MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 PIRSF PIRSF002144 1 91 1.3E-31 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 SUPERFAMILY SSF54570 3 84 3.92E-34 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.98 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.8E-23 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.8E-23 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.8E-23 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 Gene3D G3DSA:3.30.860.10 1 90 1.0E-39 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 Pfam PF00203 Ribosomal protein S19 3 83 3.7E-35 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 7.4E-44 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01600 f6f9198b1292ba6e220d87f6e63e77ec 91 PANTHER PTHR11880 1 91 2.3E-50 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03080 8716a74405116f4d1bedc1519d590537 281 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 279 1.2E-74 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 MSIP34_RS03080 8716a74405116f4d1bedc1519d590537 281 Pfam PF02666 Phosphatidylserine decarboxylase 63 278 1.2E-57 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 MSIP34_RS03080 8716a74405116f4d1bedc1519d590537 281 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 281 45.567 T 23-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 MSIP34_RS03080 8716a74405116f4d1bedc1519d590537 281 PANTHER PTHR10067 1 278 7.8E-96 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 SMART SM00857 5 147 1.2E-53 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 ProSitePatterns PS00398 Site-specific recombinases signature 2. 65 77 - T 23-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 PANTHER PTHR30461 2 186 9.5E-48 T 23-04-2016 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 SUPERFAMILY SSF53041 4 146 1.19E-39 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 Gene3D G3DSA:1.10.10.60 148 186 9.9E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 PANTHER PTHR30461:SF9 2 186 9.5E-48 T 23-04-2016 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 Gene3D G3DSA:3.40.50.1390 4 130 2.3E-36 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MSIP34_RS07520 60207af8a256fd3b7e5867764c888de6 194 Pfam PF00239 Resolvase, N terminal domain 5 146 1.4E-38 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 MSIP34_RS03975 d4087982c4c54beb798714ba283337db 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 2.3E-52 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 MSIP34_RS03975 d4087982c4c54beb798714ba283337db 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site MSIP34_RS03975 d4087982c4c54beb798714ba283337db 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 130 3.1E-12 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MSIP34_RS03975 d4087982c4c54beb798714ba283337db 134 PANTHER PTHR30435:SF2 1 134 9.1E-64 T 23-04-2016 MSIP34_RS03975 d4087982c4c54beb798714ba283337db 134 PANTHER PTHR30435 1 134 9.1E-64 T 23-04-2016 MSIP34_RS03975 d4087982c4c54beb798714ba283337db 134 Pfam PF00460 Flagella basal body rod protein 7 32 3.4E-7 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 6.5E-67 T 23-04-2016 MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 SUPERFAMILY SSF51735 7 250 9.09E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.9E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.9E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.9E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PANTHER PTHR24322:SF608 157 189 1.7E-65 T 23-04-2016 MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PANTHER PTHR24322:SF608 12 140 1.7E-65 T 23-04-2016 MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 Gene3D G3DSA:3.40.50.720 3 250 2.2E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 193 0.0077 T 23-04-2016 MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PANTHER PTHR24322 157 189 1.7E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS12465 ef381326211c03164f5db305f718cc69 251 PANTHER PTHR24322 12 140 1.7E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS00250 ac22b8a3461748b4912fa9edbdf7e046 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 5.6E-83 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 MSIP34_RS00250 ac22b8a3461748b4912fa9edbdf7e046 288 PANTHER PTHR30636 1 288 6.7E-97 T 23-04-2016 MSIP34_RS00250 ac22b8a3461748b4912fa9edbdf7e046 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 7.2E-35 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 MSIP34_RS00250 ac22b8a3461748b4912fa9edbdf7e046 288 Pfam PF03755 YicC-like family, N-terminal region 4 154 2.7E-37 T 23-04-2016 IPR013527 YicC-like, N-terminal MSIP34_RS06920 a6e740fc8271584de662aff288ba9162 517 Pfam PF00474 Sodium:solute symporter family 32 426 3.8E-15 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 Gene3D G3DSA:1.10.340.30 44 156 1.8E-32 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 SUPERFAMILY SSF48150 39 206 6.63E-42 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 PANTHER PTHR10242 12 206 1.5E-57 T 23-04-2016 MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 Gene3D G3DSA:1.10.1670.10 158 208 2.6E-16 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 SMART SM00478 53 209 7.4E-21 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 PANTHER PTHR10242:SF0 12 206 1.5E-57 T 23-04-2016 MSIP34_RS03665 d87ca427846ed57474dd5f1c01502db9 224 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 193 7.9E-16 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Pfam PF00512 His Kinase A (phospho-acceptor) domain 675 740 1.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 SUPERFAMILY SSF52402 253 375 4.94E-12 T 23-04-2016 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Pfam PF00582 Universal stress protein family 253 370 6.6E-10 T 23-04-2016 IPR006016 UspA GO:0006950 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Gene3D G3DSA:3.30.565.10 742 898 2.1E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 SUPERFAMILY SSF55781 516 658 1.35E-10 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Gene3D G3DSA:3.40.50.300 22 231 4.9E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 786 892 2.5E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PANTHER PTHR24423 608 897 1.8E-142 T 23-04-2016 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PANTHER PTHR24423 18 199 1.8E-142 T 23-04-2016 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 SUPERFAMILY SSF55874 730 892 2.49E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Gene3D G3DSA:1.10.287.130 670 736 1.1E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Gene3D G3DSA:3.30.450.40 515 659 7.0E-10 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PANTHER PTHR24423:SF562 608 897 1.8E-142 T 23-04-2016 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PANTHER PTHR24423:SF562 18 199 1.8E-142 T 23-04-2016 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 23 232 5.2E-97 T 23-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Pfam PF13493 Domain of unknown function (DUF4118) 409 513 7.6E-31 T 23-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Gene3D G3DSA:3.40.50.620 247 369 3.2E-12 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Gene3D G3DSA:1.20.120.620 407 509 3.0E-37 T 23-04-2016 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 Pfam PF13492 GAF domain 535 655 2.5E-14 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 872 2.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 839 849 2.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 835 2.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 PRINTS PR00344 Bacterial sensor protein C-terminal signature 878 891 2.2E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 SMART SM00387 784 894 8.8E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 SUPERFAMILY SSF47384 669 741 2.16E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS05400 9f5d45e7388e68f48c9df3df0a5ef778 906 SMART SM00388 674 740 2.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 SUPERFAMILY SSF46689 373 425 1.13E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 SUPERFAMILY SSF52172 2 178 1.85E-40 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 PANTHER PTHR32071:SF17 3 427 6.4E-76 T 23-04-2016 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 SUPERFAMILY SSF52540 142 350 1.14E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Pfam PF02954 Bacterial regulatory protein, Fis family 382 422 1.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Pfam PF14532 Sigma-54 interaction domain 136 273 1.0E-48 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Pfam PF00072 Response regulator receiver domain 6 116 7.7E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Gene3D G3DSA:3.40.50.2300 3 126 4.4E-34 T 23-04-2016 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Gene3D G3DSA:1.10.8.60 276 345 8.8E-11 T 23-04-2016 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Gene3D G3DSA:3.40.50.300 136 273 1.2E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 SMART SM00448 4 116 8.8E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 PANTHER PTHR32071 3 427 6.4E-76 T 23-04-2016 MSIP34_RS01005 92d63a23b2e14cc131f4ca1069f900d2 427 Gene3D G3DSA:1.10.10.60 371 425 9.4E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SUPERFAMILY SSF55666 144 235 1.26E-29 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Gene3D G3DSA:1.10.10.400 225 314 2.5E-22 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Gene3D G3DSA:3.30.1370.10 552 617 9.5E-26 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Gene3D G3DSA:2.40.50.140 618 692 1.7E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 2.0E-24 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 2.0E-24 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Gene3D G3DSA:3.30.230.70 315 542 3.5E-90 T 23-04-2016 IPR027408 PNPase/RNase PH domain MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Gene3D G3DSA:3.30.230.70 3 224 3.9E-86 T 23-04-2016 IPR027408 PNPase/RNase PH domain MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF00013 KH domain 556 613 1.3E-8 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SUPERFAMILY SSF55666 453 560 5.05E-29 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF03725 3' exoribonuclease family, domain 2 146 201 2.3E-9 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF03725 3' exoribonuclease family, domain 2 461 529 6.3E-6 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF00575 S1 RNA binding domain 619 690 1.3E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 PANTHER PTHR11252:SF0 4 707 0.0 T 23-04-2016 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SUPERFAMILY SSF54791 554 639 1.33E-21 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 693 30.659 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 PANTHER PTHR11252 4 707 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 1.4E-22 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SUPERFAMILY SSF50249 620 703 1.56E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SUPERFAMILY SSF54211 3 143 4.71E-53 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SMART SM00316 620 690 5.1E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 PIRSF PIRSF005499 1 707 1.4E-299 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SUPERFAMILY SSF54211 291 488 1.16E-50 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS00395 273899f7c00fd466f2d94688db3f658e 707 SMART SM00322 552 617 3.1E-12 T 23-04-2016 IPR004087 K Homology domain GO:0003676 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 271 3.6E-79 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 SUPERFAMILY SSF51735 102 272 1.05E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 Gene3D G3DSA:3.40.50.720 109 250 2.6E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 PANTHER PTHR21089:SF2 1 274 1.2E-118 T 23-04-2016 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 PANTHER PTHR21089 1 274 1.2E-118 T 23-04-2016 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 Gene3D G3DSA:3.40.192.10 2 108 5.7E-37 T 23-04-2016 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 197 1.7E-9 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 273 30.778 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 2.7E-23 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12525 9e25be0cac60c0c41fdd81467a50d2d0 274 SUPERFAMILY SSF53223 2 101 5.76E-30 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 SUPERFAMILY SSF53067 199 378 2.02E-48 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Gene3D G3DSA:3.30.1490.110 87 157 1.7E-18 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Pfam PF14450 Cell division protein FtsA 12 195 1.2E-10 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Pfam PF14450 Cell division protein FtsA 208 375 3.7E-26 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 378 1.6E-150 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 PANTHER PTHR32432 1 409 1.1E-156 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 PANTHER PTHR32432:SF4 1 409 1.1E-156 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Pfam PF02491 SHS2 domain inserted in FTSA 86 163 1.9E-31 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Hamap MF_02033 Cell division protein FtsA [ftsA]. 7 412 31.479 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 PIRSF PIRSF003101 2 412 9.3E-157 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 SUPERFAMILY SSF53067 10 198 1.06E-62 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Gene3D G3DSA:3.90.640.10 236 298 8.3E-21 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 SMART SM00842 11 197 7.0E-105 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Gene3D G3DSA:3.30.420.40 158 210 1.1E-26 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Gene3D G3DSA:3.30.420.40 5 84 1.1E-26 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Gene3D G3DSA:3.30.420.40 211 235 1.7E-33 T 23-04-2016 MSIP34_RS02370 c73ff37c444b3159424466262e34f87f 412 Gene3D G3DSA:3.30.420.40 299 353 1.7E-33 T 23-04-2016 MSIP34_RS00560 28c663d20c0190adbe3de8d1ba8f4650 236 Pfam PF01618 MotA/TolQ/ExbB proton channel family 68 195 6.7E-37 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS00560 28c663d20c0190adbe3de8d1ba8f4650 236 PANTHER PTHR30625:SF3 1 217 6.2E-50 T 23-04-2016 MSIP34_RS00560 28c663d20c0190adbe3de8d1ba8f4650 236 PANTHER PTHR30625 1 217 6.2E-50 T 23-04-2016 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 PIRSF PIRSF001549 1 418 5.8E-116 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 Gene3D G3DSA:3.40.50.800 325 417 1.9E-29 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 418 31.735 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 Pfam PF03129 Anticodon binding domain 331 418 1.9E-12 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 Gene3D G3DSA:3.30.930.10 221 320 1.8E-94 T 23-04-2016 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 Gene3D G3DSA:3.30.930.10 4 185 1.8E-94 T 23-04-2016 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 PANTHER PTHR11476 1 418 1.0E-201 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 SUPERFAMILY SSF52954 326 417 2.57E-21 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.0E-49 T 23-04-2016 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 406 4.3E-153 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 PANTHER PTHR11476:SF9 1 418 1.0E-201 T 23-04-2016 MSIP34_RS08690 f2d847ad47842730d41f6c9c5b15734f 418 SUPERFAMILY SSF55681 5 319 2.3E-103 T 23-04-2016 MSIP34_RS10885 14828d80f2764cd024abe53abe78d578 215 PIRSF PIRSF000705 2 209 3.5E-57 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 MSIP34_RS10885 14828d80f2764cd024abe53abe78d578 215 Pfam PF01712 Deoxynucleoside kinase 10 197 8.6E-40 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain MSIP34_RS10885 14828d80f2764cd024abe53abe78d578 215 PANTHER PTHR10513:SF16 8 203 1.1E-41 T 23-04-2016 MSIP34_RS10885 14828d80f2764cd024abe53abe78d578 215 Gene3D G3DSA:3.40.50.300 5 185 5.6E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10885 14828d80f2764cd024abe53abe78d578 215 SUPERFAMILY SSF52540 6 211 2.7E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10885 14828d80f2764cd024abe53abe78d578 215 PANTHER PTHR10513 8 203 1.1E-41 T 23-04-2016 MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 Gene3D G3DSA:1.10.60.30 28 102 6.8E-30 T 23-04-2016 IPR023153 PSPTO4464-like domain MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 SUPERFAMILY SSF158710 28 170 2.88E-53 T 23-04-2016 MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 Pfam PF04751 Protein of unknown function (DUF615) 20 168 1.6E-55 T 23-04-2016 IPR006839 Ribosome-associated, YjgA MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 21.25 T 23-04-2016 IPR006839 Ribosome-associated, YjgA MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 PANTHER PTHR38101:SF1 1 187 5.7E-56 T 23-04-2016 MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 Gene3D G3DSA:1.10.60.30 104 172 1.5E-30 T 23-04-2016 IPR023153 PSPTO4464-like domain MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 PIRSF PIRSF016183 1 174 4.0E-65 T 23-04-2016 IPR006839 Ribosome-associated, YjgA MSIP34_RS10965 d91cdbba48e19b7cf629c7ae5a7a409a 187 PANTHER PTHR38101 1 187 5.7E-56 T 23-04-2016 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 PANTHER PTHR23151:SF68 2 441 1.6E-206 T 23-04-2016 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 Gene3D G3DSA:2.40.50.100 2 94 1.9E-22 T 23-04-2016 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 Gene3D G3DSA:3.30.559.10 205 441 1.8E-82 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 SUPERFAMILY SSF51230 2 95 2.88E-23 T 23-04-2016 IPR011053 Single hybrid motif MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 Pfam PF02817 e3 binding domain 142 176 4.1E-13 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 Pfam PF00364 Biotin-requiring enzyme 5 76 1.2E-20 T 23-04-2016 IPR000089 Biotin/lipoyl attachment MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 3 441 6.6E-181 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 SUPERFAMILY SSF47005 136 180 4.19E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 Gene3D G3DSA:4.10.320.10 137 186 3.9E-19 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 PANTHER PTHR23151 2 441 1.6E-206 T 23-04-2016 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 211 441 5.5E-79 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 MSIP34_RS03360 ae3911a7723cd2d66f53c17cca627685 441 SUPERFAMILY SSF52777 201 441 5.78E-81 T 23-04-2016 MSIP34_RS11145 dbc673a41a5681d438cd5d6b8d944654 273 PANTHER PTHR31756 1 265 5.2E-95 T 23-04-2016 MSIP34_RS11145 dbc673a41a5681d438cd5d6b8d944654 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 271 68.347 T 23-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein MSIP34_RS11145 dbc673a41a5681d438cd5d6b8d944654 273 PANTHER PTHR31756:SF3 1 265 5.2E-95 T 23-04-2016 MSIP34_RS11145 dbc673a41a5681d438cd5d6b8d944654 273 Pfam PF03618 Kinase/pyrophosphorylase 7 262 6.0E-77 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 MSIP34_RS06355 0fbc6b02d3f3a6558e8fd05b1c18d45b 1305 Pfam PF13502 AsmA-like C-terminal region 1043 1284 6.1E-68 T 23-04-2016 IPR032712 AsmA-like, C-terminal MSIP34_RS06355 0fbc6b02d3f3a6558e8fd05b1c18d45b 1305 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 14 1284 1.8E-245 T 23-04-2016 IPR011836 Conserved hypothetical protein CHP02099 MSIP34_RS06355 0fbc6b02d3f3a6558e8fd05b1c18d45b 1305 PANTHER PTHR38690 1 1301 1.2E-179 T 23-04-2016 MSIP34_RS06355 0fbc6b02d3f3a6558e8fd05b1c18d45b 1305 Pfam PF13116 Protein of unknown function 520 795 3.4E-76 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 256 342 1.4E-9 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 SMART SM00729 19 222 5.2E-4 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 Pfam PF13353 4Fe-4S single cluster domain 27 109 4.2E-9 T 23-04-2016 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 PANTHER PTHR11228:SF32 6 352 2.4E-99 T 23-04-2016 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 16 371 2.8E-156 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 SUPERFAMILY SSF102114 15 324 3.66E-76 T 23-04-2016 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 Pfam PF13186 Iron-sulfur cluster-binding domain 249 315 2.6E-8 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 Pfam PF04055 Radical SAM superfamily 24 180 1.1E-22 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 PIRSF PIRSF037420 4 363 8.5E-111 T 23-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 383 171.667 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 Gene3D G3DSA:3.20.20.70 15 333 1.8E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07765 aa7f9f3ed73241a8910bb1fae4a1b26f 395 PANTHER PTHR11228 6 352 2.4E-99 T 23-04-2016 MSIP34_RS04365 4af85d8afac78873affc7ba46e08974a 218 SMART SM01007 6 180 5.3E-68 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS04365 4af85d8afac78873affc7ba46e08974a 218 PANTHER PTHR22789:SF0 5 212 2.3E-82 T 23-04-2016 MSIP34_RS04365 4af85d8afac78873affc7ba46e08974a 218 Gene3D G3DSA:3.40.225.10 4 208 5.4E-66 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS04365 4af85d8afac78873affc7ba46e08974a 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 180 6.2E-51 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS04365 4af85d8afac78873affc7ba46e08974a 218 SUPERFAMILY SSF53639 4 208 7.85E-67 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS04365 4af85d8afac78873affc7ba46e08974a 218 PANTHER PTHR22789 5 212 2.3E-82 T 23-04-2016 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 Pfam PF14815 NUDIX domain 255 364 1.5E-22 T 23-04-2016 IPR029119 MutY, C-terminal MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 Gene3D G3DSA:3.90.79.10 250 368 2.4E-22 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 SMART SM00525 211 231 0.0045 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 SMART SM00478 59 210 2.3E-46 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 26 287 5.8E-112 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 212 228 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 55 187 6.8E-19 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 ProSitePatterns PS01155 Endonuclease III family signature. 122 149 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 Gene3D G3DSA:1.10.1670.10 143 244 3.5E-40 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 Pfam PF00633 Helix-hairpin-helix motif 120 148 1.4E-7 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 SUPERFAMILY SSF55811 240 365 2.01E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 SUPERFAMILY SSF48150 26 244 1.26E-76 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 PANTHER PTHR10359 28 358 2.1E-99 T 23-04-2016 MSIP34_RS13100 a660b6119ca7b9c27ebaf33135770889 373 Gene3D G3DSA:1.10.340.30 41 142 8.2E-46 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS02855 d252b95d83ed4ab4f9d552ecce37285b 512 PANTHER PTHR11814:SF123 6 492 2.5E-168 T 23-04-2016 MSIP34_RS02855 d252b95d83ed4ab4f9d552ecce37285b 512 PANTHER PTHR11814 6 492 2.5E-168 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 MSIP34_RS02855 d252b95d83ed4ab4f9d552ecce37285b 512 Pfam PF00916 Sulfate permease family 11 385 2.4E-59 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 8.5E-95 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 364 1.6E-168 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 Gene3D G3DSA:3.20.20.105 1 364 8.3E-167 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 PANTHER PTHR21148:SF26 1 365 6.0E-174 T 23-04-2016 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 PANTHER PTHR21148 1 365 6.0E-174 T 23-04-2016 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 357 57.401 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 365 5.1E-163 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11220 ef5b47eca3fd2c4fd740531d15189244 376 SUPERFAMILY SSF51713 1 361 1.07E-162 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SUPERFAMILY SSF54106 355 401 3.92E-6 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 PANTHER PTHR21666 67 360 6.7E-113 T 23-04-2016 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 PANTHER PTHR21666 435 555 6.7E-113 T 23-04-2016 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Pfam PF01464 Transglycosylase SLT domain 137 237 2.6E-25 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SMART SM00257 434 477 7.8E-10 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SMART SM00257 357 401 0.35 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SMART SM00257 511 554 2.5E-10 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 PANTHER PTHR21666:SF206 67 360 6.7E-113 T 23-04-2016 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 PANTHER PTHR21666:SF206 435 555 6.7E-113 T 23-04-2016 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SUPERFAMILY SSF54106 511 553 3.4E-10 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 147 175 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SUPERFAMILY SSF53955 126 286 9.14E-43 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Gene3D G3DSA:3.10.350.10 433 476 7.8E-13 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Gene3D G3DSA:3.10.350.10 355 393 1.0E-6 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Gene3D G3DSA:3.10.350.10 510 554 1.8E-14 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 SUPERFAMILY SSF54106 433 476 3.79E-9 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Pfam PF01476 LysM domain 512 553 1.4E-9 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Pfam PF01476 LysM domain 358 392 0.027 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Pfam PF01476 LysM domain 435 476 3.2E-9 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07380 48d1544bc06350873889ee5cb6bac90e 559 Gene3D G3DSA:1.10.530.10 122 284 7.0E-49 T 23-04-2016 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Gene3D G3DSA:3.20.19.10 161 348 3.4E-83 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Pfam PF11791 Aconitate B N-terminal domain 4 155 2.7E-61 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Gene3D G3DSA:3.30.499.10 393 510 1.7E-60 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 SUPERFAMILY SSF74778 1 159 2.62E-62 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Pfam PF00330 Aconitase family (aconitate hydratase) 462 806 2.5E-37 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Gene3D G3DSA:3.30.499.10 674 845 9.1E-50 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Gene3D G3DSA:3.40.1060.10 511 672 1.8E-81 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 PIRSF PIRSF036687 1 849 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 SUPERFAMILY SSF53732 366 846 3.66E-142 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 SUPERFAMILY SSF52016 162 360 2.94E-62 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 844 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 ProSitePatterns PS01244 Aconitase family signature 2. 751 764 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 370 1.6E-96 T 23-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 ProSitePatterns PS00450 Aconitase family signature 1. 693 710 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 PANTHER PTHR11670 293 853 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS05070 a06fa50f5c39e64b047a7e18266b2d40 854 PANTHER PTHR11670:SF39 293 853 0.0 T 23-04-2016 MSIP34_RS11395 35b86752df95d258819ecbe7f2e259d7 174 Gene3D G3DSA:3.30.530.20 28 174 5.4E-41 T 23-04-2016 IPR023393 START-like domain MSIP34_RS11395 35b86752df95d258819ecbe7f2e259d7 174 SUPERFAMILY SSF55961 28 173 1.57E-30 T 23-04-2016 MSIP34_RS11395 35b86752df95d258819ecbe7f2e259d7 174 PANTHER PTHR39332 19 169 2.6E-23 T 23-04-2016 MSIP34_RS11395 35b86752df95d258819ecbe7f2e259d7 174 PANTHER PTHR39332:SF2 19 169 2.6E-23 T 23-04-2016 MSIP34_RS11395 35b86752df95d258819ecbe7f2e259d7 174 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 28 173 2.5E-32 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 SUPERFAMILY SSF51556 56 367 5.45E-92 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 Gene3D G3DSA:2.30.40.10 2 70 6.4E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 SUPERFAMILY SSF51338 1 55 4.94E-29 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 SUPERFAMILY SSF51338 367 423 4.94E-29 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 Gene3D G3DSA:3.20.20.140 71 406 7.1E-89 T 23-04-2016 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 424 7.0E-103 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 PANTHER PTHR11647:SF70 1 423 2.0E-140 T 23-04-2016 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 33.877 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 PANTHER PTHR11647 1 423 2.0E-140 T 23-04-2016 MSIP34_RS03175 e32b4b84e27cb389af1c82dc1859c55f 425 Pfam PF01979 Amidohydrolase family 52 421 7.6E-12 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 89 4.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 4.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 4.5E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 Gene3D G3DSA:1.10.10.10 17 161 9.1E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 SUPERFAMILY SSF46785 20 163 7.23E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 88 122 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 PANTHER PTHR33164 1 167 6.6E-24 T 23-04-2016 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 PANTHER PTHR33164:SF4 1 167 6.6E-24 T 23-04-2016 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 Pfam PF01047 MarR family 59 113 2.3E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS12120 7150ae48b2afe84a18ed491538e3eb8a 169 SMART SM00347 47 149 9.0E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS09180 d5a0ef86424081052ef7d5d6515e4a48 116 SUPERFAMILY SSF52833 3 116 7.83E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS09180 d5a0ef86424081052ef7d5d6515e4a48 116 Gene3D G3DSA:3.40.30.10 1 116 1.3E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS09180 d5a0ef86424081052ef7d5d6515e4a48 116 PANTHER PTHR30041 1 116 3.6E-39 T 23-04-2016 MSIP34_RS09180 d5a0ef86424081052ef7d5d6515e4a48 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 6.6E-41 T 23-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 MSIP34_RS09180 d5a0ef86424081052ef7d5d6515e4a48 116 Pfam PF03960 ArsC family 7 114 2.3E-19 T 23-04-2016 IPR006660 Arsenate reductase-like MSIP34_RS09180 d5a0ef86424081052ef7d5d6515e4a48 116 PANTHER PTHR30041:SF4 1 116 3.6E-39 T 23-04-2016 MSIP34_RS01275 047ea45870177292a786c477729af081 858 SUPERFAMILY SSF56712 1 598 2.35E-191 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain MSIP34_RS01275 047ea45870177292a786c477729af081 858 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 587 621 6.3E-15 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 620 5.8E-244 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Gene3D G3DSA:2.70.20.10 325 467 2.9E-34 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Gene3D G3DSA:2.70.20.10 187 322 8.2E-29 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 MSIP34_RS01275 047ea45870177292a786c477729af081 858 SUPERFAMILY SSF57783 587 622 3.06E-11 T 23-04-2016 MSIP34_RS01275 047ea45870177292a786c477729af081 858 SMART SM00436 107 195 2.9E-52 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 SMART SM00437 251 521 7.3E-112 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Gene3D G3DSA:1.10.460.10 138 185 5.7E-60 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Gene3D G3DSA:1.10.460.10 468 591 5.7E-60 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 712 53.254 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Gene3D G3DSA:3.40.50.140 2 137 6.1E-42 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS01275 047ea45870177292a786c477729af081 858 SMART SM00493 2 102 2.5E-27 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS01275 047ea45870177292a786c477729af081 858 PANTHER PTHR11390:SF27 1 658 0.0 T 23-04-2016 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Pfam PF01751 Toprim domain 4 116 1.1E-25 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS01275 047ea45870177292a786c477729af081 858 Pfam PF13368 Topoisomerase C-terminal repeat 640 698 2.0E-9 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat MSIP34_RS01275 047ea45870177292a786c477729af081 858 Pfam PF13368 Topoisomerase C-terminal repeat 761 813 6.7E-20 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat MSIP34_RS01275 047ea45870177292a786c477729af081 858 Pfam PF13368 Topoisomerase C-terminal repeat 700 750 9.8E-20 T 23-04-2016 IPR025589 Topoisomerase C-terminal repeat MSIP34_RS01275 047ea45870177292a786c477729af081 858 Pfam PF01131 DNA topoisomerase 131 559 1.0E-129 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 Gene3D G3DSA:3.30.65.10 592 621 1.1E-12 T 23-04-2016 MSIP34_RS01275 047ea45870177292a786c477729af081 858 PANTHER PTHR11390 1 658 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 484 498 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 379 395 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 165 183 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 301 310 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 MSIP34_RS01275 047ea45870177292a786c477729af081 858 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 288 310 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Gene3D G3DSA:1.10.10.10 563 634 1.2E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Pfam PF03979 Sigma-70 factor, region 1.1 23 100 3.3E-28 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Gene3D G3DSA:1.10.601.10 131 470 2.9E-127 T 23-04-2016 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Pfam PF04546 Sigma-70, non-essential region 158 370 1.0E-65 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 425 438 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PANTHER PTHR30603 19 171 4.3E-230 T 23-04-2016 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PANTHER PTHR30603 348 638 4.3E-230 T 23-04-2016 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 SUPERFAMILY SSF88659 474 547 1.57E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 SUPERFAMILY SSF88946 134 468 3.25E-99 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 397 633 1.9E-118 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 397 622 1.0E-38 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Gene3D G3DSA:1.10.10.10 474 525 2.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 22 634 43.574 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Pfam PF00140 Sigma-70 factor, region 1.2 117 149 4.1E-14 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Pfam PF04545 Sigma-70, region 4 569 622 1.7E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 594 620 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PRINTS PR00046 Major sigma-70 factor signature 449 457 7.59E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PRINTS PR00046 Major sigma-70 factor signature 425 438 7.59E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PRINTS PR00046 Major sigma-70 factor signature 609 620 7.59E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PRINTS PR00046 Major sigma-70 factor signature 594 609 7.59E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PRINTS PR00046 Major sigma-70 factor signature 573 585 7.59E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Pfam PF04539 Sigma-70 region 3 480 555 2.0E-23 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 SUPERFAMILY SSF88659 531 633 1.18E-25 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 Pfam PF04542 Sigma-70 region 2 401 470 1.8E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PANTHER PTHR30603:SF0 19 171 4.3E-230 T 23-04-2016 MSIP34_RS11970 77416fdee8e338874c681223096c4bfe 638 PANTHER PTHR30603:SF0 348 638 4.3E-230 T 23-04-2016 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 3.1E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 3.1E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 SUPERFAMILY SSF46689 16 85 1.69E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 PANTHER PTHR30328 1 185 1.9E-30 T 23-04-2016 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 Gene3D G3DSA:1.10.357.10 63 193 5.4E-32 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 Gene3D G3DSA:1.10.10.60 17 61 6.1E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 SUPERFAMILY SSF48498 92 193 6.23E-23 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 8.8E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS06845 edfb35ce1512e8055a34cbb38d10885d 198 PANTHER PTHR30328:SF18 1 185 1.9E-30 T 23-04-2016 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 299 1.3E-123 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 Gene3D G3DSA:3.30.230.20 3 124 2.1E-44 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.8E-108 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 PANTHER PTHR33694:SF1 1 302 1.2E-129 T 23-04-2016 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 SUPERFAMILY SSF54211 133 277 6.3E-54 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 SUPERFAMILY SSF54211 3 124 8.34E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.056 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 PANTHER PTHR33694 1 302 1.2E-129 T 23-04-2016 MSIP34_RS02380 0f59190e7be5d9f2799eefe2134d650b 309 Gene3D G3DSA:3.30.1700.10 128 282 1.0E-62 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 SMART SM00862 147 223 2.3E-6 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 SUPERFAMILY SSF52172 3 129 1.17E-27 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 PANTHER PTHR26402 5 223 4.5E-34 T 23-04-2016 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 223 6.3E-10 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 SUPERFAMILY SSF46894 136 224 5.39E-12 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 PANTHER PTHR26402:SF292 5 223 4.5E-34 T 23-04-2016 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 Gene3D G3DSA:1.10.10.10 138 226 3.3E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 Pfam PF00072 Response regulator receiver domain 7 117 2.0E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 Gene3D G3DSA:3.40.50.2300 3 134 1.3E-26 T 23-04-2016 MSIP34_RS05920 e9d8ddbfc9f2cd58c6f48cf6e5ba01d8 231 SMART SM00448 5 116 2.5E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Gene3D G3DSA:1.10.268.10 363 497 2.8E-49 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Gene3D G3DSA:3.30.1360.40 236 333 3.9E-41 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Gene3D G3DSA:2.120.10.90 531 840 1.1E-136 T 23-04-2016 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 PANTHER PTHR10169:SF48 450 810 0.0 T 23-04-2016 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 PANTHER PTHR10169:SF48 2 417 0.0 T 23-04-2016 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.7E-156 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 844 29.891 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 794 838 2.0E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 738 1.2E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 646 689 3.9E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 638 1.7E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 585 1.7E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 791 1.1E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 841 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 Gene3D G3DSA:3.90.199.10 34 216 1.4E-85 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 SUPERFAMILY SSF101904 533 846 7.46E-111 T 23-04-2016 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 PANTHER PTHR10169 450 810 0.0 T 23-04-2016 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 PANTHER PTHR10169 2 417 0.0 T 23-04-2016 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 SUPERFAMILY SSF56719 30 522 3.79E-183 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 MSIP34_RS07810 133e404eeb2ec9f4a4382ff171dbb322 848 SMART SM00434 11 499 1.1E-302 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 Gene3D G3DSA:3.40.50.10260 8 224 1.1E-60 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 PIRSF PIRSF017184 7 484 1.2E-114 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 Pfam PF01256 Carbohydrate kinase 234 457 7.9E-49 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 SUPERFAMILY SSF53613 215 477 7.75E-63 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 Pfam PF03853 YjeF-related protein N-terminus 20 180 3.5E-44 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 SUPERFAMILY SSF64153 10 231 2.62E-57 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 PANTHER PTHR12592 22 486 1.7E-113 T 23-04-2016 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 1 201 22.073 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 209 478 20.802 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 202 1.7E-38 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 216 471 4.3E-56 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 416 426 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 PANTHER PTHR12592:SF0 22 486 1.7E-113 T 23-04-2016 MSIP34_RS04370 eeec8ef5bc88a944657f570224e037b1 487 Gene3D G3DSA:3.40.1190.20 225 478 2.8E-73 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 Gene3D G3DSA:3.30.70.1430 42 142 7.8E-23 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PANTHER PTHR32063 2 1032 0.0 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 Gene3D G3DSA:3.30.2090.10 191 275 4.6E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 396 420 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 341 364 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 2.2E-42 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 Pfam PF00873 AcrB/AcrD/AcrF family 7 1026 1.7E-293 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 PANTHER PTHR32063:SF24 2 1032 0.0 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82714 191 275 2.88E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 Gene3D G3DSA:1.10.3850.10 812 1029 2.1E-59 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 Gene3D G3DSA:1.10.3850.10 287 504 6.2E-61 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1030 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 Gene3D G3DSA:3.30.2090.10 720 809 1.1E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82866 299 503 2.22E-44 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82714 723 805 1.7E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82866 804 1030 5.23E-57 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82693 159 190 5.13E-13 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82693 276 335 5.13E-13 T 23-04-2016 MSIP34_RS11280 bb449b41ef8cd90c3a9ae9a4795fd34e 1033 SUPERFAMILY SSF82693 43 128 2.54E-19 T 23-04-2016 MSIP34_RS02530 00691186035ca39edd2c65ac96d05bc1 292 SUPERFAMILY SSF51261 152 290 9.42E-55 T 23-04-2016 IPR011055 Duplicated hybrid motif MSIP34_RS02530 00691186035ca39edd2c65ac96d05bc1 292 Pfam PF01551 Peptidase family M23 192 286 5.6E-33 T 23-04-2016 IPR016047 Peptidase M23 MSIP34_RS02530 00691186035ca39edd2c65ac96d05bc1 292 PANTHER PTHR21666 139 290 4.4E-47 T 23-04-2016 MSIP34_RS02530 00691186035ca39edd2c65ac96d05bc1 292 Gene3D G3DSA:2.70.70.10 141 290 1.6E-48 T 23-04-2016 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.9E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PIRSF PIRSF039144 1 112 6.0E-56 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PANTHER PTHR30115:SF12 1 112 1.6E-68 T 23-04-2016 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PANTHER PTHR30115 1 112 1.6E-68 T 23-04-2016 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 Gene3D G3DSA:3.30.70.120 1 112 7.2E-51 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 SUPERFAMILY SSF54913 1 112 9.53E-46 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PRINTS PR00340 P-II protein signature 83 103 1.4E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PRINTS PR00340 P-II protein signature 2 17 1.4E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PRINTS PR00340 P-II protein signature 52 75 1.4E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 PRINTS PR00340 P-II protein signature 23 41 1.4E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 SMART SM00938 4 105 1.1E-67 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS04635 887254964b8cb0c4b07ff8ef818bc2b9 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Gene3D G3DSA:3.40.50.300 5 213 3.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.035 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PANTHER PTHR23115 1 395 1.7E-264 T 23-04-2016 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 SUPERFAMILY SSF50447 205 303 1.12E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 SUPERFAMILY SSF52540 5 221 6.18E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 SUPERFAMILY SSF50465 304 396 2.16E-35 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.2E-228 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 5.6E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.7E-59 T 23-04-2016 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.4E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Gene3D G3DSA:2.40.30.10 302 395 8.8E-46 T 23-04-2016 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 4.1E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 Gene3D G3DSA:2.40.30.10 214 299 1.6E-35 T 23-04-2016 MSIP34_RS01505 dc0076b22ae9ffffa30aa37468cfc613 396 PANTHER PTHR23115:SF151 1 395 1.7E-264 T 23-04-2016 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Gene3D G3DSA:3.40.50.300 5 213 3.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.035 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PANTHER PTHR23115 1 395 1.7E-264 T 23-04-2016 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 SUPERFAMILY SSF50447 205 303 1.12E-29 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 SUPERFAMILY SSF52540 5 221 6.18E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 SUPERFAMILY SSF50465 304 396 2.16E-35 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.2E-228 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 5.6E-15 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 5.7E-59 T 23-04-2016 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.4E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Gene3D G3DSA:2.40.30.10 302 395 8.8E-46 T 23-04-2016 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 4.1E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 Gene3D G3DSA:2.40.30.10 214 299 1.6E-35 T 23-04-2016 MSIP34_RS01570 dc0076b22ae9ffffa30aa37468cfc613 396 PANTHER PTHR23115:SF151 1 395 1.7E-264 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Gene3D G3DSA:1.10.3850.10 282 499 6.8E-64 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Gene3D G3DSA:1.10.3850.10 808 1020 4.6E-57 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82693 802 851 5.49E-20 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82693 666 715 5.49E-20 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Gene3D G3DSA:3.30.70.1430 38 139 3.0E-30 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Gene3D G3DSA:3.30.70.1430 564 665 2.8E-24 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82693 275 331 4.01E-30 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82693 135 182 4.01E-30 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Gene3D G3DSA:3.30.2090.10 182 274 1.8E-26 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 6.8E-101 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82866 297 498 2.49E-54 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82714 716 800 5.62E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1033 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PANTHER PTHR32063 1 1035 0.0 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 PANTHER PTHR32063:SF11 1 1035 0.0 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82693 562 665 1.31E-23 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Gene3D G3DSA:3.30.2090.10 716 798 1.0E-23 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82693 38 132 3.4E-25 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82866 825 1020 9.02E-46 T 23-04-2016 MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 SUPERFAMILY SSF82714 183 273 2.49E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS08595 3cb876f039e291e7621c526cf7fb6e71 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1019 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 Gene3D G3DSA:1.10.287.130 226 298 5.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 452 1.8E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 SMART SM00387 343 455 3.3E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PANTHER PTHR24423 213 452 1.3E-88 T 23-04-2016 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PANTHER PTHR24423 1 15 1.3E-88 T 23-04-2016 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PANTHER PTHR24423 121 157 1.3E-88 T 23-04-2016 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 Pfam PF05227 CHASE3 domain 39 176 2.9E-31 T 23-04-2016 IPR007891 CHASE3 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 300 4.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 SMART SM00388 234 302 2.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 6.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 6.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 6.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 SUPERFAMILY SSF55874 291 453 1.57E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PANTHER PTHR24423:SF383 213 452 1.3E-88 T 23-04-2016 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PANTHER PTHR24423:SF383 1 15 1.3E-88 T 23-04-2016 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 PANTHER PTHR24423:SF383 121 157 1.3E-88 T 23-04-2016 MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 Gene3D G3DSA:3.30.565.10 301 456 4.5E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11105 abd54b3862809c7158e00b718c2b69ae 459 SUPERFAMILY SSF47384 224 301 9.42E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Gene3D G3DSA:2.40.170.20 582 714 8.1E-101 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Gene3D G3DSA:2.40.170.20 852 1133 8.1E-101 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Gene3D G3DSA:2.40.170.20 226 361 8.1E-101 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Gene3D G3DSA:2.40.170.20 769 814 8.1E-101 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Pfam PF07660 Secretin and TonB N terminus short domain 19 66 1.4E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 592 638 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 775 816 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 1116 1133 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 969 1011 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 670 709 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 98 362 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 852 941 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SUPERFAMILY SSF56935 1040 1083 3.89E-77 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 PANTHER PTHR32552 1040 1095 7.3E-24 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 PANTHER PTHR32552 598 716 7.3E-24 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 PANTHER PTHR32552 852 1008 7.3E-24 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 PANTHER PTHR32552 71 369 7.3E-24 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 PANTHER PTHR32552 1114 1133 7.3E-24 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 PANTHER PTHR32552 764 816 7.3E-24 T 23-04-2016 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Pfam PF07715 TonB-dependent Receptor Plug Domain 102 215 9.6E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Pfam PF00593 TonB dependent receptor 782 1131 1.3E-23 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 Gene3D G3DSA:2.170.130.10 71 225 1.7E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS10905 56504dde6e6368d0f6da1ea0189d9bed 1137 SMART SM00965 19 69 1.3E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 Pfam PF02743 Cache domain 59 305 3.2E-20 T 23-04-2016 IPR033479 Double Cache domain 1 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 Gene3D G3DSA:3.30.450.20 178 321 1.5E-18 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 775 961 6.5E-63 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 PANTHER PTHR32089 309 378 6.7E-147 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 PANTHER PTHR32089 697 965 6.7E-147 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 PANTHER PTHR32089:SF63 309 378 6.7E-147 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 PANTHER PTHR32089:SF63 697 965 6.7E-147 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 Pfam PF00672 HAMP domain 325 392 2.2E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 SMART SM00304 344 396 5.3E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 SMART SM00304 616 668 23.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 SMART SM00304 525 577 0.52 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 Gene3D G3DSA:1.10.287.950 736 934 5.0E-61 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 SMART SM00283 715 962 1.6E-96 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 SUPERFAMILY SSF58104 735 963 1.23E-67 T 23-04-2016 MSIP34_RS07995 1b844de24c0028a94bf0fa889960295e 1011 SUPERFAMILY SSF58104 365 398 1.23E-67 T 23-04-2016 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 PIRSF PIRSF005901 1 185 1.4E-55 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Pfam PF09285 Elongation factor P, C-terminal 128 183 2.8E-22 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 SUPERFAMILY SSF50104 1 63 4.11E-16 T 23-04-2016 IPR008991 Translation protein SH3-like domain MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 184 2.9E-64 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.2E-18 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Gene3D G3DSA:2.40.50.140 128 184 2.4E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 1.5E-18 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 SMART SM00841 128 183 2.0E-26 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 SUPERFAMILY SSF50249 65 125 1.16E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 ProSitePatterns PS01275 Elongation factor P signature. 149 168 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 SMART SM01185 67 120 3.1E-21 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 PANTHER PTHR30053 1 185 1.2E-67 T 23-04-2016 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Hamap MF_00141 Elongation factor P [efp]. 1 184 47.396 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Gene3D G3DSA:2.40.50.140 65 126 3.7E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 Gene3D G3DSA:2.30.30.30 1 62 5.5E-19 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 MSIP34_RS06290 0a4bd1ec585b5b39a7a538a95350abeb 185 SUPERFAMILY SSF50249 128 184 1.3E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS14710 8c409024444e8231b8574e1ede8035e8 851 PANTHER PTHR10108 697 851 2.6E-14 T 23-04-2016 MSIP34_RS14710 8c409024444e8231b8574e1ede8035e8 851 Pfam PF13847 Methyltransferase domain 700 810 6.1E-13 T 23-04-2016 IPR025714 Methyltransferase domain MSIP34_RS14710 8c409024444e8231b8574e1ede8035e8 851 SUPERFAMILY SSF53335 689 814 1.03E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS14710 8c409024444e8231b8574e1ede8035e8 851 Gene3D G3DSA:2.160.10.10 451 617 1.8E-20 T 23-04-2016 MSIP34_RS14710 8c409024444e8231b8574e1ede8035e8 851 Gene3D G3DSA:3.40.50.150 694 806 4.2E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS14710 8c409024444e8231b8574e1ede8035e8 851 SUPERFAMILY SSF51161 453 615 4.19E-16 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Gene3D G3DSA:3.40.120.10 283 401 1.7E-44 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Gene3D G3DSA:3.40.120.10 2 195 6.8E-63 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 PANTHER PTHR22573:SF2 1 540 4.2E-276 T 23-04-2016 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 PANTHER PTHR22573 1 540 4.2E-276 T 23-04-2016 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 SUPERFAMILY SSF53738 278 414 5.49E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Gene3D G3DSA:3.30.310.50 402 543 1.7E-61 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 466 514 9.0E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 254 4.2E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 106 120 4.2E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 205 224 4.2E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 270 285 4.2E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 14 153 2.9E-35 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 295 407 8.6E-31 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 286 4.0E-12 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 SUPERFAMILY SSF53738 2 212 4.12E-49 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 SUPERFAMILY SSF55957 409 543 8.76E-48 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 Gene3D G3DSA:3.40.120.10 196 282 1.5E-37 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04200 dcd2a884eff6c5eba5fe03a1203ad23d 543 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 107 116 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 214 7.4E-67 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 PANTHER PTHR11934 3 218 3.1E-124 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 SUPERFAMILY SSF100950 3 147 1.99E-43 T 23-04-2016 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 Gene3D G3DSA:3.30.70.260 141 195 5.3E-28 T 23-04-2016 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 4 216 32.112 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 212 1.5E-57 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 Gene3D G3DSA:3.40.50.1360 5 140 3.9E-56 T 23-04-2016 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 PANTHER PTHR11934:SF11 3 218 3.1E-124 T 23-04-2016 MSIP34_RS00870 f239ada29c638f77fba8fd55390cd013 218 SUPERFAMILY SSF75445 126 197 1.44E-21 T 23-04-2016 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 PANTHER PTHR30389:SF1 1 507 1.4E-280 T 23-04-2016 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 Pfam PF05683 Fumarase C-terminus 288 490 5.4E-79 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 284 3.6E-94 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 Gene3D G3DSA:3.20.130.10 302 489 1.1E-67 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 13 282 3.3E-61 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 PIRSF PIRSF001394 1 506 3.3E-200 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 3.5E-44 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 PANTHER PTHR30389 1 507 1.4E-280 T 23-04-2016 MSIP34_RS04245 8020e0324d1e2533b29fef3bd12b6039 507 SUPERFAMILY SSF117457 316 489 2.48E-58 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 MSIP34_RS01835 3ea23978e3d7c66ec0b5d9dab8a848da 429 SUPERFAMILY SSF53850 61 296 8.25E-30 T 23-04-2016 MSIP34_RS01835 3ea23978e3d7c66ec0b5d9dab8a848da 429 Pfam PF13379 NMT1-like family 55 304 8.1E-106 T 23-04-2016 MSIP34_RS01835 3ea23978e3d7c66ec0b5d9dab8a848da 429 Gene3D G3DSA:3.40.190.10 183 282 1.1E-5 T 23-04-2016 MSIP34_RS01835 3ea23978e3d7c66ec0b5d9dab8a848da 429 PANTHER PTHR30024 22 428 3.7E-139 T 23-04-2016 MSIP34_RS01835 3ea23978e3d7c66ec0b5d9dab8a848da 429 PANTHER PTHR30024:SF7 22 428 3.7E-139 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.62E-6 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 178 193 1.62E-6 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 Gene3D G3DSA:3.30.70.20 493 533 4.2E-4 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 SUPERFAMILY SSF54862 450 549 1.22E-27 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 546 4.7E-49 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 SUPERFAMILY SSF54373 210 306 3.92E-36 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 SUPERFAMILY SSF51905 306 448 1.95E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 SUPERFAMILY SSF51905 5 209 1.95E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 Gene3D G3DSA:3.50.50.60 307 447 9.9E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 Gene3D G3DSA:3.50.50.60 8 50 9.9E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 Gene3D G3DSA:3.50.50.60 116 221 9.9E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 PANTHER PTHR10617:SF107 1 473 8.5E-256 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.4E-6 T 23-04-2016 MSIP34_RS09770 f5f115123369a9e29d61fdb196d3aace 549 PANTHER PTHR10617 1 473 8.5E-256 T 23-04-2016 MSIP34_RS11130 9097832dc7f477ab7ffd4f5b314a428a 274 Pfam PF04305 Protein of unknown function (DUF455) 15 265 5.5E-96 T 23-04-2016 IPR007402 Protein of unknown function DUF455 MSIP34_RS11130 9097832dc7f477ab7ffd4f5b314a428a 274 PANTHER PTHR21496 4 274 5.5E-84 T 23-04-2016 MSIP34_RS11130 9097832dc7f477ab7ffd4f5b314a428a 274 PANTHER PTHR21496:SF10 4 274 5.5E-84 T 23-04-2016 MSIP34_RS11130 9097832dc7f477ab7ffd4f5b314a428a 274 PIRSF PIRSF012318 1 274 1.5E-97 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 MSIP34_RS11130 9097832dc7f477ab7ffd4f5b314a428a 274 SUPERFAMILY SSF47240 81 248 8.12E-18 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 Gene3D G3DSA:2.40.30.10 4 33 2.5E-10 T 23-04-2016 MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 Gene3D G3DSA:2.40.30.10 161 211 2.5E-10 T 23-04-2016 MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.874 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 SUPERFAMILY SSF50447 2 211 9.71E-76 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 PANTHER PTHR11229 4 214 2.2E-106 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 Pfam PF00297 Ribosomal protein L3 68 185 8.9E-15 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 3.8E-85 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01580 a7cd17c630ccdc7f4c1fc6da7dbd40b4 214 Gene3D G3DSA:4.10.960.10 89 160 4.6E-28 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:3.30.1360.40 802 882 2.3E-29 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 9.5E-47 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF50891 626 751 1.33E-32 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Pfam PF00364 Biotin-requiring enzyme 1146 1205 2.0E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 5.3E-64 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 2.5E-34 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:2.40.50.100 1135 1205 2.0E-23 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF50891 924 1055 7.21E-26 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 PANTHER PTHR18866 1103 1205 1.6E-292 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 PANTHER PTHR18866 1 540 1.6E-292 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:3.30.1490.20 129 201 4.5E-24 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF160467 802 893 1.57E-21 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Pfam PF02682 Allophanate hydrolase subunit 1 801 1026 2.4E-49 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SMART SM00878 336 440 1.3E-48 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF52440 1 112 1.01E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 448 769 7.8E-95 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 2 1205 0.0 T 23-04-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703|UniPathway: UPA00258|UniPathway: UPA00258 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:3.30.470.20 203 440 3.9E-90 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:2.40.100.10 925 1062 5.6E-45 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:2.40.100.10 626 757 5.2E-34 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Gene3D G3DSA:3.40.50.20 1 128 3.0E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SMART SM00796 800 1039 1.4E-112 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF56059 83 348 5.83E-67 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 Pfam PF02626 Allophanate hydrolase subunit 2 472 745 2.7E-89 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF51246 330 442 1.36E-35 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SMART SM00797 471 762 1.2E-168 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 PANTHER PTHR18866:SF91 1103 1205 1.6E-292 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 PANTHER PTHR18866:SF91 1 540 1.6E-292 T 23-04-2016 MSIP34_RS04850 d44a11fc46bba3018a670a9816c880df 1208 SUPERFAMILY SSF51230 1128 1205 9.95E-21 T 23-04-2016 IPR011053 Single hybrid motif MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 8 210 38.2 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 Gene3D G3DSA:3.90.870.10 6 218 4.2E-100 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 Pfam PF00925 GTP cyclohydrolase II 215 365 7.0E-38 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 206 2.4E-74 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 PANTHER PTHR21327 1 363 5.8E-149 T 23-04-2016 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 PIRSF PIRSF001259 9 369 1.9E-125 T 23-04-2016 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 PANTHER PTHR21327:SF6 1 363 5.8E-149 T 23-04-2016 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 15 205 1.0E-83 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 SUPERFAMILY SSF142695 211 367 8.24E-47 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS03200 3e93865543096fe763276a1b9d921715 371 SUPERFAMILY SSF55821 8 210 1.17E-86 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 SUPERFAMILY SSF53850 101 309 1.99E-43 T 23-04-2016 MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 Gene3D G3DSA:1.10.10.10 14 94 1.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 SUPERFAMILY SSF46785 14 123 1.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 Gene3D G3DSA:3.40.190.10 102 178 9.1E-8 T 23-04-2016 MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 Pfam PF03466 LysR substrate binding domain 100 305 1.6E-41 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 PANTHER PTHR30537:SF21 7 318 3.2E-137 T 23-04-2016 MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 4.8E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 Gene3D G3DSA:3.40.190.10 179 273 2.4E-19 T 23-04-2016 MSIP34_RS13535 8d136e2d02143fd1d5d962a5c9dc5ce4 318 PANTHER PTHR30537 7 318 3.2E-137 T 23-04-2016 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 7 270 3.5E-131 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 Gene3D G3DSA:1.10.3720.10 18 267 9.2E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 SUPERFAMILY SSF161098 13 262 2.62E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 270 5.3E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 PANTHER PTHR30406:SF6 2 275 1.6E-166 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 PANTHER PTHR30406 2 275 1.6E-166 T 23-04-2016 MSIP34_RS10845 e9a05cdc46a61d01db51a5b88093fdd9 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 4 266 5.8E-100 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 MSIP34_RS06530 ce61781c58d9e69ec50b87da29291445 332 Gene3D G3DSA:3.90.550.10 9 131 5.3E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06530 ce61781c58d9e69ec50b87da29291445 332 Pfam PF00535 Glycosyl transferase family 2 13 174 1.4E-33 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS06530 ce61781c58d9e69ec50b87da29291445 332 PANTHER PTHR10859 8 326 7.9E-127 T 23-04-2016 MSIP34_RS06530 ce61781c58d9e69ec50b87da29291445 332 SUPERFAMILY SSF53448 9 215 8.13E-42 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06530 ce61781c58d9e69ec50b87da29291445 332 PANTHER PTHR10859:SF86 8 326 7.9E-127 T 23-04-2016 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 137 1.4E-37 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Gene3D G3DSA:3.40.120.10 168 245 1.4E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 PANTHER PTHR22573:SF28 6 456 5.4E-186 T 23-04-2016 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 254 361 2.4E-20 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 SUPERFAMILY SSF55957 362 456 8.37E-21 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 SUPERFAMILY SSF53738 254 352 5.89E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 383 445 5.1E-13 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Gene3D G3DSA:3.40.120.10 6 143 2.4E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 152 249 2.9E-23 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 200 213 1.3E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.3E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 166 185 1.3E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 229 244 1.3E-23 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 PANTHER PTHR22573 6 456 5.4E-186 T 23-04-2016 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 SUPERFAMILY SSF53738 5 136 1.65E-40 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Gene3D G3DSA:3.40.120.10 247 361 1.0E-42 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 Gene3D G3DSA:3.30.310.50 365 453 1.7E-27 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 SUPERFAMILY SSF53738 150 251 2.9E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS04225 57d5a5ae9ac96cead105a9f9ebb815ef 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 SUPERFAMILY SSF52821 103 238 2.47E-32 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 Gene3D G3DSA:3.40.250.10 117 239 8.1E-43 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 PANTHER PTHR22778:SF12 16 303 8.0E-123 T 23-04-2016 MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 Pfam PF00581 Rhodanese-like domain 129 223 3.6E-9 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 Hamap MF_00469 UPF0176 protein YceA [yceA]. 15 267 46.758 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 SMART SM00450 126 227 1.2E-23 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS11825 36fda70b4a2023e20353cc618d227f9f 332 PANTHER PTHR22778 16 303 8.0E-123 T 23-04-2016 MSIP34_RS09390 3eca7ae4cc074b96db33d2b1f7ea2ddf 190 Pfam PF04519 Polymer-forming cytoskeletal 72 167 4.8E-18 T 23-04-2016 IPR007607 Protein of unknown function DUF583 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 519 51.898 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PRINTS PR00315 GTP-binding elongation factor signature 133 142 1.8E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PRINTS PR00315 GTP-binding elongation factor signature 81 91 1.8E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PRINTS PR00315 GTP-binding elongation factor signature 97 108 1.8E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PRINTS PR00315 GTP-binding elongation factor signature 61 69 1.8E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 Gene3D G3DSA:3.30.70.870 388 457 4.1E-14 T 23-04-2016 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 520 1.3E-238 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 144 8.5E-20 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 Pfam PF16658 Class II release factor RF3, C-terminal domain 380 506 8.9E-45 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 Gene3D G3DSA:3.40.50.300 3 275 4.0E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 Pfam PF00009 Elongation factor Tu GTP binding domain 8 270 3.0E-51 T 23-04-2016 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 SUPERFAMILY SSF52540 5 271 4.41E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 Gene3D G3DSA:2.40.30.10 286 387 1.4E-23 T 23-04-2016 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 SUPERFAMILY SSF50447 254 386 9.5E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 SUPERFAMILY SSF54980 386 457 2.41E-17 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PANTHER PTHR23115 244 458 2.9E-235 T 23-04-2016 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PANTHER PTHR23115 3 180 2.9E-235 T 23-04-2016 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PANTHER PTHR23115:SF69 244 458 2.9E-235 T 23-04-2016 MSIP34_RS08060 bb4777af32fd6df05b417701555b24af 522 PANTHER PTHR23115:SF69 3 180 2.9E-235 T 23-04-2016 MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 PANTHER PTHR33741 1 281 1.5E-32 T 23-04-2016 MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 SMART SM00116 333 381 8.0E-8 T 23-04-2016 IPR000644 CBS domain MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 SMART SM00116 249 297 1.3E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 Pfam PF04982 HPP family 53 173 7.2E-39 T 23-04-2016 IPR007065 HPP MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 Gene3D G3DSA:3.20.20.70 240 380 3.7E-28 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 SUPERFAMILY SSF54631 230 381 1.35E-34 T 23-04-2016 MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 Gene3D G3DSA:1.20.1250.20 31 171 6.4E-5 T 23-04-2016 MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 Pfam PF00571 CBS domain 326 378 7.5E-12 T 23-04-2016 IPR000644 CBS domain MSIP34_RS11125 f3421e96f50c5c1c1da64282d2a4953b 391 Pfam PF00571 CBS domain 244 294 2.4E-9 T 23-04-2016 IPR000644 CBS domain MSIP34_RS04860 5a23987560a70015241caef996b5abe0 135 Gene3D G3DSA:3.10.490.10 4 75 7.6E-4 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like MSIP34_RS04860 5a23987560a70015241caef996b5abe0 135 PANTHER PTHR18866:SF91 41 129 2.9E-18 T 23-04-2016 MSIP34_RS04860 5a23987560a70015241caef996b5abe0 135 PANTHER PTHR18866 41 129 2.9E-18 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 Pfam PF00344 SecY translocase 73 411 1.0E-117 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 Hamap MF_01465 Protein translocase subunit SecY [secY]. 7 427 30.213 T 23-04-2016 IPR026593 Protein translocase subunit SecY MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 ProSitePatterns PS00756 Protein secY signature 2. 167 184 - T 23-04-2016 IPR030659 SecY conserved site MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 17 423 1.7E-132 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 ProSitePatterns PS00755 Protein secY signature 1. 73 92 - T 23-04-2016 IPR030659 SecY conserved site MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PANTHER PTHR10906:SF2 12 440 1.1E-224 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 Gene3D G3DSA:1.10.3370.10 11 431 6.2E-167 T 23-04-2016 IPR023201 SecY subunit domain MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 SUPERFAMILY SSF103491 11 418 9.15E-134 T 23-04-2016 IPR023201 SecY subunit domain MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PANTHER PTHR10906 12 440 1.1E-224 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 364 382 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 396 414 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 20 38 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PRINTS PR00303 Preprotein translocase SecY subunit signature 309 331 3.3E-94 T 23-04-2016 MSIP34_RS01680 6a9e7d4e2c669b9399d080f900e0d45c 440 PIRSF PIRSF004557 4 434 1.8E-122 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 PANTHER PTHR14021 3 173 1.6E-49 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 18 175 5.1E-33 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 PANTHER PTHR14021:SF15 3 173 1.6E-49 T 23-04-2016 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 Pfam PF07743 HSCB C-terminal oligomerisation domain 92 168 5.7E-19 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 SMART SM00271 6 71 3.5E-6 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 Gene3D G3DSA:1.20.1280.20 86 175 2.5E-25 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 SUPERFAMILY SSF46565 7 79 1.96E-16 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 Gene3D G3DSA:1.10.287.110 3 78 1.6E-27 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 6 176 23.726 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 MSIP34_RS09365 04c39fc1f1dbe8b72d1d20894c112107 177 SUPERFAMILY SSF47144 84 175 1.09E-20 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 MSIP34_RS13315 f5ea1387fd9912c4a14d2eb1a355dfa2 105 SMART SM00749 41 104 8.7E-11 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS13315 f5ea1387fd9912c4a14d2eb1a355dfa2 105 PANTHER PTHR34606 1 103 2.5E-40 T 23-04-2016 MSIP34_RS13315 f5ea1387fd9912c4a14d2eb1a355dfa2 105 Pfam PF04972 BON domain 36 103 9.6E-22 T 23-04-2016 IPR007055 BON domain MSIP34_RS13315 f5ea1387fd9912c4a14d2eb1a355dfa2 105 PANTHER PTHR34606:SF1 1 103 2.5E-40 T 23-04-2016 MSIP34_RS03990 026d7ee808a790c7fdd40b6f0b6b73f7 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 39 92 8.0E-14 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal MSIP34_RS03990 026d7ee808a790c7fdd40b6f0b6b73f7 103 SUPERFAMILY SSF101498 1 94 1.09E-15 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 MSIP34_RS03990 026d7ee808a790c7fdd40b6f0b6b73f7 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 95 2.5E-23 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SUPERFAMILY SSF52172 1 164 2.13E-24 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SUPERFAMILY SSF55785 127 250 6.28E-19 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Gene3D G3DSA:3.30.450.20 272 377 9.7E-30 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SUPERFAMILY SSF55073 394 552 1.8E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Gene3D G3DSA:3.20.20.450 563 813 1.6E-98 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Gene3D G3DSA:3.30.450.20 132 252 3.6E-19 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Pfam PF00072 Response regulator receiver domain 4 114 1.8E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799:SF710 217 394 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799:SF710 779 798 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799:SF710 422 640 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799:SF710 18 34 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SUPERFAMILY SSF141868 565 813 1.44E-92 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Pfam PF08448 PAS fold 147 253 5.3E-16 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Gene3D G3DSA:3.40.50.2300 1 131 4.0E-21 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Gene3D G3DSA:3.30.70.270 391 557 1.0E-60 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799 217 394 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799 779 798 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799 422 640 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 PANTHER PTHR10799 18 34 8.7E-75 T 23-04-2016 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00086 211 252 42.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00086 335 378 3.9E-9 T 23-04-2016 IPR001610 PAC motif MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00052 560 806 5.7E-127 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 385 7.3E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 259 1.2E-10 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SUPERFAMILY SSF55785 249 376 5.15E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Pfam PF00563 EAL domain 566 801 2.2E-72 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Pfam PF13426 PAS domain 279 377 1.2E-16 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 Pfam PF00990 Diguanylate cyclase, GGDEF domain 389 546 3.8E-50 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 385 548 1.8E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00448 2 114 2.6E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00267 378 550 6.7E-66 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00091 139 205 1.7E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11115 4b13a40a3fdea796ef1368c78a778424 821 SMART SM00091 260 329 1.4E-4 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 PANTHER PTHR20857 7 205 2.7E-53 T 23-04-2016 MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 7 197 4.0E-53 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 PANTHER PTHR20857:SF15 7 205 2.7E-53 T 23-04-2016 MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 5 203 24.209 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 SUPERFAMILY SSF51391 5 202 2.09E-58 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 Gene3D G3DSA:3.20.20.70 6 203 5.0E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS14040 7523e2a6f97f85158bdda53b6f0835cf 208 Pfam PF02581 Thiamine monophosphate synthase/TENI 7 184 2.5E-51 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 696 7.8E-77 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 159 6.5E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 SUPERFAMILY SSF56935 17 697 1.55E-120 T 23-04-2016 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 PANTHER PTHR32552:SF19 49 698 1.6E-85 T 23-04-2016 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 Gene3D G3DSA:2.170.130.10 20 170 5.8E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 Gene3D G3DSA:2.40.170.20 176 698 6.8E-115 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 PANTHER PTHR32552 49 698 1.6E-85 T 23-04-2016 MSIP34_RS09925 0e3b57f72283dd4f431b0b9aece31520 698 Pfam PF00593 TonB dependent receptor 463 692 4.7E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 245 1.0E-44 T 23-04-2016 MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PANTHER PTHR24322 157 188 2.0E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PANTHER PTHR24322 12 141 2.0E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 8.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 8.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 8.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 8.4E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 SUPERFAMILY SSF51735 7 248 5.1E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PANTHER PTHR24322:SF211 157 188 2.0E-59 T 23-04-2016 MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 PANTHER PTHR24322:SF211 12 141 2.0E-59 T 23-04-2016 MSIP34_RS01285 45b97622a0eb529be76ede3e3f3f8170 250 Gene3D G3DSA:3.40.50.720 4 248 3.2E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 TIGRFAM TIGR03119 one_C_fhcD: formylmethanofuran--tetrahydromethanopterin N-formyltransferase 8 296 5.0E-139 T 23-04-2016 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 Gene3D G3DSA:3.30.70.520 154 297 4.4E-68 T 23-04-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 Pfam PF02741 FTR, proximal lobe 146 296 2.8E-65 T 23-04-2016 IPR002770 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal GO:0006730|GO:0016740 MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 SUPERFAMILY SSF55112 145 297 4.45E-61 T 23-04-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 Pfam PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase 1 143 1.5E-63 T 23-04-2016 IPR022667 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal GO:0006730|GO:0016740 MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 SUPERFAMILY SSF55112 1 144 3.4E-63 T 23-04-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 PIRSF PIRSF006414 1 298 4.3E-120 T 23-04-2016 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 Hamap MF_00579 Formylmethanofuran--tetrahydromethanopterin formyltransferase [ftr]. 1 297 47.414 T 23-04-2016 IPR014053 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr GO:0006730|GO:0030270 MSIP34_RS07680 2fbf1bc55ec599e940227f16e2aa23da 302 Gene3D G3DSA:3.30.70.520 18 153 9.9E-69 T 23-04-2016 IPR023447 Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like domain MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 Gene3D G3DSA:3.40.50.300 213 371 5.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 PANTHER PTHR24031:SF261 4 461 2.4E-191 T 23-04-2016 MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 Gene3D G3DSA:3.40.50.300 4 212 1.4E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 SUPERFAMILY SSF52540 74 363 1.51E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 PANTHER PTHR24031 4 461 2.4E-191 T 23-04-2016 MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 SMART SM00490 260 341 1.6E-33 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 SMART SM00487 22 223 5.9E-60 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 Pfam PF00270 DEAD/DEAH box helicase 27 191 3.2E-48 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 Pfam PF00271 Helicase conserved C-terminal domain 242 341 6.3E-28 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS08805 364e881bf0d80d634fb9fc7c2c84266d 468 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 Pfam PF00813 FliP family 61 253 3.7E-80 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 186 201 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PANTHER PTHR30587:SF0 23 258 6.7E-124 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 129 143 3.4E-32 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 157 169 3.4E-32 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 117 129 3.4E-32 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 57 66 3.4E-32 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 179 191 3.4E-32 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 247 257 3.4E-32 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 234 246 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 61 257 1.2E-91 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 231 256 1.6E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 207 228 1.6E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 59 78 1.6E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 78 98 1.6E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 98 117 1.6E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 186 206 1.6E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 MSIP34_RS03915 a040129e43de322a1201964fb49f9d97 258 PANTHER PTHR30587 23 258 6.7E-124 T 23-04-2016 MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 430 588 1.1E-38 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 PANTHER PTHR10799:SF750 6 82 1.1E-20 T 23-04-2016 MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 PANTHER PTHR10799:SF750 462 594 1.1E-20 T 23-04-2016 MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 590 1.5E-44 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 SUPERFAMILY SSF55073 434 593 1.88E-43 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 SMART SM00267 418 592 2.5E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 PANTHER PTHR10799 6 82 1.1E-20 T 23-04-2016 MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 PANTHER PTHR10799 462 594 1.1E-20 T 23-04-2016 MSIP34_RS13410 5f370b1ffea89b1e19638223f19ab9ce 606 Gene3D G3DSA:3.30.70.270 431 595 8.3E-44 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:3.30.56.20 399 472 2.5E-24 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Pfam PF01588 Putative tRNA binding domain 45 144 4.4E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SMART SM00874 400 468 1.7E-26 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:3.30.70.380 692 783 6.5E-29 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:3.30.56.10 1 38 7.9E-25 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:3.30.56.10 154 183 7.9E-25 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Pfam PF03483 B3/4 domain 211 384 2.6E-69 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SUPERFAMILY SSF46955 401 472 1.65E-17 T 23-04-2016 IPR009061 Putative DNA-binding domain MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Pfam PF03484 tRNA synthetase B5 domain 403 468 6.5E-19 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SUPERFAMILY SSF50249 37 192 1.22E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:2.40.50.140 41 153 2.8E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 PANTHER PTHR10947:SF0 2 783 1.6E-280 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 PANTHER PTHR10947 2 783 1.6E-280 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SUPERFAMILY SSF56037 197 395 2.88E-74 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:3.30.930.10 492 679 7.0E-59 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Gene3D G3DSA:3.50.40.10 199 391 1.1E-81 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SUPERFAMILY SSF54991 685 783 9.29E-28 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SMART SM00896 690 783 3.4E-40 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SMART SM00873 211 384 3.8E-93 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Pfam PF03147 Ferredoxin-fold anticodon binding domain 691 783 7.0E-28 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 SUPERFAMILY SSF55681 464 679 1.54E-46 T 23-04-2016 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 777 44.002 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS03695 61517ba6b4bb9758ed394eeb98e26600 784 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 783 2.3E-248 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS10555 a88f212d69f81d32c1a74cf8b6af779e 544 Gene3D G3DSA:3.40.720.10 352 508 2.3E-15 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS10555 a88f212d69f81d32c1a74cf8b6af779e 544 PANTHER PTHR30443:SF0 9 506 3.0E-172 T 23-04-2016 MSIP34_RS10555 a88f212d69f81d32c1a74cf8b6af779e 544 PANTHER PTHR30443 9 506 3.0E-172 T 23-04-2016 MSIP34_RS10555 a88f212d69f81d32c1a74cf8b6af779e 544 Pfam PF00884 Sulfatase 227 506 8.6E-42 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 MSIP34_RS10555 a88f212d69f81d32c1a74cf8b6af779e 544 SUPERFAMILY SSF53649 310 506 3.92E-20 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS10555 a88f212d69f81d32c1a74cf8b6af779e 544 Pfam PF08019 Domain of unknown function (DUF1705) 50 199 1.3E-40 T 23-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 MSIP34_RS06515 a09ed91a4eb819d07b6bae9362fffb34 548 PANTHER PTHR16631 46 323 4.5E-75 T 23-04-2016 MSIP34_RS06515 a09ed91a4eb819d07b6bae9362fffb34 548 SUPERFAMILY SSF51445 26 314 1.7E-50 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS06515 a09ed91a4eb819d07b6bae9362fffb34 548 PANTHER PTHR16631:SF5 46 323 4.5E-75 T 23-04-2016 MSIP34_RS06515 a09ed91a4eb819d07b6bae9362fffb34 548 Gene3D G3DSA:3.20.20.80 65 314 4.5E-29 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 PANTHER PTHR24078:SF231 1 366 4.7E-164 T 23-04-2016 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.633 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Gene3D G3DSA:2.60.260.20 212 252 1.4E-22 T 23-04-2016 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Gene3D G3DSA:2.60.260.20 255 332 9.6E-22 T 23-04-2016 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Gene3D G3DSA:2.60.260.20 114 142 1.4E-22 T 23-04-2016 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Pfam PF00226 DnaJ domain 5 67 2.8E-29 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 348 2.3E-141 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 PANTHER PTHR24078 1 366 4.7E-164 T 23-04-2016 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 SUPERFAMILY SSF46565 1 106 2.36E-37 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 SUPERFAMILY SSF49493 258 343 3.14E-22 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 SMART SM00271 4 62 1.2E-32 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 PRINTS PR00625 DnaJ domain signature 62 81 2.7E-33 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 PRINTS PR00625 DnaJ domain signature 25 40 2.7E-33 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 PRINTS PR00625 DnaJ domain signature 42 62 2.7E-33 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 PRINTS PR00625 DnaJ domain signature 7 25 2.7E-33 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 SUPERFAMILY SSF49493 213 256 3.27E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 SUPERFAMILY SSF49493 114 154 3.27E-20 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Pfam PF01556 DnaJ C terminal domain 120 332 1.0E-43 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Pfam PF00684 DnaJ central domain 146 206 1.2E-14 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Gene3D G3DSA:2.10.230.10 143 210 9.1E-25 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 SUPERFAMILY SSF57938 133 210 1.44E-22 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 MSIP34_RS09650 b30d65eb97a8e6f363cecf82064611f2 373 Gene3D G3DSA:1.10.287.110 1 105 1.4E-38 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS13615 c5930aba6dd86efd065500fdf4b923e4 329 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 264 3.3E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13615 c5930aba6dd86efd065500fdf4b923e4 329 PANTHER PTHR24422:SF10 66 219 8.2E-18 T 23-04-2016 MSIP34_RS13615 c5930aba6dd86efd065500fdf4b923e4 329 SMART SM00283 40 287 6.0E-5 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13615 c5930aba6dd86efd065500fdf4b923e4 329 SUPERFAMILY SSF58104 41 281 1.19E-36 T 23-04-2016 MSIP34_RS13615 c5930aba6dd86efd065500fdf4b923e4 329 PANTHER PTHR24422 66 219 8.2E-18 T 23-04-2016 MSIP34_RS13615 c5930aba6dd86efd065500fdf4b923e4 329 Gene3D G3DSA:1.10.287.950 50 251 8.4E-31 T 23-04-2016 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 SUPERFAMILY SSF53681 116 269 3.92E-35 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 Pfam PF01177 Asp/Glu/Hydantoin racemase 14 222 3.6E-37 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 PANTHER PTHR21198:SF2 7 273 8.7E-93 T 23-04-2016 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 TIGRFAM TIGR00067 glut_race: glutamate racemase 14 241 3.8E-65 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 Hamap MF_00258 Glutamate racemase [murI]. 12 265 36.01 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 78 86 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 187 197 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 SUPERFAMILY SSF53681 13 114 1.63E-32 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 Gene3D G3DSA:3.40.50.1860 11 180 4.6E-55 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS10785 a9f0c9375b971d8bf7dc605066c059e5 273 PANTHER PTHR21198 7 273 8.7E-93 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF47226 1041 1147 1.7E-18 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF47226 8 130 1.07E-15 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:3.40.50.2300 1637 1756 2.8E-38 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:3.30.565.10 1298 1482 2.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF50341 1482 1614 2.62E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM01231 1160 1297 2.6E-8 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1443 1461 1.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1467 1480 1.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1427 1437 1.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1387 1401 1.7E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:1.20.120.160 440 530 4.1E-4 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:1.20.120.160 748 847 4.5E-15 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM00073 616 720 0.006 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM00073 761 853 1.4E-6 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM00073 1040 1135 5.5E-5 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1346 1482 1.1E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PANTHER PTHR22617:SF6 57 153 1.5E-106 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PANTHER PTHR22617:SF6 853 1077 1.5E-106 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF47226 616 735 6.8E-22 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF47226 439 556 1.65E-6 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Pfam PF01584 CheW-like domain 1487 1617 1.3E-20 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM00448 1638 1751 2.3E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF52172 1638 1756 2.13E-36 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Pfam PF01627 Hpt domain 764 854 1.3E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Pfam PF01627 Hpt domain 1043 1138 2.1E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Pfam PF01627 Hpt domain 618 704 1.5E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PANTHER PTHR22617 1275 1631 1.5E-106 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PANTHER PTHR22617:SF6 1275 1631 1.5E-106 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:1.20.120.160 615 744 7.3E-22 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:1.20.120.160 15 136 2.8E-14 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:1.20.120.160 1041 1147 1.6E-20 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PANTHER PTHR22617 57 153 1.5E-106 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 PANTHER PTHR22617 853 1077 1.5E-106 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF55874 1299 1480 1.7E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SUPERFAMILY SSF47226 752 854 1.57E-12 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM00260 1475 1615 6.2E-19 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:2.30.30.40 1570 1614 1.1E-17 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Gene3D G3DSA:2.30.30.40 1483 1504 1.1E-17 T 23-04-2016 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 Pfam PF00072 Response regulator receiver domain 1640 1751 2.5E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08865 4a58c24d2c3d7a275dba1c051ffd6313 1758 SMART SM00387 1342 1483 1.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06615 99d194a7eadff29d39257dc9ce213546 175 SUPERFAMILY SSF53335 5 154 6.5E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06615 99d194a7eadff29d39257dc9ce213546 175 Pfam PF13649 Methyltransferase domain 26 110 1.1E-7 T 23-04-2016 MSIP34_RS06615 99d194a7eadff29d39257dc9ce213546 175 Gene3D G3DSA:3.40.50.150 8 165 1.8E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 Gene3D G3DSA:3.20.20.70 1 293 1.9E-83 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 PANTHER PTHR12128 1 293 9.9E-43 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 1.2E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 1.2E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 101 117 1.2E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 1.2E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 SMART SM01130 1 294 1.7E-56 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 290 1.5E-33 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 SUPERFAMILY SSF51569 1 292 4.19E-60 T 23-04-2016 MSIP34_RS06800 177d19b3fd29a27307c43a158701bd75 294 PIRSF PIRSF001365 1 294 1.1E-52 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS02705 f237c6b3505cdc34323739d3fec7c8fe 382 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 364 7.3E-107 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MSIP34_RS02705 f237c6b3505cdc34323739d3fec7c8fe 382 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 382 7.9E-146 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MSIP34_RS02705 f237c6b3505cdc34323739d3fec7c8fe 382 PANTHER PTHR30365:SF6 3 382 4.8E-166 T 23-04-2016 MSIP34_RS02705 f237c6b3505cdc34323739d3fec7c8fe 382 PIRSF PIRSF000267 5 381 8.5E-125 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MSIP34_RS02705 f237c6b3505cdc34323739d3fec7c8fe 382 PANTHER PTHR30365 3 382 4.8E-166 T 23-04-2016 MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 SUPERFAMILY SSF51735 11 243 1.94E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PANTHER PTHR24322 166 199 5.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PANTHER PTHR24322 18 150 5.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PANTHER PTHR24322:SF337 166 199 5.4E-47 T 23-04-2016 MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PANTHER PTHR24322:SF337 18 150 5.4E-47 T 23-04-2016 MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 Gene3D G3DSA:3.40.50.720 10 245 1.5E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 Pfam PF00106 short chain dehydrogenase 15 210 9.0E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.9E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.9E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 1.9E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 1.9E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07235 ce6436103f4d60b3792af980aedb333a 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.9E-18 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 Gene3D G3DSA:3.60.10.10 2 253 1.2E-81 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 4.9E-80 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 253 1.2E-79 T 23-04-2016 MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 210 221 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 SUPERFAMILY SSF56219 2 253 3.53E-78 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 PANTHER PTHR22748:SF7 2 255 5.9E-107 T 23-04-2016 MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 PANTHER PTHR22748 2 255 5.9E-107 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 MSIP34_RS01015 4580e9719c8d6f8906095f20410365c4 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 246 5.4E-25 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 PANTHER PTHR30346 1 289 1.2E-95 T 23-04-2016 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 SUPERFAMILY SSF53850 88 290 3.53E-43 T 23-04-2016 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.6E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.6E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.6E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 Gene3D G3DSA:3.40.190.10 176 266 8.3E-30 T 23-04-2016 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.4E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 PANTHER PTHR30346:SF15 1 289 1.2E-95 T 23-04-2016 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 Pfam PF03466 LysR substrate binding domain 88 289 5.5E-46 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 SUPERFAMILY SSF46785 1 86 1.07E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 Gene3D G3DSA:3.40.190.10 90 175 2.1E-19 T 23-04-2016 MSIP34_RS00090 2ee11b4ff7af4812c82812c88dd24b53 302 Gene3D G3DSA:1.10.10.10 1 84 2.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Pfam PF01612 3'-5' exonuclease 322 506 2.8E-39 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SUPERFAMILY SSF56672 515 918 5.34E-159 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:3.40.50.1010 2 187 7.3E-67 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:1.10.150.20 702 807 3.6E-37 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 781 792 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 744 769 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 668 683 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 803 814 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 835 851 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 645 667 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 865 878 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 720 733 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PRINTS PR00868 DNA-polymerase family A (pol I) signature 690 713 7.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 ProSitePatterns PS00447 DNA polymerase family A signature. 