PF16363 GDP-mannose 4,6 dehydratase M301_RS07745 PF00929 Exonuclease M301_RS07750 PF00075 RNase H M301_RS07755 PF08241 Methyltransferase domain M301_RS07760 PF16123 Hydroxyacylglutathione hydrolase C-terminus M301_RS07760 PF00753 Metallo-beta-lactamase superfamily M301_RS07765 PF01464 Transglycosylase SLT domain M301_RS07765 PF01476 LysM domain M301_RS07770 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M301_RS07775 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS07780 PF12911 N-terminal TM domain of oligopeptide transport permease C M301_RS07780 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS07805 PF00216 Bacterial DNA-binding protein M301_RS07810 PF00004 ATPase family associated with various cellular activities (AAA) M301_RS07810 PF05362 Lon protease (S16) C-terminal proteolytic domain M301_RS07810 PF02190 ATP-dependent protease La (LON) substrate-binding domain M301_RS07815 PF10431 C-terminal, D2-small domain, of ClpB protein M301_RS07815 PF07724 AAA domain (Cdc48 subfamily) M301_RS07815 PF06689 ClpX C4-type zinc finger M301_RS07820 PF00574 Clp protease M301_RS07825 PF05697 Bacterial trigger factor protein (TF) M301_RS07825 PF05698 Bacterial trigger factor protein (TF) C-terminus M301_RS07855 PF00873 AcrB/AcrD/AcrF family M301_RS07860 PF01329 Pterin 4 alpha carbinolamine dehydratase M301_RS07870 PF04715 Anthranilate synthase component I, N terminal region M301_RS07870 PF00425 chorismate binding enzyme M301_RS07885 PF00977 Histidine biosynthesis protein M301_RS07890 PF01380 SIS domain M301_RS07895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M301_RS07900 PF00923 Transaldolase/Fructose-6-phosphate aldolase M301_RS07905 PF00672 HAMP domain M301_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS07905 PF00512 His Kinase A (phospho-acceptor) domain M301_RS07915 PF00486 Transcriptional regulatory protein, C terminal M301_RS07915 PF00072 Response regulator receiver domain M301_RS07925 PF08443 RimK-like ATP-grasp domain M301_RS07925 PF18030 RimK PreATP-grasp domain M301_RS07930 PF02289 Cyclohydrolase (MCH) M301_RS07935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS07935 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M301_RS07935 PF02142 MGS-like domain M301_RS07940 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal M301_RS07950 PF02896 PEP-utilising enzyme, TIM barrel domain M301_RS07950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M301_RS07950 PF00391 PEP-utilising enzyme, mobile domain M301_RS07955 PF03618 Kinase/pyrophosphorylase M301_RS07960 PF00255 Glutathione peroxidase M301_RS07975 PF03449 Transcription elongation factor, N-terminal M301_RS07975 PF01272 Transcription elongation factor, GreA/GreB, C-term M301_RS07985 PF08207 Elongation factor P (EF-P) KOW-like domain M301_RS07985 PF09285 Elongation factor P, C-terminal M301_RS07985 PF01132 Elongation factor P (EF-P) OB domain M301_RS07990 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M301_RS07995 PF01464 Transglycosylase SLT domain M301_RS07995 PF00497 Bacterial extracellular solute-binding proteins, family 3 M301_RS08000 PF02403 Seryl-tRNA synthetase N-terminal domain M301_RS08000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M301_RS08005 PF16193 AAA C-terminal domain M301_RS08005 PF00004 ATPase family associated with various cellular activities (AAA) M301_RS08005 PF12002 MgsA AAA+ ATPase C terminal M301_RS08010 PF03548 Outer membrane lipoprotein carrier protein LolA M301_RS08015 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M301_RS08015 PF01580 FtsK/SpoIIIE family M301_RS08015 PF17854 FtsK alpha domain M301_RS08015 PF09397 Ftsk gamma domain M301_RS08020 PF00210 Ferritin-like domain M301_RS08025 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS08030 PF01713 Smr domain M301_RS08050 PF00005 ABC transporter M301_RS08050 PF00664 ABC transporter transmembrane region M301_RS08055 PF02542 YgbB family M301_RS08060 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M301_RS08065 PF00196 Bacterial regulatory proteins, luxR family M301_RS08070 PF00909 Ammonium Transporter Family M301_RS08100 PF01430 Hsp33 protein M301_RS08110 PF08032 RNA 2'-O ribose methyltransferase substrate binding M301_RS08110 PF00588 SpoU rRNA Methylase family M301_RS08115 PF00230 Major intrinsic protein M301_RS08120 PF00849 RNA pseudouridylate synthase M301_RS08120 PF01479 S4 domain M301_RS08130 PF08212 Lipocalin-like domain M301_RS08135 PF00990 Diguanylate cyclase, GGDEF domain M301_RS08135 PF03707 Bacterial signalling protein N terminal repeat M301_RS08135 PF00563 EAL domain M301_RS08155 PF00909 Ammonium Transporter Family M301_RS08170 PF08497 Radical SAM N-terminal M301_RS08170 PF11842 Domain of unknown function (DUF3362) M301_RS08170 PF04055 Radical SAM superfamily M301_RS08180 PF07731 Multicopper oxidase M301_RS08180 PF00394 Multicopper oxidase M301_RS08180 PF07732 Multicopper oxidase M301_RS08195 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M301_RS08200 PF04376 Arginine-tRNA-protein transferase, N terminus M301_RS08200 PF04377 Arginine-tRNA-protein transferase, C terminus M301_RS08220 PF02153 Prephenate dehydrogenase M301_RS08225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M301_RS08230 PF02224 Cytidylate kinase M301_RS08235 PF00575 S1 RNA binding domain M301_RS08240 PF00216 Bacterial DNA-binding protein M301_RS08245 PF18073 Rubredoxin metal binding domain M301_RS08250 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M301_RS08270 PF01588 Putative tRNA binding domain M301_RS08270 PF09334 tRNA synthetases class I (M) M301_RS08275 PF10609 NUBPL iron-transfer P-loop NTPase M301_RS08280 PF01152 Bacterial-like globin M301_RS08285 PF01370 NAD dependent epimerase/dehydratase family M301_RS08285 PF02222 ATP-grasp domain M301_RS08290 PF02954 Bacterial regulatory protein, Fis family M301_RS08290 PF00158 Sigma-54 interaction domain M301_RS08290 PF00072 Response regulator receiver domain M301_RS08305 PF00005 ABC transporter M301_RS08310 PF13472 GDSL-like Lipase/Acylhydrolase family M301_RS08315 PF08501 Shikimate dehydrogenase substrate binding domain M301_RS08320 PF01171 PP-loop family M301_RS08320 PF09179 TilS substrate binding domain M301_RS08320 PF11734 TilS substrate C-terminal domain M301_RS08325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M301_RS08330 PF07733 Bacterial DNA polymerase III alpha NTPase domain M301_RS08330 PF01336 OB-fold nucleic acid binding domain M301_RS08330 PF02811 PHP domain M301_RS08330 PF14579 Helix-hairpin-helix motif M301_RS08330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M301_RS08335 PF01584 CheW-like domain M301_RS08335 PF01627 Hpt domain M301_RS08335 PF02895 Signal transducing histidine kinase, homodimeric domain M301_RS08335 PF00072 Response regulator receiver domain M301_RS08335 PF00072 Response regulator receiver domain M301_RS08335 PF01627 Hpt domain M301_RS08335 PF01584 CheW-like domain M301_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS08335 PF02895 Signal transducing histidine kinase, homodimeric domain M301_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS08340 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term M301_RS08340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS08350 PF00072 Response regulator receiver domain M301_RS08355 PF00072 Response regulator receiver domain M301_RS08365 PF08534 Redoxin M301_RS08380 PF01170 Putative RNA methylase family UPF0020 M301_RS08380 PF02926 THUMP domain M301_RS08390 PF00773 RNB domain M301_RS08395 PF02492 CobW/HypB/UreG, nucleotide-binding domain M301_RS08395 PF07683 Cobalamin synthesis protein cobW C-terminal domain M301_RS08400 PF00392 Bacterial regulatory proteins, gntR family M301_RS08400 PF00155 Aminotransferase class I and II M301_RS08405 PF12801 4Fe-4S binding domain M301_RS08405 PF13746 4Fe-4S dicluster domain M301_RS08405 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M301_RS08410 PF00155 Aminotransferase class I and II M301_RS08415 PF03781 Sulfatase-modifying factor enzyme 1 M301_RS08415 PF12867 DinB superfamily M301_RS08420 PF01641 SelR domain M301_RS08425 PF00850 Histone deacetylase domain M301_RS08430 PF13607 Succinyl-CoA ligase like flavodoxin domain M301_RS08430 PF00583 Acetyltransferase (GNAT) family M301_RS08430 PF13380 CoA binding domain M301_RS08440 PF00270 DEAD/DEAH box helicase M301_RS08440 PF11898 Domain of unknown function (DUF3418) M301_RS08440 PF04408 Helicase associated domain (HA2) M301_RS08440 PF00271 Helicase conserved C-terminal domain M301_RS08440 