MSIP34_RS00005 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain MSIP34_RS00010 SM00480 DNA polymerase III beta subunit MSIP34_RS00015 SM00387 Histidine kinase-like ATPases MSIP34_RS00015 SM00433 TopoisomeraseII MSIP34_RS00025 SM00090 RIO-like kinase MSIP34_RS00065 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS00065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MSIP34_RS00065 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS00065 SM00091 PAS domain MSIP34_RS00065 SM00267 diguanylate cyclase MSIP34_RS00075 SM00564 beta-propeller repeat MSIP34_RS00080 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00115 SM00878 Biotin carboxylase C-terminal domain MSIP34_RS00175 SM00448 cheY-homologous receiver domain MSIP34_RS00175 SM00850 LytTr DNA-binding domain MSIP34_RS00220 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS00240 SM00331 Sigma factor PP2C-like phosphatases MSIP34_RS00240 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MSIP34_RS00245 SM00220 Serine/Threonine protein kinases, catalytic domain MSIP34_RS00255 SM00072 Guanylate kinase homologues. MSIP34_RS00260 SM01409 MSIP34_RS00260 MSIP34_RS00265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MSIP34_RS00265 SM00954 Region found in RelA / SpoT proteins MSIP34_RS00275 SM00487 DEAD-like helicases superfamily MSIP34_RS00275 SM00490 helicase superfamily c-terminal domain MSIP34_RS00300 SM00859 Semialdehyde dehydrogenase, NAD binding domain MSIP34_RS00335 SM00363 S4 RNA-binding domain MSIP34_RS00370 SM00316 Ribosomal protein S1-like RNA-binding domain MSIP34_RS00390 SM01387 MSIP34_RS00390 MSIP34_RS00395 SM00316 Ribosomal protein S1-like RNA-binding domain MSIP34_RS00395 SM00322 K homology RNA-binding domain MSIP34_RS00430 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00430 SM00448 cheY-homologous receiver domain MSIP34_RS00440 SM00965 Secretin and TonB N terminus short domain MSIP34_RS00445 SM00028 Tetratricopeptide repeats MSIP34_RS00495 SM00244 prohibitin homologues MSIP34_RS00520 SM00450 Rhodanese Homology Domain MSIP34_RS00530 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00535 SM01007 Class II Aldolase and Adducin N-terminal domain MSIP34_RS00550 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00620 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00625 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MSIP34_RS00660 SM00091 PAS domain MSIP34_RS00660 SM00267 diguanylate cyclase MSIP34_RS00710 SM00858 MSIP34_RS00710 MSIP34_RS00715 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS00735 SM00855 Phosphoglycerate mutase family MSIP34_RS00740 SM00028 Tetratricopeptide repeats MSIP34_RS00745 SM00028 Tetratricopeptide repeats MSIP34_RS00860 SM00320 WD40 repeats MSIP34_RS00940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MSIP34_RS00945 SM00996 S-adenosyl-L-homocysteine hydrolase MSIP34_RS00945 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MSIP34_RS00970 SM00257 Lysin motif MSIP34_RS01000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS01000 SM00387 Histidine kinase-like ATPases MSIP34_RS01000 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS01005 SM00448 cheY-homologous receiver domain MSIP34_RS01070 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS01105 SM00935 Outer membrane protein (OmpH-like) MSIP34_RS01195 SM00644 MSIP34_RS01195 MSIP34_RS01205 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS01205 SM00448 cheY-homologous receiver domain MSIP34_RS01210 SM00387 Histidine kinase-like ATPases MSIP34_RS01210 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS01275 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain MSIP34_RS01275 SM00437 Bacterial DNA topoisomerase I DNA-binding domain MSIP34_RS01275 SM00493 MSIP34_RS01275 MSIP34_RS01320 SM00387 Histidine kinase-like ATPases MSIP34_RS01330 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS01355 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS01395 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MSIP34_RS01450 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MSIP34_RS01520 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. MSIP34_RS01520 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MSIP34_RS01525 SM00649 Ribosomal protein L11/L12 MSIP34_RS01550 SM00663 RNA polymerase I subunit A N-terminus MSIP34_RS01565 SM00838 Elongation factor G C-terminus MSIP34_RS01565 SM00889 Elongation factor G, domain IV MSIP34_RS01575 SM01403 MSIP34_RS01575 MSIP34_RS01595 SM01382 MSIP34_RS01595 MSIP34_RS01595 SM01383 MSIP34_RS01595 MSIP34_RS01610 SM00322 K homology RNA-binding domain MSIP34_RS01630 SM01374 MSIP34_RS01630 MSIP34_RS01635 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MSIP34_RS01700 SM00363 S4 RNA-binding domain MSIP34_RS01700 SM01390 MSIP34_RS01700 MSIP34_RS01705 SM00662 RNA polymerases D MSIP34_RS01720 SM00924 MgtE intracellular N domain MSIP34_RS01765 SM00460 Transglutaminase/protease-like homologues MSIP34_RS01775 SM00460 Transglutaminase/protease-like homologues MSIP34_RS01785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MSIP34_RS01795 SM00220 Serine/Threonine protein kinases, catalytic domain MSIP34_RS01795 SM00331 Sigma factor PP2C-like phosphatases MSIP34_RS01795 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MSIP34_RS01825 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS01840 SM01012 MSIP34_RS01840 MSIP34_RS01850 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS01905 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS01905 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS01905 SM00091 PAS domain MSIP34_RS01905 SM00267 diguanylate cyclase MSIP34_RS01950 SM01209 MSIP34_RS01950 MSIP34_RS01950 SM01210 MSIP34_RS01950 MSIP34_RS01955 SM00798 AICARFT/IMPCHase bienzyme MSIP34_RS01955 SM00851 MGS-like