744 763 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Pfam PF00476 DNA polymerase family A 540 915 1.1E-157 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SMART SM00482 676 882 9.4E-118 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:1.10.150.20 188 247 9.2E-26 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:3.30.420.10 319 532 7.4E-80 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SUPERFAMILY SSF47807 172 286 6.73E-34 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SUPERFAMILY SSF88723 1 171 4.21E-54 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SMART SM00474 321 507 5.8E-38 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:1.20.1060.10 533 653 1.3E-37 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SUPERFAMILY SSF53098 324 508 1.14E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 266 6.3E-26 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PANTHER PTHR10133 2 282 0.0 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PANTHER PTHR10133 308 917 0.0 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PANTHER PTHR10133:SF27 2 282 0.0 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 PANTHER PTHR10133:SF27 308 917 0.0 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:3.30.70.370 808 918 1.8E-66 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Gene3D G3DSA:3.30.70.370 654 701 1.8E-66 T 23-04-2016 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SMART SM00279 174 209 7.4E-13 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 SMART SM00475 1 262 2.5E-110 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 171 2.8E-50 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 MSIP34_RS01990 a94dbd86e84feb5a5b72b6339403217a 918 TIGRFAM TIGR00593 pola: DNA polymerase I 4 918 4.2E-288 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 SMART SM00419 166 214 1.3E-9 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 Gene3D G3DSA:2.60.120.10 13 153 3.5E-18 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 Gene3D G3DSA:1.10.10.10 155 222 6.6E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 SUPERFAMILY SSF51206 15 154 1.38E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 SUPERFAMILY SSF46785 155 222 1.76E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 PANTHER PTHR24567 7 222 5.0E-25 T 23-04-2016 MSIP34_RS03375 68ed0bd98c2dfa8409fe2a7e9c437b1d 223 Pfam PF13545 Crp-like helix-turn-helix domain 158 220 9.1E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS02710 38266c23f69c701f63783f81df3bc605 522 PANTHER PTHR30365 379 522 1.8E-251 T 23-04-2016 MSIP34_RS02710 38266c23f69c701f63783f81df3bc605 522 PANTHER PTHR30365 1 313 1.8E-251 T 23-04-2016 MSIP34_RS02710 38266c23f69c701f63783f81df3bc605 522 PANTHER PTHR30365:SF0 379 522 1.8E-251 T 23-04-2016 MSIP34_RS02710 38266c23f69c701f63783f81df3bc605 522 PANTHER PTHR30365:SF0 1 313 1.8E-251 T 23-04-2016 MSIP34_RS02710 38266c23f69c701f63783f81df3bc605 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 504 1.8E-176 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 Pfam PF13499 EF-hand domain pair 69 131 1.7E-7 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 Gene3D G3DSA:1.10.238.10 79 119 3.6E-8 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 Pfam PF13202 EF hand 135 152 0.019 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 SUPERFAMILY SSF47473 43 154 9.37E-16 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 Gene3D G3DSA:1.10.238.10 44 78 1.4E-6 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 Gene3D G3DSA:1.10.238.10 120 153 7.4E-6 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 SMART SM00054 107 135 0.94 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 SMART SM00054 41 69 1.4 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 ProSitePatterns PS00018 EF-hand calcium-binding domain. 116 128 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 ProSitePatterns PS00018 EF-hand calcium-binding domain. 74 86 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 ProSitePatterns PS00018 EF-hand calcium-binding domain. 50 62 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS06785 061219406783cfb9d3e4e3463f6b15c5 159 ProSitePatterns PS00018 EF-hand calcium-binding domain. 140 152 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS09620 e9f1a48320286bc401ac7dff556a67ea 261 SUPERFAMILY SSF56112 57 197 3.21E-7 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS09620 e9f1a48320286bc401ac7dff556a67ea 261 Gene3D G3DSA:1.10.510.10 82 215 1.8E-4 T 23-04-2016 MSIP34_RS09620 e9f1a48320286bc401ac7dff556a67ea 261 PIRSF PIRSF026326 3 244 1.2E-56 T 23-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA MSIP34_RS09620 e9f1a48320286bc401ac7dff556a67ea 261 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 231 1.8E-31 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 Hamap MF_00163 Peptide deformylase [def]. 2 167 26.36 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 161 1.5E-32 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PANTHER PTHR10458:SF4 1 166 1.7E-64 T 23-04-2016 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 SUPERFAMILY SSF56420 1 166 2.88E-56 T 23-04-2016 IPR023635 Peptide deformylase MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PANTHER PTHR10458 1 166 1.7E-64 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 Pfam PF01327 Polypeptide deformylase 4 159 2.0E-45 T 23-04-2016 IPR023635 Peptide deformylase MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 Gene3D G3DSA:3.90.45.10 1 162 4.2E-52 T 23-04-2016 IPR023635 Peptide deformylase MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PRINTS PR01576 Peptide deformylase signature 110 128 5.8E-27 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PRINTS PR01576 Peptide deformylase signature 129 158 5.8E-27 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PRINTS PR01576 Peptide deformylase signature 34 63 5.8E-27 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PRINTS PR01576 Peptide deformylase signature 98 109 5.8E-27 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07205 d312b8250fa053caddc2f55988050d95 177 PIRSF PIRSF004749 1 171 2.8E-48 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 450 1.4E-177 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 Gene3D G3DSA:1.10.860.10 12 114 8.1E-39 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 PANTHER PTHR30153 1 459 3.5E-207 T 23-04-2016 MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 4.8E-36 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 Pfam PF03796 DnaB-like helicase C terminal domain 192 449 1.2E-117 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 SUPERFAMILY SSF48024 10 121 2.35E-38 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 SMART SM00382 209 409 0.0012 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 SUPERFAMILY SSF52540 190 443 2.66E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07265 633108d8b7f891fcfb0ae8c82f566f2d 460 Gene3D G3DSA:3.40.50.300 185 449 4.1E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Gene3D G3DSA:3.30.300.20 278 346 1.8E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SUPERFAMILY SSF47794 353 415 9.89E-16 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Pfam PF08529 NusA N-terminal domain 4 124 5.1E-34 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 364 413 3.2E-18 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 437 486 1.1E-16 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Gene3D G3DSA:1.10.150.20 429 487 8.0E-20 T 23-04-2016 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SUPERFAMILY SSF50249 133 198 2.49E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SUPERFAMILY SSF47794 426 487 1.73E-14 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 PANTHER PTHR22648 1 445 5.1E-160 T 23-04-2016 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SUPERFAMILY SSF54814 278 341 7.19E-16 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SUPERFAMILY SSF54814 201 276 1.77E-28 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 409 29.165 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Pfam PF13184 NusA-like KH domain 229 296 9.3E-26 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 2.0E-121 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Pfam PF14520 Helix-hairpin-helix domain 429 483 1.1E-7 T 23-04-2016 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Gene3D G3DSA:2.40.50.140 136 197 6.9E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Gene3D G3DSA:3.30.300.20 199 276 7.9E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SUPERFAMILY SSF69705 1 126 1.31E-33 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Pfam PF00575 S1 RNA binding domain 134 194 8.5E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Gene3D G3DSA:3.30.1480.10 1 125 8.4E-39 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 Gene3D G3DSA:1.10.150.20 354 419 4.4E-22 T 23-04-2016 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 PANTHER PTHR22648:SF0 1 445 5.1E-160 T 23-04-2016 MSIP34_RS00370 802a998e07146d6d5ed204d2326eba22 488 SMART SM00316 133 199 1.2E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 SUPERFAMILY SSF53335 5 206 4.03E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 PANTHER PTHR31760 4 203 9.8E-65 T 23-04-2016 MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 205 4.2E-52 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 15 204 27.927 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 Gene3D G3DSA:3.40.50.150 2 206 1.4E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 PIRSF PIRSF003078 2 209 2.9E-55 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 Pfam PF02527 rRNA small subunit methyltransferase G 23 180 2.0E-53 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 MSIP34_RS14160 0bbd7d44ac9786aafce91ceea8493bf3 219 PANTHER PTHR31760:SF0 4 203 9.8E-65 T 23-04-2016 MSIP34_RS04920 87fa9e5986e75c68b4d60d85b0226301 164 Gene3D G3DSA:2.40.440.10 2 157 1.2E-27 T 23-04-2016 MSIP34_RS04920 87fa9e5986e75c68b4d60d85b0226301 164 Pfam PF03734 L,D-transpeptidase catalytic domain 8 155 1.7E-15 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 MSIP34_RS04920 87fa9e5986e75c68b4d60d85b0226301 164 SUPERFAMILY SSF141523 3 57 7.85E-25 T 23-04-2016 MSIP34_RS04920 87fa9e5986e75c68b4d60d85b0226301 164 SUPERFAMILY SSF141523 85 157 7.85E-25 T 23-04-2016 MSIP34_RS04920 87fa9e5986e75c68b4d60d85b0226301 164 PANTHER PTHR30582 1 160 2.7E-15 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 335 391 2.9E-9 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SMART SM00073 3 100 1.0E-29 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 1.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 558 1.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 577 1.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 498 1.7E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SUPERFAMILY SSF47226 4 112 2.62E-29 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Gene3D G3DSA:1.10.287.560 335 395 1.4E-14 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Gene3D G3DSA:2.40.50.180 619 666 1.9E-14 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Pfam PF01627 Hpt domain 6 95 1.2E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 579 4.8E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Gene3D G3DSA:3.30.565.10 396 579 7.8E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Gene3D G3DSA:1.20.120.160 3 115 1.7E-36 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Gene3D G3DSA:2.30.30.40 580 601 1.2E-22 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Gene3D G3DSA:2.30.30.40 667 710 1.2E-22 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SUPERFAMILY SSF47384 336 395 1.96E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SUPERFAMILY SSF55874 396 578 4.19E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PANTHER PTHR22617:SF20 261 726 5.8E-223 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PANTHER PTHR22617:SF20 1 244 5.8E-223 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 Pfam PF01584 CheW-like domain 585 714 1.4E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PANTHER PTHR22617 261 726 5.8E-223 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 PANTHER PTHR22617 1 244 5.8E-223 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SMART SM00260 572 711 2.5E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SMART SM01231 334 394 5.6E-13 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SUPERFAMILY SSF160246 264 330 4.18E-5 T 23-04-2016 MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SMART SM00387 439 580 2.4E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13600 1a0bed843d31bef13b901f09fdc93143 726 SUPERFAMILY SSF50341 579 711 8.11E-32 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Gene3D G3DSA:3.40.50.800 476 573 2.6E-30 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PANTHER PTHR11451:SF3 402 573 4.3E-151 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PANTHER PTHR11451:SF3 4 244 4.3E-151 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Pfam PF04073 Aminoacyl-tRNA editing domain 257 377 4.8E-30 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 SUPERFAMILY SSF55826 218 392 2.88E-34 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 SUPERFAMILY SSF52954 467 573 4.58E-31 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 574 41.021 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PIRSF PIRSF001535 1 574 1.4E-264 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PANTHER PTHR11451 402 573 4.3E-151 T 23-04-2016 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PANTHER PTHR11451 4 244 4.3E-151 T 23-04-2016 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Gene3D G3DSA:3.30.930.10 392 475 8.5E-103 T 23-04-2016 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Gene3D G3DSA:3.30.930.10 12 234 8.5E-103 T 23-04-2016 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 570 5.4E-228 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 5.0E-46 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Pfam PF03129 Anticodon binding domain 479 571 2.6E-20 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 SUPERFAMILY SSF55681 10 237 5.74E-101 T 23-04-2016 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 SUPERFAMILY SSF55681 410 481 5.74E-101 T 23-04-2016 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 Gene3D G3DSA:3.90.960.10 256 391 1.2E-29 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS11470 4baa82f7af1c745156e47cd75c71f849 574 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.3E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 Gene3D G3DSA:3.30.565.10 9 241 6.5E-85 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PIRSF PIRSF002583 2 628 8.9E-217 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 SMART SM00387 31 186 8.0E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PANTHER PTHR11528 7 628 0.0 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 SUPERFAMILY SSF54211 234 489 2.12E-99 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 SUPERFAMILY SSF55874 9 217 2.75E-69 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 Hamap MF_00505 Chaperone protein HtpG [htpG]. 6 628 33.599 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 SUPERFAMILY SSF110942 515 627 3.79E-39 T 23-04-2016 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 Pfam PF00183 Hsp90 protein 225 627 1.5E-135 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PANTHER PTHR11528:SF44 7 628 0.0 T 23-04-2016 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 158 6.7E-14 T 23-04-2016 MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 192 210 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 79 96 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 30 52 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 124 146 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 174 191 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 9 29 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS08945 06d5aadc3871c4988a45419ac5ef4c26 628 PRINTS PR00775 90kDa heat shock protein signature 97 114 4.3E-63 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 Gene3D G3DSA:1.10.10.10 134 236 2.5E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 SMART SM00862 157 233 5.9E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 PANTHER PTHR26402:SF292 6 236 1.3E-100 T 23-04-2016 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 PANTHER PTHR26402 6 236 1.3E-100 T 23-04-2016 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 Pfam PF00072 Response regulator receiver domain 8 118 1.2E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 Gene3D G3DSA:3.40.50.2300 5 125 5.1E-40 T 23-04-2016 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 SUPERFAMILY SSF46894 134 235 7.09E-27 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.5E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 SMART SM00448 6 117 6.4E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS10625 b21cbf631c3a1541a6a294fe07bb1147 242 SUPERFAMILY SSF52172 3 126 3.7E-41 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 198 6.7E-44 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 Gene3D G3DSA:3.40.50.300 359 661 1.5E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 Pfam PF01580 FtsK/SpoIIIE family 386 594 8.3E-65 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 SUPERFAMILY SSF52540 358 666 7.57E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 PANTHER PTHR22683:SF41 225 762 2.7E-258 T 23-04-2016 MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 SMART SM00382 420 615 4.0E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 SUPERFAMILY SSF46785 699 764 3.09E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 SMART SM00843 699 764 5.4E-38 T 23-04-2016 IPR018541 FtsK gamma domain MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 Pfam PF09397 Ftsk gamma domain 701 761 1.8E-26 T 23-04-2016 IPR018541 FtsK gamma domain MSIP34_RS06065 60678557207ce044cdc078683cdfa2ea 767 PANTHER PTHR22683 225 762 2.7E-258 T 23-04-2016 MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 PANTHER PTHR22777 1 419 5.5E-119 T 23-04-2016 MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 Gene3D G3DSA:3.30.465.10 321 418 1.1E-23 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 Pfam PF01595 Domain of unknown function DUF21 13 186 6.0E-48 T 23-04-2016 IPR002550 Domain of unknown function DUF21 MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 Pfam PF00571 CBS domain 280 327 9.1E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 Gene3D G3DSA:3.10.580.10 195 320 2.2E-17 T 23-04-2016 MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 Pfam PF03471 Transporter associated domain 345 418 6.9E-17 T 23-04-2016 IPR005170 Transporter-associated domain MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 SMART SM01091 343 419 1.9E-18 T 23-04-2016 IPR005170 Transporter-associated domain MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 SUPERFAMILY SSF54631 198 332 2.07E-26 T 23-04-2016 MSIP34_RS11240 f7ab2bd602ae7aa6586ebf960546ded7 419 SUPERFAMILY SSF56176 343 419 2.73E-19 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 SUPERFAMILY SSF52172 5 144 1.29E-11 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 Gene3D G3DSA:3.40.50.2300 6 131 1.3E-13 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 SMART SM00267 260 432 4.8E-63 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 Gene3D G3DSA:3.30.450.20 137 258 1.1E-19 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 261 5.1E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 SUPERFAMILY SSF55785 128 258 4.36E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 Gene3D G3DSA:3.30.70.270 272 433 6.7E-58 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 PANTHER PTHR10799:SF774 304 427 1.7E-40 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 PANTHER PTHR10799:SF774 36 136 1.7E-40 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 428 1.9E-53 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 9.5E-47 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 PANTHER PTHR10799 304 427 1.7E-40 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 PANTHER PTHR10799 36 136 1.7E-40 T 23-04-2016 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 Pfam PF00072 Response regulator receiver domain 33 123 5.6E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 SUPERFAMILY SSF55073 276 432 1.19E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 Pfam PF00989 PAS fold 147 257 4.4E-14 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 SMART SM00091 141 210 1.1E-4 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13350 84eb3ee04516ce6471ea342efd72e31e 435 SMART SM00086 218 260 0.0017 T 23-04-2016 IPR001610 PAC motif MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 SMART SM00028 57 90 13.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 SMART SM00028 125 153 67.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 SMART SM00028 91 124 9.2E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 SUPERFAMILY SSF54427 289 395 6.32E-17 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 PANTHER PTHR23083 33 163 1.4E-20 T 23-04-2016 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 Pfam PF13474 SnoaL-like domain 293 395 5.7E-5 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 Gene3D G3DSA:3.10.450.50 289 395 3.0E-7 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 Gene3D G3DSA:1.25.40.10 32 163 1.6E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 Pfam PF13414 TPR repeat 101 138 7.7E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 Pfam PF13432 Tetratricopeptide repeat 33 90 9.2E-8 T 23-04-2016 MSIP34_RS11315 f398a79fcf286f5aa2f9dc61747eecf3 400 SUPERFAMILY SSF48452 33 163 4.61E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 Pfam PF08502 LeuA allosteric (dimerisation) domain 375 505 8.7E-37 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 Gene3D G3DSA:3.20.20.70 5 352 4.2E-146 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 10 503 5.1E-214 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 PANTHER PTHR10277 7 514 3.6E-244 T 23-04-2016 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 SMART SM00917 375 506 5.1E-43 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 Pfam PF00682 HMGL-like 10 278 6.6E-96 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 PANTHER PTHR10277:SF9 7 514 3.6E-244 T 23-04-2016 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 7 515 43.272 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 204 217 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 SUPERFAMILY SSF51569 5 296 8.79E-99 T 23-04-2016 MSIP34_RS11210 bc894752859a53f012d5e3fa0f98dec7 517 SUPERFAMILY SSF110921 398 505 1.18E-24 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 Gene3D G3DSA:3.40.50.300 80 347 4.9E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 SUPERFAMILY SSF47917 349 464 8.11E-55 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 PANTHER PTHR15184:SF44 1 465 0.0 T 23-04-2016 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 SUPERFAMILY SSF50615 1 78 1.07E-24 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 Gene3D G3DSA:2.40.10.170 1 78 4.4E-30 T 23-04-2016 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 SUPERFAMILY SSF52540 81 352 2.44E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 Gene3D G3DSA:1.10.1140.10 349 464 6.6E-56 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.302 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 PANTHER PTHR15184 1 465 0.0 T 23-04-2016 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 2.4E-20 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 SMART SM00382 146 331 0.0013 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 6.3E-253 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14110 94ecfaf5672172fce4efff517d30b48f 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 134 346 7.2E-62 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS00730 40245525f20c735114febad7eef4e9d5 253 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 253 49.201 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS00730 40245525f20c735114febad7eef4e9d5 253 PANTHER PTHR34148 1 249 1.0E-49 T 23-04-2016 MSIP34_RS00730 40245525f20c735114febad7eef4e9d5 253 Pfam PF02654 Cobalamin-5-phosphate synthase 10 245 2.2E-54 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS00730 40245525f20c735114febad7eef4e9d5 253 PANTHER PTHR34148:SF1 1 249 1.0E-49 T 23-04-2016 MSIP34_RS00730 40245525f20c735114febad7eef4e9d5 253 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 10 246 3.5E-35 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 PANTHER PTHR30629 1 402 9.6E-97 T 23-04-2016 MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 Gene3D G3DSA:1.10.443.10 212 382 2.3E-19 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 SUPERFAMILY SSF56349 103 384 8.54E-51 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 PANTHER PTHR30629:SF4 1 402 9.6E-97 T 23-04-2016 MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 Gene3D G3DSA:1.10.150.130 103 195 5.6E-14 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 Pfam PF13356 Domain of unknown function (DUF4102) 1 91 7.6E-19 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 MSIP34_RS08475 7fe0dea13613c65cefb6163a1005f741 402 Pfam PF00589 Phage integrase family 211 374 3.6E-15 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 PANTHER PTHR10357:SF110 28 483 1.5E-102 T 23-04-2016 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 PANTHER PTHR10357:SF110 516 577 1.5E-102 T 23-04-2016 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 SUPERFAMILY SSF81296 28 120 7.2E-19 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Pfam PF00128 Alpha amylase, catalytic domain 146 230 2.2E-13 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Pfam PF00128 Alpha amylase, catalytic domain 249 450 1.3E-4 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Pfam PF11941 Domain of unknown function (DUF3459) 523 615 1.7E-17 T 23-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 37 579 9.4E-196 T 23-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 SMART SM00642 135 531 1.2E-9 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 PANTHER PTHR10357 28 483 1.5E-102 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 PANTHER PTHR10357 516 577 1.5E-102 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 34 101 1.9E-9 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Gene3D G3DSA:2.60.40.10 29 117 5.4E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Gene3D G3DSA:3.20.20.80 131 452 1.1E-73 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 Gene3D G3DSA:3.20.20.80 492 534 1.1E-73 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 PIRSF PIRSF006337 23 616 2.1E-206 T 23-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 MSIP34_RS12885 9b6588717d1795207ab101755d4a2d29 636 SUPERFAMILY SSF51445 114 534 5.37E-97 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Pfam PF08447 PAS fold 222 303 3.4E-6 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 PANTHER PTHR10799:SF774 817 836 1.1E-89 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 PANTHER PTHR10799:SF774 330 695 1.1E-89 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SUPERFAMILY SSF141868 621 868 5.89E-88 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 193 317 7.1E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 75 192 1.6E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 438 5.4E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Pfam PF00563 EAL domain 622 857 6.5E-72 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SUPERFAMILY SSF55073 449 606 5.73E-53 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Gene3D G3DSA:3.30.450.20 75 183 1.9E-16 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Gene3D G3DSA:3.20.20.450 618 868 1.2E-94 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Gene3D G3DSA:3.30.450.20 190 308 1.4E-17 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SUPERFAMILY SSF55785 182 309 5.41E-16 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00267 433 605 6.5E-68 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SUPERFAMILY SSF55785 324 431 2.79E-28 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00091 75 141 4.3E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00091 319 385 1.4E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SUPERFAMILY SSF55785 86 194 3.49E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00086 270 311 5.3E-4 T 23-04-2016 IPR001610 PAC motif MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00086 391 433 0.049 T 23-04-2016 IPR001610 PAC motif MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00086 145 185 3.6 T 23-04-2016 IPR001610 PAC motif MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 442 604 1.3E-47 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Gene3D G3DSA:3.30.450.20 309 425 3.3E-29 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Pfam PF00990 Diguanylate cyclase, GGDEF domain 444 601 2.8E-54 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 PANTHER PTHR10799 817 836 1.1E-89 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 PANTHER PTHR10799 330 695 1.1E-89 T 23-04-2016 MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Pfam PF13426 PAS domain 330 432 1.3E-16 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Pfam PF13426 PAS domain 86 184 1.5E-12 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 SMART SM00052 615 862 1.3E-107 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05980 7d3c9748241fcfdadb8e281ad3897de1 869 Gene3D G3DSA:3.30.70.270 446 613 1.6E-61 T 23-04-2016 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 Gene3D G3DSA:3.40.190.10 178 263 1.7E-6 T 23-04-2016 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.3E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 Gene3D G3DSA:1.10.10.10 4 86 2.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 SUPERFAMILY SSF53850 87 295 9.95E-47 T 23-04-2016 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 PANTHER PTHR30537:SF17 1 311 2.1E-120 T 23-04-2016 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 PANTHER PTHR30537 1 311 2.1E-120 T 23-04-2016 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 Pfam PF03466 LysR substrate binding domain 89 292 8.3E-46 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 SUPERFAMILY SSF46785 4 86 4.77E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12460 16d4d6a69d359f2aaae1c4b1cb533925 312 Gene3D G3DSA:3.40.190.10 92 177 8.5E-27 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Gene3D G3DSA:3.30.70.1430 572 662 7.3E-5 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Gene3D G3DSA:3.30.70.1430 42 142 5.7E-24 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82714 191 274 4.19E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Gene3D G3DSA:3.30.2090.10 718 807 1.0E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Gene3D G3DSA:3.30.2090.10 191 274 9.8E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PANTHER PTHR32063 2 1030 0.0 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82714 721 803 5.23E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 476 499 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 451 474 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 341 364 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 396 420 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 7.1E-44 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Pfam PF00873 AcrB/AcrD/AcrF family 6 1024 2.6E-297 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82866 299 503 1.83E-44 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82693 43 128 5.06E-20 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82693 567 662 4.19E-8 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82866 804 1028 6.28E-59 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Gene3D G3DSA:1.10.3850.10 287 504 3.2E-61 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 Gene3D G3DSA:1.10.3850.10 810 1027 2.1E-60 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 PANTHER PTHR32063:SF24 2 1030 0.0 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1026 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82693 159 190 3.66E-13 T 23-04-2016 MSIP34_RS11290 2e5a86ef33ddf49cc1834d144e59735a 1031 SUPERFAMILY SSF82693 276 335 3.66E-13 T 23-04-2016 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 PANTHER PTHR33569:SF1 2 99 2.0E-46 T 23-04-2016 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 PANTHER PTHR33569 2 99 2.0E-46 T 23-04-2016 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 Gene3D G3DSA:3.30.280.10 1 99 2.2E-49 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 35.242 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 2.0E-45 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.4E-54 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 PIRSF PIRSF001223 1 100 3.2E-51 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 Pfam PF00547 Urease, gamma subunit 1 99 4.6E-47 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03600 5c820cc19a4722cbc5a00f4894fd039d 100 SUPERFAMILY SSF54111 1 99 6.28E-47 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 PIRSF PIRSF004486 13 322 1.1E-103 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 PANTHER PTHR11265:SF0 19 323 9.2E-146 T 23-04-2016 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 Gene3D G3DSA:3.40.50.150 19 121 8.7E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 Gene3D G3DSA:3.40.50.150 228 321 8.7E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 PANTHER PTHR11265 19 323 9.2E-146 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 SUPERFAMILY SSF53335 225 321 2.8E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 SUPERFAMILY SSF53335 18 124 2.8E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 18 320 1.6E-112 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 Pfam PF01795 MraW methylase family 18 320 1.1E-108 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 Gene3D G3DSA:1.10.150.170 124 227 1.5E-36 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 19 321 38.691 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02305 c050bdfeecda6a733e440188d6a9b41d 324 SUPERFAMILY SSF81799 125 225 1.83E-32 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02765 bfc6fda979fc736044d0290ee7a98e61 282 PANTHER PTHR14194:SF73 2 282 8.6E-109 T 23-04-2016 MSIP34_RS02765 bfc6fda979fc736044d0290ee7a98e61 282 Gene3D G3DSA:3.40.50.720 2 217 1.0E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02765 bfc6fda979fc736044d0290ee7a98e61 282 Pfam PF13460 NAD(P)H-binding 6 185 5.0E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02765 bfc6fda979fc736044d0290ee7a98e61 282 PANTHER PTHR14194 2 282 8.6E-109 T 23-04-2016 MSIP34_RS02765 bfc6fda979fc736044d0290ee7a98e61 282 SUPERFAMILY SSF51735 2 245 7.54E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 PANTHER PTHR11669 1 365 2.8E-164 T 23-04-2016 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 Gene3D G3DSA:3.40.50.300 15 166 7.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 SUPERFAMILY SSF48019 244 362 8.67E-29 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 360 1.2E-24 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 PANTHER PTHR11669:SF0 1 365 2.8E-164 T 23-04-2016 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 SMART SM00382 37 179 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 Gene3D G3DSA:1.10.8.60 167 242 1.7E-31 T 23-04-2016 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 472 606 5.7E-13 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.0E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.0E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.4E-43 T 23-04-2016 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 Gene3D G3DSA:1.20.272.10 243 359 3.7E-37 T 23-04-2016 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 8.0E-131 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 MSIP34_RS08490 7cabd04f4a14d60c2b19da487909bcfb 610 SUPERFAMILY SSF52540 33 223 2.41E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Pfam PF08264 Anticodon-binding domain of tRNA 676 828 1.4E-40 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 SUPERFAMILY SSF52374 13 203 4.61E-136 T 23-04-2016 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 SUPERFAMILY SSF52374 352 567 4.61E-136 T 23-04-2016 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 SUPERFAMILY SSF52374 605 637 4.61E-136 T 23-04-2016 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 627 1.5E-205 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Gene3D G3DSA:1.10.730.10 627 822 2.4E-63 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PRINTS PR00986 Valyl-tRNA synthetase signature 502 520 1.4E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PRINTS PR00986 Valyl-tRNA synthetase signature 465 486 1.4E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PRINTS PR00986 Valyl-tRNA synthetase signature 47 58 1.4E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PRINTS PR00986 Valyl-tRNA synthetase signature 241 258 1.4E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 1.4E-35 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Gene3D G3DSA:3.90.740.10 205 348 1.3E-50 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 SUPERFAMILY SSF47323 638 898 2.62E-63 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PANTHER PTHR11946 879 946 0.0 T 23-04-2016 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PANTHER PTHR11946 3 566 0.0 T 23-04-2016 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PANTHER PTHR11946 604 862 0.0 T 23-04-2016 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 SUPERFAMILY SSF46589 883 947 1.1E-16 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 54 65 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 TIGRFAM TIGR00422 valS: valine--tRNA ligase 13 930 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 883 947 1.0E-18 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Gene3D G3DSA:3.40.50.620 14 204 2.3E-142 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Gene3D G3DSA:3.40.50.620 352 567 2.3E-142 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Gene3D G3DSA:3.40.50.620 605 626 2.3E-142 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PANTHER PTHR11946:SF5 879 946 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PANTHER PTHR11946:SF5 3 566 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 PANTHER PTHR11946:SF5 604 862 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Hamap MF_02004 Valine--tRNA ligase [valS]. 12 948 15.859 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 Gene3D G3DSA:1.10.287.380 878 947 4.4E-10 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 MSIP34_RS00505 bdb0fdaaf9a82a75fc3463ba5a5a6cb6 948 SUPERFAMILY SSF50677 202 353 1.83E-63 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 Gene3D G3DSA:3.40.50.300 2 252 3.7E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 2.8E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 Pfam PF00005 ABC transporter 22 182 3.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 SUPERFAMILY SSF52540 4 253 6.58E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 PANTHER PTHR24220:SF519 7 253 6.1E-120 T 23-04-2016 MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 SMART SM00382 30 231 5.5E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09835 196afa381040dd76468604b21e38043c 256 PANTHER PTHR24220 7 253 6.1E-120 T 23-04-2016 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 Gene3D G3DSA:3.20.20.70 1 261 5.6E-111 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 SUPERFAMILY SSF51366 13 260 4.71E-87 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 257 5.5E-95 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 PANTHER PTHR22854 1 262 7.9E-112 T 23-04-2016 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 PANTHER PTHR22854:SF2 1 262 7.9E-112 T 23-04-2016 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 MSIP34_RS12625 8c3765aebf43c2613e458e9f271343a8 262 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.605 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 MSIP34_RS00970 3d06c60f68386c9dfae927f1f2c093df 383 PANTHER PTHR34700 18 296 5.4E-41 T 23-04-2016 MSIP34_RS00970 3d06c60f68386c9dfae927f1f2c093df 383 PANTHER PTHR34700:SF2 18 296 5.4E-41 T 23-04-2016 MSIP34_RS00970 3d06c60f68386c9dfae927f1f2c093df 383 Pfam PF01476 LysM domain 33 79 3.3E-9 T 23-04-2016 IPR018392 LysM domain MSIP34_RS00970 3d06c60f68386c9dfae927f1f2c093df 383 SUPERFAMILY SSF54106 31 80 1.14E-5 T 23-04-2016 IPR018392 LysM domain MSIP34_RS00970 3d06c60f68386c9dfae927f1f2c093df 383 Gene3D G3DSA:3.10.350.10 31 80 4.7E-5 T 23-04-2016 IPR018392 LysM domain MSIP34_RS00970 3d06c60f68386c9dfae927f1f2c093df 383 SMART SM00257 32 81 3.4E-4 T 23-04-2016 IPR018392 LysM domain MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 652 732 1.3E-21 T 23-04-2016 IPR019489 Clp ATPase, C-terminal MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 517 535 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 PANTHER PTHR11638:SF111 1 761 0.0 T 23-04-2016 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 SMART SM01086 652 742 1.2E-31 T 23-04-2016 IPR019489 Clp ATPase, C-terminal MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Gene3D G3DSA:1.10.1780.10 1 141 1.9E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 SUPERFAMILY SSF81923 1 141 5.76E-58 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 23-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Pfam PF07724 AAA domain (Cdc48 subfamily) 485 645 3.9E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 SUPERFAMILY SSF52540 436 734 5.87E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Gene3D G3DSA:3.40.50.300 168 348 1.4E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 60 4.0E-13 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Gene3D G3DSA:3.40.50.300 440 663 6.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 341 3.0E-12 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Gene3D G3DSA:1.10.8.60 664 741 1.5E-27 T 23-04-2016 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 Gene3D G3DSA:1.10.8.60 351 431 6.4E-29 T 23-04-2016 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 608 1.8E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 579 1.8E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 550 1.8E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 490 508 1.8E-37 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 SMART SM00382 205 350 3.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 SMART SM00382 486 649 1.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 PANTHER PTHR11638 1 761 0.0 T 23-04-2016 MSIP34_RS11250 e7d180dbb38c47540f5d2132b29fb49c 761 SUPERFAMILY SSF52540 167 418 4.15E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 SUPERFAMILY SSF49503 176 318 5.32E-48 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 SUPERFAMILY SSF49503 122 147 5.32E-48 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PANTHER PTHR22888 1 307 1.8E-86 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 287 367 2.3E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 SUPERFAMILY SSF46626 280 373 3.15E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 Gene3D G3DSA:1.10.760.10 296 378 1.7E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 218 235 2.1E-24 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 198 218 2.1E-24 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 236 253 2.1E-24 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 174 195 2.1E-24 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 84 96 2.1E-24 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 128 251 2.1E-34 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 Gene3D G3DSA:1.10.287.90 26 119 9.9E-15 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 SUPERFAMILY SSF81464 21 104 2.29E-15 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 38 263 6.0E-50 T 23-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 PANTHER PTHR22888:SF2 1 307 1.8E-86 T 23-04-2016 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 199 247 - T 23-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 Gene3D G3DSA:2.60.40.420 120 295 1.3E-52 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS06190 81bc8e633d86df7f54a0b74da00abd0f 389 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 26 105 7.4E-11 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SUPERFAMILY SSF56507 963 1289 5.89E-117 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Pfam PF02310 B12 binding domain 805 900 3.0E-17 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 PIRSF PIRSF000381 81 1262 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SMART SM01018 702 789 6.4E-40 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Gene3D G3DSA:3.20.20.330 94 406 5.6E-126 T 23-04-2016 IPR003726 Homocysteine-binding domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Gene3D G3DSA:3.20.20.330 17 48 5.6E-126 T 23-04-2016 IPR003726 Homocysteine-binding domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Pfam PF02574 Homocysteine S-methyltransferase 29 368 2.1E-87 T 23-04-2016 IPR003726 Homocysteine-binding domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Gene3D G3DSA:3.20.20.20 407 678 1.8E-117 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 999 1275 3.8E-118 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SUPERFAMILY SSF52242 801 955 1.96E-43 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SUPERFAMILY SSF51717 399 673 6.93E-93 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SUPERFAMILY SSF82282 94 442 2.09E-113 T 23-04-2016 IPR003726 Homocysteine-binding domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SUPERFAMILY SSF82282 19 48 2.09E-113 T 23-04-2016 IPR003726 Homocysteine-binding domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Gene3D G3DSA:3.10.196.10 1019 1289 2.4E-100 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 SUPERFAMILY SSF47644 703 788 2.35E-25 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Pfam PF02607 B12 binding domain 706 781 5.8E-25 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 PANTHER PTHR21091 86 441 5.7E-155 T 23-04-2016 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 PANTHER PTHR21091 1 45 5.7E-155 T 23-04-2016 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 TIGRFAM TIGR02082 metH: methionine synthase 92 1259 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Gene3D G3DSA:3.40.50.280 801 956 2.7E-63 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Gene3D G3DSA:1.10.1240.10 702 786 1.4E-34 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 Pfam PF00809 Pterin binding enzyme 403 641 8.6E-61 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 PANTHER PTHR21091:SF112 86 441 5.7E-155 T 23-04-2016 MSIP34_RS12970 0f81d43b46ca8b8a57662feea7d23710 1289 PANTHER PTHR21091:SF112 1 45 5.7E-155 T 23-04-2016 MSIP34_RS14130 301e8558bc4c88eb058697dbe04ad2d6 156 Gene3D G3DSA:1.20.5.620 65 122 1.5E-18 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain MSIP34_RS14130 301e8558bc4c88eb058697dbe04ad2d6 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.5E-46 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 MSIP34_RS14130 301e8558bc4c88eb058697dbe04ad2d6 156 SUPERFAMILY SSF81573 64 121 9.02E-14 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain MSIP34_RS14130 301e8558bc4c88eb058697dbe04ad2d6 156 PANTHER PTHR33445 1 156 3.8E-41 T 23-04-2016 MSIP34_RS14130 301e8558bc4c88eb058697dbe04ad2d6 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.529 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MSIP34_RS14130 301e8558bc4c88eb058697dbe04ad2d6 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.3E-32 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MSIP34_RS07215 c02da4b741adac56d67547eea7b52098 283 Gene3D G3DSA:1.10.600.10 18 280 8.9E-58 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS07215 c02da4b741adac56d67547eea7b52098 283 PANTHER PTHR31480:SF8 9 268 3.4E-68 T 23-04-2016 MSIP34_RS07215 c02da4b741adac56d67547eea7b52098 283 PANTHER PTHR31480 9 268 3.4E-68 T 23-04-2016 MSIP34_RS07215 c02da4b741adac56d67547eea7b52098 283 Pfam PF00494 Squalene/phytoene synthase 17 267 1.7E-55 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 MSIP34_RS07215 c02da4b741adac56d67547eea7b52098 283 TIGRFAM TIGR03464 HpnC: squalene synthase HpnC 15 280 1.4E-103 T 23-04-2016 IPR017827 Squalene synthase HpnC MSIP34_RS07215 c02da4b741adac56d67547eea7b52098 283 SUPERFAMILY SSF48576 15 281 1.44E-63 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS12705 a825feaa020aaa5c57df23e6562d1d57 421 TIGRFAM TIGR00901 2A0125: AmpG-like permease 27 365 3.4E-112 T 23-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 MSIP34_RS12705 a825feaa020aaa5c57df23e6562d1d57 421 Pfam PF07690 Major Facilitator Superfamily 20 369 1.9E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS12705 a825feaa020aaa5c57df23e6562d1d57 421 Gene3D G3DSA:1.20.1250.20 225 406 1.1E-13 T 23-04-2016 MSIP34_RS12705 a825feaa020aaa5c57df23e6562d1d57 421 Gene3D G3DSA:1.20.1250.20 13 199 6.0E-14 T 23-04-2016 MSIP34_RS12705 a825feaa020aaa5c57df23e6562d1d57 421 SUPERFAMILY SSF103473 5 407 9.55E-36 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS12705 a825feaa020aaa5c57df23e6562d1d57 421 PANTHER PTHR12778 14 405 6.3E-97 T 23-04-2016 MSIP34_RS06255 2ec7e7f252e0a75396f986c54ac4bee7 101 Pfam PF03658 RnfH family Ubiquitin 7 89 1.1E-34 T 23-04-2016 IPR005346 RnfH protein MSIP34_RS06255 2ec7e7f252e0a75396f986c54ac4bee7 101 SUPERFAMILY SSF54285 7 81 3.4E-25 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MSIP34_RS06255 2ec7e7f252e0a75396f986c54ac4bee7 101 Hamap MF_00460 Protein RnfH [rnfH]. 7 97 24.69 T 23-04-2016 IPR005346 RnfH protein MSIP34_RS06255 2ec7e7f252e0a75396f986c54ac4bee7 101 PANTHER PTHR37483:SF1 4 97 1.2E-33 T 23-04-2016 MSIP34_RS06255 2ec7e7f252e0a75396f986c54ac4bee7 101 Gene3D G3DSA:3.10.20.280 4 91 3.1E-36 T 23-04-2016 IPR005346 RnfH protein MSIP34_RS06255 2ec7e7f252e0a75396f986c54ac4bee7 101 PANTHER PTHR37483 4 97 1.2E-33 T 23-04-2016 MSIP34_RS03295 e329ba4d7ad82e649ad688719b5d9949 273 Gene3D G3DSA:3.40.50.300 1 250 2.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03295 e329ba4d7ad82e649ad688719b5d9949 273 PANTHER PTHR13696 1 260 7.1E-42 T 23-04-2016 MSIP34_RS03295 e329ba4d7ad82e649ad688719b5d9949 273 SUPERFAMILY SSF52540 1 252 6.69E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03295 e329ba4d7ad82e649ad688719b5d9949 273 Pfam PF13614 AAA domain 1 172 3.3E-32 T 23-04-2016 IPR025669 AAA domain MSIP34_RS03295 e329ba4d7ad82e649ad688719b5d9949 273 PANTHER PTHR13696:SF52 1 260 7.1E-42 T 23-04-2016 MSIP34_RS05475 299e7d8cb57144b2027c5d525935bf91 276 SUPERFAMILY SSF53335 39 173 7.05E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05475 299e7d8cb57144b2027c5d525935bf91 276 Pfam PF13679 Methyltransferase domain 34 174 4.2E-44 T 23-04-2016 IPR025714 Methyltransferase domain MSIP34_RS05475 299e7d8cb57144b2027c5d525935bf91 276 Gene3D G3DSA:3.40.50.150 38 180 4.5E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05475 299e7d8cb57144b2027c5d525935bf91 276 PANTHER PTHR13369 24 249 1.6E-24 T 23-04-2016 MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 Pfam PF00288 GHMP kinases N terminal domain 87 144 1.3E-11 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 SUPERFAMILY SSF54211 5 159 1.82E-47 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 PANTHER PTHR20861:SF2 6 267 7.9E-86 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 Gene3D G3DSA:3.30.230.10 7 159 1.6E-55 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 PANTHER PTHR20861 6 267 7.9E-86 T 23-04-2016 MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 Pfam PF08544 GHMP kinases C terminal 213 259 2.9E-4 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 SUPERFAMILY SSF55060 161 269 4.8E-30 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 Gene3D G3DSA:3.30.70.890 162 282 3.0E-37 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 264 1.2E-83 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 PIRSF PIRSF010376 4 279 1.5E-87 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS10145 702e6b5924f4108481f45aeb18e00b48 286 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 269 33.54 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 SUPERFAMILY SSF53383 5 390 1.18E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 3 395 53.91 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 Gene3D G3DSA:3.40.640.10 19 253 3.7E-96 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 Gene3D G3DSA:3.90.1150.10 254 374 4.1E-53 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 4 404 1.1E-221 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 Pfam PF00266 Aminotransferase class-V 7 368 1.1E-88 T 23-04-2016 IPR000192 Aminotransferase class V domain MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 PANTHER PTHR11601:SF34 2 404 5.9E-231 T 23-04-2016 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 PIRSF PIRSF005572 4 384 2.1E-133 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 MSIP34_RS09350 5e42775f2ef841ff759aaee0d0dbe711 404 PANTHER PTHR11601 2 404 5.9E-231 T 23-04-2016 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 346 1.1E-129 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 49.584 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 PANTHER PTHR21091:SF2 1 349 1.0E-148 T 23-04-2016 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 PANTHER PTHR21091 1 349 1.0E-148 T 23-04-2016 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 SUPERFAMILY SSF51726 1 351 1.13E-121 T 23-04-2016 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 Gene3D G3DSA:3.20.20.210 3 349 2.6E-150 T 23-04-2016 MSIP34_RS14060 6f7eda98a276612b2fcc65afdb77894f 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 3.5E-137 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01300 985789452a2fa8361d8c8b248118c9fc 212 PANTHER PTHR11649 9 195 4.5E-46 T 23-04-2016 MSIP34_RS01300 985789452a2fa8361d8c8b248118c9fc 212 Gene3D G3DSA:3.40.50.300 7 194 1.9E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01300 985789452a2fa8361d8c8b248118c9fc 212 Pfam PF01926 50S ribosome-binding GTPase 26 144 4.5E-18 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS01300 985789452a2fa8361d8c8b248118c9fc 212 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 1.8E-69 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 MSIP34_RS01300 985789452a2fa8361d8c8b248118c9fc 212 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 27.262 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 MSIP34_RS01300 985789452a2fa8361d8c8b248118c9fc 212 SUPERFAMILY SSF52540 24 197 4.86E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 Pfam PF00005 ABC transporter 20 165 4.3E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 1.1E-117 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 Gene3D G3DSA:3.40.50.300 4 233 4.5E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 SUPERFAMILY SSF52540 4 236 1.5E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 235 1.8E-4 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 PANTHER PTHR24220 5 237 3.6E-139 T 23-04-2016 MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 SMART SM00382 28 215 5.6E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS01070 ee869d753ff32c8d1bc60f44aa493709 240 PANTHER PTHR24220:SF497 5 237 3.6E-139 T 23-04-2016 MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 PANTHER PTHR18895 32 208 8.2E-38 T 23-04-2016 MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 Pfam PF03602 Conserved hypothetical protein 95 32 207 6.6E-47 T 23-04-2016 MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 PIRSF PIRSF004553 31 211 3.4E-40 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 PANTHER PTHR18895:SF60 32 208 8.2E-38 T 23-04-2016 MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 SUPERFAMILY SSF53335 32 205 7.06E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 149 155 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 Gene3D G3DSA:3.40.50.150 23 210 4.1E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09715 55f47101622e3e8affc5ca09ec1a2e0f 214 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 28 208 4.3E-42 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS03835 dd946c0d5026b6985f17305ca69d665e 663 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 6.5E-25 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 MSIP34_RS03835 dd946c0d5026b6985f17305ca69d665e 663 PANTHER PTHR30288 576 662 2.7E-86 T 23-04-2016 MSIP34_RS03835 dd946c0d5026b6985f17305ca69d665e 663 PANTHER PTHR30288 2 400 2.7E-86 T 23-04-2016 MSIP34_RS03835 dd946c0d5026b6985f17305ca69d665e 663 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 242 646 5.2E-54 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 MSIP34_RS03835 dd946c0d5026b6985f17305ca69d665e 663 PANTHER PTHR30288:SF0 576 662 2.7E-86 T 23-04-2016 MSIP34_RS03835 dd946c0d5026b6985f17305ca69d665e 663 PANTHER PTHR30288:SF0 2 400 2.7E-86 T 23-04-2016 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 Pfam PF01676 Metalloenzyme superfamily 5 499 1.6E-74 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 511 49.476 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 PANTHER PTHR31637 5 514 2.7E-264 T 23-04-2016 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 Gene3D G3DSA:3.40.720.10 5 77 3.3E-85 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 Gene3D G3DSA:3.40.720.10 315 510 3.3E-85 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 510 1.6E-212 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 Gene3D G3DSA:3.40.1450.10 78 310 1.0E-90 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 2.1E-81 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 SUPERFAMILY SSF64158 77 300 3.92E-80 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 SUPERFAMILY SSF53649 311 510 1.57E-72 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 SUPERFAMILY SSF53649 5 77 1.57E-72 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 PIRSF PIRSF001492 1 512 1.1E-200 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS02805 b366edaf6c32a2a059cabc372f5f35d6 518 PANTHER PTHR31637:SF0 5 514 2.7E-264 T 23-04-2016 MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 122 137 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 276 1.9E-112 T 23-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 PANTHER PTHR31480 5 277 5.9E-82 T 23-04-2016 MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 SUPERFAMILY SSF48576 3 277 6.12E-90 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 Pfam PF00494 Squalene/phytoene synthase 13 263 1.0E-83 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 152 177 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 MSIP34_RS07220 7c8837b0c035aa7ab04059cb79b5d3b8 278 Gene3D G3DSA:1.10.600.10 5 277 3.5E-91 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 PIRSF PIRSF000239 1 210 1.8E-77 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 PANTHER PTHR10681:SF99 4 208 2.1E-89 T 23-04-2016 MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 SUPERFAMILY SSF52833 4 210 1.66E-68 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 Pfam PF00578 AhpC/TSA family 7 135 1.6E-30 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 192 3.4E-10 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 PANTHER PTHR10681 4 208 2.1E-89 T 23-04-2016 MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 Gene3D G3DSA:3.30.1020.10 159 212 3.8E-27 T 23-04-2016 MSIP34_RS00610 b3685efd446a1f2ec785d91c819cf86f 213 Gene3D G3DSA:3.40.30.10 6 158 1.5E-61 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 PANTHER PTHR30537 1 287 6.4E-102 T 23-04-2016 MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 PANTHER PTHR30537:SF24 1 287 6.4E-102 T 23-04-2016 MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 Gene3D G3DSA:1.10.10.10 1 80 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 SUPERFAMILY SSF46785 2 105 3.33E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 Pfam PF03466 LysR substrate binding domain 82 286 2.4E-42 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 56 8.2E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 SUPERFAMILY SSF53850 83 290 1.63E-44 T 23-04-2016 MSIP34_RS13295 86fed31c6db4f8d7516b0900251a18c8 292 Gene3D G3DSA:3.40.190.10 86 184 9.1E-22 T 23-04-2016 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 SUPERFAMILY SSF53686 7 393 5.63E-151 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 PIRSF PIRSF001413 1 400 1.3E-167 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 PANTHER PTHR10314 11 393 5.5E-231 T 23-04-2016 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 PANTHER PTHR10314:SF3 11 393 5.5E-231 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 Gene3D G3DSA:3.40.50.1100 182 396 1.7E-98 T 23-04-2016 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 393 2.7E-192 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 383 9.0E-53 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 396 53.213 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07865 58df511b28e32b21e3b75fc9f225f4a0 400 Gene3D G3DSA:3.40.50.1100 102 181 2.1E-22 T 23-04-2016 MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 Gene3D G3DSA:3.20.20.100 1 343 1.6E-99 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 PANTHER PTHR11732 162 351 1.9E-142 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 PANTHER PTHR11732 1 138 1.9E-142 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 PANTHER PTHR11732:SF112 162 351 1.9E-142 T 23-04-2016 MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 PANTHER PTHR11732:SF112 1 138 1.9E-142 T 23-04-2016 MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 Pfam PF00248 Aldo/keto reductase family 15 341 1.0E-67 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain MSIP34_RS11595 5285094d26835f01ea865059d222aa6d 351 SUPERFAMILY SSF51430 1 349 9.3E-102 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 SMART SM00448 12 123 1.6E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 PANTHER PTHR32071 1 461 1.9E-189 T 23-04-2016 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 SUPERFAMILY SSF52172 10 193 4.55E-44 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 Pfam PF00158 Sigma-54 interaction domain 149 315 5.5E-71 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 Gene3D G3DSA:1.10.8.60 323 395 1.4E-21 T 23-04-2016 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 PANTHER PTHR32071:SF5 1 461 1.9E-189 T 23-04-2016 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 235 250 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 Gene3D G3DSA:3.40.50.300 147 320 1.6E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 Gene3D G3DSA:1.10.10.60 406 450 2.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 SMART SM00382 169 312 3.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 Pfam PF00072 Response regulator receiver domain 14 123 7.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 SUPERFAMILY SSF46689 399 450 1.97E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 SUPERFAMILY SSF52540 149 393 3.01E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04500 70dbf5315f6fefe14f9820e64c6414c0 464 Gene3D G3DSA:3.40.50.2300 11 128 8.6E-37 T 23-04-2016 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 PANTHER PTHR21235:SF1 3 210 5.3E-81 T 23-04-2016 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 209 8.8E-64 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 SUPERFAMILY SSF52317 4 210 1.24E-50 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 PANTHER PTHR21235 3 210 5.3E-81 T 23-04-2016 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 Pfam PF00117 Glutamine amidotransferase class-I 6 207 2.4E-18 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 210 35.059 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 PIRSF PIRSF000495 2 212 8.6E-68 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 MSIP34_RS01405 7659311ac81f220e432e0573a3d8e34f 214 Gene3D G3DSA:3.40.50.880 1 210 3.4E-76 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 Gene3D G3DSA:3.40.50.620 252 259 5.1E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 Gene3D G3DSA:3.40.50.620 5 212 5.1E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PIRSF PIRSF002936 3 311 1.1E-133 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 12 311 3.0E-120 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PANTHER PTHR23293 4 160 2.2E-66 T 23-04-2016 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PANTHER PTHR23293 180 213 2.2E-66 T 23-04-2016 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PANTHER PTHR23293 253 311 2.2E-66 T 23-04-2016 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PANTHER PTHR23293:SF6 4 160 2.2E-66 T 23-04-2016 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PANTHER PTHR23293:SF6 180 213 2.2E-66 T 23-04-2016 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 PANTHER PTHR23293:SF6 253 311 2.2E-66 T 23-04-2016 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 32 265 1.3E-43 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 MSIP34_RS07740 fd8a609043d6d5ab57e85430ccaadfdc 311 SUPERFAMILY SSF52402 9 212 1.82E-60 T 23-04-2016 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 SUPERFAMILY SSF100879 249 354 5.69E-25 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 Gene3D G3DSA:3.30.70.270 77 170 1.2E-25 T 23-04-2016 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 Pfam PF11798 IMS family HHH motif 175 204 2.3E-5 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 SUPERFAMILY SSF56672 1 248 5.78E-65 T 23-04-2016 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 Pfam PF00817 impB/mucB/samB family 1 160 3.1E-36 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 355 1.5E-17 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 Gene3D G3DSA:1.10.150.20 173 245 3.0E-19 T 23-04-2016 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 PANTHER PTHR11076 49 361 1.2E-87 T 23-04-2016 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 PANTHER PTHR11076 1 27 1.2E-87 T 23-04-2016 MSIP34_RS07185 616aa4e7f974fe09c1f4f8915e4c5575 369 Gene3D G3DSA:3.30.1490.100 249 356 3.0E-29 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 6 230 39.536 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 Pfam PF00912 Transglycosylase 57 224 6.5E-57 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 SUPERFAMILY SSF53955 57 226 2.42E-60 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 PANTHER PTHR30400:SF0 1 227 1.5E-73 T 23-04-2016 MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 PANTHER PTHR30400 1 227 1.5E-73 T 23-04-2016 MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 Gene3D G3DSA:1.10.3810.10 58 226 1.1E-66 T 23-04-2016 MSIP34_RS12520 d554d2eeb0b7a7c0412994475e5e4096 230 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 13 229 3.5E-97 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 MSIP34_RS12840 5a80127ac1388faa7632878213a8d35d 112 Gene3D G3DSA:2.60.40.1220 18 110 1.5E-18 T 23-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like MSIP34_RS12840 5a80127ac1388faa7632878213a8d35d 112 SUPERFAMILY SSF81296 18 110 1.54E-16 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS12840 5a80127ac1388faa7632878213a8d35d 112 Pfam PF04234 CopC domain 19 110 1.7E-18 T 23-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 PANTHER PTHR30349 8 297 1.0E-111 T 23-04-2016 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 298 31.994 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 SUPERFAMILY SSF56349 7 289 1.74E-59 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 Pfam PF00589 Phage integrase family 113 283 1.0E-51 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 3.7E-16 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 60.654 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 PANTHER PTHR30349:SF5 8 297 1.0E-111 T 23-04-2016 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 Gene3D G3DSA:1.10.443.10 114 289 1.4E-58 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 11 297 1.1E-115 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 MSIP34_RS12015 6e615145ff55fa86e4c7d4b7f67833f4 298 Gene3D G3DSA:1.10.150.130 8 99 1.3E-23 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 SMART SM00642 99 556 3.8E-28 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 Gene3D G3DSA:2.60.40.1180 568 649 7.1E-10 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 Pfam PF00128 Alpha amylase, catalytic domain 107 347 5.1E-47 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 SUPERFAMILY SSF51445 21 563 2.86E-117 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 Gene3D G3DSA:3.90.400.10 186 256 5.0E-24 T 23-04-2016 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 PANTHER PTHR10357:SF122 46 398 5.1E-156 T 23-04-2016 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 PANTHER PTHR10357:SF122 453 609 5.1E-156 T 23-04-2016 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 Gene3D G3DSA:3.20.20.80 264 558 4.1E-94 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 Gene3D G3DSA:3.20.20.80 93 185 4.1E-94 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 SUPERFAMILY SSF51011 571 649 5.47E-7 T 23-04-2016 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 PANTHER PTHR10357 46 398 5.1E-156 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS13855 5ca6421b4bc731e781313c613f629015 650 PANTHER PTHR10357 453 609 5.1E-156 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 Gene3D G3DSA:3.40.190.10 49 124 6.8E-10 T 23-04-2016 MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 Gene3D G3DSA:3.40.190.10 241 276 6.8E-10 T 23-04-2016 MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 SUPERFAMILY SSF53850 44 274 3.26E-26 T 23-04-2016 MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 TIGRFAM TIGR03871 ABC_peri_MoxJ_2: quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein 49 281 1.6E-88 T 23-04-2016 IPR022448 Quinoprotein dehydrogenase-associated MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 61 268 5.6E-18 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 Gene3D G3DSA:3.40.190.10 125 231 7.2E-4 T 23-04-2016 MSIP34_RS11805 4250f206903017d3ff93349f4491d294 304 SMART SM00062 49 275 2.8E-21 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 631 768 1.6E-28 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 280 2.3E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 470 1.6E-14 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Pfam PF04324 BFD-like [2Fe-2S] binding domain 486 536 2.0E-12 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 561 623 2.1E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 SUPERFAMILY SSF51905 142 309 5.7E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 4.3E-11 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.3E-11 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.3E-11 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 4.3E-11 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Gene3D G3DSA:3.50.50.60 111 305 3.5E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 SUPERFAMILY SSF51905 1 193 6.26E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PANTHER PTHR22912:SF1 1 414 1.5E-156 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.3E-20 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.3E-20 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 6.3E-20 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 6.3E-20 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 6.3E-20 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Gene3D G3DSA:3.30.413.10 631 767 1.5E-37 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 SUPERFAMILY SSF56014 632 800 7.46E-52 T 23-04-2016 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 795 1.1E-290 T 23-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 3.5E-7 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 3.5E-7 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PIRSF PIRSF037149 1 808 0.0 T 23-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 SUPERFAMILY SSF55124 520 640 2.47E-26 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 Gene3D G3DSA:3.50.50.60 1 110 2.9E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01805 e05af07fbdb50fd6bec1ce43804ece07 808 PANTHER PTHR22912 1 414 1.5E-156 T 23-04-2016 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Pfam PF00958 GMP synthase C terminal domain 446 534 7.3E-41 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 SUPERFAMILY SSF52317 3 233 2.87E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 PANTHER PTHR11922 1 532 7.8E-271 T 23-04-2016 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 535 54.632 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Gene3D G3DSA:3.30.300.10 404 535 8.8E-52 T 23-04-2016 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Pfam PF00117 Glutamine amidotransferase class-I 8 196 1.4E-37 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Gene3D G3DSA:3.40.50.620 220 402 7.3E-56 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 PANTHER PTHR11922:SF2 1 532 7.8E-271 T 23-04-2016 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 SUPERFAMILY SSF52402 193 422 2.01E-56 T 23-04-2016 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 200 8.2E-73 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Gene3D G3DSA:3.40.50.880 2 219 2.0E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 535 1.5E-140 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 SUPERFAMILY SSF54810 408 535 2.75E-46 T 23-04-2016 MSIP34_RS06240 7c7aeeb5c5992388cd1815c4a343311b 535 Pfam PF02540 NAD synthase 214 252 5.9E-7 T 23-04-2016 IPR022310 NAD/GMP synthase MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PIRSF PIRSF001400 1 425 8.6E-190 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 Gene3D G3DSA:3.30.390.10 4 126 1.8E-55 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PANTHER PTHR11902 1 428 2.8E-255 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 SUPERFAMILY SSF54826 4 136 1.28E-56 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 Hamap MF_00318 Enolase [eno]. 2 411 44.921 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 423 1.8E-128 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 SUPERFAMILY SSF51604 140 425 8.91E-127 T 23-04-2016 IPR029065 Enolase C-terminal domain-like MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 SMART SM01192 139 425 1.1E-217 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PRINTS PR00148 Enolase signature 334 348 3.2E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PRINTS PR00148 Enolase signature 107 123 3.2E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PRINTS PR00148 Enolase signature 311 322 3.2E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PRINTS PR00148 Enolase signature 37 51 3.2E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PRINTS PR00148 Enolase signature 161 174 3.2E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 PRINTS PR00148 Enolase signature 363 380 3.2E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 SMART SM01193 4 134 2.2E-95 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 Pfam PF03952 Enolase, N-terminal domain 4 134 6.6E-60 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 1.0E-207 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS04385 6501e5daf252410068aa81ba34205265 428 Gene3D G3DSA:3.20.20.120 128 424 8.3E-130 T 23-04-2016 IPR029065 Enolase C-terminal domain-like MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 PANTHER PTHR20857 121 315 8.3E-30 T 23-04-2016 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 Gene3D G3DSA:3.90.79.10 7 125 2.3E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 Pfam PF00293 NUDIX domain 8 126 3.5E-21 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 SUPERFAMILY SSF55811 3 129 2.44E-35 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 PRINTS PR00502 NUDIX hydrolase family signature 36 50 2.2E-6 T 23-04-2016 IPR020476 NUDIX hydrolase MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 PRINTS PR00502 NUDIX hydrolase family signature 50 65 2.2E-6 T 23-04-2016 IPR020476 NUDIX hydrolase MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 Gene3D G3DSA:3.20.20.70 126 314 9.5E-49 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 SUPERFAMILY SSF51391 118 314 8.76E-51 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 MSIP34_RS02565 4372120f4711542893704e4bcaab7f5a 316 Pfam PF02581 Thiamine monophosphate synthase/TENI 134 309 7.5E-43 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 9 468 1.0E-143 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 SMART SM00997 230 389 3.8E-115 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 PANTHER PTHR23420 9 144 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 PANTHER PTHR23420 180 469 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 5 461 48.143 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Gene3D G3DSA:3.40.50.720 269 368 3.7E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 252 268 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 230 389 2.7E-81 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 10 461 3.9E-183 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 PIRSF PIRSF001109 1 469 3.5E-188 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 SMART SM00996 9 468 0.0 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 SUPERFAMILY SSF51735 230 389 5.03E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Gene3D G3DSA:3.40.50.1480 390 469 7.5E-33 T 23-04-2016 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 SUPERFAMILY SSF52283 182 229 1.98E-112 T 23-04-2016 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 SUPERFAMILY SSF52283 390 469 1.98E-112 T 23-04-2016 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 SUPERFAMILY SSF52283 7 146 1.98E-112 T 23-04-2016 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Gene3D G3DSA:3.40.50.1480 8 145 6.0E-122 T 23-04-2016 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 Gene3D G3DSA:3.40.50.1480 181 268 6.0E-122 T 23-04-2016 MSIP34_RS00945 2d709fb74678d60aff7706e2faba37f8 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 81 95 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 PANTHER PTHR11649:SF37 195 590 7.1E-197 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 PANTHER PTHR11649:SF37 3 144 7.1E-197 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 SUPERFAMILY SSF52540 3 165 2.09E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 Pfam PF07664 Ferrous iron transport protein B C terminus 387 436 3.5E-13 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 Pfam PF07670 Nucleoside recognition 442 562 1.9E-24 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 Pfam PF07670 Nucleoside recognition 284 374 1.7E-9 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 Pfam PF02421 Ferrous iron transport protein B 3 155 9.9E-47 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 184 560 5.8E-108 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 PANTHER PTHR11649 195 590 7.1E-197 T 23-04-2016 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 PANTHER PTHR11649 3 144 7.1E-197 T 23-04-2016 MSIP34_RS04645 7a131da507fe65fa4d30c5818809474c 594 Gene3D G3DSA:3.40.50.300 3 167 1.8E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 7 397 50.645 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 Gene3D G3DSA:3.30.470.20 200 394 1.2E-70 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 PANTHER PTHR11609 1 389 5.5E-196 T 23-04-2016 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 Pfam PF02222 ATP-grasp domain 123 301 8.1E-51 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 13 395 2.2E-172 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 Gene3D G3DSA:3.40.50.20 3 120 1.5E-37 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 SUPERFAMILY SSF56059 113 320 7.6E-53 T 23-04-2016 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 Gene3D G3DSA:3.30.1490.20 124 199 9.7E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 SUPERFAMILY SSF52440 3 112 2.88E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 80 1.1E-4 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 SUPERFAMILY SSF51246 325 396 1.22E-17 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS08820 b19815e626c4b5a13254dad78f2e09c2 399 PANTHER PTHR11609:SF7 1 389 5.5E-196 T 23-04-2016 MSIP34_RS06180 84c6620ceb99cf5dd6d184df5629cb17 180 PIRSF PIRSF005413 3 180 2.9E-63 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 MSIP34_RS06180 84c6620ceb99cf5dd6d184df5629cb17 180 SUPERFAMILY SSF110111 60 177 1.22E-44 T 23-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain MSIP34_RS06180 84c6620ceb99cf5dd6d184df5629cb17 180 PANTHER PTHR21320 14 178 3.5E-41 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 MSIP34_RS06180 84c6620ceb99cf5dd6d184df5629cb17 180 PANTHER PTHR21320:SF3 14 178 3.5E-41 T 23-04-2016 MSIP34_RS06180 84c6620ceb99cf5dd6d184df5629cb17 180 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 35 176 4.2E-52 T 23-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 MSIP34_RS06180 84c6620ceb99cf5dd6d184df5629cb17 180 Gene3D G3DSA:2.60.370.10 60 178 1.3E-46 T 23-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain MSIP34_RS02790 13bbf0896029812b7893fc90ecd99e15 396 Gene3D G3DSA:3.40.50.1970 6 190 7.8E-41 T 23-04-2016 MSIP34_RS02790 13bbf0896029812b7893fc90ecd99e15 396 PANTHER PTHR11496:SF68 3 394 1.3E-70 T 23-04-2016 MSIP34_RS02790 13bbf0896029812b7893fc90ecd99e15 396 Gene3D G3DSA:1.20.1090.10 191 394 5.7E-39 T 23-04-2016 MSIP34_RS02790 13bbf0896029812b7893fc90ecd99e15 396 Pfam PF00465 Iron-containing alcohol dehydrogenase 13 388 2.9E-90 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 MSIP34_RS02790 13bbf0896029812b7893fc90ecd99e15 396 SUPERFAMILY SSF56796 5 394 9.55E-84 T 23-04-2016 MSIP34_RS02790 13bbf0896029812b7893fc90ecd99e15 396 PANTHER PTHR11496 3 394 1.3E-70 T 23-04-2016 MSIP34_RS03830 389f4d7279715cc995421f74deca53bf 120 PANTHER PTHR37166 39 120 1.5E-16 T 23-04-2016 MSIP34_RS03830 389f4d7279715cc995421f74deca53bf 120 Gene3D G3DSA:3.30.160.170 26 115 4.6E-26 T 23-04-2016 IPR005186 FlaG protein MSIP34_RS03830 389f4d7279715cc995421f74deca53bf 120 Pfam PF03646 FlaG protein 27 117 1.4E-25 T 23-04-2016 IPR005186 FlaG protein MSIP34_RS03830 389f4d7279715cc995421f74deca53bf 120 PANTHER PTHR37166:SF1 39 120 1.5E-16 T 23-04-2016 MSIP34_RS03830 389f4d7279715cc995421f74deca53bf 120 SUPERFAMILY SSF160214 25 119 1.44E-25 T 23-04-2016 IPR005186 FlaG protein MSIP34_RS07070 0f77cff9c222237dfc8636ebc5f8125c 167 PANTHER PTHR38099 1 163 6.5E-19 T 23-04-2016 MSIP34_RS07070 0f77cff9c222237dfc8636ebc5f8125c 167 Pfam PF02620 Uncharacterized ACR, COG1399 57 161 2.4E-17 T 23-04-2016 IPR003772 Protein of unknown function DUF177 MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 257 291 1.8E-5 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 Gene3D G3DSA:1.10.3130.10 44 191 2.2E-45 T 23-04-2016 MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 Pfam PF06426 Serine acetyltransferase, N-terminal 101 166 2.6E-4 T 23-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 PANTHER PTHR23416:SF65 60 306 6.9E-91 T 23-04-2016 MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 Gene3D G3DSA:2.160.10.10 192 298 1.4E-22 T 23-04-2016 MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 PANTHER PTHR23416 60 306 6.9E-91 T 23-04-2016 MSIP34_RS10830 78d3ff0bfb271b726b1a69d7c32759aa 334 SUPERFAMILY SSF51161 122 298 4.71E-42 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Pfam PF00990 Diguanylate cyclase, GGDEF domain 486 643 1.1E-51 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 484 646 1.5E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Pfam PF00563 EAL domain 663 898 3.2E-74 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Gene3D G3DSA:3.30.450.20 349 480 1.5E-33 T 23-04-2016 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SUPERFAMILY SSF141868 663 908 1.7E-88 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SUPERFAMILY SSF55073 491 649 1.65E-50 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SMART SM00052 657 904 4.2E-114 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SMART SM00086 432 475 9.1E-10 T 23-04-2016 IPR001610 PAC motif MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Pfam PF03924 CHASE domain 92 268 1.4E-31 T 23-04-2016 IPR006189 CHASE domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SMART SM01079 89 271 8.7E-9 T 23-04-2016 IPR006189 CHASE domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Gene3D G3DSA:3.30.70.270 488 655 1.7E-58 T 23-04-2016 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SMART SM00267 475 647 1.1E-64 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Pfam PF08447 PAS fold 383 469 4.5E-19 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 PANTHER PTHR10799 341 757 1.1E-87 T 23-04-2016 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 PANTHER PTHR10799 30 43 1.1E-87 T 23-04-2016 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 Gene3D G3DSA:3.20.20.450 661 907 1.0E-96 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 PANTHER PTHR10799:SF774 341 757 1.1E-87 T 23-04-2016 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 PANTHER PTHR10799:SF774 30 43 1.1E-87 T 23-04-2016 MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 355 479 2.0E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08105 51b22ca98f426d7e47697ded223de20a 910 SUPERFAMILY SSF55785 363 477 8.9E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 PANTHER PTHR11835:SF35 1 351 8.4E-199 T 23-04-2016 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 2 346 2.1E-153 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 2 347 2.8E-137 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 351 51.474 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 Gene3D G3DSA:3.40.718.10 2 351 5.0E-130 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 SMART SM01329 2 347 3.0E-211 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 PANTHER PTHR11835 1 351 8.4E-199 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 SUPERFAMILY SSF53659 1 351 3.06E-122 T 23-04-2016 MSIP34_RS07890 d4106a72a3d6869c9cd97c7557daca69 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 PANTHER PTHR10314:SF1 53 342 2.1E-118 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 PANTHER PTHR10314:SF1 375 477 2.1E-118 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 PANTHER PTHR10314:SF1 25 36 2.1E-118 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 PANTHER PTHR10314 53 342 2.1E-118 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 PANTHER PTHR10314 375 477 2.1E-118 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 PANTHER PTHR10314 25 36 2.1E-118 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 TIGRFAM TIGR00260 thrC: threonine synthase 91 440 1.3E-72 T 23-04-2016 IPR004450 Threonine synthase-like MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 Gene3D G3DSA:3.40.50.1100 119 213 5.0E-7 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 Pfam PF14821 Threonine synthase N terminus 2 79 4.7E-28 T 23-04-2016 IPR029144 Threonine synthase, N-terminal MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 Gene3D G3DSA:3.40.50.1100 214 448 9.3E-89 T 23-04-2016 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 110 124 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 Gene3D G3DSA:3.90.1380.10 1 82 1.5E-31 T 23-04-2016 IPR029144 Threonine synthase, N-terminal MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 103 337 3.6E-11 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS04470 4f3fbcbe8b8b9f4d1009b8d7ab13a95b 477 SUPERFAMILY SSF53686 1 474 7.49E-152 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS10050 32339c8b31255f061582e21e4cf0c6f1 166 Gene3D G3DSA:3.30.530.20 26 165 9.7E-45 T 23-04-2016 IPR023393 START-like domain MSIP34_RS10050 32339c8b31255f061582e21e4cf0c6f1 166 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 26 162 4.7E-30 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase MSIP34_RS10050 32339c8b31255f061582e21e4cf0c6f1 166 PANTHER PTHR39332:SF2 18 166 1.5E-26 T 23-04-2016 MSIP34_RS10050 32339c8b31255f061582e21e4cf0c6f1 166 PANTHER PTHR39332 18 166 1.5E-26 T 23-04-2016 MSIP34_RS10050 32339c8b31255f061582e21e4cf0c6f1 166 SUPERFAMILY SSF55961 27 164 6.68E-35 T 23-04-2016 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Gene3D G3DSA:3.30.1360.120 4 120 9.5E-42 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Gene3D G3DSA:1.20.120.430 379 446 3.7E-54 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Gene3D G3DSA:1.20.120.430 121 181 3.7E-54 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Gene3D G3DSA:1.20.120.430 247 270 3.7E-54 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 342 9.6E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 446 7.5E-103 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 PANTHER PTHR11649:SF56 8 446 7.1E-152 T 23-04-2016 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 PRINTS PR00449 Transforming protein P21 ras signature 256 278 1.3E-6 T 23-04-2016 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 PRINTS PR00449 Transforming protein P21 ras signature 216 237 1.3E-6 T 23-04-2016 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 PRINTS PR00449 Transforming protein P21 ras signature 321 334 1.3E-6 T 23-04-2016 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 PANTHER PTHR11649 8 446 7.1E-152 T 23-04-2016 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Pfam PF12631 MnmE helical domain 122 443 3.8E-55 T 23-04-2016 IPR025867 MnmE, helical domain MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Pfam PF01926 50S ribosome-binding GTPase 217 331 6.4E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Gene3D G3DSA:3.40.50.300 285 371 2.6E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 446 31.804 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 SUPERFAMILY SSF52540 71 162 3.56E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 SUPERFAMILY SSF52540 196 367 3.56E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Gene3D G3DSA:3.40.50.300 210 246 1.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14170 34f9a7c0d245e507b8062d15180e81fc 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 119 1.0E-36 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Gene3D G3DSA:3.30.70.870 291 369 8.5E-27 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 SUPERFAMILY SSF54980 292 370 1.04E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 5.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 5.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 5.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 5.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 5.0E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 308.523 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 5.4E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 SUPERFAMILY SSF54980 399 493 2.4E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 595 2.8E-302 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Gene3D G3DSA:2.40.30.10 193 290 8.8E-24 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 3.2E-50 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.2E-52 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 SUPERFAMILY SSF52540 2 205 1.71E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PANTHER PTHR23115:SF175 397 595 4.2E-290 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PANTHER PTHR23115:SF175 2 373 4.2E-290 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Pfam PF00679 Elongation factor G C-terminus 399 485 1.0E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Gene3D G3DSA:3.40.50.300 2 192 3.6E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PANTHER PTHR23115 397 595 4.2E-290 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 PANTHER PTHR23115 2 373 4.2E-290 T 23-04-2016 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 Gene3D G3DSA:3.30.70.240 401 489 2.2E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 175 1.3E-17 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 SMART SM00838 398 485 0.0047 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS09020 93d4d59117bfc5d49c992bd22dd6d5c5 597 SUPERFAMILY SSF50447 165 288 1.94E-28 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 453 3.7E-8 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 PANTHER PTHR24960:SF45 261 394 1.7E-68 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 PANTHER PTHR24960:SF45 16 245 1.7E-68 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 Gene3D G3DSA:2.60.40.10 356 462 1.3E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 Gene3D G3DSA:3.30.70.20 278 319 6.0E-6 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 Pfam PF13746 4Fe-4S dicluster domain 209 321 6.7E-49 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 PANTHER PTHR24960 261 394 1.7E-68 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 PANTHER PTHR24960 16 245 1.7E-68 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 Gene3D G3DSA:1.10.1060.10 213 277 1.9E-8 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 SUPERFAMILY SSF54862 164 241 1.6E-25 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 SUPERFAMILY SSF54862 95 117 1.6E-25 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 SUPERFAMILY SSF54862 269 358 1.6E-25 T 23-04-2016 MSIP34_RS02100 fabcb63e4396ab6b87263a9bdb3cd47a 479 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 27 444 1.3E-112 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 MSIP34_RS11715 9f8e7800de7c2f17ccc996121ecf5a9c 111 SUPERFAMILY SSF46785 4 100 7.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11715 9f8e7800de7c2f17ccc996121ecf5a9c 111 Gene3D G3DSA:1.10.10.10 3 108 6.1E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11715 9f8e7800de7c2f17ccc996121ecf5a9c 111 PANTHER PTHR30432 1 110 2.9E-25 T 23-04-2016 MSIP34_RS11715 9f8e7800de7c2f17ccc996121ecf5a9c 111 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 81 1.7E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS07470 f2fc9294b42dea7677c87503bef96add 93 Gene3D G3DSA:1.10.10.60 8 87 9.4E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS07470 f2fc9294b42dea7677c87503bef96add 93 PANTHER PTHR33215:SF1 1 90 3.3E-23 T 23-04-2016 MSIP34_RS07470 f2fc9294b42dea7677c87503bef96add 93 SUPERFAMILY SSF46689 4 90 4.3E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS07470 f2fc9294b42dea7677c87503bef96add 93 Pfam PF01527 Transposase 1 71 5.6E-16 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 MSIP34_RS07470 f2fc9294b42dea7677c87503bef96add 93 PANTHER PTHR33215 1 90 3.3E-23 T 23-04-2016 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 Pfam PF00534 Glycosyl transferases group 1 299 456 5.1E-15 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 492 5.9E-169 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 PANTHER PTHR12526 3 492 6.5E-133 T 23-04-2016 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 Pfam PF08323 Starch synthase catalytic domain 7 250 1.3E-75 T 23-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 Gene3D G3DSA:3.40.50.2000 264 474 5.9E-74 T 23-04-2016 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 Hamap MF_00484 Glycogen synthase [glgA]. 6 492 43.39 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 PANTHER PTHR12526:SF295 3 492 6.5E-133 T 23-04-2016 MSIP34_RS07305 5e1381168b073543a17a3416ee9202d3 493 SUPERFAMILY SSF53756 6 492 1.37E-117 T 23-04-2016 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 Pfam PF00487 Fatty acid desaturase 59 286 1.8E-18 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PANTHER PTHR11351:SF34 13 303 7.5E-117 T 23-04-2016 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PRINTS PR00075 Fatty acid desaturase family 1 signature 117 146 7.8E-18 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PRINTS PR00075 Fatty acid desaturase family 1 signature 255 269 7.8E-18 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PRINTS PR00075 Fatty acid desaturase family 1 signature 79 99 7.8E-18 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PRINTS PR00075 Fatty acid desaturase family 1 signature 34 54 7.8E-18 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PRINTS PR00075 Fatty acid desaturase family 1 signature 212 233 7.8E-18 T 23-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 MSIP34_RS06635 4a0fe372eb84d400431926fd051ddf49 317 PANTHER PTHR11351 13 303 7.5E-117 T 23-04-2016 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 Gene3D G3DSA:3.40.50.300 807 863 7.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 Gene3D G3DSA:3.40.50.300 1012 1165 7.2E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1162 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1164 21.513 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1155 8.6E-57 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 PANTHER PTHR18937 404 1168 1.7E-252 T 23-04-2016 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 PANTHER PTHR18937:SF261 2 377 1.7E-252 T 23-04-2016 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 PANTHER PTHR18937:SF261 404 1168 1.7E-252 T 23-04-2016 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 Gene3D G3DSA:3.40.50.300 2 235 3.9E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 PIRSF PIRSF005719 1 1170 1.4E-242 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 SUPERFAMILY SSF52540 1048 1161 1.38E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 SUPERFAMILY SSF52540 305 336 1.38E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 SUPERFAMILY SSF52540 2 169 1.38E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 PANTHER PTHR18937 2 377 1.7E-252 T 23-04-2016 MSIP34_RS06715 4838546fcd843aa76147024baf037bc3 1173 SUPERFAMILY SSF75553 491 674 1.57E-6 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 SUPERFAMILY SSF55073 343 501 1.49E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 SUPERFAMILY SSF141868 515 778 1.83E-86 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 SMART SM00267 327 499 3.9E-67 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Gene3D G3DSA:3.40.190.10 252 288 1.0E-10 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Gene3D G3DSA:3.40.190.10 73 154 1.0E-10 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 336 498 2.5E-44 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Gene3D G3DSA:3.30.70.270 340 505 1.6E-60 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 PANTHER PTHR10799 311 589 8.6E-83 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 PANTHER PTHR10799 742 761 8.6E-83 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Gene3D G3DSA:3.40.190.10 155 238 1.1E-10 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 PANTHER PTHR10799:SF710 311 589 8.6E-83 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 PANTHER PTHR10799:SF710 742 761 8.6E-83 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Gene3D G3DSA:3.20.20.450 512 777 1.9E-93 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 SMART SM00062 76 291 2.0E-11 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 SUPERFAMILY SSF53850 68 287 5.43E-31 T 23-04-2016 MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 SMART SM00052 509 769 2.8E-108 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 77 277 1.2E-20 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Pfam PF00990 Diguanylate cyclase, GGDEF domain 338 495 2.6E-53 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS09910 ae07a9eef178a7b28c9fc487f78e9e5d 783 Pfam PF00563 EAL domain 515 763 2.4E-69 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 264 1.7E-73 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 SUPERFAMILY SSF52540 2 632 1.39E-158 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 PANTHER PTHR11070 1 665 3.0E-297 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Gene3D G3DSA:3.40.50.300 2 106 4.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Gene3D G3DSA:3.40.50.300 181 278 4.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 PANTHER PTHR11070:SF19 1 665 3.0E-297 T 23-04-2016 MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Gene3D G3DSA:1.10.10.160 110 180 1.4E-17 T 23-04-2016 IPR013986 DExx box DNA helicase domain MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 661 40.437 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Gene3D G3DSA:1.10.486.10 382 531 2.4E-37 T 23-04-2016 MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Pfam PF13361 UvrD-like helicase C-terminal domain 270 607 1.1E-65 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Gene3D G3DSA:3.40.50.300 279 381 1.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05430 fa53e9ce40cddad1d579a1e2009f6fc7 665 Gene3D G3DSA:3.40.50.300 544 633 1.