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M301_RS08450 PF03710 Glutamate-ammonia ligase adenylyltransferase M301_RS08450 PF08335 GlnD PII-uridylyltransferase M301_RS08455 PF00501 AMP-binding enzyme M301_RS08455 PF16177 Acetyl-coenzyme A synthetase N-terminus M301_RS08455 PF13193 AMP-binding enzyme C-terminal domain M301_RS08460 PF13360 PQQ-like domain M301_RS08475 PF00512 His Kinase A (phospho-acceptor) domain M301_RS08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS08475 PF00989 PAS fold M301_RS08480 PF00072 Response regulator receiver domain M301_RS08480 PF00196 Bacterial regulatory proteins, luxR family M301_RS08485 PF16658 Class II release factor RF3, C-terminal domain M301_RS08485 PF00009 Elongation factor Tu GTP binding domain M301_RS08485 PF03144 Elongation factor Tu domain 2 M301_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS08495 PF16527 Two-component sensor protein CpxA, periplasmic domain M301_RS08495 PF00672 HAMP domain M301_RS08495 PF00512 His Kinase A (phospho-acceptor) domain M301_RS08500 PF00072 Response regulator receiver domain M301_RS08500 PF00486 Transcriptional regulatory protein, C terminal M301_RS08515 PF12848 ABC transporter M301_RS08515 PF00005 ABC transporter M301_RS08525 PF00795 Carbon-nitrogen hydrolase M301_RS08530 PF01523 Putative modulator of DNA gyrase M301_RS08540 PF00270 DEAD/DEAH box helicase M301_RS08540 PF00271 Helicase conserved C-terminal domain M301_RS08540 PF03461 TRCF domain M301_RS08540 PF02559 CarD-like/TRCF domain M301_RS08540 PF17757 UvrB interaction domain M301_RS08545 PF09335 SNARE associated Golgi protein M301_RS08550 PF00580 UvrD/REP helicase N-terminal domain M301_RS08550 PF12705 PD-(D/E)XK nuclease superfamily M301_RS08550 PF13361 UvrD-like helicase C-terminal domain M301_RS08555 PF12705 PD-(D/E)XK nuclease superfamily M301_RS08560 PF08447 PAS fold M301_RS08560 PF08447 PAS fold M301_RS08560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS08560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS08565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS08565 PF00672 HAMP domain M301_RS08565 PF02203 Tar ligand binding domain homologue M301_RS08570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS08570 PF02203 Tar ligand binding domain homologue M301_RS08570 PF00672 HAMP domain M301_RS08580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS08580 PF08447 PAS fold M301_RS08580 PF13426 PAS domain M301_RS08585 PF01584 CheW-like domain M301_RS08590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS08590 PF09078 CheY binding M301_RS08590 PF01584 CheW-like domain M301_RS08590 PF01627 Hpt domain M301_RS08590 PF02895 Signal transducing histidine kinase, homodimeric domain M301_RS08595 PF00072 Response regulator receiver domain M301_RS08605 PF00691 OmpA family M301_RS08605 PF13677 Membrane MotB of proton-channel complex MotA/MotB M301_RS08610 PF01618 MotA/TolQ/ExbB proton channel family M301_RS08620 PF05280 Flagellar transcriptional activator (FlhC) M301_RS08625 PF05247 Flagellar transcriptional activator (FlhD) M301_RS08630 PF01312 FlhB HrpN YscU SpaS Family M301_RS08635 PF00771 FHIPEP family M301_RS08640 PF00448 SRP54-type protein, GTPase domain M301_RS08650 PF04539 Sigma-70 region 3 M301_RS08650 PF04545 Sigma-70, region 4 M301_RS08650 PF04542 Sigma-70 region 2 M301_RS08655 PF01618 MotA/TolQ/ExbB proton channel family M301_RS08660 PF00691 OmpA family M301_RS08660 PF13677 Membrane MotB of proton-channel complex MotA/MotB M301_RS08675 PF04316 Anti-sigma-28 factor, FlgM M301_RS08685 PF00460 Flagella basal body rod protein M301_RS08690 PF00460 Flagella basal body rod protein M301_RS08690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M301_RS08695 PF03963 Flagellar hook capping protein - N-terminal region M301_RS08695 PF13860 FlgD Ig-like domain M301_RS08695 PF13861 FlgD Tudor-like domain M301_RS08700 PF00460 Flagella basal body rod protein M301_RS08700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M301_RS08700 PF07559 Flagellar basal body protein FlaE M301_RS08705 PF00460 Flagella basal body rod protein M301_RS08705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M301_RS08710 PF00460 Flagella basal body rod protein M301_RS08710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M301_RS08715 PF02107 Flagellar L-ring protein M301_RS08720 PF02119 Flagellar P-ring protein M301_RS08725 PF10135 Rod binding protein M301_RS08725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M301_RS08730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M301_RS08730 PF00460 Flagella basal body rod protein M301_RS08735 PF00669 Bacterial flagellin N-terminal helical region M301_RS08745 PF08334 Type II secretion system (T2SS), protein G M301_RS08745 PF07963 Prokaryotic N-terminal methylation motif M301_RS08750 PF00482 Type II secretion system (T2SS), protein F M301_RS08755 PF00437 Type II/IV secretion system protein M301_RS08775 PF00263 Bacterial type II and III secretion system protein M301_RS08775 PF03958 Bacterial type II/III secretion system short domain M301_RS08780 PF07963 Prokaryotic N-terminal methylation motif M301_RS08780 PF08334 Type II secretion system (T2SS), protein G M301_RS08785 PF07963 Prokaryotic N-terminal methylation motif M301_RS08785 PF00114 Pilin (bacterial filament) M301_RS08805 PF05170 AsmA family M301_RS08820 PF00005 ABC transporter M301_RS08825 PF02405 Permease MlaE M301_RS08840 PF00535 Glycosyl transferase family 2 M301_RS08845 PF14883 Hypothetical glycosyl hydrolase family 13 M301_RS08845 PF01522 Polysaccharide deacetylase M301_RS08855 PF01594 AI-2E family transporter M301_RS08860 PF03707 Bacterial signalling protein N terminal repeat M301_RS08860 PF00563 EAL domain M301_RS08860 PF00990 Diguanylate cyclase, GGDEF domain M301_RS08885 PF00216 Bacterial DNA-binding protein M301_RS08890 PF03483 B3/4 domain M301_RS08890 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M301_RS08890 PF01588 Putative tRNA binding domain M301_RS08890 PF03147 Ferredoxin-fold anticodon binding domain M301_RS08890 PF03484 tRNA synthetase B5 domain M301_RS08895 PF01409 tRNA synthetases class II core domain (F) M301_RS08895 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M301_RS08900 PF00453 Ribosomal protein L20 M301_RS08905 PF01632 Ribosomal protein L35 M301_RS08910 PF00707 Translation initiation factor IF-3, C-terminal domain M301_RS08910 PF05198 Translation initiation factor IF-3, N-terminal domain M301_RS08915 PF03129 Anticodon binding domain M301_RS08915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M301_RS08915 PF02824 TGS domain M301_RS08915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M301_RS08925 PF13406 Transglycosylase SLT domain M301_RS08935 PF00293 NUDIX domain M301_RS08940 PF04228 Putative neutral zinc metallopeptidase M301_RS08945 PF00361 Proton-conducting membrane transporter M301_RS08950 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus M301_RS08950 PF00361 Proton-conducting membrane transporter M301_RS08955 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M301_RS08955 PF00361 Proton-conducting membrane transporter M301_RS08960 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M301_RS08965 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 M301_RS08970 PF12838 4Fe-4S dicluster domain M301_RS08975 PF00146 NADH dehydrogenase M301_RS08980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M301_RS08980 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M301_RS08980 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M301_RS08980 PF00384 Molybdopterin oxidoreductase M301_RS08980 PF00384 Molybdopterin oxidoreductase M301_RS08980 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal M301_RS08985 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M301_RS08985 PF10531 SLBB domain M301_RS08985 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M301_RS08995 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit M301_RS09000 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit M301_RS09005 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit M301_RS09010 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 M301_RS09020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M301_RS09025 PF00873 AcrB/AcrD/AcrF family M301_RS09035 PF01548 Transposase M301_RS09035 PF02371 Transposase IS116/IS110/IS902 family M301_RS09045 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M301_RS09060 PF02801 Beta-ketoacyl synthase, C-terminal domain M301_RS09060 PF00109 Beta-ketoacyl synthase, N-terminal domain M301_RS09065 PF00550 Phosphopantetheine attachment