locus-tag class description MSIP34_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix MSIP34_RS00005 PF11638 DnaA N-terminal domain MSIP34_RS00005 PF00308 Bacterial dnaA protein MSIP34_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MSIP34_RS00010 PF02767 DNA polymerase III beta subunit, central domain MSIP34_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MSIP34_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus MSIP34_RS00015 PF18053 DNA gyrase B subunit insert domain MSIP34_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS00015 PF01751 Toprim domain MSIP34_RS00015 PF00204 DNA gyrase B MSIP34_RS00020 PF16360 GTP-binding GTPase Middle Region MSIP34_RS00020 PF13167 GTP-binding GTPase N-terminal MSIP34_RS00020 PF01926 50S ribosome-binding GTPase MSIP34_RS00035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MSIP34_RS00050 PF06039 Malate:quinone oxidoreductase (Mqo) MSIP34_RS00055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MSIP34_RS00055 PF00703 Glycosyl hydrolases family 2 MSIP34_RS00055 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 MSIP34_RS00055 PF16355 Domain of unknown function (DUF4982) MSIP34_RS00055 PF02837 Glycosyl hydrolases family 2, sugar binding domain MSIP34_RS00060 PF07690 Major Facilitator Superfamily MSIP34_RS00065 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS00065 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS00065 PF00563 EAL domain MSIP34_RS00075 PF13360 PQQ-like domain MSIP34_RS00080 PF00158 Sigma-54 interaction domain MSIP34_RS00080 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS00080 PF01590 GAF domain MSIP34_RS00090 PF03466 LysR substrate binding domain MSIP34_RS00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS00095 PF08042 PqqA family MSIP34_RS00115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MSIP34_RS00115 PF00289 Biotin carboxylase, N-terminal domain MSIP34_RS00115 PF02785 Biotin carboxylase C-terminal domain MSIP34_RS00120 PF00364 Biotin-requiring enzyme MSIP34_RS00125 PF01220 Dehydroquinase class II MSIP34_RS00130 PF00578 AhpC/TSA family MSIP34_RS00135 PF02683 Cytochrome C biogenesis protein transmembrane region MSIP34_RS00135 PF11412 Disulphide bond corrector protein DsbC MSIP34_RS00140 PF03091 CutA1 divalent ion tolerance protein MSIP34_RS00150 PF00970 Oxidoreductase FAD-binding domain MSIP34_RS00150 PF00111 2Fe-2S iron-sulfur cluster binding domain MSIP34_RS00150 PF00175 Oxidoreductase NAD-binding domain MSIP34_RS00160 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MSIP34_RS00165 PF02602 Uroporphyrinogen-III synthase HemD MSIP34_RS00170 PF03900 Porphobilinogen deaminase, C-terminal domain MSIP34_RS00170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MSIP34_RS00175 PF00072 Response regulator receiver domain MSIP34_RS00175 PF04397 LytTr DNA-binding domain MSIP34_RS00180 PF06580 Histidine kinase MSIP34_RS00180 PF07694 5TMR of 5TMR-LYT MSIP34_RS00180 PF13492 GAF domain MSIP34_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS00185 PF14698 Argininosuccinate lyase C-terminal MSIP34_RS00185 PF00206 Lyase MSIP34_RS00195 PF07238 PilZ domain MSIP34_RS00195 PF00535 Glycosyl transferase family 2 MSIP34_RS00195 PF03552 Cellulose synthase MSIP34_RS00210 PF01270 Glycosyl hydrolases family 8 MSIP34_RS00215 PF13181 Tetratricopeptide repeat MSIP34_RS00215 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) MSIP34_RS00220 PF06969 HemN C-terminal domain MSIP34_RS00220 PF04055 Radical SAM superfamily MSIP34_RS00230 PF01725 Ham1 family MSIP34_RS00235 PF03725 3' exoribonuclease family, domain 2 MSIP34_RS00235 PF01138 3' exoribonuclease family, domain 1 MSIP34_RS00245 PF00805 Pentapeptide repeats (8 copies) MSIP34_RS00245 PF00069 Protein kinase domain MSIP34_RS00250 PF08340 Domain of unknown function (DUF1732) MSIP34_RS00250 PF03755 YicC-like family, N-terminal region MSIP34_RS00255 PF00625 Guanylate kinase MSIP34_RS00260 PF01192 RNA polymerase Rpb6 MSIP34_RS00265 PF04607 Region found in RelA / SpoT proteins MSIP34_RS00265 PF02824 TGS domain MSIP34_RS00265 PF13291 ACT domain MSIP34_RS00270 PF01042 Endoribonuclease L-PSP MSIP34_RS00275 PF00271 Helicase conserved C-terminal domain MSIP34_RS00275 PF17191 RecG wedge domain MSIP34_RS00275 PF00270 DEAD/DEAH box helicase MSIP34_RS00280 PF04345 Chorismate lyase MSIP34_RS00285 PF01040 UbiA prenyltransferase family MSIP34_RS00290 PF00572 Ribosomal protein L13 MSIP34_RS00295 PF00380 Ribosomal protein S9/S16 MSIP34_RS00300 PF02774 Semialdehyde dehydrogenase, dimerisation domain MSIP34_RS00300 PF01118 Semialdehyde dehydrogenase, NAD binding domain MSIP34_RS00315 PF01521 Iron-sulphur cluster biosynthesis MSIP34_RS00320 PF00285 Citrate synthase, C-terminal domain MSIP34_RS00325 PF03702 Anhydro-N-acetylmuramic acid kinase MSIP34_RS00330 PF04225 Opacity-associated protein A LysM-like domain MSIP34_RS00330 PF01551 Peptidase family M23 MSIP34_RS00335 PF01479 S4 domain MSIP34_RS00335 PF00579 tRNA synthetases class I (W and Y) MSIP34_RS00365 PF17384 RimP C-terminal SH3 domain MSIP34_RS00365 PF02576 RimP N-terminal domain MSIP34_RS00370 PF13184 NusA-like KH domain MSIP34_RS00370 PF08529 NusA N-terminal domain MSIP34_RS00375 PF11987 Translation-initiation factor 2 MSIP34_RS00375 PF08364 Bacterial translation initiation factor IF-2 associated region MSIP34_RS00375 PF04760 Translation initiation factor IF-2, N-terminal region MSIP34_RS00375 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS00380 PF02033 Ribosome-binding factor A MSIP34_RS00385 PF09157 Pseudouridine synthase II TruB, C-terminal MSIP34_RS00385 PF16198 tRNA pseudouridylate synthase B C-terminal domain MSIP34_RS00385 PF01509 TruB family pseudouridylate synthase (N terminal domain) MSIP34_RS00390 PF00312 Ribosomal protein S15 MSIP34_RS00395 PF01138 3' exoribonuclease family, domain 1 MSIP34_RS00395 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MSIP34_RS00395 PF00013 KH domain MSIP34_RS00395 PF03725 3' exoribonuclease family, domain 2 MSIP34_RS00395 PF00575 S1 RNA binding domain MSIP34_RS00400 PF01258 Prokaryotic dksA/traR C4-type zinc finger MSIP34_RS00405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MSIP34_RS00405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MSIP34_RS00430 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS00430 PF00072 Response regulator receiver domain MSIP34_RS00430 PF00158 Sigma-54 interaction domain MSIP34_RS00435 PF01471 Putative peptidoglycan binding domain MSIP34_RS00435 PF13401 AAA domain MSIP34_RS00440 PF03958 Bacterial type II/III secretion system short domain MSIP34_RS00440 PF00263 Bacterial type II and III secretion system protein MSIP34_RS00450 PF00437 Type II/IV secretion system protein MSIP34_RS00450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MSIP34_RS00455 PF00482 Type II secretion system (T2SS), protein F MSIP34_RS00485 PF00899 ThiF family MSIP34_RS00495 PF16200 C-terminal region of band_7 MSIP34_RS00495 PF01145 SPFH domain / Band 7 family MSIP34_RS00505 PF00133 tRNA synthetases class I (I, L, M and V) MSIP34_RS00505 PF08264 Anticodon-binding domain of tRNA MSIP34_RS00505 PF10458 Valyl tRNA synthetase tRNA binding arm MSIP34_RS00515 PF01206 Sulfurtransferase TusA MSIP34_RS00520 PF00581 Rhodanese-like domain MSIP34_RS00525 PF02397 Bacterial sugar transferase MSIP34_RS00530 PF00158 Sigma-54 interaction domain MSIP34_RS00550 PF00005 ABC transporter MSIP34_RS00555 PF03544 Gram-negative bacterial TonB protein C-terminal MSIP34_RS00560 PF01618 MotA/TolQ/ExbB proton channel family MSIP34_RS00565 PF02472 Biopolymer transport protein ExbD/TolR MSIP34_RS00570 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS00595 PF05199 GMC oxidoreductase MSIP34_RS00595 PF00732 GMC oxidoreductase MSIP34_RS00600 PF00171 Aldehyde dehydrogenase family MSIP34_RS00610 PF00578 AhpC/TSA family MSIP34_RS00610 PF10417 C-terminal domain of 1-Cys peroxiredoxin MSIP34_RS00620 PF00664 ABC transporter transmembrane region MSIP34_RS00620 PF00005 ABC transporter MSIP34_RS00625 PF00005 ABC transporter MSIP34_RS00625 PF00664 ABC transporter transmembrane region MSIP34_RS00630 PF00593 TonB dependent receptor MSIP34_RS00630 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS00645 PF00881 Nitroreductase family MSIP34_RS00655 PF00296 Luciferase-like monooxygenase MSIP34_RS00660 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS00660 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS00660 PF00563 EAL domain MSIP34_RS00665 PF01370 NAD dependent epimerase/dehydratase family MSIP34_RS00675 PF00535 Glycosyl transferase family 2 MSIP34_RS00680 PF00535 Glycosyl transferase family 2 MSIP34_RS00705 PF02348 Cytidylyltransferase MSIP34_RS00710 PF03102 NeuB family MSIP34_RS00710 PF08666 SAF domain MSIP34_RS00715 PF00005 ABC transporter MSIP34_RS00715 PF00664 ABC transporter transmembrane region MSIP34_RS00725 PF02277 Phosphoribosyltransferase MSIP34_RS00730 PF02654 Cobalamin-5-phosphate synthase MSIP34_RS00750 PF00155 Aminotransferase class I and II MSIP34_RS00755 PF03186 CobD/Cbib protein MSIP34_RS00760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MSIP34_RS00760 PF07685 CobB/CobQ-like glutamine amidotransferase domain MSIP34_RS00770 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase MSIP34_RS00775 PF01497 Periplasmic binding protein MSIP34_RS00785 PF00881 Nitroreductase family MSIP34_RS00800 PF02514 CobN/Magnesium Chelatase MSIP34_RS00805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MSIP34_RS00805 PF07685 CobB/CobQ-like glutamine amidotransferase domain MSIP34_RS00810 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP MSIP34_RS00810 PF12557 Cob(I)alamin adenosyltransferase N terminal MSIP34_RS00820 PF00593 TonB dependent receptor MSIP34_RS00820 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS00830 PF00593 TonB dependent receptor MSIP34_RS00830 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS00840 PF05164 Cell division protein ZapA MSIP34_RS00865 PF00585 C-terminal regulatory domain of Threonine dehydratase MSIP34_RS00865 PF00291 Pyridoxal-phosphate dependent enzyme MSIP34_RS00870 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MSIP34_RS00875 PF01895 PhoU domain MSIP34_RS00880 PF02541 Ppx/GppA phosphatase family MSIP34_RS00885 PF17941 Polyphosphate kinase C-terminal domain 1 MSIP34_RS00885 PF13089 Polyphosphate kinase N-terminal domain MSIP34_RS00885 PF02503 Polyphosphate kinase middle domain MSIP34_RS00885 PF13090 Polyphosphate kinase C-terminal domain 2 MSIP34_RS00890 PF04362 Bacterial Fe(2+) trafficking MSIP34_RS00895 PF00593 TonB dependent receptor MSIP34_RS00895 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS00905 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MSIP34_RS00905 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MSIP34_RS00915 PF02899 Phage integrase, N-terminal SAM-like domain MSIP34_RS00915 PF00589 Phage integrase family MSIP34_RS00925 PF01678 Diaminopimelate epimerase MSIP34_RS00935 PF02773 S-adenosylmethionine synthetase, C-terminal domain MSIP34_RS00935 PF02772 S-adenosylmethionine synthetase, central domain MSIP34_RS00935 PF00438 S-adenosylmethionine synthetase, N-terminal domain MSIP34_RS00940 PF01966 HD domain MSIP34_RS00940 PF11871 Domain of unknown function (DUF3391) MSIP34_RS00945 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MSIP34_RS00945 PF05221 S-adenosyl-L-homocysteine hydrolase MSIP34_RS00950 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV MSIP34_RS00955 PF02219 Methylenetetrahydrofolate reductase MSIP34_RS00960 PF04361 Protein of unknown function (DUF494) MSIP34_RS00965 PF17782 DprA winged helix domain MSIP34_RS00965 PF02481 DNA recombination-mediator protein A MSIP34_RS00975 PF01327 Polypeptide deformylase MSIP34_RS00980 PF00551 Formyl transferase MSIP34_RS00980 PF02911 Formyl transferase, C-terminal domain MSIP34_RS00985 PF01435 Peptidase family M48 MSIP34_RS00990 PF01029 NusB family MSIP34_RS00990 PF01189 16S rRNA methyltransferase RsmB/F MSIP34_RS01000 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS01000 PF00989 PAS fold MSIP34_RS01000 PF00672 HAMP domain MSIP34_RS01005 PF00158 Sigma-54 interaction domain MSIP34_RS01005 PF00072 Response regulator receiver domain MSIP34_RS01005 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS01025 PF01432 Peptidase family M3 MSIP34_RS01035 PF05524 PEP-utilising enzyme, N-terminal MSIP34_RS01035 PF02896 PEP-utilising enzyme, TIM barrel domain MSIP34_RS01035 PF00391 PEP-utilising enzyme, mobile domain MSIP34_RS01040 PF00381 PTS HPr component phosphorylation site MSIP34_RS01050 PF03668 P-loop ATPase protein family MSIP34_RS01055 PF02603 HPr Serine kinase N terminus MSIP34_RS01055 PF07475 HPr Serine kinase C-terminal domain MSIP34_RS01060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MSIP34_RS01065 PF04552 Sigma-54, DNA binding domain MSIP34_RS01065 PF04963 Sigma-54 factor, core binding domain MSIP34_RS01065 PF00309 Sigma-54 factor, Activator interacting domain (AID) MSIP34_RS01070 PF00005 ABC transporter MSIP34_RS01070 PF12399 Branched-chain amino acid ATP-binding cassette transporter MSIP34_RS01075 PF03968 OstA-like protein MSIP34_RS01090 PF01380 SIS domain MSIP34_RS01090 PF00571 CBS domain MSIP34_RS01095 PF02254 TrkA-N domain MSIP34_RS01095 PF00999 Sodium/hydrogen exchanger family MSIP34_RS01095 PF02080 TrkA-C domain MSIP34_RS01100 PF01266 FAD dependent oxidoreductase MSIP34_RS01110 PF01967 MoaC family MSIP34_RS01115 PF01435 Peptidase family M48 MSIP34_RS01135 PF00578 AhpC/TSA family MSIP34_RS01135 PF10417 C-terminal domain of 1-Cys peroxiredoxin MSIP34_RS01140 PF13192 Thioredoxin domain MSIP34_RS01140 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS01150 PF00308 Bacterial dnaA protein MSIP34_RS01155 PF01594 AI-2E family transporter MSIP34_RS01160 PF00586 AIR synthase related protein, N-terminal domain MSIP34_RS01160 PF02769 AIR synthase related protein, C-terminal domain MSIP34_RS01175 PF01189 16S rRNA methyltransferase RsmB/F MSIP34_RS01175 PF01029 NusB family MSIP34_RS01180 PF00375 Sodium:dicarboxylate symporter family MSIP34_RS01185 PF00127 Copper binding proteins, plastocyanin/azurin family MSIP34_RS01195 PF01510 N-acetylmuramoyl-L-alanine amidase MSIP34_RS01205 PF00072 Response regulator receiver domain MSIP34_RS01205 PF00158 Sigma-54 interaction domain MSIP34_RS01205 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS01210 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS01245 PF03739 Lipopolysaccharide export system permease LptF/LptG MSIP34_RS01250 PF02789 Cytosol aminopeptidase family, N-terminal domain MSIP34_RS01250 PF00883 Cytosol aminopeptidase family, catalytic domain MSIP34_RS01265 PF01597 Glycine cleavage H-protein MSIP34_RS01270 PF00768 D-alanyl-D-alanine carboxypeptidase MSIP34_RS01275 PF13368 Topoisomerase C-terminal repeat MSIP34_RS01275 PF01751 Toprim domain MSIP34_RS01275 PF01131 DNA topoisomerase MSIP34_RS01280 PF01171 PP-loop family MSIP34_RS01295 PF02390 Putative methyltransferase MSIP34_RS01300 PF01926 50S ribosome-binding GTPase MSIP34_RS01305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MSIP34_RS01310 PF05140 ResB-like family MSIP34_RS01315 PF01578 Cytochrome C assembly protein MSIP34_RS01330 PF00005 ABC transporter MSIP34_RS01335 PF02405 Permease MlaE MSIP34_RS01340 PF02470 MlaD protein MSIP34_RS01345 PF05494 MlaC protein MSIP34_RS01355 PF00005 ABC transporter MSIP34_RS01360 PF01061 ABC-2 type transporter MSIP34_RS01365 PF01722 BolA-like protein MSIP34_RS01370 PF00462 Glutaredoxin MSIP34_RS01375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MSIP34_RS01380 PF01634 ATP phosphoribosyltransferase MSIP34_RS01385 PF00815 Histidinol dehydrogenase MSIP34_RS01390 PF00155 Aminotransferase class I and II MSIP34_RS01395 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MSIP34_RS01400 PF00475 Imidazoleglycerol-phosphate dehydratase MSIP34_RS01405 PF00117 Glutamine amidotransferase class-I MSIP34_RS01410 PF00977 Histidine biosynthesis protein MSIP34_RS01415 PF00977 Histidine biosynthesis protein MSIP34_RS01420 PF01502 Phosphoribosyl-AMP cyclohydrolase MSIP34_RS01425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MSIP34_RS01435 PF02416 mttA/Hcf106 family MSIP34_RS01440 PF02416 mttA/Hcf106 family MSIP34_RS01445 PF00902 Sec-independent protein translocase protein (TatC) MSIP34_RS01450 PF17820 PDZ domain MSIP34_RS01450 PF13180 PDZ domain MSIP34_RS01455 PF01784 NIF3 (NGG1p interacting factor 3) MSIP34_RS01460 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal MSIP34_RS01460 PF00355 Rieske [2Fe-2S] domain MSIP34_RS01465 PF00033 Cytochrome b/b6/petB MSIP34_RS01465 PF00032 Cytochrome b(C-terminal)/b6/petD MSIP34_RS01470 PF02167 Cytochrome C1 family MSIP34_RS01475 PF00043 Glutathione S-transferase, C-terminal domain MSIP34_RS01475 PF02798 Glutathione S-transferase, N-terminal domain MSIP34_RS01480 PF04386 Stringent starvation protein B MSIP34_RS01505 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS01505 PF03144 Elongation factor Tu domain 2 MSIP34_RS01505 PF03143 Elongation factor Tu C-terminal domain MSIP34_RS01515 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MSIP34_RS01520 PF02357 Transcription termination factor nusG MSIP34_RS01520 PF00467 KOW motif MSIP34_RS01525 PF00298 Ribosomal protein L11, RNA binding domain MSIP34_RS01525 PF03946 Ribosomal protein L11, N-terminal domain MSIP34_RS01530 PF00687 Ribosomal protein L1p/L10e family MSIP34_RS01535 PF00466 Ribosomal protein L10 MSIP34_RS01540 PF16320 Ribosomal protein L7/L12 dimerisation domain MSIP34_RS01540 PF00542 Ribosomal protein L7/L12 C-terminal domain MSIP34_RS01545 PF04563 RNA polymerase beta subunit MSIP34_RS01545 PF04561 RNA polymerase Rpb2, domain 2 MSIP34_RS01545 PF04565 RNA polymerase Rpb2, domain 3 MSIP34_RS01545 PF10385 RNA polymerase beta subunit external 1 domain MSIP34_RS01545 PF04560 RNA polymerase Rpb2, domain 7 MSIP34_RS01545 PF00562 RNA polymerase Rpb2, domain 6 MSIP34_RS01550 PF04983 RNA polymerase Rpb1, domain 3 MSIP34_RS01550 PF05000 RNA polymerase Rpb1, domain 4 MSIP34_RS01550 PF04998 RNA polymerase Rpb1, domain 5 MSIP34_RS01550 PF00623 RNA polymerase Rpb1, domain 2 MSIP34_RS01550 PF04997 RNA polymerase Rpb1, domain 1 MSIP34_RS01555 PF00164 Ribosomal protein S12/S23 MSIP34_RS01560 PF00177 Ribosomal protein S7p/S5e MSIP34_RS01565 PF03764 Elongation factor G, domain IV MSIP34_RS01565 PF03144 Elongation factor Tu domain 2 MSIP34_RS01565 PF14492 Elongation Factor G, domain II MSIP34_RS01565 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS01565 PF00679 Elongation factor G C-terminus MSIP34_RS01570 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS01570 PF03144 Elongation factor Tu domain 2 MSIP34_RS01570 PF03143 Elongation factor Tu C-terminal domain MSIP34_RS01575 PF00338 Ribosomal protein S10p/S20e MSIP34_RS01580 PF00297 Ribosomal protein L3 MSIP34_RS01585 PF00573 Ribosomal protein L4/L1 family MSIP34_RS01590 PF00276 Ribosomal