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 439 203.276 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 SMART SM00788 5 432 1.5E-276 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 SUPERFAMILY SSF52540 4 437 2.12E-168 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 Gene3D G3DSA:3.90.170.10 271 433 3.2E-63 T 23-04-2016 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 Gene3D G3DSA:1.10.300.10 109 200 2.5E-32 T 23-04-2016 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 Gene3D G3DSA:3.40.440.10 201 270 1.7E-66 T 23-04-2016 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 Gene3D G3DSA:3.40.440.10 4 99 1.7E-66 T 23-04-2016 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 PANTHER PTHR11846 2 436 7.9E-223 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 437 3.4E-167 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 12 19 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 Pfam PF00709 Adenylosuccinate synthetase 6 431 1.6E-166 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 MSIP34_RS08545 e0fc27de58c31adb21492c52820cd1b0 439 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 137 148 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 MSIP34_RS12220 bd4a0fba2f70dff98ac4d98b74dcc6b9 155 Pfam PF00583 Acetyltransferase (GNAT) family 65 144 1.0E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS12220 bd4a0fba2f70dff98ac4d98b74dcc6b9 155 Gene3D G3DSA:3.40.630.30 4 147 4.1E-28 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS12220 bd4a0fba2f70dff98ac4d98b74dcc6b9 155 PANTHER PTHR23091 1 146 1.1E-19 T 23-04-2016 MSIP34_RS12220 bd4a0fba2f70dff98ac4d98b74dcc6b9 155 SUPERFAMILY SSF55729 8 146 5.32E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS09670 774e6eac0a70c0ce0e1f8d24b7216839 337 Gene3D G3DSA:3.40.50.2000 138 310 3.9E-20 T 23-04-2016 MSIP34_RS09670 774e6eac0a70c0ce0e1f8d24b7216839 337 SUPERFAMILY SSF53756 1 334 1.26E-66 T 23-04-2016 MSIP34_RS09670 774e6eac0a70c0ce0e1f8d24b7216839 337 Pfam PF13439 Glycosyltransferase Family 4 13 146 1.2E-18 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS09670 774e6eac0a70c0ce0e1f8d24b7216839 337 PANTHER PTHR12526 1 334 2.4E-45 T 23-04-2016 MSIP34_RS09670 774e6eac0a70c0ce0e1f8d24b7216839 337 Pfam PF00534 Glycosyl transferases group 1 157 291 4.2E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Gene3D G3DSA:3.30.310.50 375 449 1.1E-20 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Gene3D G3DSA:3.40.120.10 3 158 6.1E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 SUPERFAMILY SSF53738 2 187 1.06E-49 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 141 4.8E-42 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 3.6E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 3.6E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 255 3.6E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 SUPERFAMILY SSF55957 364 450 2.35E-23 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 369 9.6E-31 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 PANTHER PTHR22573:SF15 3 451 2.1E-165 T 23-04-2016 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 SUPERFAMILY SSF53738 264 370 9.42E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Gene3D G3DSA:3.40.120.10 257 372 4.5E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 446 5.2E-17 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 SUPERFAMILY SSF53738 162 262 1.61E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 450 48.661 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 PANTHER PTHR22573 3 451 2.1E-165 T 23-04-2016 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 448 1.3E-194 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 260 2.3E-19 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09465 b6df520228943070ddacec2c4f987324 452 Gene3D G3DSA:3.40.120.10 182 256 2.9E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 MSIP34_RS09385 94e8ae22356d1b39ad03c9de5b1c010f 467 SUPERFAMILY SSF56935 80 467 1.04E-7 T 23-04-2016 MSIP34_RS09385 94e8ae22356d1b39ad03c9de5b1c010f 467 Pfam PF16930 Putative porin 100 275 2.3E-19 T 23-04-2016 IPR032638 Putative bacterial porin MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 Pfam PF12833 Helix-turn-helix domain 246 325 1.5E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 Pfam PF14525 AraC-binding-like domain 35 207 4.6E-20 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 SMART SM00342 240 325 3.8E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 294 309 4.6E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 309 325 4.6E-7 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 SUPERFAMILY SSF46689 289 328 3.45E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 Gene3D G3DSA:1.10.10.60 274 329 4.0E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 SUPERFAMILY SSF51182 96 144 2.16E-5 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 Gene3D G3DSA:2.60.120.10 96 146 3.2E-5 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 PANTHER PTHR11019 56 333 7.5E-28 T 23-04-2016 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 321 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MSIP34_RS09455 66d7072c87ff3ab3ed6b614821c97db0 337 PANTHER PTHR11019:SF50 56 333 7.5E-28 T 23-04-2016 MSIP34_RS05405 e53a9656c625d97eae33aca46b2b9f90 195 Pfam PF02669 K+-transporting ATPase, c chain 6 186 9.1E-72 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MSIP34_RS05405 e53a9656c625d97eae33aca46b2b9f90 195 PIRSF PIRSF001296 1 192 2.2E-74 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MSIP34_RS05405 e53a9656c625d97eae33aca46b2b9f90 195 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 188 35.069 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MSIP34_RS05405 e53a9656c625d97eae33aca46b2b9f90 195 PANTHER PTHR30042 1 195 1.4E-87 T 23-04-2016 MSIP34_RS05405 e53a9656c625d97eae33aca46b2b9f90 195 PANTHER PTHR30042:SF2 1 195 1.4E-87 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MSIP34_RS05405 e53a9656c625d97eae33aca46b2b9f90 195 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 3.5E-68 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 MSIP34_RS04185 fc1a48e3c91d94ebd62c9fe39a8c7755 221 Gene3D G3DSA:1.10.287.500 42 173 3.8E-47 T 23-04-2016 MSIP34_RS04185 fc1a48e3c91d94ebd62c9fe39a8c7755 221 PANTHER PTHR22617 41 221 2.0E-52 T 23-04-2016 MSIP34_RS04185 fc1a48e3c91d94ebd62c9fe39a8c7755 221 Pfam PF04344 Chemotaxis phosphatase, CheZ 22 221 2.4E-75 T 23-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- MSIP34_RS04185 fc1a48e3c91d94ebd62c9fe39a8c7755 221 PIRSF PIRSF002884 2 221 1.1E-70 T 23-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- MSIP34_RS04185 fc1a48e3c91d94ebd62c9fe39a8c7755 221 PANTHER PTHR22617:SF32 41 221 2.0E-52 T 23-04-2016 MSIP34_RS04185 fc1a48e3c91d94ebd62c9fe39a8c7755 221 SUPERFAMILY SSF75708 19 220 4.97E-60 T 23-04-2016 MSIP34_RS09845 83aff0f440e259bcd5c1608160a619c5 365 Gene3D G3DSA:3.20.20.30 6 356 1.2E-98 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09845 83aff0f440e259bcd5c1608160a619c5 365 TIGRFAM TIGR04021 LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG 10 358 9.1E-187 T 23-04-2016 IPR024014 Dimethyl sulphone monooxygenase SfnG MSIP34_RS09845 83aff0f440e259bcd5c1608160a619c5 365 SUPERFAMILY SSF51679 8 356 5.63E-88 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09845 83aff0f440e259bcd5c1608160a619c5 365 Pfam PF00296 Luciferase-like monooxygenase 11 329 7.2E-74 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09845 83aff0f440e259bcd5c1608160a619c5 365 PANTHER PTHR30011 5 356 6.2E-183 T 23-04-2016 MSIP34_RS09845 83aff0f440e259bcd5c1608160a619c5 365 PANTHER PTHR30011:SF21 5 356 6.2E-183 T 23-04-2016 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 Gene3D G3DSA:3.40.50.1380 3 189 3.9E-82 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 SUPERFAMILY SSF52335 4 195 8.77E-69 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 SMART SM00851 16 131 8.9E-62 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 Pfam PF02142 MGS-like domain 16 130 6.4E-28 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 PANTHER PTHR11692:SF2 2 528 3.6E-301 T 23-04-2016 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 Gene3D G3DSA:3.40.140.20 246 360 1.9E-49 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 PIRSF PIRSF000414 1 528 3.1E-218 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 459 4.7E-118 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 PANTHER PTHR11692 2 528 3.6E-301 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 528 44.573 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 5 528 1.2E-218 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 Gene3D G3DSA:3.40.140.20 376 518 4.2E-57 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 SMART SM00798 136 460 5.4E-199 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 MSIP34_RS01955 92ed259be960079cc05e62460f35850d 528 SUPERFAMILY SSF53927 214 528 6.62E-128 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 Pfam PF00916 Sulfate permease family 20 383 1.3E-85 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 TIGRFAM TIGR00815 sulP: sulfate permease 20 530 2.2E-115 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 SUPERFAMILY SSF52091 436 526 1.22E-17 T 23-04-2016 IPR002645 STAS domain MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 PANTHER PTHR11814 15 536 2.6E-242 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 Pfam PF01740 STAS domain 439 526 6.3E-14 T 23-04-2016 IPR002645 STAS domain MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 PANTHER PTHR11814:SF112 15 536 2.6E-242 T 23-04-2016 MSIP34_RS13095 4c1f39164ebbe7b87b520ff1fcaadcc0 538 Gene3D G3DSA:3.30.750.24 438 525 8.5E-18 T 23-04-2016 IPR002645 STAS domain MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 Gene3D G3DSA:1.20.1440.90 290 415 2.0E-22 T 23-04-2016 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 147 160 3.0E-51 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 757 783 3.0E-51 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 579 599 3.0E-51 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 412 432 3.0E-51 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 261 276 3.0E-51 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 621 650 3.0E-51 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 13 933 18.321 T 23-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 SUPERFAMILY SSF51621 21 933 2.98E-281 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PANTHER PTHR30523 14 933 9.5E-302 T 23-04-2016 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 148 159 - T 23-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 Pfam PF00311 Phosphoenolpyruvate carboxylase 144 933 5.6E-277 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 581 593 - T 23-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 MSIP34_RS07295 56f127a84346fbece93e40bb630b3b21 933 PANTHER PTHR30523:SF0 14 933 9.5E-302 T 23-04-2016 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Gene3D G3DSA:1.10.8.60 343 427 1.8E-36 T 23-04-2016 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 SUPERFAMILY SSF52540 159 548 8.38E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Gene3D G3DSA:1.10.8.60 780 859 4.6E-29 T 23-04-2016 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Gene3D G3DSA:1.10.1780.10 1 147 7.9E-44 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Gene3D G3DSA:3.40.50.300 159 342 1.9E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 SUPERFAMILY SSF52540 550 855 1.76E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 7.1E-9 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 5.9E-12 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 SUPERFAMILY SSF81923 4 155 1.28E-38 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 SMART SM00382 198 343 7.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 SMART SM00382 601 771 9.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 763 9.3E-57 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 7.0E-26 T 23-04-2016 IPR019489 Clp ATPase, C-terminal MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Gene3D G3DSA:3.40.50.300 554 779 6.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 PANTHER PTHR11638 1 858 0.0 T 23-04-2016 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 SMART SM01086 769 858 3.7E-36 T 23-04-2016 IPR019489 Clp ATPase, C-terminal MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 3.1E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS02760 18136af88af2a806082c05b95302adb3 861 PANTHER PTHR11638:SF18 1 858 0.0 T 23-04-2016 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 Pfam PF00593 TonB dependent receptor 467 687 4.5E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 PANTHER PTHR32552 14 39 7.0E-124 T 23-04-2016 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 PANTHER PTHR32552 60 700 7.0E-124 T 23-04-2016 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 PANTHER PTHR32552:SF10 14 39 7.0E-124 T 23-04-2016 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 PANTHER PTHR32552:SF10 60 700 7.0E-124 T 23-04-2016 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 Gene3D G3DSA:2.170.130.10 48 170 6.6E-35 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 SUPERFAMILY SSF56935 24 700 1.62E-129 T 23-04-2016 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 164 2.7E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 Gene3D G3DSA:2.40.170.20 178 700 1.5E-137 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05380 a4fcc34e61c76dff36c262bebc36c9bd 700 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 700 1.0E-96 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 6.01E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 6.01E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 Gene3D G3DSA:1.10.357.10 2 184 6.4E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 47 1.7E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 PANTHER PTHR30055 1 184 3.3E-21 T 23-04-2016 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 SUPERFAMILY SSF46689 2 72 2.64E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 PANTHER PTHR30055:SF76 1 184 3.3E-21 T 23-04-2016 MSIP34_RS08950 c6290523922cc16beea6826c6275fc27 193 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 132 182 1.6E-4 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 260 1.9E-15 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 1.9E-15 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 146 167 1.9E-15 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 71 96 1.9E-15 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 212 233 1.9E-15 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PANTHER PTHR22773:SF67 1 343 1.5E-82 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 PANTHER PTHR22773 1 343 1.5E-82 T 23-04-2016 MSIP34_RS10525 4878afec0213fb7bd1b187a60942b6e5 517 Pfam PF00361 Proton-conducting membrane transporter 122 343 1.0E-33 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1065 13.545 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SMART SM01096 419 542 2.3E-78 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SUPERFAMILY SSF52335 930 1065 1.7E-40 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Pfam PF02142 MGS-like domain 951 1036 1.6E-18 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SUPERFAMILY SSF56059 128 401 1.77E-109 T 23-04-2016 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.40.50.20 534 657 1.9E-62 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 1045 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SUPERFAMILY SSF48108 396 549 9.29E-55 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SMART SM00851 950 1036 2.9E-32 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PANTHER PTHR11405 1 1065 0.0 T 23-04-2016 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SUPERFAMILY SSF52440 551 670 4.75E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.1E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 422 542 7.9E-42 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:1.10.1030.10 400 533 1.5E-54 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SUPERFAMILY SSF52440 2 127 4.6E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 PANTHER PTHR11405:SF5 1 1065 0.0 T 23-04-2016 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.30.470.20 740 927 3.4E-79 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.30.470.20 201 399 4.2E-77 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.40.50.1380 932 1066 2.5E-43 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.30.1490.20 681 739 6.2E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.256 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 SUPERFAMILY SSF56059 668 928 1.33E-105 T 23-04-2016 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 870 1.3E-37 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.1E-72 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.30.1490.20 143 200 8.0E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS09500 6d88afae8f7526108f95b42b76383b13 1069 Gene3D G3DSA:3.40.50.20 3 108 4.4E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 SUPERFAMILY SSF50249 49 125 1.24E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Gene3D G3DSA:3.40.50.300 132 418 2.9E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 246.244 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 SMART SM00382 170 356 8.8E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 SUPERFAMILY SSF52540 90 371 6.95E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Gene3D G3DSA:1.10.720.10 1 46 1.6E-19 T 23-04-2016 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 SMART SM00357 52 118 5.8E-18 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 SUPERFAMILY SSF68912 1 46 6.28E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 PANTHER PTHR15184 78 141 1.1E-188 T 23-04-2016 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 PANTHER PTHR15184 160 418 1.1E-188 T 23-04-2016 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 5.9E-25 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 SMART SM00959 5 47 1.1E-17 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 46 3.5E-16 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Gene3D G3DSA:2.40.50.140 49 117 3.8E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.0E-31 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.2E-212 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 PANTHER PTHR15184:SF34 78 141 1.1E-188 T 23-04-2016 MSIP34_RS11680 08f6476e3ff2b0e5fc0441ae9f74e4ee 419 PANTHER PTHR15184:SF34 160 418 1.1E-188 T 23-04-2016 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PRINTS PR01033 Phytochrome signature 336 356 7.6E-15 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PRINTS PR01033 Phytochrome signature 453 471 7.6E-15 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PRINTS PR01033 Phytochrome signature 419 438 7.6E-15 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PRINTS PR01033 Phytochrome signature 154 173 7.6E-15 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PRINTS PR01033 Phytochrome signature 238 259 7.6E-15 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Pfam PF01590 GAF domain 139 282 5.3E-17 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 717 9.9E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SMART SM00065 139 310 2.1E-13 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SUPERFAMILY SSF55874 554 718 5.11E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SMART SM00388 500 564 4.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Pfam PF00360 Phytochrome region 318 492 4.4E-40 T 23-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SUPERFAMILY SSF55785 5 114 6.8E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Gene3D G3DSA:1.10.287.130 495 549 8.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Gene3D G3DSA:3.30.450.40 128 314 4.7E-15 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Pfam PF00512 His Kinase A (phospho-acceptor) domain 503 564 3.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SUPERFAMILY SSF47384 493 564 2.75E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SMART SM00387 608 719 2.4E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SUPERFAMILY SSF55781 289 488 4.07E-41 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PANTHER PTHR24423 136 716 1.7E-92 T 23-04-2016 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Gene3D G3DSA:3.30.565.10 550 717 3.1E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 SUPERFAMILY SSF55781 128 307 3.03E-56 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 Pfam PF08446 PAS fold 10 113 6.7E-9 T 23-04-2016 IPR013654 PAS fold-2 GO:0006355 MSIP34_RS08080 16165ad3ec5480d8fc235196f032ee53 730 PANTHER PTHR24423:SF540 136 716 1.7E-92 T 23-04-2016 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 93 175 6.7E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 PANTHER PTHR35008 94 214 4.3E-16 T 23-04-2016 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 PRINTS PR00605 Class IC cytochrome C signature 100 111 1.3E-7 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 PRINTS PR00605 Class IC cytochrome C signature 153 175 1.3E-7 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 Gene3D G3DSA:1.10.760.10 93 211 1.2E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 PANTHER PTHR35008:SF3 94 214 4.3E-16 T 23-04-2016 MSIP34_RS12855 65190f93ee132a40dd8b1ae84649737d 218 SUPERFAMILY SSF46626 94 197 1.86E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 SUPERFAMILY SSF51011 622 724 5.99E-35 T 23-04-2016 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 121 204 5.4E-24 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 SUPERFAMILY SSF51445 176 614 1.22E-117 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Pfam PF00128 Alpha amylase, catalytic domain 273 343 7.6E-12 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Gene3D G3DSA:3.20.20.80 236 609 1.7E-93 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 SMART SM00642 248 599 1.2E-5 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 106 722 1.1E-281 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 PANTHER PTHR10357 46 723 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 SUPERFAMILY SSF81296 17 113 1.74E-14 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Gene3D G3DSA:2.60.40.1180 622 724 1.3E-36 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 SUPERFAMILY SSF81296 134 193 1.61E-11 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 PANTHER PTHR10357:SF160 46 723 0.0 T 23-04-2016 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 97 724 44.222 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Gene3D G3DSA:2.60.40.10 14 102 3.0E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Gene3D G3DSA:2.60.40.10 109 217 1.3E-34 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 PIRSF PIRSF000463 6 726 1.4E-292 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06475 0382c580c8ed3f02019aff52af96d711 726 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 626 723 9.2E-23 T 23-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 PANTHER PTHR24567:SF28 18 228 7.3E-29 T 23-04-2016 MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 PANTHER PTHR24567 18 228 7.3E-29 T 23-04-2016 MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 Pfam PF13545 Crp-like helix-turn-helix domain 151 224 1.4E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 SUPERFAMILY SSF51206 6 143 3.67E-22 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 Gene3D G3DSA:1.10.10.10 148 227 2.4E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 SUPERFAMILY SSF46785 148 227 1.22E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 SMART SM00419 171 219 4.8E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 SMART SM00100 13 131 0.0017 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 Gene3D G3DSA:2.60.120.10 8 132 1.7E-15 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS08065 0f472268b4449b33320f6b6938b5a5dd 241 Pfam PF00027 Cyclic nucleotide-binding domain 33 117 6.9E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS09240 7a53bce0b6a8b9a9e94743af8666f653 282 PANTHER PTHR22916 1 276 6.4E-36 T 23-04-2016 MSIP34_RS09240 7a53bce0b6a8b9a9e94743af8666f653 282 Gene3D G3DSA:3.90.550.10 1 237 4.0E-40 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09240 7a53bce0b6a8b9a9e94743af8666f653 282 SUPERFAMILY SSF53448 2 202 1.03E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09240 7a53bce0b6a8b9a9e94743af8666f653 282 Pfam PF00535 Glycosyl transferase family 2 4 107 1.5E-27 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1331 1456 5.36E-15 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 745 863 9.63E-15 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1523 1620 1.31E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 1170 1356 6.2E-29 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 1557 1722 1.0E-28 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 1364 1531 1.1E-24 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 1737 1820 1.3E-6 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 383 557 6.8E-24 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 564 771 1.4E-25 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 772 968 1.1E-25 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Gene3D G3DSA:2.150.10.10 969 1169 5.2E-26 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1132 1258 5.76E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1733 1829 6.15E-9 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1629 1720 4.19E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 788 806 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1672 1690 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1288 1306 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1188 1206 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 988 1006 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1388 1406 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 888 906 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 688 706 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1088 1106 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 588 606 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 PRINTS PR00313 NodO calcium binding signature 710 719 5.3E-9 T 23-04-2016 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 PRINTS PR00313 NodO calcium binding signature 692 700 5.3E-9 T 23-04-2016 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 PRINTS PR00313 NodO calcium binding signature 592 600 5.3E-9 T 23-04-2016 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 PRINTS PR00313 NodO calcium binding signature 489 500 5.3E-9 T 23-04-2016 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 380 535 2.62E-24 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 531 659 1.96E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 909 1059 5.31E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 647 758 9.42E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1244 1339 7.72E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1431 1528 3.92E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 SUPERFAMILY SSF51120 1050 1159 2.75E-16 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1666 1683 8.2E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1685 1700 0.49 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1383 1399 0.0028 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1001 1016 12.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1762 1773 3.6 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 682 699 0.003 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1400 1416 2.8 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 401 416 0.34 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1082 1099 0.0012 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1201 1216 0.029 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1474 1491 0.015 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 510 526 11.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1282 1299 0.0057 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 910 926 4.7 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 226 238 6.5 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1584 1600 0.23 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1182 1199 0.0077 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 601 616 8.7 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 882 899 0.0011 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 782 799 0.003 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 810 826 2.1 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 701 716 26.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 383 399 0.012 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1301 1316 0.11 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 482 499 0.0014 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1493 1508 0.32 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1101 1116 0.16 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 582 599 8.2E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1566 1583 0.015 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14670 e4acb15b02003224abf6766c80650efa 1900 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 982 999 8.2E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 Gene3D G3DSA:3.40.1280.10 1 153 6.8E-68 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.041 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 Pfam PF00588 SpoU rRNA Methylase family 3 142 9.8E-35 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 PANTHER PTHR12029:SF31 1 153 6.2E-76 T 23-04-2016 MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 PANTHER PTHR12029 1 153 6.2E-76 T 23-04-2016 MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 PIRSF PIRSF029256 1 154 2.6E-68 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 SUPERFAMILY SSF75217 2 152 1.77E-46 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS02835 ce8ec385838a8bdb0c2bfaec1fe42b12 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 1.9E-63 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 MSIP34_RS07340 ca854bcbb8ebe89bba3207d48c07e645 301 SUPERFAMILY SSF51735 5 295 1.59E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07340 ca854bcbb8ebe89bba3207d48c07e645 301 PANTHER PTHR10491:SF4 1 295 3.9E-96 T 23-04-2016 MSIP34_RS07340 ca854bcbb8ebe89bba3207d48c07e645 301 Pfam PF04321 RmlD substrate binding domain 5 295 2.3E-106 T 23-04-2016 IPR029903 RmlD-like substrate binding domain MSIP34_RS07340 ca854bcbb8ebe89bba3207d48c07e645 301 Gene3D G3DSA:3.40.50.720 5 230 2.9E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07340 ca854bcbb8ebe89bba3207d48c07e645 301 PANTHER PTHR10491 1 295 3.9E-96 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family MSIP34_RS07340 ca854bcbb8ebe89bba3207d48c07e645 301 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 5 295 6.3E-104 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family MSIP34_RS01195 23384ec8d74b05c3c171a6ac1e2e85de 181 Gene3D G3DSA:3.40.80.10 13 180 1.2E-65 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 MSIP34_RS01195 23384ec8d74b05c3c171a6ac1e2e85de 181 PANTHER PTHR30417:SF4 22 180 5.5E-64 T 23-04-2016 MSIP34_RS01195 23384ec8d74b05c3c171a6ac1e2e85de 181 PANTHER PTHR30417 22 180 5.5E-64 T 23-04-2016 MSIP34_RS01195 23384ec8d74b05c3c171a6ac1e2e85de 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 35 173 8.9E-21 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 MSIP34_RS01195 23384ec8d74b05c3c171a6ac1e2e85de 181 SUPERFAMILY SSF55846 12 180 8.64E-63 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 MSIP34_RS01195 23384ec8d74b05c3c171a6ac1e2e85de 181 SMART SM00644 24 172 1.1E-50 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 MSIP34_RS10315 1e2d7a3b1f499684a1849068c5c527a8 647 SUPERFAMILY SSF52540 86 470 7.75E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10315 1e2d7a3b1f499684a1849068c5c527a8 647 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 83 472 4.3E-44 T 23-04-2016 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain MSIP34_RS10315 1e2d7a3b1f499684a1849068c5c527a8 647 Gene3D G3DSA:3.40.50.300 292 471 3.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10315 1e2d7a3b1f499684a1849068c5c527a8 647 Gene3D G3DSA:3.40.50.300 92 156 3.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 SMART SM00926 234 288 1.4E-15 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Pfam PF01568 Molydopterin dinucleotide binding domain 806 910 1.9E-28 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:3.30.70.20 214 246 1.4E-4 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 SUPERFAMILY SSF50692 773 916 1.13E-43 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 PANTHER PTHR11615 19 67 2.3E-235 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 PANTHER PTHR11615 233 934 2.3E-235 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Pfam PF13187 4Fe-4S dicluster domain 164 220 2.5E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 SMART SM00929 99 139 3.5E-20 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:3.40.228.10 369 560 2.2E-53 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:3.10.20.30 12 71 4.9E-8 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 SUPERFAMILY SSF54862 91 228 6.28E-38 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 PANTHER PTHR11615:SF112 19 67 2.3E-235 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 PANTHER PTHR11615:SF112 233 934 2.3E-235 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 235 286 4.6E-15 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 99 138 2.9E-17 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Pfam PF00384 Molybdopterin oxidoreductase 291 722 7.2E-73 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 SUPERFAMILY SSF54292 17 90 1.29E-17 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 844 871 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 92 3.0E-23 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 239 914 2.6E-275 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 SUPERFAMILY SSF53706 234 757 2.49E-182 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:3.30.70.20 109 213 8.5E-15 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 165 176 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 207 218 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:2.40.40.20 765 917 5.3E-44 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 PIRSF PIRSF036643 13 947 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:3.40.50.740 291 368 9.3E-85 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:3.40.50.740 561 764 9.3E-85 T 23-04-2016 MSIP34_RS06005 347d3ba2bcca90a6a5abc7d9653c2167 948 Gene3D G3DSA:2.20.25.90 247 289 1.4E-18 T 23-04-2016 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 Pfam PF00815 Histidinol dehydrogenase 26 430 7.9E-168 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 429 2.6E-160 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PIRSF PIRSF000099 2 432 1.0E-159 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 Gene3D G3DSA:3.40.50.1980 29 242 1.1E-81 T 23-04-2016 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 232 264 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 139 165 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 203 228 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 7.3E-85 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 SUPERFAMILY SSF53720 29 430 4.12E-89 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 PANTHER PTHR21256 1 432 2.3E-199 T 23-04-2016 MSIP34_RS01385 8f7f3f2f83c82ccb418637674f0355ea 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 430 41.043 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 Gene3D G3DSA:1.10.155.10 10 83 1.3E-29 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 Gene3D G3DSA:3.40.50.150 84 274 2.1E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 SUPERFAMILY SSF47757 10 84 1.7E-21 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PANTHER PTHR24422:SF13 10 276 6.7E-110 T 23-04-2016 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 SMART SM00138 17 277 1.5E-91 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PANTHER PTHR24422 10 276 6.7E-110 T 23-04-2016 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PIRSF PIRSF000410 1 278 6.9E-92 T 23-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 Pfam PF01739 CheR methyltransferase, SAM binding domain 85 267 2.5E-54 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PRINTS PR00996 Glutamate methyltransferase family signature 111 131 5.4E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PRINTS PR00996 Glutamate methyltransferase family signature 78 90 5.4E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PRINTS PR00996 Glutamate methyltransferase family signature 236 259 5.4E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PRINTS PR00996 Glutamate methyltransferase family signature 217 231 5.4E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 5.4E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 5.4E-39 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 SUPERFAMILY SSF53335 85 274 8.76E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04165 50bbf1f05f3098f87447218d4e2a1e4f 297 Pfam PF03705 CheR methyltransferase, all-alpha domain 18 69 3.0E-17 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 SUPERFAMILY SSF54686 1 134 9.16E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.9E-46 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.413 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.6E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.6E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.6E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.6E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.7E-57 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 PANTHER PTHR12220 1 134 1.0E-69 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 MSIP34_RS01615 3651743000edf3749653548067dd7cc2 138 Gene3D G3DSA:3.90.1170.10 23 134 8.0E-51 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 PANTHER PTHR10357 3 578 2.7E-283 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 PANTHER PTHR10357 603 676 2.7E-283 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 SUPERFAMILY SSF81296 7 144 4.0E-45 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 Pfam PF00128 Alpha amylase, catalytic domain 193 276 7.6E-6 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 SMART SM00642 186 567 8.4E-8 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 Gene3D G3DSA:2.60.40.10 6 158 4.5E-53 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 680 8.2E-298 T 23-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 Gene3D G3DSA:2.60.40.1180 586 678 1.2E-15 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 SUPERFAMILY SSF51445 140 472 1.36E-114 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 SUPERFAMILY SSF51445 501 574 1.36E-114 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 13 98 4.4E-20 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 PANTHER PTHR10357:SF74 3 578 2.7E-283 T 23-04-2016 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 PANTHER PTHR10357:SF74 603 676 2.7E-283 T 23-04-2016 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 Gene3D G3DSA:3.20.20.80 159 575 5.0E-106 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS03290 6519bd5d62492c6074e4b675cbc22d97 684 SUPERFAMILY SSF51011 586 679 2.23E-14 T 23-04-2016 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 Pfam PF00510 Cytochrome c oxidase subunit III 127 291 1.4E-49 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 Pfam PF00510 Cytochrome c oxidase subunit III 9 119 6.2E-13 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 Gene3D G3DSA:1.10.287.70 4 71 1.4E-14 T 23-04-2016 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 SUPERFAMILY SSF81452 151 292 2.62E-77 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 SUPERFAMILY SSF81452 5 114 2.62E-77 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 PANTHER PTHR11403:SF0 1 116 6.4E-88 T 23-04-2016 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 PANTHER PTHR11403:SF0 144 292 6.4E-88 T 23-04-2016 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 PANTHER PTHR11403 1 116 6.4E-88 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 PANTHER PTHR11403 144 292 6.4E-88 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 MSIP34_RS06175 8acd0abd554eec9d00448ca3b502f60b 292 Gene3D G3DSA:1.20.120.80 77 292 1.3E-65 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 2.9E-78 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 SUPERFAMILY SSF51246 330 447 8.89E-44 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 Gene3D G3DSA:3.30.1490.20 129 200 7.6E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 Gene3D G3DSA:3.40.50.20 2 128 7.6E-52 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 5.0E-40 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 SMART SM00878 335 441 1.3E-61 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 SUPERFAMILY SSF56059 82 347 1.94E-68 T 23-04-2016 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 Gene3D G3DSA:3.30.470.20 204 447 2.8E-98 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 PANTHER PTHR18866 1 472 2.2E-292 T 23-04-2016 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 SUPERFAMILY SSF52440 1 112 4.6E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 444 1.0E-196 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 MSIP34_RS07075 d6c3fa5ce85325facb3e817803f7f2c0 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 2.3E-43 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain MSIP34_RS05815 f979b7ebd414cdb77bcd5ec6a689d3c3 212 Pfam PF02734 DAK2 domain 31 204 9.1E-48 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 MSIP34_RS05815 f979b7ebd414cdb77bcd5ec6a689d3c3 212 PANTHER PTHR28629 4 209 8.6E-52 T 23-04-2016 MSIP34_RS05815 f979b7ebd414cdb77bcd5ec6a689d3c3 212 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 205 8.3E-58 T 23-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- MSIP34_RS05815 f979b7ebd414cdb77bcd5ec6a689d3c3 212 SMART SM01120 30 205 4.9E-60 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 MSIP34_RS05815 f979b7ebd414cdb77bcd5ec6a689d3c3 212 SUPERFAMILY SSF101473 3 206 1.06E-47 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.3E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.3E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 1.3E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 1.3E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.3E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 Gene3D G3DSA:3.40.50.1370 141 287 2.7E-58 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PANTHER PTHR11405:SF1 1 300 1.9E-133 T 23-04-2016 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 2.3E-48 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 298 1.6E-50 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 Gene3D G3DSA:3.40.50.1370 2 140 1.2E-54 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 301 76.263 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.2E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.2E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 1.2E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.2E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 PANTHER PTHR11405 1 300 1.9E-133 T 23-04-2016 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 SUPERFAMILY SSF53671 2 300 1.57E-103 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS07935 b66f5f2d3dec26e909735550ebd8cfe4 305 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 300 5.3E-109 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 MSIP34_RS10865 755ca0b29e2e3a441b21ba7b20cfa615 142 Pfam PF04143 Sulphur transport 9 132 7.3E-10 T 23-04-2016 IPR007272 Sulphur transport domain MSIP34_RS10865 755ca0b29e2e3a441b21ba7b20cfa615 142 PANTHER PTHR30574:SF1 3 140 6.6E-28 T 23-04-2016 MSIP34_RS10865 755ca0b29e2e3a441b21ba7b20cfa615 142 PANTHER PTHR30574 3 140 6.6E-28 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 SUPERFAMILY SSF53790 214 459 2.22E-84 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Pfam PF14824 Sirohaem biosynthesis protein central 121 145 3.4E-6 T 23-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 PANTHER PTHR21091 1 19 1.0E-81 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 PANTHER PTHR21091 184 445 1.0E-81 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 5.9E-95 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 SUPERFAMILY SSF51735 1 112 2.62E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 PIRSF PIRSF036426 1 462 2.6E-206 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 1.2E-52 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Pfam PF13241 Putative NAD(P)-binding 6 115 2.3E-29 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 53.45 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 PANTHER PTHR21091:SF16 1 19 1.0E-81 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 PANTHER PTHR21091:SF16 184 445 1.0E-81 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Pfam PF10414 Sirohaem synthase dimerisation region 151 207 4.7E-23 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Gene3D G3DSA:3.40.1010.10 215 331 3.8E-47 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 SUPERFAMILY SSF75615 114 209 3.79E-27 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Gene3D G3DSA:1.10.8.210 150 210 6.8E-24 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Gene3D G3DSA:3.30.160.110 113 148 1.3E-17 T 23-04-2016 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Gene3D G3DSA:3.30.950.10 332 460 2.9E-54 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 Gene3D G3DSA:3.40.50.720 1 111 5.2E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS10635 b412f70784570f50ec2455913fd0f2af 462 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 9.5E-77 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 SUPERFAMILY SSF56655 10 273 1.19E-75 T 23-04-2016 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 1.7E-10 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 44 64 1.7E-10 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 1.7E-10 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 12 261 7.5E-92 T 23-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 PANTHER PTHR20854:SF5 3 258 1.9E-85 T 23-04-2016 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 222 236 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 Gene3D G3DSA:3.30.540.10 9 157 2.6E-41 T 23-04-2016 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 Gene3D G3DSA:3.40.190.80 163 264 4.2E-40 T 23-04-2016 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 Pfam PF00459 Inositol monophosphatase family 17 257 1.2E-49 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS06730 fa1a4d60dc1768fd47ecf6ecfe701fbe 274 PANTHER PTHR20854 3 258 1.9E-85 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09880 7cdb5a3cacaf138cdc93bd9bf08ab1f0 303 SUPERFAMILY SSF51556 4 283 8.62E-50 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS09880 7cdb5a3cacaf138cdc93bd9bf08ab1f0 303 PANTHER PTHR21240 28 292 6.8E-25 T 23-04-2016 MSIP34_RS09880 7cdb5a3cacaf138cdc93bd9bf08ab1f0 303 Gene3D G3DSA:3.20.20.140 43 283 1.3E-48 T 23-04-2016 MSIP34_RS09880 7cdb5a3cacaf138cdc93bd9bf08ab1f0 303 Pfam PF04909 Amidohydrolase 51 281 9.4E-26 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 Gene3D G3DSA:1.10.10.10 25 93 3.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 PANTHER PTHR11751 103 495 9.7E-40 T 23-04-2016 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 SUPERFAMILY SSF53383 86 490 3.2E-54 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 Pfam PF00155 Aminotransferase class I and II 149 466 2.5E-6 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 Gene3D G3DSA:3.40.640.10 168 382 3.2E-35 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 SUPERFAMILY SSF46785 23 94 8.02E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 PANTHER PTHR11751:SF10 103 495 9.7E-40 T 23-04-2016 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 Gene3D G3DSA:3.90.1150.10 385 485 8.8E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 SMART SM00345 32 91 2.4E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS12800 a487e3fee235de0412833387cbdd3e48 495 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 91 1.7E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 PANTHER PTHR11067 1 199 5.8E-73 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 Pfam PF01725 Ham1 family 8 193 1.2E-51 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 8 196 9.9E-56 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 6 198 49.562 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 Gene3D G3DSA:3.90.950.10 6 198 1.2E-74 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 SUPERFAMILY SSF52972 5 197 1.2E-70 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like MSIP34_RS00230 d1e0d29c67469c36dbed00dae8a10857 201 PANTHER PTHR11067:SF9 1 199 5.8E-73 T 23-04-2016 MSIP34_RS08540 68d41d3f3a24589576c5ca9eb354727b 182 PANTHER PTHR14359 7 149 4.9E-16 T 23-04-2016 MSIP34_RS08540 68d41d3f3a24589576c5ca9eb354727b 182 Gene3D G3DSA:3.40.50.1950 6 166 1.1E-25 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 MSIP34_RS08540 68d41d3f3a24589576c5ca9eb354727b 182 Pfam PF02441 Flavoprotein 8 122 1.1E-19 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 MSIP34_RS08540 68d41d3f3a24589576c5ca9eb354727b 182 SUPERFAMILY SSF52507 6 140 3.79E-21 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 MSIP34_RS08540 68d41d3f3a24589576c5ca9eb354727b 182 PANTHER PTHR14359:SF19 7 149 4.9E-16 T 23-04-2016 MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 297 7.7E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 PANTHER PTHR30158 3 399 1.7E-112 T 23-04-2016 MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 Gene3D G3DSA:2.40.50.100 76 109 9.1E-22 T 23-04-2016 MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 Gene3D G3DSA:2.40.50.100 184 217 9.1E-22 T 23-04-2016 MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 PANTHER PTHR30158:SF3 3 399 1.7E-112 T 23-04-2016 MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 SUPERFAMILY SSF111369 64 304 6.41E-64 T 23-04-2016 MSIP34_RS08600 2940e7077149f2748ec0d8f7efacfec3 404 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 51 378 7.2E-82 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 SUPERFAMILY SSF88659 81 162 5.98E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 PANTHER PTHR30173:SF30 22 160 2.9E-22 T 23-04-2016 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 162 5.1E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 Gene3D G3DSA:1.10.10.10 107 162 2.5E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 Pfam PF08281 Sigma-70, region 4 110 161 4.4E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 PANTHER PTHR30173 22 160 2.9E-22 T 23-04-2016 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 Gene3D G3DSA:1.10.1740.10 13 73 2.4E-5 T 23-04-2016 MSIP34_RS10915 a18892ccd080d5a32d2e9f506e0ba7d3 170 SUPERFAMILY SSF88946 10 69 3.3E-5 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 Gene3D G3DSA:3.20.20.70 12 272 9.6E-112 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 272 52.026 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 PANTHER PTHR21057 5 279 5.4E-158 T 23-04-2016 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 Pfam PF00793 DAHP synthetase I family 9 269 3.1E-66 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 271 1.7E-122 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 SUPERFAMILY SSF51569 2 271 5.95E-102 T 23-04-2016 MSIP34_RS04380 0b43bdc63c69490a0b24830ae3b8fef5 279 PANTHER PTHR21057:SF2 5 279 5.4E-158 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS09965 5842eecb93c1bd8eb0042b38606921e8 201 SUPERFAMILY SSF159594 25 192 1.78E-30 T 23-04-2016 MSIP34_RS09965 5842eecb93c1bd8eb0042b38606921e8 201 Gene3D G3DSA:3.40.50.10610 17 198 1.1E-21 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component MSIP34_RS09965 5842eecb93c1bd8eb0042b38606921e8 201 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 28 186 4.5E-40 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component MSIP34_RS08035 69ef125ce3f201383df39172f2217fb0 333 Pfam PF16220 Domain of unknown function (DUF4880) 19 60 5.9E-13 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS08035 69ef125ce3f201383df39172f2217fb0 333 PIRSF PIRSF018266 9 329 5.2E-90 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS08035 69ef125ce3f201383df39172f2217fb0 333 Pfam PF04773 FecR protein 121 214 3.0E-18 T 23-04-2016 IPR006860 FecR protein MSIP34_RS08035 69ef125ce3f201383df39172f2217fb0 333 PANTHER PTHR30273 11 330 7.1E-84 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS08035 69ef125ce3f201383df39172f2217fb0 333 PANTHER PTHR30273:SF3 11 330 7.1E-84 T 23-04-2016 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 PANTHER PTHR10277:SF28 2 556 7.9E-281 T 23-04-2016 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 Gene3D G3DSA:3.20.20.70 9 393 1.4E-151 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 SUPERFAMILY SSF89000 387 436 2.08E-15 T 23-04-2016 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 Pfam PF00682 HMGL-like 32 312 3.5E-78 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 39 55 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 Pfam PF08502 LeuA allosteric (dimerisation) domain 421 547 1.2E-21 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 549 54.254 T 23-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 SUPERFAMILY SSF110921 444 547 6.93E-28 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 SMART SM00917 421 548 1.2E-24 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 242 255 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 SUPERFAMILY SSF51569 21 329 7.14E-102 T 23-04-2016 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 PANTHER PTHR10277 2 556 7.9E-281 T 23-04-2016 MSIP34_RS09685 250351f3e786036fd3ac87e8162c6378 564 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 547 1.3E-240 T 23-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 Gene3D G3DSA:3.50.50.60 233 314 1.2E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 301 4.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 312 7.8E-117 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PANTHER PTHR22912:SF48 2 316 9.6E-152 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 1.3E-40 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.3E-40 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.3E-40 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.3E-40 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-40 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 6.7E-75 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 PANTHER PTHR22912 2 316 9.6E-152 T 23-04-2016 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 SUPERFAMILY SSF51905 1 312 1.38E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 Gene3D G3DSA:3.50.50.60 3 117 6.3E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06055 9b4abd64d7b38f16b60510eb093ebc85 316 Gene3D G3DSA:3.50.50.60 118 232 1.9E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS11215 495e702d1450432d7b7aaeb383275f44 266 PANTHER PTHR15362 19 160 4.1E-37 T 23-04-2016 MSIP34_RS11215 495e702d1450432d7b7aaeb383275f44 266 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 34 201 2.3E-35 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 MSIP34_RS11215 495e702d1450432d7b7aaeb383275f44 266 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 90 2.3E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MSIP34_RS11215 495e702d1450432d7b7aaeb383275f44 266 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 PIRSF PIRSF000441 1 237 2.0E-90 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 PANTHER PTHR23416:SF55 1 235 1.7E-96 T 23-04-2016 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 Gene3D G3DSA:2.160.10.10 59 222 9.4E-41 T 23-04-2016 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.9E-78 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 2.5E-6 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 150 1.0E-6 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 PANTHER PTHR23416 1 235 1.7E-96 T 23-04-2016 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 Gene3D G3DSA:1.10.3130.10 1 58 5.9E-26 T 23-04-2016 MSIP34_RS09335 f9adb26586c158d0f309976591c41212 251 SUPERFAMILY SSF51161 4 169 1.22E-57 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Gene3D G3DSA:3.40.50.10050 715 793 1.1E-25 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 SUPERFAMILY SSF52540 407 587 1.62E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 SUPERFAMILY SSF46955 3 51 1.76E-9 T 23-04-2016 IPR009061 Putative DNA-binding domain MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Pfam PF00009 Elongation factor Tu GTP binding domain 419 575 2.7E-33 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 912 17.825 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 SUPERFAMILY SSF52156 691 821 1.57E-38 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 417 573 6.5E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Pfam PF11987 Translation-initiation factor 2 699 804 4.2E-38 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 333 914 5.6E-266 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 ProSitePatterns PS01176 Initiation factor 2 signature. 865 887 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 60 98 9.1E-11 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 SUPERFAMILY SSF50447 816 912 1.7E-33 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Gene3D G3DSA:3.40.50.300 409 574 2.3E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 PANTHER PTHR23115 767 912 1.0E-206 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 PANTHER PTHR23115 399 742 1.0E-206 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 338 388 3.5E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Gene3D G3DSA:3.30.56.50 3 51 1.2E-16 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 PANTHER PTHR23115:SF184 767 912 1.0E-206 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 PANTHER PTHR23115:SF184 399 742 1.0E-206 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Gene3D G3DSA:2.40.30.10 587 679 6.8E-24 T 23-04-2016 MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 SUPERFAMILY SSF50447 587 669 2.17E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS00375 8a42534c741dbe63aa87f6ba88a3023c 914 Gene3D G3DSA:2.40.30.10 816 912 4.7E-38 T 23-04-2016 MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 Gene3D G3DSA:3.40.190.10 131 251 5.9E-23 T 23-04-2016 MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 SUPERFAMILY SSF53850 15 459 3.98E-91 T 23-04-2016 MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 PIRSF PIRSF002741 8 445 7.7E-71 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 Gene3D G3DSA:3.10.105.10 252 435 2.5E-41 T 23-04-2016 MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 59 383 5.9E-57 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 PANTHER PTHR30290 1 460 7.3E-84 T 23-04-2016 MSIP34_RS04915 a172867d40b12efbf1eaefea8e2c95d8 474 Gene3D G3DSA:3.90.76.10 48 130 8.5E-18 T 23-04-2016 MSIP34_RS04180 c11392efe034abb31237dd470ef33cce 132 SMART SM00448 6 120 3.0E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04180 c11392efe034abb31237dd470ef33cce 132 Gene3D G3DSA:3.40.50.2300 5 126 9.2E-38 T 23-04-2016 MSIP34_RS04180 c11392efe034abb31237dd470ef33cce 132 Pfam PF00072 Response regulator receiver domain 9 120 1.2E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04180 c11392efe034abb31237dd470ef33cce 132 SUPERFAMILY SSF52172 5 126 2.42E-34 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS04180 c11392efe034abb31237dd470ef33cce 132 PANTHER PTHR26402 6 126 3.0E-39 T 23-04-2016 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 412 1.0E-202 T 23-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 Gene3D G3DSA:3.40.718.10 13 412 1.0E-156 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 SMART SM01329 29 408 1.1E-174 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 30 408 1.8E-113 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 PANTHER PTHR11835 189 412 3.5E-230 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 PANTHER PTHR11835 1 165 3.5E-230 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 SUPERFAMILY SSF53659 5 412 1.82E-140 T 23-04-2016 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 PANTHER PTHR11835:SF52 189 412 3.5E-230 T 23-04-2016 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 PANTHER PTHR11835:SF52 1 165 3.5E-230 T 23-04-2016 MSIP34_RS02995 a5aa7ab7bf5ecddd40f4465085c88675 412 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 299 318 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 PANTHER PTHR11564 1 435 1.6E-247 T 23-04-2016 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 SUPERFAMILY SSF47446 328 430 8.34E-33 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Gene3D G3DSA:3.40.50.300 95 296 8.9E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Gene3D G3DSA:1.20.120.140 2 89 3.6E-35 T 23-04-2016 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 SMART SM00382 99 246 3.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 SMART SM00962 100 295 9.6E-113 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-21 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Gene3D G3DSA:1.10.260.30 327 432 5.1E-35 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.7E-173 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 SUPERFAMILY SSF52540 42 356 4.17E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 SMART SM00963 1 86 8.5E-37 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Pfam PF02978 Signal peptide binding domain 328 427 3.8E-30 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.225 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 PANTHER PTHR11564:SF7 1 435 1.6E-247 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 MSIP34_RS11190 2f75f8a8e095ba3194c0e2c5ce44b5f3 450 Pfam PF00448 SRP54-type protein, GTPase domain 101 294 1.5E-73 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 PANTHER PTHR33490 1 293 1.4E-78 T 23-04-2016 MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 PANTHER PTHR33490:SF6 1 293 1.4E-78 T 23-04-2016 MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 82 3.8E-23 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 SMART SM00460 176 246 4.1E-23 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 Gene3D G3DSA:3.90.260.10 180 249 2.8E-14 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 SUPERFAMILY SSF54001 95 271 1.18E-46 T 23-04-2016 MSIP34_RS01765 3d08a9e8237d38ec4ab1c49c087279e8 293 Pfam PF01841 Transglutaminase-like superfamily 140 244 6.4E-24 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 SUPERFAMILY SSF53720 14 499 3.93E-164 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 PANTHER PTHR11699:SF97 1 506 0.0 T 23-04-2016 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 Gene3D G3DSA:3.40.605.10 18 272 2.2E-95 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 7.8E-168 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 Gene3D G3DSA:3.40.309.10 273 469 1.3E-59 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 MSIP34_RS05990 a57b48b954a68c5bc39b39852133a317 506 PANTHER PTHR11699 1 506 0.0 T 23-04-2016 MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 Pfam PF01343 Peptidase family S49 132 279 6.7E-38 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 PANTHER PTHR30341:SF1 17 302 1.4E-92 T 23-04-2016 MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 PANTHER PTHR30341 17 302 1.4E-92 T 23-04-2016 MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 SUPERFAMILY SSF52096 206 266 3.42E-44 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 SUPERFAMILY SSF52096 46 177 3.42E-44 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 Gene3D G3DSA:3.90.226.10 43 169 6.8E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS06465 8a745aa4537b7b1b2678cd13a9fafa37 316 Gene3D G3DSA:3.90.226.10 207 291 6.8E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 176 316 9.1E-50 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PANTHER PTHR11728 1 327 4.9E-118 T 23-04-2016 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PIRSF PIRSF000114 1 328 5.4E-99 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 318 35.692 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 Gene3D G3DSA:1.10.1040.10 180 322 3.1E-55 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 SUPERFAMILY SSF51735 1 176 1.71E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 54 81 2.9E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 129 149 2.9E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 169 193 2.9E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 2.9E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 194 218 2.9E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 234 251 2.9E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 184 205 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 PANTHER PTHR11728:SF1 1 327 4.9E-118 T 23-04-2016 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 156 3.4E-40 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 Gene3D G3DSA:3.40.50.720 1 179 8.9E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02830 d31b776aa1113515056d3800c5f61c5f 329 SUPERFAMILY SSF48179 175 327 8.5E-53 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS02675 de070930b73d4a73af94fafaa14e94fb 311 PIRSF PIRSF016660 1 311 4.5E-123 T 23-04-2016 IPR008526 Inner membrane protein YedI MSIP34_RS02675 de070930b73d4a73af94fafaa14e94fb 311 Pfam PF05661 Protein of unknown function (DUF808) 4 300 5.4E-117 T 23-04-2016 IPR008526 Inner membrane protein YedI MSIP34_RS02675 de070930b73d4a73af94fafaa14e94fb 311 PANTHER PTHR30503 2 310 1.9E-99 T 23-04-2016 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.8E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.8E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.1E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 SUPERFAMILY SSF46689 3 68 2.31E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 PANTHER PTHR30055 2 196 4.1E-23 T 23-04-2016 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 Gene3D G3DSA:1.10.357.10 3 186 2.1E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS13635 0a173793206d57c7db168549ab706496 202 SUPERFAMILY SSF48498 80 180 7.05E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 Gene3D G3DSA:3.40.30.10 1 89 4.0E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 121 188 7.5E-11 T 23-04-2016 MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 75 9.4E-19 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 Gene3D G3DSA:1.20.1050.10 90 200 1.3E-23 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 SUPERFAMILY SSF52833 1 100 6.73E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 SUPERFAMILY SSF47616 70 201 4.18E-28 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 PANTHER PTHR11260:SF256 1 201 5.8E-42 T 23-04-2016 MSIP34_RS03110 117621c76feb90293fa2318eded1c35e 203 PANTHER PTHR11260 1 201 5.8E-42 T 23-04-2016 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 8.9E-7 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Pfam PF10410 DnaB-helicase binding domain of primase 367 422 3.6E-11 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Gene3D G3DSA:3.90.980.10 114 238 1.8E-42 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Gene3D G3DSA:1.20.50.20 366 423 5.5E-14 T 23-04-2016 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 SMART SM00400 33 87 2.3E-35 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Hamap MF_00974 DNA primase [dnaG]. 1 578 29.223 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 SMART SM00493 257 328 1.8E-16 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 249 1.4E-41 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 PANTHER PTHR30313 1 577 6.0E-150 T 23-04-2016 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 SUPERFAMILY SSF57783 1 97 2.04E-38 T 23-04-2016 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Gene3D G3DSA:3.40.1360.10 239 364 6.3E-46 T 23-04-2016 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Gene3D G3DSA:3.90.580.10 1 98 4.1E-42 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Pfam PF13662 Toprim domain 258 321 1.1E-15 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 TIGRFAM TIGR01391 dnaG: DNA primase 1 415 1.5E-146 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 PIRSF PIRSF002811 1 583 4.9E-149 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 SUPERFAMILY SSF56731 114 422 1.22E-105 T 23-04-2016 MSIP34_RS11975 e6feab5e187302383d3b04fcd25a20ca 584 Pfam PF01807 CHC2 zinc finger 3 97 4.0E-40 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 PANTHER PTHR32303:SF6 272 394 4.2E-181 T 23-04-2016 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 PANTHER PTHR32303:SF6 427 592 4.2E-181 T 23-04-2016 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 PANTHER PTHR32303:SF6 1 221 4.2E-181 T 23-04-2016 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SMART SM00564 301 349 200.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SMART SM00564 83 117 34.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SMART SM00564 182 219 230.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SMART SM00564 136 168 0.19 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SMART SM00564 523 554 0.048 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 297 318 - T 23-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SUPERFAMILY SSF50998 33 239 6.15E-154 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 SUPERFAMILY SSF50998 274 616 6.15E-154 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 Gene3D G3DSA:2.140.10.10 28 244 6.4E-148 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 Gene3D G3DSA:2.140.10.10 279 601 6.4E-148 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 Pfam PF01011 PQQ enzyme repeat 529 560 1.5E-4 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 Pfam PF13360 PQQ-like domain 80 224 9.6E-10 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 PANTHER PTHR32303 272 394 4.2E-181 T 23-04-2016 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 PANTHER PTHR32303 427 592 4.2E-181 T 23-04-2016 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 PANTHER PTHR32303 1 221 4.2E-181 T 23-04-2016 MSIP34_RS11810 4e776911cefa73115ea82544c68a96a4 625 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 26 582 6.5E-192 T 23-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Pfam PF03102 NeuB family 151 384 4.2E-79 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 PANTHER PTHR23416 91 410 2.3E-97 T 23-04-2016 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 SUPERFAMILY SSF51569 119 408 5.62E-79 T 23-04-2016 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 SMART SM00858 401 459 3.8E-5 T 23-04-2016 IPR013974 SAF domain MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Gene3D G3DSA:3.20.20.70 119 384 2.5E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Pfam PF00571 CBS domain 10 55 0.0043 T 23-04-2016 IPR000644 CBS domain MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 SUPERFAMILY SSF51658 454 747 1.71E-24 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 SUPERFAMILY SSF51269 393 458 4.08E-13 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Pfam PF01261 Xylose isomerase-like TIM barrel 492 702 1.1E-23 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 PANTHER PTHR23416:SF1 91 410 2.3E-97 T 23-04-2016 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 SUPERFAMILY SSF54631 8 110 2.65E-12 T 23-04-2016 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Gene3D G3DSA:3.90.1210.10 402 459 2.0E-12 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Gene3D G3DSA:3.20.20.150 520 713 6.7E-11 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Gene3D G3DSA:3.10.580.10 5 110 2.8E-12 T 23-04-2016 MSIP34_RS00710 051c7be51ac6ba4df58bf84abfe819c1 756 Pfam PF08666 SAF domain 403 458 6.9E-7 T 23-04-2016 IPR013974 SAF domain MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 Gene3D G3DSA:3.20.20.80 224 610 1.3E-68 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 PANTHER PTHR10357:SF137 224 710 3.8E-226 T 23-04-2016 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 PANTHER PTHR10357:SF137 34 158 3.8E-226 T 23-04-2016 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 SMART SM00642 261 606 1.3E-4 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 Pfam PF00128 Alpha amylase, catalytic domain 275 381 3.4E-6 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 PANTHER PTHR10357 224 710 3.8E-226 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 PANTHER PTHR10357 34 158 3.8E-226 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 31 714 44.345 T 23-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 Pfam PF11896 Domain of unknown function (DUF3416) 34 251 7.3E-44 T 23-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 MSIP34_RS12875 e9f33576dcefa27e3788ce6020183912 717 SUPERFAMILY SSF51445 212 613 3.11E-83 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 PANTHER PTHR18866 1 441 9.2E-299 T 23-04-2016 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 SMART SM00878 336 441 6.1E-63 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 SUPERFAMILY SSF51246 331 443 2.41E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 Gene3D G3DSA:3.40.50.20 1 129 7.2E-54 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.3E-230 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 9.2E-38 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 SUPERFAMILY SSF56059 83 346 9.37E-72 T 23-04-2016 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 Gene3D G3DSA:3.30.470.20 204 444 2.3E-99 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 Gene3D G3DSA:3.30.1490.20 130 203 5.3E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.8E-46 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 SUPERFAMILY SSF52440 1 113 4.24E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.5E-83 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS00115 03d1aba2a4a70afd0d4a62301e31d901 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 195 1.6E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 Gene3D G3DSA:1.10.150.240 25 90 2.1E-21 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 SUPERFAMILY SSF56784 7 221 2.98E-57 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 110 189 1.8E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.8E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.8E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 8 19 1.8E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 Gene3D G3DSA:3.40.50.1000 7 24 4.5E-44 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 Gene3D G3DSA:3.40.50.1000 91 223 4.5E-44 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 11 223 3.9E-70 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 195 2.3E-30 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 PANTHER PTHR18901:SF14 5 219 1.5E-55 T 23-04-2016 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 8 225 34.653 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 MSIP34_RS12650 27fab2c6fa803e17cb182e2cfbc96bc9 230 PANTHER PTHR18901 5 219 1.5E-55 T 23-04-2016 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 Gene3D G3DSA:3.40.50.300 199 360 4.1E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 7.3E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 7.3E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 Pfam PF13167 GTP-binding GTPase N-terminal 24 112 3.1E-30 T 23-04-2016 IPR025121 GTPase HflX, N-terminal MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 359 2.8E-146 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 PIRSF PIRSF006809 5 374 3.2E-135 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 2.2E-27 T 23-04-2016 IPR032305 GTP-binding protein, middle domain MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 PANTHER PTHR10229:SF0 1 359 9.1E-153 T 23-04-2016 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 PANTHER PTHR10229 1 359 9.1E-153 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 Pfam PF01926 50S ribosome-binding GTPase 201 318 9.9E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 Hamap MF_00900 GTPase HflX [hflX]. 27 373 44.627 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS08570 b8672ee748ccb9bd332e8e067e88d94b 379 SUPERFAMILY SSF52540 199 360 1.5E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 Gene3D G3DSA:1.10.10.10 6 88 7.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 PANTHER PTHR30126:SF23 6 290 5.4E-104 T 23-04-2016 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 Pfam PF03466 LysR substrate binding domain 96 290 5.1E-22 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.9E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.9E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.9E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 Gene3D G3DSA:3.40.190.10 189 262 5.5E-11 T 23-04-2016 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 SUPERFAMILY SSF46785 3 87 5.45E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 Gene3D G3DSA:3.40.190.10 96 188 7.8E-6 T 23-04-2016 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.9E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 SUPERFAMILY SSF53850 96 290 3.44E-24 T 23-04-2016 MSIP34_RS10520 af65bb26f60f8da4e79e894ac0f1ffa2 300 PANTHER PTHR30126 6 290 5.4E-104 T 23-04-2016 MSIP34_RS09615 62ad6b3452036de816f851688d62d6c7 268 Gene3D G3DSA:3.90.550.10 17 264 1.1E-12 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09615 62ad6b3452036de816f851688d62d6c7 268 Pfam PF00535 Glycosyl transferase family 2 33 160 5.0E-6 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS09615 62ad6b3452036de816f851688d62d6c7 268 SUPERFAMILY SSF53448 17 233 1.18E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 Gene3D G3DSA:3.60.15.10 18 258 4.3E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 PANTHER PTHR11935:SF95 3 264 2.3E-55 T 23-04-2016 MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 SMART SM00849 49 232 2.7E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 PANTHER PTHR11935 3 264 2.3E-55 T 23-04-2016 MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 Pfam PF00753 Metallo-beta-lactamase superfamily 47 232 2.2E-25 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 TIGRFAM TIGR04559 SoxH_rel_PQQ_2: quinoprotein relay system zinc metallohydrolase 2 22 303 3.4E-126 T 23-04-2016 IPR030829 Quinoprotein relay system zinc metallohydrolase 2 MSIP34_RS11760 2ee7c8e38fb4701a7ad5786eeb61a492 303 SUPERFAMILY SSF56281 2 287 9.94E-60 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS13025 b03bc0958e699c8305f3d8f156d932ca 372 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS13025 b03bc0958e699c8305f3d8f156d932ca 372 Pfam PF16074 Type IV Pilus-assembly protein W 242 366 4.6E-14 T 23-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 352 56.163 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 SUPERFAMILY SSF53383 5 352 5.98E-81 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 Gene3D G3DSA:3.90.1150.10 253 353 7.7E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 PANTHER PTHR11751:SF398 3 351 8.4E-109 T 23-04-2016 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 Pfam PF00155 Aminotransferase class I and II 25 348 4.3E-58 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 Gene3D G3DSA:3.40.640.10 38 252 5.7E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 PANTHER PTHR11751 3 351 8.4E-109 T 23-04-2016 MSIP34_RS01390 6f04fd37b77b2cd52c0b83743e25fa13 355 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 7 351 7.8E-94 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 PANTHER PTHR32552:SF36 11 666 1.1E-214 T 23-04-2016 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 SUPERFAMILY SSF56935 6 666 2.86E-65 T 23-04-2016 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 Gene3D G3DSA:2.40.170.20 149 666 5.4E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 Pfam PF00593 TonB dependent receptor 415 665 2.1E-11 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 Gene3D G3DSA:2.170.130.10 34 142 3.3E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 PANTHER PTHR32552 11 666 1.1E-214 T 23-04-2016 MSIP34_RS12285 3efd2709d4b1838248b595c561bfcad1 666 Pfam PF07715 TonB-dependent Receptor Plug Domain 33 137 2.3E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 Gene3D G3DSA:3.40.50.1100 41 141 2.0E-39 T 23-04-2016 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 293 1.3E-120 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 PANTHER PTHR10314:SF100 2 293 1.1E-170 T 23-04-2016 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 4 293 7.3E-143 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 PANTHER PTHR10314 2 293 1.1E-170 T 23-04-2016 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 SUPERFAMILY SSF53686 3 290 1.2E-92 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 282 6.3E-68 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 Gene3D G3DSA:3.40.50.1100 2 40 1.9E-80 T 23-04-2016 MSIP34_RS04780 1499acc6012208615dd92b4661d4eb88 295 Gene3D G3DSA:3.40.50.1100 147 293 1.9E-80 T 23-04-2016 MSIP34_RS02275 24f8eca3a0c9421908fc6a6c1dc4e3c3 315 PANTHER PTHR34595 2 312 1.7E-112 T 23-04-2016 MSIP34_RS02275 24f8eca3a0c9421908fc6a6c1dc4e3c3 315 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 310 6.4E-103 T 23-04-2016 IPR007296 Domain of unknown function DUF403 MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 Pfam PF03831 PhnA domain 46 113 1.1E-33 T 23-04-2016 IPR013988 PhnA protein, C-terminal MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 PANTHER PTHR30305 2 113 7.6E-78 T 23-04-2016 MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 SUPERFAMILY SSF57783 3 36 2.04E-12 T 23-04-2016 MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 Gene3D G3DSA:2.20.25.10 1 39 6.8E-20 T 23-04-2016 MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 Pfam PF08274 PhnA Zinc-Ribbon 4 32 6.4E-14 T 23-04-2016 IPR013987 PhnA protein, N-terminal MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 Gene3D G3DSA:2.30.30.40 44 113 1.2E-37 T 23-04-2016 MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 113 2.9E-50 T 23-04-2016 IPR004624 PhnA protein MSIP34_RS09775 cb15b7e06a9fa218089855619065b844 113 SUPERFAMILY SSF82057 42 113 2.79E-29 T 23-04-2016 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 PANTHER PTHR30173 8 159 2.1E-28 T 23-04-2016 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 Pfam PF04542 Sigma-70 region 2 11 78 6.4E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 159 2.2E-15 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 Gene3D G3DSA:1.10.10.10 109 159 5.1E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 Pfam PF08281 Sigma-70, region 4 110 159 2.7E-7 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 Gene3D G3DSA:1.10.1740.10 8 102 3.1E-13 T 23-04-2016 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 SUPERFAMILY SSF88946 8 93 6.67E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04070 70fffab870ba56ac80dfd887e8855978 180 SUPERFAMILY SSF88659 90 161 4.3E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 PANTHER PTHR10993 5 179 2.4E-57 T 23-04-2016 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 SUPERFAMILY SSF55681 2 203 1.74E-59 T 23-04-2016 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 24 178 1.2E-47 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 68 83 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 Hamap MF_00013 Octanoyltransferase [lipB]. 2 203 33.841 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 67 156 4.7E-5 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 PIRSF PIRSF016262 1 212 1.9E-51 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 72 125 3.0E-16 T 23-04-2016 MSIP34_RS12785 0eebb3090313e23c1d92265db550fbcc 213 Gene3D G3DSA:3.90.1550.10 3 197 1.5E-60 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF81665 748 777 1.09E-8 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF81665 278 310 1.09E-8 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF81665 410 501 1.09E-8 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 280 801 2.3E-107 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Gene3D G3DSA:2.70.150.10 276 409 8.2E-25 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 734 3.4E-21 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 656 3.4E-21 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 635 3.4E-21 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 699 718 3.4E-21 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 359 373 3.4E-21 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 3.4E-21 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Pfam PF00122 E1-E2 ATPase 281 498 8.1E-55 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF56784 562 799 3.74E-47 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF56784 506 525 3.74E-47 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Gene3D G3DSA:3.40.1110.10 524 596 2.1E-6 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PANTHER PTHR24093 93 802 1.6E-174 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 248 801 9.7E-156 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 ProSitePatterns PS01229 Hypothetical cof family signature 2. 699 721 - T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00943 Copper-transporting ATPase signature 299 317 6.4E-10 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00943 Copper-transporting ATPase signature 233 252 6.4E-10 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00943 Copper-transporting ATPase signature 433 447 6.4E-10 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00943 Copper-transporting ATPase signature 676 693 6.4E-10 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PRINTS PR00943 Copper-transporting ATPase signature 138 158 6.4E-10 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 282 783 1.9E-69 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Gene3D G3DSA:3.40.50.1000 619 767 3.3E-42 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Gene3D G3DSA:3.40.50.1000 484 523 3.3E-42 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 230 802 1.6E-148 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 6 89 2.6E-27 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Gene3D G3DSA:3.30.70.100 93 175 4.0E-19 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF55008 90 164 1.7E-19 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Pfam PF00403 Heavy-metal-associated domain 98 157 8.3E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 SUPERFAMILY SSF81653 312 408 1.02E-23 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 Pfam PF00702 haloacid dehalogenase-like hydrolase 506 712 1.4E-33 T 23-04-2016 MSIP34_RS10745 ad5bc658090779ea85e1a855fd46ce9a 802 PANTHER PTHR24093:SF50 93 802 1.6E-174 T 23-04-2016 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PANTHER PTHR22778 1 159 3.1E-40 T 23-04-2016 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PANTHER PTHR22778:SF16 1 159 3.1E-40 T 23-04-2016 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PIRSF PIRSF000194 1 162 5.8E-58 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 Pfam PF00186 Dihydrofolate reductase 3 159 7.7E-57 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 Gene3D G3DSA:3.40.430.10 1 159 2.7E-56 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 SUPERFAMILY SSF53597 3 159 2.49E-54 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PRINTS PR00070 Dihydrofolate reductase signature 93 107 1.4E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.4E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.4E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS04515 b3e0ae581eb8b0f961bf652e9182b3b9 163 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.4E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 3.9E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 PANTHER PTHR26402:SF151 66 199 1.6E-22 T 23-04-2016 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 Gene3D G3DSA:3.40.50.2300 65 144 8.5E-4 T 23-04-2016 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 Gene3D G3DSA:1.10.10.10 145 202 5.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 SUPERFAMILY SSF46894 138 201 1.7E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 9.1E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 9.1E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 9.1E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 PANTHER PTHR26402 66 199 1.6E-22 T 23-04-2016 MSIP34_RS05155 5dbb7c1a91437de3c429496ee015a672 205 SMART SM00421 143 200 9.6E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 Gene3D G3DSA:2.170.130.10 60 167 2.4E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 163 7.1E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 SUPERFAMILY SSF56935 38 731 2.75E-78 T 23-04-2016 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 Gene3D G3DSA:2.40.170.20 168 731 6.4E-53 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 Pfam PF00593 TonB dependent receptor 466 730 1.5E-20 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 PANTHER PTHR32552 528 733 1.6E-33 T 23-04-2016 MSIP34_RS08645 369c0273774c9da9ffba4d196ec2373a 733 PANTHER PTHR32552 36 505 1.6E-33 T 23-04-2016 MSIP34_RS09955 ab0ce4855eb02d40085e9fc7ad5cf352 183 SUPERFAMILY SSF52218 3 167 4.19E-31 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS09955 ab0ce4855eb02d40085e9fc7ad5cf352 183 PANTHER PTHR30543:SF8 1 174 4.3E-40 T 23-04-2016 MSIP34_RS09955 ab0ce4855eb02d40085e9fc7ad5cf352 183 Gene3D G3DSA:3.40.50.360 1 173 9.0E-35 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS09955 ab0ce4855eb02d40085e9fc7ad5cf352 183 Pfam PF03358 NADPH-dependent FMN reductase 3 144 5.4E-29 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 MSIP34_RS09955 ab0ce4855eb02d40085e9fc7ad5cf352 183 PANTHER PTHR30543 1 174 4.3E-40 T 23-04-2016 MSIP34_RS12590 ab549c84ac3207a64c0e96482ab6d03c 177 PIRSF PIRSF016481 12 177 7.2E-37 T 23-04-2016 IPR007446 Pilus assembly protein PilP MSIP34_RS12590 ab549c84ac3207a64c0e96482ab6d03c 177 Pfam PF04351 Pilus assembly protein, PilP 35 175 1.1E-45 T 23-04-2016 IPR007446 Pilus assembly protein PilP MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 Pfam PF06574 FAD synthetase 14 162 2.1E-50 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 Gene3D G3DSA:2.40.30.30 183 299 5.6E-36 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 Pfam PF01687 Riboflavin kinase 179 297 8.7E-37 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 PIRSF PIRSF004491 1 302 1.1E-102 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 SUPERFAMILY SSF52374 15 170 1.33E-34 T 23-04-2016 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 SMART SM00904 178 298 2.8E-60 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 PANTHER PTHR22749:SF0 1 297 6.3E-113 T 23-04-2016 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 Gene3D G3DSA:3.40.50.620 11 181 2.3E-61 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 PANTHER PTHR22749 1 297 6.3E-113 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 SUPERFAMILY SSF82114 169 298 9.81E-41 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 MSIP34_RS02650 df8e3a800aa023e077135cb137947462 302 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 297 1.9E-90 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 2.4E-34 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 PANTHER PTHR21011 1 125 4.4E-38 T 23-04-2016 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 SUPERFAMILY SSF54995 1 104 3.66E-38 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 Pfam PF01250 Ribosomal protein S6 3 90 1.5E-29 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 Gene3D G3DSA:3.30.70.60 1 104 6.8E-43 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.245 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS07290 cb6543d211a23af8329269ab3f68dd99 125 PANTHER PTHR21011:SF1 1 125 4.4E-38 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Gene3D G3DSA:3.30.2090.10 718 806 1.4E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82714 719 805 4.05E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1038 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82693 805 853 2.44E-23 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PANTHER PTHR32063:SF13 1 1034 0.0 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Gene3D G3DSA:3.30.70.1430 566 668 3.5E-32 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82693 38 130 2.62E-25 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82693 273 325 8.89E-24 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82693 134 181 8.89E-24 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Gene3D G3DSA:3.30.70.1430 38 138 6.4E-32 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82866 828 1022 1.44E-42 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Gene3D G3DSA:1.10.3850.10 811 1022 3.8E-55 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Gene3D G3DSA:1.10.3850.10 279 499 2.4E-58 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 9.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 PANTHER PTHR32063 1 1034 0.0 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82714 181 271 2.75E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 Gene3D G3DSA:3.30.2090.10 181 274 5.9E-25 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82866 295 498 1.83E-48 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82693 669 718 2.44E-23 T 23-04-2016 MSIP34_RS05895 67c5133ac61ff13c83767ecb5ccc9d64 1040 SUPERFAMILY SSF82693 564 668 4.45E-30 T 23-04-2016 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 Pfam PF00535 Glycosyl transferase family 2 151 338 2.6E-32 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 Pfam PF07238 PilZ domain 585 685 1.2E-7 T 23-04-2016 IPR009875 PilZ domain GO:0035438 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 28 725 3.3E-241 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 SUPERFAMILY SSF141371 586 668 1.18E-5 T 23-04-2016 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PANTHER PTHR10587:SF94 49 610 9.7E-66 T 23-04-2016 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 SUPERFAMILY SSF53448 147 451 4.22E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PANTHER PTHR10587 49 610 9.7E-66 T 23-04-2016 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 Gene3D G3DSA:3.90.550.10 148 399 1.9E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 416 442 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 102 127 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 557 578 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 74 94 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 445 464 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 485 504 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS00195 03b048c7f950ddd05ca2d41a874fd457 744 PRINTS PR01439 Cellulose synthase subunit A signature 157 176 3.8E-23 T 23-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 Gene3D G3DSA:1.20.950.20 19 275 6.3E-16 T 23-04-2016 MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 Gene3D G3DSA:1.10.1060.10 290 409 9.2E-24 T 23-04-2016 MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 PANTHER PTHR11921 114 697 1.3E-144 T 23-04-2016 MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 Pfam PF13183 4Fe-4S dicluster domain 310 391 3.3E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 Pfam PF02754 Cysteine-rich domain 581 664 9.4E-9 T 23-04-2016 IPR004017 Cysteine-rich domain MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 Pfam PF02754 Cysteine-rich domain 466 542 0.013 T 23-04-2016 IPR004017 Cysteine-rich domain MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 PANTHER PTHR11921:SF22 114 697 1.3E-144 T 23-04-2016 MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 SUPERFAMILY SSF103501 17 283 9.42E-27 T 23-04-2016 IPR023234 NarG-like domain MSIP34_RS12360 23bd263a349a37ceb19710dc3a3863e8 707 SUPERFAMILY SSF46548 291 407 3.14E-20 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 440 3.1E-178 T 23-04-2016 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 Gene3D G3DSA:3.80.30.20 150 381 1.4E-74 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 Pfam PF01938 TRAM domain 381 441 9.5E-19 T 23-04-2016 IPR002792 TRAM domain MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 439 3.7E-149 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 PANTHER PTHR11918 5 443 9.6E-194 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 SUPERFAMILY SSF102114 131 375 4.58E-58 T 23-04-2016 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 5 443 72.577 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 SMART SM00729 149 369 2.4E-51 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 Pfam PF00919 Uncharacterized protein family UPF0004 6 106 2.4E-30 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 Pfam PF04055 Radical SAM superfamily 154 326 1.7E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 MSIP34_RS10660 24045b2aa0fe7707d09959f719032fac 443 PANTHER PTHR11918:SF43 5 443 9.6E-194 T 23-04-2016 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 385 57.021 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 SUPERFAMILY SSF55973 3 109 6.28E-46 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Gene3D G3DSA:3.30.300.10 246 384 2.4E-68 T 23-04-2016 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 373 2.6E-67 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 PIRSF PIRSF000497 1 385 3.5E-171 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Gene3D G3DSA:3.30.300.10 135 235 1.8E-44 T 23-04-2016 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Gene3D G3DSA:3.30.300.10 11 134 2.6E-46 T 23-04-2016 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 384 1.6E-183 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 118 128 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 116 233 2.8E-46 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 SUPERFAMILY SSF55973 112 234 4.12E-52 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 7.0E-41 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 PANTHER PTHR11964 1 380 3.8E-273 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS00935 4809c21745735b76a561e6f624ae718e 385 SUPERFAMILY SSF55973 235 382 2.47E-68 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Gene3D G3DSA:3.30.70.240 400 480 1.3E-32 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Pfam PF03144 Elongation factor Tu domain 2 219 288 2.6E-9 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 SMART SM00838 398 483 0.0034 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Gene3D G3DSA:2.40.50.250 482 576 1.4E-39 T 23-04-2016 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Pfam PF00679 Elongation factor G C-terminus 396 479 1.0E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PANTHER PTHR23115:SF14 4 592 9.1E-279 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Gene3D G3DSA:3.30.70.870 304 399 4.0E-38 T 23-04-2016 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 SUPERFAMILY SSF52540 3 206 8.4E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Gene3D G3DSA:2.40.30.10 205 303 2.4E-26 T 23-04-2016 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PRINTS PR00315 GTP-binding elongation factor signature 123 132 8.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PRINTS PR00315 GTP-binding elongation factor signature 87 98 8.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PRINTS PR00315 GTP-binding elongation factor signature 71 81 8.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PRINTS PR00315 GTP-binding elongation factor signature 7 20 8.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PRINTS PR00315 GTP-binding elongation factor signature 51 59 8.7E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.7E-55 T 23-04-2016 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 SUPERFAMILY SSF50447 151 299 2.65E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 PANTHER PTHR23115 4 592 9.1E-279 T 23-04-2016 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 SUPERFAMILY SSF54980 398 510 2.59E-30 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 SUPERFAMILY SSF54980 302 387 2.45E-13 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 598 1.1E-292 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 Gene3D G3DSA:3.40.50.300 3 204 1.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08800 f862ee2fb18c8ba6e03b0f704ea5eeac 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 139 6.2E-22 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS04460 8d2d06cb7cace76b8d624a09115e61a0 413 Gene3D G3DSA:3.40.640.10 51 279 8.5E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS04460 8d2d06cb7cace76b8d624a09115e61a0 413 PANTHER PTHR11751 9 400 1.7E-172 T 23-04-2016 MSIP34_RS04460 8d2d06cb7cace76b8d624a09115e61a0 413 Pfam PF00155 Aminotransferase class I and II 35 395 3.9E-51 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS04460 8d2d06cb7cace76b8d624a09115e61a0 413 SUPERFAMILY SSF53383 5 400 6.78E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS04460 8d2d06cb7cace76b8d624a09115e61a0 413 Gene3D G3DSA:3.90.1150.10 280 404 5.4E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS04460 8d2d06cb7cace76b8d624a09115e61a0 413 PANTHER PTHR11751:SF303 9 400 1.7E-172 T 23-04-2016 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 Gene3D G3DSA:3.20.20.70 143 448 2.4E-164 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 PANTHER PTHR39329:SF1 1 442 1.5E-282 T 23-04-2016 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 Gene3D G3DSA:1.10.220.70 55 141 1.2E-41 T 23-04-2016 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 Gene3D G3DSA:2.30.170.30 1 54 1.9E-26 T 23-04-2016 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 PIRSF PIRSF018788 1 459 7.8E-241 T 23-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 PANTHER PTHR39329 1 442 1.5E-282 T 23-04-2016 MSIP34_RS04875 9b98c7efee1059c0551c80dc3c868800 465 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 3.3E-225 T 23-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 SUPERFAMILY SSF51011 560 619 2.96E-12 T 23-04-2016 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 SMART SM00642 40 439 1.8E-96 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 640 1186 4.0E-125 T 23-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 SUPERFAMILY SSF56112 840 895 2.72E-13 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 SUPERFAMILY SSF56112 937 1095 2.72E-13 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 32 512 2.2E-255 T 23-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 PANTHER PTHR10357:SF164 463 510 3.0E-274 T 23-04-2016 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 PANTHER PTHR10357:SF164 560 649 3.0E-274 T 23-04-2016 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 PANTHER PTHR10357:SF164 13 424 3.0E-274 T 23-04-2016 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Pfam PF16657 Maltogenic Amylase, C-terminal domain 557 616 9.7E-17 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Pfam PF01636 Phosphotransferase enzyme family 825 1054 8.8E-8 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Gene3D G3DSA:2.60.40.1180 559 619 2.4E-9 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Pfam PF00128 Alpha amylase, catalytic domain 55 408 4.0E-74 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 SUPERFAMILY SSF51445 44 487 1.33E-126 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Gene3D G3DSA:3.90.1200.10 938 1054 7.5E-7 T 23-04-2016 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 PANTHER PTHR10357 463 510 3.0E-274 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 PANTHER PTHR10357 560 649 3.0E-274 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 PANTHER PTHR10357 13 424 3.0E-274 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Gene3D G3DSA:3.90.400.10 132 200 5.8E-24 T 23-04-2016 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Gene3D G3DSA:3.20.20.80 34 131 1.1E-107 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Gene3D G3DSA:3.20.20.80 208 433 1.1E-107 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS14705 57cd9ace21a11a141ccc8e74ec2c8cfe 1199 Gene3D G3DSA:3.20.20.80 466 480 1.1E-107 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS07665 f4d0d86b4edd1ca12a1a94e4d8084eb1 336 Pfam PF00288 GHMP kinases N terminal domain 92 152 2.6E-6 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 MSIP34_RS07665 f4d0d86b4edd1ca12a1a94e4d8084eb1 336 TIGRFAM TIGR00144 beta_RFAP_syn: beta-ribofuranosylaminobenzene 5'-phosphate synthase family 20 329 3.4E-54 T 23-04-2016 IPR004422 GHMP kinase group 1 MetaCyc: PWY-6148|UniPathway: UPA00065 MSIP34_RS07665 f4d0d86b4edd1ca12a1a94e4d8084eb1 336 PIRSF PIRSF004884 16 331 9.9E-92 T 23-04-2016 IPR004422 GHMP kinase group 1 MetaCyc: PWY-6148|UniPathway: UPA00065 MSIP34_RS07665 f4d0d86b4edd1ca12a1a94e4d8084eb1 336 SUPERFAMILY SSF54211 20 161 6.07E-17 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07665 f4d0d86b4edd1ca12a1a94e4d8084eb1 336 Gene3D G3DSA:3.30.230.10 74 156 4.1E-10 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS07665 f4d0d86b4edd1ca12a1a94e4d8084eb1 336 Pfam PF08544 GHMP kinases C terminal 223 308 3.1E-11 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Gene3D G3DSA:3.30.365.10 555 724 1.6E-47 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 PANTHER PTHR11908:SF2 136 720 3.2E-193 T 23-04-2016 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Gene3D G3DSA:3.90.1170.50 190 297 6.9E-21 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 SUPERFAMILY SSF56003 54 255 9.77E-49 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Gene3D G3DSA:3.30.365.10 395 554 9.4E-37 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 PANTHER PTHR11908 136 720 3.2E-193 T 23-04-2016 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Gene3D G3DSA:3.30.365.10 57 188 2.6E-37 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 SMART SM01008 221 299 1.9E-17 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 SUPERFAMILY SSF56003 323 724 1.31E-120 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 41 189 6.9E-17 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 588 679 6.0E-19 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 322 556 1.7E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 MSIP34_RS06975 720c49c4fee1caed520172ce551c6f0e 731 PIRSF PIRSF036389 7 731 5.0E-267 T 23-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 PANTHER PTHR33867:SF1 1 144 9.2E-35 T 23-04-2016 MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 2 144 22.478 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 SUPERFAMILY SSF75420 2 76 4.84E-17 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 Pfam PF02576 Putative ribosome maturation factor RimP 8 140 7.6E-37 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 Gene3D G3DSA:3.30.300.70 2 73 5.4E-19 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 Gene3D G3DSA:2.30.30.180 80 142 8.9E-16 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 SUPERFAMILY SSF74942 77 144 9.02E-17 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal MSIP34_RS00365 232e0b1ca5f74d3f80a29c37f8939061 145 PANTHER PTHR33867 1 144 9.2E-35 T 23-04-2016 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 PANTHER PTHR30173 8 181 4.4E-27 T 23-04-2016 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 Pfam PF08281 Sigma-70, region 4 125 173 2.5E-8 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 SUPERFAMILY SSF88946 8 88 9.02E-18 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 Gene3D G3DSA:1.10.10.10 117 181 1.9E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 180 5.5E-21 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 TIGRFAM TIGR02943 Sig70_famx1: RNA polymerase sigma-70 factor, TIGR02943 family 9 186 8.3E-62 T 23-04-2016 IPR014289 RNA polymerase sigma-24-related MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 31 61 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 SUPERFAMILY SSF88659 113 181 1.85E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 Gene3D G3DSA:1.10.1740.10 9 96 2.5E-19 T 23-04-2016 MSIP34_RS09075 afe18f369b1db00446ed71b6f6c368cd 187 Pfam PF04542 Sigma-70 region 2 10 75 3.1E-15 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS03840 28d3b85eb0ba1cf35acfa12732c8e097 147 TIGRFAM TIGR00208 fliS: flagellar protein FliS 19 126 7.7E-30 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 MSIP34_RS03840 28d3b85eb0ba1cf35acfa12732c8e097 147 Pfam PF02561 Flagellar protein FliS 10 126 3.0E-37 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 MSIP34_RS03840 28d3b85eb0ba1cf35acfa12732c8e097 147 SUPERFAMILY SSF101116 10 130 2.35E-38 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 MSIP34_RS03840 28d3b85eb0ba1cf35acfa12732c8e097 147 PIRSF PIRSF039090 3 136 3.9E-40 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 MSIP34_RS03840 28d3b85eb0ba1cf35acfa12732c8e097 147 PANTHER PTHR34773 1 147 6.6E-39 T 23-04-2016 MSIP34_RS03840 28d3b85eb0ba1cf35acfa12732c8e097 147 Gene3D G3DSA:1.20.120.340 9 132 1.0E-40 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 SUPERFAMILY SSF50486 208 309 1.75E-26 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 Gene3D G3DSA:3.40.50.170 4 208 1.4E-72 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 PANTHER PTHR11138 2 314 5.6E-108 T 23-04-2016 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 Pfam PF02911 Formyl transferase, C-terminal domain 207 301 2.0E-23 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 Pfam PF00551 Formyl transferase 5 182 6.3E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 Gene3D G3DSA:3.10.25.10 210 309 1.3E-30 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 SUPERFAMILY SSF53328 4 209 2.09E-64 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 302 4.2E-91 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS00980 b3916a4b1fbcd6ccef03a0cb262112db 316 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 304 36.18 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS12735 5baf3f5336530a615fc41427492b9ca1 95 SUPERFAMILY SSF141000 3 93 4.32E-28 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MSIP34_RS12735 5baf3f5336530a615fc41427492b9ca1 95 PANTHER PTHR15004 1 95 6.0E-28 T 23-04-2016 MSIP34_RS12735 5baf3f5336530a615fc41427492b9ca1 95 PANTHER PTHR15004:SF0 1 95 6.0E-28 T 23-04-2016 MSIP34_RS12735 5baf3f5336530a615fc41427492b9ca1 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 2.3E-29 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MSIP34_RS12735 5baf3f5336530a615fc41427492b9ca1 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 6.4E-17 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MSIP34_RS12735 5baf3f5336530a615fc41427492b9ca1 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 22.494 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 8.3E-15 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 Gene3D G3DSA:1.10.166.10 1 71 4.5E-29 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 275 6.7E-146 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 134 168 5.9E-5 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 274 55.551 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 PANTHER PTHR19136:SF52 15 275 5.1E-127 T 23-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 SUPERFAMILY SSF51161 2 258 9.7E-76 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 PANTHER PTHR19136 15 275 5.1E-127 T 23-04-2016 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 71 3.2E-25 T 23-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 MSIP34_RS04750 6ff0c3eb37467dc5b6f91069bf3e9549 275 Gene3D G3DSA:2.160.10.10 91 257 9.7E-63 T 23-04-2016 MSIP34_RS07655 ccca18a1f73680bfd6c8809a501c9a75 388 SUPERFAMILY SSF56059 160 353 9.12E-15 T 23-04-2016 MSIP34_RS07655 ccca18a1f73680bfd6c8809a501c9a75 388 PIRSF PIRSF016817 1 379 1.1E-83 T 23-04-2016 IPR016677 Uncharacterised conserved protein UCP016817, ATP-dependent carboligase MSIP34_RS07655 ccca18a1f73680bfd6c8809a501c9a75 388 Pfam PF02655 ATP-grasp domain 116 262 2.2E-15 T 23-04-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 MSIP34_RS07655 ccca18a1f73680bfd6c8809a501c9a75 388 Gene3D G3DSA:3.30.470.20 160 288 1.8E-11 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 ProSitePatterns PS00801 Transketolase signature 1. 