site M301_RS09070 PF12146 Serine aminopeptidase, S33 M301_RS09075 PF00202 Aminotransferase class-III M301_RS09095 PF00271 Helicase conserved C-terminal domain M301_RS09095 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) M301_RS09095 PF04851 Type III restriction enzyme, res subunit M301_RS09095 PF08463 EcoEI R protein C-terminal M301_RS09100 PF02661 Fic/DOC family M301_RS09100 PF13784 Fic/DOC family N-terminal M301_RS09115 PF02384 N-6 DNA Methylase M301_RS09115 PF12161 HsdM N-terminal domain M301_RS09135 PF01076 Plasmid recombination enzyme M301_RS09135 PF13154 Protein of unknown function (DUF3991) M301_RS09150 PF13356 Arm DNA-binding domain M301_RS09150 PF00589 Phage integrase family M301_RS09160 PF03840 Preprotein translocase SecG subunit M301_RS09165 PF00121 Triosephosphate isomerase M301_RS09170 PF01256 Carbohydrate kinase M301_RS09180 PF17768 RecJ OB domain M301_RS09180 PF02272 DHHA1 domain M301_RS09180 PF01368 DHH family M301_RS09185 PF01368 DHH family M301_RS09185 PF02272 DHHA1 domain M301_RS09185 PF17768 RecJ OB domain M301_RS09195 PF02566 OsmC-like protein M301_RS09200 PF01738 Dienelactone hydrolase family M301_RS09205 PF01047 MarR family M301_RS09215 PF00654 Voltage gated chloride channel M301_RS09220 PF00691 OmpA family M301_RS09260 PF08521 Two-component sensor kinase N-terminal M301_RS09260 PF00512 His Kinase A (phospho-acceptor) domain M301_RS09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS09265 PF00072 Response regulator receiver domain M301_RS09265 PF00486 Transcriptional regulatory protein, C terminal M301_RS09300 PF01566 Natural resistance-associated macrophage protein M301_RS09305 PF13396 Phospholipase_D-nuclease N-terminal M301_RS09305 PF13091 PLD-like domain M301_RS09345 PF03466 LysR substrate binding domain M301_RS09345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS09350 PF03601 Conserved hypothetical protein 698 M301_RS09370 PF12706 Beta-lactamase superfamily domain M301_RS09370 PF00753 Metallo-beta-lactamase superfamily M301_RS09375 PF00589 Phage integrase family M301_RS09375 PF13495 Phage integrase, N-terminal SAM-like domain M301_RS09430 PF00589 Phage integrase family M301_RS09430 PF02899 Phage integrase, N-terminal SAM-like domain M301_RS09435 PF17768 RecJ OB domain M301_RS09435 PF01368 DHH family M301_RS09435 PF02272 DHHA1 domain M301_RS09470 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS09475 PF03459 TOBE domain M301_RS09475 PF00005 ABC transporter M301_RS09480 PF11798 IMS family HHH motif M301_RS09480 PF11799 impB/mucB/samB family C-terminal domain M301_RS09480 PF00817 impB/mucB/samB family M301_RS09495 PF01625 Peptide methionine sulfoxide reductase M301_RS09500 PF01544 CorA-like Mg2+ transporter protein M301_RS09520 PF01613 Flavin reductase like domain M301_RS09530 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M301_RS09530 PF00749 tRNA synthetases class I (E and Q), catalytic domain M301_RS09535 PF03099 Biotin/lipoate A/B protein ligase family M301_RS09535 PF02237 Biotin protein ligase C terminal domain M301_RS09535 PF08279 HTH domain M301_RS09540 PF03309 Type III pantothenate kinase M301_RS09550 PF01975 Survival protein SurE M301_RS09560 PF01551 Peptidase family M23 M301_RS09560 PF01476 LysM domain M301_RS09570 PF00085 Thioredoxin M301_RS09580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M301_RS09585 PF04264 YceI-like domain M301_RS09590 PF17954 Quercetinase C-terminal cupin domain M301_RS09590 PF02678 Pirin M301_RS09595 PF03466 LysR substrate binding domain M301_RS09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS09600 PF17863 AAA lid domain M301_RS09600 PF07726 ATPase family associated with various cellular activities (AAA) M301_RS09610 PF13559 Domain of unknown function (DUF4129) M301_RS09610 PF01841 Transglutaminase-like superfamily M301_RS09610 PF11992 Domain of unknown function (DUF3488) M301_RS09615 PF14437 MafB19-like deaminase M301_RS09620 PF01027 Inhibitor of apoptosis-promoting Bax1 M301_RS09625 PF00933 Glycosyl hydrolase family 3 N terminal domain M301_RS09630 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS09630 PF12911 N-terminal TM domain of oligopeptide transport permease C M301_RS09635 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS09640 PF03734 L,D-transpeptidase catalytic domain M301_RS09645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M301_RS09660 PF00106 short chain dehydrogenase M301_RS09670 PF00501 AMP-binding enzyme M301_RS09690 PF00512 His Kinase A (phospho-acceptor) domain M301_RS09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS09695 PF00158 Sigma-54 interaction domain M301_RS09695 PF00072 Response regulator receiver domain M301_RS09695 PF02954 Bacterial regulatory protein, Fis family M301_RS09700 PF00115 Cytochrome C and Quinol oxidase polypeptide I M301_RS09715 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M301_RS09715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M301_RS09720 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M301_RS09720 PF12801 4Fe-4S binding domain M301_RS09720 PF13746 4Fe-4S dicluster domain M301_RS09730 PF01494 FAD binding domain M301_RS09740 PF13545 Crp-like helix-turn-helix domain M301_RS09740 PF00027 Cyclic nucleotide-binding domain M301_RS09745 PF06969 HemN C-terminal domain M301_RS09745 PF04055 Radical SAM superfamily M301_RS09750 PF03922 OmpW family M301_RS09760 PF05958 tRNA (Uracil-5-)-methyltransferase M301_RS09760 PF01938 TRAM domain M301_RS09790 PF00291 Pyridoxal-phosphate dependent enzyme M301_RS09795 PF02600 Disulfide bond formation protein DsbB M301_RS09800 PF13742 OB-fold nucleic acid binding domain M301_RS09800 PF02601 Exonuclease VII, large subunit M301_RS09805 PF02541 Ppx/GppA phosphatase family M301_RS09820 PF13090 Polyphosphate kinase C-terminal domain 2 M301_RS09820 PF13089 Polyphosphate kinase N-terminal domain M301_RS09820 PF02503 Polyphosphate kinase middle domain M301_RS09820 PF17941 Polyphosphate kinase C-terminal domain 1 M301_RS09830 PF00899 ThiF family M301_RS09835 PF01648 4'-phosphopantetheinyl transferase superfamily M301_RS09840 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M301_RS09845 PF02565 Recombination protein O C terminal M301_RS09845 PF11967 Recombination protein O N terminal M301_RS09855 PF01926 50S ribosome-binding GTPase M301_RS09855 PF07650 KH domain M301_RS09860 PF14622 Ribonuclease-III-like M301_RS09860 PF00035 Double-stranded RNA binding motif M301_RS09870 PF10502 Signal peptidase, peptidase S26 M301_RS09875 PF00009 Elongation factor Tu GTP binding domain M301_RS09875 PF03144 Elongation factor Tu domain 2 M301_RS09875 PF00679 Elongation factor G C-terminus M301_RS09875 PF06421 GTP-binding protein LepA C-terminus M301_RS09885 PF03372 Endonuclease/Exonuclease/phosphatase family M301_RS09890 PF13091 PLD-like domain M301_RS09895 PF13180 PDZ domain M301_RS09905 PF17188 MucB/RseB C-terminal domain M301_RS09905 PF03888 MucB/RseB N-terminal domain M301_RS09915 PF08281 Sigma-70, region 4 M301_RS09915 PF04542 Sigma-70 region 2 M301_RS09920 PF02910 Fumarate reductase flavoprotein C-term M301_RS09920 PF00890 FAD binding domain M301_RS09925 PF00565 Staphylococcal nuclease homologue M301_RS09930 PF00271 Helicase conserved C-terminal domain M301_RS09930 PF00270 DEAD/DEAH box helicase M301_RS09935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M301_RS09945 PF05192 MutS domain III M301_RS09945 PF01624 MutS domain I M301_RS09945 PF05190 MutS family domain IV M301_RS09945 PF00488 MutS domain V M301_RS09945 PF05188 MutS domain II M301_RS09955 PF00459 Inositol monophosphatase family M301_RS09970 PF00588 SpoU rRNA Methylase family M301_RS09975 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS09975 PF06426 Serine acetyltransferase, N-terminal M301_RS09980 PF02082 Transcriptional regulator M301_RS09985 PF00266 Aminotransferase class-V M301_RS09990 PF00266 Aminotransferase class-V M301_RS09995 PF01592 NifU-like N terminal domain M301_RS10000 PF01521 Iron-sulphur cluster biosynthesis M301_RS10005 PF07743 HSCB C-terminal oligomerisation domain M301_RS10010 PF00012 Hsp70 protein M301_RS10015 PF00111 2Fe-2S iron-sulfur cluster binding domain M301_RS10020 PF00484 Carbonic anhydrase M301_RS10035 PF00152 tRNA synthetases class II (D, K and N) M301_RS10035 PF01336 OB-fold nucleic acid binding domain M301_RS10040 PF03462 PCRF domain M301_RS10040 PF00472 RF-1 domain M301_RS10050 PF03960 ArsC family M301_RS10055 PF01865 Protein of unknown function DUF47 M301_RS10060 PF01384 Phosphate transporter family M301_RS10065 PF12849 PBP superfamily