protein L23 MSIP34_RS01595 PF00181 Ribosomal Proteins L2, RNA binding domain MSIP34_RS01595 PF03947 Ribosomal Proteins L2, C-terminal domain MSIP34_RS01600 PF00203 Ribosomal protein S19 MSIP34_RS01605 PF00237 Ribosomal protein L22p/L17e MSIP34_RS01610 PF07650 KH domain MSIP34_RS01610 PF00189 Ribosomal protein S3, C-terminal domain MSIP34_RS01615 PF00252 Ribosomal protein L16p/L10e MSIP34_RS01620 PF00831 Ribosomal L29 protein MSIP34_RS01625 PF00366 Ribosomal protein S17 MSIP34_RS01630 PF00238 Ribosomal protein L14p/L23e MSIP34_RS01635 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MSIP34_RS01640 PF00281 Ribosomal protein L5 MSIP34_RS01640 PF00673 ribosomal L5P family C-terminus MSIP34_RS01645 PF00253 Ribosomal protein S14p/S29e MSIP34_RS01650 PF00410 Ribosomal protein S8 MSIP34_RS01655 PF00347 Ribosomal protein L6 MSIP34_RS01660 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MSIP34_RS01665 PF00333 Ribosomal protein S5, N-terminal domain MSIP34_RS01665 PF03719 Ribosomal protein S5, C-terminal domain MSIP34_RS01670 PF00327 Ribosomal protein L30p/L7e MSIP34_RS01675 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MSIP34_RS01680 PF00344 SecY translocase MSIP34_RS01685 PF01176 Translation initiation factor 1A / IF-1 MSIP34_RS01690 PF00416 Ribosomal protein S13/S18 MSIP34_RS01695 PF00411 Ribosomal protein S11 MSIP34_RS01700 PF00163 Ribosomal protein S4/S9 N-terminal domain MSIP34_RS01700 PF01479 S4 domain MSIP34_RS01705 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MSIP34_RS01705 PF01000 RNA polymerase Rpb3/RpoA insert domain MSIP34_RS01705 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MSIP34_RS01710 PF01196 Ribosomal protein L17 MSIP34_RS01720 PF03448 MgtE intracellular N domain MSIP34_RS01720 PF01769 Divalent cation transporter MSIP34_RS01720 PF00571 CBS domain MSIP34_RS01725 PF12794 Mechanosensitive ion channel inner membrane domain 1 MSIP34_RS01725 PF12795 Mechanosensitive ion channel porin domain MSIP34_RS01725 PF00924 Mechanosensitive ion channel MSIP34_RS01735 PF00471 Ribosomal protein L33 MSIP34_RS01740 PF00830 Ribosomal L28 family MSIP34_RS01745 PF00692 dUTPase MSIP34_RS01750 PF04127 DNA / pantothenate metabolism flavoprotein MSIP34_RS01750 PF02441 Flavoprotein MSIP34_RS01760 PF04002 RadC-like JAB domain MSIP34_RS01765 PF08379 Bacterial transglutaminase-like N-terminal region MSIP34_RS01765 PF01841 Transglutaminase-like superfamily MSIP34_RS01770 PF14403 Circularly permuted ATP-grasp type 2 MSIP34_RS01770 PF04168 A predicted alpha-helical domain with a conserved ER motif. MSIP34_RS01785 PF04324 BFD-like [2Fe-2S] binding domain MSIP34_RS01785 PF01568 Molydopterin dinucleotide binding domain MSIP34_RS01785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MSIP34_RS01785 PF00384 Molybdopterin oxidoreductase MSIP34_RS01795 PF03793 PASTA domain MSIP34_RS01795 PF00069 Protein kinase domain MSIP34_RS01800 PF07690 Major Facilitator Superfamily MSIP34_RS01805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MSIP34_RS01805 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MSIP34_RS01805 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS01805 PF04324 BFD-like [2Fe-2S] binding domain MSIP34_RS01805 PF18267 Rubredoxin NAD+ reductase C-terminal domain MSIP34_RS01810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MSIP34_RS01815 PF02743 Cache domain MSIP34_RS01815 PF00672 HAMP domain MSIP34_RS01815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS01825 PF00005 ABC transporter MSIP34_RS01830 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS01840 PF03861 ANTAR domain MSIP34_RS01840 PF08376 Nitrate and nitrite sensing MSIP34_RS01850 PF00664 ABC transporter transmembrane region MSIP34_RS01850 PF00005 ABC transporter MSIP34_RS01855 PF05433 Glycine zipper 2TM domain MSIP34_RS01860 PF13722 5TM C-terminal transporter carbon starvation CstA MSIP34_RS01860 PF02554 Carbon starvation protein CstA MSIP34_RS01900 PF01790 Prolipoprotein diacylglyceryl transferase MSIP34_RS01905 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS01905 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS01905 PF00563 EAL domain MSIP34_RS01910 PF00920 Dehydratase family MSIP34_RS01915 PF01263 Aldose 1-epimerase MSIP34_RS01925 PF01042 Endoribonuclease L-PSP MSIP34_RS01930 PF13520 Amino acid permease MSIP34_RS01935 PF01235 Sodium:alanine symporter family MSIP34_RS01940 PF01218 Coproporphyrinogen III oxidase MSIP34_RS01945 PF01300 Telomere recombination MSIP34_RS01950 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MSIP34_RS01950 PF02844 Phosphoribosylglycinamide synthetase, N domain MSIP34_RS01950 PF02843 Phosphoribosylglycinamide synthetase, C domain MSIP34_RS01955 PF01808 AICARFT/IMPCHase bienzyme MSIP34_RS01955 PF02142 MGS-like domain MSIP34_RS01960 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS01965 PF01207 Dihydrouridine synthase (Dus) MSIP34_RS01970 PF00083 Sugar (and other) transporter MSIP34_RS01970 PF07690 Major Facilitator Superfamily MSIP34_RS01975 PF03692 Putative zinc- or iron-chelating domain MSIP34_RS01980 PF02464 Competence-damaged protein MSIP34_RS01980 PF18146 Damage-inducible protein CinA KH domain MSIP34_RS01980 PF00994 Probable molybdopterin binding domain MSIP34_RS01990 PF00476 DNA polymerase family A MSIP34_RS01990 PF01612 3'-5' exonuclease MSIP34_RS01990 PF01367 5'-3' exonuclease, C-terminal SAM fold MSIP34_RS01990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MSIP34_RS01995 PF03641 Possible lysine decarboxylase MSIP34_RS02005 PF01636 Phosphotransferase enzyme family MSIP34_RS02015 PF13361 UvrD-like helicase C-terminal domain MSIP34_RS02015 PF00580 UvrD/REP helicase N-terminal domain MSIP34_RS02020 PF00691 OmpA family MSIP34_RS02025 PF17152 Periplasmic sensor domain MSIP34_RS02025 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS02035 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS02035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS02035 PF00672 HAMP domain MSIP34_RS02040 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS02040 PF00072 Response regulator receiver domain MSIP34_RS02050 PF07731 Multicopper oxidase MSIP34_RS02050 PF07732 Multicopper oxidase MSIP34_RS02060 PF00118 TCP-1/cpn60 chaperonin family MSIP34_RS02065 PF00166 Chaperonin 10 Kd subunit MSIP34_RS02070 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS02070 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS02070 PF00563 EAL domain MSIP34_RS02095 PF00155 Aminotransferase class I and II MSIP34_RS02095 PF00392 Bacterial regulatory proteins, gntR family MSIP34_RS02100 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MSIP34_RS02100 PF12801 4Fe-4S binding domain MSIP34_RS02100 PF13746 4Fe-4S dicluster domain MSIP34_RS02115 PF00563 EAL domain MSIP34_RS02115 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS02115 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS02120 PF00989 PAS fold MSIP34_RS02120 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS02125 PF00593 TonB dependent receptor MSIP34_RS02125 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS02155 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS02155 PF00593 TonB dependent receptor MSIP34_RS02180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS02185 PF00005 ABC transporter MSIP34_RS02185 PF02687 FtsX-like permease family MSIP34_RS02185 PF12704 MacB-like periplasmic core domain MSIP34_RS02190 PF02321 Outer membrane efflux protein MSIP34_RS02200 PF00202 Aminotransferase class-III MSIP34_RS02205 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MSIP34_RS02210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MSIP34_RS02215 PF02566 OsmC-like protein MSIP34_RS02225 PF07660 Secretin and TonB N terminus short domain MSIP34_RS02225 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS02225 PF00593 TonB dependent receptor MSIP34_RS02235 PF03232 Ubiquinone biosynthesis protein COQ7 MSIP34_RS02240 PF13180 PDZ domain MSIP34_RS02240 PF03572 Peptidase family S41 MSIP34_RS02255 PF00877 NlpC/P60 family MSIP34_RS02265 PF03109 ABC1 family MSIP34_RS02270 PF14403 Circularly permuted ATP-grasp type 2 MSIP34_RS02275 PF14403 Circularly permuted ATP-grasp type 2 MSIP34_RS02275 PF04168 A predicted alpha-helical domain with a conserved ER motif. MSIP34_RS02280 PF01841 Transglutaminase-like superfamily MSIP34_RS02280 PF08379 Bacterial transglutaminase-like N-terminal region MSIP34_RS02290 PF12392 Collagenase MSIP34_RS02290 PF01136 Peptidase family U32 MSIP34_RS02300 PF02381 MraZ protein, putative antitoxin-like MSIP34_RS02305 PF01795 MraW methylase family MSIP34_RS02310 PF04999 Cell division protein FtsL MSIP34_RS02315 PF00905 Penicillin binding protein transpeptidase domain MSIP34_RS02315 PF03717 Penicillin-binding Protein dimerisation domain MSIP34_RS02320 PF08245 Mur ligase middle domain MSIP34_RS02320 PF02875 Mur ligase family, glutamate ligase domain MSIP34_RS02320 PF01225 Mur ligase family, catalytic domain MSIP34_RS02325 PF08245 Mur ligase middle domain MSIP34_RS02325 PF02875 Mur ligase family, glutamate ligase domain MSIP34_RS02325 PF01225 Mur ligase family, catalytic domain MSIP34_RS02330 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MSIP34_RS02330 PF00953 Glycosyl transferase family 4 MSIP34_RS02335 PF02875 Mur ligase family, glutamate ligase domain MSIP34_RS02335 PF08245 Mur ligase middle domain MSIP34_RS02340 PF01098 Cell cycle protein MSIP34_RS02345 PF03033 Glycosyltransferase family 28 N-terminal domain MSIP34_RS02345 PF04101 Glycosyltransferase family 28 C-terminal domain MSIP34_RS02350 PF02875 Mur ligase family, glutamate ligase domain MSIP34_RS02350 PF01225 Mur ligase family, catalytic domain MSIP34_RS02350 PF08245 Mur ligase middle domain MSIP34_RS02355 PF01565 FAD binding domain MSIP34_RS02355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MSIP34_RS02360 PF07478 D-ala D-ala ligase C-terminus MSIP34_RS02360 PF01820 D-ala D-ala ligase N-terminus MSIP34_RS02365 PF08478 POTRA domain, FtsQ-type MSIP34_RS02365 PF03799 Cell division protein FtsQ MSIP34_RS02370 PF02491 SHS2 domain inserted in FTSA MSIP34_RS02375 PF00091 Tubulin/FtsZ family, GTPase domain MSIP34_RS02375 PF12327 FtsZ family, C-terminal domain MSIP34_RS02380 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MSIP34_RS02390 PF01464 Transglycosylase SLT domain MSIP34_RS02390 PF01551 Peptidase family M23 MSIP34_RS02390 PF10145 Phage-related minor tail protein MSIP34_RS02400 PF01743 Poly A polymerase head domain MSIP34_RS02400 PF01966 HD domain MSIP34_RS02400 PF12627 Probable RNA and SrmB- binding site of polymerase A MSIP34_RS02410 PF00440 Bacterial regulatory proteins, tetR family MSIP34_RS02420 PF00696 Amino acid kinase family MSIP34_RS02425 PF01268 Formate--tetrahydrofolate ligase MSIP34_RS02430 PF00011 Hsp20/alpha crystallin family MSIP34_RS02435 PF00583 Acetyltransferase (GNAT) family MSIP34_RS02435 PF00696 Amino acid kinase family MSIP34_RS02440 PF01566 Natural resistance-associated macrophage protein MSIP34_RS02445 PF04452 RNA methyltransferase MSIP34_RS02455 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS02460 PF00456 Transketolase, thiamine diphosphate binding domain MSIP34_RS02460 PF02780 Transketolase, C-terminal domain MSIP34_RS02460 PF02779 Transketolase, pyrimidine binding domain MSIP34_RS02465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MSIP34_RS02465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MSIP34_RS02470 PF00162 Phosphoglycerate kinase MSIP34_RS02475 PF00224 Pyruvate kinase, barrel domain MSIP34_RS02475 PF02887 Pyruvate kinase, alpha/beta domain MSIP34_RS02480 PF01116 Fructose-bisphosphate aldolase class-II MSIP34_RS02490 PF01259 SAICAR synthetase MSIP34_RS02495 PF00484 Carbonic anhydrase MSIP34_RS02500 PF00719 Inorganic pyrophosphatase MSIP34_RS02505 PF03167 Uracil DNA glycosylase superfamily MSIP34_RS02515 PF00005 ABC transporter MSIP34_RS02520 PF01925 Sulfite exporter TauE/SafE MSIP34_RS02530 PF01551 Peptidase family M23 MSIP34_RS02535 PF07516 SecA Wing and Scaffold domain MSIP34_RS02535 PF02810 SEC-C motif MSIP34_RS02535 PF01043 SecA preprotein cross-linking domain MSIP34_RS02535 PF07517 SecA DEAD-like domain MSIP34_RS02540 PF00909 Ammonium Transporter Family MSIP34_RS02555 PF01960 ArgJ family MSIP34_RS02565 PF00293 NUDIX domain MSIP34_RS02575 PF04314 Copper chaperone PCu(A)C MSIP34_RS02580 PF03884 DNA gyrase inhibitor YacG MSIP34_RS02585 PF07072 Cell division protein MSIP34_RS02590 PF01121 Dephospho-CoA kinase MSIP34_RS02595 PF01478 Type IV leader peptidase family MSIP34_RS02595 PF06750 Bacterial Peptidase A24 N-terminal domain MSIP34_RS02605 PF00348 Polyprenyl synthetase MSIP34_RS02610 PF00829 Ribosomal prokaryotic L21 protein MSIP34_RS02615 PF01016 Ribosomal L27 protein MSIP34_RS02620 PF01018 GTP1/OBG MSIP34_RS02620 PF01926 50S ribosome-binding GTPase MSIP34_RS02625 PF00696 Amino acid kinase family MSIP34_RS02625 PF01472 PUA domain MSIP34_RS02630 PF00731 AIR carboxylase MSIP34_RS02635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MSIP34_RS02635 PF02222 ATP-grasp domain MSIP34_RS02640 PF01649 Ribosomal protein S20 MSIP34_RS02645 PF03023 Lipid II flippase MurJ MSIP34_RS02650 PF01687 Riboflavin kinase MSIP34_RS02650 PF06574 FAD synthetase MSIP34_RS02655 PF08264 Anticodon-binding domain of tRNA MSIP34_RS02655 PF00133 tRNA synthetases class I (I, L, M and V) MSIP34_RS02655 PF06827 Zinc finger found in FPG and IleRS MSIP34_RS02660 PF01252 Signal peptidase (SPase) II MSIP34_RS02665 PF00174 Oxidoreductase molybdopterin binding domain MSIP34_RS02670 PF01641 SelR domain MSIP34_RS02675 PF05661 Protein of unknown function (DUF808) MSIP34_RS02680 PF00107 Zinc-binding dehydrogenase MSIP34_RS02680 PF08240 Alcohol dehydrogenase GroES-like domain MSIP34_RS02695 PF06628 Catalase-related immune-responsive MSIP34_RS02695 PF00199 Catalase MSIP34_RS02705 PF02322 Cytochrome bd terminal oxidase subunit II MSIP34_RS02710 PF01654 Cytochrome bd terminal oxidase subunit I MSIP34_RS02720 PF00072 Response regulator receiver domain MSIP34_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS02725 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS02750 PF01966 HD domain MSIP34_RS02750 PF11871 Domain of unknown function (DUF3391) MSIP34_RS02755 PF00563 EAL domain MSIP34_RS02755 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS02755 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS02760 PF07724 AAA domain (Cdc48 subfamily) MSIP34_RS02760 PF00004 ATPase family associated with various cellular activities (AAA) MSIP34_RS02760 PF10431 C-terminal, D2-small domain, of ClpB protein MSIP34_RS02760 PF17871 AAA lid domain MSIP34_RS02760 PF02861 Clp amino terminal domain, pathogenicity island component MSIP34_RS02765 PF05368 NmrA-like family MSIP34_RS02770 PF01638 HxlR-like helix-turn-helix MSIP34_RS02775 PF01464 Transglycosylase SLT domain MSIP34_RS02775 PF00497 Bacterial extracellular solute-binding proteins, family 3 MSIP34_RS02785 PF01894 Uncharacterised protein family UPF0047 MSIP34_RS02790 PF00465 Iron-containing alcohol dehydrogenase MSIP34_RS02795 PF13439 Glycosyltransferase Family 4 MSIP34_RS02795 PF00534 Glycosyl transferases group 1 MSIP34_RS02800 PF01551 Peptidase family M23 MSIP34_RS02805 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MSIP34_RS02805 PF01676 Metalloenzyme superfamily MSIP34_RS02810 PF00581 Rhodanese-like domain MSIP34_RS02815 PF00462 Glutaredoxin MSIP34_RS02820 PF02556 Preprotein translocase subunit SecB MSIP34_RS02830 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MSIP34_RS02830 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MSIP34_RS02835 PF00588 SpoU rRNA Methylase family MSIP34_RS02855 PF01740 STAS domain MSIP34_RS02855 PF00916 Sulfate permease family MSIP34_RS02860 PF00156 Phosphoribosyl transferase domain MSIP34_RS02870 PF06968 Biotin and Thiamin Synthesis associated domain MSIP34_RS02870 PF04055 Radical SAM superfamily MSIP34_RS02875 PF00155 Aminotransferase class I and II MSIP34_RS02880 PF00561 alpha/beta hydrolase fold MSIP34_RS02885 PF08241 Methyltransferase domain MSIP34_RS02900 PF01467 Cytidylyltransferase-like MSIP34_RS02905 PF00171 Aldehyde dehydrogenase family MSIP34_RS02920 PF08264 Anticodon-binding domain of tRNA MSIP34_RS02920 PF09334 tRNA synthetases class I (M) MSIP34_RS02920 PF00133 tRNA synthetases class I (I, L, M and V) MSIP34_RS02920 PF13603 Leucyl-tRNA synthetase, Domain 2 MSIP34_RS02925 PF05191 Adenylate kinase, active site lid MSIP34_RS02930 PF00398 Ribosomal RNA adenine dimethylase MSIP34_RS02935 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MSIP34_RS02940 PF00639 PPIC-type PPIASE domain MSIP34_RS02940 PF09312 SurA N-terminal domain MSIP34_RS02945 PF04453 LPS transport system D MSIP34_RS02950 PF01636 Phosphotransferase enzyme family MSIP34_RS02955 PF00483 Nucleotidyl transferase MSIP34_RS02960 PF00557 Metallopeptidase family M24 MSIP34_RS02960 PF05195 Aminopeptidase P, N-terminal domain MSIP34_RS02965 PF01494 FAD binding domain MSIP34_RS02970 PF01494 FAD binding domain MSIP34_RS02975 PF10411 Disulfide bond isomerase protein N-terminus MSIP34_RS02975 PF13098 Thioredoxin-like domain MSIP34_RS02980 PF00482 Type II secretion system (T2SS), protein F MSIP34_RS02985 PF00437 Type II/IV secretion system protein MSIP34_RS02985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MSIP34_RS02990 PF00313 'Cold-shock' DNA-binding domain MSIP34_RS02995 PF00180 Isocitrate/isopropylmalate dehydrogenase MSIP34_RS03000 PF00849 RNA pseudouridylate synthase MSIP34_RS03005 PF02540 NAD synthase MSIP34_RS03005 PF00958 GMP synthase C terminal domain MSIP34_RS03005 PF00117 Glutamine amidotransferase class-I MSIP34_RS03010 PF01264 Chorismate synthase MSIP34_RS03015 PF03825 Nucleoside H+ symporter MSIP34_RS03025 PF02649 Type I GTP cyclohydrolase folE2 MSIP34_RS03030 PF02780 Transketolase, C-terminal domain MSIP34_RS03030 PF02779 Transketolase, pyrimidine binding domain MSIP34_RS03030 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MSIP34_RS03035 PF00348 Polyprenyl synthetase MSIP34_RS03040 PF02609 Exonuclease VII small subunit MSIP34_RS03050 PF02230 Phospholipase/Carboxylesterase MSIP34_RS03055 PF12706 Beta-lactamase superfamily domain MSIP34_RS03060 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS03060 PF00114 Pilin (bacterial filament) MSIP34_RS03070 PF01436 NHL repeat MSIP34_RS03070 PF00934 PE family MSIP34_RS03075 PF00293 NUDIX domain MSIP34_RS03080 PF02666 Phosphatidylserine decarboxylase MSIP34_RS03085 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MSIP34_RS03085 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MSIP34_RS03090 PF10369 Small subunit of acetolactate synthase MSIP34_RS03095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MSIP34_RS03095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MSIP34_RS03095 PF00205 Thiamine pyrophosphate enzyme, central domain MSIP34_RS03100 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MSIP34_RS03100 