domain MSIP34_RS01980 SM00852 Probable molybdopterin binding domain MSIP34_RS01990 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs MSIP34_RS01990 SM00474 3'-5' exonuclease MSIP34_RS01990 SM00475 5'-3' exonuclease MSIP34_RS01990 SM00482 DNA polymerase A domain MSIP34_RS02025 SM00267 diguanylate cyclase MSIP34_RS02035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS02035 SM00387 Histidine kinase-like ATPases MSIP34_RS02035 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS02040 SM00448 cheY-homologous receiver domain MSIP34_RS02040 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS02065 SM00883 Chaperonin 10 Kd subunit MSIP34_RS02070 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS02080 SM00488 MSIP34_RS02080 MSIP34_RS02080 SM00491 MSIP34_RS02080 MSIP34_RS02095 SM00345 helix_turn_helix gluconate operon transcriptional repressor MSIP34_RS02115 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS02115 SM00091 PAS domain MSIP34_RS02115 SM00267 diguanylate cyclase MSIP34_RS02115 SM00448 cheY-homologous receiver domain MSIP34_RS02120 SM00387 Histidine kinase-like ATPases MSIP34_RS02120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MSIP34_RS02125 SM00965 Secretin and TonB N terminus short domain MSIP34_RS02155 SM00965 Secretin and TonB N terminus short domain MSIP34_RS02185 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS02240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MSIP34_RS02240 SM00245 tail specific protease MSIP34_RS02250 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS02280 SM00460 Transglutaminase/protease-like homologues MSIP34_RS02370 SM00842 Cell division protein FtsA MSIP34_RS02375 SM00864 Tubulin/FtsZ family, GTPase domain MSIP34_RS02375 SM00865 Tubulin/FtsZ family, C-terminal domain MSIP34_RS02435 SM00530 Helix-turn-helix XRE-family like proteins MSIP34_RS02455 SM00267 diguanylate cyclase MSIP34_RS02460 SM00861 Transketolase, pyrimidine binding domain MSIP34_RS02465 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MSIP34_RS02495 SM00947 Carbonic anhydrase MSIP34_RS02505 SM00986 Uracil DNA glycosylase superfamily MSIP34_RS02505 SM00987 UreE urease accessory protein, C-terminal domain MSIP34_RS02515 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS02535 SM00957 SecA DEAD-like domain MSIP34_RS02535 SM00958 SecA preprotein cross-linking domain MSIP34_RS02560 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS02625 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase MSIP34_RS02630 SM01001 AIR carboxylase MSIP34_RS02650 SM00904 Riboflavin kinase MSIP34_RS02680 SM00829 Enoylreductase MSIP34_RS02695 SM01060 MSIP34_RS02695 MSIP34_RS02720 SM00448 cheY-homologous receiver domain MSIP34_RS02725 SM00387 Histidine kinase-like ATPases MSIP34_RS02725 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS02750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MSIP34_RS02755 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS02755 SM00091 PAS domain MSIP34_RS02755 SM00267 diguanylate cyclase MSIP34_RS02760 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS02760 SM01086 C-terminal, D2-small domain, of ClpB protein MSIP34_RS02775 SM00671 Sel1-like repeats. MSIP34_RS02810 SM00450 Rhodanese Homology Domain MSIP34_RS02850 SM00947 Carbonic anhydrase MSIP34_RS02870 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS02870 SM00876 Biotin and Thiamin Synthesis associated domain MSIP34_RS02930 SM00650 Ribosomal RNA adenine dimethylases MSIP34_RS02960 SM01011 Aminopeptidase P, N-terminal domain MSIP34_RS02990 SM00357 Cold shock protein domain MSIP34_RS02995 SM01329 MSIP34_RS02995 MSIP34_RS03030 SM00861 Transketolase, pyrimidine binding domain MSIP34_RS03055 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS03070 SM00135 Low-density lipoprotein-receptor YWTD domain MSIP34_RS03100 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03140 SM00316 Ribosomal protein S1-like RNA-binding domain MSIP34_RS03160 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03165 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03190 SM00732 Likely ribonuclease with RNase H fold. MSIP34_RS03215 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03220 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS03225 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MSIP34_RS03240 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03290 SM00642 Alpha-amylase domain MSIP34_RS03320 SM00903 Flavin reductase like domain MSIP34_RS03375 SM00419 helix_turn_helix, cAMP Regulatory protein MSIP34_RS03390 SM01118 MSIP34_RS03390 MSIP34_RS03400 SM00855 Phosphoglycerate mutase family MSIP34_RS03455 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MSIP34_RS03460 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MSIP34_RS03530 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. MSIP34_RS03565 SM00834 Putative regulatory protein MSIP34_RS03590 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03615 SM00988 UreE urease accessory protein, N-terminal domain MSIP34_RS03635 SM00387 Histidine kinase-like ATPases MSIP34_RS03635 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS03635 SM00448 cheY-homologous receiver domain MSIP34_RS03640 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS03640 SM00448 cheY-homologous receiver domain MSIP34_RS03645 SM00220 Serine/Threonine protein kinases, catalytic domain MSIP34_RS03665 SM00478 endonuclease III MSIP34_RS03670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MSIP34_RS03695 SM00873 B3/4 domain MSIP34_RS03695 SM00874 tRNA synthetase B5 domain MSIP34_RS03695 SM00896 Ferredoxin-fold anticodon binding domain MSIP34_RS03700 SM00411 bacterial (prokaryotic) histone like domain MSIP34_RS03705 SM00422 helix_turn_helix, mercury resistance MSIP34_RS03720 SM00490 helicase superfamily