domain M301_RS10070 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS10075 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS10080 PF00005 ABC transporter M301_RS10085 PF01895 PhoU domain M301_RS10090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M301_RS10090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M301_RS10090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M301_RS10090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M301_RS10095 PF00809 Pterin binding enzyme M301_RS10100 PF06480 FtsH Extracellular M301_RS10100 PF01434 Peptidase family M41 M301_RS10100 PF00004 ATPase family associated with various cellular activities (AAA) M301_RS10100 PF17862 AAA+ lid domain M301_RS10105 PF01728 FtsJ-like methyltransferase M301_RS10110 PF01985 CRS1 / YhbY (CRM) domain M301_RS10120 PF01272 Transcription elongation factor, GreA/GreB, C-term M301_RS10120 PF03449 Transcription elongation factor, N-terminal M301_RS10125 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M301_RS10125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS10125 PF02142 MGS-like domain M301_RS10135 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M301_RS10135 PF00117 Glutamine amidotransferase class-I M301_RS10140 PF00120 Glutamine synthetase, catalytic domain M301_RS10150 PF01113 Dihydrodipicolinate reductase, N-terminus M301_RS10150 PF05173 Dihydrodipicolinate reductase, C-terminus M301_RS10155 PF04355 SmpA / OmlA family M301_RS10160 PF01475 Ferric uptake regulator family M301_RS10165 PF02463 RecF/RecN/SMC N terminal domain M301_RS10170 PF01513 ATP-NAD kinase M301_RS10175 PF01628 HrcA protein C terminal domain M301_RS10180 PF00762 Ferrochelatase M301_RS10185 PF01370 NAD dependent epimerase/dehydratase family M301_RS10190 PF01467 Cytidylyltransferase-like M301_RS10190 PF00294 pfkB family carbohydrate kinase M301_RS10195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M301_RS10225 PF01081 KDPG and KHG aldolase M301_RS10230 PF00920 Dehydratase family M301_RS10245 PF00535 Glycosyl transferase family 2 M301_RS10255 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M301_RS10265 PF01025 GrpE M301_RS10270 PF00012 Hsp70 protein M301_RS10275 PF00226 DnaJ domain M301_RS10275 PF01556 DnaJ C terminal domain M301_RS10275 PF00684 DnaJ central domain M301_RS10280 PF00521 DNA gyrase/topoisomerase IV, subunit A M301_RS10285 PF01751 Toprim domain M301_RS10285 PF00204 DNA gyrase B M301_RS10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS10285 PF00986 DNA gyrase B subunit, carboxyl terminus M301_RS10295 PF00486 Transcriptional regulatory protein, C terminal M301_RS10295 PF00072 Response regulator receiver domain M301_RS10300 PF00672 HAMP domain M301_RS10300 PF00512 His Kinase A (phospho-acceptor) domain M301_RS10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS10305 PF06123 Inner membrane protein CreD M301_RS10315 PF01541 GIY-YIG catalytic domain M301_RS10320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M301_RS10325 PF00037 4Fe-4S binding domain M301_RS10330 PF01467 Cytidylyltransferase-like M301_RS10340 PF05193 Peptidase M16 inactive domain M301_RS10345 PF05193 Peptidase M16 inactive domain M301_RS10345 PF00675 Insulinase (Peptidase family M16) M301_RS10355 PF04143 Sulphur transport M301_RS10365 PF02881 SRP54-type protein, helical bundle domain M301_RS10365 PF00448 SRP54-type protein, GTPase domain M301_RS10370 PF00005 ABC transporter M301_RS10375 PF18075 FtsX extracellular domain M301_RS10390 PF00563 EAL domain M301_RS10390 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10390 PF10442 FIST C domain M301_RS10390 PF08495 FIST N domain M301_RS10395 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10395 PF05231 MASE1 M301_RS10395 PF00563 EAL domain M301_RS10395 PF13426 PAS domain M301_RS10395 PF08448 PAS fold M301_RS10395 PF08447 PAS fold M301_RS10410 PF00296 Luciferase-like monooxygenase M301_RS10425 PF00109 Beta-ketoacyl synthase, N-terminal domain M301_RS10425 PF02801 Beta-ketoacyl synthase, C-terminal domain M301_RS10430 PF07690 Major Facilitator Superfamily M301_RS10435 PF00561 alpha/beta hydrolase fold M301_RS10440 PF00440 Bacterial regulatory proteins, tetR family M301_RS10450 PF12334 Rickettsia outer membrane protein B M301_RS10450 PF03797 Autotransporter beta-domain M301_RS10460 PF05114 Protein of unknown function (DUF692) M301_RS10470 PF08534 Redoxin M301_RS10475 PF02683 Cytochrome C biogenesis protein transmembrane region M301_RS10485 PF00665 Integrase core domain M301_RS10490 PF01695 IstB-like ATP binding protein M301_RS10495 PF02702 Osmosensitive K+ channel His kinase sensor domain M301_RS10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS10495 PF13492 GAF domain M301_RS10495 PF13493 Domain of unknown function (DUF4118) M301_RS10495 PF00512 His Kinase A (phospho-acceptor) domain M301_RS10500 PF02669 K+-transporting ATPase, c chain M301_RS10510 PF03814 Potassium-transporting ATPase A subunit M301_RS10515 PF00893 Small Multidrug Resistance protein M301_RS10520 PF13180 PDZ domain M301_RS10525 PF00011 Hsp20/alpha crystallin family M301_RS10535 PF08448 PAS fold M301_RS10535 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10540 PF13193 AMP-binding enzyme C-terminal domain M301_RS10540 PF00501 AMP-binding enzyme M301_RS10545 PF00221 Aromatic amino acid lyase M301_RS10550 PF08495 FIST N domain M301_RS10550 PF10442 FIST C domain M301_RS10550 PF00563 EAL domain M301_RS10550 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10560 PF10442 FIST C domain M301_RS10560 PF08495 FIST N domain M301_RS10560 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10560 PF00563 EAL domain M301_RS10575 PF00360 Phytochrome region M301_RS10575 PF00563 EAL domain M301_RS10575 PF01590 GAF domain M301_RS10575 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10580 PF00140 Sigma-70 factor, region 1.2 M301_RS10580 PF04542 Sigma-70 region 2 M301_RS10580 PF04545 Sigma-70, region 4 M301_RS10585 PF00350 Dynamin family M301_RS10595 PF01209 ubiE/COQ5 methyltransferase family M301_RS10605 PF03109 ABC1 family M301_RS10610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M301_RS10610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M301_RS10610 PF06827 Zinc finger found in FPG and IleRS M301_RS10630 PF00005 ABC transporter M301_RS10640 PF03550 Outer membrane lipoprotein LolB M301_RS10645 PF00194 Eukaryotic-type carbonic anhydrase M301_RS10650 PF08544 GHMP kinases C terminal M301_RS10650 PF00288 GHMP kinases N terminal domain M301_RS10660 PF14572 Phosphoribosyl synthetase-associated domain M301_RS10660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M301_RS10665 PF14693 Ribosomal protein TL5, C-terminal domain M301_RS10665 PF01386 Ribosomal L25p family M301_RS10670 PF01195 Peptidyl-tRNA hydrolase M301_RS10675 PF01926 50S ribosome-binding GTPase M301_RS10675 PF06071 Protein of unknown function (DUF933) M301_RS10685 PF13356 Arm DNA-binding domain M301_RS10685 PF00589 Phage integrase family M301_RS10725 PF07311 Dodecin M301_RS10730 PF04244 Deoxyribodipyrimidine photo-lyase-related protein M301_RS10745 PF00106 short chain dehydrogenase M301_RS10760 PF00486 Transcriptional regulatory protein, C terminal M301_RS10760 PF00072 Response regulator receiver domain M301_RS10765 PF00512 His Kinase A (phospho-acceptor) domain M301_RS10765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS10765 PF00672 HAMP domain M301_RS10770 PF00563 EAL domain M301_RS10770 PF03707 Bacterial signalling protein N terminal repeat M301_RS10770 PF00990 Diguanylate cyclase, GGDEF domain M301_RS10775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M301_RS10775 PF14824 Sirohaem biosynthesis protein central M301_RS10775 PF10414 Sirohaem synthase dimerisation region M301_RS10785 PF01938 TRAM domain M301_RS10785 PF04055 Radical SAM superfamily M301_RS10785 PF00919 Uncharacterized protein family UPF0004 M301_RS10790 PF02562 PhoH-like protein M301_RS10800 PF02130 Uncharacterized protein family UPF0054 M301_RS10805 PF03471 Transporter associated domain M301_RS10805 PF00571 CBS domain M301_RS10810 PF01741 Large-conductance mechanosensitive channel, MscL M301_RS10815 PF00795 Carbon-nitrogen hydrolase M301_RS10820 PF02091 Glycyl-tRNA synthetase alpha subunit M301_RS10830 PF05746 DALR anticodon binding domain M301_RS10830 PF02092 Glycyl-tRNA synthetase beta subunit M301_RS10850 PF05656 Protein of unknown function (DUF805) M301_RS10855 PF02630 SCO1/SenC M301_RS10860 PF01063 Amino-transferase class IV M301_RS10870 PF01177 Asp/Glu/Hydantoin racemase M301_RS10875 PF01923 Cobalamin