PF00437 Type II/IV secretion system protein MSIP34_RS03105 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MSIP34_RS03105 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MSIP34_RS03110 PF00043 Glutathione S-transferase, C-terminal domain MSIP34_RS03110 PF13417 Glutathione S-transferase, N-terminal domain MSIP34_RS03120 PF00293 NUDIX domain MSIP34_RS03125 PF01914 MarC family integral membrane protein MSIP34_RS03130 PF01965 DJ-1/PfpI family MSIP34_RS03135 PF02545 Maf-like protein MSIP34_RS03140 PF00575 S1 RNA binding domain MSIP34_RS03140 PF10150 Ribonuclease E/G family MSIP34_RS03145 PF02325 YGGT family MSIP34_RS03150 PF14748 Pyrroline-5-carboxylate reductase dimerisation MSIP34_RS03150 PF03807 NADP oxidoreductase coenzyme F420-dependent MSIP34_RS03155 PF01168 Alanine racemase, N-terminal domain MSIP34_RS03160 PF00437 Type II/IV secretion system protein MSIP34_RS03165 PF00437 Type II/IV secretion system protein MSIP34_RS03175 PF01979 Amidohydrolase family MSIP34_RS03180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MSIP34_RS03180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MSIP34_RS03185 PF00156 Phosphoribosyl transferase domain MSIP34_RS03190 PF03652 Holliday junction resolvase MSIP34_RS03195 PF02622 Uncharacterized ACR, COG1678 MSIP34_RS03200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MSIP34_RS03200 PF00925 GTP cyclohydrolase II MSIP34_RS03205 PF00677 Lumazine binding domain MSIP34_RS03210 PF02687 FtsX-like permease family MSIP34_RS03210 PF12704 MacB-like periplasmic core domain MSIP34_RS03215 PF00005 ABC transporter MSIP34_RS03220 PF03772 Competence protein MSIP34_RS03220 PF00753 Metallo-beta-lactamase superfamily MSIP34_RS03225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MSIP34_RS03225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MSIP34_RS03230 PF01618 MotA/TolQ/ExbB proton channel family MSIP34_RS03235 PF02472 Biopolymer transport protein ExbD/TolR MSIP34_RS03240 PF00005 ABC transporter MSIP34_RS03240 PF00664 ABC transporter transmembrane region MSIP34_RS03245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MSIP34_RS03250 PF03966 Trm112p-like protein MSIP34_RS03255 PF02348 Cytidylyltransferase MSIP34_RS03290 PF00128 Alpha amylase, catalytic domain MSIP34_RS03290 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MSIP34_RS03295 PF13614 AAA domain MSIP34_RS03300 PF01625 Peptide methionine sulfoxide reductase MSIP34_RS03305 PF01544 CorA-like Mg2+ transporter protein MSIP34_RS03310 PF00291 Pyridoxal-phosphate dependent enzyme MSIP34_RS03320 PF01613 Flavin reductase like domain MSIP34_RS03325 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MSIP34_RS03325 PF00749 tRNA synthetases class I (E and Q), catalytic domain MSIP34_RS03330 PF03099 Biotin/lipoate A/B protein ligase family MSIP34_RS03330 PF02237 Biotin protein ligase C terminal domain MSIP34_RS03330 PF08279 HTH domain MSIP34_RS03335 PF03309 Type III pantothenate kinase MSIP34_RS03355 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS03355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MSIP34_RS03360 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MSIP34_RS03360 PF02817 e3 binding domain MSIP34_RS03360 PF00364 Biotin-requiring enzyme MSIP34_RS03365 PF00456 Transketolase, thiamine diphosphate binding domain MSIP34_RS03365 PF17831 Pyruvate dehydrogenase E1 component middle domain MSIP34_RS03370 PF02789 Cytosol aminopeptidase family, N-terminal domain MSIP34_RS03370 PF00883 Cytosol aminopeptidase family, catalytic domain MSIP34_RS03410 PF17768 RecJ OB domain MSIP34_RS03410 PF02272 DHHA1 domain MSIP34_RS03410 PF01368 DHH family MSIP34_RS03415 PF00121 Triosephosphate isomerase MSIP34_RS03420 PF03840 Preprotein translocase SecG subunit MSIP34_RS03430 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 MSIP34_RS03435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MSIP34_RS03440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MSIP34_RS03445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MSIP34_RS03455 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MSIP34_RS03455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MSIP34_RS03455 PF10531 SLBB domain MSIP34_RS03460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MSIP34_RS03460 PF00384 Molybdopterin oxidoreductase MSIP34_RS03460 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal MSIP34_RS03465 PF00146 NADH dehydrogenase MSIP34_RS03470 PF12838 4Fe-4S dicluster domain MSIP34_RS03475 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 MSIP34_RS03480 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MSIP34_RS03485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MSIP34_RS03485 PF00361 Proton-conducting membrane transporter MSIP34_RS03490 PF00361 Proton-conducting membrane transporter MSIP34_RS03490 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus MSIP34_RS03495 PF00361 Proton-conducting membrane transporter MSIP34_RS03515 PF00293 NUDIX domain MSIP34_RS03525 PF00282 Pyridoxal-dependent decarboxylase conserved domain MSIP34_RS03560 PF03069 Acetamidase/Formamidase family MSIP34_RS03565 PF09723 Zinc ribbon domain MSIP34_RS03585 PF00005 ABC transporter MSIP34_RS03585 PF12399 Branched-chain amino acid ATP-binding cassette transporter MSIP34_RS03590 PF00005 ABC transporter MSIP34_RS03595 PF01774 UreD urease accessory protein MSIP34_RS03600 PF00547 Urease, gamma subunit MSIP34_RS03605 PF00699 Urease beta subunit MSIP34_RS03610 PF01979 Amidohydrolase family MSIP34_RS03610 PF00449 Urease alpha-subunit, N-terminal domain MSIP34_RS03615 PF02814 UreE urease accessory protein, N-terminal domain MSIP34_RS03615 PF05194 UreE urease accessory protein, C-terminal domain MSIP34_RS03620 PF01730 UreF MSIP34_RS03625 PF02492 CobW/HypB/UreG, nucleotide-binding domain MSIP34_RS03630 PF04955 HupE / UreJ protein MSIP34_RS03635 PF00072 Response regulator receiver domain MSIP34_RS03635 PF01627 Hpt domain MSIP34_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS03635 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS03640 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS03640 PF00072 Response regulator receiver domain MSIP34_RS03645 PF03793 PASTA domain MSIP34_RS03645 PF00069 Protein kinase domain MSIP34_RS03670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MSIP34_RS03670 PF03129 Anticodon binding domain MSIP34_RS03670 PF02824 TGS domain MSIP34_RS03670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MSIP34_RS03675 PF00707 Translation initiation factor IF-3, C-terminal domain MSIP34_RS03675 PF05198 Translation initiation factor IF-3, N-terminal domain MSIP34_RS03680 PF01632 Ribosomal protein L35 MSIP34_RS03685 PF00453 Ribosomal protein L20 MSIP34_RS03690 PF01409 tRNA synthetases class II core domain (F) MSIP34_RS03690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MSIP34_RS03695 PF03484 tRNA synthetase B5 domain MSIP34_RS03695 PF03483 B3/4 domain MSIP34_RS03695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MSIP34_RS03695 PF01588 Putative tRNA binding domain MSIP34_RS03695 PF03147 Ferredoxin-fold anticodon binding domain MSIP34_RS03700 PF00216 Bacterial DNA-binding protein MSIP34_RS03715 PF00593 TonB dependent receptor MSIP34_RS03715 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS03720 PF00270 DEAD/DEAH box helicase MSIP34_RS03720 PF00271 Helicase conserved C-terminal domain MSIP34_RS03720 PF17191 RecG wedge domain MSIP34_RS03725 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MSIP34_RS03725 PF00437 Type II/IV secretion system protein MSIP34_RS03730 PF07690 Major Facilitator Superfamily MSIP34_RS03735 PF00672 HAMP domain MSIP34_RS03735 PF16448 LapD/MoxY periplasmic domain MSIP34_RS03735 PF07730 Histidine kinase MSIP34_RS03740 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS03740 PF00072 Response regulator receiver domain MSIP34_RS03745 PF00072 Response regulator receiver domain MSIP34_RS03745 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS03750 PF07730 Histidine kinase MSIP34_RS03750 PF05231 MASE1 MSIP34_RS03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS03755 PF13360 PQQ-like domain MSIP34_RS03760 PF00497 Bacterial extracellular solute-binding proteins, family 3 MSIP34_RS03765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MSIP34_RS03770 PF02315 Methanol dehydrogenase beta subunit MSIP34_RS03775 PF07726 ATPase family associated with various cellular activities (AAA) MSIP34_RS03775 PF17863 AAA lid domain MSIP34_RS03810 PF07730 Histidine kinase MSIP34_RS03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS03810 PF05231 MASE1 MSIP34_RS03815 PF00072 Response regulator receiver domain MSIP34_RS03815 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS03825 PF00700 Bacterial flagellin C-terminal helical region MSIP34_RS03825 PF00669 Bacterial flagellin N-terminal helical region MSIP34_RS03835 PF02465 Flagellar hook-associated protein 2 N-terminus MSIP34_RS03835 PF07195 Flagellar hook-associated protein 2 C-terminus MSIP34_RS03840 PF02561 Flagellar protein FliS MSIP34_RS03855 PF01312 FlhB HrpN YscU SpaS Family MSIP34_RS03860 PF02049 Flagellar hook-basal body complex protein FliE MSIP34_RS03865 PF01514 Secretory protein of YscJ/FliF family MSIP34_RS03865 PF08345 Flagellar M-ring protein C-terminal MSIP34_RS03870 PF14842 FliG N-terminal domain MSIP34_RS03870 PF01706 FliG C-terminal domain MSIP34_RS03870 PF14841 FliG middle domain MSIP34_RS03880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MSIP34_RS03880 PF18269 T3SS EscN ATPase C-terminal domain MSIP34_RS03900 PF02154 Flagellar motor switch protein FliM MSIP34_RS03900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MSIP34_RS03905 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MSIP34_RS03905 PF16973 Flagellar motor switch protein FliN N-terminal MSIP34_RS03915 PF00813 FliP family MSIP34_RS03920 PF01313 Bacterial export proteins, family 3 MSIP34_RS03925 PF01311 Bacterial export proteins, family 1 MSIP34_RS03930 PF00669 Bacterial flagellin N-terminal helical region MSIP34_RS03935 PF00460 Flagella basal body rod protein MSIP34_RS03935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MSIP34_RS03940 PF10135 Rod binding protein MSIP34_RS03940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MSIP34_RS03945 PF02119 Flagellar P-ring protein MSIP34_RS03950 PF02107 Flagellar L-ring protein MSIP34_RS03955 PF00460 Flagella basal body rod protein MSIP34_RS03955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MSIP34_RS03960 PF00460 Flagella basal body rod protein MSIP34_RS03960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MSIP34_RS03965 PF07559 Flagellar basal body protein FlaE MSIP34_RS03965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MSIP34_RS03965 PF00460 Flagella basal body rod protein MSIP34_RS03970 PF13861 FlgD Tudor-like domain MSIP34_RS03970 PF13860 FlgD Ig-like domain MSIP34_RS03970 PF03963 Flagellar hook capping protein - N-terminal region MSIP34_RS03975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MSIP34_RS03975 PF00460 Flagella basal body rod protein MSIP34_RS03980 PF00460 Flagella basal body rod protein MSIP34_RS03985 PF13144 Chaperone for flagella basal body P-ring formation MSIP34_RS04000 PF02308 MgtC family MSIP34_RS04005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MSIP34_RS04005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MSIP34_RS04010 PF00691 OmpA family MSIP34_RS04010 PF13677 Membrane MotB of proton-channel complex MotA/MotB MSIP34_RS04015 PF01618 MotA/TolQ/ExbB proton channel family MSIP34_RS04020 PF04539 Sigma-70 region 3 MSIP34_RS04020 PF04545 Sigma-70, region 4 MSIP34_RS04020 PF04542 Sigma-70 region 2 MSIP34_RS04030 PF00448 SRP54-type protein, GTPase domain MSIP34_RS04035 PF00771 FHIPEP family MSIP34_RS04040 PF01312 FlhB HrpN YscU SpaS Family MSIP34_RS04045 PF05247 Flagellar transcriptional activator (FlhD) MSIP34_RS04050 PF05280 Flagellar transcriptional activator (FlhC) MSIP34_RS04060 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS04060 PF00593 TonB dependent receptor MSIP34_RS04080 PF03929 PepSY-associated TM region MSIP34_RS04085 PF00593 TonB dependent receptor MSIP34_RS04085 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS04095 PF04542 Sigma-70 region 2 MSIP34_RS04095 PF08281 Sigma-70, region 4 MSIP34_RS04100 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS04100 PF07660 Secretin and TonB N terminus short domain MSIP34_RS04100 PF00593 TonB dependent receptor MSIP34_RS04110 PF16220 Domain of unknown function (DUF4880) MSIP34_RS04110 PF04773 FecR protein MSIP34_RS04120 PF01618 MotA/TolQ/ExbB proton channel family MSIP34_RS04125 PF13677 Membrane MotB of proton-channel complex MotA/MotB MSIP34_RS04125 PF00691 OmpA family MSIP34_RS04135 PF00072 Response regulator receiver domain MSIP34_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS04140 PF01627 Hpt domain MSIP34_RS04140 PF02895 Signal transducing histidine kinase, homodimeric domain MSIP34_RS04140 PF09078 CheY binding MSIP34_RS04140 PF01584 CheW-like domain MSIP34_RS04145 PF01584 CheW-like domain MSIP34_RS04150 PF02203 Tar ligand binding domain homologue MSIP34_RS04150 PF00672 HAMP domain MSIP34_RS04150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS04160 PF00672 HAMP domain MSIP34_RS04160 PF02203 Tar ligand binding domain homologue MSIP34_RS04160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS04165 PF03705 CheR methyltransferase, all-alpha domain MSIP34_RS04165 PF01739 CheR methyltransferase, SAM binding domain MSIP34_RS04170 PF03975 CheD chemotactic sensory transduction MSIP34_RS04175 PF00072 Response regulator receiver domain MSIP34_RS04175 PF01339 CheB methylesterase MSIP34_RS04180 PF00072 Response regulator receiver domain MSIP34_RS04185 PF04344 Chemotaxis phosphatase, CheZ MSIP34_RS04190 PF00403 Heavy-metal-associated domain MSIP34_RS04200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MSIP34_RS04200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MSIP34_RS04200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MSIP34_RS04200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MSIP34_RS04205 PF00005 ABC transporter MSIP34_RS04205 PF00664 ABC transporter transmembrane region MSIP34_RS04210 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS04210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS04215 PF00534 Glycosyl transferases group 1 MSIP34_RS04215 PF13439 Glycosyltransferase Family 4 MSIP34_RS04225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MSIP34_RS04225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MSIP34_RS04225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MSIP34_RS04225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MSIP34_RS04230 PF06969 HemN C-terminal domain MSIP34_RS04230 PF04055 Radical SAM superfamily MSIP34_RS04235 PF04384 Iron-sulphur cluster assembly MSIP34_RS04240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MSIP34_RS04250 PF00464 Serine hydroxymethyltransferase MSIP34_RS04255 PF03477 ATP cone domain MSIP34_RS04260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MSIP34_RS04260 PF01872 RibD C-terminal domain MSIP34_RS04265 PF01026 TatD related DNase MSIP34_RS04280 PF08334 Type II secretion system (T2SS), protein G MSIP34_RS04280 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS04315 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MSIP34_RS04315 PF00437 Type II/IV secretion system protein MSIP34_RS04320 PF00482 Type II secretion system (T2SS), protein F MSIP34_RS04325 PF08334 Type II secretion system (T2SS), protein G MSIP34_RS04325 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS04360 PF01008 Initiation factor 2 subunit family MSIP34_RS04365 PF00596 Class II Aldolase and Adducin N-terminal domain MSIP34_RS04370 PF03853 YjeF-related protein N-terminus MSIP34_RS04370 PF01256 Carbohydrate kinase MSIP34_RS04375 PF00117 Glutamine amidotransferase class-I MSIP34_RS04375 PF06418 CTP synthase N-terminus MSIP34_RS04380 PF00793 DAHP synthetase I family MSIP34_RS04385 PF03952 Enolase, N-terminal domain MSIP34_RS04385 PF00113 Enolase, C-terminal TIM barrel domain MSIP34_RS04390 PF04977 Septum formation initiator MSIP34_RS04395 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS04405 PF01571 Aminomethyltransferase folate-binding domain MSIP34_RS04440 PF17863 AAA lid domain MSIP34_RS04440 PF07726 ATPase family associated with various cellular activities (AAA) MSIP34_RS04445 PF07977 FabA-like domain MSIP34_RS04450 PF02801 Beta-ketoacyl synthase, C-terminal domain MSIP34_RS04450 PF00109 Beta-ketoacyl synthase, N-terminal domain MSIP34_RS04455 PF04430 Protein of unknown function (DUF498/DUF598) MSIP34_RS04460 PF00155 Aminotransferase class I and II MSIP34_RS04465 PF00742 Homoserine dehydrogenase MSIP34_RS04465 PF01842 ACT domain MSIP34_RS04465 PF03447 Homoserine dehydrogenase, NAD binding domain MSIP34_RS04470 PF14821 Threonine synthase N terminus MSIP34_RS04470 PF00291 Pyridoxal-phosphate dependent enzyme MSIP34_RS04475 PF00303 Thymidylate synthase MSIP34_RS04500 PF00158 Sigma-54 interaction domain MSIP34_RS04500 PF00072 Response regulator receiver domain MSIP34_RS04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS04510 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS04515 PF00186 Dihydrofolate reductase MSIP34_RS04525 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain MSIP34_RS04525 PF01276 Orn/Lys/Arg decarboxylase, major domain MSIP34_RS04525 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MSIP34_RS04530 PF07683 Cobalamin synthesis protein cobW C-terminal domain MSIP34_RS04530 PF02492 CobW/HypB/UreG, nucleotide-binding domain MSIP34_RS04535 PF07683 Cobalamin synthesis protein cobW C-terminal domain MSIP34_RS04535 PF02492 CobW/HypB/UreG, nucleotide-binding domain MSIP34_RS04540 PF01258 Prokaryotic dksA/traR C4-type zinc finger MSIP34_RS04550 PF00773 RNB domain MSIP34_RS04560 PF02926 THUMP domain MSIP34_RS04560 PF01170 Putative RNA methylase family UPF0020 MSIP34_RS04575 PF02769 AIR synthase related protein, C-terminal domain MSIP34_RS04575 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MSIP34_RS04575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MSIP34_RS04590 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding MSIP34_RS04590 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS04590 PF10518 TAT (twin-arginine translocation) pathway signal sequence MSIP34_RS04595 PF07995 Glucose / Sorbosone dehydrogenase MSIP34_RS04615 PF00549 CoA-ligase MSIP34_RS04615 PF08442 ATP-grasp domain MSIP34_RS04620 PF00549 CoA-ligase MSIP34_RS04620 PF02629 CoA binding domain MSIP34_RS04630 PF02540 NAD synthase MSIP34_RS04630 PF00795 Carbon-nitrogen hydrolase MSIP34_RS04635 PF00543 Nitrogen regulatory protein P-II MSIP34_RS04645 PF07664 Ferrous iron transport protein B C terminus MSIP34_RS04645 PF07670 Nucleoside recognition MSIP34_RS04645 PF02421 Ferrous iron transport protein B MSIP34_RS04665 PF01722 BolA-like