c-terminal domain MSIP34_RS03735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS03735 SM00387 Histidine kinase-like ATPases MSIP34_RS03740 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS03740 SM00448 cheY-homologous receiver domain MSIP34_RS03745 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS03745 SM00448 cheY-homologous receiver domain MSIP34_RS03750 SM00387 Histidine kinase-like ATPases MSIP34_RS03755 SM00564 beta-propeller repeat MSIP34_RS03760 SM00062 Bacterial periplasmic substrate-binding proteins MSIP34_RS03775 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03790 SM00327 von Willebrand factor (vWF) type A domain MSIP34_RS03810 SM00387 Histidine kinase-like ATPases MSIP34_RS03815 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS03815 SM00448 cheY-homologous receiver domain MSIP34_RS03880 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS03940 SM00047 Lysozyme subfamily 2 MSIP34_RS03985 SM00858 MSIP34_RS03985 MSIP34_RS04030 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS04030 SM00962 SRP54-type protein, GTPase domain MSIP34_RS04060 SM00965 Secretin and TonB N terminus short domain MSIP34_RS04085 SM00965 Secretin and TonB N terminus short domain MSIP34_RS04100 SM00965 Secretin and TonB N terminus short domain MSIP34_RS04135 SM00448 cheY-homologous receiver domain MSIP34_RS04140 SM00073 Histidine Phosphotransfer domain MSIP34_RS04140 SM00260 Two component signalling adaptor domain MSIP34_RS04140 SM00387 Histidine kinase-like ATPases MSIP34_RS04140 SM01231 MSIP34_RS04140 MSIP34_RS04145 SM00260 Two component signalling adaptor domain MSIP34_RS04150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS04160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS04165 SM00138 Methyltransferase, chemotaxis proteins MSIP34_RS04175 SM00448 cheY-homologous receiver domain MSIP34_RS04180 SM00448 cheY-homologous receiver domain MSIP34_RS04205 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS04230 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS04270 SM00028 Tetratricopeptide repeats MSIP34_RS04290 SM00965 Secretin and TonB N terminus short domain MSIP34_RS04355 SM00869 Autotransporter beta-domain MSIP34_RS04365 SM01007 Class II Aldolase and Adducin N-terminal domain MSIP34_RS04385 SM01192 MSIP34_RS04385 MSIP34_RS04385 SM01193 MSIP34_RS04385 MSIP34_RS04395 SM00267 diguanylate cyclase MSIP34_RS04415 SM00327 von Willebrand factor (vWF) type A domain MSIP34_RS04425 SM00327 von Willebrand factor (vWF) type A domain MSIP34_RS04440 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS04450 SM00825 Beta-ketoacyl synthase MSIP34_RS04495 SM00749 bacterial OsmY and nodulation domain MSIP34_RS04500 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS04500 SM00448 cheY-homologous receiver domain MSIP34_RS04510 SM00387 Histidine kinase-like ATPases MSIP34_RS04510 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS04520 SM00028 Tetratricopeptide repeats MSIP34_RS04530 SM00833 Cobalamin synthesis protein cobW C-terminal domain MSIP34_RS04535 SM00833 Cobalamin synthesis protein cobW C-terminal domain MSIP34_RS04550 SM00955 MSIP34_RS04550 MSIP34_RS04560 SM00981 MSIP34_RS04560 MSIP34_RS04575 SM01211 MSIP34_RS04575 MSIP34_RS04580 SM00248 ankyrin repeats MSIP34_RS04620 SM00881 CoA binding domain MSIP34_RS04625 SM00248 ankyrin repeats MSIP34_RS04635 SM00938 Nitrogen regulatory protein P-II MSIP34_RS04650 SM00899 MSIP34_RS04650 MSIP34_RS04655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MSIP34_RS04680 SM00481 DNA polymerase alpha chain like domain MSIP34_RS04715 SM00363 S4 RNA-binding domain MSIP34_RS04720 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS04720 SM00267 diguanylate cyclase MSIP34_RS04820 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS04830 SM01230 MSIP34_RS04830 MSIP34_RS04850 SM00796 Allophanate hydrolase subunit 1 MSIP34_RS04850 SM00797 Allophanate hydrolase subunit 2 MSIP34_RS04850 SM00878 Biotin carboxylase C-terminal domain MSIP34_RS04885 SM00271 DnaJ molecular chaperone homology domain MSIP34_RS04895 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS04955 SM00460 Transglutaminase/protease-like homologues MSIP34_RS04990 SM00867 YceI-like domain MSIP34_RS05015 SM00257 Lysin motif MSIP34_RS05060 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS05060 SM00091 PAS domain MSIP34_RS05060 SM00267 diguanylate cyclase MSIP34_RS05115 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MSIP34_RS05115 SM00465 GIY-YIG type nucleases (URI domain) MSIP34_RS05145 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS05155 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS05160 SM00327 von Willebrand factor (vWF) type A domain MSIP34_RS05170 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS05170 SM00267 diguanylate cyclase MSIP34_RS05225 SM00098 Alkaline phosphatase homologues MSIP34_RS05350 SM00028 Tetratricopeptide repeats MSIP34_RS05360 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. MSIP34_RS05385 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS05395 SM00448 cheY-homologous receiver domain MSIP34_RS05395 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS05400 SM00387 Histidine kinase-like ATPases MSIP34_RS05400 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS05435 SM00267 diguanylate cyclase MSIP34_RS05445 SM00267 diguanylate cyclase MSIP34_RS05465 SM00900 MSIP34_RS05465 MSIP34_RS05490 SM01359 MSIP34_RS05490 MSIP34_RS05490 SM01360 MSIP34_RS05490 MSIP34_RS05500 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS05500 SM00487 DEAD-like helicases superfamily MSIP34_RS05500 SM00490 helicase superfamily c-terminal domain MSIP34_RS05500 SM00847 Helicase associated domain (HA2) Add an annotation MSIP34_RS05505 SM00347 helix_turn_helix multiple antibiotic resistance protein MSIP34_RS05560 