adenosyltransferase M301_RS10880 PF12627 Probable RNA and SrmB- binding site of polymerase A M301_RS10880 PF12626 Polymerase A arginine-rich C-terminus M301_RS10880 PF01743 Poly A polymerase head domain M301_RS10885 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M301_RS10890 PF01712 Deoxynucleoside kinase M301_RS10895 PF02548 Ketopantoate hydroxymethyltransferase M301_RS10900 PF02569 Pantoate-beta-alanine ligase M301_RS10905 PF02261 Aspartate decarboxylase M301_RS10915 PF02590 Predicted SPOUT methyltransferase M301_RS10920 PF00875 DNA photolyase M301_RS10920 PF03441 FAD binding domain of DNA photolyase M301_RS10925 PF01116 Fructose-bisphosphate aldolase class-II M301_RS10930 PF00121 Triosephosphate isomerase M301_RS10935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M301_RS10945 PF01523 Putative modulator of DNA gyrase M301_RS10950 PF04751 Protein of unknown function (DUF615) M301_RS10955 PF00999 Sodium/hydrogen exchanger family M301_RS10965 PF00994 Probable molybdopterin binding domain M301_RS10975 PF02769 AIR synthase related protein, C-terminal domain M301_RS10975 PF00586 AIR synthase related protein, N-terminal domain M301_RS10980 PF04608 Phosphatidylglycerophosphatase A M301_RS10985 PF02464 Competence-damaged protein M301_RS11000 PF00782 Dual specificity phosphatase, catalytic domain M301_RS11005 PF12147 Putative methyltransferase M301_RS11005 PF12146 Serine aminopeptidase, S33 M301_RS11020 PF01066 CDP-alcohol phosphatidyltransferase M301_RS11025 PF00154 recA bacterial DNA recombination protein M301_RS11030 PF02631 RecX family M301_RS11035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M301_RS11035 PF01411 tRNA synthetases class II (A) M301_RS11035 PF02272 DHHA1 domain M301_RS11040 PF01842 ACT domain M301_RS11040 PF13840 ACT domain M301_RS11040 PF00696 Amino acid kinase family M301_RS11055 PF02796 Helix-turn-helix domain of resolvase M301_RS11055 PF00239 Resolvase, N terminal domain M301_RS11060 PF00565 Staphylococcal nuclease homologue M301_RS11075 PF00817 impB/mucB/samB family M301_RS11075 PF11799 impB/mucB/samB family C-terminal domain M301_RS11075 PF11798 IMS family HHH motif M301_RS11075 PF13438 Domain of unknown function (DUF4113) M301_RS11080 PF00717 Peptidase S24-like M301_RS11095 PF00589 Phage integrase family M301_RS11125 PF00563 EAL domain M301_RS11125 PF03707 Bacterial signalling protein N terminal repeat M301_RS11125 PF00990 Diguanylate cyclase, GGDEF domain M301_RS11130 PF00999 Sodium/hydrogen exchanger family M301_RS11130 PF02254 TrkA-N domain M301_RS11145 PF02525 Flavodoxin-like fold M301_RS11155 PF00392 Bacterial regulatory proteins, gntR family M301_RS11155 PF00155 Aminotransferase class I and II M301_RS11160 PF00107 Zinc-binding dehydrogenase M301_RS11160 PF08240 Alcohol dehydrogenase GroES-like domain M301_RS11170 PF00717 Peptidase S24-like M301_RS11170 PF01726 LexA DNA binding domain M301_RS11175 PF01914 MarC family integral membrane protein M301_RS11185 PF00289 Biotin carboxylase, N-terminal domain M301_RS11185 PF02785 Biotin carboxylase C-terminal domain M301_RS11185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M301_RS11200 PF00120 Glutamine synthetase, catalytic domain M301_RS11205 PF02633 Creatinine amidohydrolase M301_RS11210 PF00005 ABC transporter M301_RS11215 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS11220 PF09084 NMT1/THI5 like M301_RS11230 PF07690 Major Facilitator Superfamily M301_RS11260 PF17863 AAA lid domain M301_RS11260 PF07726 ATPase family associated with various cellular activities (AAA) M301_RS11270 PF00440 Bacterial regulatory proteins, tetR family M301_RS11275 PF01047 MarR family M301_RS11280 PF02321 Outer membrane efflux protein M301_RS11285 PF04632 Fusaric acid resistance protein family M301_RS11295 PF13533 Biotin-lipoyl like M301_RS11300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS11300 PF03466 LysR substrate binding domain M301_RS11305 PF01799 [2Fe-2S] binding domain M301_RS11305 PF00111 2Fe-2S iron-sulfur cluster binding domain M301_RS11310 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase M301_RS11315 PF02625 XdhC and CoxI family M301_RS11315 PF13478 XdhC Rossmann domain M301_RS11325 PF00483 Nucleotidyl transferase M301_RS11330 PF08544 GHMP kinases C terminal M301_RS11330 PF00288 GHMP kinases N terminal domain M301_RS11335 PF13580 SIS domain M301_RS11340 PF00483 Nucleotidyl transferase M301_RS11350 PF03808 Glycosyl transferase WecB/TagA/CpsF family M301_RS11360 PF16363 GDP-mannose 4,6 dehydratase M301_RS11365 PF03808 Glycosyl transferase WecB/TagA/CpsF family M301_RS11380 PF01757 Acyltransferase family M301_RS11385 PF00732 GMC oxidoreductase M301_RS11385 PF05199 GMC oxidoreductase M301_RS11405 PF00793 DAHP synthetase I family M301_RS11410 PF00535 Glycosyl transferase family 2 M301_RS11430 PF04230 Polysaccharide pyruvyl transferase M301_RS11440 PF09721 Transmembrane exosortase (Exosortase_EpsH) M301_RS11445 PF13614 AAA domain M301_RS11475 PF00072 Response regulator receiver domain M301_RS11475 PF00196 Bacterial regulatory proteins, luxR family M301_RS11480 PF02397 Bacterial sugar transferase M301_RS11495 PF01040 UbiA prenyltransferase family M301_RS11500 PF02628 Cytochrome oxidase assembly protein M301_RS11520 PF00510 Cytochrome c oxidase subunit III M301_RS11525 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 M301_RS11530 PF00115 Cytochrome C and Quinol oxidase polypeptide I M301_RS11535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M301_RS11535 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M301_RS11550 PF02547 Queuosine biosynthesis protein M301_RS11565 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M301_RS11565 PF01464 Transglycosylase SLT domain M301_RS11570 PF04073 Aminoacyl-tRNA editing domain M301_RS11570 PF03129 Anticodon binding domain M301_RS11570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M301_RS11585 PF04536 TPM domain M301_RS11590 PF04011 LemA family M301_RS11600 PF00583 Acetyltransferase (GNAT) family M301_RS11605 PF00814 Glycoprotease family M301_RS11610 PF00472 RF-1 domain M301_RS11620 PF02678 Pirin M301_RS11620 PF05726 Pirin C-terminal cupin domain M301_RS11625 PF04264 YceI-like domain M301_RS11630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS11630 PF03466 LysR substrate binding domain M301_RS11665 PF00501 AMP-binding enzyme M301_RS11670 PF07977 FabA-like domain M301_RS11695 PF01522 Polysaccharide deacetylase M301_RS11700 PF00109 Beta-ketoacyl synthase, N-terminal domain M301_RS11700 PF02801 Beta-ketoacyl synthase, C-terminal domain M301_RS11740 PF03441 FAD binding domain of DNA photolyase M301_RS11740 PF00875 DNA photolyase M301_RS11750 PF03473 MOSC domain M301_RS11750 PF03475 3-alpha domain M301_RS11760 PF00072 Response regulator receiver domain M301_RS11760 PF00512 His Kinase A (phospho-acceptor) domain M301_RS11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS11760 PF00672 HAMP domain M301_RS11760 PF01627 Hpt domain M301_RS11760 PF17149 Periplasmic sensor domain found in signal transduction proteins M301_RS11765 PF00563 EAL domain M301_RS11765 PF03707 Bacterial signalling protein N terminal repeat M301_RS11765 PF00990 Diguanylate cyclase, GGDEF domain M301_RS11770 PF00893 Small Multidrug Resistance protein M301_RS11810 PF00589 Phage integrase family M301_RS11820 PF02881 SRP54-type protein, helical bundle domain M301_RS11820 PF02978 Signal peptide binding domain M301_RS11820 PF00448 SRP54-type protein, GTPase domain M301_RS11825 PF01578 Cytochrome C assembly protein M301_RS11835 PF00892 EamA-like transporter family M301_RS11840 PF08502 LeuA allosteric (dimerisation) domain M301_RS11840 PF00682 HMGL-like M301_RS11845 PF01066 CDP-alcohol phosphatidyltransferase M301_RS11860 PF01702 Queuine tRNA-ribosyltransferase M301_RS11870 PF02699 Preprotein translocase subunit M301_RS11875 PF02355 Protein export membrane protein M301_RS11875 PF07549 SecD/SecF GG Motif M301_RS11875 PF13721 SecD export protein N-terminal TM region M301_RS11880 PF07549 SecD/SecF GG Motif M301_RS11880 PF02355 Protein export membrane protein M301_RS11885 PF00571 CBS domain M301_RS11885 PF03471 Transporter associated domain M301_RS11885 PF01595 Cyclin M transmembrane N-terminal domain M301_RS11890 PF02617 ATP-dependent Clp protease adaptor protein ClpS M301_RS11895 PF00004 ATPase family associated with various cellular activities (AAA) M301_RS11895 PF07724 AAA domain (Cdc48 subfamily) M301_RS11895 PF17871 AAA lid domain M301_RS11895 PF10431 C-terminal, D2-small domain, of ClpB protein M301_RS11895 PF02861 