protein MSIP34_RS04670 PF03795 YCII-related domain MSIP34_RS04675 PF04279 Intracellular septation protein A MSIP34_RS04680 PF02811 PHP domain MSIP34_RS04685 PF01300 Telomere recombination MSIP34_RS04690 PF02163 Peptidase family M50 MSIP34_RS04695 PF00579 tRNA synthetases class I (W and Y) MSIP34_RS04700 PF00893 Small Multidrug Resistance protein MSIP34_RS04705 PF02616 Segregation and condensation protein ScpA MSIP34_RS04710 PF04079 Segregation and condensation complex subunit ScpB MSIP34_RS04715 PF00849 RNA pseudouridylate synthase MSIP34_RS04715 PF01479 S4 domain MSIP34_RS04720 PF00563 EAL domain MSIP34_RS04720 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS04720 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS04735 PF05175 Methyltransferase small domain MSIP34_RS04740 PF07687 Peptidase dimerisation domain MSIP34_RS04740 PF01546 Peptidase family M20/M25/M40 MSIP34_RS04745 PF03960 ArsC family MSIP34_RS04750 PF14602 Hexapeptide repeat of succinyl-transferase MSIP34_RS04750 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal MSIP34_RS04750 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS04755 PF01435 Peptidase family M48 MSIP34_RS04760 PF02705 K+ potassium transporter MSIP34_RS04770 PF13742 OB-fold nucleic acid binding domain MSIP34_RS04770 PF02601 Exonuclease VII, large subunit MSIP34_RS04775 PF02600 Disulfide bond formation protein DsbB MSIP34_RS04780 PF00291 Pyridoxal-phosphate dependent enzyme MSIP34_RS04810 PF00497 Bacterial extracellular solute-binding proteins, family 3 MSIP34_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS04820 PF00005 ABC transporter MSIP34_RS04825 PF02633 Creatinine amidohydrolase MSIP34_RS04830 PF00120 Glutamine synthetase, catalytic domain MSIP34_RS04835 PF08753 NikR C terminal nickel binding domain MSIP34_RS04835 PF01402 Ribbon-helix-helix protein, copG family MSIP34_RS04845 PF09347 Domain of unknown function (DUF1989) MSIP34_RS04850 PF00289 Biotin carboxylase, N-terminal domain MSIP34_RS04850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MSIP34_RS04850 PF02785 Biotin carboxylase C-terminal domain MSIP34_RS04855 PF01425 Amidase MSIP34_RS04860 PF01425 Amidase MSIP34_RS04870 PF13520 Amino acid permease MSIP34_RS04875 PF06751 Ethanolamine ammonia lyase large subunit (EutB) MSIP34_RS04880 PF05985 Ethanolamine ammonia-lyase light chain (EutC) MSIP34_RS04885 PF01556 DnaJ C terminal domain MSIP34_RS04885 PF00226 DnaJ domain MSIP34_RS04885 PF00684 DnaJ central domain MSIP34_RS04890 PF00793 DAHP synthetase I family MSIP34_RS04900 PF01938 TRAM domain MSIP34_RS04900 PF05958 tRNA (Uracil-5-)-methyltransferase MSIP34_RS04910 PF00857 Isochorismatase family MSIP34_RS04915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MSIP34_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS04930 PF12911 N-terminal TM domain of oligopeptide transport permease C MSIP34_RS04930 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS04940 PF00933 Glycosyl hydrolase family 3 N terminal domain MSIP34_RS04945 PF01027 Inhibitor of apoptosis-promoting Bax1 MSIP34_RS04950 PF14437 MafB19-like deaminase MSIP34_RS04955 PF01841 Transglutaminase-like superfamily MSIP34_RS04955 PF13559 Domain of unknown function (DUF4129) MSIP34_RS04955 PF11992 Domain of unknown function (DUF3488) MSIP34_RS04965 PF07726 ATPase family associated with various cellular activities (AAA) MSIP34_RS04965 PF17863 AAA lid domain MSIP34_RS04975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS04975 PF03466 LysR substrate binding domain MSIP34_RS04980 PF17954 Quercetinase C-terminal cupin domain MSIP34_RS04980 PF02678 Pirin MSIP34_RS04985 PF03358 NADPH-dependent FMN reductase MSIP34_RS04990 PF04264 YceI-like domain MSIP34_RS04995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MSIP34_RS05005 PF00085 Thioredoxin MSIP34_RS05015 PF01476 LysM domain MSIP34_RS05015 PF01551 Peptidase family M23 MSIP34_RS05025 PF01975 Survival protein SurE MSIP34_RS05040 PF03358 NADPH-dependent FMN reductase MSIP34_RS05050 PF08328 Adenylosuccinate lyase C-terminal MSIP34_RS05050 PF00206 Lyase MSIP34_RS05060 PF08448 PAS fold MSIP34_RS05060 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05060 PF00563 EAL domain MSIP34_RS05070 PF11791 Aconitate B N-terminal domain MSIP34_RS05070 PF06434 Aconitate hydratase 2 N-terminus MSIP34_RS05070 PF00330 Aconitase family (aconitate hydratase) MSIP34_RS05085 PF03350 Uncharacterized protein family, UPF0114 MSIP34_RS05090 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MSIP34_RS05095 PF00080 Copper/zinc superoxide dismutase (SODC) MSIP34_RS05105 PF01545 Cation efflux family MSIP34_RS05115 PF02151 UvrB/uvrC motif MSIP34_RS05115 PF01541 GIY-YIG catalytic domain MSIP34_RS05115 PF08459 UvrC Helix-hairpin-helix N-terminal MSIP34_RS05120 PF01066 CDP-alcohol phosphatidyltransferase MSIP34_RS05140 PF07769 psiF repeat MSIP34_RS05145 PF00005 ABC transporter MSIP34_RS05145 PF00664 ABC transporter transmembrane region MSIP34_RS05145 PF03412 Peptidase C39 family MSIP34_RS05150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS05150 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS05155 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS05170 PF00563 EAL domain MSIP34_RS05170 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05170 PF13188 PAS domain MSIP34_RS05170 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS05180 PF02321 Outer membrane efflux protein MSIP34_RS05200 PF00875 DNA photolyase MSIP34_RS05200 PF03441 FAD binding domain of DNA photolyase MSIP34_RS05205 PF04244 Deoxyribodipyrimidine photo-lyase-related protein MSIP34_RS05210 PF01541 GIY-YIG catalytic domain MSIP34_RS05225 PF00245 Alkaline phosphatase MSIP34_RS05235 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS05235 PF08334 Type II secretion system (T2SS), protein G MSIP34_RS05240 PF00482 Type II secretion system (T2SS), protein F MSIP34_RS05245 PF00437 Type II/IV secretion system protein MSIP34_RS05270 PF11741 AMIN domain MSIP34_RS05270 PF00263 Bacterial type II and III secretion system protein MSIP34_RS05270 PF03958 Bacterial type II/III secretion system short domain MSIP34_RS05270 PF07660 Secretin and TonB N terminus short domain MSIP34_RS05275 PF08334 Type II secretion system (T2SS), protein G MSIP34_RS05275 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS05280 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS05280 PF08334 Type II secretion system (T2SS), protein G MSIP34_RS05290 PF01464 Transglycosylase SLT domain MSIP34_RS05305 PF00578 AhpC/TSA family MSIP34_RS05355 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS05355 PF00593 TonB dependent receptor MSIP34_RS05360 PF13640 2OG-Fe(II) oxygenase superfamily MSIP34_RS05360 PF18331 PKHD-type hydroxylase C-terminal domain MSIP34_RS05380 PF00593 TonB dependent receptor MSIP34_RS05380 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS05385 PF16326 ABC transporter C-terminal domain MSIP34_RS05385 PF00005 ABC transporter MSIP34_RS05385 PF12848 ABC transporter MSIP34_RS05395 PF00072 Response regulator receiver domain MSIP34_RS05395 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS05400 PF13492 GAF domain MSIP34_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS05400 PF02702 Osmosensitive K+ channel His kinase sensor domain MSIP34_RS05400 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS05400 PF13493 Domain of unknown function (DUF4118) MSIP34_RS05405 PF02669 K+-transporting ATPase, c chain MSIP34_RS05415 PF03814 Potassium-transporting ATPase A subunit MSIP34_RS05425 PF07690 Major Facilitator Superfamily MSIP34_RS05430 PF13361 UvrD-like helicase C-terminal domain MSIP34_RS05430 PF00580 UvrD/REP helicase N-terminal domain MSIP34_RS05435 PF05230 MASE2 domain MSIP34_RS05435 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05445 PF00563 EAL domain MSIP34_RS05445 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS05445 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05450 PF01926 50S ribosome-binding GTPase MSIP34_RS05480 PF03631 Virulence factor BrkB MSIP34_RS05495 PF00905 Penicillin binding protein transpeptidase domain MSIP34_RS05495 PF00912 Transglycosylase MSIP34_RS05500 PF00270 DEAD/DEAH box helicase MSIP34_RS05500 PF11898 Domain of unknown function (DUF3418) MSIP34_RS05500 PF04408 Helicase associated domain (HA2) MSIP34_RS05500 PF00271 Helicase conserved C-terminal domain MSIP34_RS05500 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MSIP34_RS05505 PF01047 MarR family MSIP34_RS05510 PF02321 Outer membrane efflux protein MSIP34_RS05515 PF04632 Fusaric acid resistance protein family MSIP34_RS05525 PF13533 Biotin-lipoyl like MSIP34_RS05535 PF03466 LysR substrate binding domain MSIP34_RS05535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS05540 PF08267 Cobalamin-independent synthase, N-terminal domain MSIP34_RS05540 PF01717 Cobalamin-independent synthase, Catalytic domain MSIP34_RS05550 PF00317 Ribonucleotide reductase, all-alpha domain MSIP34_RS05550 PF02867 Ribonucleotide reductase, barrel domain MSIP34_RS05550 PF03477 ATP cone domain MSIP34_RS05555 PF00268 Ribonucleotide reductase, small chain MSIP34_RS05560 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) MSIP34_RS05560 PF00271 Helicase conserved C-terminal domain MSIP34_RS05560 PF08463 EcoEI R protein C-terminal MSIP34_RS05560 PF04851 Type III restriction enzyme, res subunit MSIP34_RS05565 PF02384 N-6 DNA Methylase MSIP34_RS05565 PF12161 HsdM N-terminal domain MSIP34_RS05570 PF01420 Type I restriction modification DNA specificity domain MSIP34_RS05575 PF00692 dUTPase MSIP34_RS05580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MSIP34_RS05580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MSIP34_RS05585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MSIP34_RS05585 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MSIP34_RS05590 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MSIP34_RS05600 PF10609 NUBPL iron-transfer P-loop NTPase MSIP34_RS05605 PF01588 Putative tRNA binding domain MSIP34_RS05605 PF09334 tRNA synthetases class I (M) MSIP34_RS05615 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MSIP34_RS05620 PF18073 Rubredoxin metal binding domain MSIP34_RS05630 PF00216 Bacterial DNA-binding protein MSIP34_RS05635 PF00575 S1 RNA binding domain MSIP34_RS05640 PF02224 Cytidylate kinase MSIP34_RS05650 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MSIP34_RS05655 PF02153 Prephenate dehydrogenase MSIP34_RS05655 PF01842 ACT domain MSIP34_RS05660 PF04376 Arginine-tRNA-protein transferase, N terminus MSIP34_RS05660 PF04377 Arginine-tRNA-protein transferase, C terminus MSIP34_RS05665 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MSIP34_RS05670 PF00563 EAL domain MSIP34_RS05670 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS05670 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05675 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05675 PF08448 PAS fold MSIP34_RS05685 PF00440 Bacterial regulatory proteins, tetR family MSIP34_RS05690 PF00561 alpha/beta hydrolase fold MSIP34_RS05700 PF04055 Radical SAM superfamily MSIP34_RS05700 PF08497 Radical SAM N-terminal MSIP34_RS05700 PF11842 Domain of unknown function (DUF3362) MSIP34_RS05715 PF00893 Small Multidrug Resistance protein MSIP34_RS05720 PF01339 CheB methylesterase MSIP34_RS05720 PF00072 Response regulator receiver domain MSIP34_RS05725 PF00072 Response regulator receiver domain MSIP34_RS05725 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS05745 PF07730 Histidine kinase MSIP34_RS05780 PF08212 Lipocalin-like domain MSIP34_RS05785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MSIP34_RS05790 PF00270 DEAD/DEAH box helicase MSIP34_RS05790 PF00271 Helicase conserved C-terminal domain MSIP34_RS05795 PF01479 S4 domain MSIP34_RS05795 PF00849 RNA pseudouridylate synthase MSIP34_RS05805 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MSIP34_RS05810 PF02733 Dak1 domain MSIP34_RS05815 PF02734 DAK2 domain MSIP34_RS05820 PF00588 SpoU rRNA Methylase family MSIP34_RS05820 PF08032 RNA 2'-O ribose methyltransferase substrate binding MSIP34_RS05830 PF01430 Hsp33 protein MSIP34_RS05835 PF00749 tRNA synthetases class I (E and Q), catalytic domain MSIP34_RS05850 PF03976 Polyphosphate kinase 2 (PPK2) MSIP34_RS05855 PF02805 Metal binding domain of Ada MSIP34_RS05855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MSIP34_RS05855 PF12833 Helix-turn-helix domain MSIP34_RS05855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MSIP34_RS05860 PF01022 Bacterial regulatory protein, arsR family MSIP34_RS05870 PF01451 Low molecular weight phosphotyrosine protein phosphatase MSIP34_RS05875 PF01758 Sodium Bile acid symporter family MSIP34_RS05880 PF00909 Ammonium Transporter Family MSIP34_RS05890 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS05890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS05895 PF00873 AcrB/AcrD/AcrF family MSIP34_RS05900 PF02321 Outer membrane efflux protein MSIP34_RS05910 PF13811 Domain of unknown function (DUF4186) MSIP34_RS05915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS05915 PF00672 HAMP domain MSIP34_RS05915 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS05920 PF00072 Response regulator receiver domain MSIP34_RS05920 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS05930 PF11798 IMS family HHH motif MSIP34_RS05930 PF00817 impB/mucB/samB family MSIP34_RS05930 PF13438 Domain of unknown function (DUF4113) MSIP34_RS05930 PF11799 impB/mucB/samB family C-terminal domain MSIP34_RS05940 PF03352 Methyladenine glycosylase MSIP34_RS05945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS05945 PF00672 HAMP domain MSIP34_RS05945 PF02203 Tar ligand binding domain homologue MSIP34_RS05965 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS05965 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05965 PF00563 EAL domain MSIP34_RS05970 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MSIP34_RS05980 PF00563 EAL domain MSIP34_RS05980 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS05980 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS05990 PF00171 Aldehyde dehydrogenase family MSIP34_RS06000 PF00037 4Fe-4S binding domain MSIP34_RS06000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MSIP34_RS06000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MSIP34_RS06005 PF01568 Molydopterin dinucleotide binding domain MSIP34_RS06005 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MSIP34_RS06005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MSIP34_RS06005 PF00384 Molybdopterin oxidoreductase MSIP34_RS06005 PF00037 4Fe-4S binding domain MSIP34_RS06010 PF02634 FdhD/NarQ family MSIP34_RS06020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MSIP34_RS06025 PF02542 YgbB family MSIP34_RS06030 PF00873 AcrB/AcrD/AcrF family MSIP34_RS06035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS06045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MSIP34_RS06050 PF01713 Smr domain MSIP34_RS06055 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS06060 PF00210 Ferritin-like domain MSIP34_RS06065 PF09397 Ftsk gamma domain MSIP34_RS06065 PF17854 FtsK alpha domain MSIP34_RS06065 PF01580 FtsK/SpoIIIE family MSIP34_RS06065 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MSIP34_RS06070 PF03548 Outer membrane lipoprotein carrier protein LolA MSIP34_RS06075 PF16193 AAA C-terminal domain MSIP34_RS06075 PF12002 MgsA AAA+ ATPase C terminal MSIP34_RS06075 PF00004 ATPase family associated with various cellular activities (AAA) MSIP34_RS06080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MSIP34_RS06080 PF02403 Seryl-tRNA synthetase N-terminal domain MSIP34_RS06085 PF00999 Sodium/hydrogen exchanger family MSIP34_RS06085 PF02254 TrkA-N domain MSIP34_RS06090 PF01464 Transglycosylase SLT domain MSIP34_RS06090 PF00497 Bacterial extracellular solute-binding proteins, family 3 MSIP34_RS06115 PF02801 Beta-ketoacyl synthase, C-terminal domain MSIP34_RS06115 PF00109 Beta-ketoacyl synthase, N-terminal domain MSIP34_RS06120 PF00550 Phosphopantetheine attachment site MSIP34_RS06130 PF00202 Aminotransferase class-III MSIP34_RS06145 PF02630 SCO1/SenC MSIP34_RS06150 PF01040 UbiA prenyltransferase family MSIP34_RS06155 PF02628 Cytochrome oxidase assembly protein MSIP34_RS06175 PF00510 Cytochrome c oxidase subunit III MSIP34_RS06180 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 MSIP34_RS06185 PF00115 Cytochrome C and Quinol oxidase polypeptide I MSIP34_RS06190 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MSIP34_RS06190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MSIP34_RS06205 PF00005 ABC transporter MSIP34_RS06205 PF12704 MacB-like periplasmic core domain MSIP34_RS06205 PF02687 FtsX-like permease family MSIP34_RS06210 PF00005 ABC transporter MSIP34_RS06215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS06225 PF12848 ABC transporter MSIP34_RS06225 PF00005 ABC transporter MSIP34_RS06230 PF00881 Nitroreductase family MSIP34_RS06235 PF03449 Transcription elongation factor, N-terminal MSIP34_RS06235 PF01272 Transcription elongation factor, GreA/GreB, C-term MSIP34_RS06240 PF00117 Glutamine amidotransferase class-I MSIP34_RS06240 PF02540 NAD synthase MSIP34_RS06240 PF00958 GMP synthase C terminal domain MSIP34_RS06245 PF00571 CBS domain MSIP34_RS06245 PF00478 IMP dehydrogenase / GMP reductase domain MSIP34_RS06255 PF03658 RnfH family Ubiquitin MSIP34_RS06260 PF03364 Polyketide cyclase / dehydrase and lipid transport MSIP34_RS06265 PF01668 SmpB protein MSIP34_RS06275 PF01584 CheW-like domain MSIP34_RS06290 PF09285 Elongation factor P, C-terminal MSIP34_RS06290 PF01132 Elongation factor P (EF-P) OB domain MSIP34_RS06290 PF08207 Elongation factor P (EF-P) KOW-like domain MSIP34_RS06300 PF03449 Transcription elongation factor, N-terminal MSIP34_RS06300 PF01272 Transcription elongation factor, GreA/GreB, C-term MSIP34_RS06310 PF12705 PD-(D/E)XK nuclease superfamily MSIP34_RS06310 PF13361 UvrD-like helicase C-terminal domain MSIP34_RS06310 PF00580 UvrD/REP helicase N-terminal domain MSIP34_RS06315 PF09335 SNARE associated Golgi protein MSIP34_RS06330 PF02559 CarD-like/TRCF domain MSIP34_RS06330 PF17757 UvrB interaction domain MSIP34_RS06330 PF03461 TRCF domain MSIP34_RS06330 PF00271 Helicase conserved C-terminal domain MSIP34_RS06330 PF00270 DEAD/DEAH box helicase MSIP34_RS06345 PF01523 Putative modulator of DNA gyrase MSIP34_RS06350 PF00795 Carbon-nitrogen hydrolase MSIP34_RS06360 PF00005 ABC transporter MSIP34_RS06360 PF12848 ABC transporter MSIP34_RS06380 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS06380 PF00072 Response regulator receiver domain MSIP34_RS06385 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS06385 PF16527 Two-component sensor protein CpxA, periplasmic domain MSIP34_RS06385 PF00672 HAMP domain MSIP34_RS06390 PF00027 Cyclic nucleotide-binding domain MSIP34_RS06390 PF13302 Acetyltransferase (GNAT) domain