SM00487 DEAD-like helicases superfamily MSIP34_RS05585 SM01350 MSIP34_RS05585 MSIP34_RS05610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MSIP34_RS05615 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MSIP34_RS05630 SM00411 bacterial (prokaryotic) histone like domain MSIP34_RS05635 SM00316 Ribosomal protein S1-like RNA-binding domain MSIP34_RS05670 SM00091 PAS domain MSIP34_RS05670 SM00267 diguanylate cyclase MSIP34_RS05675 SM00267 diguanylate cyclase MSIP34_RS05700 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS05720 SM00448 cheY-homologous receiver domain MSIP34_RS05725 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS05725 SM00448 cheY-homologous receiver domain MSIP34_RS05745 SM00387 Histidine kinase-like ATPases MSIP34_RS05750 SM00749 bacterial OsmY and nodulation domain MSIP34_RS05775 SM00749 bacterial OsmY and nodulation domain MSIP34_RS05790 SM00487 DEAD-like helicases superfamily MSIP34_RS05790 SM00490 helicase superfamily c-terminal domain MSIP34_RS05815 SM01120 MSIP34_RS05815 MSIP34_RS05855 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS05860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MSIP34_RS05870 SM00226 Low molecular weight phosphatase family MSIP34_RS05915 SM00387 Histidine kinase-like ATPases MSIP34_RS05920 SM00448 cheY-homologous receiver domain MSIP34_RS05920 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS05925 SM00869 Autotransporter beta-domain MSIP34_RS05945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS05945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS05965 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS05965 SM00091 PAS domain MSIP34_RS05965 SM00267 diguanylate cyclase MSIP34_RS05980 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS05980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS05980 SM00091 PAS domain MSIP34_RS05980 SM00267 diguanylate cyclase MSIP34_RS06000 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region MSIP34_RS06005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MSIP34_RS06005 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MSIP34_RS06050 SM00463 Small MutS-related domain MSIP34_RS06065 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS06065 SM00843 MSIP34_RS06065 MSIP34_RS06075 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS06090 SM00062 Bacterial periplasmic substrate-binding proteins MSIP34_RS06095 SM00530 Helix-turn-helix XRE-family like proteins MSIP34_RS06115 SM00825 Beta-ketoacyl synthase MSIP34_RS06210 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS06225 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS06245 SM00116 Domain in cystathionine beta-synthase and other proteins. MSIP34_RS06245 SM01240 MSIP34_RS06245 MSIP34_RS06275 SM00260 Two component signalling adaptor domain MSIP34_RS06290 SM00841 Elongation factor P, C-terminal MSIP34_RS06290 SM01185 MSIP34_RS06290 MSIP34_RS06330 SM00487 DEAD-like helicases superfamily MSIP34_RS06330 SM00490 helicase superfamily c-terminal domain MSIP34_RS06330 SM00982 MSIP34_RS06330 MSIP34_RS06330 SM01058 CarD-like/TRCF domain MSIP34_RS06360 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS06370 SM00054 EF-hand, calcium binding motif MSIP34_RS06380 SM00448 cheY-homologous receiver domain MSIP34_RS06380 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS06385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS06385 SM00387 Histidine kinase-like ATPases MSIP34_RS06385 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS06390 SM00100 Cyclic nucleotide-monophosphate binding domain MSIP34_RS06390 SM00419 helix_turn_helix, cAMP Regulatory protein MSIP34_RS06410 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS06435 SM00028 Tetratricopeptide repeats MSIP34_RS06440 SM00487 DEAD-like helicases superfamily MSIP34_RS06440 SM00490 helicase superfamily c-terminal domain MSIP34_RS06445 SM00316 Ribosomal protein S1-like RNA-binding domain MSIP34_RS06450 SM00363 S4 RNA-binding domain MSIP34_RS06475 SM00642 Alpha-amylase domain MSIP34_RS06500 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS06500 SM00267 diguanylate cyclase MSIP34_RS06550 SM00646 MSIP34_RS06550 MSIP34_RS06555 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS06555 SM01027 Beta-Casp domain MSIP34_RS06565 SM00853 MutL C terminal dimerisation domain MSIP34_RS06565 SM01340 MSIP34_RS06565 MSIP34_RS06600 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS06600 SM00267 diguanylate cyclase MSIP34_RS06605 SM00028 Tetratricopeptide repeats MSIP34_RS06665 SM00422 helix_turn_helix, mercury resistance MSIP34_RS06680 SM00564 beta-propeller repeat MSIP34_RS06720 SM00771 ZipA, C-terminal domain (FtsZ-binding) MSIP34_RS06725 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MSIP34_RS06725 SM00292 breast cancer carboxy-terminal domain MSIP34_RS06725 SM00532 Ligase N family MSIP34_RS06735 SM00028 Tetratricopeptide repeats MSIP34_RS06775 SM00155 Phospholipase D. Active site motifs. MSIP34_RS06785 SM00054 EF-hand, calcium binding motif MSIP34_RS06795 SM00829 Enoylreductase MSIP34_RS06800 SM01130 MSIP34_RS06800 MSIP34_RS06860 SM00822 MSIP34_RS06860 MSIP34_RS06865 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS06865 SM00448 cheY-homologous receiver domain MSIP34_RS06880 SM00867 YceI-like domain MSIP34_RS06895 SM00357 Cold shock protein domain MSIP34_RS06910 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS06950 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS06950 SM00448 cheY-homologous receiver domain MSIP34_RS06975 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MSIP34_RS07005 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS07040 SM00825 Beta-ketoacyl synthase MSIP34_RS07050 SM00822 MSIP34_RS07050 MSIP34_RS07055 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MSIP34_RS07075 