30 49 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 SUPERFAMILY SSF52518 1 342 2.17E-83 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 612 3.6E-273 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 SUPERFAMILY SSF52922 485 612 2.49E-33 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 276 1.2E-125 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Gene3D G3DSA:3.40.50.920 489 611 1.4E-34 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Pfam PF02779 Transketolase, pyrimidine binding domain 312 471 2.1E-40 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Pfam PF02780 Transketolase, C-terminal domain 488 604 7.1E-27 T 23-04-2016 IPR033248 Transketolase, C-terminal domain MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 ProSitePatterns PS00802 Transketolase signature 2. 418 434 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 PANTHER PTHR11624:SF20 235 612 0.0 T 23-04-2016 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 PANTHER PTHR11624:SF20 18 212 0.0 T 23-04-2016 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Gene3D G3DSA:3.40.50.970 327 488 4.5E-39 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 SMART SM00861 312 476 1.6E-72 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 PANTHER PTHR11624 235 612 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 PANTHER PTHR11624 18 212 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 4 613 47.216 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 SUPERFAMILY SSF52518 285 474 1.18E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Gene3D G3DSA:3.40.50.970 18 195 1.9E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03030 b564dfa235b810f4cfb9c22e079d8fe2 613 Gene3D G3DSA:3.40.50.970 236 326 1.9E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 1.7E-19 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 SUPERFAMILY SSF52540 350 507 1.11E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 SUPERFAMILY SSF52540 1 200 1.11E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 SUPERFAMILY SSF52540 287 322 1.11E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 Gene3D G3DSA:3.40.50.300 428 494 7.0E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 Gene3D G3DSA:3.40.50.300 272 378 7.5E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 Gene3D G3DSA:3.40.50.300 1 206 1.2E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 PIRSF PIRSF003128 1 551 2.9E-152 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 549 7.1E-147 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 MSIP34_RS09525 a64e0285ab228bfdf2a751d0263aca01 551 PANTHER PTHR11059 2 551 1.6E-150 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.2E-55 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 PANTHER PTHR13767:SF2 4 297 1.3E-116 T 23-04-2016 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 235 4.0E-15 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 5.7E-79 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 SUPERFAMILY SSF55120 10 226 4.56E-82 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 297 18.734 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 PANTHER PTHR13767 4 297 1.3E-116 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 SUPERFAMILY SSF88697 240 298 4.62E-12 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 Gene3D G3DSA:2.30.130.10 239 298 1.5E-18 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS00385 c0f1a4453c0f0c848ad5088ce04ebfc3 301 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 241 297 5.2E-17 T 23-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 Pfam PF00589 Phage integrase family 327 451 4.9E-9 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 PANTHER PTHR30629 130 169 6.3E-14 T 23-04-2016 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 PANTHER PTHR30629 4 108 6.3E-14 T 23-04-2016 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 PANTHER PTHR30629 196 488 6.3E-14 T 23-04-2016 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 Pfam PF13356 Domain of unknown function (DUF4102) 10 98 7.3E-10 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 Gene3D G3DSA:1.10.443.10 307 451 4.9E-15 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS10510 2f192bb4ecb3f97c6c50b6ebce243514 492 SUPERFAMILY SSF56349 201 455 4.12E-19 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 SUPERFAMILY SSF52172 2 126 5.41E-43 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 Pfam PF00072 Response regulator receiver domain 5 117 2.4E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 PANTHER PTHR26402:SF576 3 225 2.9E-115 T 23-04-2016 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.5E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 SUPERFAMILY SSF46894 123 226 8.22E-33 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 SMART SM00448 3 116 5.7E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 PANTHER PTHR26402 3 225 2.9E-115 T 23-04-2016 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 Gene3D G3DSA:1.10.10.10 127 227 1.4E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 3.7E-107 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 SMART SM00862 150 225 1.3E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS11360 ae3f19f1ffbc05cf71fc5807a9359802 228 Gene3D G3DSA:3.40.50.2300 3 125 6.4E-42 T 23-04-2016 MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 Gene3D G3DSA:3.40.50.720 2 232 4.4E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 108 124 8.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 153 8.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 60 71 8.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 172 8.1E-19 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PANTHER PTHR24322:SF631 134 166 5.5E-28 T 23-04-2016 MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PANTHER PTHR24322:SF631 2 118 5.5E-28 T 23-04-2016 MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 Pfam PF00106 short chain dehydrogenase 2 173 2.5E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 121 149 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PANTHER PTHR24322 134 166 5.5E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PANTHER PTHR24322 2 118 5.5E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 SUPERFAMILY SSF51735 2 232 1.24E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 114 122 6.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 60 71 6.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14085 0d1ce918ee142dec3aee3909cfbd995c 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 153 6.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 Gene3D G3DSA:2.30.30.30 3 92 5.9E-20 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 103 5.4E-36 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 1.8E-23 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 19.518 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 SUPERFAMILY SSF50104 3 102 1.55E-30 T 23-04-2016 IPR008991 Translation protein SH3-like domain MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 SMART SM00739 3 30 3.6E-4 T 23-04-2016 IPR005824 KOW MSIP34_RS01635 e85330fa8ff453b2215f352aa9fec1c3 105 PANTHER PTHR12903 3 104 1.9E-42 T 23-04-2016 MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 Pfam PF00270 DEAD/DEAH box helicase 222 368 1.7E-14 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 Gene3D G3DSA:3.40.50.300 201 388 1.9E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 TIGRFAM TIGR00595 priA: primosomal protein N' 225 734 7.3E-177 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 SUPERFAMILY SSF52540 199 380 5.51E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 SUPERFAMILY SSF52540 467 614 1.17E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 Pfam PF00271 Helicase conserved C-terminal domain 521 595 1.3E-6 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 PANTHER PTHR30580 1 736 2.7E-234 T 23-04-2016 MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 Hamap MF_00983 Probable primosomal protein N' [priA]. 13 736 23.529 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 Gene3D G3DSA:3.40.50.300 462 639 6.5E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 SMART SM00490 499 596 3.2E-8 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS14065 dcce4ab52d98d730112c3d3b6273cbda 736 SMART SM00487 200 396 8.3E-22 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 PANTHER PTHR10593 43 246 2.0E-98 T 23-04-2016 MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 201 212 - T 23-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 SMART SM00090 42 246 3.9E-9 T 23-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 SUPERFAMILY SSF56112 55 232 4.47E-20 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 PANTHER PTHR10593:SF19 43 246 2.0E-98 T 23-04-2016 MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 Gene3D G3DSA:3.30.200.20 54 162 2.5E-12 T 23-04-2016 MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 Gene3D G3DSA:1.10.510.10 176 246 2.0E-15 T 23-04-2016 MSIP34_RS14230 5e5d6787f91dac3cd431bff08aed32bb 246 Pfam PF01163 RIO1 family 68 246 2.9E-39 T 23-04-2016 MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 SUPERFAMILY SSF54523 8 136 1.62E-22 T 23-04-2016 MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 1.9E-12 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 2.6E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 PANTHER PTHR30093 1 42 2.3E-17 T 23-04-2016 MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 Pfam PF00114 Pilin (bacterial filament) 37 136 8.4E-15 T 23-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS03060 ce54267a7e209f88d8eec5b06675b604 139 Gene3D G3DSA:3.30.700.10 8 137 3.8E-36 T 23-04-2016 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 PANTHER PTHR11075 1 356 2.5E-177 T 23-04-2016 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.403 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 Gene3D G3DSA:1.20.58.410 8 92 1.2E-17 T 23-04-2016 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 SUPERFAMILY SSF75620 12 353 1.96E-135 T 23-04-2016 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 Pfam PF03462 PCRF domain 13 203 3.3E-75 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 Gene3D G3DSA:3.30.160.20 213 289 2.1E-35 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 5.8E-165 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 PANTHER PTHR11075:SF9 1 356 2.5E-177 T 23-04-2016 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 SMART SM00937 63 178 5.1E-65 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 MSIP34_RS12665 b454a0bcf0144b9934fc6384ee67f7f0 360 Pfam PF00472 RF-1 domain 214 321 2.0E-41 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 8 160 2.7E-66 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 SMART SM01001 6 157 1.3E-103 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 Pfam PF00731 AIR carboxylase 7 155 3.3E-65 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 8 161 32.541 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 Gene3D G3DSA:3.40.50.7700 3 160 7.1E-75 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 SUPERFAMILY SSF52255 7 161 9.29E-67 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 PIRSF PIRSF001338 3 165 4.0E-68 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 PANTHER PTHR23046 5 157 7.4E-84 T 23-04-2016 MSIP34_RS02630 df669d9554eb0f848bce44a6c82eedd2 166 PANTHER PTHR23046:SF2 5 157 7.4E-84 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 Gene3D G3DSA:3.30.70.270 323 491 2.1E-59 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 SUPERFAMILY SSF55073 327 484 6.04E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 SMART SM00267 312 483 3.3E-63 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 PANTHER PTHR10799:SF774 28 131 2.6E-93 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 PANTHER PTHR10799:SF774 355 593 2.6E-93 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 Gene3D G3DSA:3.30.450.20 180 308 1.1E-20 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 SUPERFAMILY SSF141868 498 747 1.11E-94 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 PANTHER PTHR10799 28 131 2.6E-93 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 PANTHER PTHR10799 355 593 2.6E-93 T 23-04-2016 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 Pfam PF00563 EAL domain 499 734 1.6E-76 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 316 3.8E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 Pfam PF00989 PAS fold 197 308 9.8E-16 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 SMART SM00052 493 739 3.9E-121 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 SUPERFAMILY SSF55785 179 309 4.54E-19 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 321 481 9.2E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 SMART SM00091 192 257 2.1E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 479 7.8E-52 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12255 6c606fabfdf02b49c97173519573226a 751 Gene3D G3DSA:3.20.20.450 496 747 2.4E-104 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SUPERFAMILY SSF55785 434 540 6.28E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SUPERFAMILY SSF141868 729 977 8.5E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Pfam PF13426 PAS domain 439 541 1.0E-13 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Gene3D G3DSA:3.30.70.270 555 722 1.2E-59 T 23-04-2016 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Gene3D G3DSA:3.30.450.40 245 429 1.4E-9 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SMART SM00052 724 970 1.9E-118 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Pfam PF01590 GAF domain 331 418 5.2E-5 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 PANTHER PTHR10799:SF774 441 824 2.0E-97 T 23-04-2016 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Gene3D G3DSA:3.30.450.20 108 241 4.1E-13 T 23-04-2016 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 PANTHER PTHR10799 441 824 2.0E-97 T 23-04-2016 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 433 549 3.4E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 250 4.7E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SMART SM00091 428 495 1.0E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SMART SM00091 124 192 0.0062 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Gene3D G3DSA:3.30.450.20 437 541 2.4E-22 T 23-04-2016 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SUPERFAMILY SSF55073 558 715 1.8E-51 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 551 711 4.1E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Gene3D G3DSA:3.20.20.450 728 977 3.3E-99 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Pfam PF00990 Diguanylate cyclase, GGDEF domain 554 710 7.9E-51 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SMART SM00267 542 714 1.6E-67 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Pfam PF08448 PAS fold 131 245 7.4E-17 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 Pfam PF00563 EAL domain 730 965 6.7E-75 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SUPERFAMILY SSF55785 109 241 9.25E-15 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02755 d5c5e3752159079a8de188b6d95d0da9 984 SUPERFAMILY SSF55781 264 420 2.4E-10 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 PANTHER PTHR10073 4 620 1.8E-152 T 23-04-2016 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 Gene3D G3DSA:3.30.565.10 4 213 4.8E-68 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 Pfam PF08676 MutL C terminal dimerisation domain 427 580 7.7E-44 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 6.8E-93 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 3.6E-39 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 620 27.853 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 124 2.3E-9 T 23-04-2016 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 SUPERFAMILY SSF118116 426 622 3.14E-56 T 23-04-2016 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 SMART SM01340 208 326 2.5E-59 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 SMART SM00853 431 580 2.2E-47 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 SUPERFAMILY SSF54211 191 326 2.88E-37 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 Gene3D G3DSA:3.30.230.10 214 325 5.4E-38 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS06565 bd1b027d513c289166e56a41bfbe8d94 624 SUPERFAMILY SSF55874 4 207 6.94E-50 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 SUPERFAMILY SSF55653 60 147 2.22E-24 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 SUPERFAMILY SSF55658 1 57 1.19E-18 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.1E-23 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 PANTHER PTHR21368 1 145 5.4E-48 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 5.9E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 Gene3D G3DSA:3.40.5.10 1 52 4.5E-26 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.0E-43 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 Gene3D G3DSA:3.10.430.100 63 148 6.0E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal MSIP34_RS07275 6640d65c7260a4dee95cd22040f48259 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.648 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 SUPERFAMILY SSF51735 4 181 1.37E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 PANTHER PTHR10836:SF50 4 352 3.8E-63 T 23-04-2016 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 PIRSF PIRSF000149 2 348 1.1E-65 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 5 162 2.9E-23 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 SUPERFAMILY SSF55347 162 322 1.22E-36 T 23-04-2016 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 156 174 3.2E-11 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 3.2E-11 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 183 199 3.2E-11 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 Gene3D G3DSA:3.30.360.10 172 329 2.4E-37 T 23-04-2016 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 Gene3D G3DSA:3.40.50.720 4 171 9.3E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 PANTHER PTHR10836 4 352 3.8E-63 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 320 2.8E-31 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03225 4c2f03ff9f5d6fcc285de54d0b82c18f 361 SMART SM00846 4 162 1.7E-15 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS11640 ee004e65e3354c78ec0fe71ef3a79b85 196 Pfam PF13580 SIS domain 16 146 2.3E-30 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 MSIP34_RS11640 ee004e65e3354c78ec0fe71ef3a79b85 196 Gene3D G3DSA:3.40.50.10490 2 189 4.5E-51 T 23-04-2016 MSIP34_RS11640 ee004e65e3354c78ec0fe71ef3a79b85 196 PANTHER PTHR30390 3 194 4.6E-83 T 23-04-2016 MSIP34_RS11640 ee004e65e3354c78ec0fe71ef3a79b85 196 PANTHER PTHR30390:SF5 3 194 4.6E-83 T 23-04-2016 MSIP34_RS11640 ee004e65e3354c78ec0fe71ef3a79b85 196 SUPERFAMILY SSF53697 3 190 3.15E-50 T 23-04-2016 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 PANTHER PTHR21403:SF3 1 215 2.1E-86 T 23-04-2016 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 187 4.0E-57 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 PANTHER PTHR21403 1 215 2.1E-86 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 Gene3D G3DSA:3.40.190.10 1 145 8.5E-43 T 23-04-2016 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 Pfam PF01634 ATP phosphoribosyltransferase 51 205 2.4E-49 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 SUPERFAMILY SSF53850 1 206 1.13E-64 T 23-04-2016 MSIP34_RS01380 eb3fe5b19a0ab63a6b2903250d544fef 216 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 211 56.251 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 407 2.7E-70 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 825 23.079 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Gene3D G3DSA:3.40.50.620 430 609 2.4E-159 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Gene3D G3DSA:3.40.50.620 4 222 2.4E-159 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 SUPERFAMILY SSF47323 624 825 4.67E-35 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Gene3D G3DSA:1.10.730.10 610 761 2.0E-43 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 SUPERFAMILY SSF50677 226 420 1.36E-50 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PANTHER PTHR11946 245 825 0.0 T 23-04-2016 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PANTHER PTHR11946 1 206 0.0 T 23-04-2016 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 2.5E-52 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PANTHER PTHR11946:SF7 245 825 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 PANTHER PTHR11946:SF7 1 206 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 577 3.7E-272 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 620 3.4E-25 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 SUPERFAMILY SSF52374 5 226 1.92E-152 T 23-04-2016 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 SUPERFAMILY SSF52374 421 630 1.92E-152 T 23-04-2016 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Pfam PF08264 Anticodon-binding domain of tRNA 666 787 4.3E-16 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Gene3D G3DSA:3.90.740.10 223 429 1.1E-53 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 MSIP34_RS02920 91ec2ab16612f6477d35dac915d525a5 826 Pfam PF09334 tRNA synthetases class I (M) 39 171 5.1E-19 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 Gene3D G3DSA:3.30.910.20 12 59 1.6E-29 T 23-04-2016 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 Gene3D G3DSA:3.30.910.20 97 163 1.6E-29 T 23-04-2016 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 SMART SM00935 10 163 1.8E-38 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 SUPERFAMILY SSF111384 22 163 6.41E-26 T 23-04-2016 IPR024930 Skp domain MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 PANTHER PTHR35089 5 162 5.5E-28 T 23-04-2016 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 PANTHER PTHR35089:SF1 5 162 5.5E-28 T 23-04-2016 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 Pfam PF03938 Outer membrane protein (OmpH-like) 9 162 4.7E-29 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 MSIP34_RS01105 a245c92ca8a6e95ef96f18ef86c947a7 163 PIRSF PIRSF002094 1 163 4.6E-40 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 Gene3D G3DSA:3.30.70.100 323 406 5.6E-19 T 23-04-2016 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 SUPERFAMILY SSF50182 251 316 6.54E-15 T 23-04-2016 IPR010920 LSM domain MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 SUPERFAMILY SSF82689 322 419 1.7E-25 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 SUPERFAMILY SSF82861 168 249 8.76E-12 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 PANTHER PTHR30347:SF3 70 429 5.4E-63 T 23-04-2016 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 PANTHER PTHR30347 70 429 5.4E-63 T 23-04-2016 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 Pfam PF00924 Mechanosensitive ion channel 208 408 3.5E-48 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 MSIP34_RS01725 cde998a8ee0f7ea9c11ebe61e6bb2056 430 Gene3D G3DSA:2.30.30.60 268 315 4.1E-13 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 Pfam PF08447 PAS fold 30 99 1.3E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 Gene3D G3DSA:3.30.450.40 126 290 7.0E-26 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 122 9.0E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 Gene3D G3DSA:3.30.450.20 6 125 1.0E-22 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 SMART SM00091 7 73 1.7E-11 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 Pfam PF13185 GAF domain 138 277 2.0E-12 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 Gene3D G3DSA:3.30.70.270 291 443 2.3E-56 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 SUPERFAMILY SSF55073 294 445 3.69E-49 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 SMART SM00267 278 449 9.5E-61 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 443 3.2E-44 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 PANTHER PTHR10799 322 440 2.8E-41 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 PANTHER PTHR10799 1 252 2.8E-41 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 PANTHER PTHR10799:SF774 322 440 2.8E-41 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 PANTHER PTHR10799:SF774 1 252 2.8E-41 T 23-04-2016 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 SUPERFAMILY SSF55781 140 289 9.81E-23 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 SMART SM00065 139 286 8.2E-15 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 SUPERFAMILY SSF55785 18 122 1.97E-24 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00660 77e47e8342077015cd0cecf2e1872b85 450 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 443 6.1E-50 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 Gene3D G3DSA:1.10.10.10 106 161 7.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 PANTHER PTHR30173 9 161 2.5E-37 T 23-04-2016 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 SUPERFAMILY SSF88659 86 161 1.81E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 Pfam PF04542 Sigma-70 region 2 12 78 3.9E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 Pfam PF08281 Sigma-70, region 4 109 161 4.7E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 PANTHER PTHR30173:SF9 9 161 2.5E-37 T 23-04-2016 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 162 1.0E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 SUPERFAMILY SSF88946 6 75 2.16E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04095 d71d97db586614b134d799d33a37b824 171 Gene3D G3DSA:1.10.1740.10 8 79 1.1E-11 T 23-04-2016 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 SMART SM00382 26 223 4.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 SMART SM00382 337 503 2.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 Pfam PF16326 ABC transporter C-terminal domain 561 623 6.7E-10 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 SUPERFAMILY SSF52540 297 510 5.25E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 PANTHER PTHR19211:SF49 1 555 0.0 T 23-04-2016 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 Gene3D G3DSA:3.40.50.300 1 265 2.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 Gene3D G3DSA:3.40.50.300 311 517 1.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 SUPERFAMILY SSF52540 119 257 6.61E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 SUPERFAMILY SSF52540 2 92 6.61E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 Pfam PF00005 ABC transporter 328 459 7.8E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 Pfam PF00005 ABC transporter 18 178 7.6E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 PANTHER PTHR19211 1 555 0.0 T 23-04-2016 MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 Pfam PF12848 ABC transporter 217 295 6.0E-28 T 23-04-2016 IPR032781 ABC-transporter extension domain MSIP34_RS06360 ed5626cc3ad5003f3b2e663d62a58dc4 633 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS02800 5bce15214c4d152548507f5b744ff098 421 SUPERFAMILY SSF51261 283 417 5.23E-41 T 23-04-2016 IPR011055 Duplicated hybrid motif MSIP34_RS02800 5bce15214c4d152548507f5b744ff098 421 Gene3D G3DSA:2.70.70.10 282 417 6.5E-34 T 23-04-2016 MSIP34_RS02800 5bce15214c4d152548507f5b744ff098 421 Pfam PF01551 Peptidase family M23 321 414 1.6E-24 T 23-04-2016 IPR016047 Peptidase M23 MSIP34_RS02800 5bce15214c4d152548507f5b744ff098 421 PANTHER PTHR21666 17 417 5.9E-70 T 23-04-2016 MSIP34_RS02800 5bce15214c4d152548507f5b744ff098 421 PANTHER PTHR21666:SF213 17 417 5.9E-70 T 23-04-2016 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 72 175 1.3E-45 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 SUPERFAMILY SSF103088 63 175 2.35E-33 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 PRINTS PR01021 OMPA domain signature 120 136 1.9E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 PRINTS PR01021 OMPA domain signature 105 120 1.9E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 PRINTS PR01021 OMPA domain signature 75 97 1.9E-16 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 Gene3D G3DSA:3.30.1330.60 63 175 5.0E-33 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 Pfam PF00691 OmpA family 74 169 2.1E-21 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 PANTHER PTHR30128 9 176 8.2E-50 T 23-04-2016 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 ProSitePatterns PS01068 OmpA-like domain. 107 151 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 MSIP34_RS12060 b19227c90e70d132eba5613b17e4cf25 178 PANTHER PTHR30128:SF18 9 176 8.2E-50 T 23-04-2016 MSIP34_RS11345 1a1c51e2619597bd3aabc1a7a8195820 158 SUPERFAMILY SSF48013 19 150 5.1E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MSIP34_RS11345 1a1c51e2619597bd3aabc1a7a8195820 158 PANTHER PTHR11078 1 150 2.2E-35 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 MSIP34_RS11345 1a1c51e2619597bd3aabc1a7a8195820 158 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 18 149 20.348 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 MSIP34_RS11345 1a1c51e2619597bd3aabc1a7a8195820 158 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 19 147 1.0E-37 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 MSIP34_RS11345 1a1c51e2619597bd3aabc1a7a8195820 158 Pfam PF01029 NusB family 21 145 2.7E-30 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MSIP34_RS11345 1a1c51e2619597bd3aabc1a7a8195820 158 Gene3D G3DSA:1.10.940.10 17 149 6.5E-39 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MSIP34_RS11645 0867cda23f100542a9dc354b75610a03 189 PANTHER PTHR34606 4 189 9.8E-51 T 23-04-2016 MSIP34_RS11645 0867cda23f100542a9dc354b75610a03 189 PANTHER PTHR34606:SF4 4 189 9.8E-51 T 23-04-2016 MSIP34_RS11645 0867cda23f100542a9dc354b75610a03 189 SMART SM00749 127 189 3.3E-6 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS11645 0867cda23f100542a9dc354b75610a03 189 SMART SM00749 55 113 190.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS11645 0867cda23f100542a9dc354b75610a03 189 Pfam PF04972 BON domain 122 186 2.9E-12 T 23-04-2016 IPR007055 BON domain MSIP34_RS11645 0867cda23f100542a9dc354b75610a03 189 Pfam PF04972 BON domain 56 113 2.5E-11 T 23-04-2016 IPR007055 BON domain MSIP34_RS04110 9413f8acb1c58d783ec14a2b8aff4613 339 Pfam PF16220 Domain of unknown function (DUF4880) 29 69 3.1E-14 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS04110 9413f8acb1c58d783ec14a2b8aff4613 339 Pfam PF04773 FecR protein 132 227 5.4E-19 T 23-04-2016 IPR006860 FecR protein MSIP34_RS04110 9413f8acb1c58d783ec14a2b8aff4613 339 PANTHER PTHR30273:SF3 20 339 4.0E-110 T 23-04-2016 MSIP34_RS04110 9413f8acb1c58d783ec14a2b8aff4613 339 PIRSF PIRSF018266 21 337 3.0E-95 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS04110 9413f8acb1c58d783ec14a2b8aff4613 339 PANTHER PTHR30273 20 339 4.0E-110 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 Pfam PF13353 4Fe-4S single cluster domain 27 129 2.5E-8 T 23-04-2016 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 336 6.8E-115 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 26 37 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 PANTHER PTHR22960 11 287 9.5E-118 T 23-04-2016 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 Pfam PF04055 Radical SAM superfamily 25 184 3.7E-32 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 Pfam PF06463 Molybdenum Cofactor Synthesis C 190 317 8.5E-38 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 SUPERFAMILY SSF102114 11 289 3.79E-76 T 23-04-2016 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 SMART SM00729 20 223 3.4E-13 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 11 336 39.55 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11720 18868627b97a0c7b49b1f1ce540f49a7 336 Gene3D G3DSA:3.20.20.70 11 305 2.3E-74 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 7.5E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 7.5E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 6.7E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 SUPERFAMILY SSF46689 4 69 4.57E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 PANTHER PTHR30055 5 182 1.7E-30 T 23-04-2016 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 SUPERFAMILY SSF48498 76 182 1.33E-8 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 PANTHER PTHR30055:SF47 5 182 1.7E-30 T 23-04-2016 MSIP34_RS11400 59c460532b0900ea15cfbd83af382cad 187 Gene3D G3DSA:1.10.357.10 5 186 5.5E-32 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 SMART SM00749 105 168 2.7E-6 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 PANTHER PTHR34606 100 167 2.0E-15 T 23-04-2016 MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 ProSitePatterns PS00018 EF-hand calcium-binding domain. 71 83 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 PANTHER PTHR34606:SF1 100 167 2.0E-15 T 23-04-2016 MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 Pfam PF04972 BON domain 100 167 4.8E-18 T 23-04-2016 IPR007055 BON domain MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 SUPERFAMILY SSF47473 37 90 4.57E-8 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 Gene3D G3DSA:1.10.238.10 38 97 3.8E-6 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 Pfam PF13202 EF hand 38 55 5.3E-4 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS05775 6ac428d96fec549132ac55caa004b09a 168 Pfam PF13202 EF hand 66 83 0.011 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS12775 9f7e02900f4deb9b1ccda06112b044ee 290 Pfam PF01063 Amino-transferase class IV 31 252 1.6E-43 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS12775 9f7e02900f4deb9b1ccda06112b044ee 290 PANTHER PTHR11825 4 290 5.0E-82 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS12775 9f7e02900f4deb9b1ccda06112b044ee 290 PANTHER PTHR11825:SF38 4 290 5.0E-82 T 23-04-2016 MSIP34_RS12775 9f7e02900f4deb9b1ccda06112b044ee 290 Gene3D G3DSA:3.30.470.10 4 118 1.4E-37 T 23-04-2016 MSIP34_RS12775 9f7e02900f4deb9b1ccda06112b044ee 290 Gene3D G3DSA:3.20.10.10 122 275 6.7E-40 T 23-04-2016 MSIP34_RS12775 9f7e02900f4deb9b1ccda06112b044ee 290 SUPERFAMILY SSF56752 4 275 6.8E-74 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 Gene3D G3DSA:1.10.287.990 20 82 7.3E-25 T 23-04-2016 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 SUPERFAMILY SSF54719 84 193 2.36E-39 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PANTHER PTHR11404:SF8 1 194 2.3E-100 T 23-04-2016 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 3.0E-34 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 8.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 8.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 8.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 8.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 8.2E-22 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 SUPERFAMILY SSF46609 1 84 5.63E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PANTHER PTHR11404 1 194 2.3E-100 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 PIRSF PIRSF000349 1 194 2.5E-80 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS00905 ff4aedfe92fe85bbe3bfe41a2b603859 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.4E-32 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.30.70.270 724 891 5.3E-60 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00052 893 1140 8.5E-108 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SUPERFAMILY SSF53850 81 298 3.23E-41 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SUPERFAMILY SSF55785 350 466 4.34E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 81 296 6.6E-34 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.40.190.10 258 298 3.4E-28 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.40.190.10 78 156 3.4E-28 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Pfam PF00990 Diguanylate cyclase, GGDEF domain 722 879 4.7E-52 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 481 596 2.0E-13 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 601 715 2.3E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 343 469 1.0E-12 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00267 711 883 6.8E-65 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SUPERFAMILY SSF141868 899 1147 2.09E-87 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 PANTHER PTHR10799:SF774 543 596 2.0E-79 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Pfam PF08447 PAS fold 370 457 8.3E-21 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SUPERFAMILY SSF55073 727 884 9.42E-51 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00062 80 298 7.8E-14 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 PANTHER PTHR10799:SF774 755 993 2.0E-79 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.30.450.20 587 701 6.6E-30 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.40.190.10 157 242 2.6E-6 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.30.450.20 471 586 2.2E-18 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.30.450.20 335 470 1.9E-33 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SUPERFAMILY SSF55785 461 587 1.68E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SUPERFAMILY SSF55785 602 709 8.1E-28 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Pfam PF13426 PAS domain 608 710 1.8E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00091 476 541 14.0 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00091 345 414 1.0E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00091 597 663 8.1E-11 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 720 881 2.0E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 PANTHER PTHR10799 543 596 2.0E-79 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Gene3D G3DSA:3.20.20.450 897 1147 4.9E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 PANTHER PTHR10799 755 993 2.0E-79 T 23-04-2016 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00086 547 589 0.058 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00086 421 464 0.52 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 SMART SM00086 669 711 17.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Pfam PF08448 PAS fold 484 591 6.0E-13 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS13680 1309500a98aa677f59c8236fa5305b01 1150 Pfam PF00563 EAL domain 899 1135 2.5E-68 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:1.10.150.200 516 544 5.1E-6 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:1.10.150.200 412 475 5.1E-6 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.20.20.80 305 389 1.2E-77 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.20.20.80 6 98 1.2E-77 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.20.20.80 578 617 1.2E-77 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.20.20.80 742 789 1.2E-77 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.20.20.80 822 874 1.2E-77 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 PANTHER PTHR10357:SF166 734 939 4.7E-150 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 PANTHER PTHR10357:SF166 257 423 4.7E-150 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 PANTHER PTHR10357:SF166 19 127 4.7E-150 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 PANTHER PTHR10357 734 939 4.7E-150 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 PANTHER PTHR10357 257 423 4.7E-150 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 PANTHER PTHR10357 19 127 4.7E-150 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 SMART SM00642 14 493 4.1E-6 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 SUPERFAMILY SSF51445 250 473 2.3E-131 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 SUPERFAMILY SSF51445 500 841 2.3E-131 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 SUPERFAMILY SSF51445 6 176 2.3E-131 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:1.10.10.470 618 735 5.2E-29 T 23-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Pfam PF00128 Alpha amylase, catalytic domain 25 120 1.1E-15 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.30.1590.10 251 289 1.2E-42 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 Gene3D G3DSA:3.30.1590.10 99 182 1.2E-42 T 23-04-2016 MSIP34_RS12890 cea94ca6b2e5299c653cb9b9c6728ef4 944 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 6 940 8.3E-299 T 23-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 PANTHER PTHR14359:SF20 6 392 2.2E-171 T 23-04-2016 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 SUPERFAMILY SSF52507 7 176 3.27E-62 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 SUPERFAMILY SSF102645 183 392 1.31E-72 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 Gene3D G3DSA:3.40.50.1950 6 184 1.8E-68 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 Gene3D G3DSA:3.40.50.10300 185 392 2.5E-81 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 364 5.9E-67 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 388 1.3E-137 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 Pfam PF02441 Flavoprotein 7 134 1.4E-36 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 MSIP34_RS01750 ef2d8ef3fc91aa71172d52a82569fa00 404 PANTHER PTHR14359 6 392 2.2E-171 T 23-04-2016 MSIP34_RS07840 e5d5001ff4235a6f507bbeced57a6b35 163 PANTHER PTHR36926:SF1 1 133 1.1E-35 T 23-04-2016 MSIP34_RS07840 e5d5001ff4235a6f507bbeced57a6b35 163 Pfam PF02674 Colicin V production protein 4 143 1.5E-37 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 MSIP34_RS07840 e5d5001ff4235a6f507bbeced57a6b35 163 PANTHER PTHR36926 1 133 1.1E-35 T 23-04-2016 MSIP34_RS00575 4fb6cb2712acb31ba556299b3479b6b4 264 Gene3D G3DSA:1.10.3720.10 65 253 1.3E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS00575 4fb6cb2712acb31ba556299b3479b6b4 264 PANTHER PTHR30151:SF8 15 260 2.9E-56 T 23-04-2016 MSIP34_RS00575 4fb6cb2712acb31ba556299b3479b6b4 264 PANTHER PTHR30151 15 260 2.9E-56 T 23-04-2016 MSIP34_RS00575 4fb6cb2712acb31ba556299b3479b6b4 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 251 7.3E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS00575 4fb6cb2712acb31ba556299b3479b6b4 264 SUPERFAMILY SSF161098 63 245 7.06E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 PANTHER PTHR11680:SF9 12 414 1.6E-264 T 23-04-2016 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 PIRSF PIRSF000412 1 415 2.4E-165 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 Gene3D G3DSA:3.40.640.10 37 282 2.9E-104 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 Gene3D G3DSA:3.90.1150.10 283 414 3.2E-56 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 Pfam PF00464 Serine hydroxymethyltransferase 9 383 3.3E-170 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 51.733 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 PANTHER PTHR11680 12 414 1.6E-264 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 MSIP34_RS04250 e15fba2b10de130e42cfd9d1090f6dd8 415 SUPERFAMILY SSF53383 8 414 1.36E-178 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 PANTHER PTHR11444:SF17 5 456 8.3E-277 T 23-04-2016 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 Gene3D G3DSA:1.10.275.10 1 119 4.0E-44 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 9.9E-126 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 SUPERFAMILY SSF48557 2 434 2.2E-101 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 446 1.1E-50 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 Gene3D G3DSA:1.20.200.10 120 389 1.3E-85 T 23-04-2016 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.7E-18 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 Gene3D G3DSA:1.10.40.30 390 446 1.9E-30 T 23-04-2016 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 Pfam PF00206 Lyase 14 312 5.8E-60 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 MSIP34_RS05050 42e97d32e92ed2ff34d0044b41c2a9bf 456 PANTHER PTHR11444 5 456 8.3E-277 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PANTHER PTHR23504:SF37 1 428 8.2E-119 T 23-04-2016 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 Gene3D G3DSA:1.20.1250.20 18 190 3.1E-28 T 23-04-2016 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 Gene3D G3DSA:1.20.1250.20 209 394 4.6E-22 T 23-04-2016 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PRINTS PR01035 Tetracycline resistance protein signature 109 130 9.0E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PRINTS PR01035 Tetracycline resistance protein signature 24 40 9.0E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PRINTS PR01035 Tetracycline resistance protein signature 275 296 9.0E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PRINTS PR01035 Tetracycline resistance protein signature 52 71 9.0E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PRINTS PR01035 Tetracycline resistance protein signature 139 161 9.0E-7 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 Pfam PF07690 Major Facilitator Superfamily 20 348 4.8E-41 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 SUPERFAMILY SSF103473 13 393 4.05E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS12505 b7bb18c237223f364f9e25408556564d 458 PANTHER PTHR23504 1 428 8.2E-119 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 SUPERFAMILY SSF52540 230 468 4.14E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 SUPERFAMILY SSF52540 35 99 4.14E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PANTHER PTHR10046 68 692 1.3E-102 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PANTHER PTHR10046:SF46 68 692 1.3E-102 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 SUPERFAMILY SSF54211 496 689 1.52E-28 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 Pfam PF13654 AAA domain 149 471 8.0E-63 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 Pfam PF13654 AAA domain 31 133 7.9E-24 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 578 597 1.3E-14 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 497 513 1.3E-14 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 638 656 1.3E-14 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 1.3E-14 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 608 627 1.3E-14 T 23-04-2016 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 Gene3D G3DSA:3.30.230.10 495 687 1.3E-24 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 581 664 7.9E-8 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 Gene3D G3DSA:3.40.50.300 166 233 3.8E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08765 910d76a2871e4ed530ad6ce0cd64d11e 727 Gene3D G3DSA:3.40.50.300 54 84 3.8E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08785 b37c09a26ac8277367b48b9d03171aea 575 Pfam PF05226 CHASE2 domain 32 344 9.0E-54 T 23-04-2016 IPR007890 CHASE2 MSIP34_RS08785 b37c09a26ac8277367b48b9d03171aea 575 SMART SM01080 45 349 5.0E-59 T 23-04-2016 IPR007890 CHASE2 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 25 134 5.4E-24 T 23-04-2016 IPR016188 PurM-like, N-terminal domain MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 317 4.4E-101 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 PIRSF PIRSF005303 2 317 4.5E-81 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 SUPERFAMILY SSF55326 4 134 3.84E-35 T 23-04-2016 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 146 300 4.9E-8 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 PANTHER PTHR30270:SF0 1 318 8.0E-107 T 23-04-2016 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 PANTHER PTHR30270 1 318 8.0E-107 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 SUPERFAMILY SSF56042 139 301 5.08E-36 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 314 28.494 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 Gene3D G3DSA:3.90.650.10 141 317 2.5E-44 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS10985 ff4e612523ed9490e7ee3ebbc649cffa 318 Gene3D G3DSA:3.30.1330.10 3 137 3.3E-45 T 23-04-2016 IPR016188 PurM-like, N-terminal domain MSIP34_RS08025 9e1db3b02af6e517cdb3a40ab3110aa3 403 Pfam PF03929 PepSY-associated TM region 8 392 4.3E-53 T 23-04-2016 IPR005625 PepSY-associated TM protein MSIP34_RS08025 9e1db3b02af6e517cdb3a40ab3110aa3 403 PANTHER PTHR34219 1 393 1.8E-45 T 23-04-2016 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 PANTHER PTHR24421:SF1 264 469 5.1E-33 T 23-04-2016 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 PANTHER PTHR24421:SF1 5 14 5.1E-33 T 23-04-2016 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 Pfam PF07730 Histidine kinase 269 335 3.8E-11 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 SUPERFAMILY SSF55874 341 465 1.96E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 SMART SM00387 374 469 2.3E-4 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 PANTHER PTHR24421 264 469 5.1E-33 T 23-04-2016 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 PANTHER PTHR24421 5 14 5.1E-33 T 23-04-2016 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 Pfam PF05227 CHASE3 domain 61 188 3.9E-14 T 23-04-2016 IPR007891 CHASE3 MSIP34_RS05745 e69afacd4118b24f9646868112bf7d4c 470 Gene3D G3DSA:3.30.565.10 378 465 1.9E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 Gene3D G3DSA:1.10.560.10 369 518 3.3E-43 T 23-04-2016 IPR027413 GroEL-like equatorial domain MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.1E-257 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 SUPERFAMILY SSF48592 406 521 1.98E-77 T 23-04-2016 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 SUPERFAMILY SSF48592 7 134 1.98E-77 T 23-04-2016 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 SUPERFAMILY SSF52029 184 376 2.97E-83 T 23-04-2016 IPR027409 GroEL-like apical domain MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 Gene3D G3DSA:1.10.560.10 3 188 6.7E-48 T 23-04-2016 IPR027413 GroEL-like equatorial domain MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 PANTHER PTHR11353 2 539 6.3E-253 T 23-04-2016 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 Hamap MF_00600 60 kDa chaperonin [groL]. 2 540 41.277 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 PRINTS PR00298 60kDa chaperonin signature 398 419 4.1E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 PRINTS PR00298 60kDa chaperonin signature 27 53 4.1E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 PRINTS PR00298 60kDa chaperonin signature 350 375 4.1E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 PRINTS PR00298 60kDa chaperonin signature 268 291 4.1E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 PRINTS PR00298 60kDa chaperonin signature 83 110 4.1E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 Gene3D G3DSA:3.50.7.10 189 368 1.7E-99 T 23-04-2016 IPR027409 GroEL-like apical domain MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 4.0E-99 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 SUPERFAMILY SSF54849 137 204 6.87E-25 T 23-04-2016 MSIP34_RS11540 8f0e4e814ead18f65b396c41517ffd8e 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 MSIP34_RS09295 d2f4a35a244bc72b77bbfaa23ed302ff 305 Pfam PF13624 SurA N-terminal domain 9 94 2.6E-9 T 23-04-2016 MSIP34_RS09295 d2f4a35a244bc72b77bbfaa23ed302ff 305 SUPERFAMILY SSF109998 29 156 5.1E-15 T 23-04-2016 IPR027304 Trigger factor/SurA domain MSIP34_RS09295 d2f4a35a244bc72b77bbfaa23ed302ff 305 Pfam PF13145 PPIC-type PPIASE domain 121 239 2.0E-12 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 MSIP34_RS09295 d2f4a35a244bc72b77bbfaa23ed302ff 305 TIGRFAM TIGR02925 cis_trans_EpsD: peptidyl-prolyl cis-trans isomerase, EpsD family 8 232 4.5E-83 T 23-04-2016 IPR014274 Peptidyl-prolyl cis-trans isomerase, EpsD-type MSIP34_RS09945 148c81fe2308b21678111f083db982db 588 PANTHER PTHR30443 10 580 9.5E-234 T 23-04-2016 MSIP34_RS09945 148c81fe2308b21678111f083db982db 588 Gene3D G3DSA:3.40.720.10 248 503 4.2E-17 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS09945 148c81fe2308b21678111f083db982db 588 PANTHER PTHR30443:SF2 10 580 9.5E-234 T 23-04-2016 MSIP34_RS09945 148c81fe2308b21678111f083db982db 588 Pfam PF00884 Sulfatase 245 531 2.1E-40 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 MSIP34_RS09945 148c81fe2308b21678111f083db982db 588 SUPERFAMILY SSF53649 245 553 1.18E-27 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 Gene3D G3DSA:3.40.470.10 3 219 1.6E-74 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 SMART SM00986 47 209 1.8E-27 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 8 219 33.399 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 SMART SM00987 47 209 1.8E-27 T 23-04-2016 MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 PANTHER PTHR11264 1 219 6.8E-82 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 SUPERFAMILY SSF52141 6 219 6.71E-69 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 Pfam PF03167 Uracil DNA glycosylase superfamily 50 208 1.2E-22 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS02505 ddeeb6a72f3845a38d4d5da1d79ef5d9 219 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 20 211 2.2E-59 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PANTHER PTHR30034 2 320 7.5E-134 T 23-04-2016 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.0E-75 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 SUPERFAMILY SSF103039 7 14 1.74E-22 T 23-04-2016 IPR028976 CheC-like domain MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 SUPERFAMILY SSF103039 54 229 1.74E-22 T 23-04-2016 IPR028976 CheC-like domain MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PIRSF PIRSF002888 2 328 6.4E-98 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 SUPERFAMILY SSF101801 248 322 3.14E-14 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 Gene3D G3DSA:3.40.1550.10 72 220 6.4E-4 T 23-04-2016 IPR028976 CheC-like domain MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 8.3E-21 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 4.0E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 4.0E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 4.0E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 4.0E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 PANTHER PTHR30034:SF0 2 320 7.5E-134 T 23-04-2016 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 Gene3D G3DSA:2.30.330.10 246 321 1.4E-9 T 23-04-2016 MSIP34_RS03900 a6263769d70d2085219673115b8a3f54 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 9.9E-105 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 PANTHER PTHR33910:SF1 1 114 4.5E-18 T 23-04-2016 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 58 110 4.0E-20 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 57 111 1.1E-18 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 Gene3D G3DSA:1.20.5.1030 53 111 3.1E-23 T 23-04-2016 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 PANTHER PTHR33910 1 114 4.5E-18 T 23-04-2016 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 PRINTS PR01650 Bacterial translocase SecE signature 53 73 3.2E-13 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 PRINTS PR01650 Bacterial translocase SecE signature 77 97 3.2E-13 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 PRINTS PR01650 Bacterial translocase SecE signature 32 53 3.2E-13 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 MSIP34_RS01515 30dded90a2626177378440e7cd35f916 115 Hamap MF_00422 Protein translocase subunit SecE [secE]. 55 110 12.184 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PIRSF PIRSF000904 1 333 2.8E-118 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PIRSF PIRSF500210 1 333 1.9E-121 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 6.1E-63 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 6.1E-63 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 6.1E-63 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 6.1E-63 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 6.1E-63 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 6.1E-63 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 SUPERFAMILY SSF56655 2 330 6.0E-109 T 23-04-2016 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 PANTHER PTHR11556 3 330 1.2E-149 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 272 284 - T 23-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 43.733 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 Gene3D G3DSA:3.30.540.10 4 194 1.2E-72 T 23-04-2016 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 4 193 1.2E-58 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS10950 346875b4b86cbb13f903623109d89451 333 Gene3D G3DSA:3.40.190.80 195 330 4.7E-52 T 23-04-2016 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 SUPERFAMILY SSF82689 181 281 2.22E-19 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 PANTHER PTHR30460 5 295 5.0E-81 T 23-04-2016 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 Gene3D G3DSA:3.30.70.100 188 272 6.9E-10 T 23-04-2016 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 SUPERFAMILY SSF50182 117 180 1.34E-14 T 23-04-2016 IPR010920 LSM domain MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 PANTHER PTHR30460:SF0 5 295 5.0E-81 T 23-04-2016 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 SUPERFAMILY SSF82861 24 115 2.48E-13 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 Pfam PF00924 Mechanosensitive ion channel 74 274 1.4E-38 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 MSIP34_RS13860 87a1eac9fefedc94cad1acff0a3ee6bd 298 Gene3D G3DSA:2.30.30.60 132 178 2.4E-14 T 23-04-2016 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 Pfam PF02548 Ketopantoate hydroxymethyltransferase 1 257 3.5E-105 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 5 262 2.1E-93 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 SUPERFAMILY SSF51621 3 262 9.81E-95 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 PIRSF PIRSF000388 1 262 5.7E-97 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 PANTHER PTHR20881 1 262 1.1E-123 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 1 262 39.653 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 MSIP34_RS10890 d4424444fee7c28656d7f9e7179b1693 262 Gene3D G3DSA:3.20.20.60 2 262 1.4E-104 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 Gene3D G3DSA:3.30.420.40 198 317 1.1E-27 T 23-04-2016 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 PIRSF PIRSF019169 2 356 9.2E-133 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 SMART SM00842 13 182 6.8E-4 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 13 355 2.6E-105 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 Gene3D G3DSA:3.30.420.40 9 105 4.4E-4 T 23-04-2016 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 PANTHER PTHR32432 1 355 3.8E-78 T 23-04-2016 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 Pfam PF11104 Type IV pilus assembly protein PilM; 15 354 8.6E-144 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 PANTHER PTHR32432:SF3 1 355 3.8E-78 T 23-04-2016 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 SUPERFAMILY SSF53067 190 352 9.91E-27 T 23-04-2016 MSIP34_RS12605 579014ed7d91017540f0cea5e9d90d89 357 SUPERFAMILY SSF53067 61 176 1.47E-12 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 40 493 6.6E-114 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Pfam PF02321 Outer membrane efflux protein 91 282 9.0E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Pfam PF02321 Outer membrane efflux protein 315 491 1.5E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 PANTHER PTHR30203 19 509 4.9E-120 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 PANTHER PTHR30203:SF6 19 509 4.9E-120 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Gene3D G3DSA:2.20.200.10 343 378 3.9E-22 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Gene3D G3DSA:2.20.200.10 127 169 3.9E-22 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Gene3D G3DSA:1.20.1600.10 170 342 6.9E-76 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Gene3D G3DSA:1.20.1600.10 77 117 6.9E-76 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 Gene3D G3DSA:1.20.1600.10 380 493 6.9E-76 T 23-04-2016 MSIP34_RS05510 99935356bf89c773a27f7c0b5d82dbba 523 SUPERFAMILY SSF56954 27 494 6.54E-85 T 23-04-2016 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 Gene3D G3DSA:3.40.50.2300 5 144 1.0E-14 T 23-04-2016 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 PANTHER PTHR26402 4 199 3.6E-20 T 23-04-2016 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 Pfam PF00072 Response regulator receiver domain 6 114 1.2E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 SUPERFAMILY SSF46894 134 203 7.14E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 PANTHER PTHR26402:SF598 4 199 3.6E-20 T 23-04-2016 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 SUPERFAMILY SSF52172 4 121 2.85E-14 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 197 1.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 SMART SM00448 4 115 7.3E-6 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 Gene3D G3DSA:1.10.10.10 145 203 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 SMART SM00421 140 197 7.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 7.2E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 7.2E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06950 4363b506f980c0181a144fb279adc7ca 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 7.2E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS09630 dc0e3f9fea572100560bcc8e687d5748 380 SUPERFAMILY SSF53756 3 354 3.87E-56 T 23-04-2016 MSIP34_RS09630 dc0e3f9fea572100560bcc8e687d5748 380 PANTHER PTHR12526:SF220 4 352 2.3E-67 T 23-04-2016 MSIP34_RS09630 dc0e3f9fea572100560bcc8e687d5748 380 PANTHER PTHR12526 4 352 2.3E-67 T 23-04-2016 MSIP34_RS09630 dc0e3f9fea572100560bcc8e687d5748 380 Pfam PF00534 Glycosyl transferases group 1 192 348 1.4E-26 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS09630 dc0e3f9fea572100560bcc8e687d5748 380 Gene3D G3DSA:3.40.50.2000 159 346 1.9E-17 T 23-04-2016 MSIP34_RS09630 dc0e3f9fea572100560bcc8e687d5748 380 Pfam PF13439 Glycosyltransferase Family 4 13 174 1.4E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Pfam PF04679 ATP dependent DNA ligase C terminal region 443 538 5.3E-26 T 23-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 SUPERFAMILY SSF56091 228 425 5.55E-48 T 23-04-2016 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 582 826 1.7E-99 T 23-04-2016 IPR014145 DNA ligase D, polymerase domain MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Pfam PF01068 ATP dependent DNA ligase domain 250 424 2.2E-30 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Gene3D G3DSA:3.30.1490.70 231 260 2.7E-18 T 23-04-2016 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Gene3D G3DSA:3.30.1490.70 382 425 2.7E-18 T 23-04-2016 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Gene3D G3DSA:3.30.470.30 261 368 8.8E-31 T 23-04-2016 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 PANTHER PTHR10459 232 705 3.3E-80 T 23-04-2016 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 SUPERFAMILY SSF50249 428 546 4.71E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Pfam PF13298 DNA polymerase Ligase (LigD) 34 138 8.7E-40 T 23-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 401 424 - T 23-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 Gene3D G3DSA:2.40.50.140 428 546 8.6E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 248 856 8.3E-221 T 23-04-2016 IPR014143 DNA ligase D MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 238 544 1.4E-106 T 23-04-2016 IPR014146 DNA ligase D, ligase domain MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 3 161 4.4E-67 T 23-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain MSIP34_RS12920 4c1a332dcc5eecec701d13c612bbbd4a 870 PANTHER PTHR10459:SF70 232 705 3.3E-80 T 23-04-2016 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 Pfam PF00459 Inositol monophosphatase family 2 252 6.2E-65 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PANTHER PTHR20854:SF4 1 269 1.1E-99 T 23-04-2016 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 7.8E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.8E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 7.8E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 7.8E-26 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 Gene3D G3DSA:3.30.540.10 3 149 9.3E-54 T 23-04-2016 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 1.6E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 1.6E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.6E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 1.6E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.6E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.6E-59 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 SUPERFAMILY SSF56655 1 260 7.72E-87 T 23-04-2016 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 PANTHER PTHR20854 1 269 1.1E-99 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 MSIP34_RS09325 8730d6f7794a6eac85d82d57ac276036 269 Gene3D G3DSA:3.40.190.80 150 260 1.7E-38 T 23-04-2016 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 SUPERFAMILY SSF47729 3 92 7.65E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 4.6E-44 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.322 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 Gene3D G3DSA:4.10.520.10 2 93 2.2E-36 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 Pfam PF00216 Bacterial DNA-binding protein 3 91 7.0E-31 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 4.7E-14 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 4.7E-14 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 4.7E-14 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 PANTHER PTHR33175:SF2 3 94 1.0E-48 T 23-04-2016 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 SMART SM00411 3 92 2.6E-40 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 PANTHER PTHR33175 3 94 1.0E-48 T 23-04-2016 MSIP34_RS03700 004ea523fee41eaac5a7c43511e20e04 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MSIP34_RS02430 aa2b516cedabe90b613bac9f70c6d32f 141 SUPERFAMILY SSF49764 16 140 7.63E-36 T 23-04-2016 IPR008978 HSP20-like chaperone MSIP34_RS02430 aa2b516cedabe90b613bac9f70c6d32f 141 PANTHER PTHR11527 18 141 9.0E-27 T 23-04-2016 IPR031107 Small heat shock protein HSP20 MSIP34_RS02430 aa2b516cedabe90b613bac9f70c6d32f 141 Pfam PF00011 Hsp20/alpha crystallin family 40 140 2.0E-22 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain MSIP34_RS02430 aa2b516cedabe90b613bac9f70c6d32f 141 PANTHER PTHR11527:SF119 18 141 9.0E-27 T 23-04-2016 MSIP34_RS02430 aa2b516cedabe90b613bac9f70c6d32f 141 Gene3D G3DSA:2.60.40.790 7 141 4.0E-37 T 23-04-2016 IPR008978 HSP20-like chaperone MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 PANTHER PTHR10799 553 791 1.3E-86 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 PANTHER PTHR10799 357 509 1.3E-86 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00052 691 937 8.5E-98 T 23-04-2016 IPR001633 EAL domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Pfam PF13426 PAS domain 29 127 2.3E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SUPERFAMILY SSF55785 254 381 8.03E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Gene3D G3DSA:3.30.450.20 139 255 3.0E-21 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SUPERFAMILY SSF55785 380 507 2.62E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 268 387 1.1E-10 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 515 1.6E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 23 136 8.6E-15 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 264 1.5E-13 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SUPERFAMILY SSF55073 525 683 2.28E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Gene3D G3DSA:3.30.70.270 521 688 1.1E-58 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Pfam PF00990 Diguanylate cyclase, GGDEF domain 520 676 4.5E-51 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SUPERFAMILY SSF55785 126 255 1.8E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Gene3D G3DSA:3.20.20.450 696 941 9.3E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Pfam PF08448 PAS fold 147 259 9.3E-13 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Pfam PF08448 PAS fold 402 510 3.9E-13 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Pfam PF08448 PAS fold 276 384 8.4E-17 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Gene3D G3DSA:3.30.450.20 27 138 5.3E-17 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Pfam PF00563 EAL domain 698 932 1.1E-69 T 23-04-2016 IPR001633 EAL domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Gene3D G3DSA:3.30.450.20 382 507 1.3E-17 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SUPERFAMILY SSF141868 698 941 1.96E-81 T 23-04-2016 IPR001633 EAL domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00267 509 681 2.1E-67 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 PANTHER PTHR10799:SF774 553 791 1.3E-86 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 PANTHER PTHR10799:SF774 357 509 1.3E-86 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00091 18 84 1.8E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00091 141 209 3.4E-4 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00091 269 336 0.21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00091 395 461 1.7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 519 679 1.5E-42 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 Gene3D G3DSA:3.30.450.20 259 381 8.5E-21 T 23-04-2016 MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SUPERFAMILY SSF55785 29 137 4.19E-19 T 23-04-2016 IPR000014 PAS domain MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00086 215 257 0.48 T 23-04-2016 IPR001610 PAC motif MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00086 467 509 0.061 T 23-04-2016 IPR001610 PAC motif MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00086 342 383 4.3 T 23-04-2016 IPR001610 PAC motif MSIP34_RS14090 47a3774a8954cbfe0b8b272b702893a4 949 SMART SM00086 89 129 530.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PANTHER PTHR11735:SF6 1 345 2.0E-150 T 23-04-2016 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 7.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 7.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 7.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 7.9E-51 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 336 61.992 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 Gene3D G3DSA:3.30.420.40 1 159 1.7E-47 T 23-04-2016 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 319 2.3E-132 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 Pfam PF00814 Glycoprotease family 24 312 4.3E-98 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 311 2.6E-116 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 SUPERFAMILY SSF53067 2 121 1.75E-29 T 23-04-2016 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 PANTHER PTHR11735 1 345 2.0E-150 T 23-04-2016 MSIP34_RS11990 a9b41f11eab81169d9a8eb0adfed476c 346 SUPERFAMILY SSF53067 101 314 1.42E-42 T 23-04-2016 MSIP34_RS13870 98ece835626b578cf8d66df9424b40b1 412 SUPERFAMILY SSF103473 18 410 4.32E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS13870 98ece835626b578cf8d66df9424b40b1 412 Gene3D G3DSA:1.20.1250.20 13 205 1.8E-14 T 23-04-2016 MSIP34_RS13870 98ece835626b578cf8d66df9424b40b1 412 PANTHER PTHR23513 1 405 3.0E-83 T 23-04-2016 MSIP34_RS13870 98ece835626b578cf8d66df9424b40b1 412 Gene3D G3DSA:1.20.1250.20 236 407 3.1E-10 T 23-04-2016 MSIP34_RS13870 98ece835626b578cf8d66df9424b40b1 412 Pfam PF07690 Major Facilitator Superfamily 28 361 6.6E-26 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS13870 98ece835626b578cf8d66df9424b40b1 412 PANTHER PTHR23513:SF9 1 405 3.0E-83 T 23-04-2016 MSIP34_RS12080 c49e16fad7bf8868e019512535a818fc 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 210 3.0E-42 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS12080 c49e16fad7bf8868e019512535a818fc 224 PANTHER PTHR30625 1 222 3.3E-66 T 23-04-2016 MSIP34_RS12080 c49e16fad7bf8868e019512535a818fc 224 PANTHER PTHR30625:SF3 1 222 3.3E-66 T 23-04-2016 MSIP34_RS12080 c49e16fad7bf8868e019512535a818fc 224 TIGRFAM TIGR02796 tolQ: protein TolQ 9 222 4.7E-87 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.6E-64 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 6.0E-16 T 23-04-2016 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 SUPERFAMILY SSF54747 3 73 3.53E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.9E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 SUPERFAMILY SSF46906 68 141 2.88E-26 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 Gene3D G3DSA:1.10.10.250 73 141 8.4E-31 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.0E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 Gene3D G3DSA:3.30.1550.10 2 72 2.2E-37 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 SMART SM00649 9 141 1.7E-83 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.231 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01525 50484f39d9686198aa19445213d51cd8 143 PANTHER PTHR11661 1 142 6.6E-73 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05420 ac784cbe7933566e1a64c02c5b8358c8 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 1.7E-8 T 23-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 MSIP34_RS05420 ac784cbe7933566e1a64c02c5b8358c8 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 7 29 4.1E-9 T 23-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 SUPERFAMILY SSF46934 3 56 2.65E-14 T 23-04-2016 IPR009060 UBA-like GO:0005515 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 290 1.5E-89 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Gene3D G3DSA:1.10.286.20 193 236 4.6E-16 T 23-04-2016 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Gene3D G3DSA:1.10.8.10 2 55 4.6E-23 T 23-04-2016 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 PANTHER PTHR11741 1 291 1.1E-106 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 SUPERFAMILY SSF54713 151 289 1.57E-47 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Gene3D G3DSA:3.30.479.20 237 275 1.5E-31 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Gene3D G3DSA:3.30.479.20 176 191 1.5E-31 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Gene3D G3DSA:3.30.479.20 57 95 1.5E-31 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 SUPERFAMILY SSF54713 56 146 8.11E-22 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Pfam PF00889 Elongation factor TS 73 272 5.0E-65 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 MSIP34_RS07165 443d3e416ded3bdb3ad77d66f33b7e6d 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 74.496 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 MSIP34_RS11415 4651757f38bea3c4ecfbbe960342e551 249 Pfam PF13444 Acetyltransferase (GNAT) domain 34 134 1.7E-33 T 23-04-2016 MSIP34_RS11415 4651757f38bea3c4ecfbbe960342e551 249 PANTHER PTHR37323 17 247 1.1E-70 T 23-04-2016 MSIP34_RS11415 4651757f38bea3c4ecfbbe960342e551 249 PANTHER PTHR37323:SF1 17 247 1.1E-70 T 23-04-2016 MSIP34_RS11415 4651757f38bea3c4ecfbbe960342e551 249 Gene3D G3DSA:3.40.630.30 19 220 7.1E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS11415 4651757f38bea3c4ecfbbe960342e551 249 SUPERFAMILY SSF55729 16 223 3.72E-45 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 SUPERFAMILY SSF48557 18 469 2.36E-153 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 TIGRFAM TIGR00838 argH: argininosuccinate lyase 18 469 3.4E-194 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PANTHER PTHR11444 13 469 1.8E-234 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 Pfam PF00206 Lyase 20 314 4.7E-79 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 Pfam PF14698 Argininosuccinate lyase C-terminal 377 444 2.4E-25 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 Gene3D G3DSA:1.10.275.10 16 120 2.4E-40 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00145 Argininosuccinate lyase family signature 245 269 2.5E-68 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00145 Argininosuccinate lyase family signature 156 176 2.5E-68 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00145 Argininosuccinate lyase family signature 207 223 2.5E-68 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00145 Argininosuccinate lyase family signature 289 305 2.5E-68 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00145 Argininosuccinate lyase family signature 115 137 2.5E-68 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00145 Argininosuccinate lyase family signature 324 343 2.5E-68 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PANTHER PTHR11444:SF3 13 469 1.8E-234 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00149 Fumarate lyase superfamily signature 289 305 1.2E-31 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 1.2E-31 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00149 Fumarate lyase superfamily signature 245 272 1.2E-31 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 PRINTS PR00149 Fumarate lyase superfamily signature 116 134 1.2E-31 T 23-04-2016 IPR000362 Fumarate lyase family MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 Hamap MF_00006 Argininosuccinate lyase [argH]. 16 467 44.596 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 ProSitePatterns PS00163 Fumarate lyases signature. 289 298 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 Gene3D G3DSA:1.20.200.10 121 387 9.0E-112 T 23-04-2016 MSIP34_RS00185 e9bedb13748db3c822e35917c460dcdf 470 Gene3D G3DSA:1.10.40.30 388 444 1.0E-31 T 23-04-2016 MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 SUPERFAMILY SSF69118 1 175 1.95E-46 T 23-04-2016 IPR029032 AhpD-like MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 PANTHER PTHR35446:SF1 21 171 1.3E-29 T 23-04-2016 MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 57 101 6.2E-12 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 Pfam PF02627 Carboxymuconolactone decarboxylase family 41 122 1.7E-13 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 Gene3D G3DSA:1.20.1290.10 1 92 3.5E-36 T 23-04-2016 IPR029032 AhpD-like MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 Gene3D G3DSA:1.20.1290.10 141 175 3.5E-36 T 23-04-2016 IPR029032 AhpD-like MSIP34_RS13270 b96bb051e4b7de008055b6d3529da629 177 PANTHER PTHR35446 21 171 1.3E-29 T 23-04-2016 MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 318 481 9.5E-50 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 PANTHER PTHR10799 344 478 3.2E-31 T 23-04-2016 MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 Pfam PF00990 Diguanylate cyclase, GGDEF domain 322 478 2.7E-48 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 SMART SM00267 311 482 1.1E-63 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 SUPERFAMILY SSF55073 327 481 1.57E-51 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 Pfam PF02743 Cache domain 50 274 3.4E-15 T 23-04-2016 IPR033479 Double Cache domain 1 MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 Gene3D G3DSA:3.30.450.20 163 288 1.0E-10 T 23-04-2016 MSIP34_RS04395 c8b06e2be0d1724fd48372f021a1e780 487 Gene3D G3DSA:3.30.70.270 324 482 1.7E-55 T 23-04-2016 MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 4 368 38.553 T 23-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 SMART SM00471 60 204 1.9E-10 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Gene3D G3DSA:1.10.3210.10 10 190 3.1E-58 T 23-04-2016 IPR006674 HD domain MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Pfam PF13286 Phosphohydrolase-associated domain 280 366 2.9E-28 T 23-04-2016 IPR026875 Phosphohydrolase-associated domain MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Gene3D G3DSA:1.10.3550.10 341 365 6.8E-6 T 23-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Gene3D G3DSA:1.10.3550.10 291 326 9.6E-4 T 23-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 27 369 3.7E-94 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 PANTHER PTHR11373:SF25 4 374 3.9E-77 T 23-04-2016 MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Gene3D G3DSA:1.10.3410.10 191 290 5.7E-20 T 23-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 PANTHER PTHR11373 4 374 3.9E-77 T 23-04-2016 MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 SUPERFAMILY SSF109604 16 369 5.16E-92 T 23-04-2016 MSIP34_RS12570 270ebe4eec853f2191327c67daa7784c 375 Pfam PF01966 HD domain 64 194 1.3E-14 T 23-04-2016 IPR006674 HD domain MSIP34_RS01435 376ac22fbae8ad2a5eda22560a564c66 72 Pfam PF02416 mttA/Hcf106 family 5 49 2.4E-13 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 MSIP34_RS01435 376ac22fbae8ad2a5eda22560a564c66 72 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 71 22.22 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MSIP34_RS01435 376ac22fbae8ad2a5eda22560a564c66 72 PANTHER PTHR33162 1 45 1.0E-15 T 23-04-2016 MSIP34_RS01435 376ac22fbae8ad2a5eda22560a564c66 72 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.5E-23 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 SUPERFAMILY SSF47729 1 90 5.59E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-19 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-19 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-19 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 PANTHER PTHR33175 1 90 4.4E-43 T 23-04-2016 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 Gene3D G3DSA:4.10.520.10 1 90 4.0E-38 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 SMART SM00411 1 90 2.4E-44 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS13820 eef14f40bdb6bd3ae64d9a02a2447933 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 8.1E-35 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 SUPERFAMILY SSF56601 3 30 1.14E-58 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 SUPERFAMILY SSF56601 81 320 1.14E-58 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 PANTHER PTHR21581 76 325 2.7E-92 T 23-04-2016 MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 120 7.2E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 186 199 7.2E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 159 176 7.2E-12 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 PANTHER PTHR21581:SF8 76 325 2.7E-92 T 23-04-2016 MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 Gene3D G3DSA:3.40.710.10 78 320 2.2E-67 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS01270 a38e6d4af751306779db072b6ef2586e 330 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 78 303 8.8E-56 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 Gene3D G3DSA:3.40.50.300 6 231 1.1E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 SMART SM00382 37 224 3.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 Pfam PF12704 MacB-like periplasmic core domain 296 513 1.4E-33 T 23-04-2016 IPR025857 MacB-like periplasmic core domain MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 PANTHER PTHR24220 9 396 2.9E-111 T 23-04-2016 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 PANTHER PTHR24220:SF578 9 396 2.9E-111 T 23-04-2016 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 Gene3D G3DSA:1.20.1250.20 297 319 9.0E-5 T 23-04-2016 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 Gene3D G3DSA:1.20.1250.20 541 646 9.0E-5 T 23-04-2016 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 SUPERFAMILY SSF52540 7 230 2.79E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 Pfam PF02687 FtsX-like permease family 549 661 2.1E-19 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 MSIP34_RS02185 d69535ce0c747d112bb53ebb903c3171 668 Pfam PF00005 ABC transporter 28 176 1.2E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS03410 dc0a77bd7154d2c0fee29b6936c714d1 568 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 558 1.8E-146 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 MSIP34_RS03410 dc0a77bd7154d2c0fee29b6936c714d1 568 Pfam PF02272 DHHA1 domain 376 439 1.1E-14 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 MSIP34_RS03410 dc0a77bd7154d2c0fee29b6936c714d1 568 SUPERFAMILY SSF64182 48 460 6.28E-116 T 23-04-2016 MSIP34_RS03410 dc0a77bd7154d2c0fee29b6936c714d1 568 PANTHER PTHR30255 5 568 3.4E-194 T 23-04-2016 MSIP34_RS03410 dc0a77bd7154d2c0fee29b6936c714d1 568 PANTHER PTHR30255:SF2 5 568 3.4E-194 T 23-04-2016 MSIP34_RS03410 dc0a77bd7154d2c0fee29b6936c714d1 568 Pfam PF01368 DHH family 76 202 3.0E-10 T 23-04-2016 IPR001667 DDH domain MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.9E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 PANTHER PTHR15893 1 85 2.5E-46 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 Gene3D G3DSA:2.40.50.100 20 84 8.5E-30 T 23-04-2016 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 71 8.0E-16 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 SUPERFAMILY SSF110324 2 81 2.06E-32 T 23-04-2016 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.837 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02615 26bdee1b622e423acd9204a37086a9c4 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.2E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 PANTHER PTHR24220:SF589 30 266 6.9E-101 T 23-04-2016 MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 Pfam PF00005 ABC transporter 48 187 4.4E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 Gene3D G3DSA:3.40.50.300 19 242 3.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 SUPERFAMILY SSF52540 29 260 5.06E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 PANTHER PTHR24220 30 266 6.9E-101 T 23-04-2016 MSIP34_RS00550 89013b515d40195bb930af904d81a412 271 SMART SM00382 57 250 8.7E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 Gene3D G3DSA:3.40.50.150 2 212 7.7E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 135 150 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 PANTHER PTHR11579:SF0 1 173 9.6E-35 T 23-04-2016 MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 SMART SM00650 68 199 0.001 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 SUPERFAMILY SSF53335 4 209 8.75E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 PANTHER PTHR11579 1 173 9.6E-35 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 MSIP34_RS13180 6265306f9b05c4361fb342abbefd8bd3 220 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 203 1.5E-40 T 23-04-2016 MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 SUPERFAMILY SSF52540 227 312 1.8E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 SUPERFAMILY SSF52540 8 195 1.8E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 PANTHER PTHR11603 8 340 2.1E-36 T 23-04-2016 MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 PANTHER PTHR11603:SF132 8 340 2.1E-36 T 23-04-2016 MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 SMART SM00382 43 187 6.5E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 PIRSF PIRSF002849 1 343 4.0E-78 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 179 1.0E-24 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 Gene3D G3DSA:1.10.8.300 227 337 2.7E-24 T 23-04-2016 MSIP34_RS13500 9b4ebd9b64d79b0c87efd452acd87374 344 Gene3D G3DSA:3.40.50.300 28 194 1.5E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 SMART SM00116 68 117 7.9 T 23-04-2016 IPR000644 CBS domain MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 SMART SM00116 129 177 0.21 T 23-04-2016 IPR000644 CBS domain MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 SUPERFAMILY SSF54631 55 189 2.78E-32 T 23-04-2016 MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 SMART SM01091 194 272 1.6E-25 T 23-04-2016 IPR005170 Transporter-associated domain MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 Pfam PF03471 Transporter associated domain 197 271 1.0E-18 T 23-04-2016 IPR005170 Transporter-associated domain MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 PANTHER PTHR22777:SF17 19 272 1.1E-94 T 23-04-2016 MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 Pfam PF00571 CBS domain 123 177 4.2E-7 T 23-04-2016 IPR000644 CBS domain MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 Pfam PF00571 CBS domain 73 117 5.3E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 SUPERFAMILY SSF56176 192 275 1.5E-19 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 PANTHER PTHR22777 19 272 1.1E-94 T 23-04-2016 MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 Gene3D G3DSA:3.10.580.10 47 184 1.1E-21 T 23-04-2016 MSIP34_RS10675 25f2a6cc797c0abb5621db00387052a5 279 Gene3D G3DSA:3.30.465.10 185 271 1.8E-25 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 MSIP34_RS09705 e0fcb3049ff054fe6b1cdaa9b75be845 83 PANTHER PTHR24960:SF38 1 77 3.9E-25 T 23-04-2016 MSIP34_RS09705 e0fcb3049ff054fe6b1cdaa9b75be845 83 Gene3D G3DSA:3.30.70.20 4 73 2.0E-18 T 23-04-2016 MSIP34_RS09705 e0fcb3049ff054fe6b1cdaa9b75be845 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS09705 e0fcb3049ff054fe6b1cdaa9b75be845 83 PANTHER PTHR24960 1 77 3.9E-25 T 23-04-2016 MSIP34_RS09705 e0fcb3049ff054fe6b1cdaa9b75be845 83 Pfam PF00037 4Fe-4S binding domain 6 25 1.0E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS09705 e0fcb3049ff054fe6b1cdaa9b75be845 83 SUPERFAMILY SSF54862 4 75 5.23E-19 T 23-04-2016 MSIP34_RS10610 4e6e9691879e81da44442de64b049f9d 374 Gene3D G3DSA:3.40.630.30 175 323 1.9E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS10610 4e6e9691879e81da44442de64b049f9d 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 12 372 5.2E-149 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition MSIP34_RS10610 4e6e9691879e81da44442de64b049f9d 374 PANTHER PTHR31384 62 301 8.0E-61 T 23-04-2016 MSIP34_RS10610 4e6e9691879e81da44442de64b049f9d 374 SUPERFAMILY SSF55729 174 349 9.79E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS10620 52e01af41734d9cd92bff47861e71fad 182 SUPERFAMILY SSF47473 52 142 9.14E-11 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS10620 52e01af41734d9cd92bff47861e71fad 182 Gene3D G3DSA:1.10.238.10 51 101 2.9E-4 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS10620 52e01af41734d9cd92bff47861e71fad 182 Pfam PF13202 EF hand 121 139 4.0E-6 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS10620 52e01af41734d9cd92bff47861e71fad 182 Pfam PF13202 EF hand 91 110 2.4E-4 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS10620 52e01af41734d9cd92bff47861e71fad 182 ProSitePatterns PS00018 EF-hand calcium-binding domain. 126 138 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS10620 52e01af41734d9cd92bff47861e71fad 182 Gene3D G3DSA:1.10.238.10 102 143 5.6E-8 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 PANTHER PTHR30093 18 109 1.8E-27 T 23-04-2016 MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 55 73 1.4E-8 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 19 44 1.4E-8 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 Gene3D G3DSA:3.30.700.10 20 80 1.6E-12 T 23-04-2016 MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 SUPERFAMILY SSF54523 20 144 4.81E-22 T 23-04-2016 MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 PANTHER PTHR30093:SF6 18 109 1.8E-27 T 23-04-2016 MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 18 38 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 9.6E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS05280 460d42ee8b44b1df406fb0a1e27f1e48 144 Pfam PF13633 Prokaryotic N-terminal methylation site 18 42 2.7E-9 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 SUPERFAMILY SSF82771 201 280 3.4E-15 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 Pfam PF00929 Exonuclease 6 157 5.4E-30 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 Gene3D G3DSA:3.40.1440.10 201 276 9.1E-5 T 23-04-2016 IPR027299 GIY-YIG domain MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 PANTHER PTHR30562 192 452 5.7E-66 T 23-04-2016 MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 SUPERFAMILY SSF53098 4 174 6.15E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 PANTHER PTHR30562:SF10 192 452 5.7E-66 T 23-04-2016 MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 SMART SM00479 4 169 6.4E-38 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 SMART SM00465 200 281 1.8E-13 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 Gene3D G3DSA:3.30.420.10 5 163 1.2E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 Pfam PF01541 GIY-YIG catalytic domain 202 276 4.1E-6 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS14020 2f39d3411f4ac1b3318d9fde89f02a5c 470 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 161 1.6E-24 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 Gene3D G3DSA:3.40.47.10 8 166 3.1E-35 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 SUPERFAMILY SSF53901 5 339 3.91E-46 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 250 339 9.5E-31 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 113 188 6.9E-13 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 Gene3D G3DSA:3.40.47.10 167 189 2.3E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 Gene3D G3DSA:3.40.47.10 226 340 2.3E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 PANTHER PTHR34069 5 346 2.7E-78 T 23-04-2016 MSIP34_RS13965 1462a42553dba8b3377f9f5e0d7d99d9 350 PANTHER PTHR34069:SF2 5 346 2.7E-78 T 23-04-2016 MSIP34_RS05465 71be35352d23f4477609b7492027a8f9 180 SMART SM00900 92 173 1.1E-9 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 MSIP34_RS05465 71be35352d23f4477609b7492027a8f9 180 Pfam PF04205 FMN-binding domain 94 170 8.6E-8 T 23-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 Gene3D G3DSA:3.30.300.20 198 297 3.2E-38 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 173 3.0E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 14 283 2.4E-82 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 16 36 3.5E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 84 102 3.5E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 Pfam PF01926 50S ribosome-binding GTPase 16 129 1.2E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 Hamap MF_00367 GTPase Era [era]. 11 300 34.389 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 Pfam PF07650 KH domain 213 288 4.0E-19 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 SUPERFAMILY SSF52540 15 208 6.04E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 Gene3D G3DSA:3.40.50.300 13 197 2.6E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 PANTHER PTHR11649 12 300 1.2E-105 T 23-04-2016 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 SUPERFAMILY SSF54814 186 300 1.05E-40 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 MSIP34_RS09000 0e2bf2fb87554569489a0977001837ea 300 PANTHER PTHR11649:SF3 12 300 1.2E-105 T 23-04-2016 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 541 550 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 PANTHER PTHR32071 288 637 6.8E-124 T 23-04-2016 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 SUPERFAMILY SSF52540 337 569 6.27E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 SUPERFAMILY SSF55781 67 208 2.04E-6 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 PANTHER PTHR32071:SF5 288 637 6.8E-124 T 23-04-2016 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 Gene3D G3DSA:1.10.8.60 507 574 8.4E-13 T 23-04-2016 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 618 638 2.2E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 601 618 2.2E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 Gene3D G3DSA:1.10.10.60 589 635 5.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 SMART SM00382 352 496 7.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 Pfam PF00158 Sigma-54 interaction domain 336 499 2.6E-63 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 356 369 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 Gene3D G3DSA:3.40.50.300 337 505 2.5E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 419 434 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 SUPERFAMILY SSF46689 541 636 1.57E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 Pfam PF02954 Bacterial regulatory protein, Fis family 601 634 1.4E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00080 279b4fb306a8b87645c2fdd095559d54 638 Pfam PF01590 GAF domain 83 207 6.8E-8 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 Gene3D G3DSA:3.40.190.10 83 147 2.8E-9 T 23-04-2016 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 PANTHER PTHR30537 1 301 8.9E-113 T 23-04-2016 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 Pfam PF03466 LysR substrate binding domain 89 291 1.9E-40 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 PANTHER PTHR30537:SF5 1 301 8.9E-113 T 23-04-2016 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 Gene3D G3DSA:1.10.10.10 2 82 6.9E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 SUPERFAMILY SSF53850 89 296 2.17E-43 T 23-04-2016 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 Gene3D G3DSA:3.40.190.10 161 259 2.3E-19 T 23-04-2016 MSIP34_RS13490 df1687a6cad9ca9310838f7d78bfbf46 301 SUPERFAMILY SSF46785 2 112 3.66E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 272 887 1.1E-211 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 728 750 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PANTHER PTHR11573 129 897 0.0 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 SUPERFAMILY SSF48168 132 344 3.27E-60 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 269 342 1.4E-22 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PRINTS PR01183 Ribonucleotide reductase large chain signature 597 620 5.3E-42 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PRINTS PR01183 Ribonucleotide reductase large chain signature 635 657 5.3E-42 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PRINTS PR01183 Ribonucleotide reductase large chain signature 421 440 5.3E-42 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PRINTS PR01183 Ribonucleotide reductase large chain signature 556 567 5.3E-42 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PRINTS PR01183 Ribonucleotide reductase large chain signature 739 766 5.3E-42 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 PRINTS PR01183 Ribonucleotide reductase large chain signature 663 686 5.3E-42 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 SUPERFAMILY SSF51998 819 887 1.43E-177 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 SUPERFAMILY SSF51998 345 788 1.43E-177 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Pfam PF02867 Ribonucleotide reductase, barrel domain 346 884 1.7E-179 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Gene3D G3DSA:3.20.70.20 739 784 4.5E-81 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Gene3D G3DSA:3.20.70.20 845 886 4.5E-81 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Gene3D G3DSA:3.20.70.20 266 467 4.5E-81 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Gene3D G3DSA:3.20.70.20 522 683 4.5E-81 T 23-04-2016 MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Pfam PF03477 ATP cone domain 19 115 1.4E-18 T 23-04-2016 IPR005144 ATP-cone domain MSIP34_RS05550 f605833eb55c5eeac7f4b495a855dd7d 937 Pfam PF03477 ATP cone domain 133 208 3.0E-5 T 23-04-2016 IPR005144 ATP-cone domain MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 Pfam PF00072 Response regulator receiver domain 4 113 3.