MSIP34_RS06405 PF00884 Sulfatase MSIP34_RS06405 PF08019 Phosphoethanolamine transferase EptA/EptB MSIP34_RS06430 PF00155 Aminotransferase class I and II MSIP34_RS06435 PF17820 PDZ domain MSIP34_RS06435 PF13180 PDZ domain MSIP34_RS06440 PF02151 UvrB/uvrC motif MSIP34_RS06440 PF04851 Type III restriction enzyme, res subunit MSIP34_RS06440 PF00271 Helicase conserved C-terminal domain MSIP34_RS06440 PF17757 UvrB interaction domain MSIP34_RS06440 PF12344 Ultra-violet resistance protein B MSIP34_RS06445 PF10150 Ribonuclease E/G family MSIP34_RS06445 PF12111 Polyribonucleotide phosphorylase C terminal MSIP34_RS06445 PF00575 S1 RNA binding domain MSIP34_RS06450 PF00849 RNA pseudouridylate synthase MSIP34_RS06450 PF01479 S4 domain MSIP34_RS06465 PF01343 Peptidase family S49 MSIP34_RS06465 PF06965 Na+/H+ antiporter 1 MSIP34_RS06470 PF00342 Phosphoglucose isomerase MSIP34_RS06475 PF00128 Alpha amylase, catalytic domain MSIP34_RS06475 PF02806 Alpha amylase, C-terminal all-beta domain MSIP34_RS06475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MSIP34_RS06480 PF00483 Nucleotidyl transferase MSIP34_RS06490 PF09094 Domain of unknown function (DUF1925) MSIP34_RS06490 PF09095 Domain of unknown function (DUF1926) MSIP34_RS06490 PF03065 Glycosyl hydrolase family 57 MSIP34_RS06495 PF00480 ROK family MSIP34_RS06500 PF13188 PAS domain MSIP34_RS06500 PF00563 EAL domain MSIP34_RS06500 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS06500 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS06530 PF00535 Glycosyl transferase family 2 MSIP34_RS06540 PF08331 Domain of unknown function (DUF1730) MSIP34_RS06545 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MSIP34_RS06550 PF01520 N-acetylmuramoyl-L-alanine amidase MSIP34_RS06550 PF11741 AMIN domain MSIP34_RS06555 PF00753 Metallo-beta-lactamase superfamily MSIP34_RS06555 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MSIP34_RS06555 PF10996 Beta-Casp domain MSIP34_RS06565 PF08676 MutL C terminal dimerisation domain MSIP34_RS06565 PF01119 DNA mismatch repair protein, C-terminal domain MSIP34_RS06570 PF08543 Phosphomethylpyrimidine kinase MSIP34_RS06570 PF02581 Thiamine monophosphate synthase MSIP34_RS06580 PF00155 Aminotransferase class I and II MSIP34_RS06585 PF00892 EamA-like transporter family MSIP34_RS06595 PF00437 Type II/IV secretion system protein MSIP34_RS06600 PF00672 HAMP domain MSIP34_RS06600 PF00563 EAL domain MSIP34_RS06600 PF17154 Gammaproteobacterial periplasmic sensor domain MSIP34_RS06600 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS06610 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06610 PF01266 FAD dependent oxidoreductase MSIP34_RS06615 PF03848 Tellurite resistance protein TehB MSIP34_RS06630 PF01593 Flavin containing amine oxidoreductase MSIP34_RS06665 PF13411 MerR HTH family regulatory protein MSIP34_RS06665 PF02310 B12 binding domain MSIP34_RS06665 PF02607 B12 binding domain MSIP34_RS06675 PF04542 Sigma-70 region 2 MSIP34_RS06675 PF08281 Sigma-70, region 4 MSIP34_RS06680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MSIP34_RS06680 PF13360 PQQ-like domain MSIP34_RS06710 PF14489 QueF-like protein MSIP34_RS06715 PF06470 SMC proteins Flexible Hinge Domain MSIP34_RS06715 PF02463 RecF/RecN/SMC N terminal domain MSIP34_RS06725 PF00533 BRCA1 C Terminus (BRCT) domain MSIP34_RS06725 PF12826 Helix-hairpin-helix motif MSIP34_RS06725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MSIP34_RS06725 PF01653 NAD-dependent DNA ligase adenylation domain MSIP34_RS06725 PF03120 NAD-dependent DNA ligase OB-fold domain MSIP34_RS06730 PF00459 Inositol monophosphatase family MSIP34_RS06740 PF00174 Oxidoreductase molybdopterin binding domain MSIP34_RS06745 PF01794 Ferric reductase like transmembrane component MSIP34_RS06760 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MSIP34_RS06775 PF13091 PLD-like domain MSIP34_RS06795 PF00107 Zinc-binding dehydrogenase MSIP34_RS06795 PF13823 Alcohol dehydrogenase GroES-associated MSIP34_RS06795 PF08240 Alcohol dehydrogenase GroES-like domain MSIP34_RS06800 PF00701 Dihydrodipicolinate synthetase family MSIP34_RS06840 PF00106 short chain dehydrogenase MSIP34_RS06865 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS06865 PF00072 Response regulator receiver domain MSIP34_RS06890 PF00403 Heavy-metal-associated domain MSIP34_RS06895 PF00313 'Cold-shock' DNA-binding domain MSIP34_RS06945 PF04717 Type VI secretion system, phage-baseplate injector MSIP34_RS06955 PF00175 Oxidoreductase NAD-binding domain MSIP34_RS06955 PF00970 Oxidoreductase FAD-binding domain MSIP34_RS06965 PF02322 Cytochrome bd terminal oxidase subunit II MSIP34_RS06970 PF01654 Cytochrome bd terminal oxidase subunit I MSIP34_RS06975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MSIP34_RS06980 PF01799 [2Fe-2S] binding domain MSIP34_RS06980 PF00111 2Fe-2S iron-sulfur cluster binding domain MSIP34_RS06985 PF12804 MobA-like NTP transferase domain MSIP34_RS06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS06995 PF03466 LysR substrate binding domain MSIP34_RS07005 PF03099 Biotin/lipoate A/B protein ligase family MSIP34_RS07005 PF12706 Beta-lactamase superfamily domain MSIP34_RS07010 PF01026 TatD related DNase MSIP34_RS07020 PF09115 DNA polymerase III, delta subunit, C terminal MSIP34_RS07025 PF02223 Thymidylate kinase MSIP34_RS07030 PF02618 YceG-like family MSIP34_RS07035 PF01063 Amino-transferase class IV MSIP34_RS07040 PF02801 Beta-ketoacyl synthase, C-terminal domain MSIP34_RS07040 PF00109 Beta-ketoacyl synthase, N-terminal domain MSIP34_RS07045 PF00550 Phosphopantetheine attachment site MSIP34_RS07055 PF00698 Acyl transferase domain MSIP34_RS07060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MSIP34_RS07060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MSIP34_RS07065 PF02504 Fatty acid synthesis protein MSIP34_RS07070 PF02620 Large ribosomal RNA subunit accumulation protein YceD MSIP34_RS07075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MSIP34_RS07075 PF02785 Biotin carboxylase C-terminal domain MSIP34_RS07075 PF00289 Biotin carboxylase, N-terminal domain MSIP34_RS07080 PF00364 Biotin-requiring enzyme MSIP34_RS07080 PF00682 HMGL-like MSIP34_RS07080 PF02436 Conserved carboxylase domain MSIP34_RS07085 PF02545 Maf-like protein MSIP34_RS07095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MSIP34_RS07100 PF01351 Ribonuclease HII MSIP34_RS07105 PF02684 Lipid-A-disaccharide synthetase MSIP34_RS07110 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MSIP34_RS07110 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS07115 PF07977 FabA-like domain MSIP34_RS07120 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MSIP34_RS07120 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS07130 PF07244 Surface antigen variable number repeat MSIP34_RS07130 PF01103 Surface antigen MSIP34_RS07135 PF13180 PDZ domain MSIP34_RS07135 PF02163 Peptidase family M50 MSIP34_RS07135 PF17820 PDZ domain MSIP34_RS07140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MSIP34_RS07140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MSIP34_RS07140 PF13288 DXP reductoisomerase C-terminal domain MSIP34_RS07150 PF01255 Putative undecaprenyl diphosphate synthase MSIP34_RS07155 PF01765 Ribosome recycling factor MSIP34_RS07160 PF00696 Amino acid kinase family MSIP34_RS07165 PF00889 Elongation factor TS MSIP34_RS07170 PF00318 Ribosomal protein S2 MSIP34_RS07175 PF00557 Metallopeptidase family M24 MSIP34_RS07180 PF01966 HD domain MSIP34_RS07180 PF01909 Nucleotidyltransferase domain MSIP34_RS07180 PF08335 GlnD PII-uridylyltransferase MSIP34_RS07185 PF11799 impB/mucB/samB family C-terminal domain MSIP34_RS07185 PF00817 impB/mucB/samB family MSIP34_RS07190 PF00106 short chain dehydrogenase MSIP34_RS07205 PF01327 Polypeptide deformylase MSIP34_RS07210 PF01048 Phosphorylase superfamily MSIP34_RS07230 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV MSIP34_RS07235 PF00106 short chain dehydrogenase MSIP34_RS07245 PF09997 Predicted membrane protein (DUF2238) MSIP34_RS07250 PF13419 Haloacid dehalogenase-like hydrolase MSIP34_RS07255 PF18073 Rubredoxin metal binding domain MSIP34_RS07260 PF00842 Alanine racemase, C-terminal domain MSIP34_RS07260 PF01168 Alanine racemase, N-terminal domain MSIP34_RS07265 PF00772 DnaB-like helicase N terminal domain MSIP34_RS07265 PF03796 DnaB-like helicase C terminal domain MSIP34_RS07270 PF01053 Cys/Met metabolism PLP-dependent enzyme MSIP34_RS07275 PF01281 Ribosomal protein L9, N-terminal domain MSIP34_RS07275 PF03948 Ribosomal protein L9, C-terminal domain MSIP34_RS07280 PF01084 Ribosomal protein S18 MSIP34_RS07290 PF01250 Ribosomal protein S6 MSIP34_RS07295 PF00311 Phosphoenolpyruvate carboxylase MSIP34_RS07305 PF08323 Starch synthase catalytic domain MSIP34_RS07305 PF00534 Glycosyl transferases group 1 MSIP34_RS07310 PF00929 Exonuclease MSIP34_RS07315 PF16491 CAAX prenyl protease N-terminal, five membrane helices MSIP34_RS07315 PF01435 Peptidase family M48 MSIP34_RS07325 PF03193 RsgA GTPase MSIP34_RS07330 PF00850 Histone deacetylase domain MSIP34_RS07340 PF04321 RmlD substrate binding domain MSIP34_RS07345 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MSIP34_RS07350 PF00483 Nucleotidyl transferase MSIP34_RS07355 PF16363 GDP-mannose 4,6 dehydratase MSIP34_RS07360 PF00929 Exonuclease MSIP34_RS07365 PF00075 RNase H MSIP34_RS07370 PF08241 Methyltransferase domain MSIP34_RS07375 PF16123 Hydroxyacylglutathione hydrolase C-terminus MSIP34_RS07375 PF00753 Metallo-beta-lactamase superfamily MSIP34_RS07380 PF01476 LysM domain MSIP34_RS07380 PF01464 Transglycosylase SLT domain MSIP34_RS07385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MSIP34_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS07395 PF12911 N-terminal TM domain of oligopeptide transport permease C MSIP34_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS07420 PF00216 Bacterial DNA-binding protein MSIP34_RS07425 PF05362 Lon protease (S16) C-terminal proteolytic domain MSIP34_RS07425 PF02190 ATP-dependent protease La (LON) substrate-binding domain MSIP34_RS07425 PF00004 ATPase family associated with various cellular activities (AAA) MSIP34_RS07430 PF07724 AAA domain (Cdc48 subfamily) MSIP34_RS07430 PF10431 C-terminal, D2-small domain, of ClpB protein MSIP34_RS07430 PF06689 ClpX C4-type zinc finger MSIP34_RS07435 PF00574 Clp protease MSIP34_RS07440 PF05698 Bacterial trigger factor protein (TF) C-terminus MSIP34_RS07440 PF05697 Bacterial trigger factor protein (TF) MSIP34_RS07450 PF02899 Phage integrase, N-terminal SAM-like domain MSIP34_RS07450 PF00589 Phage integrase family MSIP34_RS07465 PF13276 HTH-like domain MSIP34_RS07465 PF13333 Integrase core domain MSIP34_RS07465 PF00665 Integrase core domain MSIP34_RS07470 PF01527 Transposase MSIP34_RS07520 PF00239 Resolvase, N terminal domain MSIP34_RS07520 PF02796 Helix-turn-helix domain of resolvase MSIP34_RS07550 PF11798 IMS family HHH motif MSIP34_RS07550 PF13438 Domain of unknown function (DUF4113) MSIP34_RS07550 PF00817 impB/mucB/samB family MSIP34_RS07550 PF11799 impB/mucB/samB family C-terminal domain MSIP34_RS07555 PF00717 Peptidase S24-like MSIP34_RS07555 PF01726 LexA DNA binding domain MSIP34_RS07565 PF02321 Outer membrane efflux protein MSIP34_RS07575 PF00873 AcrB/AcrD/AcrF family MSIP34_RS07580 PF00563 EAL domain MSIP34_RS07580 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS07580 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS07585 PF01329 Pterin 4 alpha carbinolamine dehydratase MSIP34_RS07595 PF00425 chorismate binding enzyme MSIP34_RS07595 PF04715 Anthranilate synthase component I, N terminal region MSIP34_RS07610 PF00977 Histidine biosynthesis protein MSIP34_RS07615 PF08714 Formaldehyde-activating enzyme (Fae) MSIP34_RS07620 PF08714 Formaldehyde-activating enzyme (Fae) MSIP34_RS07625 PF01380 SIS domain MSIP34_RS07630 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MSIP34_RS07635 PF00923 Transaldolase/Fructose-6-phosphate aldolase MSIP34_RS07645 PF01820 D-ala D-ala ligase N-terminus MSIP34_RS07645 PF07478 D-ala D-ala ligase C-terminus MSIP34_RS07650 PF02289 Cyclohydrolase (MCH) MSIP34_RS07660 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal MSIP34_RS07675 PF07969 Amidohydrolase family MSIP34_RS07680 PF02741 FTR, proximal lobe MSIP34_RS07680 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase MSIP34_RS07690 PF00691 OmpA family MSIP34_RS07695 PF09186 Domain of unknown function (DUF1949) MSIP34_RS07695 PF01205 Uncharacterized protein family UPF0029 MSIP34_RS07705 PF05872 Bacterial protein of unknown function (DUF853) MSIP34_RS07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS07715 PF03466 LysR substrate binding domain MSIP34_RS07720 PF01925 Sulfite exporter TauE/SafE MSIP34_RS07725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MSIP34_RS07725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MSIP34_RS07735 PF01507 Phosphoadenosine phosphosulfate reductase family MSIP34_RS07740 PF01507 Phosphoadenosine phosphosulfate reductase family MSIP34_RS07745 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS07750 PF00037 4Fe-4S binding domain MSIP34_RS07750 PF11953 Domain of unknown function (DUF3470) MSIP34_RS07755 PF16124 RecQ zinc-binding MSIP34_RS07755 PF09382 RQC domain MSIP34_RS07755 PF00271 Helicase conserved C-terminal domain MSIP34_RS07755 PF00570 HRDC domain MSIP34_RS07755 PF00270 DEAD/DEAH box helicase MSIP34_RS07760 PF07690 Major Facilitator Superfamily MSIP34_RS07765 PF13186 Iron-sulfur cluster-binding domain MSIP34_RS07765 PF04055 Radical SAM superfamily MSIP34_RS07770 PF05402 Coenzyme PQQ synthesis protein D (PqqD) MSIP34_RS07775 PF03070 TENA/THI-4/PQQC family MSIP34_RS07780 PF12706 Beta-lactamase superfamily domain MSIP34_RS07785 PF18152 DAHP synthase ferredoxin-like domain MSIP34_RS07785 PF00793 DAHP synthetase I family MSIP34_RS07790 PF00155 Aminotransferase class I and II MSIP34_RS07795 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS07800 PF01842 ACT domain MSIP34_RS07800 PF00800 Prephenate dehydratase MSIP34_RS07800 PF01817 Chorismate mutase type II MSIP34_RS07805 PF00266 Aminotransferase class-V MSIP34_RS07810 PF03989 DNA gyrase C-terminal domain, beta-propeller MSIP34_RS07810 PF00521 DNA gyrase/topoisomerase IV, subunit A MSIP34_RS07815 PF00578 AhpC/TSA family MSIP34_RS07815 PF10417 C-terminal domain of 1-Cys peroxiredoxin MSIP34_RS07830 PF01053 Cys/Met metabolism PLP-dependent enzyme MSIP34_RS07835 PF00156 Phosphoribosyl transferase domain MSIP34_RS07840 PF02674 Colicin V production protein MSIP34_RS07850 PF08245 Mur ligase middle domain MSIP34_RS07850 PF02875 Mur ligase family, glutamate ligase domain MSIP34_RS07855 PF01039 Carboxyl transferase domain MSIP34_RS07855 PF17848 Acetyl-coA carboxylase zinc finger domain MSIP34_RS07860 PF00290 Tryptophan synthase alpha chain MSIP34_RS07865 PF00291 Pyridoxal-phosphate dependent enzyme MSIP34_RS07870 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MSIP34_RS07875 PF01416 tRNA pseudouridine synthase MSIP34_RS07885 PF02774 Semialdehyde dehydrogenase, dimerisation domain MSIP34_RS07885 PF01118 Semialdehyde dehydrogenase, NAD binding domain MSIP34_RS07890 PF00180 Isocitrate/isopropylmalate dehydrogenase MSIP34_RS07895 PF00694 Aconitase C-terminal domain MSIP34_RS07905 PF00330 Aconitase family (aconitate hydratase) MSIP34_RS07910 PF04461 Protein of unknown function (DUF520) MSIP34_RS07920 PF06865 Pyrimidine/purine nucleoside phosphorylase MSIP34_RS07925 PF00764 Arginosuccinate synthase MSIP34_RS07935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MSIP34_RS07935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MSIP34_RS07940 PF00202 Aminotransferase class-III MSIP34_RS07970 PF00072 Response regulator receiver domain MSIP34_RS07970 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS07975 PF05231 MASE1 MSIP34_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS07975 PF07730 Histidine kinase MSIP34_RS07995 PF00672 HAMP domain MSIP34_RS07995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS07995 PF02203 Tar ligand binding domain homologue MSIP34_RS08010 PF03741 Integral membrane protein TerC family MSIP34_RS08015 PF08335 GlnD PII-uridylyltransferase MSIP34_RS08015 PF03710 Glutamate-ammonia ligase adenylyltransferase MSIP34_RS08020 PF16177 Acetyl-coenzyme A synthetase N-terminus MSIP34_RS08020 PF13193 AMP-binding enzyme C-terminal domain MSIP34_RS08020 PF00501 AMP-binding enzyme MSIP34_RS08030 PF00593 TonB dependent receptor MSIP34_RS08030 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS08040 PF04542 Sigma-70 region 2 MSIP34_RS08040 PF08281 Sigma-70, region 4 MSIP34_RS08055 PF04273 Putative phosphatase (DUF442) MSIP34_RS08055 PF00753 Metallo-beta-lactamase superfamily MSIP34_RS08060 PF16658 Class II release factor RF3, C-terminal domain MSIP34_RS08060 PF03144 Elongation factor Tu domain 2 MSIP34_RS08060 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS08075 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS08075 PF00072 Response regulator receiver domain MSIP34_RS08080 PF00360 Phytochrome region MSIP34_RS08080 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS08080 PF01590 GAF domain MSIP34_RS08080 PF08446 PAS fold MSIP34_RS08090 PF07859 alpha/beta hydrolase fold MSIP34_RS08100 PF07995 Glucose / Sorbosone dehydrogenase MSIP34_RS08105 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS08105 PF00563 EAL domain MSIP34_RS08105 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS08110 PF00392 Bacterial regulatory proteins, gntR family MSIP34_RS08110 PF00155 Aminotransferase class I and II MSIP34_RS08120 PF00384 Molybdopterin oxidoreductase MSIP34_RS08125 PF01636 Phosphotransferase enzyme family MSIP34_RS08130 PF00255 Glutathione peroxidase MSIP34_RS08135 PF01757 Acyltransferase family MSIP34_RS08150 PF00717 Peptidase S24-like MSIP34_RS08155 PF11799 impB/mucB/samB family C-terminal domain MSIP34_RS08155 PF13438 Domain of unknown function (DUF4113) MSIP34_RS08155 PF11798 IMS family HHH motif MSIP34_RS08155 PF00817 impB/mucB/samB family MSIP34_RS08475 PF00589 Phage integrase family MSIP34_RS08475 PF13356 Arm DNA-binding domain MSIP34_RS08485 PF00211 Adenylate and Guanylate cyclase catalytic domain MSIP34_RS08490 PF12170 DNA polymerase III tau subunit V interacting with alpha MSIP34_RS08490 PF12169 DNA polymerase III subunits gamma and tau domain III MSIP34_RS08490 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MSIP34_RS08495 PF02575 YbaB/EbfC DNA-binding family MSIP34_RS08500 PF02132 RecR protein MSIP34_RS08500 PF13662 Toprim domain MSIP34_RS08505 PF13419 Haloacid dehalogenase-like hydrolase MSIP34_RS08515 PF01979 Amidohydrolase family MSIP34_RS08520 PF00691 OmpA family MSIP34_RS08520 PF01389 OmpA-like transmembrane domain MSIP34_RS08525 PF04476 4-HFC-P synthase MSIP34_RS08545 PF00709 Adenylosuccinate synthetase MSIP34_RS08550 PF13393 Histidyl-tRNA synthetase MSIP34_RS08555 