SM00878 Biotin carboxylase C-terminal domain MSIP34_RS07125 SM00935 Outer membrane protein (OmpH-like) MSIP34_RS07135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MSIP34_RS07180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MSIP34_RS07255 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS07260 SM01005 Alanine racemase, C-terminal domain MSIP34_RS07265 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS07310 SM00479 MSIP34_RS07310 MSIP34_RS07360 SM00479 MSIP34_RS07360 MSIP34_RS07375 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS07380 SM00257 Lysin motif MSIP34_RS07420 SM00411 bacterial (prokaryotic) histone like domain MSIP34_RS07425 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS07425 SM00464 Found in ATP-dependent protease La (LON) MSIP34_RS07430 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS07430 SM00994 ClpX C4-type zinc finger MSIP34_RS07430 SM01086 C-terminal, D2-small domain, of ClpB protein MSIP34_RS07505 SM01040 BRO family, N-terminal domain MSIP34_RS07520 SM00857 Resolvase, N terminal domain MSIP34_RS07580 SM00267 diguanylate cyclase MSIP34_RS07630 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MSIP34_RS07755 SM00341 Helicase and RNase D C-terminal MSIP34_RS07755 SM00487 DEAD-like helicases superfamily MSIP34_RS07755 SM00490 helicase superfamily c-terminal domain MSIP34_RS07755 SM00956 MSIP34_RS07755 MSIP34_RS07765 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS07795 SM00267 diguanylate cyclase MSIP34_RS07800 SM00830 Chorismate mutase type II MSIP34_RS07810 SM00434 DNA Topoisomerase IV MSIP34_RS07885 SM00859 Semialdehyde dehydrogenase, NAD binding domain MSIP34_RS07890 SM01329 MSIP34_RS07890 MSIP34_RS07970 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS07970 SM00448 cheY-homologous receiver domain MSIP34_RS07975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS07975 SM00091 PAS domain MSIP34_RS07975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS07975 SM00387 Histidine kinase-like ATPases MSIP34_RS07995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS07995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS08030 SM00965 Secretin and TonB N terminus short domain MSIP34_RS08050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MSIP34_RS08055 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS08065 SM00100 Cyclic nucleotide-monophosphate binding domain MSIP34_RS08065 SM00419 helix_turn_helix, cAMP Regulatory protein MSIP34_RS08075 SM00448 cheY-homologous receiver domain MSIP34_RS08080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MSIP34_RS08080 SM00387 Histidine kinase-like ATPases MSIP34_RS08080 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS08105 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS08105 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS08105 SM00267 diguanylate cyclase MSIP34_RS08105 SM01079 MSIP34_RS08105 MSIP34_RS08110 SM00345 helix_turn_helix gluconate operon transcriptional repressor MSIP34_RS08485 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain MSIP34_RS08490 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS08500 SM00493 MSIP34_RS08500 MSIP34_RS08545 SM00788 Adenylosuccinate synthetase MSIP34_RS08560 SM00244 prohibitin homologues MSIP34_RS08565 SM00244 prohibitin homologues MSIP34_RS08610 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS08610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS08610 SM00091 PAS domain MSIP34_RS08610 SM00267 diguanylate cyclase MSIP34_RS08620 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS08655 SM00363 S4 RNA-binding domain MSIP34_RS08665 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS08670 SM00564 beta-propeller repeat MSIP34_RS08705 SM00028 Tetratricopeptide repeats MSIP34_RS08715 SM00562 MSIP34_RS08715 MSIP34_RS08720 SM00967 RNA 2'-O ribose methyltransferase substrate binding MSIP34_RS08725 SM00316 Ribosomal protein S1-like RNA-binding domain MSIP34_RS08725 SM00357 Cold shock protein domain MSIP34_RS08725 SM00955 MSIP34_RS08725 MSIP34_RS08745 SM00984 UDP binding domain MSIP34_RS08755 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS08760 SM00363 S4 RNA-binding domain MSIP34_RS08785 SM01080 MSIP34_RS08785 MSIP34_RS08800 SM00838 Elongation factor G C-terminus MSIP34_RS08805 SM00487 DEAD-like helicases superfamily MSIP34_RS08805 SM00490 helicase superfamily c-terminal domain MSIP34_RS08810 SM00487 DEAD-like helicases superfamily MSIP34_RS08810 SM00490 helicase superfamily c-terminal domain MSIP34_RS08825 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS08825 SM00448 cheY-homologous receiver domain MSIP34_RS08840 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS08850 SM00977 TilS substrate C-terminal domain MSIP34_RS08860 SM00481 DNA polymerase alpha chain like domain MSIP34_RS08865 SM00073 Histidine Phosphotransfer domain MSIP34_RS08865 SM00260 Two component signalling adaptor domain MSIP34_RS08865 SM00387 Histidine kinase-like ATPases MSIP34_RS08865 SM00448 cheY-homologous receiver domain MSIP34_RS08865 SM01231 MSIP34_RS08865 MSIP34_RS08870 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS08875 SM00260 Two component signalling adaptor domain MSIP34_RS08880 SM00448 cheY-homologous receiver domain MSIP34_RS08885 SM00448 cheY-homologous receiver domain MSIP34_RS08890 SM00897 FIST N domain MSIP34_RS08890 SM01204 MSIP34_RS08890 MSIP34_RS08930 SM00363 S4 RNA-binding domain MSIP34_RS08930 SM01390 MSIP34_RS08930 MSIP34_RS08945 SM00387 Histidine kinase-like ATPases MSIP34_RS09005 SM00358 Double-stranded RNA binding motif MSIP34_RS09005 SM00535 Ribonuclease III family MSIP34_RS09020 SM00838 Elongation factor G C-terminus MSIP34_RS09025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MSIP34_RS09085 SM01204 MSIP34_RS09085 MSIP34_RS09090 SM00478 