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 Gene3D G3DSA:3.40.50.2300 2 125 6.5E-40 T 23-04-2016 MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 3.2E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 SUPERFAMILY SSF52172 2 175 7.26E-41 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 Gene3D G3DSA:1.10.10.10 126 226 2.3E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 SMART SM00448 2 112 1.6E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 SMART SM00862 148 224 7.4E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 PANTHER PTHR26402 2 227 3.6E-79 T 23-04-2016 MSIP34_RS06380 fb93546c705e3c838330c37b51243a70 227 PANTHER PTHR26402:SF292 2 227 3.6E-79 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PANTHER PTHR11751 546 666 9.0E-144 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PANTHER PTHR11751 517 525 9.0E-144 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PANTHER PTHR11751 148 489 9.0E-144 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PIRSF PIRSF009393 1 746 1.0E-278 T 23-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 Gene3D G3DSA:3.40.640.10 147 451 1.0E-112 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 SUPERFAMILY SSF55904 601 745 1.96E-45 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 Gene3D G3DSA:3.90.1150.10 454 622 6.7E-70 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 606 730 3.7E-46 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 387 401 - T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 147 579 1.2E-151 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 21 141 8.0E-39 T 23-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PANTHER PTHR11751:SF406 546 666 9.0E-144 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PANTHER PTHR11751:SF406 517 525 9.0E-144 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 PANTHER PTHR11751:SF406 148 489 9.0E-144 T 23-04-2016 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 Gene3D G3DSA:3.90.100.10 623 745 6.7E-32 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 MSIP34_RS04525 e09926bf48b52e51be901f251bd794e7 746 SUPERFAMILY SSF53383 147 598 4.59E-120 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS00145 a4a42d09ece55a5885dc49cbe801f5ac 140 PANTHER PTHR35335 5 104 4.7E-14 T 23-04-2016 MSIP34_RS00145 a4a42d09ece55a5885dc49cbe801f5ac 140 Pfam PF04186 FxsA cytoplasmic membrane protein 8 103 5.4E-24 T 23-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 MSIP34_RS00145 a4a42d09ece55a5885dc49cbe801f5ac 140 PANTHER PTHR35335:SF1 5 104 4.7E-14 T 23-04-2016 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 Pfam PF01595 Domain of unknown function DUF21 13 204 5.7E-47 T 23-04-2016 IPR002550 Domain of unknown function DUF21 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 PANTHER PTHR22777:SF18 1 433 4.6E-150 T 23-04-2016 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 SMART SM00116 228 276 1.2 T 23-04-2016 IPR000644 CBS domain MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 SMART SM00116 289 337 7.3 T 23-04-2016 IPR000644 CBS domain MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 SUPERFAMILY SSF56176 350 429 1.64E-16 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 PANTHER PTHR22777 1 433 4.6E-150 T 23-04-2016 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 Pfam PF00571 CBS domain 287 337 0.0059 T 23-04-2016 IPR000644 CBS domain MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 Pfam PF00571 CBS domain 219 275 1.1E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 Gene3D G3DSA:3.30.465.10 350 428 7.2E-21 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 Pfam PF03471 Transporter associated domain 353 428 3.5E-16 T 23-04-2016 IPR005170 Transporter-associated domain MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 SUPERFAMILY SSF54631 214 356 6.44E-21 T 23-04-2016 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 Gene3D G3DSA:3.10.580.10 207 346 2.8E-16 T 23-04-2016 MSIP34_RS13745 3c4846bb2c571cdfb3dcdd486c146f15 438 SMART SM01091 352 430 2.1E-20 T 23-04-2016 IPR005170 Transporter-associated domain MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 3 435 1.2E-168 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 Gene3D G3DSA:3.90.1200.10 250 306 4.7E-7 T 23-04-2016 MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 PANTHER PTHR10566 5 504 4.2E-214 T 23-04-2016 MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 Pfam PF03109 ABC1 family 108 225 2.9E-29 T 23-04-2016 IPR004147 UbiB domain MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 SUPERFAMILY SSF56112 187 426 1.73E-46 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 SUPERFAMILY SSF56112 89 152 1.73E-46 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS10095 80221dab0232a5086e5f30b27037db38 506 PANTHER PTHR10566:SF79 5 504 4.2E-214 T 23-04-2016 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 163 1.8E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 Pfam PF00593 TonB dependent receptor 442 695 1.3E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 PANTHER PTHR32552 9 697 6.1E-173 T 23-04-2016 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 Gene3D G3DSA:2.40.170.20 166 696 2.5E-92 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 PANTHER PTHR32552:SF13 9 697 6.1E-173 T 23-04-2016 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 SUPERFAMILY SSF56935 37 697 8.11E-114 T 23-04-2016 MSIP34_RS11745 abc8526c941315e47d1ff91432267108 699 Gene3D G3DSA:2.170.130.10 38 165 3.0E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 PANTHER PTHR11545 1 140 2.6E-69 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 SUPERFAMILY SSF52161 1 139 5.36E-59 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 27.154 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 PIRSF PIRSF002181 1 146 7.5E-47 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 Gene3D G3DSA:3.90.1180.10 3 141 4.3E-62 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 140 1.0E-60 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00290 4992d15018b66e8504ba0dcf09f1cde2 146 Pfam PF00572 Ribosomal protein L13 15 138 9.5E-54 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 Gene3D G3DSA:2.10.109.10 132 197 2.2E-12 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 SUPERFAMILY SSF47413 1 68 1.38E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 SMART SM00530 7 62 9.7E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 Pfam PF01381 Helix-turn-helix 8 62 5.4E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 Gene3D G3DSA:1.10.260.40 1 66 5.4E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 Pfam PF00717 Peptidase S24-like 138 194 4.9E-8 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS14650 9415df2052df251b265ff907edcee51a 226 SUPERFAMILY SSF51306 119 198 8.76E-14 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 Pfam PF02540 NAD synthase 265 512 6.0E-77 T 23-04-2016 IPR022310 NAD/GMP synthase MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 TIGRFAM TIGR00552 nadE: NAD+ synthetase 266 515 2.5E-64 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 SUPERFAMILY SSF52402 259 522 1.85E-79 T 23-04-2016 MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 Gene3D G3DSA:3.40.50.620 258 520 8.7E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 SUPERFAMILY SSF56317 1 242 1.7E-64 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 PIRSF PIRSF006630 1 540 4.4E-197 T 23-04-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|UniPathway: UPA00253 MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 Pfam PF00795 Carbon-nitrogen hydrolase 3 242 1.5E-31 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 Gene3D G3DSA:3.60.110.10 1 242 1.1E-63 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS04630 0ed23ab105d47652084ea912c1e4238f 540 PANTHER PTHR23090 1 536 5.8E-168 T 23-04-2016 MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 Pfam PF06961 Protein of unknown function (DUF1294) 115 169 1.9E-24 T 23-04-2016 IPR010718 Protein of unknown function DUF1294 MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 PANTHER PTHR12962:SF1 102 188 2.1E-27 T 23-04-2016 MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 1.5E-10 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 PANTHER PTHR12962 102 188 2.1E-27 T 23-04-2016 MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 SUPERFAMILY SSF50249 1 71 4.16E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 Gene3D G3DSA:2.40.50.140 2 70 6.9E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS13310 bad7edc8a16f5f1f1c2ada990da9ec19 201 SMART SM00357 4 68 3.5E-5 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PIRSF PIRSF038928 1 488 5.2E-199 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 Gene3D G3DSA:2.40.180.10 2 354 9.5E-166 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 SUPERFAMILY SSF56634 4 484 8.77E-191 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 ProSitePatterns PS00438 Catalase proximal active site signature. 43 59 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PANTHER PTHR11465 1 487 1.5E-251 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 Pfam PF00199 Catalase 7 369 4.7E-172 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 SMART SM01060 7 396 1.9E-241 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PRINTS PR00067 Catalase signature 123 141 4.7E-64 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PRINTS PR00067 Catalase signature 20 43 4.7E-64 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PRINTS PR00067 Catalase signature 317 343 4.7E-64 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PRINTS PR00067 Catalase signature 104 121 4.7E-64 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PRINTS PR00067 Catalase signature 83 101 4.7E-64 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 PRINTS PR00067 Catalase signature 285 312 4.7E-64 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS02695 f0446a4027dd0a82e5aaa2d72d80bc46 488 Pfam PF06628 Catalase-related immune-responsive 423 483 1.1E-21 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 Gene3D G3DSA:3.30.450.20 199 334 2.9E-26 T 23-04-2016 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 Pfam PF00989 PAS fold 200 309 2.9E-12 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 PANTHER PTHR24423:SF383 201 416 1.4E-24 T 23-04-2016 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SMART SM00086 401 443 9.2 T 23-04-2016 IPR001610 PAC motif MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SMART SM00086 270 312 7.4 T 23-04-2016 IPR001610 PAC motif MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SMART SM00086 145 186 25.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SUPERFAMILY SSF55785 202 315 5.83E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 199 319 3.7E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SUPERFAMILY SSF55785 309 440 1.94E-17 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 Gene3D G3DSA:3.30.450.20 92 170 4.9E-9 T 23-04-2016 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 Pfam PF13426 PAS domain 92 174 7.6E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 Pfam PF08447 PAS fold 350 436 1.4E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 Gene3D G3DSA:3.30.450.20 335 442 6.9E-20 T 23-04-2016 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 PANTHER PTHR24423 201 416 1.4E-24 T 23-04-2016 MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SUPERFAMILY SSF55785 92 170 1.17E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SMART SM00091 73 140 13.0 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SMART SM00091 197 263 9.0E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12395 592c5afdcb692ce2711b85e45d0a6930 466 SMART SM00091 324 395 1.6E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 SMART SM00421 146 203 7.2E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 SUPERFAMILY SSF52172 5 133 3.13E-31 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 Gene3D G3DSA:3.40.50.2300 5 153 3.8E-36 T 23-04-2016 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 Gene3D G3DSA:1.10.10.10 154 210 3.1E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-6 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 SUPERFAMILY SSF46894 143 209 1.8E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 Pfam PF00072 Response regulator receiver domain 7 117 7.8E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 SMART SM00448 5 117 2.0E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.4E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 PANTHER PTHR26402:SF210 5 205 5.8E-59 T 23-04-2016 MSIP34_RS03745 9b45a61523115f5ed1e168f830d63745 211 PANTHER PTHR26402 5 205 5.8E-59 T 23-04-2016 MSIP34_RS05625 fae24613f4050bd30917fbb950856eb9 89 Pfam PF06305 Protein of unknown function (DUF1049) 22 84 3.6E-16 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 5.4E-201 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 PANTHER PTHR20852:SF15 161 469 2.1E-259 T 23-04-2016 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 PANTHER PTHR20852:SF15 1 138 2.1E-259 T 23-04-2016 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 SUPERFAMILY SSF54368 4 100 1.01E-36 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 SMART SM01230 102 379 2.0E-148 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 Gene3D G3DSA:3.10.20.70 4 105 2.4E-40 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 Gene3D G3DSA:3.30.590.10 106 455 1.5E-137 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 PANTHER PTHR20852 161 469 2.1E-259 T 23-04-2016 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 PANTHER PTHR20852 1 138 2.1E-259 T 23-04-2016 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 1.1E-29 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 SUPERFAMILY SSF55931 102 468 1.28E-137 T 23-04-2016 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 8.2E-138 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12535 8ebe87ea83cf4fef595f1d580677d480 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS01980 b09575d250d3624f534503bd8b307b02 246 SUPERFAMILY SSF53218 3 199 9.03E-31 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS01980 b09575d250d3624f534503bd8b307b02 246 SMART SM00852 5 165 8.2E-26 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS01980 b09575d250d3624f534503bd8b307b02 246 Pfam PF00994 Probable molybdopterin binding domain 7 158 6.0E-26 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS01980 b09575d250d3624f534503bd8b307b02 246 PANTHER PTHR13939 4 232 8.9E-29 T 23-04-2016 MSIP34_RS01980 b09575d250d3624f534503bd8b307b02 246 Gene3D G3DSA:3.40.980.10 2 166 3.5E-27 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 592 695 2.8E-31 T 23-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 SUPERFAMILY SSF69279 237 392 7.65E-31 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 SUPERFAMILY SSF69279 439 458 7.65E-31 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 PANTHER PTHR32305:SF9 111 606 2.2E-129 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 PANTHER PTHR32305:SF9 972 978 2.2E-129 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 PANTHER PTHR32305:SF9 43 92 2.2E-129 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 Gene3D G3DSA:3.55.50.10 138 228 8.9E-34 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 Pfam PF05954 Phage late control gene D protein (GPD) 47 389 2.1E-103 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 36 616 5.2E-124 T 23-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 SUPERFAMILY SSF69349 547 617 1.73E-9 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 41 615 2.2E-108 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 PANTHER PTHR32305 111 606 2.2E-129 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 PANTHER PTHR32305 972 978 2.2E-129 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 PANTHER PTHR32305 43 92 2.2E-129 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 SUPERFAMILY SSF69255 465 557 2.88E-31 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 Gene3D G3DSA:2.40.50.230 471 557 2.8E-34 T 23-04-2016 IPR006531 Gp5 N-terminal MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 SUPERFAMILY SSF69279 35 224 2.42E-50 T 23-04-2016 MSIP34_RS10580 6bdcb38b69c0cb35dc44ccb587714ad3 980 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 736 879 2.7E-41 T 23-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 PIRSF PIRSF000382 1 764 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 432 754 5.8E-154 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 SUPERFAMILY SSF51726 4 395 1.57E-102 T 23-04-2016 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 PANTHER PTHR30519:SF0 1 764 0.0 T 23-04-2016 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 316 1.8E-116 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 759 36.366 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 PANTHER PTHR30519 1 764 0.0 T 23-04-2016 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 SUPERFAMILY SSF51726 397 758 2.62E-115 T 23-04-2016 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 Gene3D G3DSA:3.20.20.210 393 759 7.5E-129 T 23-04-2016 MSIP34_RS05540 0b81985d346207c3bac5bf56cb8eb989 766 Gene3D G3DSA:3.20.20.210 3 390 7.8E-141 T 23-04-2016 MSIP34_RS05440 52006eb119504163e54721a488300f5a 149 Gene3D G3DSA:3.30.450.20 41 145 3.0E-6 T 23-04-2016 MSIP34_RS05440 52006eb119504163e54721a488300f5a 149 Pfam PF08670 MEKHLA domain 3 147 9.3E-50 T 23-04-2016 IPR013978 MEKHLA MSIP34_RS05440 52006eb119504163e54721a488300f5a 149 SUPERFAMILY SSF55785 38 129 3.62E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SUPERFAMILY SSF48452 37 171 2.53E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 Gene3D G3DSA:1.25.40.10 81 286 9.0E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 Gene3D G3DSA:1.25.40.10 28 80 3.7E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 PANTHER PTHR23083 38 285 4.5E-17 T 23-04-2016 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 Pfam PF13181 Tetratricopeptide repeat 175 203 3.8E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SUPERFAMILY SSF48452 139 288 1.1E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 Pfam PF13176 Tetratricopeptide repeat 98 132 0.002 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 Pfam PF13176 Tetratricopeptide repeat 218 249 0.0033 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SMART SM00028 213 246 0.16 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SMART SM00028 173 206 36.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SMART SM00028 253 286 280.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SMART SM00028 96 129 0.069 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06735 78144277b169664c4335a2255b5a920b 305 SMART SM00028 59 92 19.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 PANTHER PTHR21535 65 358 2.9E-66 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 Gene3D G3DSA:3.30.460.20 5 166 1.0E-46 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 Gene3D G3DSA:1.20.58.340 279 356 1.6E-27 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 SUPERFAMILY SSF144083 292 353 3.53E-18 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 SUPERFAMILY SSF143865 13 290 8.37E-82 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 Pfam PF01544 CorA-like Mg2+ transporter protein 65 351 1.5E-72 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 PANTHER PTHR21535:SF33 65 358 2.9E-66 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 Gene3D G3DSA:1.20.58.340 167 277 3.3E-37 T 23-04-2016 MSIP34_RS03305 9103b74fe6a50ff4d432c303f240270d 359 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 54 356 1.3E-89 T 23-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 PANTHER PTHR21367:SF0 5 247 9.6E-53 T 23-04-2016 MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 20 90 3.1E-21 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 PANTHER PTHR21367 5 247 9.6E-53 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 SUPERFAMILY SSF55729 84 245 3.53E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 PIRSF PIRSF037208 4 246 1.3E-84 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 110 236 1.5E-37 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MSIP34_RS05660 ea2861296de74600fce098557ee004eb 247 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 245 40.443 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MSIP34_RS13145 0b3ae7e262b73a251c27261acdf5f66d 226 Gene3D G3DSA:1.20.910.10 1 201 2.4E-15 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS13145 0b3ae7e262b73a251c27261acdf5f66d 226 Pfam PF14518 Iron-containing redox enzyme 39 206 7.9E-26 T 23-04-2016 IPR028201 PqqC-like protein MSIP34_RS13145 0b3ae7e262b73a251c27261acdf5f66d 226 SUPERFAMILY SSF48613 1 214 1.21E-57 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS10990 e5de38f1fbc4f581aedde534bc3ef0e3 292 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 267 285 0.0022 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS10990 e5de38f1fbc4f581aedde534bc3ef0e3 292 TIGRFAM TIGR02913 HAF_rpt: probable extracellular repeat, HAF family 152 187 4.1E-11 T 23-04-2016 IPR014262 Extracellular HAF MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 SUPERFAMILY SSF52172 5 187 3.77E-37 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 SMART SM00862 152 228 3.8E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 Gene3D G3DSA:3.40.50.2300 3 125 1.1E-35 T 23-04-2016 MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 SMART SM00448 5 115 9.2E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 PANTHER PTHR26402 5 228 1.3E-87 T 23-04-2016 MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 Pfam PF00072 Response regulator receiver domain 7 116 3.1E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 Gene3D G3DSA:1.10.10.10 129 229 2.6E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 2.2E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS05395 4fc2bbf4360eda408e0aa23dc4853131 233 PANTHER PTHR26402:SF516 5 228 1.3E-87 T 23-04-2016 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 312 1.5E-94 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 SUPERFAMILY SSF53671 11 315 8.51E-96 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PANTHER PTHR11405 13 314 8.6E-126 T 23-04-2016 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 Gene3D G3DSA:3.40.50.1370 157 292 2.7E-50 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 1.7E-37 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PANTHER PTHR11405:SF16 13 314 8.6E-126 T 23-04-2016 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 2.6E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 2.6E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 2.6E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 301 2.6E-18 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 40.911 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 165 311 1.2E-26 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 1.3E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 294 308 1.3E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 1.3E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 275 1.3E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 229 238 1.3E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 1.3E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS03180 4866bb376e628188ba1c09b590a8932c 317 Gene3D G3DSA:3.40.50.1370 13 156 1.8E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Gene3D G3DSA:3.40.50.300 574 804 6.5E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 SMART SM00533 291 598 4.6E-100 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 16 851 25.009 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 SUPERFAMILY SSF52540 574 804 1.11E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Pfam PF05192 MutS domain III 278 566 1.4E-38 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Pfam PF05188 MutS domain II 137 260 2.6E-21 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Pfam PF05190 MutS family domain IV 435 525 1.1E-28 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 694 710 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 PIRSF PIRSF037677 3 829 1.5E-151 T 23-04-2016 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 SMART SM00534 613 800 1.5E-116 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Pfam PF00488 MutS domain V 617 803 1.8E-85 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Pfam PF01624 MutS domain I 17 128 7.8E-42 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 PANTHER PTHR11361:SF86 8 839 0.0 T 23-04-2016 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 SUPERFAMILY SSF48334 275 573 2.09E-89 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Gene3D G3DSA:3.30.420.110 135 263 2.9E-37 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 SUPERFAMILY SSF53150 123 273 4.05E-39 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Gene3D G3DSA:3.40.1170.10 10 129 8.9E-51 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 PANTHER PTHR11361 8 839 0.0 T 23-04-2016 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 16 856 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 SUPERFAMILY SSF55271 10 124 9.81E-43 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 MSIP34_RS09190 4acf49e72edb7be9aa22a7fcd9e26982 859 Gene3D G3DSA:1.10.1420.10 271 475 2.5E-52 T 23-04-2016 MSIP34_RS01840 be52a076e6457afb3afebd9781928291 423 Pfam PF08376 Nitrate and nitrite sensing 37 278 2.5E-44 T 23-04-2016 IPR013587 Nitrate/nitrite sensing protein MSIP34_RS01840 be52a076e6457afb3afebd9781928291 423 SMART SM01012 361 416 3.5E-21 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 MSIP34_RS01840 be52a076e6457afb3afebd9781928291 423 SUPERFAMILY SSF52172 337 416 3.53E-16 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS01840 be52a076e6457afb3afebd9781928291 423 Pfam PF03861 ANTAR domain 365 416 1.2E-18 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 MSIP34_RS01840 be52a076e6457afb3afebd9781928291 423 Gene3D G3DSA:1.10.10.10 365 418 4.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03805 eb18a77223cd94b2a36786fe63bf9fd5 176 Gene3D G3DSA:3.30.530.20 24 174 1.5E-36 T 23-04-2016 IPR023393 START-like domain MSIP34_RS03805 eb18a77223cd94b2a36786fe63bf9fd5 176 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 25 173 5.6E-30 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase MSIP34_RS03805 eb18a77223cd94b2a36786fe63bf9fd5 176 SUPERFAMILY SSF55961 23 173 1.51E-27 T 23-04-2016 MSIP34_RS03805 eb18a77223cd94b2a36786fe63bf9fd5 176 PANTHER PTHR39332:SF2 15 176 1.3E-26 T 23-04-2016 MSIP34_RS03805 eb18a77223cd94b2a36786fe63bf9fd5 176 PANTHER PTHR39332 15 176 1.3E-26 T 23-04-2016 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 PANTHER PTHR11938 1 82 2.7E-41 T 23-04-2016 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.2E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.2E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.2E-14 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 Pfam PF00037 4Fe-4S binding domain 35 56 2.2E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 PANTHER PTHR11938:SF101 1 82 2.7E-41 T 23-04-2016 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 SUPERFAMILY SSF54862 1 93 3.94E-23 T 23-04-2016 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 Gene3D G3DSA:3.30.70.20 3 80 1.3E-19 T 23-04-2016 MSIP34_RS07750 e57348654f8a7e1e19a610e70cfe150f 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 105 2.0E-16 T 23-04-2016 IPR022569 Ferredoxin, C-terminal MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 SMART SM00220 265 516 2.8E-13 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 SMART SM00332 2 230 1.9E-11 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 Gene3D G3DSA:3.30.200.20 250 375 7.4E-13 T 23-04-2016 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 SUPERFAMILY SSF81606 4 231 9.68E-51 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 Pfam PF00069 Protein kinase domain 276 466 8.2E-28 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 SMART SM00331 17 232 9.7E-17 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 SUPERFAMILY SSF56112 261 545 1.12E-47 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 PANTHER PTHR24348 308 563 5.8E-55 T 23-04-2016 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 Pfam PF13672 Protein phosphatase 2C 32 190 6.7E-14 T 23-04-2016 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 Gene3D G3DSA:3.60.40.10 3 232 8.5E-50 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 PANTHER PTHR24348:SF23 308 563 5.8E-55 T 23-04-2016 MSIP34_RS01795 6f50e3ad9d430bf97fb446faa5dff721 564 Gene3D G3DSA:1.10.510.10 376 518 7.5E-26 T 23-04-2016 MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 Pfam PF08021 Siderophore-interacting FAD-binding domain 67 117 1.2E-13 T 23-04-2016 IPR013113 FAD-binding 9, siderophore-interacting MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 SUPERFAMILY SSF63380 12 120 3.59E-13 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 PANTHER PTHR30157 5 243 5.6E-64 T 23-04-2016 MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 PANTHER PTHR30157:SF1 5 243 5.6E-64 T 23-04-2016 MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 Gene3D G3DSA:3.40.50.80 120 237 2.9E-33 T 23-04-2016 MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 Gene3D G3DSA:2.40.30.10 14 116 4.8E-29 T 23-04-2016 MSIP34_RS13370 cb6cb97804e7a2608b2547fa58979917 243 Pfam PF04954 Siderophore-interacting protein 125 235 1.5E-27 T 23-04-2016 IPR007037 Siderophore-interacting protein MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 25 424 2.0E-76 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 Gene3D G3DSA:3.10.450.50 486 590 1.4E-5 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 Gene3D G3DSA:1.20.1600.10 25 422 3.2E-50 T 23-04-2016 MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 SUPERFAMILY SSF54427 486 590 9.4E-13 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 PANTHER PTHR30026 1 448 7.0E-63 T 23-04-2016 MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 Pfam PF02321 Outer membrane efflux protein 28 214 8.5E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 Pfam PF02321 Outer membrane efflux protein 236 415 1.2E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 PANTHER PTHR30026:SF4 1 448 7.0E-63 T 23-04-2016 MSIP34_RS05180 4a22f0fee25f1ac675b16c096a829639 593 SUPERFAMILY SSF56954 27 433 1.29E-71 T 23-04-2016 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 19 393 1.1E-158 T 23-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 110 118 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 Pfam PF00483 Nucleotidyl transferase 20 288 6.7E-70 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 15 419 52.07 T 23-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 PANTHER PTHR22572:SF10 19 393 9.9E-174 T 23-04-2016 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 PANTHER PTHR22572 19 393 9.9E-174 T 23-04-2016 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 208 218 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 Gene3D G3DSA:3.90.550.10 19 297 2.0E-81 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 Gene3D G3DSA:3.90.550.10 340 383 2.0E-81 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 24 43 - T 23-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 SUPERFAMILY SSF53448 14 290 1.23E-82 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 SUPERFAMILY SSF53448 357 373 1.23E-82 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06480 0c7ea21e681b32689cd536bc679a2e0c 426 SUPERFAMILY SSF51161 308 413 8.99E-16 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 PANTHER PTHR21343 8 490 4.1E-218 T 23-04-2016 MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 Gene3D G3DSA:3.40.50.300 5 239 9.9E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 SUPERFAMILY SSF52317 254 446 4.73E-39 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 236 1.8E-29 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 436 7.0E-52 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 PANTHER PTHR21343:SF1 8 490 4.1E-218 T 23-04-2016 MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 Gene3D G3DSA:3.40.50.880 262 446 4.3E-25 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 490 202.604 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 SUPERFAMILY SSF52540 5 240 9.79E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00760 b7c685fdd46dc50713ef2aab7ffd2fc7 490 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 483 1.4E-145 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 7 260 2.3E-101 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 Gene3D G3DSA:2.160.10.10 4 193 1.1E-49 T 23-04-2016 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 PIRSF PIRSF000456 3 261 1.0E-99 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 SUPERFAMILY SSF51161 4 261 5.5E-80 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 PANTHER PTHR23416 1 253 3.6E-119 T 23-04-2016 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 Gene3D G3DSA:1.20.1180.10 196 261 5.1E-25 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 4 261 44.496 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 PANTHER PTHR23416:SF8 1 253 3.6E-119 T 23-04-2016 MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 23 51 1.3E-6 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 141 2.3E-9 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS07110 6e6e4bf8cad540d0e06746748a3c1add 261 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 179 260 1.5E-28 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 1 339 47.118 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 330 8.1E-37 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 1 328 1.7E-139 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 SUPERFAMILY SSF55326 2 164 4.49E-52 T 23-04-2016 MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 Gene3D G3DSA:3.30.1330.10 16 164 6.9E-63 T 23-04-2016 IPR016188 PurM-like, N-terminal domain MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 Gene3D G3DSA:3.90.650.10 166 334 9.1E-70 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 SUPERFAMILY SSF56042 165 331 3.14E-60 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 56 157 1.4E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain MSIP34_RS01160 454ff010a55b8de2c5589042f71adb1b 339 PANTHER PTHR10520 1 326 1.1E-213 T 23-04-2016 MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 Gene3D G3DSA:3.40.50.300 21 184 7.0E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 PANTHER PTHR11603 10 300 5.2E-151 T 23-04-2016 MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 38 168 1.4E-60 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 Gene3D G3DSA:1.10.8.300 200 290 5.7E-26 T 23-04-2016 MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 SUPERFAMILY SSF52540 11 282 1.06E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 PIRSF PIRSF002849 1 304 4.0E-115 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted MSIP34_RS04965 f66c73011a03d2cab8f9badac9bdd468 306 PANTHER PTHR11603:SF155 10 300 5.2E-151 T 23-04-2016 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 238 1.6E-42 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 Gene3D G3DSA:3.40.710.10 253 616 1.5E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 PANTHER PTHR30627 5 620 8.1E-233 T 23-04-2016 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 SUPERFAMILY SSF56601 254 620 5.45E-103 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 PANTHER PTHR30627:SF2 5 620 8.1E-233 T 23-04-2016 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 610 1.4E-75 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 SUPERFAMILY SSF56519 56 253 3.14E-49 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 Gene3D G3DSA:3.90.1310.10 130 252 2.2E-37 T 23-04-2016 MSIP34_RS12755 1ea2566cca983269d0044a66f3a24560 643 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 613 2.8E-237 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 MSIP34_RS05175 2433d314cb69c209a4d8ca77f090e1a4 213 SUPERFAMILY SSF54001 51 114 1.96E-6 T 23-04-2016 MSIP34_RS05175 2433d314cb69c209a4d8ca77f090e1a4 213 PANTHER PTHR39327:SF1 25 213 3.3E-62 T 23-04-2016 MSIP34_RS05175 2433d314cb69c209a4d8ca77f090e1a4 213 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 52 163 2.3E-14 T 23-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted MSIP34_RS05175 2433d314cb69c209a4d8ca77f090e1a4 213 PANTHER PTHR39327 25 213 3.3E-62 T 23-04-2016 MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 PANTHER PTHR12039 6 220 7.6E-59 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 SUPERFAMILY SSF52374 6 219 5.0E-55 T 23-04-2016 MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 70 1.3E-9 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 Pfam PF01467 Cytidylyltransferase-like 9 190 7.7E-30 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 5 217 31.208 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 Gene3D G3DSA:3.40.50.620 7 218 9.9E-70 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS02900 2c4746a2cca4f84f3c942c98f857033a 220 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 9 216 2.3E-54 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Gene3D G3DSA:3.40.50.10490 445 609 2.8E-65 T 23-04-2016 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Pfam PF01380 SIS domain 290 417 4.5E-27 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Pfam PF01380 SIS domain 462 591 8.1E-27 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 SUPERFAMILY SSF56235 2 234 6.86E-72 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.3E-257 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Gene3D G3DSA:3.40.50.10490 243 444 2.3E-60 T 23-04-2016 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Gene3D G3DSA:3.60.20.10 2 237 5.8E-77 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 PANTHER PTHR10937:SF0 1 609 0.0 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 SUPERFAMILY SSF53697 244 609 1.39E-107 T 23-04-2016 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 PANTHER PTHR10937 1 609 0.0 T 23-04-2016 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.518 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 MSIP34_RS14095 4fe3ae1a79dad00eba1f13e5661c8f8c 609 Pfam PF13522 Glutamine amidotransferase domain 63 183 5.6E-19 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82693 138 184 9.94E-28 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82693 277 333 9.94E-28 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82866 299 499 9.16E-53 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PANTHER PTHR32063:SF11 1 1042 0.0 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Pfam PF00873 AcrB/AcrD/AcrF family 3 1037 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Gene3D G3DSA:3.30.70.1430 579 681 6.0E-31 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82714 732 818 2.09E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Gene3D G3DSA:1.10.3850.10 825 1037 7.8E-57 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Gene3D G3DSA:1.20.1640.10 296 507 5.2E-63 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82693 575 681 3.4E-28 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Gene3D G3DSA:3.30.2090.10 184 277 7.4E-27 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Gene3D G3DSA:3.30.2090.10 732 818 1.6E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 4 1042 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PANTHER PTHR32063 1 1042 0.0 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82693 41 134 1.44E-26 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82693 682 731 1.52E-28 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82693 818 867 1.52E-28 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 Gene3D G3DSA:3.30.70.1430 41 141 6.0E-32 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82866 841 1036 2.88E-44 T 23-04-2016 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.4E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS12480 189c54a08ada408560b7df618185436b 1069 SUPERFAMILY SSF82714 185 274 1.09E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82693 46 125 1.52E-17 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82714 183 263 1.26E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 1.9E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.9E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.9E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.9E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.9E-22 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Gene3D G3DSA:1.10.3850.10 276 501 2.1E-54 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Gene3D G3DSA:1.10.3850.10 812 1022 7.7E-55 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PANTHER PTHR32063 2 1027 0.0 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1022 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82866 290 499 7.32E-38 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82693 267 324 1.74E-16 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82693 140 181 1.74E-16 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82693 560 654 1.46E-9 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Gene3D G3DSA:3.30.2090.10 717 802 1.2E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Gene3D G3DSA:3.30.2090.10 182 263 1.1E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Gene3D G3DSA:3.30.70.1430 562 652 3.5E-6 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82714 718 802 1.57E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 PANTHER PTHR32063:SF24 2 1027 0.0 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 SUPERFAMILY SSF82866 801 1023 3.4E-53 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Gene3D G3DSA:3.30.70.1430 47 140 1.7E-20 T 23-04-2016 MSIP34_RS06030 cc53867b2693954d5e44dbb2ee1be8c2 1035 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 1.9E-276 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS04905 cb41454a430e8045437c9aec5f325df9 174 PANTHER PTHR23091 2 172 5.7E-48 T 23-04-2016 MSIP34_RS04905 cb41454a430e8045437c9aec5f325df9 174 PANTHER PTHR23091:SF184 2 172 5.7E-48 T 23-04-2016 MSIP34_RS04905 cb41454a430e8045437c9aec5f325df9 174 SUPERFAMILY SSF55729 4 154 3.31E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS04905 cb41454a430e8045437c9aec5f325df9 174 Pfam PF13673 Acetyltransferase (GNAT) domain 48 149 9.5E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS04905 cb41454a430e8045437c9aec5f325df9 174 Gene3D G3DSA:3.40.630.30 3 156 4.5E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS10240 b6d5eb6258cf5f7f20c8e03a6ceedf9f 326 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 68 316 3.2E-16 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MSIP34_RS10240 b6d5eb6258cf5f7f20c8e03a6ceedf9f 326 Gene3D G3DSA:3.20.20.300 38 322 1.5E-26 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MSIP34_RS10240 b6d5eb6258cf5f7f20c8e03a6ceedf9f 326 SUPERFAMILY SSF51445 64 321 2.53E-22 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS13890 3ccffc155327e83f7336a595d25ac35b 233 Pfam PF10014 2OG-Fe dioxygenase 37 229 4.8E-70 T 23-04-2016 IPR018724 2OG-Fe dioxygenase MSIP34_RS09905 3b849103042beea11d000855c3d0eb78 208 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 15 208 38.131 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS09905 3b849103042beea11d000855c3d0eb78 208 PANTHER PTHR21327 16 208 3.4E-95 T 23-04-2016 MSIP34_RS09905 3b849103042beea11d000855c3d0eb78 208 Pfam PF00925 GTP cyclohydrolase II 18 177 1.5E-65 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS09905 3b849103042beea11d000855c3d0eb78 208 SUPERFAMILY SSF142695 16 177 1.96E-60 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS09905 3b849103042beea11d000855c3d0eb78 208 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 19 208 3.7E-67 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 SUPERFAMILY SSF53901 2 316 5.62E-77 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 317 74.447 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 317 1.0E-139 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 5.0E-38 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 PANTHER PTHR18919:SF109 27 317 9.3E-142 T 23-04-2016 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 6.4E-34 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 Gene3D G3DSA:3.40.47.10 162 316 7.2E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 Gene3D G3DSA:3.40.47.10 2 161 3.8E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07060 fa39f2f116b107da15a2bb7709f45d0d 317 PANTHER PTHR18919 27 317 9.3E-142 T 23-04-2016 MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 Gene3D G3DSA:3.20.19.10 1 202 1.5E-50 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 SUPERFAMILY SSF52016 1 203 4.12E-64 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 PANTHER PTHR11670 1 208 1.1E-107 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 6.8E-89 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.959 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 PANTHER PTHR11670:SF27 1 208 1.1E-107 T 23-04-2016 MSIP34_RS07895 8c08b21568b8617bf7667c73dd471103 212 Pfam PF00694 Aconitase C-terminal domain 1 131 1.6E-37 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 PANTHER PTHR19288 1 257 1.2E-82 T 23-04-2016 MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 SUPERFAMILY SSF56784 7 254 3.68E-53 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 Pfam PF13242 HAD-hyrolase-like 180 252 4.4E-15 T 23-04-2016 MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 91 2.1E-18 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 Gene3D G3DSA:3.40.50.1000 5 80 2.3E-37 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 Gene3D G3DSA:3.40.50.1000 178 257 2.3E-37 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 Gene3D G3DSA:3.40.50.10410 81 177 2.5E-33 T 23-04-2016 IPR023215 Nitrophenylphosphatase-like domain MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 TIGRFAM TIGR01458 HAD-SF-IIA-hyp3: HAD hydrolase, TIGR01458 family 7 252 7.9E-59 T 23-04-2016 IPR006355 HAD-superfamily hydrolase, subfamily IIA, hypothetical 2 MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 10 229 1.1E-38 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA MSIP34_RS11165 cc4230a60cb694a56c11932a7c6319ef 259 PANTHER PTHR19288:SF43 1 257 1.2E-82 T 23-04-2016 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 PANTHER PTHR10992 135 266 1.6E-69 T 23-04-2016 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 PANTHER PTHR10992 3 117 1.6E-69 T 23-04-2016 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 PANTHER PTHR10992:SF812 135 266 1.6E-69 T 23-04-2016 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 PANTHER PTHR10992:SF812 3 117 1.6E-69 T 23-04-2016 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 Pfam PF00561 alpha/beta hydrolase fold 13 253 2.2E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 SUPERFAMILY SSF53474 2 265 3.17E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 265 41.762 T 23-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 Gene3D G3DSA:3.40.50.1820 3 265 2.8E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS02880 7dc79dae1d4b4f6d5f8a25d3a1723a63 277 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 11 263 4.7E-80 T 23-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 MSIP34_RS02590 20a642ca57bd21646ae1747af1b89ddd 202 Pfam PF01121 Dephospho-CoA kinase 1 181 8.9E-58 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 MSIP34_RS02590 20a642ca57bd21646ae1747af1b89ddd 202 PANTHER PTHR10695 2 199 3.3E-64 T 23-04-2016 MSIP34_RS02590 20a642ca57bd21646ae1747af1b89ddd 202 Gene3D G3DSA:3.40.50.300 1 194 6.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02590 20a642ca57bd21646ae1747af1b89ddd 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 193 24.466 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 MSIP34_RS02590 20a642ca57bd21646ae1747af1b89ddd 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 2 187 2.5E-49 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 MSIP34_RS02590 20a642ca57bd21646ae1747af1b89ddd 202 SUPERFAMILY SSF52540 1 196 6.31E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06760 d35782d57888f7572839cb5a421320ca 110 PANTHER PTHR36116:SF1 1 109 5.7E-46 T 23-04-2016 MSIP34_RS06760 d35782d57888f7572839cb5a421320ca 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 108 25.024 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 MSIP34_RS06760 d35782d57888f7572839cb5a421320ca 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 4 109 9.9E-40 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 MSIP34_RS06760 d35782d57888f7572839cb5a421320ca 110 SUPERFAMILY SSF103481 10 107 1.12E-6 T 23-04-2016 MSIP34_RS06760 d35782d57888f7572839cb5a421320ca 110 PANTHER PTHR36116 1 109 5.7E-46 T 23-04-2016 MSIP34_RS02750 014f8f083ff8ba112f5f3bca6bd4af07 424 TIGRFAM TIGR00277 HDIG: HDIG domain 172 261 3.4E-12 T 23-04-2016 IPR006675 HDIG domain MSIP34_RS02750 014f8f083ff8ba112f5f3bca6bd4af07 424 Pfam PF11871 Domain of unknown function (DUF3391) 9 129 5.8E-20 T 23-04-2016 IPR021812 Protein of unknown function DUF3391 MSIP34_RS02750 014f8f083ff8ba112f5f3bca6bd4af07 424 Pfam PF01966 HD domain 172 292 3.9E-17 T 23-04-2016 IPR006674 HD domain MSIP34_RS02750 014f8f083ff8ba112f5f3bca6bd4af07 424 SUPERFAMILY SSF109604 169 332 1.72E-26 T 23-04-2016 MSIP34_RS02750 014f8f083ff8ba112f5f3bca6bd4af07 424 SMART SM00471 167 302 7.3E-7 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS02750 014f8f083ff8ba112f5f3bca6bd4af07 424 Gene3D G3DSA:1.10.3210.10 168 293 2.7E-21 T 23-04-2016 IPR006674 HD domain MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 Pfam PF02289 Cyclohydrolase (MCH) 13 323 6.7E-133 T 23-04-2016 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 Gene3D G3DSA:3.10.340.11 106 178 6.9E-43 T 23-04-2016 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 Gene3D G3DSA:3.10.340.11 12 54 6.9E-43 T 23-04-2016 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 SUPERFAMILY SSF56199 12 325 2.48E-128 T 23-04-2016 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 Hamap MF_00486 Methenyltetrahydromethanopterin cyclohydrolase [mch]. 1 327 143.365 T 23-04-2016 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 Gene3D G3DSA:3.30.1030.10 179 324 5.0E-86 T 23-04-2016 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 Gene3D G3DSA:3.30.1030.10 55 105 5.0E-86 T 23-04-2016 MSIP34_RS07650 505dae9b444c360973e940cdc77a09c5 327 TIGRFAM TIGR03120 one_C_mch: methenyltetrahydromethanopterin cyclohydrolase 13 324 1.4E-123 T 23-04-2016 IPR003209 Methenyltetrahydromethanopterin cyclohydrolase GO:0006730|GO:0018759 KEGG: 00680+3.5.4.27|MetaCyc: PWY-1723 MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 1.3E-16 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 1.3E-16 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 1.3E-16 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 1.3E-16 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 Pfam PF00482 Type II secretion system (T2SS), protein F 265 386 4.1E-24 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 Pfam PF00482 Type II secretion system (T2SS), protein F 62 185 3.0E-28 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 PANTHER PTHR30012 18 395 7.6E-90 T 23-04-2016 MSIP34_RS05240 8dfd1603fd61075cbfcdda1705982a06 395 PANTHER PTHR30012:SF0 18 395 7.6E-90 T 23-04-2016 MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 PANTHER PTHR30001 1 485 3.4E-191 T 23-04-2016 MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 SUPERFAMILY SSF50249 39 122 3.13E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 Pfam PF10150 Ribonuclease E/G family 118 389 1.5E-97 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 Gene3D G3DSA:2.40.50.140 30 122 6.6E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 SMART SM00316 37 116 3.6E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 Pfam PF00575 S1 RNA binding domain 38 113 7.8E-5 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS03140 a060a18c009496c2bbabfe9ab5f23def 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 1.9E-154 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PANTHER PTHR24093 10 728 2.5E-259 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00943 Copper-transporting ATPase signature 53 73 1.1E-10 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00943 Copper-transporting ATPase signature 205 223 1.1E-10 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00943 Copper-transporting ATPase signature 338 352 1.1E-10 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00943 Copper-transporting ATPase signature 139 158 1.1E-10 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00943 Copper-transporting ATPase signature 398 413 1.1E-10 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00943 Copper-transporting ATPase signature 598 615 1.1E-10 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF55008 8 78 2.62E-19 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Gene3D G3DSA:3.40.1110.10 434 548 9.9E-14 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 136 724 9.9E-173 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 417 423 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PANTHER PTHR24093:SF332 10 728 2.5E-259 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 ProSitePatterns PS01047 Heavy-metal-associated domain. 15 44 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF81665 670 698 4.18E-15 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF81665 316 408 4.18E-15 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF81665 181 219 4.18E-15 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Gene3D G3DSA:3.30.70.100 8 77 5.3E-24 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 188 703 2.4E-81 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 640 1.9E-21 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 568 578 1.9E-21 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 656 1.9E-21 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 415 429 1.9E-21 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 265 279 1.9E-21 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Pfam PF00403 Heavy-metal-associated domain 13 71 4.1E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Gene3D G3DSA:2.70.150.10 154 316 4.2E-28 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Pfam PF00702 haloacid dehalogenase-like hydrolase 411 635 4.9E-40 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Gene3D G3DSA:3.40.50.1000 549 689 3.3E-51 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Gene3D G3DSA:3.40.50.1000 386 431 3.3E-51 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 Pfam PF00122 E1-E2 ATPase 187 406 7.1E-68 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF81653 218 315 1.09E-25 T 23-04-2016 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 154 723 9.1E-181 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF56784 475 721 1.39E-52 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06890 d98b6e830daf405352ff886241f625b4 734 SUPERFAMILY SSF56784 414 433 1.39E-52 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 Pfam PF02545 Maf-like protein 5 190 2.3E-56 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 189 2.9E-51 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 PIRSF PIRSF006305 1 196 2.1E-50 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 SUPERFAMILY SSF52972 1 190 1.96E-61 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 PANTHER PTHR11746 128 188 3.4E-13 T 23-04-2016 MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 Gene3D G3DSA:3.90.950.10 3 194 1.4E-69 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like MSIP34_RS03135 3e08c3ee4e8f363290b4bb5491df7aa8 196 Hamap MF_00528 Septum formation protein Maf [maf]. 5 195 33.103 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 Pfam PF03466 LysR substrate binding domain 91 292 4.7E-24 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 Gene3D G3DSA:3.40.190.10 95 175 3.1E-4 T 23-04-2016 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 Gene3D G3DSA:3.40.190.10 176 256 7.7E-8 T 23-04-2016 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.1E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 PANTHER PTHR30126 4 308 1.6E-119 T 23-04-2016 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 Gene3D G3DSA:1.10.10.10 4 89 4.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 PANTHER PTHR30126:SF4 4 308 1.6E-119 T 23-04-2016 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 SUPERFAMILY SSF53850 91 292 8.22E-27 T 23-04-2016 MSIP34_RS13435 e4a890f3ca5209ab33ee4f4c30c8c058 314 SUPERFAMILY SSF46785 5 89 3.21E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06050 efceed8d9eb6f2c3f663e602f4783689 173 Pfam PF01713 Smr domain 91 172 4.2E-25 T 23-04-2016 IPR002625 Smr domain MSIP34_RS06050 efceed8d9eb6f2c3f663e602f4783689 173 PANTHER PTHR35562 2 172 2.6E-39 T 23-04-2016 MSIP34_RS06050 efceed8d9eb6f2c3f663e602f4783689 173 PANTHER PTHR35562:SF2 2 172 2.6E-39 T 23-04-2016 MSIP34_RS06050 efceed8d9eb6f2c3f663e602f4783689 173 SMART SM00463 88 172 2.0E-16 T 23-04-2016 IPR002625 Smr domain MSIP34_RS06050 efceed8d9eb6f2c3f663e602f4783689 173 SUPERFAMILY SSF160443 90 172 1.44E-19 T 23-04-2016 IPR002625 Smr domain MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 Pfam PF13672 Protein phosphatase 2C 1 191 1.9E-13 T 23-04-2016 MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 PANTHER PTHR13832:SF278 1 226 1.0E-35 T 23-04-2016 MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 PANTHER PTHR13832 1 226 1.0E-35 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 Gene3D G3DSA:3.60.40.10 1 225 2.5E-51 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 SMART SM00332 1 224 1.2E-7 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 SMART SM00331 1 226 6.2E-15 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS14460 c726a94f9eb1d8327255119cd806d24d 236 SUPERFAMILY SSF81606 1 226 2.22E-50 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS12400 77f72a98d155d0e1b55f60b6c4948560 266 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 31 266 8.7E-61 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 MSIP34_RS12400 77f72a98d155d0e1b55f60b6c4948560 266 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 8 266 2.5E-45 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 MSIP34_RS01945 f22e19ac8c64f6a0e6793a772467ead9 181 Gene3D G3DSA:3.90.870.10 5 181 3.6E-48 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain MSIP34_RS01945 f22e19ac8c64f6a0e6793a772467ead9 181 SUPERFAMILY SSF55821 6 179 2.69E-45 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain MSIP34_RS01945 f22e19ac8c64f6a0e6793a772467ead9 181 PANTHER PTHR17490 11 177 5.4E-65 T 23-04-2016 MSIP34_RS01945 f22e19ac8c64f6a0e6793a772467ead9 181 Pfam PF01300 Telomere recombination 10 180 1.4E-35 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 MSIP34_RS01945 f22e19ac8c64f6a0e6793a772467ead9 181 PANTHER PTHR17490:SF8 11 177 5.4E-65 T 23-04-2016 MSIP34_RS01945 f22e19ac8c64f6a0e6793a772467ead9 181 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 180 35.371 T 23-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 PIRSF PIRSF000124 1 388 2.5E-134 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 SMART SM00984 300 387 2.7E-14 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 Gene3D G3DSA:3.40.50.720 1 197 3.4E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 SUPERFAMILY SSF48179 192 287 5.44E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 PANTHER PTHR11374 1 368 5.6E-229 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.7E-8 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-26 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 SUPERFAMILY SSF51735 1 194 4.6E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 SUPERFAMILY SSF52413 283 387 2.09E-27 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 PIRSF PIRSF500134 1 342 7.8E-118 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 PANTHER PTHR11374:SF17 1 368 5.6E-229 T 23-04-2016 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 Gene3D G3DSA:1.10.1040.10 198 284 3.0E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 6.7E-32 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 Gene3D G3DSA:3.40.50.720 285 388 6.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09165 e3d767e2d014b8bfbdb8e231f62dfebc 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 380 3.6E-102 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 PANTHER PTHR10000:SF10 1 216 9.5E-52 T 23-04-2016 MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 193 2.1E-37 T 23-04-2016 MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 206 4.2E-45 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 Gene3D G3DSA:3.40.50.1000 83 221 2.8E-50 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 Gene3D G3DSA:1.20.1440.100 17 82 2.0E-28 T 23-04-2016 MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 PANTHER PTHR10000 1 216 9.5E-52 T 23-04-2016 MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 195 2.1E-23 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 MSIP34_RS11200 515f851dc71cd8f873c8bd83b6c6c8ba 222 SUPERFAMILY SSF56784 4 212 5.47E-33 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 1.6E-39 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 352 370 1.6E-39 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 310 328 1.6E-39 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 464 486 1.6E-39 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 437 453 1.6E-39 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Gene3D G3DSA:3.50.50.60 212 335 1.2E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Gene3D G3DSA:3.50.50.60 336 432 1.3E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 SUPERFAMILY SSF52833 103 196 6.09E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 500 2.1E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PIRSF PIRSF000238 1 514 1.0E-255 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 340 360 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 400 416 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 311 319 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 348 372 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 439 460 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 333 345 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 474 492 4.1E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PANTHER PTHR22912:SF107 198 510 5.7E-196 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Gene3D G3DSA:3.40.30.10 1 93 9.1E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 SUPERFAMILY SSF51905 204 510 3.18E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Gene3D G3DSA:3.40.30.10 102 196 5.1E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Pfam PF13192 Thioredoxin domain 120 194 5.2E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 SUPERFAMILY SSF52833 1 101 9.95E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 PANTHER PTHR22912 198 510 5.7E-196 T 23-04-2016 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 514 2.7E-238 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 MSIP34_RS01140 7a4a353328b79e0964194b0d007744c9 514 Gene3D G3DSA:3.50.50.60 433 512 1.7E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 PANTHER PTHR23133:SF7 2 175 2.1E-71 T 23-04-2016 MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 SUPERFAMILY SSF56784 1 175 1.58E-44 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 PIRSF PIRSF004682 1 179 4.3E-53 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 146 5.9E-35 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 143 1.0E-43 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 Gene3D G3DSA:3.40.50.1000 1 173 3.0E-55 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 Pfam PF13242 HAD-hyrolase-like 99 171 6.4E-11 T 23-04-2016 MSIP34_RS10705 688fb5f42280b264a858d488ff0341c3 180 PANTHER PTHR23133 2 175 2.1E-71 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SUPERFAMILY SSF56091 4 317 2.7E-117 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Gene3D G3DSA:1.10.287.610 5 69 2.9E-29 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 PANTHER PTHR23389:SF9 9 538 8.0E-193 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 412 439 7.7E-12 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Hamap MF_01588 DNA ligase [ligA]. 4 672 53.427 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Gene3D G3DSA:3.40.50.10190 598 676 1.9E-26 T 23-04-2016 IPR001357 BRCT domain MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 672 2.8E-13 T 23-04-2016 IPR001357 BRCT domain MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Gene3D G3DSA:3.30.470.30 120 253 3.9E-48 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SUPERFAMILY SSF52113 599 675 2.33E-20 T 23-04-2016 IPR001357 BRCT domain MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Pfam PF14520 Helix-hairpin-helix domain 451 505 6.2E-8 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Gene3D G3DSA:1.10.150.20 509 589 1.1E-33 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Gene3D G3DSA:2.40.50.140 320 392 1.8E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 PIRSF PIRSF001604 3 677 1.1E-243 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 667 1.1E-256 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Gene3D G3DSA:1.10.150.20 440 508 1.3E-24 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SUPERFAMILY SSF50249 319 401 1.71E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Pfam PF12826 Helix-hairpin-helix motif 515 578 8.8E-26 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SMART SM00532 5 453 2.7E-266 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SMART SM00278 549 568 1.4 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SMART SM00278 451 470 110.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SMART SM00278 517 536 310.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SMART SM00278 485 504 230.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 319 1.4E-129 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SMART SM00292 598 675 8.6E-17 T 23-04-2016 IPR001357 BRCT domain MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 2.3E-35 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 PANTHER PTHR23389 9 538 8.0E-193 T 23-04-2016 MSIP34_RS06725 f419b5ed5aba4ca9cc2bdcdea2027439 681 SUPERFAMILY SSF47781 411 589 1.59E-61 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS10995 ab405415a2f59356e96193c656aa2b96 164 PIRSF PIRSF006162 5 162 6.1E-44 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 MSIP34_RS10995 ab405415a2f59356e96193c656aa2b96 164 SUPERFAMILY SSF101307 9 152 1.57E-38 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 MSIP34_RS10995 ab405415a2f59356e96193c656aa2b96 164 Pfam PF04608 Phosphatidylglycerophosphatase A 15 152 1.5E-47 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 MSIP34_RS10995 ab405415a2f59356e96193c656aa2b96 164 PANTHER PTHR36305 1 161 1.2E-48 T 23-04-2016 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 Gene3D G3DSA:3.40.50.150 211 419 3.1E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 PANTHER PTHR22807 111 424 8.9E-87 T 23-04-2016 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 Gene3D G3DSA:3.30.70.1170 148 209 1.5E-9 T 23-04-2016 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 220 417 6.7E-53 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 SUPERFAMILY SSF53335 108 419 2.94E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 201 215 4.9E-28 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 299 311 4.9E-28 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 349 365 4.9E-28 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 402 419 4.9E-28 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS01175 f5ece15cc7224f6d1a69f9eb0142948f 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 230 240 4.9E-28 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 Gene3D G3DSA:1.20.1250.20 22 203 1.1E-29 T 23-04-2016 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 Gene3D G3DSA:1.20.1250.20 251 449 3.2E-22 T 23-04-2016 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PANTHER PTHR23500 13 459 5.2E-194 T 23-04-2016 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 Pfam PF00083 Sugar (and other) transporter 23 451 5.7E-130 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 13 448 1.8E-131 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 SUPERFAMILY SSF103473 10 449 8.63E-76 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PANTHER PTHR23500:SF119 13 459 5.2E-194 T 23-04-2016 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 324 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PRINTS PR00171 Sugar transporter signature 376 388 1.0E-23 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PRINTS PR00171 Sugar transporter signature 263 273 1.0E-23 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PRINTS PR00171 Sugar transporter signature 353 374 1.0E-23 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PRINTS PR00171 Sugar transporter signature 27 37 1.0E-23 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 MSIP34_RS10940 7b5be71da765afc8112e3e3f4547fb58 463 PRINTS PR00171 Sugar transporter signature 110 129 1.0E-23 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 Gene3D G3DSA:3.30.930.10 17 315 1.3E-65 T 23-04-2016 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 PIRSF PIRSF001549 6 360 7.1E-47 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 366 33.104 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 319 9.3E-89 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 PANTHER PTHR11476 10 356 6.2E-59 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 SUPERFAMILY SSF55681 4 319 4.27E-62 T 23-04-2016 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 PANTHER PTHR11476:SF5 10 356 6.2E-59 T 23-04-2016 MSIP34_RS08550 1128f0d2b3dfacbbc889b4ca0bbf68cd 386 Pfam PF13393 Histidyl-tRNA synthetase 10 315 2.0E-121 T 23-04-2016 MSIP34_RS03760 f633f4ff0ef73ab306ef475091782b2c 288 Gene3D G3DSA:3.40.190.10 37 117 2.3E-7 T 23-04-2016 MSIP34_RS03760 f633f4ff0ef73ab306ef475091782b2c 288 Gene3D G3DSA:3.40.190.10 243 275 2.3E-7 T 23-04-2016 MSIP34_RS03760 f633f4ff0ef73ab306ef475091782b2c 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 270 6.2E-13 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS03760 f633f4ff0ef73ab306ef475091782b2c 288 TIGRFAM TIGR03870 ABC_MoxJ: methanol oxidation system protein MoxJ 38 283 3.6E-95 T 23-04-2016 IPR022455 Methanol oxidation system protein MoxJ GO:0042597|GO:0046170 MSIP34_RS03760 f633f4ff0ef73ab306ef475091782b2c 288 SMART SM00062 37 278 7.7E-30 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS03760 f633f4ff0ef73ab306ef475091782b2c 288 SUPERFAMILY SSF53850 33 277 8.54E-22 T 23-04-2016 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 19 127 2.0E-41 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 15 136 26.585 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 SUPERFAMILY SSF57716 97 135 3.28E-10 T 23-04-2016 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 PANTHER PTHR33823:SF2 17 134 8.7E-37 T 23-04-2016 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 100 124 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 SUPERFAMILY SSF109635 5 96 2.22E-27 T 23-04-2016 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 95 130 1.4E-14 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 MSIP34_RS04540 1fa571a4cb29efd44aae62f19c925883 137 PANTHER PTHR33823 17 134 8.7E-37 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 Gene3D G3DSA:3.40.50.880 2 186 3.0E-70 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PANTHER PTHR11922:SF7 1 186 5.4E-100 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 SUPERFAMILY SSF52317 1 187 3.33E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 1.3E-85 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.4E-6 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.4E-6 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00097 Anthranilate synthase component II signature 74 85 9.5E-38 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00097 Anthranilate synthase component II signature 99 107 9.5E-38 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00097 Anthranilate synthase component II signature 164 177 9.5E-38 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00097 Anthranilate synthase component II signature 119 131 9.5E-38 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00097 Anthranilate synthase component II signature 47 56 9.5E-38 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00097 Anthranilate synthase component II signature 2 16 9.5E-38 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.7E-14 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 8.7E-14 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.7E-14 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 PANTHER PTHR11922 1 186 5.4E-100 T 23-04-2016 MSIP34_RS12640 e33c170c3ab8fb45b8ee46a32377bb0c 188 Pfam PF00117 Glutamine amidotransferase class-I 4 186 3.7E-58 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 Pfam PF01168 Alanine racemase, N-terminal domain 8 216 2.5E-67 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 Gene3D G3DSA:2.40.37.10 209 354 6.8E-53 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PANTHER PTHR30511:SF4 1 354 9.1E-135 T 23-04-2016 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 SUPERFAMILY SSF50621 224 353 2.13E-43 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PANTHER PTHR30511 1 354 9.1E-135 T 23-04-2016 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 Gene3D G3DSA:3.20.20.10 10 208 1.7E-67 T 23-04-2016 IPR029066 PLP-binding barrel MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 SUPERFAMILY SSF51419 8 231 1.6E-64 T 23-04-2016 IPR029066 PLP-binding barrel MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 Hamap MF_01201 Alanine racemase. 1 354 34.247 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 60 78 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 263 278 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 246 261 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 284 301 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 189 216 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 26 42 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 336 349 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 154 165 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 PRINTS PR00992 Alanine racemase signature 120 132 7.9E-69 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 Pfam PF00842 Alanine racemase, C-terminal domain 230 350 3.2E-36 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 TIGRFAM TIGR00492 alr: alanine racemase 2 354 2.4E-110 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS07260 76cf25e174c953433ccc33162b4f4508 356 SMART SM01005 230 354 1.0E-61 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS10585 aa5df26baf8d0ba6d22c6167a4ddc0ad 132 Pfam PF07681 DoxX 9 90 9.8E-20 T 23-04-2016 IPR032808 DoxX family MSIP34_RS10585 aa5df26baf8d0ba6d22c6167a4ddc0ad 132 PANTHER PTHR33452:SF6 10 125 4.4E-37 T 23-04-2016 MSIP34_RS10585 aa5df26baf8d0ba6d22c6167a4ddc0ad 132 PANTHER PTHR33452 10 125 4.4E-37 T 23-04-2016 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 Pfam PF00717 Peptidase S24-like 64 146 3.6E-20 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 1.3E-24 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 1.3E-24 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 197 216 1.3E-24 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 Gene3D G3DSA:2.10.109.10 54 131 1.1E-56 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 Gene3D G3DSA:2.10.109.10 197 244 1.1E-56 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 238 5.9E-55 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 Gene3D G3DSA:2.170.230.10 132 190 6.3E-7 T 23-04-2016 IPR019766 Peptidase S26A, all-beta subdomain MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 Pfam PF10502 Signal peptidase, peptidase S26 189 234 1.5E-5 T 23-04-2016 IPR019533 Peptidase S26 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 SUPERFAMILY SSF51306 56 243 8.89E-72 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 PANTHER PTHR12383:SF27 2 243 1.9E-91 T 23-04-2016 MSIP34_RS09015 2f74cdc741590372d6cd3bd8219fc230 248 PANTHER PTHR12383 2 243 1.9E-91 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 Gene3D G3DSA:3.40.190.10 92 192 2.4E-26 T 23-04-2016 MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 PANTHER PTHR30537:SF11 1 298 3.5E-152 T 23-04-2016 MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 PANTHER PTHR30537 1 298 3.5E-152 T 23-04-2016 MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 Pfam PF03466 LysR substrate binding domain 90 293 2.1E-39 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 SUPERFAMILY SSF46785 4 85 2.73E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 SUPERFAMILY SSF53850 90 296 6.67E-44 T 23-04-2016 MSIP34_RS13690 482f01b5c1ba19cd69d024d3fc7259e9 300 Gene3D G3DSA:1.10.10.10 3 85 6.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 472 595 3.27E-16 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 355 477 1.83E-19 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 593 682 6.54E-8 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 306 363 1.31E-8 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 856 981 2.35E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.120.10.30 1143 1457 4.4E-29 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 1504 1648 3.14E-5 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 PRINTS PR00313 NodO calcium binding signature 419 427 4.4E-10 T 23-04-2016 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 PRINTS PR00313 NodO calcium binding signature 234 242 4.4E-10 T 23-04-2016 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 PRINTS PR00313 NodO calcium binding signature 446 455 4.4E-10 T 23-04-2016 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 PRINTS PR00313 NodO calcium binding signature 222 233 4.4E-10 T 23-04-2016 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 306 482 4.9E-27 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 1089 1131 3.1E-12 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 854 973 6.0E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 196 283 6.0E-15 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 1639 1761 3.9E-15 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 990 1056 3.1E-12 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 600 821 1.1E-28 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 490 575 9.5E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Gene3D G3DSA:2.150.10.10 1591 1638 3.1E-12 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 739 757 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 424 442 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 212 230 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 914 932 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 230 248 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1112 1130 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 525 543 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 534 552 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1013 1031 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 923 941 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 415 433 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 730 748 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 239 257 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 221 239 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF07676 WD40-like Beta Propeller Repeat 1386 1401 0.17 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF07676 WD40-like Beta Propeller Repeat 1438 1474 0.0063 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 537 553 0.063 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1673 1688 0.041 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 225 241 3.2E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 209 223 0.016 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1610 1627 0.063 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 725 741 0.0055 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 501 518 20.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 437 452 0.27 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 742 759 0.24 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 619 634 0.077 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1592 1608 1.8 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 605 617 54.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 998 1015 0.29 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 323 339 0.16 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 520 536 0.0093 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1646 1661 2.3 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 909 925 2.1E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1117 1131 0.16 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 401 417 11.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 927 942 0.12 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1097 1114 1.3 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 419 435 0.0095 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 1631 1791 9.42E-18 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 993 1165 7.48E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 663 843 1.05E-25 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF82171 1163 1538 2.09E-24 T 23-04-2016 MSIP34_RS14620 c0b8c00c61cd85176d26688858b518e1 1800 SUPERFAMILY SSF51120 206 298 2.88E-16 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82714 722 806 6.54E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82714 183 265 1.06E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1028 1.9E-228 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82693 138 182 7.85E-16 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82693 268 311 7.85E-16 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:3.30.2090.10 183 265 3.5E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:3.30.2090.10 721 806 1.9E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PANTHER PTHR32063:SF4 2 1033 6.7E-302 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 1.1E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.1E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.1E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 1.1E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.1E-29 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 PANTHER PTHR32063 2 1033 6.7E-302 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:1.20.1640.10 301 506 5.4E-43 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82866 290 497 4.84E-33 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82693 42 128 5.75E-20 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:3.30.70.1430 42 137 1.7E-23 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:1.10.3850.10 814 1032 1.7E-42 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:3.30.70.1320 138 179 5.3E-12 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 Gene3D G3DSA:3.30.70.1320 270 300 5.3E-12 T 23-04-2016 MSIP34_RS07575 dc754e1c28ad8e27224b876eed3f54eb 1039 SUPERFAMILY SSF82866 807 1034 1.14E-37 T 23-04-2016 MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 PANTHER PTHR22602 36 332 1.3E-49 T 23-04-2016 MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 SUPERFAMILY SSF103025 22 262 6.12E-67 T 23-04-2016 MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 PANTHER PTHR22602:SF0 36 332 1.3E-49 T 23-04-2016 MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 208 268 3.6E-27 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 Gene3D G3DSA:3.30.70.1400 46 130 2.0E-27 T 23-04-2016 MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 Pfam PF01571 Aminomethyltransferase folate-binding domain 21 218 7.8E-19 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal MSIP34_RS04405 20f3a2b6e5e0ab08d0a2ec5a28bd0d72 344 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 246 299 8.4E-5 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 PANTHER PTHR13903 10 291 4.6E-132 T 23-04-2016 IPR012093 Pirin MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 SUPERFAMILY SSF51182 18 292 1.31E-87 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 Pfam PF02678 Pirin 35 135 2.2E-37 T 23-04-2016 IPR003829 Pirin, N-terminal domain MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 Gene3D G3DSA:2.60.120.10 16 266 2.8E-88 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 PIRSF PIRSF006232 16 293 1.6E-102 T 23-04-2016 IPR012093 Pirin MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 Pfam PF05726 Pirin C-terminal cupin domain 190 292 1.4E-31 T 23-04-2016 IPR008778 Pirin, C-terminal domain MSIP34_RS10590 9f7dd1b6ff74d4a411a70f7de820dd0b 293 PANTHER PTHR13903:SF8 10 291 4.6E-132 T 23-04-2016 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Pfam PF08279 HTH domain 9 58 2.7E-12 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 322 28.15 T 23-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Gene3D G3DSA:2.30.30.100 276 323 6.0E-14 T 23-04-2016 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 211 1.0E-14 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 85 322 1.4E-53 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 PANTHER PTHR12835 9 322 2.1E-67 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 SUPERFAMILY SSF46785 2 60 2.5E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 SUPERFAMILY SSF50037 276 322 9.61E-7 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Pfam PF02237 Biotin protein ligase C terminal domain 278 322 2.0E-5 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Gene3D G3DSA:1.10.10.10 8 62 2.7E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 Gene3D G3DSA:3.30.930.10 75 272 3.1E-56 T 23-04-2016 MSIP34_RS03330 06c1a4d5d93319221ab967101f44563c 326 SUPERFAMILY SSF55681 76 272 2.49E-52 T 23-04-2016 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 PANTHER PTHR30371 4 242 5.6E-100 T 23-04-2016 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 238 18.666 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 219 5.7E-67 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 6 33 4.6E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 101 4.6E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 127 4.6E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 152 180 4.6E-47 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 PANTHER PTHR30371:SF0 4 242 5.6E-100 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 ProSitePatterns PS01218 TatC family signature. 152 171 - T 23-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site MSIP34_RS01445 5b4335470d68d289bb4810d7990c3eca 242 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 224 1.2E-72 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 Pfam PF01202 Shikimate kinase 11 163 3.4E-52 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 PRINTS PR01100 Shikimate kinase family signature 75 84 8.1E-24 T 23-04-2016 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 PRINTS PR01100 Shikimate kinase family signature 5 20 8.1E-24 T 23-04-2016 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 PRINTS PR01100 Shikimate kinase family signature 96 113 8.1E-24 T 23-04-2016 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 PRINTS PR01100 Shikimate kinase family signature 57 65 8.1E-24 T 23-04-2016 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 PRINTS PR01100 Shikimate kinase family signature 29 42 8.1E-24 T 23-04-2016 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 SUPERFAMILY SSF52540 4 167 7.55E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 Hamap MF_00109 Shikimate kinase [aroK]. 2 168 29.797 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 PANTHER PTHR21087 4 167 1.5E-62 T 23-04-2016 MSIP34_RS12580 08bae8df5b023e77164edccdc149c9d4 168 Gene3D G3DSA:3.40.50.300 4 167 7.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13540 59ebb3ba21807791ea9fb95b5de6c4e4 484 PANTHER PTHR33908 1 481 5.1E-137 T 23-04-2016 MSIP34_RS13540 59ebb3ba21807791ea9fb95b5de6c4e4 484 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 14 247 1.9E-15 T 23-04-2016 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 MSIP34_RS13540 59ebb3ba21807791ea9fb95b5de6c4e4 484 PANTHER PTHR33908:SF4 1 481 5.1E-137 T 23-04-2016 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 SUPERFAMILY SSF48019 211 336 3.57E-28 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 8.3E-84 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 217 329 4.0E-12 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 SUPERFAMILY SSF52540 1 209 8.5E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 PANTHER PTHR34388 1 342 2.5E-65 T 23-04-2016 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 Gene3D G3DSA:1.20.272.20 223 334 3.9E-34 T 23-04-2016 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 Pfam PF06144 DNA polymerase III, delta subunit 20 188 4.6E-25 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 Gene3D G3DSA:1.10.8.60 143 222 1.9E-32 T 23-04-2016 MSIP34_RS02910 ff4f2bbc8c96d4127d29858636165971 342 Gene3D G3DSA:3.40.50.300 1 137 6.6E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 8.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 8.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 8.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 8.0E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 SUPERFAMILY SSF52540 1 299 2.31E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Pfam PF01926 50S ribosome-binding GTPase 3 126 1.2E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 SUPERFAMILY SSF81271 277 358 1.61E-37 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PIRSF PIRSF006641 1 361 4.1E-155 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Gene3D G3DSA:1.10.150.300 129 198 3.1E-27 T 23-04-2016 IPR023192 TGS-like domain MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Gene3D G3DSA:3.40.50.300 199 264 5.1E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Gene3D G3DSA:3.40.50.300 2 128 5.1E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PANTHER PTHR23305 1 361 1.4E-202 T 23-04-2016 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Pfam PF06071 Protein of unknown function (DUF933) 277 360 2.2E-41 T 23-04-2016 IPR013029 Domain of unknown function DUF933 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Gene3D G3DSA:3.10.20.30 265 361 3.4E-51 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 361 44.074 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 361 2.0E-154 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 MSIP34_RS10170 790673d0f00c1a8c7ed3fe13cbce44ff 361 PANTHER PTHR23305:SF12 1 361 1.4E-202 T 23-04-2016 MSIP34_RS05480 79a1843a28eb94a8e3273ea06de80f95 309 Pfam PF03631 Virulence factor BrkB 32 295 1.5E-47 T 23-04-2016 IPR017039 Virulence factor BrkB MSIP34_RS05480 79a1843a28eb94a8e3273ea06de80f95 309 PANTHER PTHR30213:SF1 18 308 3.9E-57 T 23-04-2016 MSIP34_RS05480 79a1843a28eb94a8e3273ea06de80f95 309 PANTHER PTHR30213 18 308 3.9E-57 T 23-04-2016 MSIP34_RS05480 79a1843a28eb94a8e3273ea06de80f95 309 PIRSF PIRSF035875 12 309 4.7E-58 T 23-04-2016 IPR017039 Virulence factor BrkB MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 SMART SM00488 168 403 0.0095 T 23-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Pfam PF06733 DEAD_2 265 384 1.5E-13 T 23-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 SMART SM00491 598 733 2.0E-13 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 PANTHER PTHR11472 172 744 3.7E-64 T 23-04-2016 MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Gene3D G3DSA:3.40.50.300 578 671 2.7E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Gene3D G3DSA:3.40.50.300 703 737 2.7E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Pfam PF13307 Helicase C-terminal domain 584 744 7.8E-34 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 SUPERFAMILY SSF52540 556 728 1.69E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 SUPERFAMILY SSF52540 197 249 1.69E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 SUPERFAMILY SSF52540 313 386 1.69E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 SUPERFAMILY SSF52540 513 527 1.69E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Gene3D G3DSA:3.40.50.300 515 537 6.7E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Gene3D G3DSA:3.40.50.300 328 391 6.7E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02080 61f4c5eb7ea517ed0bb04fd7bc239c02 747 Gene3D G3DSA:3.40.50.300 166 279 6.7E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 129 144 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 Gene3D G3DSA:3.40.50.300 42 215 1.7E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 PANTHER PTHR32071 43 380 6.8E-149 T 23-04-2016 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 Gene3D G3DSA:1.10.10.60 342 380 4.3E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 Gene3D G3DSA:1.10.8.60 216 287 1.4E-24 T 23-04-2016 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 Pfam PF02954 Bacterial regulatory protein, Fis family 353 378 4.3E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 SMART SM00382 63 206 6.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 SUPERFAMILY SSF52540 44 284 1.21E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 256 265 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 SUPERFAMILY SSF46689 328 380 1.79E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 SUPERFAMILY SSF46689 256 299 1.79E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00530 02e477d3193d480b55578f74bb426905 382 Pfam PF00158 Sigma-54 interaction domain 44 209 2.2E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 ProSitePatterns PS01312 SecA family signature. 495 510 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PANTHER PTHR30612 552 912 0.0 T 23-04-2016 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PANTHER PTHR30612 8 515 0.0 T 23-04-2016 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 819 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SUPERFAMILY SSF81886 622 842 1.22E-84 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SUPERFAMILY SSF81886 888 900 1.22E-84 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SMART SM00957 6 397 0.0 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SMART SM00958 228 353 1.0E-76 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 834 19.995 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SUPERFAMILY SSF52540 412 620 1.33E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Pfam PF07517 SecA DEAD-like domain 7 397 2.5E-134 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Gene3D G3DSA:3.90.1440.10 230 363 1.8E-44 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SUPERFAMILY SSF52540 363 410 3.61E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SUPERFAMILY SSF52540 5 228 3.61E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 SUPERFAMILY SSF81767 227 363 2.35E-42 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Pfam PF02810 SEC-C motif 892 910 1.6E-10 T 23-04-2016 IPR004027 SEC-C motif MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Gene3D G3DSA:1.10.3060.10 650 832 5.4E-59 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Pfam PF07516 SecA Wing and Scaffold domain 619 830 7.4E-69 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Pfam PF01043 SecA preprotein cross-linking domain 233 353 7.3E-37 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Gene3D G3DSA:3.40.50.300 3 228 1.3E-127 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Gene3D G3DSA:3.40.50.300 364 411 1.3E-127 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 170 190 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 334 356 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 101 115 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 63 87 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 371 388 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 117 127 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 PRINTS PR00906 SecA protein signature 408 421 7.6E-71 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 MSIP34_RS02535 13fb05bbfd4bdf95b74e4d0527408505 912 Gene3D G3DSA:3.40.50.300 413 621 3.8E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07630 539b48aeebabeba1b9053ae6cb02df6c 209 SUPERFAMILY SSF51366 4 206 1.19E-38 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS07630 539b48aeebabeba1b9053ae6cb02df6c 209 PANTHER PTHR35039 5 204 1.2E-52 T 23-04-2016 MSIP34_RS07630 539b48aeebabeba1b9053ae6cb02df6c 209 SMART SM00934 3 204 1.4E-32 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS07630 539b48aeebabeba1b9053ae6cb02df6c 209 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 5 206 2.6E-76 T 23-04-2016 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|UniPathway: UPA00294 MSIP34_RS07630 539b48aeebabeba1b9053ae6cb02df6c 209 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 203 2.2E-26 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS07630 539b48aeebabeba1b9053ae6cb02df6c 209 Gene3D G3DSA:3.20.20.70 4 205 4.0E-62 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS04120 9fa0a168bd7a95941c126bcb37f3776f 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 2.9E-9 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS04120 9fa0a168bd7a95941c126bcb37f3776f 286 PANTHER PTHR30433:SF4 1 285 1.8E-160 T 23-04-2016 IPR022522 Flagellar motor stator, MotA MSIP34_RS04120 9fa0a168bd7a95941c126bcb37f3776f 286 PANTHER PTHR30433 1 285 1.8E-160 T 23-04-2016 MSIP34_RS04120 9fa0a168bd7a95941c126bcb37f3776f 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 282 1.1E-121 T 23-04-2016 IPR022522 Flagellar motor stator, MotA MSIP34_RS04120 9fa0a168bd7a95941c126bcb37f3776f 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 247 1.7E-54 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 368 8.7E-39 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 SMART SM00825 Beta-ketoacyl synthase 7 411 5.7E-20 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 PIRSF PIRSF000447 2 411 1.0E-137 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 Gene3D G3DSA:3.40.47.10 3 261 7.2E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 SUPERFAMILY SSF53901 138 409 1.06E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 SUPERFAMILY SSF53901 2 106 1.06E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 PANTHER PTHR11712 5 410 8.1E-164 T 23-04-2016 MSIP34_RS06115 d67d46d1e4c6c89cc545bd44d13f2432 411 Gene3D G3DSA:3.40.47.10 266 410 7.3E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 PANTHER PTHR11203:SF11 122 451 3.1E-116 T 23-04-2016 MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 PANTHER PTHR11203:SF11 1 105 3.1E-116 T 23-04-2016 MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 Pfam PF00753 Metallo-beta-lactamase superfamily 16 195 5.4E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 SUPERFAMILY SSF56281 1 451 2.63E-134 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 PANTHER PTHR11203 122 451 3.1E-116 T 23-04-2016 MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 PANTHER PTHR11203 1 105 3.1E-116 T 23-04-2016 MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 SMART SM00849 13 242 1.3E-14 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 Gene3D G3DSA:3.60.15.10 1 100 6.8E-57 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 Gene3D G3DSA:3.60.15.10 135 258 6.8E-57 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 SMART SM01027 247 366 1.0E-51 T 23-04-2016 IPR022712 Beta-Casp domain MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 379 443 1.0E-15 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain MSIP34_RS06555 2dcc62fbc6b4a2ce31d89c57d48c0647 451 Pfam PF10996 Beta-Casp domain 247 365 2.4E-26 T 23-04-2016 IPR022712 Beta-Casp domain MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 PANTHER PTHR30448:SF0 1 278 1.2E-120 T 23-04-2016 MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 SUPERFAMILY SSF52540 3 153 1.24E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 Gene3D G3DSA:3.40.50.300 1 151 7.7E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 278 38.482 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 PIRSF PIRSF005052 1 278 7.6E-109 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 PANTHER PTHR30448 1 278 1.2E-120 T 23-04-2016 MSIP34_RS01050 45d88328a53a1fb3d5e3bb356fe79b65 278 Pfam PF03668 P-loop ATPase protein family 1 278 3.1E-95 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 PANTHER PTHR11749:SF7 3 232 3.5E-114 T 23-04-2016 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 SUPERFAMILY SSF51366 5 211 6.73E-69 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 Gene3D G3DSA:3.20.20.70 1 211 4.7E-87 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 210 1.8E-91 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 PIRSF PIRSF001461 1 232 2.0E-98 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 PANTHER PTHR11749 3 232 3.5E-114 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MSIP34_RS12655 227269dd8560d80be2a014f3d2c8e48c 232 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 207 2.3E-88 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 MSIP34_RS12445 5707533a5499bba859aa21b555362b77 122 Gene3D G3DSA:2.40.128.20 29 106 3.8E-6 T 23-04-2016 IPR012674 Calycin MSIP34_RS12445 5707533a5499bba859aa21b555362b77 122 Pfam PF10703 Molybdenum cofactor biosynthesis protein F 29 105 4.2E-11 T 23-04-2016 IPR024724 Molybdenum cofactor biosynthesis protein F MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 155 1.4E-62 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 61 4.8E-25 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 PANTHER PTHR10938 1 157 8.3E-61 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 Gene3D G3DSA:3.10.20.80 1 62 5.2E-27 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 152 3.4E-37 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 SUPERFAMILY SSF55200 69 154 3.27E-33 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 SUPERFAMILY SSF54364 1 62 3.14E-23 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 Gene3D G3DSA:3.30.110.10 64 156 3.5E-40 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 MSIP34_RS03675 5c78df122f519f874a205516435c86ba 157 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 25.865 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SUPERFAMILY SSF55785 130 245 1.74E-16 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Pfam PF00563 EAL domain 436 670 1.1E-72 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SMART SM00086 87 128 7.5 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SMART SM00086 205 247 12.