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MSIP34_RS08560 PF01145 SPFH domain / Band 7 family MSIP34_RS08565 PF12221 Bacterial membrane protein N terminal MSIP34_RS08565 PF01145 SPFH domain / Band 7 family MSIP34_RS08570 PF16360 GTP-binding GTPase Middle Region MSIP34_RS08570 PF13167 GTP-binding GTPase N-terminal MSIP34_RS08570 PF01926 50S ribosome-binding GTPase MSIP34_RS08575 PF17209 Hfq protein MSIP34_RS08580 PF00749 tRNA synthetases class I (E and Q), catalytic domain MSIP34_RS08590 PF02321 Outer membrane efflux protein MSIP34_RS08595 PF00873 AcrB/AcrD/AcrF family MSIP34_RS08600 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS08600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS08605 PF00440 Bacterial regulatory proteins, tetR family MSIP34_RS08605 PF08361 MAATS-type transcriptional repressor, C-terminal region MSIP34_RS08610 PF00563 EAL domain MSIP34_RS08610 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS08610 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS08620 PF18693 TRAM domain MSIP34_RS08620 PF04055 Radical SAM superfamily MSIP34_RS08620 PF00919 Uncharacterized protein family UPF0004 MSIP34_RS08645 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS08645 PF00593 TonB dependent receptor MSIP34_RS08650 PF02578 Multi-copper polyphenol oxidoreductase laccase MSIP34_RS08655 PF00849 RNA pseudouridylate synthase MSIP34_RS08660 PF13525 Outer membrane lipoprotein MSIP34_RS08665 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MSIP34_RS08665 PF01926 50S ribosome-binding GTPase MSIP34_RS08670 PF13360 PQQ-like domain MSIP34_RS08670 PF13570 PQQ-like domain MSIP34_RS08675 PF09976 Tetratricopeptide repeat-like domain MSIP34_RS08690 PF03129 Anticodon binding domain MSIP34_RS08690 PF13393 Histidyl-tRNA synthetase MSIP34_RS08695 PF04551 GcpE protein MSIP34_RS08710 PF04055 Radical SAM superfamily MSIP34_RS08715 PF00334 Nucleoside diphosphate kinase MSIP34_RS08720 PF08032 RNA 2'-O ribose methyltransferase substrate binding MSIP34_RS08720 PF00588 SpoU rRNA Methylase family MSIP34_RS08725 PF08206 Ribonuclease B OB domain MSIP34_RS08725 PF08461 Ribonuclease R winged-helix domain MSIP34_RS08725 PF00575 S1 RNA binding domain MSIP34_RS08725 PF17876 Cold shock domain MSIP34_RS08725 PF00773 RNB domain MSIP34_RS08735 PF00156 Phosphoribosyl transferase domain MSIP34_RS08740 PF02719 Polysaccharide biosynthesis protein MSIP34_RS08745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MSIP34_RS08745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MSIP34_RS08745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MSIP34_RS08750 PF00106 short chain dehydrogenase MSIP34_RS08755 PF04055 Radical SAM superfamily MSIP34_RS08760 PF01479 S4 domain MSIP34_RS08765 PF13654 AAA domain MSIP34_RS08765 PF05362 Lon protease (S16) C-terminal proteolytic domain MSIP34_RS08770 PF02391 MoaE protein MSIP34_RS08775 PF02597 ThiS family MSIP34_RS08780 PF02646 RmuC family MSIP34_RS08795 PF01435 Peptidase family M48 MSIP34_RS08800 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS08800 PF03144 Elongation factor Tu domain 2 MSIP34_RS08800 PF00679 Elongation factor G C-terminus MSIP34_RS08805 PF00270 DEAD/DEAH box helicase MSIP34_RS08805 PF00271 Helicase conserved C-terminal domain MSIP34_RS08810 PF00271 Helicase conserved C-terminal domain MSIP34_RS08810 PF00270 DEAD/DEAH box helicase MSIP34_RS08820 PF02222 ATP-grasp domain MSIP34_RS08820 PF01370 NAD dependent epimerase/dehydratase family MSIP34_RS08825 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS08825 PF00072 Response regulator receiver domain MSIP34_RS08825 PF00158 Sigma-54 interaction domain MSIP34_RS08830 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS08830 PF00593 TonB dependent receptor MSIP34_RS08840 PF00005 ABC transporter MSIP34_RS08845 PF13472 GDSL-like Lipase/Acylhydrolase family MSIP34_RS08850 PF11734 TilS substrate C-terminal domain MSIP34_RS08850 PF01171 PP-loop family MSIP34_RS08850 PF09179 TilS substrate binding domain MSIP34_RS08855 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MSIP34_RS08860 PF07733 Bacterial DNA polymerase III alpha NTPase domain MSIP34_RS08860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MSIP34_RS08860 PF01336 OB-fold nucleic acid binding domain MSIP34_RS08860 PF14579 Helix-hairpin-helix motif MSIP34_RS08860 PF02811 PHP domain MSIP34_RS08865 PF01584 CheW-like domain MSIP34_RS08865 PF00072 Response regulator receiver domain MSIP34_RS08865 PF01584 CheW-like domain MSIP34_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS08865 PF02895 Signal transducing histidine kinase, homodimeric domain MSIP34_RS08865 PF02895 Signal transducing histidine kinase, homodimeric domain MSIP34_RS08865 PF01627 Hpt domain MSIP34_RS08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS08865 PF01627 Hpt domain MSIP34_RS08865 PF00072 Response regulator receiver domain MSIP34_RS08870 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MSIP34_RS08870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS08880 PF00072 Response regulator receiver domain MSIP34_RS08885 PF00072 Response regulator receiver domain MSIP34_RS08895 PF08534 Redoxin MSIP34_RS08905 PF00343 Carbohydrate phosphorylase MSIP34_RS08910 PF02472 Biopolymer transport protein ExbD/TolR MSIP34_RS08915 PF01618 MotA/TolQ/ExbB proton channel family MSIP34_RS08930 PF01479 S4 domain MSIP34_RS08930 PF00163 Ribosomal protein S4/S9 N-terminal domain MSIP34_RS08945 PF00183 Hsp90 protein MSIP34_RS08955 PF00296 Luciferase-like monooxygenase MSIP34_RS08960 PF07690 Major Facilitator Superfamily MSIP34_RS08965 PF00593 TonB dependent receptor MSIP34_RS08965 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS08975 PF00899 ThiF family MSIP34_RS08985 PF01648 4'-phosphopantetheinyl transferase superfamily MSIP34_RS08990 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MSIP34_RS08995 PF02565 Recombination protein O C terminal MSIP34_RS08995 PF11967 Recombination protein O N terminal MSIP34_RS09000 PF07650 KH domain MSIP34_RS09000 PF01926 50S ribosome-binding GTPase MSIP34_RS09005 PF14622 Ribonuclease-III-like MSIP34_RS09005 PF00035 Double-stranded RNA binding motif MSIP34_RS09015 PF10502 Signal peptidase, peptidase S26 MSIP34_RS09020 PF06421 GTP-binding protein LepA C-terminus MSIP34_RS09020 PF03144 Elongation factor Tu domain 2 MSIP34_RS09020 PF00009 Elongation factor Tu GTP binding domain MSIP34_RS09020 PF00679 Elongation factor G C-terminus MSIP34_RS09025 PF13180 PDZ domain MSIP34_RS09030 PF03888 MucB/RseB N-terminal domain MSIP34_RS09030 PF17188 MucB/RseB C-terminal domain MSIP34_RS09040 PF04542 Sigma-70 region 2 MSIP34_RS09040 PF08281 Sigma-70, region 4 MSIP34_RS09045 PF02910 Fumarate reductase flavoprotein C-term MSIP34_RS09045 PF00890 FAD binding domain MSIP34_RS09060 PF05114 Protein of unknown function (DUF692) MSIP34_RS09075 PF04542 Sigma-70 region 2 MSIP34_RS09075 PF08281 Sigma-70, region 4 MSIP34_RS09075 PF12680 SnoaL-like domain MSIP34_RS09090 PF00730 HhH-GPD superfamily base excision DNA repair protein MSIP34_RS09090 PF00633 Helix-hairpin-helix motif MSIP34_RS09090 PF10576 Iron-sulfur binding domain of endonuclease III MSIP34_RS09095 PF04060 Putative Fe-S cluster MSIP34_RS09100 PF00701 Dihydrodipicolinate synthetase family MSIP34_RS09105 PF06804 NlpB/DapX lipoprotein MSIP34_RS09110 PF00753 Metallo-beta-lactamase superfamily MSIP34_RS09110 PF16123 Hydroxyacylglutathione hydrolase C-terminus MSIP34_RS09130 PF08007 Cupin superfamily protein MSIP34_RS09135 PF00578 AhpC/TSA family MSIP34_RS09140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MSIP34_RS09150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MSIP34_RS09155 PF01943 Polysaccharide biosynthesis protein MSIP34_RS09160 PF00535 Glycosyl transferase family 2 MSIP34_RS09165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MSIP34_RS09165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MSIP34_RS09165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MSIP34_RS09170 PF13360 PQQ-like domain MSIP34_RS09180 PF03960 ArsC family MSIP34_RS09190 PF05188 MutS domain II MSIP34_RS09190 PF05192 MutS domain III MSIP34_RS09190 PF05190 MutS family domain IV MSIP34_RS09190 PF00488 MutS domain V MSIP34_RS09190 PF01624 MutS domain I MSIP34_RS09195 PF01464 Transglycosylase SLT domain MSIP34_RS09200 PF00483 Nucleotidyl transferase MSIP34_RS09205 PF16363 GDP-mannose 4,6 dehydratase MSIP34_RS09210 PF00483 Nucleotidyl transferase MSIP34_RS09210 PF01050 Mannose-6-phosphate isomerase MSIP34_RS09230 PF13439 Glycosyltransferase Family 4 MSIP34_RS09230 PF00534 Glycosyl transferases group 1 MSIP34_RS09240 PF00535 Glycosyl transferase family 2 MSIP34_RS09255 PF00535 Glycosyl transferase family 2 MSIP34_RS09260 PF04230 Polysaccharide pyruvyl transferase MSIP34_RS09275 PF09721 Transmembrane exosortase (Exosortase_EpsH) MSIP34_RS09310 PF03472 Autoinducer binding domain MSIP34_RS09310 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS09315 PF02397 Bacterial sugar transferase MSIP34_RS09325 PF00459 Inositol monophosphatase family MSIP34_RS09330 PF00588 SpoU rRNA Methylase family MSIP34_RS09335 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS09340 PF02082 Transcriptional regulator MSIP34_RS09345 PF00266 Aminotransferase class-V MSIP34_RS09350 PF00266 Aminotransferase class-V MSIP34_RS09355 PF01592 NifU-like N terminal domain MSIP34_RS09360 PF01521 Iron-sulphur cluster biosynthesis MSIP34_RS09365 PF07743 HSCB C-terminal oligomerisation domain MSIP34_RS09365 PF00226 DnaJ domain MSIP34_RS09370 PF00012 Hsp70 protein MSIP34_RS09375 PF00111 2Fe-2S iron-sulfur cluster binding domain MSIP34_RS09380 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS09380 PF00563 EAL domain MSIP34_RS09380 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS09395 PF00152 tRNA synthetases class II (D, K and N) MSIP34_RS09395 PF01336 OB-fold nucleic acid binding domain MSIP34_RS09400 PF03462 PCRF domain MSIP34_RS09400 PF00472 RF-1 domain MSIP34_RS09405 PF12849 PBP superfamily domain MSIP34_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS09420 PF00005 ABC transporter MSIP34_RS09425 PF01266 FAD dependent oxidoreductase MSIP34_RS09430 PF00534 Glycosyl transferases group 1 MSIP34_RS09430 PF13439 Glycosyltransferase Family 4 MSIP34_RS09440 PF01219 Prokaryotic diacylglycerol kinase MSIP34_RS09460 PF01569 PAP2 superfamily MSIP34_RS09465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MSIP34_RS09465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MSIP34_RS09465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MSIP34_RS09465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MSIP34_RS09470 PF00809 Pterin binding enzyme MSIP34_RS09475 PF01434 Peptidase family M41 MSIP34_RS09475 PF06480 FtsH Extracellular MSIP34_RS09475 PF17862 AAA+ lid domain MSIP34_RS09475 PF00004 ATPase family associated with various cellular activities (AAA) MSIP34_RS09480 PF01728 FtsJ-like methyltransferase MSIP34_RS09485 PF01985 CRS1 / YhbY (CRM) domain MSIP34_RS09495 PF01272 Transcription elongation factor, GreA/GreB, C-term MSIP34_RS09495 PF03449 Transcription elongation factor, N-terminal MSIP34_RS09500 PF02142 MGS-like domain MSIP34_RS09500 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MSIP34_RS09500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MSIP34_RS09505 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MSIP34_RS09505 PF00117 Glutamine amidotransferase class-I MSIP34_RS09510 PF05173 Dihydrodipicolinate reductase, C-terminus MSIP34_RS09510 PF01113 Dihydrodipicolinate reductase, N-terminus MSIP34_RS09515 PF04355 SmpA / OmlA family MSIP34_RS09520 PF01475 Ferric uptake regulator family MSIP34_RS09525 PF02463 RecF/RecN/SMC N terminal domain MSIP34_RS09530 PF01513 ATP-NAD kinase MSIP34_RS09540 PF01628 HrcA protein C terminal domain MSIP34_RS09550 PF00762 Ferrochelatase MSIP34_RS09555 PF01370 NAD dependent epimerase/dehydratase family MSIP34_RS09560 PF13580 SIS domain MSIP34_RS09565 PF00294 pfkB family carbohydrate kinase MSIP34_RS09565 PF01467 Cytidylyltransferase-like MSIP34_RS09570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MSIP34_RS09595 PF01081 KDPG and KHG aldolase MSIP34_RS09600 PF00920 Dehydratase family MSIP34_RS09605 PF02543 Carbamoyltransferase N-terminus MSIP34_RS09605 PF16861 Carbamoyltransferase C-terminus MSIP34_RS09630 PF00534 Glycosyl transferases group 1 MSIP34_RS09630 PF13439 Glycosyltransferase Family 4 MSIP34_RS09635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MSIP34_RS09640 PF01025 GrpE MSIP34_RS09645 PF00012 Hsp70 protein MSIP34_RS09650 PF01556 DnaJ C terminal domain MSIP34_RS09650 PF00226 DnaJ domain MSIP34_RS09650 PF00684 DnaJ central domain MSIP34_RS09655 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MSIP34_RS09685 PF08502 LeuA allosteric (dimerisation) domain MSIP34_RS09685 PF00682 HMGL-like MSIP34_RS09690 PF07859 alpha/beta hydrolase fold MSIP34_RS09695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MSIP34_RS09700 PF12729 Four helix bundle sensory module for signal transduction MSIP34_RS09700 PF00672 HAMP domain MSIP34_RS09700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS09705 PF00037 4Fe-4S binding domain MSIP34_RS09710 PF01467 Cytidylyltransferase-like MSIP34_RS09720 PF05193 Peptidase M16 inactive domain MSIP34_RS09725 PF05193 Peptidase M16 inactive domain MSIP34_RS09725 PF00675 Insulinase (Peptidase family M16) MSIP34_RS09730 PF02881 SRP54-type protein, helical bundle domain MSIP34_RS09730 PF00448 SRP54-type protein, GTPase domain MSIP34_RS09735 PF00005 ABC transporter MSIP34_RS09740 PF18075 FtsX extracellular domain MSIP34_RS09745 PF00925 GTP cyclohydrolase II MSIP34_RS09745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MSIP34_RS09750 PF00175 Oxidoreductase NAD-binding domain MSIP34_RS09750 PF00970 Oxidoreductase FAD-binding domain MSIP34_RS09755 PF00766 Electron transfer flavoprotein FAD-binding domain MSIP34_RS09755 PF01012 Electron transfer flavoprotein domain MSIP34_RS09760 PF01012 Electron transfer flavoprotein domain MSIP34_RS09765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS09765 PF03466 LysR substrate binding domain MSIP34_RS09775 PF03831 PhnA domain MSIP34_RS09775 PF08274 PhnA Zinc-Ribbon MSIP34_RS09780 PF05724 Thiopurine S-methyltransferase (TPMT) MSIP34_RS09800 PF01053 Cys/Met metabolism PLP-dependent enzyme MSIP34_RS09815 PF00005 ABC transporter MSIP34_RS09830 PF02653 Branched-chain amino acid transport system / permease component MSIP34_RS09835 PF00005 ABC transporter MSIP34_RS09835 PF12399 Branched-chain amino acid ATP-binding cassette transporter MSIP34_RS09845 PF00296 Luciferase-like monooxygenase MSIP34_RS09850 PF03358 NADPH-dependent FMN reductase MSIP34_RS09855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MSIP34_RS09855 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MSIP34_RS09865 PF02321 Outer membrane efflux protein MSIP34_RS09870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS09875 PF00873 AcrB/AcrD/AcrF family MSIP34_RS09885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MSIP34_RS09885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MSIP34_RS09890 PF00296 Luciferase-like monooxygenase MSIP34_RS09895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MSIP34_RS09895 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MSIP34_RS09900 PF00158 Sigma-54 interaction domain MSIP34_RS09905 PF00925 GTP cyclohydrolase II MSIP34_RS09910 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS09910 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS09910 PF00563 EAL domain MSIP34_RS09915 PF01734 Patatin-like phospholipase MSIP34_RS09925 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS09925 PF00593 TonB dependent receptor MSIP34_RS09930 PF07690 Major Facilitator Superfamily MSIP34_RS09945 PF00884 Sulfatase MSIP34_RS09950 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS09950 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS09950 PF00563 EAL domain MSIP34_RS09955 PF03358 NADPH-dependent FMN reductase MSIP34_RS09960 PF13673 Acetyltransferase (GNAT) domain MSIP34_RS09970 PF02470 MlaD protein MSIP34_RS09975 PF04403 Paraquat-inducible protein A MSIP34_RS09980 PF04403 Paraquat-inducible protein A MSIP34_RS09995 PF00892 EamA-like transporter family MSIP34_RS10000 PF01566 Natural resistance-associated macrophage protein MSIP34_RS10020 PF03412 Peptidase C39 family MSIP34_RS10020 PF00005 ABC transporter MSIP34_RS10020 PF00664 ABC transporter transmembrane region MSIP34_RS10035 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS10065 PF00140 Sigma-70 factor, region 1.2 MSIP34_RS10065 PF04545 Sigma-70, region 4 MSIP34_RS10065 PF04542 Sigma-70 region 2 MSIP34_RS10070 PF03597 Cytochrome oxidase maturation protein cbb3-type MSIP34_RS10075 PF00350 Dynamin family MSIP34_RS10085 PF01209 ubiE/COQ5 methyltransferase family MSIP34_RS10095 PF03109 ABC1 family MSIP34_RS10110 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MSIP34_RS10110 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MSIP34_RS10110 PF06827 Zinc finger found in FPG and IleRS MSIP34_RS10130 PF00005 ABC transporter MSIP34_RS10140 PF03550 Outer membrane lipoprotein LolB MSIP34_RS10145 PF08544 GHMP kinases C terminal MSIP34_RS10145 PF00288 GHMP kinases N terminal domain MSIP34_RS10155 PF14572 Phosphoribosyl synthetase-associated domain MSIP34_RS10155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MSIP34_RS10160 PF01386 Ribosomal L25p family MSIP34_RS10160 PF14693 Ribosomal protein TL5, C-terminal domain MSIP34_RS10165 PF01195 Peptidyl-tRNA hydrolase MSIP34_RS10170 PF06071 Protein of unknown function (DUF933) MSIP34_RS10170 PF01926 50S ribosome-binding GTPase MSIP34_RS10240 PF00933 Glycosyl hydrolase family 3 N terminal domain MSIP34_RS10255 PF08401 Domain of unknown function (DUF1738) MSIP34_RS10255 PF13362 Toprim domain MSIP34_RS10255 PF18818 Metallopeptidase superfamily domain MSIP34_RS10340 PF03389 MobA/MobL family MSIP34_RS10340 PF17841 BID domain of Bartonella effector protein (Bep) MSIP34_RS10340 PF01443 Viral (Superfamily 1) RNA helicase MSIP34_RS10515 PF02463 RecF/RecN/SMC N terminal domain MSIP34_RS10515 PF06470 SMC proteins Flexible Hinge Domain MSIP34_RS10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS10520 PF03466 LysR substrate binding domain MSIP34_RS10525 PF00361 Proton-conducting membrane transporter MSIP34_RS10525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MSIP34_RS10530 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) MSIP34_RS10550 PF00565 Staphylococcal nuclease homologue MSIP34_RS10555 PF08019 Phosphoethanolamine transferase EptA/EptB MSIP34_RS10555 PF00884 Sulfatase MSIP34_RS10580 PF04717 Type VI secretion system, phage-baseplate injector MSIP34_RS10590 PF02678 Pirin MSIP34_RS10590 PF05726 Pirin C-terminal cupin domain MSIP34_RS10595 PF02525 Flavodoxin-like fold MSIP34_RS10600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS10600 PF03466 LysR