endonuclease III MSIP34_RS09090 SM00525 MSIP34_RS09090 MSIP34_RS09100 SM01130 MSIP34_RS09100 MSIP34_RS09110 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS09130 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. MSIP34_RS09165 SM00984 UDP binding domain MSIP34_RS09170 SM00564 beta-propeller repeat MSIP34_RS09190 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MSIP34_RS09190 SM00534 ATPase domain of DNA mismatch repair MUTS family MSIP34_RS09305 SM00100 Cyclic nucleotide-monophosphate binding domain MSIP34_RS09310 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS09365 SM00271 DnaJ molecular chaperone homology domain MSIP34_RS09380 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS09380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS09380 SM00091 PAS domain MSIP34_RS09380 SM00267 diguanylate cyclase MSIP34_RS09400 SM00937 MSIP34_RS09400 MSIP34_RS09420 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09455 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS09460 SM00014 Acid phosphatase homologues MSIP34_RS09475 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09485 SM01103 MSIP34_RS09485 MSIP34_RS09500 SM00851 MGS-like domain MSIP34_RS09500 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MSIP34_RS09505 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain MSIP34_RS09650 SM00271 DnaJ molecular chaperone homology domain MSIP34_RS09685 SM00917 LeuA allosteric (dimerisation) domain MSIP34_RS09700 SM00062 Bacterial periplasmic substrate-binding proteins MSIP34_RS09700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS09730 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09730 SM00962 SRP54-type protein, GTPase domain MSIP34_RS09730 SM00963 SRP54-type protein, helical bundle domain MSIP34_RS09735 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09755 SM00893 Electron transfer flavoprotein domain MSIP34_RS09760 SM00893 Electron transfer flavoprotein domain MSIP34_RS09815 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09835 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09900 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS09910 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS09910 SM00062 Bacterial periplasmic substrate-binding proteins MSIP34_RS09910 SM00267 diguanylate cyclase MSIP34_RS09950 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS09990 SM00869 Autotransporter beta-domain MSIP34_RS10015 SM01007 Class II Aldolase and Adducin N-terminal domain MSIP34_RS10020 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS10110 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain MSIP34_RS10110 SM01232 MSIP34_RS10110 MSIP34_RS10130 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS10135 SM00028 Tetratricopeptide repeats MSIP34_RS10155 SM01400 MSIP34_RS10155 MSIP34_RS10185 SM00248 ankyrin repeats MSIP34_RS10200 SM00830 Chorismate mutase type II MSIP34_RS10295 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS10550 SM00318 Staphylococcal nuclease homologues MSIP34_RS10625 SM00448 cheY-homologous receiver domain MSIP34_RS10625 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS10630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS10630 SM00387 Histidine kinase-like ATPases MSIP34_RS10630 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS10655 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS10660 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS10675 SM00116 Domain in cystathionine beta-synthase and other proteins. MSIP34_RS10675 SM01091 Transporter associated domain MSIP34_RS10700 SM00836 DALR anticodon binding domain MSIP34_RS10710 SM00563 Phosphate acyltransferases MSIP34_RS10840 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS10855 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS10905 SM00965 Secretin and TonB N terminus short domain MSIP34_RS10975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MSIP34_RS10980 SM00852 Probable molybdopterin binding domain MSIP34_RS11010 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS11020 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MSIP34_RS11055 SM01060 MSIP34_RS11055 MSIP34_RS11070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS11070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS11075 SM00919 Malic enzyme, NAD binding domain MSIP34_RS11075 SM01274 MSIP34_RS11075 MSIP34_RS11105 SM00387 Histidine kinase-like ATPases MSIP34_RS11105 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS11110 SM00448 cheY-homologous receiver domain MSIP34_RS11115 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS11115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS11115 SM00091 PAS domain MSIP34_RS11115 SM00267 diguanylate cyclase MSIP34_RS11115 SM00448 cheY-homologous receiver domain MSIP34_RS11125 SM00116 Domain in cystathionine beta-synthase and other proteins. MSIP34_RS11175 SM00749 bacterial OsmY and nodulation domain MSIP34_RS11180 SM01322 MSIP34_RS11180 MSIP34_RS11190 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS11190 SM00962 SRP54-type protein, GTPase domain MSIP34_RS11190 SM00963 SRP54-type protein, helical bundle domain MSIP34_RS11210 SM00917 LeuA allosteric (dimerisation) domain MSIP34_RS11225 SM01323 MSIP34_RS11225 MSIP34_RS11240 SM01091 Transporter associated domain MSIP34_RS11250 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS11250 SM01086 C-terminal, D2-small domain, of ClpB protein MSIP34_RS11275 SM00938 Nitrogen regulatory protein P-II MSIP34_RS11285 SM00938 Nitrogen regulatory protein P-II MSIP34_RS11310 SM00840 MSIP34_RS11310 MSIP34_RS11315 SM00028 Tetratricopeptide repeats MSIP34_RS11340 SM00240 Forkhead associated domain MSIP34_RS11360 SM00448 cheY-homologous receiver domain MSIP34_RS11360 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS11365 SM00091 