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 PANTHER PTHR10799:SF774 618 637 1.1E-87 T 23-04-2016 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 PANTHER PTHR10799:SF774 216 509 1.1E-87 T 23-04-2016 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Gene3D G3DSA:3.30.450.20 130 246 7.2E-18 T 23-04-2016 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 134 2.3E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 253 2.1E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Pfam PF08448 PAS fold 140 248 8.5E-11 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Pfam PF08448 PAS fold 20 128 1.2E-14 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SMART SM00052 429 675 3.3E-111 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Gene3D G3DSA:3.20.20.450 432 680 5.0E-101 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Pfam PF00990 Diguanylate cyclase, GGDEF domain 258 415 3.2E-49 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SUPERFAMILY SSF55785 5 126 5.41E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SMART SM00267 247 419 6.8E-69 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 417 2.1E-42 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Gene3D G3DSA:3.30.70.270 259 424 2.0E-57 T 23-04-2016 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SUPERFAMILY SSF55073 263 420 1.26E-50 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 PANTHER PTHR10799 618 637 1.1E-87 T 23-04-2016 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 PANTHER PTHR10799 216 509 1.1E-87 T 23-04-2016 MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SUPERFAMILY SSF141868 435 680 5.62E-90 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SMART SM00091 133 199 0.012 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 SMART SM00091 14 81 1.2E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13640 91e988dc557e28f7deb6629db67104dd 681 Gene3D G3DSA:3.30.450.20 5 126 3.3E-20 T 23-04-2016 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.2E-5 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 365 23.995 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 367 1.4E-129 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 PANTHER PTHR22926:SF5 2 367 2.2E-168 T 23-04-2016 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 PANTHER PTHR22926 2 367 2.2E-168 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 Pfam PF00953 Glycosyl transferase family 4 99 285 7.3E-36 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02330 435948ef74ed6b73bfddb03b3db55117 367 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS12180 7e6039a7d2f6e3d05eb9ea8c821a08c0 230 PANTHER PTHR39673 1 173 2.3E-17 T 23-04-2016 MSIP34_RS12180 7e6039a7d2f6e3d05eb9ea8c821a08c0 230 Gene3D G3DSA:2.160.20.60 31 199 6.5E-34 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS12180 7e6039a7d2f6e3d05eb9ea8c821a08c0 230 Pfam PF01493 GXGXG motif 33 182 1.5E-13 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS12180 7e6039a7d2f6e3d05eb9ea8c821a08c0 230 PIRSF PIRSF006519 1 230 4.4E-70 T 23-04-2016 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein MSIP34_RS12180 7e6039a7d2f6e3d05eb9ea8c821a08c0 230 SUPERFAMILY SSF69336 6 199 1.83E-42 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 Gene3D G3DSA:3.40.50.2000 299 404 3.6E-7 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 PANTHER PTHR23417:SF2 1 112 2.8E-100 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 PANTHER PTHR23417:SF2 131 141 2.8E-100 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 PANTHER PTHR23417:SF2 191 427 2.8E-100 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 SUPERFAMILY SSF53756 58 426 1.43E-18 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 209 3.5E-65 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 PANTHER PTHR23417 1 112 2.8E-100 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 PANTHER PTHR23417 131 141 2.8E-100 T 23-04-2016 MSIP34_RS13215 49921c95a78dfb5c9d19e496eb2e713d 428 PANTHER PTHR23417 191 427 2.8E-100 T 23-04-2016 MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 Gene3D G3DSA:2.40.50.140 1 43 3.7E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 PANTHER PTHR33991 1 210 1.2E-34 T 23-04-2016 MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 Pfam PF11967 Recombination protein O N terminal 1 51 7.5E-13 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 Pfam PF02565 Recombination protein O C terminal 59 204 8.8E-22 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 SUPERFAMILY SSF57863 62 197 3.4E-9 T 23-04-2016 MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 SUPERFAMILY SSF50249 1 51 1.32E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 TIGRFAM TIGR00613 reco: DNA repair protein RecO 1 197 1.1E-19 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 MSIP34_RS08995 9e8167ddb86c97d2cd93eafce20998bf 213 Hamap MF_00201 DNA repair protein RecO [recO]. 1 210 13.598 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 Gene3D G3DSA:2.40.290.10 4 171 1.5E-10 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 266 1.5E-95 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 SUPERFAMILY SSF100939 1 264 1.65E-51 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 PANTHER PTHR41251:SF1 3 293 3.1E-79 T 23-04-2016 MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 193 6.5E-33 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 SMART SM00559 53 181 2.1E-36 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 264 31.33 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 PIRSF PIRSF006493 1 293 4.0E-91 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type MSIP34_RS12915 16a0d80949a5a9b8aa24e1ff2abc2306 293 PANTHER PTHR41251 3 293 3.1E-79 T 23-04-2016 MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 PANTHER PTHR24567:SF22 6 233 4.1E-72 T 23-04-2016 MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 SUPERFAMILY SSF46785 147 222 6.71E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 Pfam PF13545 Crp-like helix-turn-helix domain 152 215 8.0E-15 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 PANTHER PTHR24567 6 233 4.1E-72 T 23-04-2016 MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 SUPERFAMILY SSF51206 9 137 1.52E-11 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 Gene3D G3DSA:2.60.120.10 9 136 1.1E-8 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 Gene3D G3DSA:1.10.10.10 147 218 9.0E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 SMART SM00100 12 137 0.0036 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS13355 2f57a81e6f2b3b472535a66353a91393 242 SMART SM00419 162 210 2.2E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS06405 e9b32dba8c82c0afa075113eb8e85d43 545 PANTHER PTHR30443:SF0 1 527 2.1E-158 T 23-04-2016 MSIP34_RS06405 e9b32dba8c82c0afa075113eb8e85d43 545 Gene3D G3DSA:3.40.720.10 233 518 3.4E-13 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS06405 e9b32dba8c82c0afa075113eb8e85d43 545 SUPERFAMILY SSF53649 233 508 6.11E-19 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS06405 e9b32dba8c82c0afa075113eb8e85d43 545 PANTHER PTHR30443 1 527 2.1E-158 T 23-04-2016 MSIP34_RS06405 e9b32dba8c82c0afa075113eb8e85d43 545 Pfam PF08019 Domain of unknown function (DUF1705) 58 203 1.3E-35 T 23-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 MSIP34_RS06405 e9b32dba8c82c0afa075113eb8e85d43 545 Pfam PF00884 Sulfatase 233 514 1.4E-39 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 SUPERFAMILY SSF52540 5 229 1.95E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 PANTHER PTHR24220:SF578 7 227 7.0E-123 T 23-04-2016 MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 Gene3D G3DSA:3.40.50.300 5 229 3.2E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 SMART SM00382 34 223 7.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 Pfam PF00005 ABC transporter 25 173 5.0E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS06210 00858155bb0e89f8b92892ecc0eebd5a 239 PANTHER PTHR24220 7 227 7.0E-123 T 23-04-2016 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 784 922 5.62E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 130 215 2.35E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 605 758 1.44E-16 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 7 114 4.58E-12 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 468 486 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 522 540 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 504 522 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 255 273 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 55 73 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 441 573 1.42E-19 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 205 300 1.96E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 SUPERFAMILY SSF51120 323 412 1.7E-7 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 PRINTS PR00313 NodO calcium binding signature 277 285 2.7E-9 T 23-04-2016 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 PRINTS PR00313 NodO calcium binding signature 358 367 2.7E-9 T 23-04-2016 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 PRINTS PR00313 NodO calcium binding signature 165 176 2.7E-9 T 23-04-2016 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 PRINTS PR00313 NodO calcium binding signature 250 258 2.7E-9 T 23-04-2016 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 323 401 8.3E-9 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 784 882 2.1E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 9 111 3.5E-9 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 568 752 1.2E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 203 305 5.2E-12 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 436 567 6.3E-24 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Gene3D G3DSA:2.150.10.10 128 202 2.8E-12 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 785 802 42.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 472 488 0.72 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 348 364 0.35 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 267 283 0.14 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 528 541 0.73 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 250 266 0.13 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 149 166 0.17 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 804 820 0.0097 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 659 666 4.1 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 510 524 0.14 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 691 707 0.0057 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 622 639 13.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 489 506 0.2 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 41 57 2.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 455 470 4.5E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 59 74 3.2 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04400 6df9ac11703137eeb4410ca9af295955 925 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 168 183 0.028 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13505 f5cd8d8c4aae7ea5d84a80d857359fcc 287 PANTHER PTHR33608 8 285 1.4E-15 T 23-04-2016 MSIP34_RS13505 f5cd8d8c4aae7ea5d84a80d857359fcc 287 Pfam PF01882 Protein of unknown function DUF58 41 118 2.5E-6 T 23-04-2016 IPR002881 Domain of unknown function DUF58 MSIP34_RS13505 f5cd8d8c4aae7ea5d84a80d857359fcc 287 SUPERFAMILY SSF53300 76 183 2.7E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 SUPERFAMILY SSF53720 7 417 9.69E-121 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 PIRSF PIRSF000151 1 418 1.8E-180 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 Gene3D G3DSA:3.40.605.10 3 225 1.1E-104 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 Gene3D G3DSA:3.40.605.10 376 417 1.1E-104 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 PANTHER PTHR11063:SF8 7 418 1.2E-179 T 23-04-2016 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 Pfam PF00171 Aldehyde dehydrogenase family 9 283 1.8E-18 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 Gene3D G3DSA:3.40.309.10 227 375 3.2E-43 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 417 42.241 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 407 3.9E-151 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 PANTHER PTHR11063 7 418 1.2E-179 T 23-04-2016 MSIP34_RS02905 43bc6ab64f9ac0f948853a502c4741f7 418 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 324 345 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 258 6.6E-37 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 SMART SM00062 31 259 1.6E-28 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Gene3D G3DSA:3.40.190.10 30 109 1.6E-18 T 23-04-2016 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Gene3D G3DSA:3.40.190.10 220 259 1.6E-18 T 23-04-2016 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 SUPERFAMILY SSF53955 279 443 1.14E-27 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 PANTHER PTHR21666:SF215 265 447 6.9E-84 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 PANTHER PTHR21666 265 447 6.9E-84 T 23-04-2016 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Gene3D G3DSA:1.10.530.10 422 444 3.1E-28 T 23-04-2016 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Gene3D G3DSA:1.10.530.10 268 387 3.1E-28 T 23-04-2016 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Pfam PF01464 Transglycosylase SLT domain 284 387 7.5E-15 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Gene3D G3DSA:3.40.190.10 110 201 8.4E-13 T 23-04-2016 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 2 457 41.65 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 MSIP34_RS06090 f4ab2b9956826f70dec1ee283cf07f2c 475 SUPERFAMILY SSF53850 32 259 1.59E-41 T 23-04-2016 MSIP34_RS06855 42d013ebc09ad1de811c733ddcf233f2 172 PANTHER PTHR38593 1 171 9.4E-15 T 23-04-2016 MSIP34_RS06855 42d013ebc09ad1de811c733ddcf233f2 172 Gene3D G3DSA:1.20.1260.10 27 148 2.2E-5 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS06855 42d013ebc09ad1de811c733ddcf233f2 172 Pfam PF13628 Domain of unknown function (DUF4142) 27 162 4.9E-37 T 23-04-2016 IPR025419 Domain of unknown function DUF4142 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 456 39.483 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 SUPERFAMILY SSF52374 1 313 1.45E-100 T 23-04-2016 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 SUPERFAMILY SSF47323 316 455 1.57E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 Gene3D G3DSA:1.20.120.640 307 386 1.9E-19 T 23-04-2016 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.5E-31 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.5E-31 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.5E-31 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.5E-31 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 PANTHER PTHR10890 1 456 2.6E-240 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 Pfam PF09190 DALR domain 342 397 4.1E-18 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.0E-135 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 Gene3D G3DSA:3.40.50.620 21 305 4.6E-112 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 455 6.1E-176 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 MSIP34_RS11310 8a0bcc4070de6977d4d4197487bc3b0d 456 SMART SM00840 342 397 3.2E-23 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 MSIP34_RS14035 871a28f1e30f6838a18ff0596576f657 276 Pfam PF08543 Phosphomethylpyrimidine kinase 15 259 1.8E-72 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 MSIP34_RS14035 871a28f1e30f6838a18ff0596576f657 276 PANTHER PTHR20858 5 258 3.4E-69 T 23-04-2016 MSIP34_RS14035 871a28f1e30f6838a18ff0596576f657 276 Gene3D G3DSA:3.40.1190.20 6 265 2.3E-76 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS14035 871a28f1e30f6838a18ff0596576f657 276 SUPERFAMILY SSF53613 4 268 1.16E-66 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS14035 871a28f1e30f6838a18ff0596576f657 276 PANTHER PTHR20858:SF17 5 258 3.4E-69 T 23-04-2016 MSIP34_RS04870 be85ca947947b437ac5876132108f963 456 TIGRFAM TIGR00908 2A0305: ethanolamine permease 3 447 4.0E-189 T 23-04-2016 IPR004757 Ethanolamine permease MSIP34_RS04870 be85ca947947b437ac5876132108f963 456 PANTHER PTHR11785 4 443 5.5E-139 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS04870 be85ca947947b437ac5876132108f963 456 PANTHER PTHR11785:SF337 4 443 5.5E-139 T 23-04-2016 MSIP34_RS04870 be85ca947947b437ac5876132108f963 456 PIRSF PIRSF006060 1 451 5.9E-71 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS04870 be85ca947947b437ac5876132108f963 456 Pfam PF13520 Amino acid permease 10 422 1.9E-41 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Gene3D G3DSA:3.30.70.270 518 688 3.7E-56 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Gene3D G3DSA:3.30.450.20 385 503 4.4E-16 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 SMART SM00052 692 938 1.8E-113 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Pfam PF09084 NMT1/THI5 like 54 261 4.7E-54 T 23-04-2016 IPR015168 SsuA/THI5-like MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 SUPERFAMILY SSF141868 697 944 7.72E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Pfam PF08447 PAS fold 413 498 6.6E-7 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 SUPERFAMILY SSF53850 50 267 5.18E-33 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 SMART SM00267 505 682 3.3E-55 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 PANTHER PTHR33121 642 941 1.0E-77 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 PANTHER PTHR33121 128 138 1.0E-77 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Gene3D G3DSA:3.40.190.10 125 247 5.4E-11 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 PANTHER PTHR33121:SF13 642 941 1.0E-77 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 PANTHER PTHR33121:SF13 128 138 1.0E-77 T 23-04-2016 MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Gene3D G3DSA:3.20.20.450 695 941 3.7E-96 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 681 4.8E-43 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Pfam PF00563 EAL domain 698 933 2.4E-70 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 SUPERFAMILY SSF55785 399 507 1.01E-13 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 Pfam PF00990 Diguanylate cyclase, GGDEF domain 516 677 7.5E-47 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12425 f5fcd09825715e221875b55c5f97d62d 950 SUPERFAMILY SSF55073 521 684 3.65E-49 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.225 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 4.7E-95 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 Gene3D G3DSA:3.30.1270.10 82 134 4.4E-37 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 Gene3D G3DSA:3.30.1270.10 212 240 4.4E-37 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 Gene3D G3DSA:3.30.70.980 135 203 3.2E-28 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 PANTHER PTHR12532 1 241 7.5E-111 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 SUPERFAMILY SSF75625 3 239 3.66E-95 T 23-04-2016 IPR029072 YebC-like MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 Pfam PF01709 Transcriptional regulator 5 236 9.9E-95 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like MSIP34_RS12105 3a2cd6a0252eeddaece1a5ae5255e1fe 241 Gene3D G3DSA:1.10.10.200 1 78 1.4E-36 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like MSIP34_RS11730 ae667caec815541b3d642ab279ab7e6f 181 Gene3D G3DSA:3.40.50.300 10 176 5.9E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11730 ae667caec815541b3d642ab279ab7e6f 181 SUPERFAMILY SSF52540 11 172 1.25E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11730 ae667caec815541b3d642ab279ab7e6f 181 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 14 150 2.0E-49 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 MSIP34_RS11730 ae667caec815541b3d642ab279ab7e6f 181 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 20 173 2.2E-43 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 MSIP34_RS11730 ae667caec815541b3d642ab279ab7e6f 181 PANTHER PTHR40072:SF2 23 145 4.9E-16 T 23-04-2016 MSIP34_RS11730 ae667caec815541b3d642ab279ab7e6f 181 PANTHER PTHR40072 23 145 4.9E-16 T 23-04-2016 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 328 4.9E-111 T 23-04-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 Gene3D G3DSA:3.20.20.70 73 336 1.2E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 Gene3D G3DSA:3.30.70.1140 1 70 1.5E-25 T 23-04-2016 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 PANTHER PTHR21057 2 336 3.0E-162 T 23-04-2016 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 Pfam PF00793 DAHP synthetase I family 92 323 1.0E-67 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 SUPERFAMILY SSF51569 1 337 1.1E-113 T 23-04-2016 MSIP34_RS07785 fc778f6f51c56b5a6663545bed7d6d08 339 PANTHER PTHR21057:SF1 2 336 3.0E-162 T 23-04-2016 MSIP34_RS07250 2d73733aa7143009b1d36d60b84ff79e 214 PANTHER PTHR18901 1 186 1.3E-34 T 23-04-2016 MSIP34_RS07250 2d73733aa7143009b1d36d60b84ff79e 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 182 1.8E-24 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS07250 2d73733aa7143009b1d36d60b84ff79e 214 PANTHER PTHR18901:SF23 1 186 1.3E-34 T 23-04-2016 MSIP34_RS07250 2d73733aa7143009b1d36d60b84ff79e 214 Gene3D G3DSA:1.10.150.240 18 71 1.3E-8 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 MSIP34_RS07250 2d73733aa7143009b1d36d60b84ff79e 214 SUPERFAMILY SSF56784 1 209 1.47E-37 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS07250 2d73733aa7143009b1d36d60b84ff79e 214 Gene3D G3DSA:3.40.50.1000 72 211 1.8E-24 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.8E-46 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 PANTHER PTHR13501 1 107 2.0E-50 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 26.011 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 9.4E-33 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 SUPERFAMILY SSF54843 1 108 2.22E-42 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01605 83418e352750c23192b16507ebd81521 109 Gene3D G3DSA:3.90.470.10 1 108 8.6E-43 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05820 5ff802b421f1d316a22225e471b345a2 260 SUPERFAMILY SSF55315 4 105 3.06E-17 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like MSIP34_RS05820 5ff802b421f1d316a22225e471b345a2 260 Pfam PF00588 SpoU rRNA Methylase family 114 249 1.4E-32 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 MSIP34_RS05820 5ff802b421f1d316a22225e471b345a2 260 SUPERFAMILY SSF75217 109 257 1.24E-37 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS05820 5ff802b421f1d316a22225e471b345a2 260 Gene3D G3DSA:3.30.1330.30 5 104 1.8E-15 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like MSIP34_RS05820 5ff802b421f1d316a22225e471b345a2 260 Gene3D G3DSA:3.40.1280.10 112 258 2.3E-42 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS05820 5ff802b421f1d316a22225e471b345a2 260 PANTHER PTHR12029 6 260 8.8E-44 T 23-04-2016 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 Pfam PF13847 Methyltransferase domain 117 260 4.7E-16 T 23-04-2016 IPR025714 Methyltransferase domain MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 291 5.9E-87 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 Gene3D G3DSA:1.10.8.10 3 91 3.9E-23 T 23-04-2016 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 PANTHER PTHR18895:SF64 3 295 2.7E-94 T 23-04-2016 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 SUPERFAMILY SSF53335 4 292 1.36E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 Gene3D G3DSA:3.40.50.150 93 294 5.3E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 295 9.3E-74 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 PANTHER PTHR18895 3 295 2.7E-94 T 23-04-2016 MSIP34_RS12675 226aef3fcd6f0a257a92fa19676c2d85 297 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 295 42.221 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 MSIP34_RS04980 db57e977a583afaabd0bc70a03d3b777 242 SUPERFAMILY SSF51182 1 233 2.12E-73 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS04980 db57e977a583afaabd0bc70a03d3b777 242 PANTHER PTHR13903 1 233 7.2E-100 T 23-04-2016 IPR012093 Pirin MSIP34_RS04980 db57e977a583afaabd0bc70a03d3b777 242 Pfam PF02678 Pirin 8 119 2.0E-35 T 23-04-2016 IPR003829 Pirin, N-terminal domain MSIP34_RS04980 db57e977a583afaabd0bc70a03d3b777 242 Gene3D G3DSA:2.60.120.10 3 237 2.3E-68 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS04980 db57e977a583afaabd0bc70a03d3b777 242 PANTHER PTHR13903:SF7 1 233 7.2E-100 T 23-04-2016 MSIP34_RS04980 db57e977a583afaabd0bc70a03d3b777 242 PIRSF PIRSF006232 1 241 6.1E-52 T 23-04-2016 IPR012093 Pirin MSIP34_RS07285 c29ffad60acba74643e70730e86d52f9 103 PIRSF PIRSF003135 1 103 7.2E-23 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 MSIP34_RS07285 c29ffad60acba74643e70730e86d52f9 103 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 9 102 2.6E-31 T 23-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 MSIP34_RS07285 c29ffad60acba74643e70730e86d52f9 103 Gene3D G3DSA:2.40.50.140 6 102 6.1E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS07285 c29ffad60acba74643e70730e86d52f9 103 Pfam PF00436 Single-strand binding protein family 9 92 3.2E-7 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 MSIP34_RS07285 c29ffad60acba74643e70730e86d52f9 103 SUPERFAMILY SSF50249 7 102 3.15E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS14700 847eb1b2f8f216d8649cf914a0b58612 148 SUPERFAMILY SSF56349 4 138 1.44E-33 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS14700 847eb1b2f8f216d8649cf914a0b58612 148 PANTHER PTHR30349 1 137 3.3E-26 T 23-04-2016 MSIP34_RS14700 847eb1b2f8f216d8649cf914a0b58612 148 PANTHER PTHR30349:SF20 1 137 3.3E-26 T 23-04-2016 MSIP34_RS14700 847eb1b2f8f216d8649cf914a0b58612 148 Gene3D G3DSA:1.10.443.10 4 138 6.3E-34 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS14700 847eb1b2f8f216d8649cf914a0b58612 148 Pfam PF00589 Phage integrase family 4 130 1.8E-18 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS12530 2973efeb93409f3a29f86e3505cc05b9 151 SUPERFAMILY SSF52821 17 150 1.44E-21 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS12530 2973efeb93409f3a29f86e3505cc05b9 151 Pfam PF00581 Rhodanese-like domain 27 126 4.1E-9 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS12530 2973efeb93409f3a29f86e3505cc05b9 151 SMART SM00450 27 133 2.2E-9 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS12530 2973efeb93409f3a29f86e3505cc05b9 151 Gene3D G3DSA:3.40.250.10 21 150 1.9E-33 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 463 34.207 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Gene3D G3DSA:3.40.50.620 2 67 1.7E-53 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Gene3D G3DSA:3.40.50.620 185 234 1.7E-53 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Gene3D G3DSA:3.90.800.10 68 184 2.0E-39 T 23-04-2016 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Gene3D G3DSA:1.10.10.350 367 462 1.1E-27 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Gene3D G3DSA:1.10.1160.10 237 318 8.1E-36 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PANTHER PTHR11451 3 350 1.6E-101 T 23-04-2016 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 SUPERFAMILY SSF52374 3 301 2.04E-114 T 23-04-2016 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PANTHER PTHR11451:SF41 3 350 1.6E-101 T 23-04-2016 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 SUPERFAMILY SSF48163 303 461 4.19E-41 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 309 9.0E-108 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 207 1.4E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 183 193 1.4E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS08580 9d1eb8f990c7e6a6e32bafa4f9a76386 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 461 2.3E-181 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 SUPERFAMILY SSF52540 7 340 1.73E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 348 1.2E-132 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 Pfam PF00437 Type II/IV secretion system protein 12 247 1.7E-36 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 198 212 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 PANTHER PTHR30486:SF3 4 362 1.0E-143 T 23-04-2016 MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 Gene3D G3DSA:3.40.50.300 108 347 5.7E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06595 d7a5fa2beb39a1f2a6bd5538b96c6579 362 PANTHER PTHR30486 4 362 1.0E-143 T 23-04-2016 MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 PANTHER PTHR10344 1 188 7.2E-53 T 23-04-2016 MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 SUPERFAMILY SSF52540 1 183 1.81E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 Gene3D G3DSA:3.40.50.300 1 189 2.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 Pfam PF02223 Thymidylate kinase 1 181 2.5E-44 T 23-04-2016 MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 Hamap MF_00165 Thymidylate kinase [tmk]. 1 191 23.775 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 181 3.1E-44 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 MSIP34_RS07025 2e25da962e3017b70c213d72deda4c81 191 PANTHER PTHR10344:SF0 1 188 7.2E-53 T 23-04-2016 MSIP34_RS12600 35d4bd153156a8e1bb3c31db5664bb2b 193 PANTHER PTHR40278:SF1 1 193 2.2E-37 T 23-04-2016 MSIP34_RS12600 35d4bd153156a8e1bb3c31db5664bb2b 193 PANTHER PTHR40278 1 193 2.2E-37 T 23-04-2016 MSIP34_RS12600 35d4bd153156a8e1bb3c31db5664bb2b 193 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 1.1E-19 T 23-04-2016 IPR007813 Fimbrial assembly PilN MSIP34_RS00840 663f498285cec5734bc5153e87cdaeb3 101 SUPERFAMILY SSF102829 7 94 2.62E-22 T 23-04-2016 IPR007838 Cell division protein ZapA-like MSIP34_RS00840 663f498285cec5734bc5153e87cdaeb3 101 Pfam PF05164 Cell division protein ZapA 7 95 2.3E-22 T 23-04-2016 IPR007838 Cell division protein ZapA-like MSIP34_RS00840 663f498285cec5734bc5153e87cdaeb3 101 PANTHER PTHR34981:SF1 3 97 1.2E-18 T 23-04-2016 MSIP34_RS00840 663f498285cec5734bc5153e87cdaeb3 101 PANTHER PTHR34981 3 97 1.2E-18 T 23-04-2016 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 Gene3D G3DSA:3.40.190.10 90 176 1.2E-13 T 23-04-2016 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.2E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 SUPERFAMILY SSF53850 85 293 6.3E-31 T 23-04-2016 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 Gene3D G3DSA:3.40.190.10 177 260 1.2E-10 T 23-04-2016 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 Gene3D G3DSA:1.10.10.10 1 83 2.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 SUPERFAMILY SSF46785 1 111 8.16E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 Pfam PF03466 LysR substrate binding domain 89 293 5.0E-32 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 PANTHER PTHR30126:SF25 1 301 1.7E-103 T 23-04-2016 MSIP34_RS05535 98d4d2584a70c33dacc06d732e0bd8d5 303 PANTHER PTHR30126 1 301 1.7E-103 T 23-04-2016 MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 SMART SM00248 92 121 3.3E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 SMART SM00248 58 87 0.0023 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 SUPERFAMILY SSF48403 36 151 1.12E-24 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 Gene3D G3DSA:1.25.40.20 32 151 5.4E-26 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 PANTHER PTHR24188 44 150 1.4E-24 T 23-04-2016 MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 Pfam PF12796 Ankyrin repeats (3 copies) 37 122 8.9E-17 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 PRINTS PR01415 Ankyrin repeat signature 108 122 3.3E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04580 fcd71ab01ba53ebe6fc78e74eceeeba1 160 PRINTS PR01415 Ankyrin repeat signature 59 74 3.3E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 Gene3D G3DSA:2.102.10.10 48 190 1.8E-35 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 SUPERFAMILY SSF50022 30 194 3.93E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 Gene3D G3DSA:1.20.5.510 4 40 4.6E-8 T 23-04-2016 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 120 131 1.2E-8 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 1.2E-8 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 1.2E-8 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 3 40 4.5E-13 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 Pfam PF00355 Rieske [2Fe-2S] domain 103 176 1.9E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 PANTHER PTHR10134:SF8 1 195 8.8E-92 T 23-04-2016 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 191 5.5E-68 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 MSIP34_RS01460 8b32129a558d75c87bc63e7210df3215 198 PANTHER PTHR10134 1 195 8.8E-92 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 SMART SM00228 281 363 1.1E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 Gene3D G3DSA:2.30.42.10 283 380 6.5E-26 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 Gene3D G3DSA:2.40.10.10 54 169 2.5E-40 T 23-04-2016 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PANTHER PTHR22939 54 376 1.1E-130 T 23-04-2016 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PRINTS PR00834 HtrA/DegQ protease family signature 235 252 7.46859E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PRINTS PR00834 HtrA/DegQ protease family signature 117 129 7.46859E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 7.46859E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PRINTS PR00834 HtrA/DegQ protease family signature 138 158 7.46859E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PRINTS PR00834 HtrA/DegQ protease family signature 321 333 7.46859E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PRINTS PR00834 HtrA/DegQ protease family signature 213 230 7.46859E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 Pfam PF13365 Trypsin-like peptidase domain 108 242 1.6E-35 T 23-04-2016 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 Pfam PF13180 PDZ domain 282 370 7.4E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 SUPERFAMILY SSF50494 55 273 4.7E-68 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 SUPERFAMILY SSF50156 239 364 3.02E-25 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 57 376 4.1E-128 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 Gene3D G3DSA:2.40.10.10 170 282 2.5E-43 T 23-04-2016 MSIP34_RS01450 a6771f7a5e2581602f9013c62a3a56e2 384 PANTHER PTHR22939:SF93 54 376 1.1E-130 T 23-04-2016 MSIP34_RS05255 015ee962b15e10858936393646e2b526 188 Pfam PF05137 Fimbrial assembly protein (PilN) 116 160 2.2E-5 T 23-04-2016 IPR007813 Fimbrial assembly PilN MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 SUPERFAMILY SSF52540 251 445 5.81E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 PANTHER PTHR30473 9 184 1.3E-174 T 23-04-2016 MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 PANTHER PTHR30473 204 465 1.3E-174 T 23-04-2016 MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 SUPERFAMILY SSF88723 107 161 1.29E-12 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 SUPERFAMILY SSF88723 11 71 1.29E-12 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 Gene3D G3DSA:3.40.50.300 250 464 5.7E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 PANTHER PTHR30473:SF2 9 184 1.3E-174 T 23-04-2016 MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 PANTHER PTHR30473:SF2 204 465 1.3E-174 T 23-04-2016 MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 Pfam PF02562 PhoH-like protein 252 451 7.2E-53 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 Gene3D G3DSA:3.40.50.1010 11 70 4.6E-11 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 Gene3D G3DSA:3.40.50.1010 107 163 4.6E-11 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 Pfam PF13638 PIN domain 12 156 4.3E-40 T 23-04-2016 IPR002716 PIN domain MSIP34_RS11780 6ed2a4deb394603407bf67f9e08c1db0 465 SMART SM00670 10 144 1.7E-8 T 23-04-2016 IPR002716 PIN domain MSIP34_RS05360 1b731c214e4452ea1afe915ab9e0f916 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 3.1E-12 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 MSIP34_RS05360 1b731c214e4452ea1afe915ab9e0f916 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 46.124 T 23-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 MSIP34_RS05360 1b731c214e4452ea1afe915ab9e0f916 226 PANTHER PTHR41536 2 226 2.3E-108 T 23-04-2016 MSIP34_RS05360 1b731c214e4452ea1afe915ab9e0f916 226 SMART SM00702 1 177 3.1E-20 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 MSIP34_RS05360 1b731c214e4452ea1afe915ab9e0f916 226 PANTHER PTHR41536:SF1 2 226 2.3E-108 T 23-04-2016 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 Hamap MF_00235 Adenylate kinase [adk]. 1 217 53.036 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 PRINTS PR00094 Adenylate kinase signature 173 187 3.0E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.0E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.0E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.0E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 PRINTS PR00094 Adenylate kinase signature 156 171 3.0E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 SUPERFAMILY SSF52540 4 186 5.22E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 PANTHER PTHR23359 1 184 9.7E-106 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 188 1.1E-74 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 Gene3D G3DSA:3.40.50.300 2 215 1.6E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 Pfam PF00406 Adenylate kinase 5 185 7.5E-59 T 23-04-2016 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.7E-16 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS02925 779f1e6abc205f927871cda60b3db518 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 Gene3D G3DSA:3.30.499.10 334 465 4.3E-61 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.712 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PANTHER PTHR11670 1 306 1.1E-296 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PANTHER PTHR11670 326 465 1.1E-296 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 Gene3D G3DSA:3.40.1060.10 165 278 1.6E-39 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 2.3E-241 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 194 207 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 342 353 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 81 94 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 107 115 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 399 412 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 285 299 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 132 147 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 208 221 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PRINTS PR00415 Aconitase family signature 118 131 1.9E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PANTHER PTHR11670:SF38 1 306 1.1E-296 T 23-04-2016 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 PANTHER PTHR11670:SF38 326 465 1.1E-296 T 23-04-2016 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 Gene3D G3DSA:3.30.499.10 3 156 8.5E-21 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 SUPERFAMILY SSF53732 2 465 4.32E-166 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS07905 5dee358e551674a99da857408388513e 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 6.7E-154 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 PANTHER PTHR24220 19 256 1.6E-96 T 23-04-2016 MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 SMART SM00382 42 232 3.8E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 Gene3D G3DSA:3.40.50.300 18 242 3.2E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 SUPERFAMILY SSF52540 17 242 7.03E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 Pfam PF00005 ABC transporter 35 183 6.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS12230 82ca1c589184bfbb8705ba0a823b82bc 264 PANTHER PTHR24220:SF483 19 256 1.6E-96 T 23-04-2016 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 PIRSF PIRSF006293 1 224 9.5E-78 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 SUPERFAMILY SSF52402 3 224 1.01E-62 T 23-04-2016 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 PANTHER PTHR11587 2 222 2.4E-103 T 23-04-2016 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 Pfam PF06508 Queuosine biosynthesis protein QueC 4 213 5.6E-78 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 PANTHER PTHR11587:SF3 2 222 2.4E-103 T 23-04-2016 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 220 54.989 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 Gene3D G3DSA:3.40.50.620 2 224 1.5E-76 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS12045 c20320ef508eb049db2263b95cfbe6c5 225 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 8.3E-60 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 PANTHER PTHR24198 46 322 7.6E-96 T 23-04-2016 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SUPERFAMILY SSF48403 39 322 6.96E-76 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 Pfam PF12796 Ankyrin repeats (3 copies) 44 131 1.2E-17 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 Pfam PF12796 Ankyrin repeats (3 copies) 270 318 4.0E-6 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 Pfam PF12796 Ankyrin repeats (3 copies) 171 263 2.1E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 Gene3D G3DSA:1.25.40.20 229 320 1.3E-31 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 298 325 330.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 265 294 0.11 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 232 261 0.018 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 133 162 0.29 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 67 96 6.0E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 166 195 8.4E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 33 63 230.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 100 129 0.0017 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 SMART SM00248 199 228 3.2E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 PRINTS PR01415 Ankyrin repeat signature 68 83 8.0E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 PRINTS PR01415 Ankyrin repeat signature 215 229 8.0E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 Gene3D G3DSA:1.25.40.20 39 146 3.8E-38 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS04625 7c461776233e7437309638f8723232d4 325 Gene3D G3DSA:1.25.40.20 147 228 4.8E-31 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 Pfam PF00593 TonB dependent receptor 488 773 2.4E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 Gene3D G3DSA:2.40.170.20 189 775 6.1E-104 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 SUPERFAMILY SSF56935 59 775 7.56E-113 T 23-04-2016 MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 Gene3D G3DSA:2.170.130.10 62 180 1.1E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 PANTHER PTHR32552:SF37 26 775 6.0E-59 T 23-04-2016 MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 177 9.5E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08830 16a2cb54bf356a43137512a01715890e 786 PANTHER PTHR32552 26 775 6.0E-59 T 23-04-2016 MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 Gene3D G3DSA:2.60.440.10 172 250 8.9E-23 T 23-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 SUPERFAMILY SSF160950 3 250 1.31E-86 T 23-04-2016 MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 Pfam PF07072 Protein of unknown function (DUF1342) 16 226 2.3E-79 T 23-04-2016 IPR009777 Cell division protein ZapD MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 PANTHER PTHR39455:SF1 3 251 1.0E-56 T 23-04-2016 MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 Gene3D G3DSA:1.10.3900.10 10 171 1.1E-60 T 23-04-2016 MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 PANTHER PTHR39455 3 251 1.0E-56 T 23-04-2016 MSIP34_RS02585 c09de4feadd7078a1b9d1331cdfb4b57 252 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 250 31.934 T 23-04-2016 IPR009777 Cell division protein ZapD MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 SUPERFAMILY SSF51316 5 131 2.14E-60 T 23-04-2016 IPR011057 Mss4-like MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 Pfam PF01641 SelR domain 10 129 4.0E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 PANTHER PTHR10173 4 129 9.6E-67 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 PANTHER PTHR10173:SF18 4 129 9.6E-67 T 23-04-2016 MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 131 1.9E-58 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 Gene3D G3DSA:2.170.150.20 4 131 6.2E-63 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 MSIP34_RS02670 3566f27a0eb124d574ffaa55ae731d8a 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 38.677 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SMART SM00341 535 609 8.2E-15 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Pfam PF00271 Helicase conserved C-terminal domain 222 329 1.8E-16 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SMART SM00490 248 329 1.9E-25 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 PANTHER PTHR13710:SF81 4 608 2.3E-281 T 23-04-2016 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Pfam PF00270 DEAD/DEAH box helicase 23 182 1.6E-18 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 607 1.6E-248 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Gene3D G3DSA:1.10.150.80 538 607 1.5E-17 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Gene3D G3DSA:3.40.50.300 203 342 1.4E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Pfam PF09382 RQC domain 405 514 1.4E-37 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SUPERFAMILY SSF52540 205 452 8.92E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Pfam PF00570 HRDC domain 540 605 1.7E-22 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Gene3D G3DSA:1.10.10.10 343 514 2.8E-59 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 9 462 1.5E-153 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Pfam PF16124 RecQ zinc-binding 341 403 2.0E-18 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 Gene3D G3DSA:3.40.50.300 3 202 5.3E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SMART SM00487 15 215 6.7E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 PANTHER PTHR13710 4 608 2.3E-281 T 23-04-2016 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SUPERFAMILY SSF52540 5 194 9.29E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SUPERFAMILY SSF47819 533 608 5.01E-22 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 MSIP34_RS07755 17501e57c576b796e8d1c3bae285582f 609 SMART SM00956 410 513 1.6E-51 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 MSIP34_RS12340 c933ececcc59551f7ea98c70f8623d4e 84 PANTHER PTHR34404 2 71 3.6E-17 T 23-04-2016 MSIP34_RS12340 c933ececcc59551f7ea98c70f8623d4e 84 Pfam PF09723 Zinc ribbon domain 1 41 2.2E-14 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain MSIP34_RS12340 c933ececcc59551f7ea98c70f8623d4e 84 SMART SM00834 1 43 2.4E-17 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain MSIP34_RS12340 c933ececcc59551f7ea98c70f8623d4e 84 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 53 6.9E-21 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain MSIP34_RS12340 c933ececcc59551f7ea98c70f8623d4e 84 PANTHER PTHR34404:SF2 2 71 3.6E-17 T 23-04-2016 MSIP34_RS04675 bfddf5718e828127063e7e101971b790 177 PANTHER PTHR36917 1 177 4.7E-58 T 23-04-2016 MSIP34_RS04675 bfddf5718e828127063e7e101971b790 177 Pfam PF04279 Intracellular septation protein A 1 175 2.1E-69 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 MSIP34_RS04675 bfddf5718e828127063e7e101971b790 177 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.978 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 MSIP34_RS04675 bfddf5718e828127063e7e101971b790 177 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 4.9E-58 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 MSIP34_RS04675 bfddf5718e828127063e7e101971b790 177 PANTHER PTHR36917:SF1 1 177 4.7E-58 T 23-04-2016 MSIP34_RS06570 b715494e9be7a10714e0c339b9aae506 281 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 11 266 2.7E-90 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 MSIP34_RS06570 b715494e9be7a10714e0c339b9aae506 281 SUPERFAMILY SSF53613 7 267 6.08E-81 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS06570 b715494e9be7a10714e0c339b9aae506 281 PANTHER PTHR20858 7 281 1.3E-120 T 23-04-2016 MSIP34_RS06570 b715494e9be7a10714e0c339b9aae506 281 Gene3D G3DSA:3.40.1190.20 9 266 2.1E-102 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS06570 b715494e9be7a10714e0c339b9aae506 281 Pfam PF08543 Phosphomethylpyrimidine kinase 18 265 7.9E-93 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 MSIP34_RS06570 b715494e9be7a10714e0c339b9aae506 281 PANTHER PTHR20858:SF17 7 281 1.3E-120 T 23-04-2016 MSIP34_RS04880 c5089402bb3262a2a82b5489d22450b0 271 PANTHER PTHR39330 11 268 9.7E-91 T 23-04-2016 MSIP34_RS04880 c5089402bb3262a2a82b5489d22450b0 271 PIRSF PIRSF018982 1 261 1.6E-95 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 MSIP34_RS04880 c5089402bb3262a2a82b5489d22450b0 271 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 16 250 2.1E-90 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 148 164 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 6 346 9.8E-132 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 Gene3D G3DSA:3.30.360.10 162 314 8.6E-61 T 23-04-2016 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 Gene3D G3DSA:3.40.50.720 4 161 2.4E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 144 2.6E-36 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 SUPERFAMILY SSF51735 3 180 1.21E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 SUPERFAMILY SSF55347 153 314 8.63E-52 T 23-04-2016 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 PANTHER PTHR32338:SF8 1 346 6.3E-177 T 23-04-2016 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 340 42.843 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 PANTHER PTHR32338 1 346 6.3E-177 T 23-04-2016 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 317 1.8E-18 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS00300 24bb35bd02648c0588b146cab2289a39 346 SMART SM00859 7 145 1.5E-61 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 PANTHER PTHR30055 2 201 9.0E-24 T 23-04-2016 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.4E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.4E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 SUPERFAMILY SSF46689 7 74 1.8E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 Gene3D G3DSA:1.10.357.10 10 202 3.0E-30 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 Pfam PF13977 Bacterial transcriptional repressor 102 197 3.6E-9 T 23-04-2016 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 64 2.1E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13405 cb73aa7e0213d47cb49d76bb41ee3dfd 211 SUPERFAMILY SSF48498 103 202 2.22E-7 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 PANTHER PTHR30348 263 294 1.2E-123 T 23-04-2016 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 PANTHER PTHR30348 161 243 1.2E-123 T 23-04-2016 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 PANTHER PTHR30348 4 135 1.2E-123 T 23-04-2016 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 Gene3D G3DSA:3.20.20.410 3 290 1.5E-87 T 23-04-2016 IPR002763 Protein of unknown function DUF72 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 SUPERFAMILY SSF117396 4 133 2.88E-78 T 23-04-2016 IPR002763 Protein of unknown function DUF72 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 SUPERFAMILY SSF117396 161 290 2.88E-78 T 23-04-2016 IPR002763 Protein of unknown function DUF72 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 PANTHER PTHR30348:SF7 263 294 1.2E-123 T 23-04-2016 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 PANTHER PTHR30348:SF7 161 243 1.2E-123 T 23-04-2016 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 PANTHER PTHR30348:SF7 4 135 1.2E-123 T 23-04-2016 MSIP34_RS03170 41561797f1cb24111e513b77740cda43 322 Pfam PF01904 Protein of unknown function DUF72 22 287 9.5E-68 T 23-04-2016 IPR002763 Protein of unknown function DUF72 MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 SUPERFAMILY SSF53383 8 379 4.57E-62 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 24 374 2.0E-64 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 PIRSF PIRSF000390 2 382 2.3E-68 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 Gene3D G3DSA:3.90.1150.10 259 380 3.3E-13 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 PANTHER PTHR30244:SF9 1 381 2.4E-51 T 23-04-2016 MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 PANTHER PTHR30244 1 381 2.4E-51 T 23-04-2016 MSIP34_RS13955 2627b29af569d5d96b1b1774dcb17f41 382 Gene3D G3DSA:3.40.640.10 7 254 3.4E-44 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS06160 6e59200f4ba3ce2bbdf9fb58dd93c981 220 Gene3D G3DSA:3.40.30.10 43 215 8.5E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS06160 6e59200f4ba3ce2bbdf9fb58dd93c981 220 SUPERFAMILY SSF52833 71 215 1.53E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 685 693 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 SUPERFAMILY SSF52540 320 595 2.97E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PIRSF PIRSF001174 5 784 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Gene3D G3DSA:3.30.230.10 599 780 5.1E-76 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 579 781 3.8E-97 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PANTHER PTHR10046:SF43 16 785 0.0 T 23-04-2016 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 TIGRFAM TIGR00763 lon: endopeptidase La 17 780 6.5E-300 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 3.2E-17 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 SMART SM00382 352 496 9.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 SMART SM00464 15 207 2.2E-72 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PANTHER PTHR10046 16 785 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Gene3D G3DSA:3.40.50.300 320 503 8.1E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 206 2.6E-40 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 SUPERFAMILY SSF54211 604 779 4.17E-59 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Hamap MF_01973 Lon protease [lon]. 16 781 71.085 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 Gene3D G3DSA:1.10.8.60 504 593 1.0E-31 T 23-04-2016 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 SUPERFAMILY SSF88697 16 206 1.29E-49 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 682 701 7.3E-56 T 23-04-2016 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 604 620 7.3E-56 T 23-04-2016 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 712 731 7.3E-56 T 23-04-2016 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 7.3E-56 T 23-04-2016 MSIP34_RS07425 4fce29d90cd47a1bb401c700514e9db3 811 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 735 753 7.3E-56 T 23-04-2016 MSIP34_RS12700 afab0a3d099dd539a40f00f56009dca6 221 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 213 1.8E-56 T 23-04-2016 MSIP34_RS12700 afab0a3d099dd539a40f00f56009dca6 221 PANTHER PTHR42208 1 220 1.7E-54 T 23-04-2016 MSIP34_RS12700 afab0a3d099dd539a40f00f56009dca6 221 PANTHER PTHR42208:SF1 1 220 1.7E-54 T 23-04-2016 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 SMART SM01374 1 122 1.9E-83 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.733 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.2E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 SUPERFAMILY SSF50193 1 122 6.67E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 Gene3D G3DSA:2.40.150.20 1 122 6.1E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.9E-53 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 PANTHER PTHR11761 1 122 6.8E-73 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01630 cf29fd3497c46e90c06a10f9a0538279 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PANTHER PTHR10724 3 522 4.0E-247 T 23-04-2016 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Gene3D G3DSA:2.40.50.140 29 108 2.2E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Gene3D G3DSA:2.40.50.140 289 369 3.5E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PIRSF PIRSF002111 2 542 2.0E-213 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Gene3D G3DSA:2.40.50.140 109 180 4.9E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Gene3D G3DSA:2.40.50.140 193 270 2.0E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Gene3D G3DSA:2.40.50.140 455 529 9.5E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SUPERFAMILY SSF50249 197 285 1.27E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Gene3D G3DSA:2.40.50.140 370 450 3.5E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 163 183 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 47 61 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 220 241 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 338 356 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 116 132 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 29 47 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 134 151 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 298 317 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PRINTS PR00681 Ribosomal protein S1 signature 92 111 4.3E-80 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SUPERFAMILY SSF50249 263 370 3.72E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SMART SM00316 111 179 1.3E-4 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SMART SM00316 283 355 1.6E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SMART SM00316 27 95 0.015 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SMART SM00316 370 442 5.3E-22 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SMART SM00316 457 528 5.2E-21 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SMART SM00316 198 268 1.6E-29 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SUPERFAMILY SSF50249 437 542 1.57E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Pfam PF00575 S1 RNA binding domain 458 528 1.1E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Pfam PF00575 S1 RNA binding domain 369 442 7.3E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Pfam PF00575 S1 RNA binding domain 197 268 1.2E-23 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Pfam PF00575 S1 RNA binding domain 283 355 1.3E-19 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 Pfam PF00575 S1 RNA binding domain 114 179 3.3E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SUPERFAMILY SSF50249 11 120 1.33E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 11 528 5.3E-206 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SUPERFAMILY SSF50249 112 191 5.74E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 PANTHER PTHR10724:SF6 3 522 4.0E-247 T 23-04-2016 MSIP34_RS05635 a9042097523776c7ba3c00500336921a 568 SUPERFAMILY SSF50249 353 448 4.15E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS11785 1c9bf4eb216644b83411140a71233402 387 Pfam PF07690 Major Facilitator Superfamily 8 342 6.2E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS11785 1c9bf4eb216644b83411140a71233402 387 SUPERFAMILY SSF103473 5 382 2.49E-28 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS11785 1c9bf4eb216644b83411140a71233402 387 PANTHER PTHR23513 4 373 1.3E-87 T 23-04-2016 MSIP34_RS11785 1c9bf4eb216644b83411140a71233402 387 PANTHER PTHR23513:SF8 4 373 1.3E-87 T 23-04-2016 MSIP34_RS11785 1c9bf4eb216644b83411140a71233402 387 Gene3D G3DSA:1.20.1250.20 6 181 1.2E-15 T 23-04-2016 MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 SUPERFAMILY SSF52540 6 245 7.24E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 Pfam PF00005 ABC transporter 24 177 8.3E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 PANTHER PTHR24220 9 246 1.9E-125 T 23-04-2016 MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 7 247 8.4E-116 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 PANTHER PTHR24220:SF366 9 246 1.9E-125 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 224 246 9.5E-8 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal MSIP34_RS03585 69d1ae1fea92067481df775d2543b0cc 247 Gene3D G3DSA:3.40.50.300 4 244 1.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 SUPERFAMILY SSF103473 82 307 7.59E-47 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 SUPERFAMILY SSF103473 331 491 7.59E-47 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 Pfam PF07690 Major Facilitator Superfamily 72 442 6.5E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 Gene3D G3DSA:1.20.1250.20 273 491 1.4E-16 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 PANTHER PTHR11360 14 56 2.6E-133 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 PANTHER PTHR11360 91 306 2.6E-133 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 PANTHER PTHR11360 335 503 2.6E-133 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 PANTHER PTHR11360:SF135 14 56 2.6E-133 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 PANTHER PTHR11360:SF135 91 306 2.6E-133 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 PANTHER PTHR11360:SF135 335 503 2.6E-133 T 23-04-2016 MSIP34_RS11355 23d3f0eaedbfec440b2bc59f1e996187 555 Gene3D G3DSA:1.20.1250.20 59 245 1.3E-16 T 23-04-2016 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 178 817 3.2E-108 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 SUPERFAMILY SSF56935 134 817 2.83E-103 T 23-04-2016 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 Pfam PF00593 TonB dependent receptor 585 815 1.1E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 800 817 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 Gene3D G3DSA:2.40.170.20 292 817 1.5E-104 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 Gene3D G3DSA:2.170.130.10 134 289 2.7E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 SMART SM00965 79 129 2.4E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 PANTHER PTHR32552 168 817 4.0E-202 T 23-04-2016 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 PANTHER PTHR32552 77 143 4.0E-202 T 23-04-2016 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 Pfam PF07715 TonB-dependent Receptor Plug Domain 178 273 6.3E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 PANTHER PTHR32552:SF14 168 817 4.0E-202 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 MSIP34_RS04085 07f27e8a8088432f7c6eb1f1996a8fe7 817 PANTHER PTHR32552:SF14 77 143 4.0E-202 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 Gene3D G3DSA:3.90.1150.10 281 401 1.1E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 PANTHER PTHR11751:SF306 18 401 6.6E-165 T 23-04-2016 MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 SUPERFAMILY SSF53383 7 401 3.4E-114 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 Gene3D G3DSA:3.40.640.10 49 280 2.8E-74 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 PANTHER PTHR11751 18 401 6.6E-165 T 23-04-2016 MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 MSIP34_RS06430 66ab73512191144a45b747d334d82f34 403 Pfam PF00155 Aminotransferase class I and II 36 397 8.8E-75 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 PANTHER PTHR30627:SF1 1 560 6.5E-215 T 23-04-2016 MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 PANTHER PTHR30627 1 560 6.5E-215 T 23-04-2016 MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 SUPERFAMILY SSF56601 176 565 2.44E-99 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 SUPERFAMILY SSF56519 57 223 7.46E-45 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 Gene3D G3DSA:3.90.1310.10 131 230 5.1E-31 T 23-04-2016 MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 Gene3D G3DSA:3.40.710.10 231 549 6.7E-94 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 Pfam PF00905 Penicillin binding protein transpeptidase domain 249 544 8.4E-79 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MSIP34_RS02315 151220d3eb612cdc849a845c6ac9f6bc 576 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 209 8.9E-20 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 MSIP34_RS09960 2ee1aebae15f9e07c46e64f5ae48fe73 160 Gene3D G3DSA:3.40.630.30 29 160 1.2E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS09960 2ee1aebae15f9e07c46e64f5ae48fe73 160 PANTHER PTHR13355 70 160 4.3E-19 T 23-04-2016 MSIP34_RS09960 2ee1aebae15f9e07c46e64f5ae48fe73 160 PANTHER PTHR13355:SF8 70 160 4.3E-19 T 23-04-2016 MSIP34_RS09960 2ee1aebae15f9e07c46e64f5ae48fe73 160 Pfam PF13673 Acetyltransferase (GNAT) domain 56 160 1.4E-19 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS09960 2ee1aebae15f9e07c46e64f5ae48fe73 160 SUPERFAMILY SSF55729 26 160 1.48E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS01320 8982d57f432f84fa9840a1c814f90abf 572 SMART SM00387 466 570 1.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01320 8982d57f432f84fa9840a1c814f90abf 572 Gene3D G3DSA:3.30.565.10 440 566 5.7E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01320 8982d57f432f84fa9840a1c814f90abf 572 SUPERFAMILY SSF55874 440 566 3.14E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01320 8982d57f432f84fa9840a1c814f90abf 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 566 1.4E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 333 2.5E-161 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 SMART SM00861 354 525 1.7E-62 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 SUPERFAMILY SSF52518 331 524 2.16E-65 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 SUPERFAMILY SSF52922 532 661 3.27E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 PANTHER PTHR11624 1 309 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 PANTHER PTHR11624 336 661 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 PANTHER PTHR11624:SF1 1 309 0.0 T 23-04-2016 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 PANTHER PTHR11624:SF1 336 661 0.0 T 23-04-2016 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 Gene3D G3DSA:3.40.50.970 6 318 5.5E-129 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 Gene3D G3DSA:3.40.50.920 537 661 6.3E-49 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 Gene3D G3DSA:3.40.50.970 326 532 6.7E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 Pfam PF02779 Transketolase, pyrimidine binding domain 354 523 3.6E-44 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 Pfam PF02780 Transketolase, C-terminal domain 548 653 9.6E-14 T 23-04-2016 IPR033248 Transketolase, C-terminal domain MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 660 2.9E-291 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 MSIP34_RS02460 54b06e9c1253a7956b86f33fdff29ed8 661 SUPERFAMILY SSF52518 6 328 3.07E-118 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 PANTHER PTHR21091 1 238 6.6E-73 T 23-04-2016 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 PANTHER PTHR21091:SF16 1 238 6.6E-73 T 23-04-2016 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 3 236 9.8E-92 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 SUPERFAMILY SSF53790 1 235 3.01E-72 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 Gene3D G3DSA:3.30.950.10 118 237 6.7E-42 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 Gene3D G3DSA:3.40.1010.10 2 117 7.3E-44 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 MSIP34_RS01810 8e1bf6881abf8938710b2b6d72b0e380 248 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 211 1.3E-48 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 3.0E-19 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 PANTHER PTHR10359 1 209 2.5E-87 T 23-04-2016 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 38.059 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 SUPERFAMILY SSF48150 2 207 3.61E-71 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 Gene3D G3DSA:1.10.1670.10 123 208 1.0E-34 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 Gene3D G3DSA:1.10.340.30 23 122 2.9E-35 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.7E-5 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 SMART SM00525 186 206 6.9E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 PANTHER PTHR10359:SF18 1 209 2.5E-87 T 23-04-2016 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 SMART SM00478 38 185 1.4E-55 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 TIGRFAM TIGR01083 nth: endonuclease III 4 194 4.6E-83 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 Pfam PF00633 Helix-hairpin-helix motif 100 127 2.7E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 MSIP34_RS09090 a61b25afb8824c6abf1d8cdfb6a02450 210 PIRSF PIRSF001435 1 210 7.4E-55 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 MSIP34_RS12670 0578a85179c80254e4f2405f51f3bdc6 146 Pfam PF09900 Predicted membrane protein (DUF2127) 7 143 9.9E-40 T 23-04-2016 IPR021125 Protein of unknown function DUF2127 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 SUPERFAMILY SSF53067 2 111 5.18E-24 T 23-04-2016 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 PANTHER PTHR34265 1 251 4.8E-25 T 23-04-2016 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 237 4.4E-23 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 256 16.64 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 Pfam PF03309 Type III pantothenate kinase 2 198 6.4E-43 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 Gene3D G3DSA:3.30.420.40 85 251 1.0E-35 T 23-04-2016 MSIP34_RS03335 5997a5a5494371a4d0c72aec073df088 256 SUPERFAMILY SSF53067 114 251 1.65E-20 T 23-04-2016 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 SUPERFAMILY SSF53383 1 357 1.59E-122 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 53.138 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 PANTHER PTHR21152 3 360 1.6E-194 T 23-04-2016 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 PIRSF PIRSF000525 1 360 1.2E-160 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 Gene3D G3DSA:3.40.640.10 17 256 4.5E-117 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 4.3E-166 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 PANTHER PTHR21152:SF1 3 360 1.6E-194 T 23-04-2016 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 Gene3D G3DSA:3.90.1150.10 258 358 7.0E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS07805 91f166f7de2d5986e9a1c987289fc44d 360 Pfam PF00266 Aminotransferase class-V 4 348 2.8E-62 T 23-04-2016 IPR000192 Aminotransferase class V domain MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 107 122 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 45 58 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 PANTHER PTHR32071 22 344 5.9E-145 T 23-04-2016 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 SUPERFAMILY SSF46689 234 343 2.87E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 Pfam PF02954 Bacterial regulatory protein, Fis family 304 340 1.3E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 Pfam PF00158 Sigma-54 interaction domain 25 187 1.6E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 Gene3D G3DSA:1.10.10.60 300 343 1.9E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 SMART SM00382 41 184 3.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 SUPERFAMILY SSF52540 29 263 1.42E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 Gene3D G3DSA:3.40.50.300 23 191 1.0E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 Gene3D G3DSA:1.10.8.60 193 265 2.4E-21 T 23-04-2016 MSIP34_RS09900 4de8f11b2d39fbf6967c05018798bcf6 350 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 234 243 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 Gene3D G3DSA:3.30.450.20 400 509 2.4E-22 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 SUPERFAMILY SSF55073 527 683 6.2E-45 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 SUPERFAMILY SSF103190 126 226 9.42E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 Pfam PF17201 Cache 3/Cache 2 fusion domain 60 254 1.3E-45 T 23-04-2016 IPR033462 Cache 3/Cache 2 fusion domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 400 518 9.1E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 518 677 7.5E-38 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 PANTHER PTHR10799:SF774 1 15 1.8E-26 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 PANTHER PTHR10799:SF774 555 675 1.8E-26 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 PANTHER PTHR10799:SF774 186 364 1.8E-26 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 SMART SM00267 511 683 2.0E-58 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 522 676 6.8E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 Pfam PF13426 PAS domain 408 509 3.1E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 SUPERFAMILY SSF55785 402 509 1.66E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 Gene3D G3DSA:3.30.70.270 523 688 1.9E-53 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 PANTHER PTHR10799 1 15 1.8E-26 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 PANTHER PTHR10799 555 675 1.8E-26 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 PANTHER PTHR10799 186 364 1.8E-26 T 23-04-2016 MSIP34_RS05670 afbc2cb75ed0494da8fb204417c72fef 693 SMART SM00091 397 467 9.4E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 SUPERFAMILY SSF51735 288 423 7.88E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 SUPERFAMILY SSF51735 124 259 6.22E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 PANTHER PTHR16254:SF21 45 259 7.7E-29 T 23-04-2016 MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 Gene3D G3DSA:1.10.287.70 19 102 1.1E-7 T 23-04-2016 MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 Gene3D G3DSA:3.40.50.720 125 260 3.9E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 Gene3D G3DSA:3.40.50.720 289 423 3.4E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 SUPERFAMILY SSF81324 8 144 7.46E-12 T 23-04-2016 MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 PANTHER PTHR16254 45 259 7.7E-29 T 23-04-2016 MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 Pfam PF02254 TrkA-N domain 126 247 7.9E-21 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MSIP34_RS03380 de8d8c821766030bb40ba4f978f032fd 568 Pfam PF02254 TrkA-N domain 291 397 2.2E-20 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 20 216 6.9E-58 T 23-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 Pfam PF13177 DNA polymerase III, delta subunit 20 183 3.1E-39 T 23-04-2016 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 PANTHER PTHR11669 11 89 5.1E-49 T 23-04-2016 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 PANTHER PTHR11669 108 217 5.1E-49 T 23-04-2016 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 PANTHER PTHR11669:SF8 11 89 5.1E-49 T 23-04-2016 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 PANTHER PTHR11669:SF8 108 217 5.1E-49 T 23-04-2016 MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 Gene3D G3DSA:3.40.50.300 9 184 8.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07020 2eb018737dc49a0d612a8bcc51674fcd 340 SUPERFAMILY SSF52540 12 219 2.27E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08870 21ed31a9668cd6d76bfde3f9e9228258 561 PANTHER PTHR32089:SF43 158 561 4.2E-111 T 23-04-2016 MSIP34_RS08870 21ed31a9668cd6d76bfde3f9e9228258 561 Gene3D G3DSA:1.10.287.950 312 530 1.1E-51 T 23-04-2016 MSIP34_RS08870 21ed31a9668cd6d76bfde3f9e9228258 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 558 2.7E-43 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS08870 21ed31a9668cd6d76bfde3f9e9228258 561 SMART SM00283 298 559 4.5E-81 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS08870 21ed31a9668cd6d76bfde3f9e9228258 561 SUPERFAMILY SSF58104 260 560 7.41E-67 T 23-04-2016 MSIP34_RS08870 21ed31a9668cd6d76bfde3f9e9228258 561 PANTHER PTHR32089 158 561 4.2E-111 T 23-04-2016 MSIP34_RS00700 b6e9de8875e446e960388bb0f8ec7931 404 Pfam PF04230 Polysaccharide pyruvyl transferase 73 318 2.7E-13 T 23-04-2016 IPR007345 Polysaccharide pyruvyl transferase MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 Pfam PF14559 Tetratricopeptide repeat 23 83 4.1E-6 T 23-04-2016 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 PANTHER PTHR40036 72 376 4.0E-38 T 23-04-2016 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 PANTHER PTHR40036:SF1 72 376 4.0E-38 T 23-04-2016 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 Pfam PF13414 TPR repeat 90 127 2.3E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 275 339 1.5E-8 T 23-04-2016 IPR008884 Macrocin-O-methyltransferase MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 SUPERFAMILY SSF48452 37 182 8.43E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 SUPERFAMILY SSF53335 179 354 1.95E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 SMART SM00028 45 78 1.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 SMART SM00028 79 112 1.9E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 SMART SM00028 113 146 0.51 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12555 1f7aebab03cbf948ebdf893380d2fa88 380 Gene3D G3DSA:1.25.40.10 17 164 4.9E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 303 2.6E-109 T 23-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 3.7E-38 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 SUPERFAMILY SSF48179 169 300 7.37E-39 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 PANTHER PTHR11811:SF28 1 303 1.5E-142 T 23-04-2016 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 SMART SM01350 171 299 1.7E-5 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 SUPERFAMILY SSF51735 1 160 4.29E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 8.0E-27 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 236 263 8.0E-27 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 62 91 8.0E-27 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 160 188 8.0E-27 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 Gene3D G3DSA:3.40.50.720 1 172 1.6E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 171 280 1.2E-22 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 PANTHER PTHR11811 1 303 1.5E-142 T 23-04-2016 MSIP34_RS05585 255b9731113d9bcc33d6f5b6fb0af5ce 303 Gene3D G3DSA:1.10.1040.10 173 280 2.6E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MSIP34_RS13255 998649fa6f7bcd2132265858a7348cc5 276 SMART SM00382 47 228 1.8E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS13255 998649fa6f7bcd2132265858a7348cc5 276 Gene3D G3DSA:3.40.50.300 16 225 4.7E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13255 998649fa6f7bcd2132265858a7348cc5 276 Pfam PF00005 ABC transporter 41 179 3.6E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS13255 998649fa6f7bcd2132265858a7348cc5 276 SUPERFAMILY SSF52540 22 244 1.49E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13255 998649fa6f7bcd2132265858a7348cc5 276 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS13255 998649fa6f7bcd2132265858a7348cc5 276 PANTHER PTHR24220 23 225 2.1E-89 T 23-04-2016 MSIP34_RS13240 faa2640e8d1285abc857d60efb37de09 790 SUPERFAMILY SSF89550 302 390 5.1E-7 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 MSIP34_RS13240 faa2640e8d1285abc857d60efb37de09 790 SUPERFAMILY SSF89550 418 541 5.1E-7 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 Pfam PF00005 ABC transporter 365 518 1.7E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 Gene3D G3DSA:1.20.1560.10 12 332 2.5E-55 T 23-04-2016 MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 SUPERFAMILY SSF52540 347 590 1.43E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 PANTHER PTHR24221 3 589 9.4E-134 T 23-04-2016 MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 Gene3D G3DSA:3.40.50.300 350 589 4.1E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 SMART SM00382 373 568 1.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 Pfam PF00664 ABC transporter transmembrane region 28 302 1.3E-28 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS00625 bca8ae4e2966297dafa0b3ea943f6d43 594 SUPERFAMILY SSF90123 11 332 3.14E-58 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 SMART SM00382 31 221 1.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 Pfam PF00005 ABC transporter 22 165 7.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 SUPERFAMILY SSF52540 3 227 5.94E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 PANTHER PTHR24220 8 227 1.6E-100 T 23-04-2016 MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 Gene3D G3DSA:3.40.50.300 2 226 3.8E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01355 96e6125f86ef528620529baa4a2a39f5 303 PANTHER PTHR24220:SF305 8 227 1.6E-100 T 23-04-2016 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PANTHER PTHR10264:SF80 1 286 3.3E-93 T 23-04-2016 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 SMART SM00244 20 184 2.6E-40 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PIRSF PIRSF005651 1 290 8.5E-100 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PANTHER PTHR10264 1 286 3.3E-93 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 TIGRFAM TIGR01932 hflC: HflC protein 146 283 2.1E-51 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PRINTS PR00721 Stomatin signature 76 97 8.3E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PRINTS PR00721 Stomatin signature 179 200 8.3E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PRINTS PR00721 Stomatin signature 160 178 8.3E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 PRINTS PR00721 Stomatin signature 27 49 8.3E-10 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 SUPERFAMILY SSF117892 52 190 3.14E-32 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS08560 8debc2c3b06d712853a3fc988d1dbe26 290 Pfam PF01145 SPFH domain / Band 7 family 24 199 6.4E-32 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 88 168 2.2E-24 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 SUPERFAMILY SSF53155 23 93 7.45E-7 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 90 169 1.1E-25 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 136 142 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 PANTHER PTHR10815:SF5 9 169 1.0E-35 T 23-04-2016 MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 Gene3D G3DSA:1.10.10.10 87 169 1.5E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 PANTHER PTHR10815 9 169 1.0E-35 T 23-04-2016 MSIP34_RS12020 8dd7892bb0a6af0c67561fd8a63849a7 171 SUPERFAMILY SSF46767 87 169 4.45E-24 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 28 157 3.7E-39 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 Gene3D G3DSA:3.30.420.140 25 160 7.1E-46 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 Pfam PF03652 Holliday junction resolvase 26 157 1.5E-41 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 PANTHER PTHR33317 25 160 1.0E-39 T 23-04-2016 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 25 160 23.922 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 SUPERFAMILY SSF53098 26 158 3.03E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS03190 994918b44099a8805b70f50187f33464 172 SMART SM00732 25 125 1.9E-28 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 MSIP34_RS05045 d969481aa2b2f8cd89794b705feaae83 275 PANTHER PTHR35811 1 269 6.8E-58 T 23-04-2016 MSIP34_RS05045 d969481aa2b2f8cd89794b705feaae83 275 PANTHER PTHR35811:SF1 1 269 6.8E-58 T 23-04-2016 MSIP34_RS05045 d969481aa2b2f8cd89794b705feaae83 275 Gene3D G3DSA:3.40.50.1010 4 146 5.9E-30 T 23-04-2016 IPR029060 PIN domain-like MSIP34_RS05045 d969481aa2b2f8cd89794b705feaae83 275 Pfam PF12872 OST-HTH/LOTUS domain 203 265 1.4E-12 T 23-04-2016 IPR025605 OST-HTH/LOTUS domain MSIP34_RS05045 d969481aa2b2f8cd89794b705feaae83 275 Pfam PF01936 NYN domain 9 146 1.9E-33 T 23-04-2016 IPR021139 NYN domain, limkain-b1-type MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 Pfam PF02310 B12 binding domain 180 272 8.0E-8 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 SUPERFAMILY SSF46955 9 76 2.29E-15 T 23-04-2016 IPR009061 Putative DNA-binding domain MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 PANTHER PTHR30204:SF19 3 161 5.9E-29 T 23-04-2016 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 Gene3D G3DSA:3.40.50.280 179 279 6.3E-12 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 Gene3D G3DSA:1.10.1660.10 9 79 3.6E-14 T 23-04-2016 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 PANTHER PTHR30204 3 161 5.9E-29 T 23-04-2016 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 Pfam PF13411 MerR HTH family regulatory protein 9 71 3.9E-15 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 Pfam PF02607 B12 binding domain 95 163 1.3E-7 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 SMART SM00422 9 79 3.8E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MSIP34_RS06665 380260109cc557259e1c7a63bccc978b 309 SUPERFAMILY SSF52242 174 279 8.79E-14 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 Pfam PF13438 Domain of unknown function (DUF4113) 374 421 1.3E-18 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 Pfam PF00817 impB/mucB/samB family 8 151 1.6E-34 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 Gene3D G3DSA:1.10.150.20 173 242 1.8E-18 T 23-04-2016 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 SUPERFAMILY SSF56672 3 240 2.49E-69 T 23-04-2016 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 Gene3D G3DSA:3.30.70.270 71 157 2.3E-23 T 23-04-2016 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 PANTHER PTHR11076:SF40 5 407 5.0E-162 T 23-04-2016 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 Gene3D G3DSA:3.30.1490.100 252 358 5.3E-4 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 PANTHER PTHR11076 5 407 5.0E-162 T 23-04-2016 MSIP34_RS08155 1ec14715459baca4f5afd2fb758b5d23 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 359 2.0E-11 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 Gene3D G3DSA:2.40.128.20 12 181 2.9E-38 T 23-04-2016 IPR012674 Calycin MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 ProSitePatterns PS00213 Lipocalin signature. 38 51 - T 23-04-2016 IPR022272 Lipocalin family conserved site MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 PRINTS PR01171 Bacterial lipocalin signature 39 53 6.0E-5 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 PRINTS PR01171 Bacterial lipocalin signature 127 135 6.0E-5 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 PRINTS PR01171 Bacterial lipocalin signature 142 153 6.0E-5 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 PANTHER PTHR10612 11 187 1.7E-22 T 23-04-2016 MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 Pfam PF08212 Lipocalin-like domain 39 180 6.0E-38 T 23-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 SUPERFAMILY SSF50814 18 180 3.43E-35 T 23-04-2016 IPR011038 Calycin-like MSIP34_RS06640 fd31fd3c7cd2ddeedfaadaea487e6396 192 PIRSF PIRSF036893 6 190 9.5E-38 T 23-04-2016 IPR022271 Lipocalin, ApoD type MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.588 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 Pfam PF01192 RNA polymerase Rpb6 8 60 1.3E-15 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 SMART SM01409 8 62 7.5E-16 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 SUPERFAMILY SSF63562 1 67 1.44E-21 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 5.4E-20 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 Gene3D G3DSA:3.90.940.10 1 66 2.6E-14 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS00260 d37fb35364f0ae541fbf76fd267b0930 70 PANTHER PTHR34476 2 67 1.8E-18 T 23-04-2016 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 PANTHER PTHR23105 16 226 9.2E-75 T 23-04-2016 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 SUPERFAMILY SSF56808 3 222 5.76E-81 T 23-04-2016 IPR023674 Ribosomal protein L1-like MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 Gene3D G3DSA:3.40.50.790 66 156 2.7E-40 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 ProSitePatterns PS01199 Ribosomal protein L1 signature. 118 136 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 Gene3D G3DSA:3.30.190.20 13 65 3.5E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 Gene3D G3DSA:3.30.190.20 158 223 3.5E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 PIRSF PIRSF002155 1 224 2.7E-74 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 226 42.439 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 Pfam PF00687 Ribosomal protein L1p/L10e family 28 216 9.2E-50 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 225 6.8E-101 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01530 ecef9f1eb9938dc55158f605079bbf6d 227 PANTHER PTHR23105:SF5 16 226 9.2E-75 T 23-04-2016 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 SUPERFAMILY SSF53383 21 385 6.88E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 PANTHER PTHR11808 5 384 1.0E-208 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 Gene3D G3DSA:3.90.1150.10 256 384 2.1E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 PANTHER PTHR11808:SF36 5 384 1.0E-208 T 23-04-2016 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 8 384 4.6E-182 T 23-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 384 2.1E-139 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 PIRSF PIRSF001434 1 385 5.2E-129 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07830 fa8251262c223c41c8889b065ec258e9 389 Gene3D G3DSA:3.40.640.10 7 255 1.7E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS12270 f04aef74cb151534e8279ddb97ca81d7 258 SMART SM00014 128 238 9.0E-12 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS12270 f04aef74cb151534e8279ddb97ca81d7 258 Pfam PF01569 PAP2 superfamily 130 244 1.4E-17 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS12270 f04aef74cb151534e8279ddb97ca81d7 258 Gene3D G3DSA:1.20.144.10 67 245 4.5E-29 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS12270 f04aef74cb151534e8279ddb97ca81d7 258 PANTHER PTHR14969 72 243 6.4E-22 T 23-04-2016 MSIP34_RS12270 f04aef74cb151534e8279ddb97ca81d7 258 SUPERFAMILY SSF48317 49 253 3.66E-33 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 Pfam PF02357 Transcription termination factor nusG 3 108 1.6E-25 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 Gene3D G3DSA:3.30.70.940 3 113 1.5E-42 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 SUPERFAMILY SSF82679 3 114 5.89E-38 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 SMART SM00738 2 111 4.9E-45 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 Gene3D G3DSA:2.30.30.30 117 176 3.5E-29 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 SMART SM00739 123 150 9.1E-7 T 23-04-2016 IPR005824 KOW MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 3.9E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.9E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 3.9E-19 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 Pfam PF00467 KOW motif 126 160 4.6E-7 T 23-04-2016 IPR005824 KOW MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 3.9E-68 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 SUPERFAMILY SSF50104 121 176 8.17E-19 T 23-04-2016 IPR008991 Translation protein SH3-like domain MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 PANTHER PTHR30265 1 176 1.8E-76 T 23-04-2016 MSIP34_RS01520 7e38d7cc0e986e257206cf3cbb58b1d6 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.48 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 SMART SM00760 377 446 8.8E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Gene3D G3DSA:1.10.8.60 300 367 1.8E-27 T 23-04-2016 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 466 2.5E-174 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 SMART SM00382 166 296 1.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Gene3D G3DSA:1.10.1750.10 368 468 6.1E-40 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Pfam PF00308 Bacterial dnaA protein 134 351 4.5E-90 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Pfam PF11638 DnaA N-terminal domain 3 63 2.5E-18 T 23-04-2016 IPR024633 DnaA N-terminal domain MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Gene3D G3DSA:3.40.50.300 121 298 9.0E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 379 446 1.1E-30 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 SUPERFAMILY SSF52540 136 346 1.37E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 SUPERFAMILY SSF48295 365 468 1.7E-37 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 ProSitePatterns PS01008 DnaA protein signature. 427 446 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PANTHER PTHR30050 1 100 3.7E-200 T 23-04-2016 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PANTHER PTHR30050 132 469 3.7E-200 T 23-04-2016 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PANTHER PTHR30050:SF2 1 100 3.7E-200 T 23-04-2016 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PANTHER PTHR30050:SF2 132 469 3.7E-200 T 23-04-2016 MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 245 1.4E-46 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 427 446 1.4E-46 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 199 213 1.4E-46 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 167 187 1.4E-46 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 265 292 1.4E-46 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like MSIP34_RS00005 f066bc5ceb0b66a0a172881f74e953cb 469 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 468 32.073 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 Gene3D G3DSA:2.60.120.10 23 98 2.1E-14 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 Pfam PF02311 AraC-like ligand binding domain 29 157 6.9E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 Gene3D G3DSA:1.10.10.60 162 219 1.5E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 Gene3D G3DSA:1.10.10.60 223 267 3.8E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 SUPERFAMILY SSF51182 17 205 2.56E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 SUPERFAMILY SSF46689 223 267 5.73E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 PANTHER PTHR11019 18 270 8.2E-81 T 23-04-2016 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 SMART SM00342 183 265 3.3E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 Pfam PF12833 Helix-turn-helix domain 189 267 2.8E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13770 c18cc9bcce57be82fff915ec280bc92a 271 PANTHER PTHR11019:SF99 18 270 8.2E-81 T 23-04-2016 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 PANTHER PTHR11935 1 250 3.1E-88 T 23-04-2016 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 PANTHER PTHR11935:SF7 1 250 3.1E-88 T 23-04-2016 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 250 2.1E-102 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 PIRSF PIRSF005457 1 250 1.9E-101 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 250 4.6E-25 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 SMART SM00849 12 166 1.9E-34 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 7.0E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 SUPERFAMILY SSF56281 4 250 9.83E-69 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 250 43.174 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS07375 f240dd67c4d77d2cb5a20044dd277e94 250 Gene3D G3DSA:3.60.15.10 5 250 5.3E-85 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS10840 13934f3514a33c8c6c8c1a72d924949a 289 PANTHER PTHR33121:SF13 47 276 2.7E-30 T 23-04-2016 MSIP34_RS10840 13934f3514a33c8c6c8c1a72d924949a 289 Pfam PF00563 EAL domain 47 269 4.5E-41 T 23-04-2016 IPR001633 EAL domain MSIP34_RS10840 13934f3514a33c8c6c8c1a72d924949a 289 Gene3D G3DSA:3.20.20.450 47 276 3.0E-45 T 23-04-2016 IPR001633 EAL domain MSIP34_RS10840 13934f3514a33c8c6c8c1a72d924949a 289 SMART SM00052 32 274 2.1E-12 T 23-04-2016 IPR001633 EAL domain MSIP34_RS10840 13934f3514a33c8c6c8c1a72d924949a 289 PANTHER PTHR33121 47 276 2.7E-30 T 23-04-2016 MSIP34_RS10840 13934f3514a33c8c6c8c1a72d924949a 289 SUPERFAMILY SSF141868 47 276 3.01E-51 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13470 be553295354190179968618ca2e3521d 76 TIGRFAM TIGR03510 XapX: XapX domain 4 48 1.3E-14 T 23-04-2016 IPR020017 XapX domain MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Pfam PF02321 Outer membrane efflux protein 292 473 4.5E-30 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Pfam PF02321 Outer membrane efflux protein 62 264 1.0E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 SUPERFAMILY SSF56954 2 477 6.41E-111 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 475 1.6E-123 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 PANTHER PTHR30203 5 478 5.6E-179 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 PANTHER PTHR30203:SF15 5 478 5.6E-179 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Gene3D G3DSA:2.20.200.10 325 360 2.7E-21 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Gene3D G3DSA:2.20.200.10 105 151 2.7E-21 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Gene3D G3DSA:1.20.1600.10 50 88 4.8E-103 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Gene3D G3DSA:1.20.1600.10 152 324 4.8E-103 T 23-04-2016 MSIP34_RS05900 55782e47518d91d4e6d2d240da347019 484 Gene3D G3DSA:1.20.1600.10 362 476 4.8E-103 T 23-04-2016 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 3.2E-74 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 Pfam PF00977 Histidine biosynthesis protein 3 232 6.9E-77 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 SUPERFAMILY SSF51366 1 239 9.42E-72 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 PANTHER PTHR21235:SF15 1 243 2.6E-95 T 23-04-2016 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 35.43 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 Gene3D G3DSA:3.20.20.70 1 240 3.0E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS01410 6321d5e9cada5ca88fab010ad8b07588 246 PANTHER PTHR21235 1 243 2.6E-95 T 23-04-2016 MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 Pfam PF13641 Glycosyltransferase like family 2 60 222 2.8E-8 T 23-04-2016 MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 SUPERFAMILY SSF53448 3 248 2.74E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 PANTHER PTHR22916 157 244 4.1E-41 T 23-04-2016 MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 PANTHER PTHR22916 1 141 4.1E-41 T 23-04-2016 MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 Gene3D G3DSA:3.90.550.10 5 244 1.9E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 PANTHER PTHR22916:SF16 157 244 4.1E-41 T 23-04-2016 MSIP34_RS00670 203392aab70cbb10163cf8aa2bb63d29 255 PANTHER PTHR22916:SF16 1 141 4.1E-41 T 23-04-2016 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 167 185 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 158 176 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 40 58 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 285 303 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 385 403 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 744 762 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 394 412 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 523 541 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 58 76 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 654 672 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 541 559 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 532 550 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 49 67 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 276 294 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 185 203 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 739 760 3.1E-5 T 23-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 63 81 3.1E-5 T 23-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 319 419 6.02E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 PRINTS PR00313 NodO calcium binding signature 189 197 1.6E-9 T 23-04-2016 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 PRINTS PR00313 NodO calcium binding signature 50 61 1.6E-9 T 23-04-2016 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 PRINTS PR00313 NodO calcium binding signature 298 307 1.6E-9 T 23-04-2016 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 PRINTS PR00313 NodO calcium binding signature 171 179 1.6E-9 T 23-04-2016 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 4 114 1.96E-20 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 170 187 0.022 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 439 451 54.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 544 560 0.012 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 730 746 0.064 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 658 673 0.018 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 271 287 0.0035 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 152 169 0.011 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 380 396 0.011 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 42 0.081 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 397 413 0.35 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 62 77 0.038 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 189 204 0.89 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 747 764 0.24 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 527 543 0.015 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 640 656 5.3 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 362 377 65.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 44 60 0.31 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 289 304 0.089 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 242 345 1.19E-15 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 720 850 2.22E-21 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 440 613 2.62E-18 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 583 699 6.15E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Gene3D G3DSA:2.150.10.10 449 609 8.1E-21 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Gene3D G3DSA:2.150.10.10 132 227 1.2E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Gene3D G3DSA:2.150.10.10 630 825 1.7E-24 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Gene3D G3DSA:2.150.10.10 245 341 3.2E-16 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Gene3D G3DSA:2.150.10.10 360 448 2.2E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 Gene3D G3DSA:2.150.10.10 4 104 1.1E-18 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS03545 5f5bef81f3acef34bce0017bcf222fea 863 SUPERFAMILY SSF51120 126 225 1.83E-18 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 PANTHER PTHR11751 128 151 5.8E-21 T 23-04-2016 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 PANTHER PTHR11751 16 82 5.8E-21 T 23-04-2016 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 Gene3D G3DSA:3.40.1410.10 77 241 1.9E-38 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 Gene3D G3DSA:1.10.10.10 10 76 8.