substrate binding domain MSIP34_RS10605 PF01726 LexA DNA binding domain MSIP34_RS10605 PF00717 Peptidase S24-like MSIP34_RS10625 PF00072 Response regulator receiver domain MSIP34_RS10625 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS10630 PF00672 HAMP domain MSIP34_RS10630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS10630 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS10635 PF10414 Sirohaem synthase dimerisation region MSIP34_RS10635 PF14824 Sirohaem biosynthesis protein central MSIP34_RS10635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MSIP34_RS10640 PF05171 Haemin-degrading HemS.ChuX domain MSIP34_RS10645 PF01497 Periplasmic binding protein MSIP34_RS10650 PF01032 FecCD transport family MSIP34_RS10655 PF00005 ABC transporter MSIP34_RS10660 PF04055 Radical SAM superfamily MSIP34_RS10660 PF01938 TRAM domain MSIP34_RS10660 PF00919 Uncharacterized protein family UPF0004 MSIP34_RS10665 PF02562 PhoH-like protein MSIP34_RS10670 PF02130 Uncharacterized protein family UPF0054 MSIP34_RS10675 PF03471 Transporter associated domain MSIP34_RS10675 PF00571 CBS domain MSIP34_RS10685 PF01741 Large-conductance mechanosensitive channel, MscL MSIP34_RS10690 PF00795 Carbon-nitrogen hydrolase MSIP34_RS10695 PF02091 Glycyl-tRNA synthetase alpha subunit MSIP34_RS10700 PF02092 Glycyl-tRNA synthetase beta subunit MSIP34_RS10700 PF05746 DALR anticodon binding domain MSIP34_RS10720 PF02082 Transcriptional regulator MSIP34_RS10725 PF00970 Oxidoreductase FAD-binding domain MSIP34_RS10725 PF00042 Globin MSIP34_RS10725 PF00175 Oxidoreductase NAD-binding domain MSIP34_RS10735 PF00210 Ferritin-like domain MSIP34_RS10740 PF00210 Ferritin-like domain MSIP34_RS10745 PF00403 Heavy-metal-associated domain MSIP34_RS10755 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase MSIP34_RS10755 PF13746 4Fe-4S dicluster domain MSIP34_RS10755 PF12801 4Fe-4S binding domain MSIP34_RS10760 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP MSIP34_RS10760 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MSIP34_RS10760 PF00034 Cytochrome c MSIP34_RS10770 PF00115 Cytochrome C and Quinol oxidase polypeptide I MSIP34_RS10775 PF03922 OmpW family MSIP34_RS10780 PF01063 Amino-transferase class IV MSIP34_RS10785 PF01177 Asp/Glu/Hydantoin racemase MSIP34_RS10790 PF01923 Cobalamin adenosyltransferase MSIP34_RS10800 PF07396 Phosphate-selective porin O and P MSIP34_RS10815 PF03459 TOBE domain MSIP34_RS10820 PF00266 Aminotransferase class-V MSIP34_RS10830 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS10845 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS10850 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS10855 PF17850 CysA C-terminal regulatory domain MSIP34_RS10855 PF12857 TOBE-like domain MSIP34_RS10855 PF00005 ABC transporter MSIP34_RS10865 PF04143 Sulphur transport MSIP34_RS10875 PF01743 Poly A polymerase head domain MSIP34_RS10875 PF12626 Polymerase A arginine-rich C-terminus MSIP34_RS10875 PF12627 Probable RNA and SrmB- binding site of polymerase A MSIP34_RS10880 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MSIP34_RS10890 PF02548 Ketopantoate hydroxymethyltransferase MSIP34_RS10895 PF02569 Pantoate-beta-alanine ligase MSIP34_RS10910 PF04773 FecR protein MSIP34_RS10910 PF16220 Domain of unknown function (DUF4880) MSIP34_RS10920 PF02261 Aspartate decarboxylase MSIP34_RS10930 PF02590 Predicted SPOUT methyltransferase MSIP34_RS10935 PF03441 FAD binding domain of DNA photolyase MSIP34_RS10935 PF00875 DNA photolyase MSIP34_RS10940 PF00083 Sugar (and other) transporter MSIP34_RS10950 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MSIP34_RS10955 PF04333 MlaA lipoprotein MSIP34_RS10960 PF01523 Putative modulator of DNA gyrase MSIP34_RS10965 PF04751 Protein of unknown function (DUF615) MSIP34_RS10975 PF02163 Peptidase family M50 MSIP34_RS10975 PF13180 PDZ domain MSIP34_RS10980 PF00994 Probable molybdopterin binding domain MSIP34_RS10985 PF02769 AIR synthase related protein, C-terminal domain MSIP34_RS10985 PF00586 AIR synthase related protein, N-terminal domain MSIP34_RS10995 PF04608 Phosphatidylglycerophosphatase A MSIP34_RS11000 PF02464 Competence-damaged protein MSIP34_RS11010 PF00154 recA bacterial DNA recombination protein MSIP34_RS11015 PF02631 RecX family MSIP34_RS11020 PF01411 tRNA synthetases class II (A) MSIP34_RS11020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MSIP34_RS11020 PF02272 DHHA1 domain MSIP34_RS11025 PF13840 ACT domain MSIP34_RS11025 PF00696 Amino acid kinase family MSIP34_RS11025 PF01842 ACT domain MSIP34_RS11055 PF00199 Catalase MSIP34_RS11055 PF06628 Catalase-related immune-responsive MSIP34_RS11055 PF18011 C-terminal domain found in long catalases MSIP34_RS11070 PF00672 HAMP domain MSIP34_RS11070 PF02203 Tar ligand binding domain homologue MSIP34_RS11070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS11075 PF00390 Malic enzyme, N-terminal domain MSIP34_RS11075 PF03949 Malic enzyme, NAD binding domain MSIP34_RS11085 PF00873 AcrB/AcrD/AcrF family MSIP34_RS11105 PF00360 Phytochrome region MSIP34_RS11105 PF01590 GAF domain MSIP34_RS11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS11105 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS11105 PF08446 PAS fold MSIP34_RS11110 PF00072 Response regulator receiver domain MSIP34_RS11115 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS11115 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS11115 PF00563 EAL domain MSIP34_RS11120 PF07995 Glucose / Sorbosone dehydrogenase MSIP34_RS11125 PF00478 IMP dehydrogenase / GMP reductase domain MSIP34_RS11125 PF00571 CBS domain MSIP34_RS11130 PF04305 Protein of unknown function (DUF455) MSIP34_RS11140 PF00881 Nitroreductase family MSIP34_RS11145 PF03618 Kinase/pyrophosphorylase MSIP34_RS11150 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MSIP34_RS11150 PF02896 PEP-utilising enzyme, TIM barrel domain MSIP34_RS11150 PF00391 PEP-utilising enzyme, mobile domain MSIP34_RS11180 PF07152 YaeQ protein MSIP34_RS11190 PF02978 Signal peptide binding domain MSIP34_RS11190 PF00448 SRP54-type protein, GTPase domain MSIP34_RS11190 PF02881 SRP54-type protein, helical bundle domain MSIP34_RS11195 PF01578 Cytochrome C assembly protein MSIP34_RS11210 PF00682 HMGL-like MSIP34_RS11210 PF08502 LeuA allosteric (dimerisation) domain MSIP34_RS11215 PF01066 CDP-alcohol phosphatidyltransferase MSIP34_RS11220 PF01702 Queuine tRNA-ribosyltransferase MSIP34_RS11225 PF02699 Preprotein translocase subunit MSIP34_RS11230 PF13721 SecD export protein N-terminal TM region MSIP34_RS11230 PF02355 Protein export membrane protein MSIP34_RS11230 PF07549 SecD/SecF GG Motif MSIP34_RS11235 PF07549 SecD/SecF GG Motif MSIP34_RS11235 PF02355 Protein export membrane protein MSIP34_RS11240 PF01595 Cyclin M transmembrane N-terminal domain MSIP34_RS11240 PF03471 Transporter associated domain MSIP34_RS11240 PF00571 CBS domain MSIP34_RS11245 PF02617 ATP-dependent Clp protease adaptor protein ClpS MSIP34_RS11250 PF10431 C-terminal, D2-small domain, of ClpB protein MSIP34_RS11250 PF02861 Clp amino terminal domain, pathogenicity island component MSIP34_RS11250 PF17871 AAA lid domain MSIP34_RS11250 PF00004 ATPase family associated with various cellular activities (AAA) MSIP34_RS11250 PF07724 AAA domain (Cdc48 subfamily) MSIP34_RS11270 PF01180 Dihydroorotate dehydrogenase MSIP34_RS11275 PF00543 Nitrogen regulatory protein P-II MSIP34_RS11280 PF00873 AcrB/AcrD/AcrF family MSIP34_RS11285 PF00543 Nitrogen regulatory protein P-II MSIP34_RS11290 PF00873 AcrB/AcrD/AcrF family MSIP34_RS11310 PF01406 tRNA synthetases class I (C) catalytic domain MSIP34_RS11310 PF09190 DALR domain MSIP34_RS11325 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MSIP34_RS11330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MSIP34_RS11335 PF00149 Calcineurin-like phosphoesterase MSIP34_RS11345 PF01029 NusB family MSIP34_RS11350 PF00885 6,7-dimethyl-8-ribityllumazine synthase MSIP34_RS11355 PF07690 Major Facilitator Superfamily MSIP34_RS11360 PF00072 Response regulator receiver domain MSIP34_RS11360 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS11365 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS11365 PF11808 Phosphate regulon sensor protein PhoR MSIP34_RS11365 PF00989 PAS fold MSIP34_RS11365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS11375 PF13183 4Fe-4S dicluster domain MSIP34_RS11375 PF02754 Cysteine-rich domain MSIP34_RS11380 PF00578 AhpC/TSA family MSIP34_RS11385 PF03653 Uncharacterised protein family (UPF0093) MSIP34_RS11405 PF00294 pfkB family carbohydrate kinase MSIP34_RS11420 PF01553 Acyltransferase MSIP34_RS11425 PF00149 Calcineurin-like phosphoesterase MSIP34_RS11430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III MSIP34_RS11445 PF13532 2OG-Fe(II) oxygenase superfamily MSIP34_RS11455 PF02547 Queuosine biosynthesis protein MSIP34_RS11465 PF01464 Transglycosylase SLT domain MSIP34_RS11465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MSIP34_RS11470 PF04073 Aminoacyl-tRNA editing domain MSIP34_RS11470 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MSIP34_RS11470 PF03129 Anticodon binding domain MSIP34_RS11495 PF03167 Uracil DNA glycosylase superfamily MSIP34_RS11500 PF00583 Acetyltransferase (GNAT) family MSIP34_RS11505 PF00814 Glycoprotease family MSIP34_RS11510 PF00472 RF-1 domain MSIP34_RS11520 PF12843 Putative quorum-sensing-regulated virulence factor MSIP34_RS11535 PF00892 EamA-like transporter family MSIP34_RS11540 PF00118 TCP-1/cpn60 chaperonin family MSIP34_RS11545 PF00166 Chaperonin 10 Kd subunit MSIP34_RS11560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MSIP34_RS11560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MSIP34_RS11570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS11570 PF03466 LysR substrate binding domain MSIP34_RS11575 PF13307 Helicase C-terminal domain MSIP34_RS11575 PF04851 Type III restriction enzyme, res subunit MSIP34_RS11595 PF00248 Aldo/keto reductase family MSIP34_RS11615 PF00563 EAL domain MSIP34_RS11615 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS11615 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS11620 PF01979 Amidohydrolase family MSIP34_RS11625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MSIP34_RS11635 PF02021 Uncharacterised protein family UPF0102 MSIP34_RS11640 PF13580 SIS domain MSIP34_RS11645 PF04972 BON domain MSIP34_RS11655 PF00578 AhpC/TSA family MSIP34_RS11670 PF00563 EAL domain MSIP34_RS11670 PF05231 MASE1 MSIP34_RS11675 PF00085 Thioredoxin MSIP34_RS11680 PF07498 Rho termination factor, N-terminal domain MSIP34_RS11680 PF07497 Rho termination factor, RNA-binding domain MSIP34_RS11680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MSIP34_RS11685 PF01197 Ribosomal protein L31 MSIP34_RS11695 PF00005 ABC transporter MSIP34_RS11695 PF03459 TOBE domain MSIP34_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS11715 PF03459 TOBE domain MSIP34_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS11720 PF06463 Molybdenum Cofactor Synthesis C MSIP34_RS11720 PF04055 Radical SAM superfamily MSIP34_RS11725 PF12804 MobA-like NTP transferase domain MSIP34_RS11730 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MSIP34_RS11735 PF03454 MoeA C-terminal region (domain IV) MSIP34_RS11735 PF03453 MoeA N-terminal region (domain I and II) MSIP34_RS11735 PF00994 Probable molybdopterin binding domain MSIP34_RS11745 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS11745 PF00593 TonB dependent receptor MSIP34_RS11755 PF01292 Prokaryotic cytochrome b561 MSIP34_RS11765 PF03544 Gram-negative bacterial TonB protein C-terminal MSIP34_RS11770 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS11770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS11775 PF00578 AhpC/TSA family MSIP34_RS11780 PF13638 PIN domain MSIP34_RS11780 PF02562 PhoH-like protein MSIP34_RS11785 PF07690 Major Facilitator Superfamily MSIP34_RS11790 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS11805 PF00497 Bacterial extracellular solute-binding proteins, family 3 MSIP34_RS11810 PF13360 PQQ-like domain MSIP34_RS11815 PF00561 alpha/beta hydrolase fold MSIP34_RS11820 PF03631 Virulence factor BrkB MSIP34_RS11825 PF00581 Rhodanese-like domain MSIP34_RS11825 PF17773 UPF0176 acylphosphatase like domain MSIP34_RS11830 PF00296 Luciferase-like monooxygenase MSIP34_RS11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS11840 PF03466 LysR substrate binding domain MSIP34_RS11850 PF00106 short chain dehydrogenase MSIP34_RS11860 PF02661 Fic/DOC family MSIP34_RS11860 PF13784 Fic/DOC family N-terminal MSIP34_RS11885 PF00072 Response regulator receiver domain MSIP34_RS11885 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS11890 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS11895 PF01381 Helix-turn-helix MSIP34_RS11970 PF04539 Sigma-70 region 3 MSIP34_RS11970 PF04542 Sigma-70 region 2 MSIP34_RS11970 PF03979 Sigma-70 factor, region 1.1 MSIP34_RS11970 PF04546 Sigma-70, non-essential region MSIP34_RS11970 PF04545 Sigma-70, region 4 MSIP34_RS11970 PF00140 Sigma-70 factor, region 1.2 MSIP34_RS11975 PF10410 DnaB-helicase binding domain of primase MSIP34_RS11975 PF08278 DNA primase DnaG DnaB-binding MSIP34_RS11975 PF08275 DNA primase catalytic core, N-terminal domain MSIP34_RS11975 PF01807 CHC2 zinc finger MSIP34_RS11980 PF09424 Yqey-like protein MSIP34_RS11985 PF01165 Ribosomal protein S21 MSIP34_RS11990 PF00814 Glycoprotease family MSIP34_RS11995 PF02660 Glycerol-3-phosphate acyltransferase MSIP34_RS12000 PF02152 Dihydroneopterin aldolase MSIP34_RS12015 PF02899 Phage integrase, N-terminal SAM-like domain MSIP34_RS12015 PF00589 Phage integrase family MSIP34_RS12020 PF02805 Metal binding domain of Ada MSIP34_RS12020 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MSIP34_RS12020 PF12833 Helix-turn-helix domain MSIP34_RS12020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MSIP34_RS12025 PF01245 Ribosomal protein L19 MSIP34_RS12030 PF01746 tRNA (Guanine-1)-methyltransferase MSIP34_RS12035 PF01782 RimM N-terminal domain MSIP34_RS12035 PF05239 PRC-barrel domain MSIP34_RS12040 PF00886 Ribosomal protein S16 MSIP34_RS12045 PF06508 Queuosine biosynthesis protein QueC MSIP34_RS12050 PF04055 Radical SAM superfamily MSIP34_RS12060 PF00691 OmpA family MSIP34_RS12065 PF04052 TolB amino-terminal domain MSIP34_RS12065 PF07676 WD40-like Beta Propeller Repeat MSIP34_RS12075 PF02472 Biopolymer transport protein ExbD/TolR MSIP34_RS12080 PF01618 MotA/TolQ/ExbB proton channel family MSIP34_RS12085 PF03061 Thioesterase superfamily MSIP34_RS12090 PF05491 RuvB C-terminal winged helix domain MSIP34_RS12090 PF05496 Holliday junction DNA helicase RuvB P-loop domain MSIP34_RS12090 PF17864 RuvB AAA lid domain MSIP34_RS12095 PF01330 RuvA N terminal domain MSIP34_RS12095 PF07499 RuvA, C-terminal domain MSIP34_RS12100 PF02075 Crossover junction endodeoxyribonuclease RuvC MSIP34_RS12105 PF01709 Transcriptional regulator MSIP34_RS12110 PF00892 EamA-like transporter family MSIP34_RS12120 PF01047 MarR family MSIP34_RS12125 PF01380 SIS domain MSIP34_RS12125 PF00571 CBS domain MSIP34_RS12130 PF00999 Sodium/hydrogen exchanger family MSIP34_RS12130 PF02254 TrkA-N domain MSIP34_RS12135 PF02525 Flavodoxin-like fold MSIP34_RS12155 PF00117 Glutamine amidotransferase class-I MSIP34_RS12155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MSIP34_RS12175 PF01645 Conserved region in glutamate synthase MSIP34_RS12190 PF00120 Glutamine synthetase, catalytic domain MSIP34_RS12200 PF08669 Glycine cleavage T-protein C-terminal barrel domain MSIP34_RS12200 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS12200 PF17806 Sarcosine oxidase A3 domain MSIP34_RS12200 PF01571 Aminomethyltransferase folate-binding domain MSIP34_RS12210 PF01266 FAD dependent oxidoreductase MSIP34_RS12220 PF00583 Acetyltransferase (GNAT) family MSIP34_RS12225 PF02405 Permease MlaE MSIP34_RS12230 PF00005 ABC transporter MSIP34_RS12255 PF00563 EAL domain MSIP34_RS12255 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS12255 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS12260 PF00781 Diacylglycerol kinase catalytic domain MSIP34_RS12275 PF00563 EAL domain MSIP34_RS12275 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS12275 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS12300 PF13091 PLD-like domain MSIP34_RS12305 PF03372 Endonuclease/Exonuclease/phosphatase family MSIP34_RS12310 PF02445 Quinolinate synthetase A protein MSIP34_RS12315 PF00293 NUDIX domain MSIP34_RS12320 PF00156 Phosphoribosyl transferase domain MSIP34_RS12330 PF02938 GAD domain MSIP34_RS12330 PF00152 tRNA synthetases class II (D, K and N) MSIP34_RS12330 PF01336 OB-fold nucleic acid binding domain MSIP34_RS12345 PF01012 Electron transfer flavoprotein domain MSIP34_RS12345 PF00766 Electron transfer flavoprotein FAD-binding domain MSIP34_RS12350 PF01012 Electron transfer flavoprotein domain MSIP34_RS12360 PF02665 Nitrate reductase gamma subunit MSIP34_RS12360 PF02754 Cysteine-rich domain MSIP34_RS12360 PF13183 4Fe-4S dicluster domain MSIP34_RS12365 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS12365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MSIP34_RS12385 PF00072 Response regulator receiver domain MSIP34_RS12385 PF00196 Bacterial regulatory proteins, luxR family MSIP34_RS12390 PF07730 Histidine kinase MSIP34_RS12390 PF00672 HAMP domain MSIP34_RS12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS12390 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term MSIP34_RS12410 PF00970 Oxidoreductase FAD-binding domain MSIP34_RS12410 PF00111 2Fe-2S iron-sulfur cluster binding domain MSIP34_RS12410 PF00175 Oxidoreductase NAD-binding domain MSIP34_RS12420 PF01571 Aminomethyltransferase folate-binding domain MSIP34_RS12420 PF08669 Glycine cleavage T-protein C-terminal barrel domain MSIP34_RS12425 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS12425 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS12425 PF00563 EAL domain MSIP34_RS12430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS12430 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS12435 PF00072 Response regulator receiver domain MSIP34_RS12435 PF00486 Transcriptional regulatory protein, C terminal MSIP34_RS12460 PF03466 LysR substrate binding domain MSIP34_RS12460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS12470 PF07859 alpha/beta hydrolase fold MSIP34_RS12475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS12475 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS12480 PF00873 AcrB/AcrD/AcrF family MSIP34_RS12485 PF02321 Outer membrane efflux protein MSIP34_RS12490 PF06445 GyrI-like small molecule binding domain MSIP34_RS12500 PF00436 Single-strand binding protein family MSIP34_RS12505 PF07690 Major Facilitator Superfamily MSIP34_RS12510 PF17760 UvrA interaction domain MSIP34_RS12510 PF17755 UvrA DNA-binding domain MSIP34_RS12520 PF00912 Transglycosylase