Clp amino terminal domain, pathogenicity island component M301_RS11905 PF01180 Dihydroorotate dehydrogenase M301_RS11910 PF07694 5TMR of 5TMR-LYT M301_RS11910 PF00990 Diguanylate cyclase, GGDEF domain M301_RS11925 PF01568 Molydopterin dinucleotide binding domain M301_RS11925 PF00384 Molybdopterin oxidoreductase M301_RS11925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M301_RS11930 PF08007 Cupin superfamily protein M301_RS11950 PF00753 Metallo-beta-lactamase superfamily M301_RS11950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M301_RS11950 PF17770 Ribonuclease J C-terminal domain M301_RS11955 PF06804 NlpB/DapX lipoprotein M301_RS11960 PF00701 Dihydrodipicolinate synthetase family M301_RS11965 PF02508 Rnf-Nqr subunit, membrane protein M301_RS11970 PF04060 Putative Fe-S cluster M301_RS11975 PF12838 4Fe-4S dicluster domain M301_RS11975 PF10531 SLBB domain M301_RS11975 PF13375 RnfC Barrel sandwich hybrid domain M301_RS11975 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M301_RS11980 PF03116 NQR2, RnfD, RnfE family M301_RS11985 PF04205 FMN-binding domain M301_RS11990 PF02508 Rnf-Nqr subunit, membrane protein M301_RS11995 PF00730 HhH-GPD superfamily base excision DNA repair protein M301_RS11995 PF10576 Iron-sulfur binding domain of endonuclease III M301_RS11995 PF00633 Helix-hairpin-helix motif M301_RS12010 PF04542 Sigma-70 region 2 M301_RS12010 PF08281 Sigma-70, region 4 M301_RS12025 PF05114 Protein of unknown function (DUF692) M301_RS12040 PF07517 SecA DEAD-like domain M301_RS12040 PF02810 SEC-C motif M301_RS12040 PF07516 SecA Wing and Scaffold domain M301_RS12040 PF01043 SecA preprotein cross-linking domain M301_RS12045 PF08525 Opacity-associated protein A N-terminal motif M301_RS12045 PF01551 Peptidase family M23 M301_RS12045 PF01476 LysM domain M301_RS12055 PF03030 Inorganic H+ pyrophosphatase M301_RS12065 PF00719 Inorganic pyrophosphatase M301_RS12075 PF01259 SAICAR synthetase M301_RS12080 PF02887 Pyruvate kinase, alpha/beta domain M301_RS12080 PF00224 Pyruvate kinase, barrel domain M301_RS12085 PF00162 Phosphoglycerate kinase M301_RS12095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M301_RS12095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M301_RS12100 PF02779 Transketolase, pyrimidine binding domain M301_RS12100 PF02780 Transketolase, C-terminal domain M301_RS12100 PF00456 Transketolase, thiamine diphosphate binding domain M301_RS12110 PF01068 ATP dependent DNA ligase domain M301_RS12110 PF14743 DNA ligase OB-like domain M301_RS12120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M301_RS12120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M301_RS12130 PF04452 RNA methyltransferase M301_RS12135 PF00583 Acetyltransferase (GNAT) family M301_RS12135 PF00696 Amino acid kinase family M301_RS12140 PF00696 Amino acid kinase family M301_RS12150 PF00440 Bacterial regulatory proteins, tetR family M301_RS12160 PF01966 HD domain M301_RS12160 PF01743 Poly A polymerase head domain M301_RS12160 PF12627 Probable RNA and SrmB- binding site of polymerase A M301_RS12170 PF10145 Phage-related minor tail protein M301_RS12170 PF01464 Transglycosylase SLT domain M301_RS12170 PF01551 Peptidase family M23 M301_RS12175 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M301_RS12180 PF00091 Tubulin/FtsZ family, GTPase domain M301_RS12180 PF12327 FtsZ family, C-terminal domain M301_RS12185 PF02491 SHS2 domain inserted in FTSA M301_RS12190 PF03799 Cell division protein FtsQ M301_RS12190 PF08478 POTRA domain, FtsQ-type M301_RS12195 PF07478 D-ala D-ala ligase C-terminus M301_RS12195 PF01820 D-ala D-ala ligase N-terminus M301_RS12200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M301_RS12200 PF01565 FAD binding domain M301_RS12205 PF08245 Mur ligase middle domain M301_RS12205 PF02875 Mur ligase family, glutamate ligase domain M301_RS12205 PF01225 Mur ligase family, catalytic domain M301_RS12210 PF03033 Glycosyltransferase family 28 N-terminal domain M301_RS12210 PF04101 Glycosyltransferase family 28 C-terminal domain M301_RS12215 PF01098 Cell cycle protein M301_RS12220 PF08245 Mur ligase middle domain M301_RS12220 PF02875 Mur ligase family, glutamate ligase domain M301_RS12225 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M301_RS12225 PF00953 Glycosyl transferase family 4 M301_RS12230 PF08245 Mur ligase middle domain M301_RS12230 PF02875 Mur ligase family, glutamate ligase domain M301_RS12230 PF01225 Mur ligase family, catalytic domain M301_RS12235 PF01225 Mur ligase family, catalytic domain M301_RS12235 PF08245 Mur ligase middle domain M301_RS12235 PF02875 Mur ligase family, glutamate ligase domain M301_RS12240 PF00905 Penicillin binding protein transpeptidase domain M301_RS12240 PF03717 Penicillin-binding Protein dimerisation domain M301_RS12245 PF04999 Cell division protein FtsL M301_RS12250 PF01795 MraW methylase family M301_RS12255 PF02381 MraZ protein, putative antitoxin-like M301_RS12260 PF03167 Uracil DNA glycosylase superfamily M301_RS12265 PF01979 Amidohydrolase family M301_RS12275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M301_RS12280 PF02021 Uncharacterised protein family UPF0102 M301_RS12285 PF04972 BON domain M301_RS12295 PF00578 AhpC/TSA family M301_RS12305 PF00085 Thioredoxin M301_RS12310 PF07497 Rho termination factor, RNA-binding domain M301_RS12310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M301_RS12310 PF07498 Rho termination factor, N-terminal domain M301_RS12315 PF01197 Ribosomal protein L31 M301_RS12330 PF02634 FdhD/NarQ family M301_RS12335 PF01568 Molydopterin dinucleotide binding domain M301_RS12335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region M301_RS12335 PF00037 4Fe-4S binding domain M301_RS12335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M301_RS12335 PF00384 Molybdopterin oxidoreductase M301_RS12340 PF00037 4Fe-4S binding domain M301_RS12340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M301_RS12340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region M301_RS12350 PF04055 Radical SAM superfamily M301_RS12350 PF06463 Molybdenum Cofactor Synthesis C M301_RS12355 PF12804 MobA-like NTP transferase domain M301_RS12360 PF00994 Probable molybdopterin binding domain M301_RS12360 PF03453 MoeA N-terminal region (domain I and II) M301_RS12360 PF03454 MoeA C-terminal region (domain IV) M301_RS12365 PF03544 Gram-negative bacterial TonB protein C-terminal M301_RS12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS12370 PF00512 His Kinase A (phospho-acceptor) domain M301_RS12375 PF00578 AhpC/TSA family M301_RS12380 PF02562 PhoH-like protein M301_RS12380 PF13638 PIN domain M301_RS12385 PF07690 Major Facilitator Superfamily M301_RS12390 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS12410 PF00497 Bacterial extracellular solute-binding proteins, family 3 M301_RS12415 PF13360 PQQ-like domain M301_RS12420 PF00561 alpha/beta hydrolase fold M301_RS12435 PF00072 Response regulator receiver domain M301_RS12440 PF00072 Response regulator receiver domain M301_RS12445 PF00072 Response regulator receiver domain M301_RS12445 PF01627 Hpt domain M301_RS12445 PF00512 His Kinase A (phospho-acceptor) domain M301_RS12445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS12450 PF00378 Enoyl-CoA hydratase/isomerase M301_RS12455 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M301_RS12465 PF00990 Diguanylate cyclase, GGDEF domain M301_RS12470 PF00990 Diguanylate cyclase, GGDEF domain M301_RS12470 PF03707 Bacterial signalling protein N terminal repeat M301_RS12470 PF13188 PAS domain M301_RS12470 PF00563 EAL domain M301_RS12480 PF01569 PAP2 superfamily M301_RS12485 PF01928 CYTH domain M301_RS12515 PF01738 Dienelactone hydrolase family M301_RS12530 PF01695 IstB-like ATP binding protein M301_RS12545 PF04545 Sigma-70, region 4 M301_RS12545 PF04546 Sigma-70, non-essential region M301_RS12545 PF04542 Sigma-70 region 2 M301_RS12545 PF00140 Sigma-70 factor, region 1.2 M301_RS12545 PF04539 Sigma-70 region 3 M301_RS12545 PF03979 Sigma-70 factor, region 1.1 M301_RS12550 PF10410 DnaB-helicase binding domain of primase M301_RS12550 PF01807 CHC2 zinc finger M301_RS12550 PF08278 DNA primase DnaG DnaB-binding M301_RS12550 PF08275 DNA primase catalytic core, N-terminal domain M301_RS12555 PF09424 Yqey-like protein M301_RS12565 PF01165 Ribosomal protein S21 M301_RS12570 PF00814 Glycoprotease family M301_RS12575 PF02660 Glycerol-3-phosphate acyltransferase M301_RS12590 PF00589 Phage integrase family M301_RS12590 PF02899 Phage integrase, N-terminal SAM-like domain