PAS domain MSIP34_RS11365 SM00387 Histidine kinase-like ATPases MSIP34_RS11365 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS11420 SM00563 Phosphate acyltransferases MSIP34_RS11495 SM00986 Uracil DNA glycosylase superfamily MSIP34_RS11495 SM00987 UreE urease accessory protein, C-terminal domain MSIP34_RS11545 SM00883 Chaperonin 10 Kd subunit MSIP34_RS11575 SM00491 MSIP34_RS11575 MSIP34_RS11615 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS11615 SM00267 diguanylate cyclase MSIP34_RS11615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS11645 SM00749 bacterial OsmY and nodulation domain MSIP34_RS11670 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS11680 SM00357 Cold shock protein domain MSIP34_RS11680 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS11680 SM00959 Rho termination factor, N-terminal domain MSIP34_RS11695 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS11720 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS11735 SM00852 Probable molybdopterin binding domain MSIP34_RS11760 SM00849 Metallo-beta-lactamase superfamily MSIP34_RS11770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS11770 SM00387 Histidine kinase-like ATPases MSIP34_RS11770 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS11780 SM00670 Large family of predicted nucleotide-binding domains MSIP34_RS11805 SM00062 Bacterial periplasmic substrate-binding proteins MSIP34_RS11810 SM00564 beta-propeller repeat MSIP34_RS11820 SM00100 Cyclic nucleotide-monophosphate binding domain MSIP34_RS11825 SM00450 Rhodanese Homology Domain MSIP34_RS11845 SM00822 MSIP34_RS11845 MSIP34_RS11885 SM00448 cheY-homologous receiver domain MSIP34_RS11885 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS11890 SM00387 Histidine kinase-like ATPases MSIP34_RS11890 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS11975 SM00400 zinc finger MSIP34_RS11975 SM00493 MSIP34_RS11975 MSIP34_RS11995 SM01207 MSIP34_RS11995 MSIP34_RS12000 SM00905 Dihydroneopterin aldolase MSIP34_RS12055 SM00028 Tetratricopeptide repeats MSIP34_RS12090 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS12095 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MSIP34_RS12120 SM00347 helix_turn_helix multiple antibiotic resistance protein MSIP34_RS12125 SM00116 Domain in cystathionine beta-synthase and other proteins. MSIP34_RS12170 SM00028 Tetratricopeptide repeats MSIP34_RS12190 SM01230 MSIP34_RS12190 MSIP34_RS12215 SM00530 Helix-turn-helix XRE-family like proteins MSIP34_RS12230 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS12250 SM00155 Phospholipase D. Active site motifs. MSIP34_RS12255 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS12255 SM00091 PAS domain MSIP34_RS12255 SM00267 diguanylate cyclase MSIP34_RS12260 SM00046 Diacylglycerol kinase catalytic domain (presumed) MSIP34_RS12270 SM00014 Acid phosphatase homologues MSIP34_RS12275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MSIP34_RS12275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS12275 SM00091 PAS domain MSIP34_RS12275 SM00267 diguanylate cyclase MSIP34_RS12300 SM00155 Phospholipase D. Active site motifs. MSIP34_RS12340 SM00834 Putative regulatory protein MSIP34_RS12345 SM00893 Electron transfer flavoprotein domain MSIP34_RS12350 SM00893 Electron transfer flavoprotein domain MSIP34_RS12385 SM00421 helix_turn_helix, Lux Regulon MSIP34_RS12385 SM00448 cheY-homologous receiver domain MSIP34_RS12390 SM00387 Histidine kinase-like ATPases MSIP34_RS12395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS12395 SM00091 PAS domain MSIP34_RS12425 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS12425 SM00267 diguanylate cyclase MSIP34_RS12430 SM00387 Histidine kinase-like ATPases MSIP34_RS12430 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS12435 SM00448 cheY-homologous receiver domain MSIP34_RS12435 SM00862 Transcriptional regulatory protein, C terminal MSIP34_RS12465 SM00822 MSIP34_RS12465 MSIP34_RS12490 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS12490 SM00871 Bacterial transcription activator, effector binding domain MSIP34_RS12530 SM00450 Rhodanese Homology Domain MSIP34_RS12535 SM01230 MSIP34_RS12535 MSIP34_RS12545 SM00091 PAS domain MSIP34_RS12545 SM00387 Histidine kinase-like ATPases MSIP34_RS12545 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS12550 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS12550 SM00448 cheY-homologous receiver domain MSIP34_RS12555 SM00028 Tetratricopeptide repeats MSIP34_RS12570 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MSIP34_RS12585 SM00965 Secretin and TonB N terminus short domain MSIP34_RS12605 SM00842 Cell division protein FtsA MSIP34_RS12620 SM01004 Delta-aminolevulinic acid dehydratase MSIP34_RS12665 SM00937 MSIP34_RS12665 MSIP34_RS12720 SM00986 Uracil DNA glycosylase superfamily MSIP34_RS12720 SM00987 UreE urease accessory protein, C-terminal domain MSIP34_RS12725 SM00845 GatB domain MSIP34_RS12770 SM00936 Penicillin-binding protein 5, C-terminal domain MSIP34_RS12790 SM00729 Elongator protein 3, MiaB family, Radical SAM MSIP34_RS12800 SM00345 helix_turn_helix gluconate operon transcriptional repressor MSIP34_RS12805 SM00564 beta-propeller repeat MSIP34_RS12825 SM01209 MSIP34_RS12825 MSIP34_RS12825 SM01210 MSIP34_RS12825 MSIP34_RS12835 SM01236 MSIP34_RS12835 MSIP34_RS12875 SM00642 Alpha-amylase domain MSIP34_RS12885 SM00642 Alpha-amylase domain MSIP34_RS12890 SM00642 Alpha-amylase domain MSIP34_RS12915 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen MSIP34_RS12965 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS12970 SM01018 B12 binding domain MSIP34_RS12980 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS12995 SM00938 Nitrogen regulatory protein P-II MSIP34_RS13015 SM00564 beta-propeller repeat