MSIP34_RS12525 PF01488 Shikimate / quinate 5-dehydrogenase MSIP34_RS12525 PF08501 Shikimate dehydrogenase substrate binding domain MSIP34_RS12525 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MSIP34_RS12535 PF03951 Glutamine synthetase, beta-Grasp domain MSIP34_RS12535 PF00120 Glutamine synthetase, catalytic domain MSIP34_RS12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS12545 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS12545 PF00989 PAS fold MSIP34_RS12550 PF00072 Response regulator receiver domain MSIP34_RS12550 PF00158 Sigma-54 interaction domain MSIP34_RS12550 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS12570 PF01966 HD domain MSIP34_RS12570 PF13286 Phosphohydrolase-associated domain MSIP34_RS12575 PF01761 3-dehydroquinate synthase MSIP34_RS12580 PF01202 Shikimate kinase MSIP34_RS12585 PF00263 Bacterial type II and III secretion system protein MSIP34_RS12585 PF07660 Secretin and TonB N terminus short domain MSIP34_RS12585 PF03958 Bacterial type II/III secretion system short domain MSIP34_RS12585 PF11741 AMIN domain MSIP34_RS12605 PF11104 Type IV pilus assembly protein PilM; MSIP34_RS12610 PF17092 Penicillin-binding protein OB-like domain MSIP34_RS12610 PF00912 Transglycosylase MSIP34_RS12610 PF00905 Penicillin binding protein transpeptidase domain MSIP34_RS12620 PF00490 Delta-aminolevulinic acid dehydratase MSIP34_RS12625 PF00218 Indole-3-glycerol phosphate synthase MSIP34_RS12635 PF00591 Glycosyl transferase family, a/b domain MSIP34_RS12635 PF02885 Glycosyl transferase family, helical bundle domain MSIP34_RS12640 PF00117 Glutamine amidotransferase class-I MSIP34_RS12645 PF00425 chorismate binding enzyme MSIP34_RS12645 PF04715 Anthranilate synthase component I, N terminal region MSIP34_RS12650 PF13419 Haloacid dehalogenase-like hydrolase MSIP34_RS12655 PF00834 Ribulose-phosphate 3 epimerase family MSIP34_RS12660 PF01488 Shikimate / quinate 5-dehydrogenase MSIP34_RS12660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MSIP34_RS12660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MSIP34_RS12665 PF03462 PCRF domain MSIP34_RS12665 PF00472 RF-1 domain MSIP34_RS12675 PF17827 PrmC N-terminal domain MSIP34_RS12675 PF05175 Methyltransferase small domain MSIP34_RS12685 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS12690 PF00561 alpha/beta hydrolase fold MSIP34_RS12695 PF00561 alpha/beta hydrolase fold MSIP34_RS12695 PF07021 Methionine biosynthesis protein MetW MSIP34_RS12705 PF07690 Major Facilitator Superfamily MSIP34_RS12715 PF00156 Phosphoribosyl transferase domain MSIP34_RS12725 PF02637 GatB domain MSIP34_RS12725 PF02934 GatB/GatE catalytic domain MSIP34_RS12730 PF01425 Amidase MSIP34_RS12735 PF02686 Glu-tRNAGln amidotransferase C subunit MSIP34_RS12750 PF04093 rod shape-determining protein MreD MSIP34_RS12755 PF03717 Penicillin-binding Protein dimerisation domain MSIP34_RS12755 PF00905 Penicillin binding protein transpeptidase domain MSIP34_RS12760 PF01098 Cell cycle protein MSIP34_RS12765 PF03330 Lytic transglycolase MSIP34_RS12765 PF05036 Sporulation related domain MSIP34_RS12770 PF07943 Penicillin-binding protein 5, C-terminal domain MSIP34_RS12770 PF00768 D-alanyl-D-alanine carboxypeptidase MSIP34_RS12775 PF01063 Amino-transferase class IV MSIP34_RS12780 PF04359 Protein of unknown function (DUF493) MSIP34_RS12785 PF03099 Biotin/lipoate A/B protein ligase family MSIP34_RS12790 PF04055 Radical SAM superfamily MSIP34_RS12790 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MSIP34_RS12805 PF13360 PQQ-like domain MSIP34_RS12830 PF17827 PrmC N-terminal domain MSIP34_RS12830 PF05175 Methyltransferase small domain MSIP34_RS12855 PF00034 Cytochrome c MSIP34_RS12865 PF00115 Cytochrome C and Quinol oxidase polypeptide I MSIP34_RS12875 PF00128 Alpha amylase, catalytic domain MSIP34_RS12875 PF11896 Domain of unknown function (DUF3416) MSIP34_RS12885 PF00128 Alpha amylase, catalytic domain MSIP34_RS12885 PF11941 Domain of unknown function (DUF3459) MSIP34_RS12890 PF00128 Alpha amylase, catalytic domain MSIP34_RS12910 PF01814 Hemerythrin HHE cation binding domain MSIP34_RS12915 PF02735 Ku70/Ku80 beta-barrel domain MSIP34_RS12920 PF13298 DNA polymerase Ligase (LigD) MSIP34_RS12920 PF04679 ATP dependent DNA ligase C terminal region MSIP34_RS12920 PF01068 ATP dependent DNA ligase domain MSIP34_RS12960 PF01225 Mur ligase family, catalytic domain MSIP34_RS12960 PF08245 Mur ligase middle domain MSIP34_RS12960 PF02875 Mur ligase family, glutamate ligase domain MSIP34_RS12965 PF08668 HDOD domain MSIP34_RS12965 PF00563 EAL domain MSIP34_RS12970 PF02310 B12 binding domain MSIP34_RS12970 PF02607 B12 binding domain MSIP34_RS12970 PF02965 Vitamin B12 dependent methionine synthase, activation domain MSIP34_RS12970 PF02574 Homocysteine S-methyltransferase MSIP34_RS12970 PF00809 Pterin binding enzyme MSIP34_RS12980 PF13335 Magnesium chelatase, subunit ChlI C-terminal MSIP34_RS12980 PF01078 Magnesium chelatase, subunit ChlI MSIP34_RS12985 PF04380 Membrane fusogenic activity MSIP34_RS12995 PF00543 Nitrogen regulatory protein P-II MSIP34_RS13000 PF00909 Ammonium Transporter Family MSIP34_RS13010 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MSIP34_RS13010 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MSIP34_RS13015 PF05567 Neisseria PilC beta-propeller domain MSIP34_RS13035 PF00114 Pilin (bacterial filament) MSIP34_RS13035 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS13040 PF00114 Pilin (bacterial filament) MSIP34_RS13040 PF07963 Prokaryotic N-terminal methylation motif MSIP34_RS13045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MSIP34_RS13045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MSIP34_RS13050 PF01842 ACT domain MSIP34_RS13050 PF00551 Formyl transferase MSIP34_RS13060 PF17113 Regulatory signalling modulator protein AmpE MSIP34_RS13060 PF03186 CobD/Cbib protein MSIP34_RS13065 PF02401 LytB protein MSIP34_RS13080 PF13673 Acetyltransferase (GNAT) domain MSIP34_RS13095 PF00916 Sulfate permease family MSIP34_RS13095 PF01740 STAS domain MSIP34_RS13100 PF14815 NUDIX domain MSIP34_RS13100 PF10576 Iron-sulfur binding domain of endonuclease III MSIP34_RS13100 PF00730 HhH-GPD superfamily base excision DNA repair protein MSIP34_RS13100 PF00633 Helix-hairpin-helix motif MSIP34_RS13110 PF06055 Exopolysaccharide synthesis, ExoD MSIP34_RS13115 PF02673 Bacitracin resistance protein BacA MSIP34_RS13125 PF01479 S4 domain MSIP34_RS13125 PF00849 RNA pseudouridylate synthase MSIP34_RS13130 PF01964 Radical SAM ThiC family MSIP34_RS13130 PF13667 ThiC-associated domain MSIP34_RS13140 PF00106 short chain dehydrogenase MSIP34_RS13150 PF00501 AMP-binding enzyme MSIP34_RS13170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS13170 PF00512 His Kinase A (phospho-acceptor) domain MSIP34_RS13175 PF02954 Bacterial regulatory protein, Fis family MSIP34_RS13175 PF00072 Response regulator receiver domain MSIP34_RS13175 PF00158 Sigma-54 interaction domain MSIP34_RS13185 PF02321 Outer membrane efflux protein MSIP34_RS13215 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MSIP34_RS13220 PF00317 Ribonucleotide reductase, all-alpha domain MSIP34_RS13220 PF02867 Ribonucleotide reductase, barrel domain MSIP34_RS13220 PF03477 ATP cone domain MSIP34_RS13230 PF01734 Patatin-like phospholipase MSIP34_RS13245 PF00528 Binding-protein-dependent transport system inner membrane component MSIP34_RS13255 PF00005 ABC transporter MSIP34_RS13260 PF00392 Bacterial regulatory proteins, gntR family MSIP34_RS13260 PF07702 UTRA domain MSIP34_RS13265 PF02311 AraC-like ligand binding domain MSIP34_RS13265 PF12833 Helix-turn-helix domain MSIP34_RS13285 PF12833 Helix-turn-helix domain MSIP34_RS13295 PF03466 LysR substrate binding domain MSIP34_RS13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS13300 PF00561 alpha/beta hydrolase fold MSIP34_RS13310 PF00313 'Cold-shock' DNA-binding domain MSIP34_RS13315 PF04972 BON domain MSIP34_RS13325 PF05957 Bacterial protein of unknown function (DUF883) MSIP34_RS13350 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13350 PF00563 EAL domain MSIP34_RS13350 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS13360 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain MSIP34_RS13360 PF10091 Putative glucoamylase MSIP34_RS13360 PF06165 Glycosyltransferase family 36 MSIP34_RS13370 PF04954 Siderophore-interacting protein MSIP34_RS13370 PF08021 Siderophore-interacting FAD-binding domain MSIP34_RS13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS13375 PF08447 PAS fold MSIP34_RS13375 PF13426 PAS domain MSIP34_RS13380 PF02525 Flavodoxin-like fold MSIP34_RS13385 PF00392 Bacterial regulatory proteins, gntR family MSIP34_RS13385 PF00155 Aminotransferase class I and II MSIP34_RS13390 PF02321 Outer membrane efflux protein MSIP34_RS13395 PF00873 AcrB/AcrD/AcrF family MSIP34_RS13400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS13400 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS13410 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13415 PF10442 FIST C domain MSIP34_RS13415 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13415 PF08495 FIST N domain MSIP34_RS13415 PF00563 EAL domain MSIP34_RS13420 PF00199 Catalase MSIP34_RS13425 PF01047 MarR family MSIP34_RS13435 PF03466 LysR substrate binding domain MSIP34_RS13435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS13440 PF17954 Quercetinase C-terminal cupin domain MSIP34_RS13440 PF02678 Pirin MSIP34_RS13445 PF05368 NmrA-like family MSIP34_RS13450 PF00857 Isochorismatase family MSIP34_RS13455 PF07969 Amidohydrolase family MSIP34_RS13460 PF07690 Major Facilitator Superfamily MSIP34_RS13490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS13490 PF03466 LysR substrate binding domain MSIP34_RS13495 PF14760 Rnk N-terminus MSIP34_RS13495 PF01272 Transcription elongation factor, GreA/GreB, C-term MSIP34_RS13500 PF17863 AAA lid domain MSIP34_RS13500 PF07726 ATPase family associated with various cellular activities (AAA) MSIP34_RS13530 PF00107 Zinc-binding dehydrogenase MSIP34_RS13530 PF08240 Alcohol dehydrogenase GroES-like domain MSIP34_RS13535 PF03466 LysR substrate binding domain MSIP34_RS13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS13545 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13545 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS13545 PF00563 EAL domain MSIP34_RS13550 PF01339 CheB methylesterase MSIP34_RS13550 PF00072 Response regulator receiver domain MSIP34_RS13555 PF03975 CheD chemotactic sensory transduction MSIP34_RS13560 PF01739 CheR methyltransferase, SAM binding domain MSIP34_RS13560 PF03705 CheR methyltransferase, all-alpha domain MSIP34_RS13565 PF01584 CheW-like domain MSIP34_RS13570 PF02203 Tar ligand binding domain homologue MSIP34_RS13570 PF00672 HAMP domain MSIP34_RS13570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS13575 PF01584 CheW-like domain MSIP34_RS13580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS13580 PF02203 Tar ligand binding domain homologue MSIP34_RS13580 PF00672 HAMP domain MSIP34_RS13590 PF01584 CheW-like domain MSIP34_RS13595 PF02203 Tar ligand binding domain homologue MSIP34_RS13595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS13595 PF00672 HAMP domain MSIP34_RS13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MSIP34_RS13600 PF01627 Hpt domain MSIP34_RS13600 PF09078 CheY binding MSIP34_RS13600 PF01584 CheW-like domain MSIP34_RS13600 PF02895 Signal transducing histidine kinase, homodimeric domain MSIP34_RS13610 PF00072 Response regulator receiver domain MSIP34_RS13615 PF02203 Tar ligand binding domain homologue MSIP34_RS13615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MSIP34_RS13615 PF00672 HAMP domain MSIP34_RS13620 PF02321 Outer membrane efflux protein MSIP34_RS13625 PF00873 AcrB/AcrD/AcrF family MSIP34_RS13630 PF00529 HlyD membrane-fusion protein of T1SS MSIP34_RS13630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MSIP34_RS13635 PF08361 MAATS-type transcriptional repressor, C-terminal region MSIP34_RS13635 PF00440 Bacterial regulatory proteins, tetR family MSIP34_RS13640 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13640 PF00563 EAL domain MSIP34_RS13640 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS13665 PF12833 Helix-turn-helix domain MSIP34_RS13665 PF01965 DJ-1/PfpI family MSIP34_RS13670 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13670 PF01590 GAF domain MSIP34_RS13670 PF00360 Phytochrome region MSIP34_RS13670 PF00563 EAL domain MSIP34_RS13675 PF01863 Protein of unknown function DUF45 MSIP34_RS13680 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS13680 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13680 PF00563 EAL domain MSIP34_RS13690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MSIP34_RS13690 PF03466 LysR substrate binding domain MSIP34_RS13710 PF02308 MgtC family MSIP34_RS13715 PF00012 Hsp70 protein MSIP34_RS13720 PF04381 Putative exonuclease, RdgC MSIP34_RS13735 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MSIP34_RS13745 PF01595 Cyclin M transmembrane N-terminal domain MSIP34_RS13745 PF00571 CBS domain MSIP34_RS13745 PF03471 Transporter associated domain MSIP34_RS13750 PF00313 'Cold-shock' DNA-binding domain MSIP34_RS13755 PF01176 Translation initiation factor 1A / IF-1 MSIP34_RS13780 PF00873 AcrB/AcrD/AcrF family MSIP34_RS13805 PF07715 TonB-dependent Receptor Plug Domain MSIP34_RS13805 PF00593 TonB dependent receptor MSIP34_RS13805 PF07660 Secretin and TonB N terminus short domain MSIP34_RS13820 PF00216 Bacterial DNA-binding protein MSIP34_RS13830 PF00999 Sodium/hydrogen exchanger family MSIP34_RS13830 PF02254 TrkA-N domain MSIP34_RS13850 PF00862 Sucrose synthase MSIP34_RS13850 PF00534 Glycosyl transferases group 1 MSIP34_RS13855 PF00128 Alpha amylase, catalytic domain MSIP34_RS13860 PF00924 Mechanosensitive ion channel MSIP34_RS13870 PF07690 Major Facilitator Superfamily MSIP34_RS13875 PF03707 Bacterial signalling protein N terminal repeat MSIP34_RS13875 PF00563 EAL domain MSIP34_RS13875 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13885 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS13900 PF13193 AMP-binding enzyme C-terminal domain MSIP34_RS13900 PF01553 Acyltransferase MSIP34_RS13900 PF00501 AMP-binding enzyme MSIP34_RS13905 PF07690 Major Facilitator Superfamily MSIP34_RS13915 PF08548 Peptidase M10 serralysin C terminal MSIP34_RS13915 PF00413 Matrixin MSIP34_RS13915 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) MSIP34_RS13920 PF07681 DoxX MSIP34_RS13925 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MSIP34_RS13930 PF06725 3D domain MSIP34_RS13930 PF03562 MltA specific insert domain MSIP34_RS13935 PF04379 ApaG domain MSIP34_RS13940 PF05690 Thiazole biosynthesis protein ThiG MSIP34_RS13945 PF02597 ThiS family MSIP34_RS13945 PF05690 Thiazole biosynthesis protein ThiG MSIP34_RS13955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MSIP34_RS13965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MSIP34_RS13965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MSIP34_RS13985 PF00355 Rieske [2Fe-2S] domain MSIP34_RS13985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) MSIP34_RS14030 PF00301 Rubredoxin MSIP34_RS14035 PF08543 Phosphomethylpyrimidine kinase MSIP34_RS14040 PF02581 Thiamine monophosphate synthase MSIP34_RS14045 PF00202 Aminotransferase class-III MSIP34_RS14050 PF00310 Glutamine amidotransferases class-II MSIP34_RS14050 PF04898 Glutamate synthase central domain MSIP34_RS14050 PF01645 Conserved region in glutamate synthase MSIP34_RS14050 PF01493 GXGXG motif MSIP34_RS14055 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MSIP34_RS14055 PF07992 Pyridine nucleotide-disulphide oxidoreductase MSIP34_RS14060 PF01208 Uroporphyrinogen decarboxylase (URO-D) MSIP34_RS14065 PF18074 Primosomal protein N C-terminal domain MSIP34_RS14065 PF17764 3′ DNA-binding domain (3′BD) MSIP34_RS14065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MSIP34_RS14065 PF00271 Helicase conserved C-terminal domain MSIP34_RS14065 PF00270 DEAD/DEAH box helicase MSIP34_RS14070 PF00750 tRNA synthetases class I (R) MSIP34_RS14070 PF05746 DALR anticodon binding domain MSIP34_RS14070 PF03485 Arginyl tRNA synthetase N terminal domain MSIP34_RS14080 PF01323 DSBA-like thioredoxin domain MSIP34_RS14090 PF00990 Diguanylate cyclase, GGDEF domain MSIP34_RS14090 PF00360 Phytochrome region MSIP34_RS14090 PF01590 GAF domain MSIP34_RS14090 PF00563 EAL domain MSIP34_RS14095 PF01380 SIS domain MSIP34_RS14100 PF00132 Bacterial transferase hexapeptide (six repeats) MSIP34_RS14100 PF12804 MobA-like NTP transferase domain MSIP34_RS14105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MSIP34_RS14105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MSIP34_RS14110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MSIP34_RS14110 PF02874 ATP synthase alpha/beta family, beta-barrel domain MSIP34_RS14115 PF00231 ATP synthase MSIP34_RS14120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MSIP34_RS14120 PF02874 ATP synthase alpha/beta family, beta-barrel domain MSIP34_RS14120 PF00306 ATP synthase alpha/beta chain, C terminal domain MSIP34_RS14125 PF00213 ATP synthase delta (OSCP) subunit MSIP34_RS14130 PF00430 ATP synthase B/B' CF(0) MSIP34_RS14140 PF00119 ATP synthase A chain MSIP34_RS14150 PF17762 HTH domain found in ParB protein MSIP34_RS14150 PF02195 ParB-like nuclease domain MSIP34_RS14155 PF13614 AAA domain MSIP34_RS14160 PF02527 rRNA small subunit methyltransferase G MSIP34_RS14165 PF01134 Glucose inhibited division protein A MSIP34_RS14165 PF13932 GidA associated domain MSIP34_RS14170 PF01926 50S ribosome-binding GTPase MSIP34_RS14170 PF12631 MnmE helical domain MSIP34_RS14170 PF10396 GTP-binding protein TrmE N-terminus MSIP34_RS14175 PF02096 60Kd inner membrane protein MSIP34_RS14175 PF14849 YidC periplasmic domain MSIP34_RS14180 PF00825 Ribonuclease P MSIP34_RS14245 PF06039 Malate:quinone oxidoreductase (Mqo) MSIP34_RS14455 PF03725 3' exoribonuclease family, domain 2 MSIP34_RS14455 PF01138 3' exoribonuclease family, domain 1 MSIP34_RS14580 PF16360 GTP-binding GTPase Middle Region MSIP34_RS14580 PF01926 50S ribosome-binding GTPase MSIP34_RS14580 PF13167 GTP-binding GTPase N-terminal MSIP34_RS14680 PF00004 ATPase family associated with various cellular activities (AAA) MSIP34_RS14680 PF05362 Lon protease (S16) C-terminal proteolytic domain MSIP34_RS14680 PF02190 ATP-dependent protease La (LON) substrate-binding domain MSIP34_RS14690 PF18818 Metallopeptidase superfamily domain MSIP34_RS14690 PF13362 Toprim domain MSIP34_RS14690 PF08401 Domain of unknown function (DUF1738) MSIP34_RS14700 PF00589 Phage integrase family MSIP34_RS14700 PF02899 Phage integrase, N-terminal SAM-like domain MSIP34_RS14705 PF00128 Alpha amylase, catalytic domain MSIP34_RS14705 PF16657 Maltogenic Amylase, C-terminal domain MSIP34_RS14765 PF00380 Ribosomal protein S9/S16