M301_RS12595 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M301_RS12595 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M301_RS12600 PF01245 Ribosomal protein L19 M301_RS12605 PF01746 tRNA (Guanine-1)-methyltransferase M301_RS12610 PF05239 PRC-barrel domain M301_RS12610 PF01782 RimM N-terminal domain M301_RS12615 PF00886 Ribosomal protein S16 M301_RS12620 PF06508 Queuosine biosynthesis protein QueC M301_RS12625 PF04055 Radical SAM superfamily M301_RS12635 PF00691 OmpA family M301_RS12640 PF07676 WD40-like Beta Propeller Repeat M301_RS12640 PF04052 TolB amino-terminal domain M301_RS12650 PF02472 Biopolymer transport protein ExbD/TolR M301_RS12655 PF01618 MotA/TolQ/ExbB proton channel family M301_RS12660 PF03061 Thioesterase superfamily M301_RS12665 PF05496 Holliday junction DNA helicase RuvB P-loop domain M301_RS12665 PF05491 RuvB C-terminal winged helix domain M301_RS12665 PF17864 RuvB AAA lid domain M301_RS12670 PF00563 EAL domain M301_RS12670 PF00990 Diguanylate cyclase, GGDEF domain M301_RS12670 PF08448 PAS fold M301_RS12685 PF01594 AI-2E family transporter M301_RS12695 PF07499 RuvA, C-terminal domain M301_RS12695 PF01330 RuvA N terminal domain M301_RS12700 PF02075 Crossover junction endodeoxyribonuclease RuvC M301_RS12705 PF01709 Transcriptional regulator M301_RS12710 PF00892 EamA-like transporter family M301_RS12715 PF00571 CBS domain M301_RS12730 PF18331 PKHD-type hydroxylase C-terminal domain M301_RS12730 PF13640 2OG-Fe(II) oxygenase superfamily M301_RS12735 PF07715 TonB-dependent Receptor Plug Domain M301_RS12735 PF00593 TonB dependent receptor M301_RS12740 PF02472 Biopolymer transport protein ExbD/TolR M301_RS12745 PF01618 MotA/TolQ/ExbB proton channel family M301_RS12750 PF03544 Gram-negative bacterial TonB protein C-terminal M301_RS12755 PF10636 Hemin uptake protein hemP M301_RS12770 PF16325 Peptidase family U32 C-terminal domain M301_RS12770 PF01136 Peptidase family U32 M301_RS12790 PF00156 Phosphoribosyl transferase domain M301_RS12795 PF01336 OB-fold nucleic acid binding domain M301_RS12795 PF00152 tRNA synthetases class II (D, K and N) M301_RS12795 PF02938 GAD domain M301_RS12810 PF00436 Single-strand binding protein family M301_RS12815 PF07690 Major Facilitator Superfamily M301_RS12820 PF17760 UvrA interaction domain M301_RS12820 PF17755 UvrA DNA-binding domain M301_RS12830 PF00912 Transglycosylase M301_RS12835 PF08501 Shikimate dehydrogenase substrate binding domain M301_RS12835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M301_RS12835 PF01488 Shikimate / quinate 5-dehydrogenase M301_RS12845 PF00120 Glutamine synthetase, catalytic domain M301_RS12845 PF03951 Glutamine synthetase, beta-Grasp domain M301_RS12855 PF00989 PAS fold M301_RS12855 PF00512 His Kinase A (phospho-acceptor) domain M301_RS12855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS12860 PF00158 Sigma-54 interaction domain M301_RS12860 PF00072 Response regulator receiver domain M301_RS12860 PF02954 Bacterial regulatory protein, Fis family M301_RS12900 PF13286 Phosphohydrolase-associated domain M301_RS12900 PF01966 HD domain M301_RS12905 PF01761 3-dehydroquinate synthase M301_RS12910 PF01202 Shikimate kinase M301_RS12915 PF11741 AMIN domain M301_RS12915 PF07660 Secretin and TonB N terminus short domain M301_RS12915 PF00263 Bacterial type II and III secretion system protein M301_RS12915 PF03958 Bacterial type II/III secretion system short domain M301_RS12925 PF04350 Pilus assembly protein, PilO M301_RS12935 PF11104 Type IV pilus assembly protein PilM; M301_RS12940 PF00905 Penicillin binding protein transpeptidase domain M301_RS12940 PF00912 Transglycosylase M301_RS12940 PF17092 Penicillin-binding protein OB-like domain M301_RS12975 PF00490 Delta-aminolevulinic acid dehydratase M301_RS12980 PF00218 Indole-3-glycerol phosphate synthase M301_RS12990 PF02885 Glycosyl transferase family, helical bundle domain M301_RS12990 PF00591 Glycosyl transferase family, a/b domain M301_RS12995 PF00117 Glutamine amidotransferase class-I M301_RS13000 PF04715 Anthranilate synthase component I, N terminal region M301_RS13000 PF00425 chorismate binding enzyme M301_RS13005 PF13419 Haloacid dehalogenase-like hydrolase M301_RS13010 PF00834 Ribulose-phosphate 3 epimerase family M301_RS13015 PF01488 Shikimate / quinate 5-dehydrogenase M301_RS13015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M301_RS13015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M301_RS13020 PF03462 PCRF domain M301_RS13020 PF00472 RF-1 domain M301_RS13030 PF17827 PrmC N-terminal domain M301_RS13030 PF05175 Methyltransferase small domain M301_RS13040 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS13045 PF00561 alpha/beta hydrolase fold M301_RS13055 PF07690 Major Facilitator Superfamily M301_RS13080 PF00156 Phosphoribosyl transferase domain M301_RS13090 PF02637 GatB domain M301_RS13090 PF02934 GatB/GatE catalytic domain M301_RS13095 PF01425 Amidase M301_RS13100 PF02686 Glu-tRNAGln amidotransferase C subunit M301_RS13110 PF04085 rod shape-determining protein MreC M301_RS13115 PF04093 rod shape-determining protein MreD M301_RS13120 PF00905 Penicillin binding protein transpeptidase domain M301_RS13120 PF03717 Penicillin-binding Protein dimerisation domain M301_RS13125 PF01098 Cell cycle protein M301_RS13130 PF03330 Lytic transglycolase M301_RS13130 PF05036 Sporulation related domain M301_RS13135 PF00768 D-alanyl-D-alanine carboxypeptidase M301_RS13135 PF07943 Penicillin-binding protein 5, C-terminal domain M301_RS13140 PF04359 Protein of unknown function (DUF493) M301_RS13145 PF03099 Biotin/lipoate A/B protein ligase family M301_RS13150 PF04055 Radical SAM superfamily M301_RS13150 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M301_RS13160 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M301_RS13160 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M301_RS13165 PF02424 ApbE family M301_RS13200 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor M301_RS13200 PF07963 Prokaryotic N-terminal methylation motif M301_RS13205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M301_RS13205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M301_RS13210 PF00551 Formyl transferase M301_RS13210 PF01842 ACT domain M301_RS13215 PF02401 LytB protein M301_RS13220 PF00293 NUDIX domain M301_RS13225 PF02445 Quinolinate synthetase A protein M301_RS13245 PF01225 Mur ligase family, catalytic domain M301_RS13245 PF02875 Mur ligase family, glutamate ligase domain M301_RS13245 PF08245 Mur ligase middle domain M301_RS13250 PF02310 B12 binding domain M301_RS13250 PF02574 Homocysteine S-methyltransferase M301_RS13250 PF02965 Vitamin B12 dependent methionine synthase, activation domain M301_RS13250 PF00809 Pterin binding enzyme M301_RS13250 PF02607 B12 binding domain M301_RS13260 PF13335 Magnesium chelatase, subunit ChlI C-terminal M301_RS13260 PF01078 Magnesium chelatase, subunit ChlI M301_RS13280 PF01695 IstB-like ATP binding protein M301_RS13290 PF01078 Magnesium chelatase, subunit ChlI M301_RS13290 PF13335 Magnesium chelatase, subunit ChlI C-terminal M301_RS13295 PF04380 Membrane fusogenic activity M301_RS13300 PF00543 Nitrogen regulatory protein P-II M301_RS13305 PF00909 Ammonium Transporter Family M301_RS13315 PF01553 Acyltransferase M301_RS13315 PF00501 AMP-binding enzyme M301_RS13340 PF07690 Major Facilitator Superfamily M301_RS13350 PF03562 MltA specific insert domain M301_RS13350 PF06725 3D domain M301_RS13355 PF04379 ApaG domain M301_RS13360 PF05690 Thiazole biosynthesis protein ThiG M301_RS13365 PF02597 ThiS family M301_RS13365 PF05690 Thiazole biosynthesis protein ThiG M301_RS13380 PF03466 LysR substrate binding domain M301_RS13380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS13390 PF01435 Peptidase family M48 M301_RS13395 PF03350 Uncharacterized protein family, UPF0114 M301_RS13400 PF01594 AI-2E family transporter M301_RS13405 PF03741 Integral membrane protein TerC family M301_RS13415 PF01381 Helix-turn-helix M301_RS13420 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M301_RS13420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M301_RS13435 PF03481 Putative GTP-binding controlling metal-binding M301_RS13435 PF01300 Telomere recombination M301_RS13445 PF13532 2OG-Fe(II) oxygenase superfamily M301_RS13450 PF03707 Bacterial signalling protein N terminal repeat M301_RS13450 PF00990 Diguanylate cyclase, GGDEF domain M301_RS13450 PF00563 EAL domain M301_RS13455 PF04324 BFD-like [2Fe-2S] binding domain M301_RS13455 PF01568 Molydopterin dinucleotide binding domain