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 2.0E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 2.0E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 SUPERFAMILY SSF64288 69 241 1.57E-38 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 Pfam PF07702 UTRA domain 101 238 1.7E-25 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 PANTHER PTHR11751:SF333 128 151 5.8E-21 T 23-04-2016 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 SMART SM00866 100 238 8.3E-20 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 PANTHER PTHR11751:SF333 16 82 5.8E-21 T 23-04-2016 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 SUPERFAMILY SSF46785 12 83 8.06E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 SMART SM00345 20 79 1.7E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS13260 9cfaea226addb7d3efab8dd40f5d0e76 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 6.9E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 SUPERFAMILY SSF53187 185 498 1.79E-128 T 23-04-2016 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 145 9.7E-29 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 Gene3D G3DSA:3.40.630.10 176 498 2.7E-146 T 23-04-2016 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 SUPERFAMILY SSF52949 1 189 3.94E-42 T 23-04-2016 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 352 359 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PANTHER PTHR11963 8 499 2.0E-224 T 23-04-2016 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 Gene3D G3DSA:3.40.220.10 1 154 4.2E-54 T 23-04-2016 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PRINTS PR00481 Cytosol aminopeptidase signature 267 284 2.3E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PRINTS PR00481 Cytosol aminopeptidase signature 326 347 2.3E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PRINTS PR00481 Cytosol aminopeptidase signature 289 310 2.3E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PRINTS PR00481 Cytosol aminopeptidase signature 348 368 2.3E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PRINTS PR00481 Cytosol aminopeptidase signature 376 391 2.3E-55 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 500 39.663 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 191 491 9.8E-127 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MSIP34_RS01250 02f9884c14b3d6a8d6f5f8cfb94d225a 501 PANTHER PTHR11963:SF13 8 499 2.0E-224 T 23-04-2016 MSIP34_RS09545 3682f308e03b1b42f33b4f627a9496eb 306 SUPERFAMILY SSF141371 87 189 8.63E-13 T 23-04-2016 MSIP34_RS09545 3682f308e03b1b42f33b4f627a9496eb 306 Gene3D G3DSA:2.30.110.10 86 188 5.1E-8 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS09545 3682f308e03b1b42f33b4f627a9496eb 306 Pfam PF07238 PilZ domain 188 298 6.6E-9 T 23-04-2016 IPR009875 PilZ domain GO:0035438 MSIP34_RS09545 3682f308e03b1b42f33b4f627a9496eb 306 SUPERFAMILY SSF141371 191 302 5.49E-7 T 23-04-2016 MSIP34_RS09545 3682f308e03b1b42f33b4f627a9496eb 306 Gene3D G3DSA:2.40.10.220 189 298 1.2E-5 T 23-04-2016 MSIP34_RS09545 3682f308e03b1b42f33b4f627a9496eb 306 Pfam PF12945 Flagellar protein YcgR 95 179 1.4E-14 T 23-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 13 231 1.1E-57 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 SMART SM00934 11 231 1.8E-97 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 SUPERFAMILY SSF51366 9 234 2.03E-73 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 Gene3D G3DSA:3.20.20.70 9 235 5.1E-88 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 63 76 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 PANTHER PTHR32119:SF2 1 235 4.4E-108 T 23-04-2016 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 PANTHER PTHR32119 1 235 4.4E-108 T 23-04-2016 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 230 3.6E-50 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS05615 7620b1b5fd35b4f2588bd83740ac5e9b 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 9 236 39.814 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 PANTHER PTHR32108:SF0 1 327 9.3E-132 T 23-04-2016 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 SUPERFAMILY SSF56553 53 176 1.96E-39 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 SMART SM00662 23 232 6.7E-93 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 SUPERFAMILY SSF55257 8 53 7.26E-29 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 SUPERFAMILY SSF55257 177 231 7.26E-29 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 34.676 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 324 1.0E-33 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 5.1E-23 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 SUPERFAMILY SSF47789 249 321 2.88E-26 T 23-04-2016 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Gene3D G3DSA:1.10.150.20 244 321 9.9E-35 T 23-04-2016 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Gene3D G3DSA:2.170.120.12 53 175 2.7E-38 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 PANTHER PTHR32108 1 327 9.3E-132 T 23-04-2016 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 314 4.6E-106 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 249 306 2.2E-23 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 153 3.8E-22 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Gene3D G3DSA:3.30.1360.10 176 229 1.2E-32 T 23-04-2016 MSIP34_RS01705 1ba5ef2ad12b866921a8d73ad33fc4cc 327 Gene3D G3DSA:3.30.1360.10 14 51 1.2E-32 T 23-04-2016 MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 Gene3D G3DSA:1.10.1200.10 3 76 4.0E-35 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 77 0.002 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.384 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 SUPERFAMILY SSF47336 1 77 1.96E-23 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 7.6E-36 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 4.3E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS07045 dad009dbe708fbd769274556c234696d 78 PANTHER PTHR20863 3 73 1.4E-29 T 23-04-2016 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 SUPERFAMILY SSF53850 88 299 3.82E-42 T 23-04-2016 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 Gene3D G3DSA:1.10.10.10 1 81 1.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 SUPERFAMILY SSF46785 1 86 2.58E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.5E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 Gene3D G3DSA:3.40.190.10 184 261 3.0E-23 T 23-04-2016 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 PANTHER PTHR30126 1 309 2.9E-149 T 23-04-2016 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 Gene3D G3DSA:3.40.190.10 90 183 2.3E-23 T 23-04-2016 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 PANTHER PTHR30126:SF6 1 309 2.9E-149 T 23-04-2016 MSIP34_RS07715 41191e275ea514a6595ba4b80cc9dfe4 311 Pfam PF03466 LysR substrate binding domain 89 294 2.4E-41 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 338 6.9E-132 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 Gene3D G3DSA:3.40.1780.10 177 338 3.4E-101 T 23-04-2016 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 Gene3D G3DSA:3.40.1780.10 1 62 3.4E-101 T 23-04-2016 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 339 46.911 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 PANTHER PTHR30307:SF0 2 345 1.5E-168 T 23-04-2016 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 Pfam PF02547 Queuosine biosynthesis protein 4 338 6.4E-133 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 PANTHER PTHR30307 2 345 1.5E-168 T 23-04-2016 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 Gene3D G3DSA:2.40.10.240 64 140 6.6E-17 T 23-04-2016 MSIP34_RS11455 0f050ee954489d45d5d4a70ab3efd34d 351 SUPERFAMILY SSF111337 4 338 1.26E-135 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 Pfam PF07715 TonB-dependent Receptor Plug Domain 191 290 9.9E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 SMART SM00965 88 139 5.9E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 PANTHER PTHR32552:SF37 183 849 2.4E-173 T 23-04-2016 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 PANTHER PTHR32552:SF37 131 159 2.4E-173 T 23-04-2016 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 Pfam PF00593 TonB dependent receptor 599 839 2.3E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 SUPERFAMILY SSF56935 145 849 2.04E-118 T 23-04-2016 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 PANTHER PTHR32552 183 849 2.4E-173 T 23-04-2016 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 PANTHER PTHR32552 131 159 2.4E-173 T 23-04-2016 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 Gene3D G3DSA:2.170.130.10 170 297 2.5E-31 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 193 849 3.6E-107 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS04100 175958e28158045aba88210a084d8b2d 849 Gene3D G3DSA:2.40.170.20 305 849 2.5E-120 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 Gene3D G3DSA:3.90.1030.10 1 117 2.6E-51 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 Pfam PF01196 Ribosomal protein L17 20 116 3.4E-35 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.7E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.256 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 SUPERFAMILY SSF64263 1 119 2.09E-51 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01710 f7103c0a8722625cd9ef8abd48635a98 129 PANTHER PTHR14413 1 119 8.0E-67 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS04810 23fc629e97acbc2e11d44c4e815de415 316 Gene3D G3DSA:3.40.190.10 119 214 9.7E-17 T 23-04-2016 MSIP34_RS04810 23fc629e97acbc2e11d44c4e815de415 316 Gene3D G3DSA:3.40.190.10 36 118 3.1E-5 T 23-04-2016 MSIP34_RS04810 23fc629e97acbc2e11d44c4e815de415 316 PANTHER PTHR30024:SF8 1 273 3.4E-41 T 23-04-2016 MSIP34_RS04810 23fc629e97acbc2e11d44c4e815de415 316 PANTHER PTHR30024 1 273 3.4E-41 T 23-04-2016 MSIP34_RS04810 23fc629e97acbc2e11d44c4e815de415 316 SUPERFAMILY SSF53850 19 232 2.53E-40 T 23-04-2016 MSIP34_RS04810 23fc629e97acbc2e11d44c4e815de415 316 Pfam PF09084 NMT1/THI5 like 35 230 9.2E-20 T 23-04-2016 IPR015168 SsuA/THI5-like MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 PANTHER PTHR33619:SF1 21 322 1.3E-33 T 23-04-2016 MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Gene3D G3DSA:3.10.560.10 190 272 2.2E-15 T 23-04-2016 MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Gene3D G3DSA:3.10.560.10 277 347 1.0E-10 T 23-04-2016 MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Gene3D G3DSA:3.10.560.10 98 186 6.8E-12 T 23-04-2016 MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Gene3D G3DSA:3.30.1950.10 31 97 2.1E-15 T 23-04-2016 MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Pfam PF10531 SLBB domain 191 231 1.7E-7 T 23-04-2016 IPR019554 Soluble ligand binding domain MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Pfam PF10531 SLBB domain 276 327 1.6E-13 T 23-04-2016 IPR019554 Soluble ligand binding domain MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Pfam PF10531 SLBB domain 105 148 9.6E-4 T 23-04-2016 IPR019554 Soluble ligand binding domain MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 Pfam PF02563 Polysaccharide biosynthesis/export protein 25 98 6.0E-18 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 MSIP34_RS09290 16350561aa0baca6d34fa4e209aa749e 351 PANTHER PTHR33619 21 322 1.3E-33 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Gene3D G3DSA:1.10.3850.10 817 1030 4.7E-58 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Gene3D G3DSA:1.10.3850.10 279 499 1.6E-61 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.3E-114 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82866 296 497 1.7E-49 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82866 841 1028 9.42E-46 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Gene3D G3DSA:3.30.70.1430 570 672 1.3E-37 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82693 568 672 1.26E-32 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PANTHER PTHR32063 1 1030 0.0 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82714 725 811 1.27E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Gene3D G3DSA:3.30.70.1430 38 140 3.1E-36 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82693 38 133 5.75E-28 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 PANTHER PTHR32063:SF13 1 1030 0.0 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Gene3D G3DSA:3.30.2090.10 724 813 2.0E-26 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 Gene3D G3DSA:3.30.2090.10 181 275 1.1E-28 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82714 182 271 1.31E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82693 274 330 2.35E-28 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82693 675 724 1.02E-30 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82693 811 859 1.02E-30 T 23-04-2016 MSIP34_RS13395 a3a7f173bb8c06a8c7f293e535de0e5d 1043 SUPERFAMILY SSF82693 135 182 2.35E-28 T 23-04-2016 MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 PANTHER PTHR30446 1 199 8.8E-100 T 23-04-2016 MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 SMART SM00493 80 165 8.8E-13 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 PANTHER PTHR30446:SF0 1 199 8.8E-100 T 23-04-2016 MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 98.341 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 Pfam PF02132 RecR protein 40 78 2.5E-11 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 Pfam PF13662 Toprim domain 82 171 2.7E-23 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 SUPERFAMILY SSF111304 2 198 1.96E-73 T 23-04-2016 IPR023627 Recombination protein RecR MSIP34_RS08500 d875c7e6b6e4dad42a8825eded1888a5 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 196 4.4E-73 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PANTHER PTHR11702 1 344 7.9E-160 T 23-04-2016 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 SUPERFAMILY SSF82051 2 158 9.42E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PANTHER PTHR11702:SF3 1 344 7.9E-160 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PIRSF PIRSF002401 1 348 8.6E-135 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 Hamap MF_01454 GTPase Obg [obg]. 2 332 47.86 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 Gene3D G3DSA:2.70.210.12 2 156 2.4E-58 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 Pfam PF01926 50S ribosome-binding GTPase 161 285 9.9E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.6E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 Gene3D G3DSA:3.40.50.300 160 343 6.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 6.4E-143 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 Pfam PF01018 GTP1/OBG 3 158 2.3E-59 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 MSIP34_RS02620 9ffed33578d3104e42a64bada21ef54a 350 SUPERFAMILY SSF52540 152 335 2.35E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 SUPERFAMILY SSF63380 1 91 2.21E-19 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 Gene3D G3DSA:2.40.30.20 103 195 2.0E-33 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 Gene3D G3DSA:2.40.30.20 5 102 2.8E-26 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 193 8.8E-59 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 SUPERFAMILY SSF63380 91 194 4.08E-35 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 PANTHER PTHR21098 1 191 1.7E-85 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 PIRSF PIRSF000498 1 201 1.8E-70 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 Pfam PF00677 Lumazine binding domain 3 85 3.3E-15 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS03205 c11ce1d6127fc50267d027c57cc1e217 201 Pfam PF00677 Lumazine binding domain 98 182 4.3E-22 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 325 1.4E-136 T 23-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 PANTHER PTHR28629 1 329 2.0E-154 T 23-04-2016 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 Pfam PF02733 Dak1 domain 17 323 3.8E-122 T 23-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 Gene3D G3DSA:3.30.1180.20 181 328 5.4E-55 T 23-04-2016 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 SUPERFAMILY SSF82549 11 328 2.14E-114 T 23-04-2016 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 Gene3D G3DSA:3.40.50.10440 12 179 1.2E-63 T 23-04-2016 MSIP34_RS05810 eb514bc05339a02c091fd56322d0f371 329 PANTHER PTHR28629:SF2 1 329 2.0E-154 T 23-04-2016 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 PANTHER PTHR26402 1 221 2.1E-104 T 23-04-2016 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 2.9E-108 T 23-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.7E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 Gene3D G3DSA:1.10.10.10 123 222 3.5E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 SMART SM00862 145 220 7.5E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 PANTHER PTHR26402:SF575 1 221 2.1E-104 T 23-04-2016 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 SMART SM00448 1 112 1.1E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 SUPERFAMILY SSF52172 1 178 2.25E-39 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 Pfam PF00072 Response regulator receiver domain 3 113 4.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS02040 6a18c86d27a87c7824543f311d704ff1 226 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-38 T 23-04-2016 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 PIRSF PIRSF002465 1 337 1.5E-133 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 Gene3D G3DSA:3.40.718.10 3 331 2.0E-140 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 160.262 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 PANTHER PTHR30100:SF1 1 340 2.8E-141 T 23-04-2016 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 Pfam PF02504 Fatty acid synthesis protein 4 325 2.0E-111 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 SUPERFAMILY SSF53659 3 331 4.52E-110 T 23-04-2016 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 332 1.7E-113 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 MSIP34_RS07065 dec17b368d4ecc4ea66f65f1c273b0b9 352 PANTHER PTHR30100 1 340 2.8E-141 T 23-04-2016 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 527 9.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 527 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 2.2E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 Gene3D G3DSA:3.30.565.10 367 527 1.2E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 Gene3D G3DSA:3.30.450.20 204 300 2.4E-7 T 23-04-2016 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PANTHER PTHR24423:SF483 199 526 2.3E-68 T 23-04-2016 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PANTHER PTHR24423:SF483 1 9 2.3E-68 T 23-04-2016 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PANTHER PTHR24423 199 526 2.3E-68 T 23-04-2016 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 PANTHER PTHR24423 1 9 2.3E-68 T 23-04-2016 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 SMART SM00387 422 529 1.1E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 SUPERFAMILY SSF47384 306 378 3.14E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 SMART SM00388 315 380 7.4E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 Pfam PF13188 PAS domain 206 258 6.2E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 Gene3D G3DSA:1.10.287.130 313 366 2.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 2.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01210 14eaa2efa43728adfeb2e9a6473c6881 529 SUPERFAMILY SSF55874 384 526 9.3E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02770 8436ec10a502e41d18e6f297f402dbf4 131 PANTHER PTHR33204 13 129 7.4E-64 T 23-04-2016 MSIP34_RS02770 8436ec10a502e41d18e6f297f402dbf4 131 Pfam PF01638 HxlR-like helix-turn-helix 35 121 3.1E-28 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type MSIP34_RS02770 8436ec10a502e41d18e6f297f402dbf4 131 Gene3D G3DSA:1.10.10.10 10 128 6.8E-45 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02770 8436ec10a502e41d18e6f297f402dbf4 131 PANTHER PTHR33204:SF7 13 129 7.4E-64 T 23-04-2016 MSIP34_RS02770 8436ec10a502e41d18e6f297f402dbf4 131 SUPERFAMILY SSF46785 16 125 3.17E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 PANTHER PTHR40279:SF2 6 227 4.3E-108 T 23-04-2016 MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 PANTHER PTHR40279 6 227 4.3E-108 T 23-04-2016 MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 SUPERFAMILY SSF48613 2 227 4.67E-71 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 243 121.291 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 228 5.7E-104 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 Gene3D G3DSA:1.20.910.10 2 230 9.8E-108 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS07775 d966af73ee05025e50a05b5cd9893efa 243 Pfam PF03070 TENA/THI-4/PQQC family 12 219 6.7E-56 T 23-04-2016 IPR004305 Thiaminase-2/PQQC MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 132 21.616 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 Gene3D G3DSA:1.20.5.440 93 135 2.0E-16 T 23-04-2016 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 SUPERFAMILY SSF51344 4 87 4.58E-23 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 91 1.0E-37 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 Gene3D G3DSA:2.60.15.10 4 92 3.5E-29 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 PANTHER PTHR13822 1 138 5.9E-44 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 134 1.7E-41 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 90 134 1.3E-10 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 85 5.3E-28 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14105 0ed2a571fe6c8da28c11fd3a457239cb 141 SUPERFAMILY SSF46604 89 138 2.12E-13 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 PANTHER PTHR11895:SF7 1 484 1.3E-223 T 23-04-2016 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 11 478 7.3E-188 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 478 94.046 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 Pfam PF01425 Amidase 22 467 3.0E-158 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 PANTHER PTHR11895 1 484 1.3E-223 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 Gene3D G3DSA:3.90.1300.10 3 484 4.6E-184 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 SUPERFAMILY SSF75304 3 484 2.88E-166 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS12730 733f341ac537cd9b5727f52fde996b4f 487 ProSitePatterns PS00571 Amidases signature. 149 180 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS07465 4aa37533ce4772c6676bee73aaeb6937 271 Gene3D G3DSA:3.30.420.10 98 257 1.6E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07465 4aa37533ce4772c6676bee73aaeb6937 271 Pfam PF00665 Integrase core domain 105 218 1.6E-31 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 MSIP34_RS07465 4aa37533ce4772c6676bee73aaeb6937 271 SUPERFAMILY SSF53098 97 262 2.02E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07465 4aa37533ce4772c6676bee73aaeb6937 271 Pfam PF13276 HTH-like domain 24 80 1.4E-15 T 23-04-2016 IPR025948 HTH-like domain MSIP34_RS07465 4aa37533ce4772c6676bee73aaeb6937 271 PANTHER PTHR32552 1 266 5.8E-72 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 PANTHER PTHR30203 8 474 4.3E-97 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Gene3D G3DSA:1.20.1600.10 60 96 2.1E-100 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Gene3D G3DSA:1.20.1600.10 140 310 2.1E-100 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Gene3D G3DSA:1.20.1600.10 352 466 2.1E-100 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Gene3D G3DSA:2.20.200.10 311 349 3.6E-11 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Gene3D G3DSA:2.20.200.10 123 139 3.6E-11 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 SUPERFAMILY SSF56954 61 467 6.15E-101 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 SUPERFAMILY SSF56954 2 34 6.15E-101 T 23-04-2016 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Pfam PF02321 Outer membrane efflux protein 277 446 1.2E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 Pfam PF02321 Outer membrane efflux protein 70 252 2.0E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 465 9.6E-108 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS12485 d0656425250be26ffea86af3a2a487ee 474 PANTHER PTHR30203:SF3 8 474 4.3E-97 T 23-04-2016 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 SUPERFAMILY SSF54292 211 310 9.96E-21 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 Gene3D G3DSA:3.40.50.80 105 216 1.1E-26 T 23-04-2016 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 Gene3D G3DSA:3.10.20.30 217 309 1.9E-21 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PANTHER PTHR19370 4 241 1.3E-62 T 23-04-2016 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 Pfam PF00970 Oxidoreductase FAD-binding domain 6 100 2.7E-7 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 Pfam PF00175 Oxidoreductase NAD-binding domain 114 201 2.9E-4 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 SUPERFAMILY SSF63380 3 101 2.67E-23 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 Gene3D G3DSA:2.40.30.10 3 101 7.6E-28 T 23-04-2016 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PANTHER PTHR19370:SF113 4 241 1.3E-62 T 23-04-2016 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 SUPERFAMILY SSF52343 109 225 1.19E-27 T 23-04-2016 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 236 308 4.9E-10 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 3.1E-29 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 189 197 3.1E-29 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 138 147 3.1E-29 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 77 91 3.1E-29 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 28 38 3.1E-29 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 MSIP34_RS12410 0693aa7929e5e5dd71d58f4496439c02 317 PRINTS PR00409 Phthalate dioxygenase reductase family signature 91 105 3.1E-29 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 MSIP34_RS09200 2aae3e8e398b72bf24877c8abcb37b25 299 PANTHER PTHR22572 8 295 4.4E-104 T 23-04-2016 MSIP34_RS09200 2aae3e8e398b72bf24877c8abcb37b25 299 PANTHER PTHR22572:SF14 8 295 4.4E-104 T 23-04-2016 MSIP34_RS09200 2aae3e8e398b72bf24877c8abcb37b25 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 267 5.1E-116 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 MSIP34_RS09200 2aae3e8e398b72bf24877c8abcb37b25 299 SUPERFAMILY SSF53448 4 271 4.51E-63 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09200 2aae3e8e398b72bf24877c8abcb37b25 299 Pfam PF00483 Nucleotidyl transferase 13 269 2.3E-28 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 MSIP34_RS09200 2aae3e8e398b72bf24877c8abcb37b25 299 Gene3D G3DSA:3.90.550.10 7 277 3.8E-67 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 367 7.6E-10 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 SUPERFAMILY SSF51984 1 90 1.14E-20 T 23-04-2016 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 PANTHER PTHR23135:SF17 1 455 1.8E-244 T 23-04-2016 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Gene3D G3DSA:3.90.190.20 321 455 3.8E-34 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Pfam PF01225 Mur ligase family, catalytic domain 2 99 3.1E-18 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 PANTHER PTHR23135 1 455 1.8E-244 T 23-04-2016 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 SUPERFAMILY SSF53623 95 317 2.22E-51 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Pfam PF08245 Mur ligase middle domain 108 299 1.7E-24 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 456 59.152 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 455 1.6E-225 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 SUPERFAMILY SSF53244 319 455 2.62E-37 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Gene3D G3DSA:3.40.50.720 1 90 1.3E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12960 2188f06e543579d67fa27a1ec131a442 457 Gene3D G3DSA:3.40.1190.10 92 320 6.7E-92 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02340 ea30ba9346dcb90537099c78ed15336b 387 PANTHER PTHR30474 1 380 5.7E-138 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 MSIP34_RS02340 ea30ba9346dcb90537099c78ed15336b 387 Pfam PF01098 Cell cycle protein 20 379 3.5E-100 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 MSIP34_RS02340 ea30ba9346dcb90537099c78ed15336b 387 PANTHER PTHR30474:SF2 1 380 5.7E-138 T 23-04-2016 MSIP34_RS02340 ea30ba9346dcb90537099c78ed15336b 387 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 18 377 1.7E-124 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 MSIP34_RS02340 ea30ba9346dcb90537099c78ed15336b 387 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 15 386 39.642 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 SUPERFAMILY SSF54768 10 78 1.36E-21 T 23-04-2016 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 165 6.0E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 Gene3D G3DSA:3.30.160.20 11 75 6.7E-26 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 165 33.882 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 159 1.9E-30 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 13 76 7.1E-25 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 SUPERFAMILY SSF54211 81 161 2.12E-27 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 30 62 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 PANTHER PTHR13718 11 167 2.6E-69 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01665 01c9984d2fb5476363c4ceaf30cc8cfa 168 Gene3D G3DSA:3.30.230.10 78 161 7.4E-33 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 PANTHER PTHR11647 1 319 5.3E-168 T 23-04-2016 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 PIRSF PIRSF001237 1 344 1.0E-140 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 6.6E-142 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 PANTHER PTHR11647:SF59 1 319 5.3E-168 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 SUPERFAMILY SSF51556 4 343 3.74E-148 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 43.471 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 Gene3D G3DSA:3.20.20.140 2 343 1.6E-137 T 23-04-2016 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11620 d51e342ff69ae60e3c9d44846cbcdeef 344 Pfam PF01979 Amidohydrolase family 12 310 1.4E-21 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 Gene3D G3DSA:1.10.560.10 369 518 1.6E-42 T 23-04-2016 IPR027413 GroEL-like equatorial domain MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 5.2E-101 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 PANTHER PTHR11353 2 547 1.4E-250 T 23-04-2016 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 SUPERFAMILY SSF54849 137 202 1.63E-23 T 23-04-2016 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 41.94 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 Gene3D G3DSA:1.10.560.10 4 187 7.5E-46 T 23-04-2016 IPR027413 GroEL-like equatorial domain MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.6E-256 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 SUPERFAMILY SSF48592 406 521 1.68E-77 T 23-04-2016 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 SUPERFAMILY SSF48592 7 134 1.68E-77 T 23-04-2016 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 SUPERFAMILY SSF52029 184 376 2.69E-84 T 23-04-2016 IPR027409 GroEL-like apical domain MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 MSIP34_RS02060 b4cb046aa14ef671b12abf3613b8fa18 547 Gene3D G3DSA:3.50.7.10 188 368 3.8E-99 T 23-04-2016 IPR027409 GroEL-like apical domain MSIP34_RS09035 9049bb03e6de23f66dab1cea4690076b 151 SUPERFAMILY SSF89069 1 66 4.32E-12 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 MSIP34_RS09035 9049bb03e6de23f66dab1cea4690076b 151 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 2 82 2.7E-17 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 PANTHER PTHR30332 286 604 1.8E-47 T 23-04-2016 MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 SMART SM00965 86 134 6.4E-4 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 287 573 3.1E-76 T 23-04-2016 IPR013358 Pilus biogenesis, MshL MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 PRINTS PR00811 Bacterial general secretion pathway protein D signature 321 331 9.0E-17 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 PRINTS PR00811 Bacterial general secretion pathway protein D signature 538 556 9.0E-17 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 412 9.0E-17 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 PRINTS PR00811 Bacterial general secretion pathway protein D signature 561 575 9.0E-17 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 Pfam PF07655 Secretin N-terminal domain 139 225 2.8E-5 T 23-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 MSIP34_RS00440 350e5984c280a35b6c84fc626f1bbfc7 604 Pfam PF00263 Bacterial type II and III secretion system protein 392 574 5.8E-36 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.4E-44 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 PANTHER PTHR33221:SF1 2 152 9.1E-55 T 23-04-2016 MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 Pfam PF02082 Transcriptional regulator 1 82 1.2E-27 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 PANTHER PTHR33221 2 152 9.1E-55 T 23-04-2016 MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 Gene3D G3DSA:1.10.10.10 1 136 1.5E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09340 c9cf459adfa9428cd9c96072bc57cd21 162 SUPERFAMILY SSF46785 2 132 2.42E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 PANTHER PTHR31793:SF9 6 144 1.2E-45 T 23-04-2016 MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 SUPERFAMILY SSF54637 9 140 6.31E-42 T 23-04-2016 IPR029069 HotDog domain MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 13 137 5.3E-50 T 23-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 Gene3D G3DSA:3.10.129.10 10 140 5.4E-47 T 23-04-2016 IPR029069 HotDog domain MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 PIRSF PIRSF003230 4 144 2.3E-45 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 PANTHER PTHR31793 6 144 1.2E-45 T 23-04-2016 MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 Pfam PF03061 Thioesterase superfamily 27 111 1.5E-20 T 23-04-2016 IPR006683 Thioesterase domain MSIP34_RS12085 00c4d1c451b2e010691fbf7ebafc9433 144 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 16 132 2.3E-38 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 SUPERFAMILY SSF49785 9 187 1.34E-39 T 23-04-2016 IPR008979 Galactose-binding domain-like MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Gene3D G3DSA:3.20.20.80 563 622 1.4E-49 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Gene3D G3DSA:3.20.20.80 313 519 1.4E-49 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 SUPERFAMILY SSF49303 197 303 4.32E-18 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Gene3D G3DSA:2.60.40.320 182 305 5.9E-16 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Gene3D G3DSA:2.60.120.260 12 181 9.4E-37 T 23-04-2016 IPR008979 Galactose-binding domain-like MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 PANTHER PTHR10066 160 692 6.8E-88 T 23-04-2016 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 PANTHER PTHR10066 1 142 6.8E-88 T 23-04-2016 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 66 137 2.7E-17 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 PRINTS PR00132 Glycosyl hydrolase family 2 signature 95 110 1.8E-5 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 PRINTS PR00132 Glycosyl hydrolase family 2 signature 411 426 1.8E-5 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 PRINTS PR00132 Glycosyl hydrolase family 2 signature 346 364 1.8E-5 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Pfam PF00703 Glycosyl hydrolases family 2 194 304 7.5E-12 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 312 472 1.9E-8 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 MSIP34_RS00055 ee716ca97ec9e8aa48e3645f2b573c87 724 SUPERFAMILY SSF51445 302 621 1.2E-73 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS06125 95f01f1b30d2275f7317ba6b51e134c7 277 Pfam PF12146 Serine aminopeptidase, S33 18 259 8.0E-24 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 MSIP34_RS06125 95f01f1b30d2275f7317ba6b51e134c7 277 SUPERFAMILY SSF53474 16 271 2.26E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS06125 95f01f1b30d2275f7317ba6b51e134c7 277 PANTHER PTHR11614 12 271 6.8E-32 T 23-04-2016 MSIP34_RS06125 95f01f1b30d2275f7317ba6b51e134c7 277 Gene3D G3DSA:3.40.50.1820 16 272 7.9E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS06125 95f01f1b30d2275f7317ba6b51e134c7 277 PANTHER PTHR11614:SF89 12 271 6.8E-32 T 23-04-2016 MSIP34_RS06125 95f01f1b30d2275f7317ba6b51e134c7 277 PIRSF PIRSF017388 4 276 1.9E-49 T 23-04-2016 IPR012354 Esterase/lipase GO:0052689 MSIP34_RS10910 6a01bcccac1cd9c4fc197c87b451bc10 335 PANTHER PTHR30273:SF2 3 331 9.6E-48 T 23-04-2016 MSIP34_RS10910 6a01bcccac1cd9c4fc197c87b451bc10 335 Pfam PF16220 Domain of unknown function (DUF4880) 11 53 1.0E-11 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS10910 6a01bcccac1cd9c4fc197c87b451bc10 335 PIRSF PIRSF018266 1 329 1.7E-68 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS10910 6a01bcccac1cd9c4fc197c87b451bc10 335 PANTHER PTHR30273 3 331 9.6E-48 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS10910 6a01bcccac1cd9c4fc197c87b451bc10 335 Pfam PF04773 FecR protein 125 213 2.4E-16 T 23-04-2016 IPR006860 FecR protein MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Gene3D G3DSA:3.30.1330.10 218 423 7.9E-40 T 23-04-2016 IPR016188 PurM-like, N-terminal domain MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Gene3D G3DSA:3.30.1330.10 647 811 2.4E-13 T 23-04-2016 IPR016188 PurM-like, N-terminal domain MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF109736 162 227 2.09E-21 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1297 5.4E-107 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF56042 826 1036 6.73E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF55326 631 817 2.12E-64 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 958 2.0E-10 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Pfam PF02769 AIR synthase related protein, C-terminal domain 434 591 6.5E-28 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SMART SM01211 1042 1297 4.3E-154 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF52317 1039 1297 5.21E-96 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 PANTHER PTHR10099 5 1298 0.0 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 PANTHER PTHR10099:SF5 5 1298 0.0 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF55326 228 431 7.67E-62 T 23-04-2016 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF56042 433 616 6.13E-50 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 6 1298 21.451 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 Gene3D G3DSA:3.40.50.880 1044 1267 3.2E-10 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 9 1296 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS04575 1ef3c4fa25e232c0f5162593bcc6a63e 1298 SUPERFAMILY SSF82697 6 158 1.83E-44 T 23-04-2016 MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 380 9.3E-48 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 383 2.4E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 PANTHER PTHR10799 256 382 4.3E-31 T 23-04-2016 MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 PANTHER PTHR10799 8 58 4.3E-31 T 23-04-2016 MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 Gene3D G3DSA:3.30.70.270 224 385 3.8E-55 T 23-04-2016 MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 Pfam PF05227 CHASE3 domain 38 167 2.0E-19 T 23-04-2016 IPR007891 CHASE3 MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 SMART SM00267 212 384 3.7E-64 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 SUPERFAMILY SSF55073 228 384 4.71E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 PANTHER PTHR10799:SF774 256 382 4.3E-31 T 23-04-2016 MSIP34_RS05445 eb1b2fa3aee528d1f0328976e7142ec4 386 PANTHER PTHR10799:SF774 8 58 4.3E-31 T 23-04-2016 MSIP34_RS10825 16af870f98ccd421e92dc2d792e814ec 305 PANTHER PTHR24567:SF37 116 301 3.5E-49 T 23-04-2016 MSIP34_RS10825 16af870f98ccd421e92dc2d792e814ec 305 PANTHER PTHR24567 116 301 3.5E-49 T 23-04-2016 MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PANTHER PTHR24322 8 128 7.4E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PANTHER PTHR24322 144 176 7.4E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 Gene3D G3DSA:3.40.50.720 3 241 1.9E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 Pfam PF00106 short chain dehydrogenase 5 186 9.8E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 1.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 1.6E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 SUPERFAMILY SSF51735 1 264 3.36E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 2.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 2.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06840 2df9bdcd4e4f6425109912d34289613f 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 2.4E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 20 39 2.4E-13 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 400 419 2.4E-13 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 148 168 2.4E-13 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 357 372 2.4E-13 T 23-04-2016 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 Gene3D G3DSA:3.90.1150.10 372 485 1.2E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 89 418 5.2E-62 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 Gene3D G3DSA:1.20.1340.10 17 95 3.4E-6 T 23-04-2016 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 PANTHER PTHR11999 17 485 1.6E-103 T 23-04-2016 MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 SUPERFAMILY SSF53383 17 485 8.7E-124 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS03525 e81e343c568890ce28056059951af3c5 488 Gene3D G3DSA:3.40.640.10 101 371 6.8E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 SUPERFAMILY SSF53254 5 186 1.71E-34 T 23-04-2016 IPR029033 Histidine phosphatase superfamily MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 186 5.1E-34 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 SMART SM00855 7 155 2.3E-11 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 Gene3D G3DSA:3.40.50.1240 6 185 2.3E-33 T 23-04-2016 IPR029033 Histidine phosphatase superfamily MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 PANTHER PTHR23029:SF1 2 194 1.7E-21 T 23-04-2016 MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 8 179 2.7E-51 T 23-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 MSIP34_RS00735 5ec221351e76b81d887bceb4c7a31e3a 198 PANTHER PTHR23029 2 194 1.7E-21 T 23-04-2016 MSIP34_RS01170 56518a26571044ca91dc220c24e0c0a4 344 Pfam PF11306 Protein of unknown function (DUF3108) 104 330 3.0E-29 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 MSIP34_RS13800 4d89be5cc28c27af41fa67f6b0a5ae70 327 PANTHER PTHR30273 9 327 3.5E-58 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS13800 4d89be5cc28c27af41fa67f6b0a5ae70 327 PIRSF PIRSF018266 8 327 1.5E-75 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS13800 4d89be5cc28c27af41fa67f6b0a5ae70 327 Pfam PF16220 Domain of unknown function (DUF4880) 19 58 1.6E-12 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS13800 4d89be5cc28c27af41fa67f6b0a5ae70 327 Pfam PF04773 FecR protein 124 213 1.3E-16 T 23-04-2016 IPR006860 FecR protein MSIP34_RS13800 4d89be5cc28c27af41fa67f6b0a5ae70 327 PANTHER PTHR30273:SF3 9 327 3.5E-58 T 23-04-2016 MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 SUPERFAMILY SSF52540 2 218 9.47E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 PANTHER PTHR24220:SF404 3 219 8.3E-108 T 23-04-2016 MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 PANTHER PTHR24220 3 219 8.3E-108 T 23-04-2016 MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 3 229 5.8E-101 T 23-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 SMART SM00382 26 208 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 Gene3D G3DSA:3.40.50.300 2 226 1.3E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03590 4ff9e38bfcc25ab4e702ceff1f0b957a 229 Pfam PF00005 ABC transporter 18 158 6.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SUPERFAMILY SSF56024 224 266 3.71E-24 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SUPERFAMILY SSF56024 382 483 2.67E-15 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SUPERFAMILY SSF56024 562 619 2.67E-15 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SUPERFAMILY SSF56024 161 183 3.71E-24 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 Pfam PF13091 PLD-like domain 571 617 5.4E-7 T 23-04-2016 IPR025202 Phospholipase D-like domain MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 Gene3D G3DSA:3.30.870.10 312 349 5.2E-13 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 Gene3D G3DSA:3.30.870.10 193 257 5.2E-13 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 Gene3D G3DSA:3.30.870.10 38 119 5.2E-13 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896 43 124 8.6E-46 T 23-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896 511 662 8.6E-46 T 23-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896 223 492 8.6E-46 T 23-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896 171 200 8.6E-46 T 23-04-2016 IPR015679 Phospholipase D family KEGG: 00564+3.1.4.4|KEGG: 00565+3.1.4.4|MetaCyc: PWY-3561|MetaCyc: PWY-7039 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 Gene3D G3DSA:3.30.870.10 258 275 8.5E-12 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 Gene3D G3DSA:3.30.870.10 353 620 8.5E-12 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SUPERFAMILY SSF56024 311 355 3.71E-24 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SUPERFAMILY SSF56024 24 128 3.71E-24 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896:SF80 43 124 8.6E-46 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896:SF80 511 662 8.6E-46 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896:SF80 223 492 8.6E-46 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 PANTHER PTHR18896:SF80 171 200 8.6E-46 T 23-04-2016 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SMART SM00155 228 262 340.0 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS12250 e4c1a5cf81f11d6712d743316fcbc963 680 SMART SM00155 568 595 8.6E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 PANTHER PTHR23293:SF12 53 253 6.1E-67 T 23-04-2016 MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 SUPERFAMILY SSF52402 34 215 4.51E-44 T 23-04-2016 MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 Gene3D G3DSA:3.40.50.620 29 224 2.5E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 59 252 7.0E-77 T 23-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 PANTHER PTHR23293 53 253 6.1E-67 T 23-04-2016 MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 55 227 1.4E-41 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 MSIP34_RS07735 079f1d76235d795320036d9e261dddfb 256 PIRSF PIRSF000857 11 256 1.7E-79 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 235 250 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 SUPERFAMILY SSF54368 10 95 2.22E-11 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 SUPERFAMILY SSF55931 105 450 3.53E-95 T 23-04-2016 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 Gene3D G3DSA:3.10.20.70 10 103 7.6E-7 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 PANTHER PTHR20852:SF7 4 454 4.0E-106 T 23-04-2016 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 Pfam PF00120 Glutamine synthetase, catalytic domain 106 450 1.6E-94 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 Gene3D G3DSA:3.30.590.10 108 439 2.1E-97 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 12 451 2.4E-198 T 23-04-2016 IPR017536 Glutamine synthetase, type III GO:0004356|GO:0006542 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 PANTHER PTHR20852 4 454 4.0E-106 T 23-04-2016 MSIP34_RS04830 0c530b94d2118c1a8a736eb62252a701 454 SMART SM01230 104 364 2.7E-94 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 Pfam PF00083 Sugar (and other) transporter 228 413 1.2E-8 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 Pfam PF00083 Sugar (and other) transporter 17 217 1.7E-22 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 SUPERFAMILY SSF103473 4 419 4.32E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 Gene3D G3DSA:1.20.1250.20 16 214 1.6E-18 T 23-04-2016 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 Gene3D G3DSA:1.20.1250.20 239 418 9.5E-15 T 23-04-2016 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 ProSitePatterns PS00216 Sugar transport proteins signature 1. 295 312 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 PANTHER PTHR23508:SF16 1 416 1.4E-175 T 23-04-2016 MSIP34_RS01970 09dfcba365702a3d492bcf380d63e097 423 PANTHER PTHR23508 1 416 1.4E-175 T 23-04-2016 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Gene3D G3DSA:2.40.240.10 382 497 3.0E-49 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 SUPERFAMILY SSF52374 52 379 8.16E-93 T 23-04-2016 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 52 371 3.5E-102 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Gene3D G3DSA:3.90.800.10 130 238 3.5E-43 T 23-04-2016 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 3 586 51.918 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 53 588 4.5E-220 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Gene3D G3DSA:2.40.240.10 498 584 1.1E-34 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 374 565 4.2E-58 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 239 249 9.1E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 70 81 9.1E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 85 98 9.1E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 68 9.1E-10 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Gene3D G3DSA:1.10.1160.10 297 372 6.6E-33 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 SUPERFAMILY SSF50715 374 584 3.56E-75 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Gene3D G3DSA:3.40.50.620 52 121 3.9E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 Gene3D G3DSA:3.40.50.620 241 296 3.9E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PANTHER PTHR11451 301 588 3.0E-206 T 23-04-2016 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PANTHER PTHR11451 52 276 3.0E-206 T 23-04-2016 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PANTHER PTHR11451:SF29 301 588 3.0E-206 T 23-04-2016 MSIP34_RS03325 157e029334628b2b94090314675fbd2c 588 PANTHER PTHR11451:SF29 52 276 3.0E-206 T 23-04-2016 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 2.2E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 SUPERFAMILY SSF52540 135 379 1.22E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Gene3D G3DSA:1.10.8.60 309 388 1.1E-24 T 23-04-2016 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Pfam PF00158 Sigma-54 interaction domain 136 302 4.8E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Gene3D G3DSA:3.40.50.300 134 308 2.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 458 8.0E-214 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 SMART SM00382 156 307 3.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 PANTHER PTHR32071:SF15 1 461 3.6E-223 T 23-04-2016 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 SUPERFAMILY SSF46689 376 461 3.85E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 441 3.3E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 461 3.3E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 PANTHER PTHR32071 1 461 3.6E-223 T 23-04-2016 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 SMART SM00448 2 113 2.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 SUPERFAMILY SSF52172 2 181 5.98E-41 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Gene3D G3DSA:1.10.10.60 392 461 1.1E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS12550 db348bc6aeef60d01061085786d5fca8 462 Gene3D G3DSA:3.40.50.2300 3 125 4.6E-34 T 23-04-2016 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 PRINTS PR01415 Ankyrin repeat signature 211 225 3.8E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 PRINTS PR01415 Ankyrin repeat signature 130 145 3.8E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 PANTHER PTHR24123 8 253 1.8E-69 T 23-04-2016 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 Gene3D G3DSA:1.25.40.20 172 273 2.0E-24 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 Pfam PF12796 Ankyrin repeats (3 copies) 71 160 2.1E-17 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 Pfam PF12796 Ankyrin repeats (3 copies) 167 258 6.4E-13 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 Pfam PF00023 Ankyrin repeat 38 64 0.0018 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 66 95 2.6E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 195 224 2.3E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 33 62 0.0074 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 129 158 3.7E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 162 191 0.0018 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 228 262 980.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 97 125 1.6 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SMART SM00248 3 32 210.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 Gene3D G3DSA:1.25.40.20 90 171 1.7E-26 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 SUPERFAMILY SSF48403 8 253 4.24E-62 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS10185 4feaa71b9f5530dbecd10914ef4a20c9 309 Gene3D G3DSA:1.25.40.20 8 89 6.9E-23 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain MSIP34_RS02520 2cbbb784e2c336b691601f41291cca60 263 Pfam PF01925 Sulfite exporter TauE/SafE 7 258 1.3E-56 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 MSIP34_RS02520 2cbbb784e2c336b691601f41291cca60 263 PANTHER PTHR30269:SF18 1 263 2.2E-80 T 23-04-2016 MSIP34_RS02520 2cbbb784e2c336b691601f41291cca60 263 PANTHER PTHR30269 1 263 2.2E-80 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 7.8E-33 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 Gene3D G3DSA:3.30.1340.10 1 87 1.6E-32 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 PANTHER PTHR33705:SF2 1 89 4.2E-40 T 23-04-2016 MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 PANTHER PTHR33705 1 89 4.2E-40 T 23-04-2016 MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 Pfam PF00381 PTS HPr component phosphorylation site 3 81 9.9E-28 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.2E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.2E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.2E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS01040 ed04976e64a7ba799a9c1f215a8dde1a 89 SUPERFAMILY SSF55594 1 87 2.75E-29 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 665 683 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Gene3D G3DSA:3.50.30.10 344 442 2.0E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Gene3D G3DSA:3.30.470.20 168 317 6.7E-57 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 PANTHER PTHR22931:SF7 1 239 0.0 T 23-04-2016 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 PANTHER PTHR22931:SF7 255 761 0.0 T 23-04-2016 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Pfam PF00391 PEP-utilising enzyme, mobile domain 355 426 1.9E-24 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 SUPERFAMILY SSF56059 3 356 4.24E-97 T 23-04-2016 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 1 760 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Gene3D G3DSA:3.30.1490.20 3 165 4.7E-59 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Gene3D G3DSA:3.20.20.60 452 760 1.6E-97 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 PIRSF PIRSF000854 1 761 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 442 759 2.9E-58 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 385 396 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 SUPERFAMILY SSF51621 434 760 1.18E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 5 315 1.1E-109 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 SUPERFAMILY SSF52009 321 438 7.98E-32 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 PANTHER PTHR22931 1 239 0.0 T 23-04-2016 MSIP34_RS11150 34dccde5864e1bf192e4a9fa3a9e8dc7 761 PANTHER PTHR22931 255 761 0.0 T 23-04-2016 MSIP34_RS01480 50de9499576e504721e9dd9cb252440f 139 PIRSF PIRSF005276 1 137 1.5E-49 T 23-04-2016 IPR007481 Stringent starvation protein B MSIP34_RS01480 50de9499576e504721e9dd9cb252440f 139 Pfam PF04386 Stringent starvation protein B 6 123 2.3E-33 T 23-04-2016 IPR007481 Stringent starvation protein B MSIP34_RS01480 50de9499576e504721e9dd9cb252440f 139 Gene3D G3DSA:2.30.30.220 2 108 4.2E-46 T 23-04-2016 IPR007481 Stringent starvation protein B MSIP34_RS01480 50de9499576e504721e9dd9cb252440f 139 SUPERFAMILY SSF101738 3 115 9.16E-46 T 23-04-2016 IPR007481 Stringent starvation protein B MSIP34_RS01480 50de9499576e504721e9dd9cb252440f 139 PANTHER PTHR37486:SF1 1 137 1.5E-42 T 23-04-2016 MSIP34_RS01480 50de9499576e504721e9dd9cb252440f 139 PANTHER PTHR37486 1 137 1.5E-42 T 23-04-2016 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 PRINTS PR00207 Flagellin signature 37 54 5.4E-23 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 PRINTS PR00207 Flagellin signature 76 95 5.4E-23 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 PRINTS PR00207 Flagellin signature 111 134 5.4E-23 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 SUPERFAMILY SSF64518 1 265 6.15E-87 T 23-04-2016 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 Gene3D G3DSA:1.20.1330.10 54 220 1.3E-52 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 PANTHER PTHR30244:SF1 2 265 4.6E-100 T 23-04-2016 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 PANTHER PTHR30244 2 265 4.6E-100 T 23-04-2016 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 139 1.4E-40 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS03825 91d74a1f712f069841cdbbfa72232edf 266 Pfam PF00700 Bacterial flagellin C-terminal helical region 180 264 2.2E-24 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS06880 1bb573e7291819cb94b3dec413ff3ed6 201 PIRSF PIRSF029811 6 201 5.6E-73 T 23-04-2016 IPR027016 Uncharacterised protein with YceI domain MSIP34_RS06880 1bb573e7291819cb94b3dec413ff3ed6 201 Gene3D G3DSA:2.40.128.110 29 200 1.6E-11 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS06880 1bb573e7291819cb94b3dec413ff3ed6 201 SMART SM00867 30 199 1.1E-10 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS06880 1bb573e7291819cb94b3dec413ff3ed6 201 SUPERFAMILY SSF101874 29 201 7.06E-19 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS06880 1bb573e7291819cb94b3dec413ff3ed6 201 Pfam PF04264 YceI-like domain 31 198 1.6E-11 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS06315 89f8b4d09a98170cb7b735156fb81040 211 Pfam PF09335 SNARE associated Golgi protein 38 163 8.9E-22 T 23-04-2016 IPR032816 SNARE associated Golgi protein MSIP34_RS06315 89f8b4d09a98170cb7b735156fb81040 211 PANTHER PTHR30353:SF13 1 208 1.0E-55 T 23-04-2016 MSIP34_RS06315 89f8b4d09a98170cb7b735156fb81040 211 PANTHER PTHR30353 1 208 1.0E-55 T 23-04-2016 IPR032818 DedA family MSIP34_RS07880 35603322ad47a8d32fc8834256004e35 1066 Gene3D G3DSA:3.10.350.10 208 263 5.0E-6 T 23-04-2016 IPR018392 LysM domain MSIP34_RS07880 35603322ad47a8d32fc8834256004e35 1066 Gene3D G3DSA:1.25.40.10 562 604 3.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS07880 35603322ad47a8d32fc8834256004e35 1066 Gene3D G3DSA:1.25.40.10 1019 1047 3.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS07880 35603322ad47a8d32fc8834256004e35 1066 Gene3D G3DSA:1.25.40.10 682 683 3.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS07880 35603322ad47a8d32fc8834256004e35 1066 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 215 287 8.2E-26 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal MSIP34_RS07880 35603322ad47a8d32fc8834256004e35 1066 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1021 1064 1.3E-17 T 23-04-2016 IPR020011 Motility protein FimV, C-terminal MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Gene3D G3DSA:3.40.50.980 382 540 2.9E-39 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 ProSitePatterns PS00455 Putative AMP-binding domain signature. 376 387 - T 23-04-2016 IPR020845 AMP-binding, conserved site MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Gene3D G3DSA:3.40.1130.10 14 111 1.4E-8 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 PANTHER PTHR24096 128 710 8.4E-262 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Gene3D G3DSA:3.40.50.980 233 381 5.3E-18 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 SMART SM00563 34 144 5.5E-27 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 SUPERFAMILY SSF69593 8 185 3.27E-23 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 PANTHER PTHR24096:SF177 128 710 8.4E-262 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 SUPERFAMILY SSF56801 205 710 4.97E-96 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Gene3D G3DSA:3.30.300.30 614 710 5.9E-10 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Pfam PF01553 Acyltransferase 15 141 3.5E-18 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Gene3D G3DSA:2.30.38.10 541 609 1.2E-13 T 23-04-2016 MSIP34_RS13900 cb2e3c2283d538cb9a83c7348a211f1d 711 Pfam PF00501 AMP-binding enzyme 235 616 1.4E-64 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 SUPERFAMILY SSF53474 43 326 7.43E-75 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PRINTS PR00412 Epoxide hydrolase signature 73 91 8.8E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PRINTS PR00412 Epoxide hydrolase signature 153 166 8.8E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PRINTS PR00412 Epoxide hydrolase signature 301 323 8.8E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 Pfam PF00561 alpha/beta hydrolase fold 67 311 2.8E-30 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PANTHER PTHR10992:SF870 44 326 1.6E-134 T 23-04-2016 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PANTHER PTHR10992 44 326 1.6E-134 T 23-04-2016 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 107 2.3E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 PRINTS PR00111 Alpha/beta hydrolase fold signature 271 285 2.3E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS13300 236d1a8502511161f66e16b2b3c85ac5 330 Gene3D G3DSA:3.40.50.1820 40 327 6.1E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS04000 9476a90b6b9ddf3e149cd27b66ad4fb7 172 Pfam PF02308 MgtC family 32 155 2.7E-37 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS04000 9476a90b6b9ddf3e149cd27b66ad4fb7 172 PANTHER PTHR33778 8 154 1.1E-44 T 23-04-2016 MSIP34_RS04000 9476a90b6b9ddf3e149cd27b66ad4fb7 172 PRINTS PR01837 MgtC/SapB protein signature 54 72 1.6E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS04000 9476a90b6b9ddf3e149cd27b66ad4fb7 172 PRINTS PR01837 MgtC/SapB protein signature 35 54 1.6E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS04000 9476a90b6b9ddf3e149cd27b66ad4fb7 172 PRINTS PR01837 MgtC/SapB protein signature 81 103 1.6E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS04000 9476a90b6b9ddf3e149cd27b66ad4fb7 172 PRINTS PR01837 MgtC/SapB protein signature 110 134 1.6E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 SUPERFAMILY SSF51735 158 310 5.44E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 PIRSF PIRSF000445 1 415 1.2E-149 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 151 2.2E-49 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 411 1.6E-130 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 PANTHER PTHR13812:SF18 1 399 4.0E-111 T 23-04-2016 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 SUPERFAMILY SSF69742 1 153 1.57E-46 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 Gene3D G3DSA:3.40.50.720 179 355 5.7E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 94 117 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 SUPERFAMILY SSF69075 312 413 6.02E-29 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 315 412 3.4E-28 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 PANTHER PTHR13812 1 399 4.0E-111 T 23-04-2016 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 413 29.443 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS12660 aa824e810abc37258657c01a19882fd9 415 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 166 301 1.9E-43 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PANTHER PTHR19375 9 331 1.5E-173 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 4.6E-155 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 Gene3D G3DSA:3.30.420.40 10 164 4.1E-45 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 Pfam PF06723 MreB/Mbl protein 10 340 2.0E-146 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 Gene3D G3DSA:3.90.640.10 192 264 3.1E-28 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PANTHER PTHR19375:SF117 9 331 1.5E-173 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 Gene3D G3DSA:3.30.420.40 268 322 8.3E-33 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 Gene3D G3DSA:3.30.420.40 165 191 8.3E-33 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 SUPERFAMILY SSF53067 9 151 2.35E-37 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 SUPERFAMILY SSF53067 155 337 2.3E-48 T 23-04-2016 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.1E-61 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.1E-61 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.1E-61 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.1E-61 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS12740 ebadea89311b83b9e546c7e4bb595888 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.1E-61 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 SUPERFAMILY SSF54631 313 435 3.97E-10 T 23-04-2016 MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 456 538 5.7E-12 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 SUPERFAMILY SSF141868 40 271 2.62E-61 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 Gene3D G3DSA:3.10.580.10 314 432 1.1E-7 T 23-04-2016 MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 SMART SM00052 33 275 3.7E-31 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 Gene3D G3DSA:3.20.20.450 40 272 6.5E-55 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 Pfam PF00990 Diguanylate cyclase, GGDEF domain 444 532 4.7E-12 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 PANTHER PTHR33121:SF10 40 308 5.6E-49 T 23-04-2016 MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 SMART SM00267 428 615 1.7E-6 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 Gene3D G3DSA:3.30.70.270 443 612 1.2E-19 T 23-04-2016 MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 Pfam PF00563 EAL domain 41 270 1.1E-49 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 PANTHER PTHR33121 40 308 5.6E-49 T 23-04-2016 MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 Pfam PF00571 CBS domain 316 361 0.0021 T 23-04-2016 IPR000644 CBS domain MSIP34_RS06500 7a0548b2799cdc24291d4973a905284c 619 SUPERFAMILY SSF55073 445 613 1.1E-19 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 35.076 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 Pfam PF00579 tRNA synthetases class I (W and Y) 251 348 1.6E-9 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 177 2.5E-50 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PANTHER PTHR10055 4 171 2.7E-159 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PANTHER PTHR10055 242 399 2.7E-159 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 187 8.0E-58 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PANTHER PTHR10055:SF6 4 171 2.7E-159 T 23-04-2016 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PANTHER PTHR10055:SF6 242 399 2.7E-159 T 23-04-2016 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 Gene3D G3DSA:1.10.240.10 275 365 3.3E-34 T 23-04-2016 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 SUPERFAMILY SSF52374 5 172 5.31E-91 T 23-04-2016 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 SUPERFAMILY SSF52374 243 397 5.31E-91 T 23-04-2016 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 Gene3D G3DSA:3.40.50.620 241 274 7.4E-87 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 Gene3D G3DSA:3.40.50.620 5 170 7.4E-87 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 4.4E-21 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 4.4E-21 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 MSIP34_RS04695 769b66d228f8ef620976afaf35c4a13c 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 4.4E-21 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 3.4E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 3.4E-36 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.8 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 Gene3D G3DSA:3.40.1380.10 63 192 2.3E-41 T 23-04-2016 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 PANTHER PTHR11693 1 287 3.5E-121 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 Gene3D G3DSA:1.10.287.80 236 282 1.1E-28 T 23-04-2016 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 6.4E-106 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 Gene3D G3DSA:1.10.287.80 202 235 1.3E-40 T 23-04-2016 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 Gene3D G3DSA:1.10.287.80 19 60 1.3E-40 T 23-04-2016 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 Pfam PF00231 ATP synthase 5 286 4.3E-91 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 MSIP34_RS14115 6733eae764aa350d37617934f192b6f9 287 SUPERFAMILY SSF52943 3 287 3.24E-95 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain MSIP34_RS03240 be70995f6812120409219aade8600753 584 Gene3D G3DSA:3.40.50.300 344 576 3.2E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03240 be70995f6812120409219aade8600753 584 SUPERFAMILY SSF90123 23 330 2.49E-68 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS03240 be70995f6812120409219aade8600753 584 Pfam PF00664 ABC transporter transmembrane region 37 286 2.6E-42 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS03240 be70995f6812120409219aade8600753 584 Pfam PF00005 ABC transporter 362 512 5.8E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS03240 be70995f6812120409219aade8600753 584 PANTHER PTHR24221 18 584 1.7E-220 T 23-04-2016 MSIP34_RS03240 be70995f6812120409219aade8600753 584 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 21 583 6.3E-216 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 MSIP34_RS03240 be70995f6812120409219aade8600753 584 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS03240 be70995f6812120409219aade8600753 584 SMART SM00382 371 558 3.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03240 be70995f6812120409219aade8600753 584 SUPERFAMILY SSF52540 338 583 3.3E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03240 be70995f6812120409219aade8600753 584 Gene3D G3DSA:1.20.1560.10 23 330 3.9E-66 T 23-04-2016 MSIP34_RS03400 ad3cbc46f3ffdd4c50b0b89e1599d177 150 SUPERFAMILY SSF53254 3 130 1.44E-21 T 23-04-2016 IPR029033 Histidine phosphatase superfamily MSIP34_RS03400 ad3cbc46f3ffdd4c50b0b89e1599d177 150 SMART SM00855 2 106 1.5E-7 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 MSIP34_RS03400 ad3cbc46f3ffdd4c50b0b89e1599d177 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 63 1.2E-7 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 MSIP34_RS03400 ad3cbc46f3ffdd4c50b0b89e1599d177 150 Gene3D G3DSA:3.40.50.1240 1 150 9.8E-29 T 23-04-2016 IPR029033 Histidine phosphatase superfamily MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 SUPERFAMILY SSF51735 6 247 1.3E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 247 6.6E-58 T 23-04-2016 MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.8E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 6.1E-5 T 23-04-2016 MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PANTHER PTHR24321:SF6 2 248 4.1E-47 T 23-04-2016 MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 PANTHER PTHR24321 2 248 4.1E-47 T 23-04-2016 MSIP34_RS11845 9498534fc8c87199da6738b4ac2c4e4b 249 Gene3D G3DSA:3.40.50.720 1 247 1.6E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 296 1.5E-95 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 PANTHER PTHR11088 1 291 7.3E-98 T 23-04-2016 MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 Gene3D G3DSA:3.40.50.300 8 176 4.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 SUPERFAMILY SSF52540 11 156 3.59E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 Pfam PF01715 IPP transferase 44 291 3.8E-84 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 SUPERFAMILY SSF52540 8 43 1.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 SUPERFAMILY SSF52540 159 203 1.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 10 315 28.86 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 MSIP34_RS06575 ae6488ffe0ecf3622cbb9842da0cc40e 318 Gene3D G3DSA:1.10.287.890 206 289 1.1E-31 T 23-04-2016 MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 109 2.2E-35 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 Pfam PF02033 Ribosome-binding factor A 7 107 1.5E-32 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 114 22.58 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 Gene3D G3DSA:3.30.300.20 4 114 1.6E-40 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 PANTHER PTHR33515 1 122 1.1E-44 T 23-04-2016 MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 SUPERFAMILY SSF89919 3 109 2.09E-34 T 23-04-2016 IPR023799 Ribosome-binding factor A domain MSIP34_RS00380 ffa2467432deb27d521244e1f0deaad4 123 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 94 4.0E-39 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 MSIP34_RS05025 58277bae67da8e5c7e2386f420fb0cb9 247 Gene3D G3DSA:3.40.1210.10 1 245 5.4E-89 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 MSIP34_RS05025 58277bae67da8e5c7e2386f420fb0cb9 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 38.701 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 MSIP34_RS05025 58277bae67da8e5c7e2386f420fb0cb9 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 4.9E-71 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 MSIP34_RS05025 58277bae67da8e5c7e2386f420fb0cb9 247 Pfam PF01975 Survival protein SurE 3 182 1.6E-58 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 MSIP34_RS05025 58277bae67da8e5c7e2386f420fb0cb9 247 PANTHER PTHR30457 1 245 3.1E-92 T 23-04-2016 MSIP34_RS05025 58277bae67da8e5c7e2386f420fb0cb9 247 SUPERFAMILY SSF64167 1 245 7.72E-86 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.5E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 SMART SM00357 3 67 1.4E-29 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 PANTHER PTHR11544 1 67 1.9E-37 T 23-04-2016 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 SUPERFAMILY SSF50249 1 65 2.01E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 Gene3D G3DSA:2.40.50.140 1 65 2.6E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 PIRSF PIRSF002599 1 67 1.6E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 PRINTS PR00050 Cold shock protein signature 25 34 9.4E-17 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 PRINTS PR00050 Cold shock protein signature 40 58 9.4E-17 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS06895 8c33e22ee5384f7aecbc2318b6d083f7 67 PRINTS PR00050 Cold shock protein signature 4 19 9.4E-17 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS04015 f022c89e845271637be3369e1e9923a9 246 PANTHER PTHR30433 2 246 5.1E-91 T 23-04-2016 MSIP34_RS04015 f022c89e845271637be3369e1e9923a9 246 PANTHER PTHR30433:SF3 2 246 5.1E-91 T 23-04-2016 IPR022522 Flagellar motor stator, MotA MSIP34_RS04015 f022c89e845271637be3369e1e9923a9 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 220 1.4E-23 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS12830 8521b5341aaa525c51e024266090519f 331 Pfam PF05175 Methyltransferase small domain 150 266 1.2E-17 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 MSIP34_RS12830 8521b5341aaa525c51e024266090519f 331 SUPERFAMILY SSF53335 128 301 9.56E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12830 8521b5341aaa525c51e024266090519f 331 Gene3D G3DSA:3.40.50.150 130 270 3.0E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12830 8521b5341aaa525c51e024266090519f 331 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 220 226 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MSIP34_RS12830 8521b5341aaa525c51e024266090519f 331 PANTHER PTHR18895 131 309 3.7E-28 T 23-04-2016 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 SUPERFAMILY SSF51120 928 972 1.01E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 SUPERFAMILY SSF51120 1339 1495 1.01E-13 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1387 1405 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1396 1414 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1369 1387 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1381 1398 0.016 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1364 1380 41.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1399 1416 0.0059 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 Gene3D G3DSA:3.40.50.410 1023 1207 3.0E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 337 407 1.4E-13 T 23-04-2016 IPR010221 VCBS repeat MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 787 879 2.6E-16 T 23-04-2016 IPR010221 VCBS repeat MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 558 636 7.5E-15 T 23-04-2016 IPR010221 VCBS repeat MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 Gene3D G3DSA:2.150.10.10 1336 1493 1.2E-8 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 Pfam PF13519 von Willebrand factor type A domain 1026 1141 2.3E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 SUPERFAMILY SSF53300 1024 1206 3.12E-20 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 SMART SM00327 1023 1227 2.8E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 PRINTS PR00313 NodO calcium binding signature 1370 1381 3.5E-8 T 23-04-2016 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 PRINTS PR00313 NodO calcium binding signature 1400 1408 3.5E-8 T 23-04-2016 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 PRINTS PR00313 NodO calcium binding signature 1382 1390 3.5E-8 T 23-04-2016 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 PRINTS PR00313 NodO calcium binding signature 1409 1418 3.5E-8 T 23-04-2016 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 926 944 4.1E-6 T 23-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 1373 1394 4.1E-6 T 23-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 MSIP34_RS05160 49d1b7d0ed874fd5b856b7ecfe58f2a4 1536 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1432 1533 4.4E-19 T 23-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 Gene3D G3DSA:2.130.10.10 26 347 2.3E-65 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 Pfam PF02239 Cytochrome D1 heme domain 229 337 3.4E-6 T 23-04-2016 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 Pfam PF02239 Cytochrome D1 heme domain 23 101 2.6E-6 T 23-04-2016 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 SUPERFAMILY SSF50974 11 353 6.54E-68 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 SMART SM00320 285 324 1.3 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 SMART SM00320 243 282 91.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 SMART SM00320 157 196 48.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 SMART SM00320 50 90 130.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 MSIP34_RS00860 40bed96e399b3395df2f6365c57337e6 356 PANTHER PTHR13833 135 344 1.9E-16 T 23-04-2016 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 PIRSF PIRSF001467 1 163 1.8E-26 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.7E-10 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.7E-10 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.7E-10 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 PANTHER PTHR11071 1 163 2.9E-70 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 Gene3D G3DSA:2.40.100.10 2 162 1.7E-53 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 PANTHER PTHR11071:SF192 1 163 2.9E-70 T 23-04-2016 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 SUPERFAMILY SSF50891 2 162 2.05E-58 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 MSIP34_RS11330 99639e34311f76c9ed3cf540a9fc425c 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 2.9E-47 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 Gene3D G3DSA:3.30.70.1150 83 162 1.1E-28 T 23-04-2016 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 PANTHER PTHR30239 1 161 6.3E-88 T 23-04-2016 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 63 1.0E-28 T 23-04-2016 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 SUPERFAMILY SSF55021 79 162 7.17E-26 T 23-04-2016 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 7.0E-64 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 SUPERFAMILY SSF55021 1 76 2.48E-23 T 23-04-2016 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 Gene3D G3DSA:3.30.70.260 1 78 1.8E-37 T 23-04-2016 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 3.3E-26 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03090 940473c13f5e5a8cfdf54664b4a77fe9 163 Pfam PF13710 ACT domain 13 73 2.3E-15 T 23-04-2016 MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 PANTHER PTHR30050 1 204 2.1E-39 T 23-04-2016 MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 Gene3D G3DSA:1.10.8.60 137 202 1.9E-25 T 23-04-2016 MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 Pfam PF00308 Bacterial dnaA protein 72 182 1.2E-9 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 PANTHER PTHR30050:SF5 1 204 2.1E-39 T 23-04-2016 MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 SUPERFAMILY SSF52540 16 181 3.07E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 Gene3D G3DSA:3.40.50.300 54 83 0.001 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 Gene3D G3DSA:3.40.50.300 1 53 1.8E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01150 4484506b39b033bbd0e1ebcd35ec0f34 204 Gene3D G3DSA:3.40.50.300 84 134 2.9E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00520 b5cc67cb23ea90007996b983e68a8882 109 PANTHER PTHR12231 22 103 5.6E-13 T 23-04-2016 MSIP34_RS00520 b5cc67cb23ea90007996b983e68a8882 109 SMART SM00450 7 103 6.6E-22 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS00520 b5cc67cb23ea90007996b983e68a8882 109 Pfam PF00581 Rhodanese-like domain 10 99 1.3E-13 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS00520 b5cc67cb23ea90007996b983e68a8882 109 Gene3D G3DSA:3.40.250.10 4 105 2.5E-28 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS00520 b5cc67cb23ea90007996b983e68a8882 109 SUPERFAMILY SSF52821 5 106 6.42E-30 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 PANTHER PTHR32125 15 245 9.1E-106 T 23-04-2016 MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 270 110.442 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 Gene3D G3DSA:3.40.1280.10 15 177 2.2E-61 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 36 238 2.8E-59 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 Gene3D G3DSA:1.10.1270.20 179 265 2.6E-35 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 PIRSF PIRSF000386 14 269 3.3E-92 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 PANTHER PTHR32125:SF1 15 245 9.1E-106 T 23-04-2016 MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 SUPERFAMILY SSF75217 15 263 2.29E-95 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS12030 4230f36f6eccf9b9ad37b9e500a70d18 270 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 15 250 4.1E-92 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 MSIP34_RS12945 0c6864fd43ce84d21fd42433faf6ea38 137 PIRSF PIRSF000714 1 136 2.4E-41 T 23-04-2016 IPR026026 Histidine triad hydrolase, Hint-type MSIP34_RS12945 0c6864fd43ce84d21fd42433faf6ea38 137 SUPERFAMILY SSF54197 1 134 4.79E-37 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 MSIP34_RS12945 0c6864fd43ce84d21fd42433faf6ea38 137 Pfam PF01230 HIT domain 17 98 2.4E-14 T 23-04-2016 IPR001310 Histidine triad (HIT) protein MSIP34_RS12945 0c6864fd43ce84d21fd42433faf6ea38 137 PANTHER PTHR23089 19 108 7.2E-21 T 23-04-2016 IPR001310 Histidine triad (HIT) protein MSIP34_RS12945 0c6864fd43ce84d21fd42433faf6ea38 137 Gene3D G3DSA:3.30.428.10 2 135 1.6E-38 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 MSIP34_RS12945 0c6864fd43ce84d21fd42433faf6ea38 137 PANTHER PTHR23089:SF13 19 108 7.2E-21 T 23-04-2016 MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 219 384 2.9E-41 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 SMART SM00267 211 385 1.9E-52 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 PANTHER PTHR10799 21 165 1.4E-34 T 23-04-2016 MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 PANTHER PTHR10799 255 380 1.4E-34 T 23-04-2016 MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 SUPERFAMILY SSF55073 227 383 4.24E-44 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 PANTHER PTHR10799:SF774 21 165 1.4E-34 T 23-04-2016 MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 PANTHER PTHR10799:SF774 255 380 1.4E-34 T 23-04-2016 MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 377 1.0E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07795 733f6e7b3bbab8a0a2524a93c2634bca 388 Gene3D G3DSA:3.30.70.270 224 384 9.6E-51 T 23-04-2016 MSIP34_RS05390 d2fce709794a08a900cafa3ca6f10f02 687 Pfam PF05170 AsmA family 307 572 1.5E-10 T 23-04-2016 IPR007844 AsmA MSIP34_RS05390 d2fce709794a08a900cafa3ca6f10f02 687 Pfam PF05170 AsmA family 14 143 1.1E-8 T 23-04-2016 IPR007844 AsmA MSIP34_RS05390 d2fce709794a08a900cafa3ca6f10f02 687 PANTHER PTHR30441 319 631 1.0E-14 T 23-04-2016 MSIP34_RS08115 2c29308c1213441d3166aaa1f49f2b7e 90 SUPERFAMILY SSF46785 27 88 2.54E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08115 2c29308c1213441d3166aaa1f49f2b7e 90 Gene3D G3DSA:1.10.10.10 23 88 9.7E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 Gene3D G3DSA:2.40.50.140 1 165 5.1E-60 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 PIRSF PIRSF002070 1 154 2.8E-41 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 SUPERFAMILY SSF50249 3 165 1.3E-61 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 Hamap MF_00984 Single-stranded DNA-binding protein. 4 111 38.817 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 165 4.3E-60 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 Pfam PF00436 Single-strand binding protein family 4 107 1.1E-45 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 PANTHER PTHR10302 3 165 7.0E-54 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 MSIP34_RS12500 b71732056de0c4ccb0aaea29171b86e7 165 PANTHER PTHR10302:SF0 3 165 7.0E-54 T 23-04-2016 MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 SUPERFAMILY SSF48576 3 308 4.0E-93 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 Pfam PF00348 Polyprenyl synthetase 19 248 2.9E-73 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 68 82 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 PANTHER PTHR12001:SF47 1 309 3.1E-110 T 23-04-2016 MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 190 202 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 Gene3D G3DSA:1.10.600.10 1 308 1.0E-94 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS02605 94f27ff2d0e99c274ab93c67e7937ff7 309 PANTHER PTHR12001 1 309 3.1E-110 T 23-04-2016 IPR017446 Polyprenyl synthetase-related MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PANTHER PTHR12128 1 290 3.1E-138 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 Pfam PF00701 Dihydrodipicolinate synthetase family 2 285 2.6E-107 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 SUPERFAMILY SSF51569 2 287 6.49E-105 T 23-04-2016 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 Gene3D G3DSA:3.20.20.70 1 288 8.8E-120 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 285 9.0E-113 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PIRSF PIRSF001365 1 289 5.2E-93 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PANTHER PTHR12128:SF34 1 290 3.1E-138 T 23-04-2016 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 SMART SM01130 1 289 1.3E-144 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 68.252 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.3E-36 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.3E-36 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.3E-36 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS09100 d586fbc31e09fef6add7ede87e34fd73 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.3E-36 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 MSIP34_RS03415 6dc5335db7a8dd29ad15d0dbf97dd8f0 251 SUPERFAMILY SSF51351 1 249 1.96E-85 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 MSIP34_RS03415 6dc5335db7a8dd29ad15d0dbf97dd8f0 251 PANTHER PTHR21139 1 249 2.7E-104 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 MSIP34_RS03415 6dc5335db7a8dd29ad15d0dbf97dd8f0 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 37.654 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 MSIP34_RS03415 6dc5335db7a8dd29ad15d0dbf97dd8f0 251 Pfam PF00121 Triosephosphate isomerase 4 246 1.1E-83 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 MSIP34_RS03415 6dc5335db7a8dd29ad15d0dbf97dd8f0 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 7.0E-67 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 MSIP34_RS03415 6dc5335db7a8dd29ad15d0dbf97dd8f0 251 Gene3D G3DSA:3.20.20.70 1 250 1.7E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS03765 025165524b62c4713f63802b596cb497 157 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 67 141 1.3E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS03765 025165524b62c4713f63802b596cb497 157 SUPERFAMILY SSF46626 4 155 7.51E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS03765 025165524b62c4713f63802b596cb497 157 PIRSF PIRSF000008 1 157 8.3E-80 T 23-04-2016 IPR009153 Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 MSIP34_RS03765 025165524b62c4713f63802b596cb497 157 Gene3D G3DSA:1.10.760.10 54 156 6.1E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS03765 025165524b62c4713f63802b596cb497 157 TIGRFAM TIGR03872 cytochrome_MoxG: cytochrome c(L), periplasmic 26 156 1.4E-69 T 23-04-2016 IPR009153 Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 8 330 40.114 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 PANTHER PTHR30160 22 324 1.2E-97 T 23-04-2016 MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 328 2.7E-113 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 SUPERFAMILY SSF52540 53 201 1.46E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 Gene3D G3DSA:3.40.50.300 53 95 1.7E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 26 318 5.6E-84 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 MSIP34_RS03245 15c4cc1fe15adfa6fce3e65e9633a6b4 331 PANTHER PTHR30160:SF13 22 324 1.2E-97 T 23-04-2016 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 TIGRFAM TIGR00433 bioB: biotin synthase 31 327 3.2E-122 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 SUPERFAMILY SSF102114 22 329 8.89E-87 T 23-04-2016 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 237 327 1.8E-16 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 Gene3D G3DSA:3.20.20.70 22 329 3.5E-95 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 PANTHER PTHR22976:SF1 1 329 2.5E-156 T 23-04-2016 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 SMART SM00729 60 272 5.0E-38 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 PANTHER PTHR22976 1 329 2.5E-156 T 23-04-2016 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 Hamap MF_01694 Biotin synthase [bioB]. 22 330 41.393 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 PIRSF PIRSF001619 5 330 7.9E-132 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 Pfam PF04055 Radical SAM superfamily 67 212 1.2E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS02870 8ea0a5fe583022a6db94c2dad14b7069 330 SMART SM00876 237 329 1.1E-44 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 SUPERFAMILY SSF52374 109 447 2.82E-88 T 23-04-2016 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Pfam PF05746 DALR anticodon binding domain 435 552 8.6E-36 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Gene3D G3DSA:1.10.730.10 440 552 3.7E-44 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 SMART SM00836 435 552 1.4E-55 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 552 1.0E-137 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 SMART SM01016 3 86 5.1E-38 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 PANTHER PTHR11956:SF6 1 552 1.3E-227 T 23-04-2016 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 86 1.2E-26 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 SUPERFAMILY SSF55190 4 106 2.22E-27 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 1.5E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 1.5E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 1.5E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 302 323 1.5E-22 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 125 134 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 552 25.828 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 PANTHER PTHR11956 1 552 1.3E-227 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 SUPERFAMILY SSF47323 430 552 3.86E-36 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Gene3D G3DSA:3.30.1360.70 1 104 1.4E-31 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Pfam PF00750 tRNA synthetases class I (R) 101 399 6.1E-26 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 MSIP34_RS14070 e81e40ac4d5784040aa47219f2b16071 552 Gene3D G3DSA:3.40.50.620 110 439 1.1E-105 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS04640 7d1bb05c43bd421e11549eaae6a084db 113 Pfam PF04342 Putative member of DMT superfamily (DUF486) 7 111 1.5E-43 T 23-04-2016 IPR007437 Putative member of DMT superfamily MSIP34_RS04640 7d1bb05c43bd421e11549eaae6a084db 113 PANTHER PTHR38482 1 113 2.1E-52 T 23-04-2016 MSIP34_RS04640 7d1bb05c43bd421e11549eaae6a084db 113 PIRSF PIRSF021239 1 113 7.0E-51 T 23-04-2016 IPR007437 Putative member of DMT superfamily MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 PANTHER PTHR10584 1 304 3.1E-107 T 23-04-2016 MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 PRINTS PR00990 Ribokinase signature 216 227 6.0E-5 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 PRINTS PR00990 Ribokinase signature 42 61 6.0E-5 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 PRINTS PR00990 Ribokinase signature 180 195 6.0E-5 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 PANTHER PTHR10584:SF15 1 304 3.1E-107 T 23-04-2016 MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 Gene3D G3DSA:3.40.1190.20 1 304 1.2E-58 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 SUPERFAMILY SSF53613 1 297 2.49E-64 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS11405 b8215d50e9113f63d523fda363d78484 313 Pfam PF00294 pfkB family carbohydrate kinase 14 293 6.0E-40 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 PANTHER PTHR26402:SF458 7 210 1.0E-61 T 23-04-2016 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 SUPERFAMILY SSF52172 6 138 4.7E-31 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 Pfam PF00072 Response regulator receiver domain 9 121 1.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 PANTHER PTHR26402 7 210 1.0E-61 T 23-04-2016 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 Gene3D G3DSA:3.40.50.2300 3 125 4.2E-32 T 23-04-2016 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 1.1E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 1.1E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 1.1E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 SUPERFAMILY SSF46894 142 213 1.6E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 SMART SM00448 7 120 4.7E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 Gene3D G3DSA:1.10.10.10 126 213 5.9E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 3.2E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03815 aaf1b47066796fe00f59f5ae179954ec 214 SMART SM00421 150 207 1.8E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 SUPERFAMILY SSF111369 51 286 2.22E-31 T 23-04-2016 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 282 3.4E-27 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 PANTHER PTHR30572:SF1 6 304 2.6E-92 T 23-04-2016 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 Gene3D G3DSA:1.20.1600.10 102 172 2.9E-4 T 23-04-2016 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 PANTHER PTHR30572 6 304 2.6E-92 T 23-04-2016 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 Gene3D G3DSA:2.40.50.100 173 202 2.4E-17 T 23-04-2016 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 Gene3D G3DSA:2.40.50.100 63 95 2.4E-17 T 23-04-2016 MSIP34_RS06215 a3c3b438d6a69320439864b3f9875570 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 307 8.7E-57 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 6.5E-40 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 SUPERFAMILY SSF47729 1 91 2.5E-29 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 Gene3D G3DSA:4.10.520.10 1 91 8.4E-34 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 SMART SM00411 1 91 9.5E-42 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 PANTHER PTHR33175 1 91 2.3E-43 T 23-04-2016 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.9E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.9E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.9E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.9E-29 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 PANTHER PTHR33175:SF5 1 91 2.3E-43 T 23-04-2016 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.477 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 MSIP34_RS05630 66e8c3f93e35a3203771a8021c4634cc 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 PANTHER PTHR30069 53 489 3.0E-139 T 23-04-2016 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 Gene3D G3DSA:2.170.130.10 43 174 3.0E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 PANTHER PTHR30069:SF13 53 489 3.0E-139 T 23-04-2016 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 SUPERFAMILY SSF56935 51 689 7.18E-89 T 23-04-2016 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 Pfam PF00593 TonB dependent receptor 437 686 1.9E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 Gene3D G3DSA:2.40.170.20 179 689 2.1E-58 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00895 d8984ed6bca87372bdc7e1160403e89e 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 167 1.3E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 851 6.8E-269 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 571 580 2.5E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 2.5E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 537 550 2.5E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 2.5E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 403 418 2.5E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 SUPERFAMILY SSF50677 202 404 3.14E-46 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Pfam PF08264 Anticodon-binding domain of tRNA 695 843 1.0E-23 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PANTHER PTHR11946:SF11 279 926 0.0 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PANTHER PTHR11946:SF11 231 256 0.0 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PANTHER PTHR11946:SF11 9 213 0.0 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PANTHER PTHR11946 279 926 0.0 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PANTHER PTHR11946 231 256 0.0 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 PANTHER PTHR11946 9 213 0.0 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Gene3D G3DSA:3.90.740.10 204 391 8.7E-50 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 SUPERFAMILY SSF47323 662 925 4.49E-69 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 650 2.2E-207 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Gene3D G3DSA:1.10.730.10 651 835 1.6E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 SUPERFAMILY SSF52374 8 200 7.74E-139 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 SUPERFAMILY SSF52374 405 657 7.74E-139 T 23-04-2016 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Pfam PF06827 Zinc finger found in FPG and IleRS 897 923 3.9E-8 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 926 20.589 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Gene3D G3DSA:3.40.50.620 408 646 1.1E-137 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS02655 9d3f0adbecbbb7fc0a84e356e0c7e4ab 935 Gene3D G3DSA:3.40.50.620 14 198 1.1E-137 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS07300 7a08c3bf8035097e4ae6f39662cf9a95 418 Pfam PF07399 Putative Na+/H+ antiporter 6 418 4.2E-189 T 23-04-2016 IPR009978 Putative Na+/H+ antiporter MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 Gene3D G3DSA:3.30.70.1300 44 129 2.9E-29 T 23-04-2016 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 PANTHER PTHR30327 4 186 6.1E-59 T 23-04-2016 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 Gene3D G3DSA:3.40.1740.10 130 177 1.9E-33 T 23-04-2016 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 Gene3D G3DSA:3.40.1740.10 3 43 1.9E-33 T 23-04-2016 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 SUPERFAMILY SSF143456 5 186 4.19E-64 T 23-04-2016 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 Pfam PF02622 Uncharacterized ACR, COG1678 15 173 2.2E-50 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 4 186 38.275 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 MSIP34_RS03195 5555f0e09598911106dc442eaf91ba87 186 PANTHER PTHR30327:SF1 4 186 6.1E-59 T 23-04-2016 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 8.2E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.2E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 8.2E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 8.2E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 8.2E-26 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 SUPERFAMILY SSF47928 3 106 7.98E-25 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 Gene3D G3DSA:1.10.520.20 3 106 1.5E-31 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.959 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 3.3E-51 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PANTHER PTHR11910 8 177 1.5E-39 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 PANTHER PTHR11910:SF1 8 177 1.5E-39 T 23-04-2016 MSIP34_RS14125 de61d2ab9bcd08585c0d5d17b36682c0 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 176 1.3E-48 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 Gene3D G3DSA:3.30.460.10 45 190 6.9E-47 T 23-04-2016 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 PANTHER PTHR13734:SF47 32 322 1.3E-102 T 23-04-2016 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 Gene3D G3DSA:1.10.3090.10 191 421 1.1E-48 T 23-04-2016 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 14 448 35.9 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 218 278 3.9E-18 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 35 447 2.5E-151 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 PANTHER PTHR13734 32 322 1.3E-102 T 23-04-2016 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 SUPERFAMILY SSF81891 189 424 1.44E-52 T 23-04-2016 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 332 447 3.9E-45 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 SUPERFAMILY SSF81301 36 187 2.51E-37 T 23-04-2016 MSIP34_RS10875 013e05cdb33915cc8e5b0c7f39496956 455 Pfam PF01743 Poly A polymerase head domain 63 191 1.9E-34 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 MSIP34_RS11000 afb9aa53341c22ffdfa4a5e377f82b9a 166 SUPERFAMILY SSF142433 5 161 2.22E-55 T 23-04-2016 IPR008136 CinA, C-terminal MSIP34_RS11000 afb9aa53341c22ffdfa4a5e377f82b9a 166 PANTHER PTHR13939 5 166 7.9E-64 T 23-04-2016 MSIP34_RS11000 afb9aa53341c22ffdfa4a5e377f82b9a 166 Pfam PF02464 Competence-damaged protein 8 160 3.2E-56 T 23-04-2016 IPR008136 CinA, C-terminal MSIP34_RS11000 afb9aa53341c22ffdfa4a5e377f82b9a 166 Gene3D G3DSA:3.90.950.20 5 162 2.7E-56 T 23-04-2016 IPR008136 CinA, C-terminal MSIP34_RS11000 afb9aa53341c22ffdfa4a5e377f82b9a 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 157 5.2E-44 T 23-04-2016 IPR008136 CinA, C-terminal MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 Gene3D G3DSA:3.40.710.10 211 606 5.0E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 PANTHER PTHR32282:SF0 9 562 9.6E-120 T 23-04-2016 MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 19 682 9.9E-191 T 23-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 SUPERFAMILY SSF56601 192 608 7.37E-92 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 629 684 6.9E-10 T 23-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 SUPERFAMILY SSF53955 29 215 6.19E-42 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 Gene3D G3DSA:1.10.3810.10 47 210 7.8E-41 T 23-04-2016 MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 Pfam PF00912 Transglycosylase 35 211 2.2E-42 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 PANTHER PTHR32282 9 562 9.6E-120 T 23-04-2016 MSIP34_RS05495 f2e81ce2eee7978d07c106b4b79a68d5 758 Pfam PF00905 Penicillin binding protein transpeptidase domain 285 557 1.2E-18 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MSIP34_RS02860 dc3aff5fc943d22437ccd6ce4b5131c6 227 PANTHER PTHR11907:SF9 8 225 2.0E-51 T 23-04-2016 MSIP34_RS02860 dc3aff5fc943d22437ccd6ce4b5131c6 227 Pfam PF00156 Phosphoribosyl transferase domain 133 222 4.9E-9 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 MSIP34_RS02860 dc3aff5fc943d22437ccd6ce4b5131c6 227 Gene3D G3DSA:3.40.50.2020 54 224 5.9E-29 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS02860 dc3aff5fc943d22437ccd6ce4b5131c6 227 SUPERFAMILY SSF53271 53 224 4.2E-32 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS02860 dc3aff5fc943d22437ccd6ce4b5131c6 227 PANTHER PTHR11907 8 225 2.0E-51 T 23-04-2016 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 SUPERFAMILY SSF88946 4 109 2.31E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 Gene3D G3DSA:1.10.10.10 124 185 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 183 2.9E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 Pfam PF08281 Sigma-70, region 4 130 180 7.0E-10 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 Gene3D G3DSA:1.10.1740.10 7 118 1.0E-23 T 23-04-2016 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 Pfam PF04542 Sigma-70 region 2 29 93 2.9E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 PANTHER PTHR30173:SF31 2 184 1.9E-44 T 23-04-2016 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 SUPERFAMILY SSF88659 120 184 2.8E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS06675 b31844d6de72a2d97aa593a8944ca21b 187 PANTHER PTHR30173 2 184 1.9E-44 T 23-04-2016 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Gene3D G3DSA:3.40.50.720 6 92 9.9E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Pfam PF01225 Mur ligase family, catalytic domain 8 104 9.4E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 403 1.1E-20 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 SUPERFAMILY SSF53623 91 310 5.89E-71 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Gene3D G3DSA:3.90.190.20 314 461 4.1E-54 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Pfam PF08245 Mur ligase middle domain 110 292 1.6E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 PANTHER PTHR23135 1 454 1.6E-200 T 23-04-2016 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 SUPERFAMILY SSF53244 311 459 5.13E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 458 1.6E-168 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 465 43.064 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 PANTHER PTHR23135:SF5 1 454 1.6E-200 T 23-04-2016 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 Gene3D G3DSA:3.40.1190.10 94 313 8.6E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02350 018792fadfe5c3f1952185fd18a7287f 465 SUPERFAMILY SSF51984 6 92 1.02E-28 T 23-04-2016 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 SUPERFAMILY SSF46689 209 253 5.82E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 PANTHER PTHR11019 10 253 3.6E-70 T 23-04-2016 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 Gene3D G3DSA:1.10.10.60 210 253 4.9E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 Gene3D G3DSA:2.60.120.10 16 89 1.8E-9 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 PANTHER PTHR11019:SF138 10 253 3.6E-70 T 23-04-2016 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 SUPERFAMILY SSF51182 16 173 1.07E-18 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 SMART SM00342 172 254 5.5E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 Gene3D G3DSA:1.10.10.60 152 209 9.3E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 250 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 Pfam PF12833 Helix-turn-helix domain 179 253 6.6E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 Pfam PF02311 AraC-like ligand binding domain 21 110 1.7E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS13285 e63197e5785aa08bbd5419881471cf53 255 SUPERFAMILY SSF46689 155 206 4.93E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01240 b32d72d5bb1f668ef4e02bcea58e9696 356 PANTHER PTHR33529 1 356 7.9E-89 T 23-04-2016 MSIP34_RS01240 b32d72d5bb1f668ef4e02bcea58e9696 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 350 5.9E-74 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 MSIP34_RS01240 b32d72d5bb1f668ef4e02bcea58e9696 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 350 8.4E-123 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 MSIP34_RS01240 b32d72d5bb1f668ef4e02bcea58e9696 356 PANTHER PTHR33529:SF1 1 356 7.9E-89 T 23-04-2016 MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 SMART SM00530 31 86 2.4E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 SUPERFAMILY SSF47413 27 91 1.07E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 Pfam PF07883 Cupin domain 141 204 2.6E-14 T 23-04-2016 IPR013096 Cupin 2, conserved barrel MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 SUPERFAMILY SSF51182 71 207 1.06E-26 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 Gene3D G3DSA:1.10.260.40 28 128 7.0E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 Gene3D G3DSA:2.60.120.10 129 207 1.3E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 PANTHER PTHR10245:SF9 1 190 3.6E-36 T 23-04-2016 MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 Pfam PF01381 Helix-turn-helix 32 85 4.6E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MSIP34_RS12215 fce658203fd69a2556a37f4471264aa7 215 PANTHER PTHR10245 1 190 3.6E-36 T 23-04-2016 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 PANTHER PTHR11780 15 434 3.0E-205 T 23-04-2016 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 60 231 3.4E-45 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 SUPERFAMILY SSF142984 253 336 1.83E-24 T 23-04-2016 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 Gene3D G3DSA:3.10.560.10 254 286 7.9E-4 T 23-04-2016 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 354 365 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 SMART SM00928 341 386 1.1E-24 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 SUPERFAMILY SSF142019 19 252 2.48E-80 T 23-04-2016 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 SUPERFAMILY SSF140490 337 433 2.48E-37 T 23-04-2016 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 Pfam PF10531 SLBB domain 255 302 1.1E-13 T 23-04-2016 IPR019554 Soluble ligand binding domain MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 427 4.4E-183 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 344 424 4.2E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 MSIP34_RS03455 17dc63c52b709b6218ccbd268a1b6dfe 439 PANTHER PTHR11780:SF10 15 434 3.0E-205 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Gene3D G3DSA:3.30.390.30 455 577 1.1E-42 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Gene3D G3DSA:3.50.50.60 263 454 1.