MSIP34_RS13100 SM00478 endonuclease III MSIP34_RS13100 SM00525 MSIP34_RS13100 MSIP34_RS13125 SM00363 S4 RNA-binding domain MSIP34_RS13140 SM00822 MSIP34_RS13140 MSIP34_RS13170 SM00387 Histidine kinase-like ATPases MSIP34_RS13170 SM00388 His Kinase A (phosphoacceptor) domain MSIP34_RS13175 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS13175 SM00448 cheY-homologous receiver domain MSIP34_RS13180 SM00650 Ribosomal RNA adenine dimethylases MSIP34_RS13255 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS13260 SM00345 helix_turn_helix gluconate operon transcriptional repressor MSIP34_RS13260 SM00866 MSIP34_RS13260 MSIP34_RS13265 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS13285 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS13310 SM00357 Cold shock protein domain MSIP34_RS13315 SM00749 bacterial OsmY and nodulation domain MSIP34_RS13350 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS13350 SM00091 PAS domain MSIP34_RS13350 SM00267 diguanylate cyclase MSIP34_RS13355 SM00100 Cyclic nucleotide-monophosphate binding domain MSIP34_RS13355 SM00419 helix_turn_helix, cAMP Regulatory protein MSIP34_RS13360 SM01068 Putative carbohydrate binding domain MSIP34_RS13365 SM00347 helix_turn_helix multiple antibiotic resistance protein MSIP34_RS13375 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS13375 SM00091 PAS domain MSIP34_RS13375 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS13385 SM00345 helix_turn_helix gluconate operon transcriptional repressor MSIP34_RS13410 SM00267 diguanylate cyclase MSIP34_RS13415 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS13420 SM01060 MSIP34_RS13420 MSIP34_RS13425 SM00347 helix_turn_helix multiple antibiotic resistance protein MSIP34_RS13430 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS13500 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS13515 SM00327 von Willebrand factor (vWF) type A domain MSIP34_RS13530 SM00829 Enoylreductase MSIP34_RS13545 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS13545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS13545 SM00267 diguanylate cyclase MSIP34_RS13550 SM00448 cheY-homologous receiver domain MSIP34_RS13560 SM00138 Methyltransferase, chemotaxis proteins MSIP34_RS13565 SM00260 Two component signalling adaptor domain MSIP34_RS13570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS13575 SM00260 Two component signalling adaptor domain MSIP34_RS13580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS13580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MSIP34_RS13590 SM00260 Two component signalling adaptor domain MSIP34_RS13595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS13600 SM00073 Histidine Phosphotransfer domain MSIP34_RS13600 SM00260 Two component signalling adaptor domain MSIP34_RS13600 SM00387 Histidine kinase-like ATPases MSIP34_RS13600 SM01231 MSIP34_RS13600 MSIP34_RS13610 SM00448 cheY-homologous receiver domain MSIP34_RS13615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). MSIP34_RS13640 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS13640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS13640 SM00091 PAS domain MSIP34_RS13640 SM00267 diguanylate cyclase MSIP34_RS13665 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS13670 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS13670 SM00267 diguanylate cyclase MSIP34_RS13680 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS13680 SM00062 Bacterial periplasmic substrate-binding proteins MSIP34_RS13680 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS13680 SM00091 PAS domain MSIP34_RS13680 SM00267 diguanylate cyclase MSIP34_RS13695 SM00822 MSIP34_RS13695 MSIP34_RS13700 SM00450 Rhodanese Homology Domain MSIP34_RS13725 SM00460 Transglutaminase/protease-like homologues MSIP34_RS13740 SM00671 Sel1-like repeats. MSIP34_RS13745 SM00116 Domain in cystathionine beta-synthase and other proteins. MSIP34_RS13745 SM01091 Transporter associated domain MSIP34_RS13750 SM00357 Cold shock protein domain MSIP34_RS13770 SM00342 helix_turn_helix, arabinose operon control protein MSIP34_RS13805 SM00965 Secretin and TonB N terminus short domain MSIP34_RS13820 SM00411 bacterial (prokaryotic) histone like domain MSIP34_RS13855 SM00642 Alpha-amylase domain MSIP34_RS13875 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS13875 SM00267 diguanylate cyclase MSIP34_RS13885 SM00267 diguanylate cyclase MSIP34_RS13895 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MSIP34_RS13900 SM00563 Phosphate acyltransferases MSIP34_RS13915 SM00235 Zinc-dependent metalloprotease MSIP34_RS13930 SM00925 MltA specific insert domain MSIP34_RS13950 SM00028 Tetratricopeptide repeats MSIP34_RS13970 SM00822 MSIP34_RS13970 MSIP34_RS14020 SM00465 GIY-YIG type nucleases (URI domain) MSIP34_RS14020 SM00479 MSIP34_RS14020 MSIP34_RS14065 SM00487 DEAD-like helicases superfamily MSIP34_RS14065 SM00490 helicase superfamily c-terminal domain MSIP34_RS14070 SM00836 DALR anticodon binding domain MSIP34_RS14070 SM01016 Arginyl tRNA synthetase N terminal dom MSIP34_RS14090 SM00052 Putative diguanylate phosphodiesterase MSIP34_RS14090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) MSIP34_RS14090 SM00091 PAS domain MSIP34_RS14090 SM00267 diguanylate cyclase MSIP34_RS14110 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS14150 SM00470 ParB-like nuclease domain MSIP34_RS14165 SM01228 MSIP34_RS14165 MSIP34_RS14230 SM00090 RIO-like kinase MSIP34_RS14460 SM00331 Sigma factor PP2C-like phosphatases MSIP34_RS14460 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MSIP34_RS14650 SM00530 Helix-turn-helix XRE-family like proteins MSIP34_RS14680 SM00382 ATPases associated with a variety of cellular activities MSIP34_RS14695 SM00257 Lysin motif MSIP34_RS14705 SM00642 Alpha-amylase domain