M301_RS13455 PF00384 Molybdopterin oxidoreductase M301_RS13455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M301_RS13465 PF03793 PASTA domain M301_RS13465 PF00069 Protein kinase domain M301_RS13470 PF07690 Major Facilitator Superfamily M301_RS13475 PF04324 BFD-like [2Fe-2S] binding domain M301_RS13475 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M301_RS13475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS13475 PF18267 Rubredoxin NAD+ reductase C-terminal domain M301_RS13475 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M301_RS13485 PF00005 ABC transporter M301_RS13490 PF00528 Binding-protein-dependent transport system inner membrane component M301_RS13500 PF08376 Nitrate and nitrite sensing M301_RS13500 PF03861 ANTAR domain M301_RS13505 PF13167 GTP-binding GTPase N-terminal M301_RS13505 PF01926 50S ribosome-binding GTPase M301_RS13505 PF16360 GTP-binding GTPase Middle Region M301_RS13515 PF00730 HhH-GPD superfamily base excision DNA repair protein M301_RS13525 PF00440 Bacterial regulatory proteins, tetR family M301_RS13545 PF05985 Ethanolamine ammonia-lyase light chain (EutC) M301_RS13550 PF06751 Ethanolamine ammonia lyase large subunit (EutB) M301_RS13590 PF00437 Type II/IV secretion system protein M301_RS13630 PF00005 ABC transporter M301_RS13645 PF02653 Branched-chain amino acid transport system / permease component M301_RS13650 PF12399 Branched-chain amino acid ATP-binding cassette transporter M301_RS13650 PF00005 ABC transporter M301_RS13660 PF00296 Luciferase-like monooxygenase M301_RS13665 PF03358 NADPH-dependent FMN reductase M301_RS13675 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M301_RS13675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M301_RS13680 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M301_RS13690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M301_RS13690 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M301_RS13695 PF00296 Luciferase-like monooxygenase M301_RS13700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M301_RS13700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M301_RS13705 PF00158 Sigma-54 interaction domain M301_RS13710 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M301_RS13710 PF00925 GTP cyclohydrolase II M301_RS13730 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M301_RS13745 PF02321 Outer membrane efflux protein M301_RS13755 PF00873 AcrB/AcrD/AcrF family M301_RS13765 PF02909 Tetracyclin repressor-like, C-terminal domain M301_RS13765 PF00440 Bacterial regulatory proteins, tetR family M301_RS13770 PF00892 EamA-like transporter family M301_RS13785 PF00884 Sulfatase M301_RS13785 PF08019 Phosphoethanolamine transferase EptA/EptB M301_RS13800 PF13667 ThiC-associated domain M301_RS13800 PF01964 Radical SAM ThiC family M301_RS13815 PF00916 Sulfate permease family M301_RS13815 PF01740 STAS domain M301_RS13820 PF00849 RNA pseudouridylate synthase M301_RS13820 PF01479 S4 domain M301_RS13830 PF02673 Bacitracin resistance protein BacA M301_RS13845 PF00633 Helix-hairpin-helix motif M301_RS13845 PF00730 HhH-GPD superfamily base excision DNA repair protein M301_RS13845 PF14815 NUDIX domain M301_RS13860 PF00376 MerR family regulatory protein M301_RS13860 PF09278 MerR, DNA binding M301_RS13870 PF01292 Prokaryotic cytochrome b561 M301_RS13900 PF13673 Acetyltransferase (GNAT) domain M301_RS13920 PF01208 Uroporphyrinogen decarboxylase (URO-D) M301_RS13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase M301_RS13925 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M301_RS13930 PF01493 GXGXG motif M301_RS13930 PF01645 Conserved region in glutamate synthase M301_RS13930 PF00310 Glutamine amidotransferases class-II M301_RS13930 PF04898 Glutamate synthase central domain M301_RS13935 PF00202 Aminotransferase class-III M301_RS13940 PF02581 Thiamine monophosphate synthase M301_RS13945 PF08543 Phosphomethylpyrimidine kinase M301_RS13955 PF03466 LysR substrate binding domain M301_RS13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M301_RS13965 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M301_RS13965 PF18074 Primosomal protein N C-terminal domain M301_RS13965 PF00270 DEAD/DEAH box helicase M301_RS13965 PF00271 Helicase conserved C-terminal domain M301_RS13965 PF17764 3′ DNA-binding domain (3′BD) M301_RS13970 PF00750 tRNA synthetases class I (R) M301_RS13970 PF03485 Arginyl tRNA synthetase N terminal domain M301_RS13970 PF05746 DALR anticodon binding domain M301_RS13980 PF01323 DSBA-like thioredoxin domain M301_RS13990 PF12848 ABC transporter M301_RS13990 PF00005 ABC transporter M301_RS13995 PF07152 YaeQ protein M301_RS14005 PF01380 SIS domain M301_RS14010 PF12804 MobA-like NTP transferase domain M301_RS14010 PF00132 Bacterial transferase hexapeptide (six repeats) M301_RS14015 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M301_RS14015 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M301_RS14020 PF02874 ATP synthase alpha/beta family, beta-barrel domain M301_RS14020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M301_RS14025 PF00231 ATP synthase M301_RS14030 PF02874 ATP synthase alpha/beta family, beta-barrel domain M301_RS14030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M301_RS14030 PF00306 ATP synthase alpha/beta chain, C terminal domain M301_RS14035 PF00213 ATP synthase delta (OSCP) subunit M301_RS14040 PF00430 ATP synthase B/B' CF(0) M301_RS14045 PF00137 ATP synthase subunit C M301_RS14050 PF00119 ATP synthase A chain M301_RS14060 PF02195 ParB-like nuclease domain M301_RS14060 PF17762 HTH domain found in ParB protein M301_RS14065 PF13614 AAA domain M301_RS14070 PF02527 rRNA small subunit methyltransferase G M301_RS14075 PF13932 GidA associated domain M301_RS14075 PF01134 Glucose inhibited division protein A M301_RS14080 PF09086 Domain of unknown function (DUF1924) M301_RS14085 PF07411 Domain of unknown function (DUF1508) M301_RS14090 PF01926 50S ribosome-binding GTPase M301_RS14090 PF10396 GTP-binding protein TrmE N-terminus M301_RS14090 PF12631 MnmE helical domain M301_RS14095 PF14849 YidC periplasmic domain M301_RS14095 PF02096 60Kd inner membrane protein M301_RS14100 PF01809 Putative membrane protein insertion efficiency factor M301_RS14105 PF00825 Ribonuclease P M301_RS14110 PF00468 Ribosomal protein L34 M301_RS14125 PF05987 Bacterial protein of unknown function (DUF898) M301_RS14130 PF08448 PAS fold M301_RS14130 PF08447 PAS fold M301_RS14130 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14130 PF00563 EAL domain M301_RS14160 PF00563 EAL domain M301_RS14160 PF08448 PAS fold M301_RS14160 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14170 PF00672 HAMP domain M301_RS14170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M301_RS14170 PF00512 His Kinase A (phospho-acceptor) domain M301_RS14170 PF00072 Response regulator receiver domain M301_RS14170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M301_RS14170 PF01627 Hpt domain M301_RS14180 PF00563 EAL domain M301_RS14180 PF03707 Bacterial signalling protein N terminal repeat M301_RS14180 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14205 PF00563 EAL domain M301_RS14205 PF03707 Bacterial signalling protein N terminal repeat M301_RS14205 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14235 PF03707 Bacterial signalling protein N terminal repeat M301_RS14235 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14235 PF00563 EAL domain M301_RS14240 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14240 PF00563 EAL domain M301_RS14240 PF03707 Bacterial signalling protein N terminal repeat M301_RS14265 PF03707 Bacterial signalling protein N terminal repeat M301_RS14265 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14265 PF00563 EAL domain M301_RS14280 PF03707 Bacterial signalling protein N terminal repeat M301_RS14280 PF00563 EAL domain M301_RS14280 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14285 PF00563 EAL domain M301_RS14285 PF03707 Bacterial signalling protein N terminal repeat M301_RS14285 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14310 PF00563 EAL domain M301_RS14310 PF03707 Bacterial signalling protein N terminal repeat M301_RS14310 PF00990 Diguanylate cyclase, GGDEF domain M301_RS14320 PF05567 Neisseria PilC beta-propeller domain M301_RS14325 PF07508 Recombinase M301_RS14325 PF13408 Recombinase zinc beta ribbon domain M301_RS14325 PF00239 Resolvase, N terminal domain M301_RS14330 PF13426 PAS domain M301_RS14330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M301_RS14330 PF08447 PAS fold