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 174 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 435 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 126 148 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 550 570 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 484 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 321 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 270 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 528 543 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 399 1.3E-69 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 467 572 3.1E-34 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 448 4.4E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 160 170 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PANTHER PTHR22912:SF160 111 579 1.1E-245 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 314 6.2E-40 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 146 6.2E-40 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 384 400 6.2E-40 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 413 435 6.2E-40 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 276 6.2E-40 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 125 580 4.1E-149 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 SUPERFAMILY SSF55424 466 586 1.07E-37 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 PANTHER PTHR22912 111 579 1.1E-245 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 SUPERFAMILY SSF51905 121 458 4.97E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 SUPERFAMILY SSF51230 3 96 2.3E-22 T 23-04-2016 IPR011053 Single hybrid motif MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Gene3D G3DSA:2.40.50.100 3 97 1.3E-20 T 23-04-2016 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Gene3D G3DSA:3.50.50.60 125 262 7.6E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS03355 f21e54083a387c52c6959e8194996985 592 Pfam PF00364 Biotin-requiring enzyme 6 75 2.7E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 SUPERFAMILY SSF53335 474 679 9.64E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 SUPERFAMILY SSF53335 730 817 9.64E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 Gene3D G3DSA:3.40.50.300 335 432 7.8E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 SUPERFAMILY SSF52540 26 194 4.01E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 Gene3D G3DSA:3.40.50.150 712 819 3.8E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 Gene3D G3DSA:3.40.50.150 477 660 3.8E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 SUPERFAMILY SSF52540 290 447 8.32E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 SUPERFAMILY SSF52540 135 179 8.32E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08435 4c5533684f189f6978e6f103519e9a9b 838 Pfam PF01555 DNA methylase 496 810 9.9E-10 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 MSIP34_RS00070 6e26596d94b65c974c600019a57fcc7c 155 Pfam PF00034 Cytochrome c 64 150 4.3E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS00070 6e26596d94b65c974c600019a57fcc7c 155 PIRSF PIRSF000008 1 155 1.6E-27 T 23-04-2016 IPR009153 Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 MSIP34_RS00070 6e26596d94b65c974c600019a57fcc7c 155 PANTHER PTHR33751 13 150 2.0E-13 T 23-04-2016 MSIP34_RS00070 6e26596d94b65c974c600019a57fcc7c 155 Gene3D G3DSA:1.10.760.10 43 152 1.3E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS00070 6e26596d94b65c974c600019a57fcc7c 155 PANTHER PTHR33751:SF1 13 150 2.0E-13 T 23-04-2016 MSIP34_RS00070 6e26596d94b65c974c600019a57fcc7c 155 SUPERFAMILY SSF46626 8 150 4.93E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1016 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 SUPERFAMILY SSF89550 6 264 2.75E-11 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Gene3D G3DSA:3.20.20.140 6 257 1.3E-18 T 23-04-2016 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 PANTHER PTHR32294 2 1149 0.0 T 23-04-2016 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Pfam PF01336 OB-fold nucleic acid binding domain 983 1058 7.1E-9 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 SMART SM00481 7 74 1.7E-22 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 730 4.2E-177 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 PANTHER PTHR32294:SF0 2 1149 0.0 T 23-04-2016 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Gene3D G3DSA:2.40.50.140 968 1061 3.3E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Gene3D G3DSA:1.10.150.280 829 874 1.7E-4 T 23-04-2016 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Pfam PF02811 PHP domain 8 174 1.5E-44 T 23-04-2016 IPR004013 PHP domain GO:0003824 MSIP34_RS08860 2caccaebe55434338360541a58b1fb81 1149 Pfam PF14579 Helix-hairpin-helix motif 803 892 3.8E-28 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS12865 e979ec7dd76b60669ec39d89532cdfe1 515 PANTHER PTHR10422 58 437 3.7E-35 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS12865 e979ec7dd76b60669ec39d89532cdfe1 515 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 466 1.7E-70 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS12865 e979ec7dd76b60669ec39d89532cdfe1 515 Gene3D G3DSA:1.20.210.10 35 487 3.8E-39 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS12865 e979ec7dd76b60669ec39d89532cdfe1 515 PANTHER PTHR10422:SF21 58 437 3.7E-35 T 23-04-2016 MSIP34_RS12865 e979ec7dd76b60669ec39d89532cdfe1 515 SUPERFAMILY SSF81442 49 491 1.31E-78 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SUPERFAMILY SSF50249 643 723 2.14E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SMART SM00316 641 724 1.4E-11 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 ProSitePatterns PS01175 Ribonuclease II family signature. 567 591 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SUPERFAMILY SSF50249 233 640 2.11E-147 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 Gene3D G3DSA:2.40.50.140 643 738 3.0E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SUPERFAMILY SSF50249 79 159 4.33E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SMART SM00955 272 600 9.6E-192 T 23-04-2016 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SMART SM00357 98 157 1.6E-12 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 PANTHER PTHR23355:SF9 12 810 1.5E-256 T 23-04-2016 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 Pfam PF08206 Ribonuclease B OB domain 99 156 5.1E-23 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 Hamap MF_01895 Ribonuclease R [rnr]. 50 724 57.252 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 SUPERFAMILY SSF50249 150 249 9.6E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 TIGRFAM TIGR02063 RNase_R: ribonuclease R 32 724 2.6E-263 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 Pfam PF00575 S1 RNA binding domain 640 721 3.4E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 Pfam PF00773 RNB domain 272 599 2.9E-109 T 23-04-2016 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 PANTHER PTHR23355 12 810 1.5E-256 T 23-04-2016 MSIP34_RS08725 180ce153537435461ce2c1cd9bb63195 814 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 89 722 1.3E-223 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 SUPERFAMILY SSF53067 199 380 1.77E-49 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:1.20.1270.10 531 618 4.3E-30 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PANTHER PTHR19375 19 608 2.7E-271 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:3.30.420.40 317 359 9.8E-32 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:3.30.420.40 205 237 9.8E-32 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:2.60.34.10 390 530 3.5E-51 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Pfam PF00012 Hsp70 protein 21 603 7.7E-181 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 SUPERFAMILY SSF53067 19 195 8.63E-53 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:3.90.640.10 238 312 3.9E-6 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 618 3.2E-277 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 SUPERFAMILY SSF100920 386 538 3.4E-48 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:3.30.420.40 132 204 8.0E-53 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:3.30.420.40 20 71 8.0E-53 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 210 220 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 332 348 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 151 171 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PRINTS PR00301 70kDa heat shock protein signature 363 383 2.6E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 SUPERFAMILY SSF100934 507 618 1.51E-32 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 PANTHER PTHR19375:SF176 19 608 2.7E-271 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Gene3D G3DSA:3.30.30.30 72 116 1.1E-8 T 23-04-2016 MSIP34_RS09370 16534c9492956d2061d2f6a34ab0a7cf 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 620 43.858 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 Gene3D G3DSA:3.30.9.10 114 171 4.0E-12 T 23-04-2016 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 Gene3D G3DSA:3.30.9.10 251 340 4.0E-12 T 23-04-2016 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 Pfam PF01266 FAD dependent oxidoreductase 31 378 1.7E-50 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 PANTHER PTHR13847:SF44 24 399 6.8E-60 T 23-04-2016 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 Gene3D G3DSA:3.50.50.60 341 399 1.1E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 Gene3D G3DSA:3.50.50.60 172 250 1.1E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 Gene3D G3DSA:3.50.50.60 24 108 1.1E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 PANTHER PTHR13847 24 399 6.8E-60 T 23-04-2016 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 SUPERFAMILY SSF51905 30 251 3.06E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 SUPERFAMILY SSF51905 341 398 3.06E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12210 f269ce2454a7584cddfb70f38205baa6 413 SUPERFAMILY SSF54373 265 341 6.93E-8 T 23-04-2016 MSIP34_RS10530 ab6bb572d917d4e32d9ecbb471585a6f 853 PANTHER PTHR38344:SF1 1 851 6.3E-225 T 23-04-2016 MSIP34_RS10530 ab6bb572d917d4e32d9ecbb471585a6f 853 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 39 827 1.7E-255 T 23-04-2016 IPR018752 Uncharacterised protein family UPF0753 MSIP34_RS10530 ab6bb572d917d4e32d9ecbb471585a6f 853 Hamap MF_01871 UPF0753 protein . 33 840 22.835 T 23-04-2016 IPR018752 Uncharacterised protein family UPF0753 MSIP34_RS10530 ab6bb572d917d4e32d9ecbb471585a6f 853 PANTHER PTHR38344 1 851 6.3E-225 T 23-04-2016 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.1E-15 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.1E-15 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.1E-15 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 68 1.8E-21 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 PANTHER PTHR33162:SF4 2 68 3.1E-18 T 23-04-2016 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 112 14.865 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 PANTHER PTHR33162 2 68 3.1E-18 T 23-04-2016 MSIP34_RS01440 bd31d303ebada8038e0e638d1c798472 118 Pfam PF02416 mttA/Hcf106 family 6 33 5.9E-9 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 MSIP34_RS12205 86471175cd9862152391d1d993107059 87 Pfam PF04267 Sarcosine oxidase, delta subunit family 3 80 9.9E-27 T 23-04-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 SMART SM00919 162 396 7.2E-122 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 Pfam PF00390 Malic enzyme, N-terminal domain 20 150 1.5E-26 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 Gene3D G3DSA:3.40.50.10380 6 159 5.5E-49 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 PANTHER PTHR23406 33 401 1.2E-142 T 23-04-2016 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 SMART SM01274 17 150 5.8E-77 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 SUPERFAMILY SSF51735 162 400 1.49E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 Gene3D G3DSA:3.40.50.720 160 402 8.1E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 SUPERFAMILY SSF53223 9 160 2.88E-52 T 23-04-2016 MSIP34_RS11075 39d07da41849bdac0cf42e565499966e 404 Pfam PF03949 Malic enzyme, NAD binding domain 164 356 4.6E-20 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 Gene3D G3DSA:1.20.5.470 375 397 7.1E-6 T 23-04-2016 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 SUPERFAMILY SSF52402 5 172 1.12E-50 T 23-04-2016 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 Pfam PF00764 Arginosuccinate synthase 8 399 1.2E-153 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 PANTHER PTHR11587 1 407 1.3E-230 T 23-04-2016 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 SUPERFAMILY SSF69864 178 402 3.66E-91 T 23-04-2016 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 6.3E-144 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 404 51.447 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 Gene3D G3DSA:3.40.50.620 5 161 8.3E-70 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 PANTHER PTHR11587:SF2 1 407 1.3E-230 T 23-04-2016 MSIP34_RS07925 4d67cf0b233ba6c71d150878100c75e1 407 Gene3D G3DSA:3.90.1260.10 162 360 2.1E-93 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS13440 1fd1e390f746a96d638efe493c4af659 233 Gene3D G3DSA:2.60.120.10 6 231 3.1E-73 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13440 1fd1e390f746a96d638efe493c4af659 233 Pfam PF02678 Pirin 12 119 4.7E-34 T 23-04-2016 IPR003829 Pirin, N-terminal domain MSIP34_RS13440 1fd1e390f746a96d638efe493c4af659 233 PANTHER PTHR13903:SF7 1 232 9.4E-109 T 23-04-2016 MSIP34_RS13440 1fd1e390f746a96d638efe493c4af659 233 SUPERFAMILY SSF51182 1 231 1.6E-75 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS13440 1fd1e390f746a96d638efe493c4af659 233 PANTHER PTHR13903 1 232 9.4E-109 T 23-04-2016 IPR012093 Pirin MSIP34_RS13440 1fd1e390f746a96d638efe493c4af659 233 PIRSF PIRSF006232 1 230 7.8E-55 T 23-04-2016 IPR012093 Pirin MSIP34_RS11245 786fba0d3edde1110318cf421b7c9b78 103 SUPERFAMILY SSF54736 18 102 4.45E-34 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MSIP34_RS11245 786fba0d3edde1110318cf421b7c9b78 103 Gene3D G3DSA:3.30.1390.10 5 102 4.5E-44 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MSIP34_RS11245 786fba0d3edde1110318cf421b7c9b78 103 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 20 98 5.3E-36 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 MSIP34_RS11245 786fba0d3edde1110318cf421b7c9b78 103 PANTHER PTHR33473 20 101 8.3E-37 T 23-04-2016 MSIP34_RS11245 786fba0d3edde1110318cf421b7c9b78 103 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 98 29.584 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 SMART SM00382 22 209 1.5E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 SUPERFAMILY SSF50331 236 356 1.14E-15 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 Pfam PF00005 ABC transporter 23 160 4.0E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 Gene3D G3DSA:3.40.50.300 24 224 4.7E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 SUPERFAMILY SSF52540 10 241 2.41E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 Pfam PF03459 TOBE domain 294 355 5.3E-9 T 23-04-2016 IPR005116 Transport-associated OB, type 1 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 Gene3D G3DSA:2.40.50.100 281 349 6.2E-13 T 23-04-2016 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 PANTHER PTHR24220:SF284 1 224 3.0E-86 T 23-04-2016 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 PANTHER PTHR24220:SF284 251 299 3.0E-86 T 23-04-2016 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 PANTHER PTHR24220 1 224 3.0E-86 T 23-04-2016 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 PANTHER PTHR24220 251 299 3.0E-86 T 23-04-2016 MSIP34_RS11695 ed635b5baf204d1a225e0e88d462a57e 360 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 353 2.3E-110 T 23-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 MSIP34_RS00680 c0835835b76b2dc574cd63a33621735f 324 Pfam PF00535 Glycosyl transferase family 2 4 126 8.9E-23 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS00680 c0835835b76b2dc574cd63a33621735f 324 Gene3D G3DSA:3.90.550.10 1 214 1.5E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00680 c0835835b76b2dc574cd63a33621735f 324 PANTHER PTHR22916:SF23 1 282 3.8E-31 T 23-04-2016 MSIP34_RS00680 c0835835b76b2dc574cd63a33621735f 324 SUPERFAMILY SSF53448 2 218 1.69E-39 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00680 c0835835b76b2dc574cd63a33621735f 324 PANTHER PTHR22916 1 282 3.8E-31 T 23-04-2016 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PANTHER PTHR11963 83 452 5.9E-103 T 23-04-2016 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 Gene3D G3DSA:3.40.630.10 158 481 9.4E-104 T 23-04-2016 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 SUPERFAMILY SSF53187 164 480 6.91E-96 T 23-04-2016 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 170 472 3.3E-96 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PANTHER PTHR11963:SF13 83 452 5.9E-103 T 23-04-2016 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PRINTS PR00481 Cytosol aminopeptidase signature 268 289 2.3E-39 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PRINTS PR00481 Cytosol aminopeptidase signature 246 263 2.3E-39 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PRINTS PR00481 Cytosol aminopeptidase signature 305 326 2.3E-39 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PRINTS PR00481 Cytosol aminopeptidase signature 327 347 2.3E-39 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS03370 97236d38724928ded7e93e9d6ad1d9ca 487 PRINTS PR00481 Cytosol aminopeptidase signature 355 370 2.3E-39 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 Gene3D G3DSA:3.30.70.250 123 193 9.9E-30 T 23-04-2016 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 Pfam PF00698 Acyl transferase domain 5 266 4.4E-30 T 23-04-2016 IPR014043 Acyl transferase MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 PIRSF PIRSF000446 1 308 3.7E-105 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 SUPERFAMILY SSF52151 3 119 4.19E-70 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 SUPERFAMILY SSF52151 187 305 4.19E-70 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 Gene3D G3DSA:3.40.366.10 194 294 7.9E-60 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 Gene3D G3DSA:3.40.366.10 2 119 7.9E-60 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 SUPERFAMILY SSF55048 127 194 5.89E-18 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 300 1.6E-28 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 288 1.2E-104 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 MSIP34_RS07055 dc67c9aedf6460cd9a8353febbdc3f5b 309 PANTHER PTHR10982 1 303 4.9E-133 T 23-04-2016 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 SUPERFAMILY SSF100879 252 352 1.26E-5 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 Pfam PF00817 impB/mucB/samB family 15 158 9.1E-28 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 Gene3D G3DSA:3.30.1490.100 254 366 3.9E-6 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 PANTHER PTHR11076:SF40 9 414 6.9E-149 T 23-04-2016 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 Pfam PF11799 impB/mucB/samB family C-terminal domain 251 366 3.8E-14 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 Pfam PF13438 Domain of unknown function (DUF4113) 379 429 5.3E-18 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 Gene3D G3DSA:1.10.150.20 178 242 1.3E-14 T 23-04-2016 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 PANTHER PTHR11076 9 414 6.9E-149 T 23-04-2016 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 Gene3D G3DSA:3.30.70.270 80 166 3.7E-20 T 23-04-2016 MSIP34_RS07550 5928c7771d96046334f37a8c92d3a8ca 430 SUPERFAMILY SSF56672 9 245 5.34E-58 T 23-04-2016 MSIP34_RS04240 3f679df36648515b9a7f72d93bedd6f9 355 PANTHER PTHR22893 1 353 1.5E-169 T 23-04-2016 MSIP34_RS04240 3f679df36648515b9a7f72d93bedd6f9 355 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 338 2.8E-72 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 MSIP34_RS04240 3f679df36648515b9a7f72d93bedd6f9 355 PANTHER PTHR22893:SF7 1 353 1.5E-169 T 23-04-2016 MSIP34_RS04240 3f679df36648515b9a7f72d93bedd6f9 355 Gene3D G3DSA:3.20.20.70 1 348 6.3E-130 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS04240 3f679df36648515b9a7f72d93bedd6f9 355 SUPERFAMILY SSF51395 1 349 4.23E-117 T 23-04-2016 MSIP34_RS09850 b45ea096d6bd312058f400399f639b2e 198 SUPERFAMILY SSF52218 1 178 6.99E-32 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS09850 b45ea096d6bd312058f400399f639b2e 198 PANTHER PTHR30543:SF8 1 193 4.0E-72 T 23-04-2016 MSIP34_RS09850 b45ea096d6bd312058f400399f639b2e 198 PANTHER PTHR30543 1 193 4.0E-72 T 23-04-2016 MSIP34_RS09850 b45ea096d6bd312058f400399f639b2e 198 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 6 178 2.0E-71 T 23-04-2016 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 MSIP34_RS09850 b45ea096d6bd312058f400399f639b2e 198 Pfam PF03358 NADPH-dependent FMN reductase 6 150 2.7E-32 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 MSIP34_RS09850 b45ea096d6bd312058f400399f639b2e 198 Gene3D G3DSA:3.40.50.360 1 177 3.9E-34 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 PANTHER PTHR30004:SF5 2 327 7.1E-172 T 23-04-2016 MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 SUPERFAMILY SSF53659 6 327 8.64E-109 T 23-04-2016 MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 Gene3D G3DSA:3.40.718.10 4 327 5.3E-131 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 PANTHER PTHR30004 2 327 7.1E-172 T 23-04-2016 MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 321 3.0E-108 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 324 1.1E-125 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 MSIP34_RS02935 256df2de2feb40bf55c272543790aa4a 332 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 4 325 34.895 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 SUPERFAMILY SSF52172 1 107 2.56E-28 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 Pfam PF01339 CheB methylesterase 166 343 9.7E-60 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 Gene3D G3DSA:3.40.50.180 162 349 4.9E-80 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 PANTHER PTHR24421 1 358 6.2E-157 T 23-04-2016 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 Pfam PF00072 Response regulator receiver domain 5 107 3.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 PANTHER PTHR24421:SF21 1 358 6.2E-157 T 23-04-2016 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 PIRSF PIRSF000876 1 353 1.3E-137 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 349 40.412 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 SUPERFAMILY SSF52738 163 348 1.05E-70 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 Gene3D G3DSA:3.40.50.2300 2 107 2.0E-28 T 23-04-2016 MSIP34_RS04175 8df66f4b0f4a35015b6c51d9c34da667 358 SMART SM00448 3 122 6.4E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 PIRSF PIRSF016578 5 399 1.0E-24 T 23-04-2016 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 SUPERFAMILY SSF47203 239 378 9.99E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 Gene3D G3DSA:2.40.110.10 149 217 2.5E-15 T 23-04-2016 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 SUPERFAMILY SSF56645 22 225 6.68E-38 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 Gene3D G3DSA:1.10.540.10 9 118 2.8E-29 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 23 122 4.8E-12 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 Gene3D G3DSA:1.20.140.10 218 401 7.3E-57 T 23-04-2016 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 PANTHER PTHR10909 18 383 5.5E-135 T 23-04-2016 MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 377 2.8E-12 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain MSIP34_RS09895 f543ec27cd8eedcfd5a6a1c4cf1d2752 402 PANTHER PTHR10909:SF275 18 383 5.5E-135 T 23-04-2016 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 SMART SM00881 4 100 3.6E-36 T 23-04-2016 IPR003781 CoA-binding GO:0048037 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 Pfam PF02629 CoA binding domain 6 99 8.2E-31 T 23-04-2016 IPR003781 CoA-binding GO:0048037 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 SUPERFAMILY SSF52210 123 289 9.94E-54 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 PIRSF PIRSF001553 1 291 4.1E-133 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 Gene3D G3DSA:3.40.50.720 3 119 8.3E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 286 4.5E-144 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 Gene3D G3DSA:3.40.50.261 120 286 6.4E-75 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 PANTHER PTHR11117 1 291 1.5E-190 T 23-04-2016 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 Pfam PF00549 CoA-ligase 151 271 4.0E-17 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 SUPERFAMILY SSF51735 1 122 8.07E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-37 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-37 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-37 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS04620 0ff19fb39188f90312df4ef861005c1b 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-37 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 MSIP34_RS03120 0d59affd0be68bc40975e3569589e07e 152 PANTHER PTHR22769 1 139 1.5E-23 T 23-04-2016 MSIP34_RS03120 0d59affd0be68bc40975e3569589e07e 152 SUPERFAMILY SSF55811 5 144 2.84E-27 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS03120 0d59affd0be68bc40975e3569589e07e 152 PANTHER PTHR22769:SF14 1 139 1.5E-23 T 23-04-2016 MSIP34_RS03120 0d59affd0be68bc40975e3569589e07e 152 Gene3D G3DSA:3.90.79.10 2 144 4.4E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS03120 0d59affd0be68bc40975e3569589e07e 152 Pfam PF00293 NUDIX domain 9 115 8.9E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 6.6E-151 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PANTHER PTHR22855 1 318 3.6E-127 T 23-04-2016 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 SUPERFAMILY SSF52096 6 316 2.49E-102 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PANTHER PTHR22855:SF42 1 318 3.6E-127 T 23-04-2016 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 Gene3D G3DSA:3.90.226.10 58 271 3.9E-48 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.22E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.22E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.22E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.22E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.22E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.22E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 148 1.2E-66 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS08855 adaeffc4c08d5ba754175cc7b39f9c1b 322 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.1 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 347 487 2.3E-59 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 Pfam PF01467 Cytidylyltransferase-like 360 453 1.6E-13 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 Gene3D G3DSA:3.40.1190.20 21 325 2.6E-62 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 SUPERFAMILY SSF53613 21 316 2.96E-57 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 PANTHER PTHR10584 21 349 6.4E-106 T 23-04-2016 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 488 39.873 T 23-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 57 81 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 Pfam PF00294 pfkB family carbohydrate kinase 21 314 3.6E-46 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 Gene3D G3DSA:3.40.50.620 355 475 6.5E-33 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 PANTHER PTHR10584:SF159 21 349 6.4E-106 T 23-04-2016 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 357 419 9.8E-12 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 20 324 3.2E-111 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 MSIP34_RS09565 c278100aa05c189c3315507bc9666e38 488 SUPERFAMILY SSF52374 355 485 9.07E-21 T 23-04-2016 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 PANTHER PTHR21090 1 359 9.5E-198 T 23-04-2016 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 43.301 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 Gene3D G3DSA:1.20.1090.10 173 355 1.9E-66 T 23-04-2016 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 SUPERFAMILY SSF56796 3 355 1.26E-120 T 23-04-2016 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 Pfam PF01761 3-dehydroquinate synthase 67 324 8.5E-108 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 Gene3D G3DSA:3.40.50.1970 2 172 1.0E-70 T 23-04-2016 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 3.7E-118 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS12575 ff148da0fb47f172519ceab585d229b3 359 PIRSF PIRSF001455 3 358 6.0E-108 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 PANTHER PTHR24423 52 428 4.3E-125 T 23-04-2016 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Gene3D G3DSA:1.10.287.130 196 257 2.7E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 SMART SM00387 316 428 3.2E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Gene3D G3DSA:3.30.565.10 258 427 4.2E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 3.0E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 8.8E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 SUPERFAMILY SSF55785 88 151 1.03E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 PANTHER PTHR24423:SF554 52 428 4.3E-125 T 23-04-2016 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 SMART SM00091 98 164 3.9E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 2.7E-131 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Gene3D G3DSA:3.30.450.20 93 151 4.3E-9 T 23-04-2016 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 SUPERFAMILY SSF55874 261 426 5.89E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Pfam PF13188 PAS domain 99 148 2.0E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 SUPERFAMILY SSF47384 193 271 3.73E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 426 2.1E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 SMART SM00388 205 272 4.7E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11365 2ecfbe1d83d33a7dc7ef0d33d2a6246b 444 Pfam PF11808 Domain of unknown function (DUF3329) 6 90 8.5E-18 T 23-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 432 1.8E-26 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 PANTHER PTHR11649:SF5 1 432 1.2E-139 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 SMART SM00382 1 142 0.08 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 SMART SM00382 176 319 0.082 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 432 2.9E-172 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 7.9E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 7.9E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Gene3D G3DSA:3.40.50.300 175 359 2.0E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Gene3D G3DSA:3.40.50.300 2 171 1.9E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 340 3.1E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 7.5E-18 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 PANTHER PTHR11649 1 432 1.2E-139 T 23-04-2016 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Gene3D G3DSA:3.30.300.20 360 434 2.1E-23 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Pfam PF01926 50S ribosome-binding GTPase 179 297 1.9E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Pfam PF01926 50S ribosome-binding GTPase 5 120 3.7E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 PIRSF PIRSF006485 1 441 5.0E-173 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 Hamap MF_00195 GTPase Der [der]. 2 436 38.001 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 SUPERFAMILY SSF52540 3 167 4.96E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08665 c4f7c1e8f3d05b15cdce0c91d519ca25 523 SUPERFAMILY SSF52540 138 439 9.76E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 64 79 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 Pfam PF00009 Elongation factor Tu GTP binding domain 11 198 1.9E-41 T 23-04-2016 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 SUPERFAMILY SSF52540 8 232 9.33E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 PANTHER PTHR23115 15 316 1.5E-59 T 23-04-2016 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 PRINTS PR00315 GTP-binding elongation factor signature 91 101 5.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 PRINTS PR00315 GTP-binding elongation factor signature 144 153 5.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 PRINTS PR00315 GTP-binding elongation factor signature 71 79 5.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 PRINTS PR00315 GTP-binding elongation factor signature 107 118 5.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 Gene3D G3DSA:2.40.30.10 227 339 2.5E-21 T 23-04-2016 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 SUPERFAMILY SSF50447 227 319 3.53E-18 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 Gene3D G3DSA:3.40.50.300 7 219 4.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 11 425 9.4E-170 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 Gene3D G3DSA:2.40.30.10 340 426 1.8E-10 T 23-04-2016 MSIP34_RS07745 330e3037ee8bd6063d9ac97508c367a2 427 SUPERFAMILY SSF50465 324 426 7.19E-33 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 Gene3D G3DSA:3.20.70.20 508 556 3.4E-121 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 Gene3D G3DSA:3.20.70.20 609 651 3.4E-121 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 Gene3D G3DSA:3.20.70.20 4 219 3.4E-121 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 Gene3D G3DSA:3.20.70.20 285 443 3.4E-121 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 SUPERFAMILY SSF51998 13 219 1.28E-173 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 SUPERFAMILY SSF51998 285 443 1.28E-173 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 SUPERFAMILY SSF51998 508 690 1.28E-173 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 21 92 2.6E-6 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PANTHER PTHR11573:SF3 22 467 1.8E-194 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PANTHER PTHR11573:SF3 486 658 1.8E-194 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PANTHER PTHR11573 22 467 1.8E-194 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PANTHER PTHR11573 486 658 1.8E-194 T 23-04-2016 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 23 658 4.4E-172 T 23-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 102 650 2.2E-144 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 395 417 2.0E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 423 446 2.0E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 510 537 2.0E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 357 380 2.0E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 177 196 2.0E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS13220 33366c2cb123b13dd2fde381e35eca1d 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 319 330 2.0E-17 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.335 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 SUPERFAMILY SSF52540 96 381 3.44E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 4.0E-15 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 PIRSF PIRSF039088 1 513 1.9E-237 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 SUPERFAMILY SSF50615 10 94 8.24E-30 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Gene3D G3DSA:2.40.30.20 1 93 8.0E-35 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.8E-75 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 6.1E-42 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Gene3D G3DSA:3.40.50.300 94 382 1.1E-114 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 SUPERFAMILY SSF47917 383 510 8.89E-43 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 PANTHER PTHR15184 1 497 6.5E-291 T 23-04-2016 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 PANTHER PTHR15184:SF3 1 497 6.5E-291 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 Gene3D G3DSA:1.20.150.20 383 510 2.3E-44 T 23-04-2016 MSIP34_RS14120 f00fc720c2b935fabc6ba10b81f75977 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 511 8.6E-247 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 PANTHER PTHR11632:SF27 2 525 4.3E-264 T 23-04-2016 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 Pfam PF00890 FAD binding domain 5 383 5.9E-106 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 Gene3D G3DSA:3.50.50.60 2 234 1.2E-103 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 Gene3D G3DSA:3.50.50.60 340 400 1.2E-103 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 Gene3D G3DSA:3.90.700.10 235 339 6.0E-40 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 PANTHER PTHR11632 2 525 4.3E-264 T 23-04-2016 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.3E-7 T 23-04-2016 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-7 T 23-04-2016 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 SUPERFAMILY SSF51905 347 437 1.01E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 SUPERFAMILY SSF51905 2 246 1.01E-75 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 SUPERFAMILY SSF46977 414 515 4.45E-31 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 Gene3D G3DSA:1.20.58.100 405 510 1.6E-33 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 SUPERFAMILY SSF56425 229 343 8.97E-44 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 Pfam PF02910 Fumarate reductase flavoprotein C-term 431 510 5.5E-16 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 MSIP34_RS09045 e15bafd380ec5e259164180e60e28d35 552 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 509 1.6E-204 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 MSIP34_RS10465 5ea853a98f5ec7e746b8650607ec701f 287 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 1 250 7.3E-19 T 23-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.19 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 Pfam PF01649 Ribosomal protein S20 2 84 5.2E-26 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 86 3.0E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 SUPERFAMILY SSF46992 3 86 8.11E-29 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 Gene3D G3DSA:1.20.58.110 1 86 6.9E-29 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 PANTHER PTHR33398 1 87 1.8E-31 T 23-04-2016 MSIP34_RS02640 cabd3c79b362bf7f82649ffd3caf3e81 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.2E-26 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS05995 d558ef2f3b74ed4e5f9a55e6c2cca173 164 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 160 1.4E-43 T 23-04-2016 MSIP34_RS05995 d558ef2f3b74ed4e5f9a55e6c2cca173 164 PANTHER PTHR10371 11 159 1.0E-42 T 23-04-2016 MSIP34_RS05995 d558ef2f3b74ed4e5f9a55e6c2cca173 164 Gene3D G3DSA:3.40.30.10 81 159 9.0E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS05995 d558ef2f3b74ed4e5f9a55e6c2cca173 164 PIRSF PIRSF000216 7 163 2.0E-47 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 MSIP34_RS05995 d558ef2f3b74ed4e5f9a55e6c2cca173 164 SUPERFAMILY SSF52833 12 160 3.35E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 Pfam PF13531 Bacterial extracellular solute-binding protein 41 287 8.1E-44 T 23-04-2016 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 PANTHER PTHR30368:SF2 22 336 3.5E-188 T 23-04-2016 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 152 160 - T 23-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 PANTHER PTHR30368 22 336 3.5E-188 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 SUPERFAMILY SSF53850 26 334 2.14E-94 T 23-04-2016 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 Gene3D G3DSA:3.40.190.10 187 302 2.3E-30 T 23-04-2016 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 Gene3D G3DSA:3.40.190.10 27 174 9.9E-52 T 23-04-2016 MSIP34_RS10805 6655136f6c5142d8f5cd84c47316e0f3 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 24 333 4.2E-154 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 MSIP34_RS06545 1288852639d614d67a540895d8cdf359 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 140 6.7E-45 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 MSIP34_RS06545 1288852639d614d67a540895d8cdf359 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 134 3.1E-40 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 MSIP34_RS06545 1288852639d614d67a540895d8cdf359 155 PANTHER PTHR33540 1 153 2.9E-40 T 23-04-2016 MSIP34_RS06545 1288852639d614d67a540895d8cdf359 155 Gene3D G3DSA:3.40.50.300 5 152 8.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06545 1288852639d614d67a540895d8cdf359 155 SUPERFAMILY SSF52540 25 127 4.86E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 PANTHER PTHR23089:SF2 4 105 7.8E-39 T 23-04-2016 MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 Pfam PF11969 Scavenger mRNA decapping enzyme C-term binding 5 103 9.3E-24 T 23-04-2016 MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 PANTHER PTHR23089 4 105 7.8E-39 T 23-04-2016 IPR001310 Histidine triad (HIT) protein MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 PRINTS PR00332 Histidine triad family signature 27 45 1.7E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 PRINTS PR00332 Histidine triad family signature 93 103 1.7E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 PRINTS PR00332 Histidine triad family signature 6 22 1.7E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 23-04-2016 IPR019808 Histidine triad, conserved site MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 Gene3D G3DSA:3.30.428.10 2 105 4.2E-36 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 MSIP34_RS01430 3841e22701e6f6ee886596245cd3eb76 112 SUPERFAMILY SSF54197 2 105 7.23E-35 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 PANTHER PTHR11815 1 391 1.7E-221 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 PIRSF PIRSF001554 1 388 1.4E-153 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 9.5E-164 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 Pfam PF08442 ATP-grasp domain 2 203 4.2E-75 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 Gene3D G3DSA:3.30.1490.20 22 95 3.9E-31 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 PANTHER PTHR11815:SF1 1 391 1.7E-221 T 23-04-2016 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 Gene3D G3DSA:3.40.50.261 242 383 6.6E-65 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 Pfam PF00549 CoA-ligase 262 382 2.0E-25 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.255 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 Gene3D G3DSA:3.30.470.20 96 239 3.8E-53 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 SUPERFAMILY SSF52210 241 385 1.02E-52 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 SUPERFAMILY SSF56059 1 238 3.73E-79 T 23-04-2016 MSIP34_RS04615 725b4c8513455e138ba4d3593b2014ee 392 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 MSIP34_RS07100 c84dc5cbd8ff37580a0de11b50e3b7c6 188 Gene3D G3DSA:3.30.420.10 5 145 3.7E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07100 c84dc5cbd8ff37580a0de11b50e3b7c6 188 Hamap MF_00052_B Ribonuclease HII [rnhB]. 5 184 35.619 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 MSIP34_RS07100 c84dc5cbd8ff37580a0de11b50e3b7c6 188 PANTHER PTHR10954 1 188 1.6E-66 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 MSIP34_RS07100 c84dc5cbd8ff37580a0de11b50e3b7c6 188 SUPERFAMILY SSF53098 3 188 3.49E-64 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07100 c84dc5cbd8ff37580a0de11b50e3b7c6 188 Pfam PF01351 Ribonuclease HII 7 183 2.4E-36 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain MSIP34_RS06460 642444340953d998b8c6e44294ffe5e9 120 Pfam PF00355 Rieske [2Fe-2S] domain 35 98 5.4E-6 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS06460 642444340953d998b8c6e44294ffe5e9 120 PANTHER PTHR40261:SF2 35 117 2.8E-21 T 23-04-2016 MSIP34_RS06460 642444340953d998b8c6e44294ffe5e9 120 Gene3D G3DSA:2.102.10.10 8 116 2.3E-14 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS06460 642444340953d998b8c6e44294ffe5e9 120 SUPERFAMILY SSF50022 8 115 6.94E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS06460 642444340953d998b8c6e44294ffe5e9 120 PANTHER PTHR40261 35 117 2.8E-21 T 23-04-2016 MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 Pfam PF12838 4Fe-4S dicluster domain 63 116 7.4E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 SUPERFAMILY SSF54862 37 144 3.93E-24 T 23-04-2016 MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 139 5.4E-46 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 Gene3D G3DSA:1.10.1060.10 15 129 2.9E-22 T 23-04-2016 MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 PANTHER PTHR10849 5 163 7.5E-86 T 23-04-2016 MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 PANTHER PTHR10849:SF20 5 163 7.5E-86 T 23-04-2016 MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 103 114 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS03470 25d18aa61daf2b96feeda6b3b5e8fab4 163 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 11 160 27.89 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 SUPERFAMILY SSF142984 340 420 1.83E-19 T 23-04-2016 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 SUPERFAMILY SSF52833 3 85 9.62E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 427 508 5.2E-30 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 438 449 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 SUPERFAMILY SSF142019 96 336 2.62E-85 T 23-04-2016 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 Gene3D G3DSA:3.40.30.10 8 82 3.8E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 144 315 5.3E-45 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 SUPERFAMILY SSF140490 422 507 2.22E-29 T 23-04-2016 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 PANTHER PTHR11780 1 507 8.7E-234 T 23-04-2016 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 PANTHER PTHR11780:SF0 1 507 8.7E-234 T 23-04-2016 MSIP34_RS06000 fb58d9f1ed55297781af43b798f60939 516 SMART SM00928 425 470 5.2E-19 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 53.27 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 SUPERFAMILY SSF53187 292 373 1.26E-63 T 23-04-2016 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 SUPERFAMILY SSF53187 3 178 1.26E-63 T 23-04-2016 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.0E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 SUPERFAMILY SSF55031 179 288 8.97E-31 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 8.7E-169 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 Gene3D G3DSA:3.30.70.360 188 289 4.7E-36 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 PANTHER PTHR11014:SF106 5 374 1.6E-81 T 23-04-2016 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 Pfam PF01546 Peptidase family M20/M25/M40 63 370 1.3E-43 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 PANTHER PTHR11014 5 374 1.6E-81 T 23-04-2016 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 Gene3D G3DSA:3.40.630.10 316 374 1.1E-71 T 23-04-2016 MSIP34_RS04740 45b07317d2bf39576a3b7a0a0f4c7671 375 Gene3D G3DSA:3.40.630.10 2 187 1.1E-71 T 23-04-2016 MSIP34_RS01080 c0ee421d9b350ac3ede3e314fe10b63d 252 PANTHER PTHR37481:SF1 6 193 1.1E-20 T 23-04-2016 MSIP34_RS01080 c0ee421d9b350ac3ede3e314fe10b63d 252 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 187 2.1E-52 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 MSIP34_RS01080 c0ee421d9b350ac3ede3e314fe10b63d 252 Gene3D G3DSA:2.60.450.10 93 184 3.3E-6 T 23-04-2016 MSIP34_RS01080 c0ee421d9b350ac3ede3e314fe10b63d 252 PANTHER PTHR37481 6 193 1.1E-20 T 23-04-2016 MSIP34_RS01080 c0ee421d9b350ac3ede3e314fe10b63d 252 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 11 187 8.1E-44 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related MSIP34_RS02250 45b4bbde7e4118b91935b0fb0176c14d 262 Gene3D G3DSA:3.20.20.450 27 255 3.9E-27 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02250 45b4bbde7e4118b91935b0fb0176c14d 262 SMART SM00052 20 260 1.5E-6 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02250 45b4bbde7e4118b91935b0fb0176c14d 262 PANTHER PTHR33121 1 257 6.1E-14 T 23-04-2016 MSIP34_RS02250 45b4bbde7e4118b91935b0fb0176c14d 262 Pfam PF00563 EAL domain 34 255 9.5E-39 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02250 45b4bbde7e4118b91935b0fb0176c14d 262 PANTHER PTHR33121:SF14 1 257 6.1E-14 T 23-04-2016 MSIP34_RS02250 45b4bbde7e4118b91935b0fb0176c14d 262 SUPERFAMILY SSF141868 27 255 6.28E-33 T 23-04-2016 IPR001633 EAL domain MSIP34_RS04290 673122316c4f964516380d6552c018da 639 Pfam PF00263 Bacterial type II and III secretion system protein 399 562 4.9E-41 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 MSIP34_RS04290 673122316c4f964516380d6552c018da 639 SUPERFAMILY SSF48452 15 160 1.33E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04290 673122316c4f964516380d6552c018da 639 SMART SM00965 204 255 4.6E-5 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS04290 673122316c4f964516380d6552c018da 639 Pfam PF07660 Secretin and TonB N terminus short domain 204 254 2.4E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PANTHER PTHR30332:SF7 180 578 1.4E-77 T 23-04-2016 MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PANTHER PTHR30332 180 578 1.4E-77 T 23-04-2016 MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 326 336 6.3E-13 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 395 419 6.3E-13 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 440 6.3E-13 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 550 564 6.3E-13 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS04290 673122316c4f964516380d6552c018da 639 PRINTS PR00811 Bacterial general secretion pathway protein D signature 527 545 6.3E-13 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS04290 673122316c4f964516380d6552c018da 639 Gene3D G3DSA:1.25.40.10 20 167 9.1E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 5 160 4.4E-61 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 SUPERFAMILY SSF46557 5 80 3.79E-24 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 158 26.287 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 SUPERFAMILY SSF54534 86 159 2.62E-21 T 23-04-2016 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 Pfam PF03449 Transcription elongation factor, N-terminal 6 76 8.3E-22 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 PIRSF PIRSF006092 1 161 2.8E-43 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 159 1.7E-24 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 Gene3D G3DSA:3.10.50.30 81 159 1.2E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 PANTHER PTHR30437:SF6 6 164 3.0E-65 T 23-04-2016 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 PANTHER PTHR30437 6 164 3.0E-65 T 23-04-2016 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 Hamap MF_00930 Transcription elongation factor GreB [greB]. 3 160 49.863 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 Gene3D G3DSA:1.10.287.180 4 77 2.0E-21 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MSIP34_RS06300 c1cb428133b51737020973152080af66 164 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 MSIP34_RS09120 f12107dd20cb26e2506c3ebacd5b6339 286 Pfam PF00263 Bacterial type II and III secretion system protein 161 264 4.1E-8 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 MSIP34_RS09120 f12107dd20cb26e2506c3ebacd5b6339 286 Pfam PF03958 Bacterial type II/III secretion system short domain 37 94 1.1E-7 T 23-04-2016 IPR005644 NolW-like MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 PIRSF PIRSF000239 1 188 6.8E-46 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 PANTHER PTHR10681:SF121 4 188 2.8E-88 T 23-04-2016 MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 Gene3D G3DSA:3.40.30.10 5 184 8.8E-59 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 183 1.6E-5 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 PANTHER PTHR10681 4 188 2.8E-88 T 23-04-2016 MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 3 188 2.5E-97 T 23-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 Pfam PF00578 AhpC/TSA family 6 133 3.0E-30 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS01135 cb4387273d05e9d5a534ffb3f9ea6aa8 188 SUPERFAMILY SSF52833 2 187 2.07E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 SUPERFAMILY SSF88946 11 78 5.49E-11 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 PANTHER PTHR30173 10 170 3.4E-29 T 23-04-2016 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 Gene3D G3DSA:1.10.1740.10 10 83 2.9E-9 T 23-04-2016 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 SUPERFAMILY SSF88659 95 170 1.18E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 PANTHER PTHR30173:SF9 10 170 3.4E-29 T 23-04-2016 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 Pfam PF08281 Sigma-70, region 4 115 166 6.7E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 Pfam PF04542 Sigma-70 region 2 16 81 4.0E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 Gene3D G3DSA:1.10.10.10 110 170 1.2E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02135 8026f9dda84b52bf57d8509f33ff9e3e 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 166 4.9E-18 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 SUPERFAMILY SSF52402 2 241 6.17E-58 T 23-04-2016 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 358 39.519 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 Gene3D G3DSA:3.40.50.620 2 208 1.6E-95 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 Pfam PF03054 tRNA methyl transferase 4 357 1.1E-134 T 23-04-2016 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 Gene3D G3DSA:2.40.30.10 281 360 5.8E-28 T 23-04-2016 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 357 8.9E-133 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 Gene3D G3DSA:2.30.30.280 210 277 1.8E-33 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 PANTHER PTHR11933:SF10 1 361 2.6E-188 T 23-04-2016 MSIP34_RS03115 c37df40d43c7867bbf0753be696021f5 361 PANTHER PTHR11933 1 361 2.6E-188 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Gene3D G3DSA:3.40.1160.10 100 372 1.2E-65 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 PANTHER PTHR30602:SF3 83 523 1.1E-178 T 23-04-2016 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 PIRSF PIRSF000423 75 523 6.9E-189 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Pfam PF13560 Helix-turn-helix domain 3 61 2.9E-10 T 23-04-2016 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Pfam PF00696 Amino acid kinase family 102 349 1.8E-23 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 SUPERFAMILY SSF55729 379 499 3.55E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 SUPERFAMILY SSF53633 78 374 2.79E-62 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 78 523 198.89 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Pfam PF00583 Acetyltransferase (GNAT) family 422 494 2.0E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Gene3D G3DSA:3.40.630.30 379 520 2.0E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 SMART SM00530 6 61 2.2E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 84 523 1.6E-176 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 SUPERFAMILY SSF47413 1 64 4.5E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 Gene3D G3DSA:1.10.260.40 1 68 3.7E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS02435 51a66bab1709fd1c258a02eb31a04532 523 PANTHER PTHR30602 83 523 1.1E-178 T 23-04-2016 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 Pfam PF16331 TolA binding protein trimerisation 58 123 2.7E-14 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 Pfam PF13174 Tetratricopeptide repeat 220 252 2.0E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 SUPERFAMILY SSF48452 150 254 2.33E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 262 3.0E-26 T 23-04-2016 IPR014162 Tol-Pal system, YbgF MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 Pfam PF13432 Tetratricopeptide repeat 149 216 1.9E-8 T 23-04-2016 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 SMART SM00028 182 215 0.57 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 SMART SM00028 219 252 34.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 PANTHER PTHR26312:SF74 156 263 3.8E-12 T 23-04-2016 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 PANTHER PTHR26312 156 263 3.8E-12 T 23-04-2016 MSIP34_RS12055 31ef3ec2c7e6600c3daefce778ee7e3f 270 Gene3D G3DSA:1.25.40.10 151 253 8.9E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS09975 7d59fea111b59b2e8dc44b356471638c 218 Pfam PF04403 Paraquat-inducible protein A 62 214 5.5E-54 T 23-04-2016 IPR007498 Paraquat-inducible protein A MSIP34_RS09975 7d59fea111b59b2e8dc44b356471638c 218 PANTHER PTHR30462:SF3 9 218 1.1E-60 T 23-04-2016 MSIP34_RS09975 7d59fea111b59b2e8dc44b356471638c 218 PANTHER PTHR30462 9 218 1.1E-60 T 23-04-2016 MSIP34_RS02410 70bb2f4d8e6430c83bede2264af8eefd 186 SUPERFAMILY SSF46689 3 70 2.69E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS02410 70bb2f4d8e6430c83bede2264af8eefd 186 Gene3D G3DSA:1.10.357.10 2 185 3.1E-36 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS02410 70bb2f4d8e6430c83bede2264af8eefd 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 52 6.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS02410 70bb2f4d8e6430c83bede2264af8eefd 186 PANTHER PTHR30055 4 184 8.4E-54 T 23-04-2016 MSIP34_RS02410 70bb2f4d8e6430c83bede2264af8eefd 186 PANTHER PTHR30055:SF58 4 184 8.4E-54 T 23-04-2016 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 SMART SM00859 3 122 5.7E-27 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 122 5.7E-22 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 PANTHER PTHR10174 201 369 2.5E-148 T 23-04-2016 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 PANTHER PTHR10174 103 179 2.5E-148 T 23-04-2016 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 SUPERFAMILY SSF55347 134 355 2.55E-75 T 23-04-2016 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 3 368 2.9E-189 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 PIRSF PIRSF000148 1 370 1.5E-64 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 4.9E-55 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 SUPERFAMILY SSF51735 1 147 1.61E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 32.83 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 Gene3D G3DSA:3.40.50.720 1 142 1.0E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 Gene3D G3DSA:3.30.360.10 143 351 2.3E-71 T 23-04-2016 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 PANTHER PTHR10174:SF116 201 369 2.5E-148 T 23-04-2016 MSIP34_RS07885 07b4a537d5873d830bd8cc442b1094ff 370 PANTHER PTHR10174:SF116 103 179 2.5E-148 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SUPERFAMILY SSF55785 19 117 7.18E-17 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SMART SM00267 240 412 1.2E-43 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SMART SM00091 130 195 2.1E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SMART SM00091 4 70 5.6E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SUPERFAMILY SSF55073 256 413 1.49E-44 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SUPERFAMILY SSF55785 114 235 6.28E-11 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SUPERFAMILY SSF141868 430 672 1.57E-68 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 408 5.3E-41 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 410 8.6E-37 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Pfam PF00563 EAL domain 430 665 1.8E-59 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 SMART SM00052 424 670 2.1E-63 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Pfam PF08448 PAS fold 137 242 8.0E-6 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 PANTHER PTHR33121:SF10 374 671 4.7E-50 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 PANTHER PTHR33121:SF10 47 73 4.7E-50 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 PANTHER PTHR33121 374 671 4.7E-50 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 PANTHER PTHR33121 47 73 4.7E-50 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Gene3D G3DSA:3.30.70.270 253 414 1.6E-50 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Gene3D G3DSA:3.30.450.20 128 241 2.8E-13 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 125 2.4E-15 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Pfam PF13426 PAS domain 22 117 2.3E-10 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Gene3D G3DSA:3.30.450.20 10 117 5.7E-16 T 23-04-2016 MSIP34_RS05060 edc9db69d9c90285b90fb935233b1974 674 Gene3D G3DSA:3.20.20.450 427 671 9.9E-69 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 Pfam PF01047 MarR family 39 97 6.2E-17 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 PANTHER PTHR33164:SF5 7 146 8.5E-47 T 23-04-2016 MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 PANTHER PTHR33164 7 146 8.5E-47 T 23-04-2016 MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.4E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 SUPERFAMILY SSF46785 11 144 1.13E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 Gene3D G3DSA:1.10.10.10 6 146 1.3E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13425 d1ec03c27edc5e392faa78431ef709cd 148 SMART SM00347 32 130 6.3E-21 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 152 1.3E-22 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 Gene3D G3DSA:3.30.450.90 167 287 7.1E-43 T 23-04-2016 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 PANTHER PTHR30258 1 567 8.9E-179 T 23-04-2016 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 SUPERFAMILY SSF160246 3 149 1.31E-35 T 23-04-2016 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 Gene3D G3DSA:3.40.50.300 292 562 5.1E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 Pfam PF00437 Type II/IV secretion system protein 190 454 1.9E-70 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 SUPERFAMILY SSF52540 174 560 1.89E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00450 6ac7e83d3800f0f9b8a20ab7861c221e 567 PANTHER PTHR30258:SF2 1 567 8.9E-179 T 23-04-2016 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 PIRSF PIRSF005650 1 238 3.1E-93 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 PANTHER PTHR21499 3 236 3.5E-112 T 23-04-2016 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 PANTHER PTHR21499:SF23 3 236 3.5E-112 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 Pfam PF00696 Amino acid kinase family 7 216 2.9E-27 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.009 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 SUPERFAMILY SSF53633 5 237 1.96E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 236 1.8E-102 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 MSIP34_RS07160 38dd3330beb7ca48573a1c6da737b3bf 238 Gene3D G3DSA:3.40.1160.10 3 236 1.8E-85 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 590 646 7.5E-11 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 215 233 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 406 423 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 259 281 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 6.2E-27 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 358 1.8E-72 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PANTHER PTHR30033:SF1 515 647 1.1E-106 T 23-04-2016 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PANTHER PTHR30033:SF1 1 492 1.1E-106 T 23-04-2016 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PANTHER PTHR30033 515 647 1.1E-106 T 23-04-2016 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 PANTHER PTHR30033 1 492 1.1E-106 T 23-04-2016 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 Pfam PF00460 Flagella basal body rod protein 6 35 1.6E-5 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 SUPERFAMILY SSF64518 143 452 7.85E-23 T 23-04-2016 MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site MSIP34_RS03935 b0df05e73e4a7422c389ab78417f2cca 647 SUPERFAMILY SSF64518 455 645 7.06E-24 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 SMART SM00471 440 587 4.7E-8 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Pfam PF01966 HD domain 444 556 2.0E-12 T 23-04-2016 IPR006674 HD domain MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Gene3D G3DSA:1.10.3210.10 414 601 9.7E-23 T 23-04-2016 IPR006674 HD domain MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 PANTHER PTHR13734:SF45 85 680 2.0E-111 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 SUPERFAMILY SSF55021 687 750 7.91E-7 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 862 292.199 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 SUPERFAMILY SSF81301 33 162 9.06E-22 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 PIRSF PIRSF006288 2 862 1.1E-301 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 SUPERFAMILY SSF109604 411 556 2.92E-15 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Gene3D G3DSA:3.30.70.260 791 859 6.6E-10 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Gene3D G3DSA:3.30.460.10 68 159 1.7E-7 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 SUPERFAMILY SSF81593 179 278 1.1E-8 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 SUPERFAMILY SSF55021 790 857 5.73E-9 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 27 862 1.4E-249 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 PANTHER PTHR13734 85 680 2.0E-111 T 23-04-2016 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Pfam PF01909 Nucleotidyltransferase domain 52 96 1.1E-5 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 MSIP34_RS07180 4c4c3b54ca1318bc32571968aff5d58f 862 Pfam PF08335 GlnD PII-uridylyltransferase 170 308 6.9E-33 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Pfam PF00012 Hsp70 protein 4 603 2.5E-265 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PANTHER PTHR19375 2 640 0.0 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.2E-80 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:3.90.640.10 230 315 1.9E-30 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 SUPERFAMILY SSF53067 4 184 6.35E-65 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:3.30.30.30 53 107 1.5E-25 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 7.1E-295 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:3.30.420.40 119 192 9.0E-64 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:3.30.420.40 4 52 9.0E-64 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:3.30.420.40 319 361 1.4E-33 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:3.30.420.40 193 229 1.4E-33 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 SUPERFAMILY SSF100920 384 540 2.88E-63 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 37.267 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 PANTHER PTHR19375:SF173 2 640 0.0 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 SUPERFAMILY SSF53067 187 382 2.47E-67 T 23-04-2016 MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:1.20.1270.10 532 603 6.2E-30 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 SUPERFAMILY SSF100934 507 604 9.68E-21 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 Gene3D G3DSA:2.60.34.10 390 531 1.2E-71 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain MSIP34_RS09645 b0009abef94c7a058d54bfd812bac58d 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS07095 27253219d3ea9aa5cb97b21c3e4cdd48 251 SUPERFAMILY SSF53790 15 246 1.13E-69 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS07095 27253219d3ea9aa5cb97b21c3e4cdd48 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 32 227 2.0E-9 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS07095 27253219d3ea9aa5cb97b21c3e4cdd48 251 PIRSF PIRSF005917 4 249 4.6E-56 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS07095 27253219d3ea9aa5cb97b21c3e4cdd48 251 PANTHER PTHR21091 5 234 8.4E-26 T 23-04-2016 MSIP34_RS07095 27253219d3ea9aa5cb97b21c3e4cdd48 251 Gene3D G3DSA:3.30.950.10 132 247 4.7E-27 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 MSIP34_RS07095 27253219d3ea9aa5cb97b21c3e4cdd48 251 PANTHER PTHR21091:SF18 5 234 8.4E-26 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Pfam PF01769 Divalent cation transporter 349 471 3.7E-25 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 SUPERFAMILY SSF54631 164 303 5.49E-28 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 TIGRFAM TIGR00400 mgtE: magnesium transporter 43 477 2.3E-88 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 SUPERFAMILY SSF161093 306 477 1.57E-49 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 SMART SM00924 62 165 4.2E-33 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 PANTHER PTHR11911 1 458 1.3E-40 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Gene3D G3DSA:1.10.357.20 306 477 6.3E-56 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Gene3D G3DSA:3.10.580.10 157 289 3.6E-17 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Pfam PF03448 MgtE intracellular N domain 62 163 2.5E-23 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Pfam PF00571 CBS domain 165 218 2.7E-4 T 23-04-2016 IPR000644 CBS domain MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Pfam PF00571 CBS domain 229 283 4.6E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 PANTHER PTHR11911:SF99 1 458 1.3E-40 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 Gene3D G3DSA:1.25.60.10 40 156 8.2E-22 T 23-04-2016 MSIP34_RS01720 fe7a3dcc3a94f06b7c24ffe933d50f3f 478 SUPERFAMILY SSF158791 41 162 1.7E-25 T 23-04-2016 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 Gene3D G3DSA:1.10.10.10 95 136 6.4E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 Hamap MF_01114 Regulatory protein RecX [recX]. 6 191 13.956 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 Gene3D G3DSA:1.10.10.10 140 185 2.7E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 Pfam PF02631 RecX family 77 186 3.8E-30 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 PANTHER PTHR33602 4 34 3.1E-24 T 23-04-2016 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 PANTHER PTHR33602 72 186 3.1E-24 T 23-04-2016 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 PANTHER PTHR33602:SF1 4 34 3.1E-24 T 23-04-2016 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 PANTHER PTHR33602:SF1 72 186 3.1E-24 T 23-04-2016 MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 Gene3D G3DSA:1.10.10.10 12 40 2.8E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11015 f573fd8f14ba8fdc96d581971dd53200 198 Gene3D G3DSA:1.10.10.10 78 94 2.8E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 2.2E-180 T 23-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 PANTHER PTHR30011:SF1 1 374 3.6E-184 T 23-04-2016 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 PANTHER PTHR30011 1 374 3.6E-184 T 23-04-2016 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 SUPERFAMILY SSF51679 1 347 3.53E-95 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 Gene3D G3DSA:3.20.20.30 285 348 2.8E-103 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 Gene3D G3DSA:3.20.20.30 1 251 2.8E-103 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 Pfam PF00296 Luciferase-like monooxygenase 1 324 2.2E-86 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS09890 d66f9cf42a2b642d20c59bc604ba3c6f 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 380 68.492 T 23-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 Gene3D G3DSA:1.10.1740.10 10 79 1.4E-10 T 23-04-2016 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 Pfam PF08281 Sigma-70, region 4 109 161 4.0E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 Gene3D G3DSA:1.10.10.10 106 161 2.2E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 SUPERFAMILY SSF88659 103 162 1.98E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 PANTHER PTHR30173:SF9 7 161 4.2E-35 T 23-04-2016 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 158 2.5E-14 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 SUPERFAMILY SSF88946 9 75 2.86E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 PANTHER PTHR30173 7 161 4.2E-35 T 23-04-2016 MSIP34_RS08040 0288b48a789ba29e2ca0f12ac8603727 168 Pfam PF04542 Sigma-70 region 2 13 77 3.3E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 Gene3D G3DSA:3.30.300.20 17 107 3.0E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 Pfam PF07650 KH domain 38 110 2.3E-20 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 SUPERFAMILY SSF54821 108 206 1.16E-40 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 PANTHER PTHR11760 2 223 2.6E-133 T 23-04-2016 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 7.8E-95 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 PANTHER PTHR11760:SF19 2 223 2.6E-133 T 23-04-2016 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 SMART SM00322 60 125 4.4E-6 T 23-04-2016 IPR004087 K Homology domain GO:0003676 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.042 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.8E-41 T 23-04-2016 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 SUPERFAMILY SSF54814 2 106 1.7E-37 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 MSIP34_RS01610 a07189ab0c84d1ae35021095c3ec4ba8 237 Gene3D G3DSA:3.30.1140.32 108 207 5.4E-47 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624 550 764 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624 783 866 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624 360 451 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624 72 291 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624 477 532 0.0 T 23-04-2016 IPR033247 Transketolase family MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 Gene3D G3DSA:3.40.50.970 55 464 3.6E-155 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 82 291 3.9E-12 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 SUPERFAMILY SSF52922 698 883 3.49E-61 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 Gene3D G3DSA:3.40.50.920 703 882 1.1E-77 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 882 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624:SF67 550 764 0.0 T 23-04-2016 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624:SF67 783 866 0.0 T 23-04-2016 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624:SF67 360 451 0.0 T 23-04-2016 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624:SF67 72 291 0.0 T 23-04-2016 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PANTHER PTHR11624:SF67 477 532 0.0 T 23-04-2016 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 PIRSF PIRSF000156 1 884 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 SUPERFAMILY SSF52518 55 464 3.14E-141 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 Gene3D G3DSA:3.40.50.970 469 701 1.0E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03365 d0ae85cd5f07afa88613a9aec51560ab 884 SUPERFAMILY SSF52518 470 697 1.77E-97 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 Pfam PF00072 Response regulator receiver domain 7 119 4.6E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 205 9.0E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 SUPERFAMILY SSF52172 4 134 6.97E-35 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 SMART SM00421 148 205 2.8E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 SMART SM00448 5 118 1.5E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 Gene3D G3DSA:3.40.50.2300 3 152 3.4E-39 T 23-04-2016 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 PANTHER PTHR26402:SF151 5 211 1.6E-69 T 23-04-2016 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.2E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.2E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.2E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 Gene3D G3DSA:1.10.10.10 153 212 9.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 SUPERFAMILY SSF46894 142 212 3.3E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 PANTHER PTHR26402 5 211 1.6E-69 T 23-04-2016 MSIP34_RS07970 4512a6e22292e2fc83b07a16beabf7d9 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS11385 1b899e2b5c946188c4224ad91b2648ea 137 PANTHER PTHR40255 1 137 2.5E-50 T 23-04-2016 MSIP34_RS11385 1b899e2b5c946188c4224ad91b2648ea 137 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 137 4.6E-49 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 MSIP34_RS11385 1b899e2b5c946188c4224ad91b2648ea 137 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 137 9.6E-44 T 23-04-2016 IPR014351 Conserved hypothetical protein CHP00701 MSIP34_RS11385 1b899e2b5c946188c4224ad91b2648ea 137 PIRSF PIRSF004638 1 137 3.9E-55 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 MSIP34_RS09355 c16aa74afafcb97b60090fb6bb3d3bb3 132 Pfam PF01592 NifU-like N terminal domain 2 126 7.5E-56 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 MSIP34_RS09355 c16aa74afafcb97b60090fb6bb3d3bb3 132 PANTHER PTHR10093:SF3 1 126 5.1E-94 T 23-04-2016 MSIP34_RS09355 c16aa74afafcb97b60090fb6bb3d3bb3 132 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 4.5E-68 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 MSIP34_RS09355 c16aa74afafcb97b60090fb6bb3d3bb3 132 Gene3D G3DSA:3.90.1010.10 2 129 1.1E-55 T 23-04-2016 MSIP34_RS09355 c16aa74afafcb97b60090fb6bb3d3bb3 132 SUPERFAMILY SSF82649 5 128 2.46E-48 T 23-04-2016 MSIP34_RS09355 c16aa74afafcb97b60090fb6bb3d3bb3 132 PANTHER PTHR10093 1 126 5.1E-94 T 23-04-2016 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 PANTHER PTHR10438 5 108 1.2E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 Pfam PF00085 Thioredoxin 6 106 2.5E-34 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 SUPERFAMILY SSF52833 2 107 5.84E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 PIRSF PIRSF000077 2 108 2.0E-45 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 23-04-2016 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 23-04-2016 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 23-04-2016 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 8.7E-40 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 MSIP34_RS11675 b1b9839f9d965f605b58a57d6cd77243 108 Gene3D G3DSA:3.40.30.10 2 107 6.0E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS04665 3bd00f97dccb65c929f2c0e18e492bd9 88 Pfam PF01722 BolA-like protein 13 85 2.4E-26 T 23-04-2016 IPR002634 BolA protein MSIP34_RS04665 3bd00f97dccb65c929f2c0e18e492bd9 88 PANTHER PTHR12735:SF24 5 87 1.7E-25 T 23-04-2016 MSIP34_RS04665 3bd00f97dccb65c929f2c0e18e492bd9 88 PANTHER PTHR12735 5 87 1.7E-25 T 23-04-2016 MSIP34_RS04665 3bd00f97dccb65c929f2c0e18e492bd9 88 SUPERFAMILY SSF82657 2 86 4.32E-23 T 23-04-2016 IPR002634 BolA protein MSIP34_RS04665 3bd00f97dccb65c929f2c0e18e492bd9 88 Gene3D G3DSA:3.30.70.1500 5 80 2.1E-24 T 23-04-2016 MSIP34_RS04665 3bd00f97dccb65c929f2c0e18e492bd9 88 PIRSF PIRSF003113 1 88 5.0E-25 T 23-04-2016 IPR002634 BolA protein MSIP34_RS12335 988469e71410c98944dc358db3982a71 206 PANTHER PTHR31876 1 202 3.6E-56 T 23-04-2016 MSIP34_RS12335 988469e71410c98944dc358db3982a71 206 Pfam PF04367 Protein of unknown function (DUF502) 56 161 2.7E-38 T 23-04-2016 IPR007462 Protein of unknown function DUF502 MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 Pfam PF08447 PAS fold 48 132 2.7E-15 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 SMART SM00267 146 322 1.6E-55 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 PANTHER PTHR10799:SF750 39 317 1.0E-24 T 23-04-2016 MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 SMART SM00086 97 139 1.1E-8 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 SUPERFAMILY SSF55073 162 320 1.33E-43 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 SUPERFAMILY SSF55785 28 141 2.97E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 146 3.0E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 Gene3D G3DSA:3.30.450.20 25 156 2.3E-23 T 23-04-2016 MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 317 4.8E-48 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 Gene3D G3DSA:3.30.70.270 159 319 5.1E-46 T 23-04-2016 MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 319 4.3E-49 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13670 c9ba77ffe5232911e412785cdc4940d2 323 PANTHER PTHR10799 39 317 1.0E-24 T 23-04-2016 MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 PANTHER PTHR33525 15 375 3.5E-87 T 23-04-2016 MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 Gene3D G3DSA:1.10.3150.10 196 417 3.2E-29 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 Pfam PF00563 EAL domain 21 204 1.2E-16 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 SMART SM00052 2 209 5.6E-6 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 PIRSF PIRSF003180 14 421 2.2E-114 T 23-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 SUPERFAMILY SSF109604 195 417 2.17E-35 T 23-04-2016 MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 PANTHER PTHR33525:SF4 15 375 3.5E-87 T 23-04-2016 MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 Gene3D G3DSA:3.20.20.450 93 195 8.0E-15 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 Pfam PF08668 HDOD domain 228 337 5.9E-10 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS12965 c8c9b3116c0878979421fa42e2110dab 422 SUPERFAMILY SSF141868 16 209 1.44E-30 T 23-04-2016 IPR001633 EAL domain MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 PANTHER PTHR30368 18 327 1.7E-170 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 324 2.0E-143 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 SUPERFAMILY SSF53850 18 325 4.94E-89 T 23-04-2016 MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 Gene3D G3DSA:3.40.190.10 19 163 6.3E-49 T 23-04-2016 MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 Gene3D G3DSA:3.40.190.10 172 293 7.1E-27 T 23-04-2016 MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 Pfam PF13531 Bacterial extracellular solute-binding protein 33 278 2.4E-42 T 23-04-2016 MSIP34_RS10835 98be503db460da718f3e5799136d5670 327 PANTHER PTHR30368:SF2 18 327 1.7E-170 T 23-04-2016 MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 Gene3D G3DSA:3.40.50.300 235 413 1.5E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 311 3.2E-87 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 Gene3D G3DSA:1.20.120.140 171 234 2.8E-6 T 23-04-2016 MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 SMART SM00962 223 415 1.1E-48 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 PANTHER PTHR11564:SF3 129 412 1.4E-63 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 PANTHER PTHR11564 129 412 1.4E-63 T 23-04-2016 MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 SMART SM00382 222 388 6.3E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 SUPERFAMILY SSF52540 219 414 5.23E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04030 1dc76a9ce00923e14b53db375ab8057b 452 Pfam PF00448 SRP54-type protein, GTPase domain 225 413 2.6E-34 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 SMART SM01390 3 98 1.1E-55 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 PANTHER PTHR11831 1 209 9.1E-89 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 Gene3D G3DSA:3.10.290.10 102 200 3.2E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 Pfam PF01479 S4 domain 100 146 2.1E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 35.624 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 4 209 8.9E-77 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 SMART SM00363 99 163 4.7E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 Gene3D G3DSA:1.10.1050.10 1 101 3.5E-44 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 SUPERFAMILY SSF55174 2 209 5.23E-73 T 23-04-2016 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 1.2E-28 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 MSIP34_RS01700 970a06f38dd1efc2d86192076707d971 209 PANTHER PTHR11831:SF4 1 209 9.1E-89 T 23-04-2016 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 Gene3D G3DSA:2.170.130.10 117 273 6.6E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 Gene3D G3DSA:2.40.170.20 278 803 4.5E-108 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 Pfam PF00593 TonB dependent receptor 570 801 2.1E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 PANTHER PTHR32552:SF14 151 803 6.3E-66 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 168 803 2.0E-93 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 SUPERFAMILY SSF56935 121 130 3.66E-101 T 23-04-2016 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 SUPERFAMILY SSF56935 158 803 3.66E-101 T 23-04-2016 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 Pfam PF07715 TonB-dependent Receptor Plug Domain 166 262 2.1E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 Pfam PF07660 Secretin and TonB N terminus short domain 60 108 1.4E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 PANTHER PTHR32552 151 803 6.3E-66 T 23-04-2016 MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 786 803 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS02125 bca8fff8ad56e85b8f6e5bd35bff03db 803 SMART SM00965 58 109 6.1E-12 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 2 287 33.103 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 Pfam PF03193 Protein of unknown function, DUF258 58 224 1.2E-51 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 Gene3D G3DSA:1.10.40.50 225 285 1.1E-20 T 23-04-2016 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 37 282 2.0E-66 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 SUPERFAMILY SSF50249 3 55 8.57E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 PANTHER PTHR32120 2 285 4.1E-97 T 23-04-2016 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 PANTHER PTHR32120:SF2 2 285 4.1E-97 T 23-04-2016 MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 SUPERFAMILY SSF52540 72 284 2.18E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 Gene3D G3DSA:3.40.50.300 72 224 3.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07325 2a902c6bd4385a6d4aafd0ed51e943b8 287 Gene3D G3DSA:2.40.50.140 3 55 1.1E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00330 628b4eca95b9ee697b4562eae869e79b 448 PANTHER PTHR21666:SF221 12 429 1.9E-68 T 23-04-2016 MSIP34_RS00330 628b4eca95b9ee697b4562eae869e79b 448 PANTHER PTHR21666 12 429 1.9E-68 T 23-04-2016 MSIP34_RS00330 628b4eca95b9ee697b4562eae869e79b 448 SUPERFAMILY SSF51261 160 408 1.73E-66 T 23-04-2016 IPR011055 Duplicated hybrid motif MSIP34_RS00330 628b4eca95b9ee697b4562eae869e79b 448 Pfam PF01551 Peptidase family M23 310 406 2.0E-29 T 23-04-2016 IPR016047 Peptidase M23 MSIP34_RS00330 628b4eca95b9ee697b4562eae869e79b 448 Gene3D G3DSA:2.70.70.10 261 409 1.3E-43 T 23-04-2016 MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 Gene3D G3DSA:3.40.50.150 2 187 3.4E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 253 1.3E-62 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 SUPERFAMILY SSF53335 11 253 3.99E-75 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 254 56.226 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 Gene3D G3DSA:1.10.8.100 190 253 4.2E-23 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 PANTHER PTHR11727 3 253 2.1E-81 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 SMART SM00650 19 187 9.8E-76 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 253 1.9E-83 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 MSIP34_RS02930 b5acd3e3f64ea645ddcb4af71beafae2 254 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 35 62 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 MSIP34_RS03780 e77613ff1748d2fbc813be5e26a8c103 312 PANTHER PTHR33608 118 307 2.2E-12 T 23-04-2016 MSIP34_RS03780 e77613ff1748d2fbc813be5e26a8c103 312 PANTHER PTHR33608 9 98 2.2E-12 T 23-04-2016 MSIP34_RS03780 e77613ff1748d2fbc813be5e26a8c103 312 Pfam PF01882 Protein of unknown function DUF58 49 144 5.8E-6 T 23-04-2016 IPR002881 Domain of unknown function DUF58 MSIP34_RS10710 8a0df7fa326a44e5c8ff4c2527265c85 238 Pfam PF01553 Acyltransferase 59 182 4.3E-16 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 MSIP34_RS10710 8a0df7fa326a44e5c8ff4c2527265c85 238 SMART SM00563 71 185 7.8E-26 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 MSIP34_RS10710 8a0df7fa326a44e5c8ff4c2527265c85 238 SUPERFAMILY SSF69593 10 233 1.11E-36 T 23-04-2016 MSIP34_RS10710 8a0df7fa326a44e5c8ff4c2527265c85 238 Gene3D G3DSA:3.40.1130.10 63 221 1.5E-18 T 23-04-2016 MSIP34_RS10710 8a0df7fa326a44e5c8ff4c2527265c85 238 PANTHER PTHR10434:SF11 1 236 7.3E-51 T 23-04-2016 MSIP34_RS10710 8a0df7fa326a44e5c8ff4c2527265c85 238 PANTHER PTHR10434 1 236 7.3E-51 T 23-04-2016 MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 PANTHER PTHR24078 8 69 2.5E-18 T 23-04-2016 MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 SUPERFAMILY SSF46565 4 74 1.1E-19 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 Gene3D G3DSA:1.10.287.110 7 64 5.5E-19 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 PRINTS PR00625 DnaJ domain signature 9 27 1.7E-12 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 PRINTS PR00625 DnaJ domain signature 44 64 1.7E-12 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 PRINTS PR00625 DnaJ domain signature 27 42 1.7E-12 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 Pfam PF00226 DnaJ domain 7 69 2.9E-18 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS04885 67552bd09d3ef7fd666af551cc8228d5 306 SMART SM00271 6 64 2.7E-19 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS00565 cbd2e70edb576f2570561296afefce49 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 2.7E-27 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 MSIP34_RS00565 cbd2e70edb576f2570561296afefce49 135 PANTHER PTHR30558 10 135 1.4E-29 T 23-04-2016 MSIP34_RS00565 cbd2e70edb576f2570561296afefce49 135 PANTHER PTHR30558:SF3 10 135 1.4E-29 T 23-04-2016 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 SMART SM00283 518 751 1.1E-73 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 Gene3D G3DSA:1.10.287.950 528 723 2.9E-44 T 23-04-2016 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 595 749 9.3E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 532 561 9.6E-29 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 638 667 9.6E-29 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 609 636 9.6E-29 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 SUPERFAMILY SSF58104 485 752 1.13E-62 T 23-04-2016 MSIP34_RS13570 26977c27918b404ae1b3d067611441a8 795 PANTHER PTHR32089 466 754 6.4E-96 T 23-04-2016 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 SUPERFAMILY SSF55307 203 316 3.2E-38 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 327 5.0E-123 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 Gene3D G3DSA:3.30.1330.20 214 316 4.1E-40 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 SMART SM00865 206 324 6.9E-49 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 Gene3D G3DSA:3.40.50.1440 14 213 1.0E-90 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 PANTHER PTHR30314:SF3 1 387 5.1E-176 T 23-04-2016 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 362 36.139 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 Pfam PF12327 FtsZ family, C-terminal domain 221 315 3.1E-27 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 SMART SM00864 13 204 2.7E-112 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 PANTHER PTHR30314 1 387 5.1E-176 T 23-04-2016 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.8E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.8E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.8E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.8E-46 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 SUPERFAMILY SSF52490 13 207 7.06E-69 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS02375 3a1e7ef41c0ffbb013000a24b05320ab 389 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 172 3.2E-40 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 SUPERFAMILY SSF81593 269 418 8.63E-42 T 23-04-2016 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 SUPERFAMILY SSF81301 5 268 3.38E-77 T 23-04-2016 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 22 260 1.2E-70 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 538 771 1.3E-71 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 SUPERFAMILY SSF81301 509 781 1.31E-76 T 23-04-2016 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 16 911 19.196 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 PANTHER PTHR30621 28 906 1.2E-262 T 23-04-2016 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 SUPERFAMILY SSF81593 781 909 2.35E-29 T 23-04-2016 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Pfam PF08335 GlnD PII-uridylyltransferase 792 884 8.8E-11 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Pfam PF08335 GlnD PII-uridylyltransferase 279 418 5.0E-46 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Gene3D G3DSA:3.30.460.10 622 777 2.2E-49 T 23-04-2016 MSIP34_RS08015 413e50eaeca3931c55e65a1d43eabc25 911 Gene3D G3DSA:3.30.460.10 98 267 1.9E-59 T 23-04-2016 MSIP34_RS04685 ee667061f4a98e449016515056673102 209 PANTHER PTHR17490 1 209 1.0E-85 T 23-04-2016 MSIP34_RS04685 ee667061f4a98e449016515056673102 209 Pfam PF01300 Telomere recombination 22 198 4.8E-43 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 MSIP34_RS04685 ee667061f4a98e449016515056673102 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 201 1.1E-60 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 MSIP34_RS04685 ee667061f4a98e449016515056673102 209 Gene3D G3DSA:3.90.870.10 2 202 1.3E-62 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain MSIP34_RS04685 ee667061f4a98e449016515056673102 209 PANTHER PTHR17490:SF7 1 209 1.0E-85 T 23-04-2016 MSIP34_RS04685 ee667061f4a98e449016515056673102 209 SUPERFAMILY SSF55821 1 203 3.36E-62 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 SMART SM00460 176 252 7.4E-20 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 281 1092 0.0 T 23-04-2016 IPR018667 Domain of unknown function DUF2126 MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 PANTHER PTHR33490:SF1 1 515 1.0E-230 T 23-04-2016 MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 Pfam PF01841 Transglutaminase-like superfamily 148 250 9.9E-20 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 PANTHER PTHR33490 1 515 1.0E-230 T 23-04-2016 MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 SUPERFAMILY SSF54001 8 341 1.68E-71 T 23-04-2016 MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 83 2.1E-27 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal MSIP34_RS01775 a0a57757e223856cbf281d127d2a6fc2 1096 Gene3D G3DSA:3.90.260.10 179 253 1.7E-11 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 SUPERFAMILY SSF88946 8 97 6.67E-11 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 158 2.6E-19 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 Pfam PF08281 Sigma-70, region 4 108 160 4.0E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 SUPERFAMILY SSF88659 89 160 9.16E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 PANTHER PTHR30173 9 157 6.0E-31 T 23-04-2016 MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 Gene3D G3DSA:1.10.10.10 104 159 1.0E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 Pfam PF04542 Sigma-70 region 2 12 77 1.4E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS13795 2d471a61aaeb7508acc0e7fe58188866 165 Gene3D G3DSA:1.10.1740.10 8 101 1.5E-10 T 23-04-2016 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 Pfam PF01464 Transglycosylase SLT domain 477 580 1.7E-22 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 Gene3D G3DSA:1.10.530.10 463 623 3.6E-46 T 23-04-2016 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 PANTHER PTHR21666 455 615 1.1E-37 T 23-04-2016 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 Gene3D G3DSA:1.10.1240.20 398 451 9.3E-14 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 Gene3D G3DSA:1.25.20.10 20 375 1.3E-89 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 SUPERFAMILY SSF53955 468 626 1.81E-44 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 SUPERFAMILY SSF48435 20 466 8.89E-101 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 MSIP34_RS02390 9ea6b6320617d213fdf730a8d02c156b 643 Pfam PF14718 Soluble lytic murein transglycosylase L domain 397 452 1.8E-10 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 SUPERFAMILY SSF89963 91 164 1.44E-26 T 23-04-2016 IPR007551 Protein of unknown function DUF520 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 SUPERFAMILY SSF89963 2 90 4.18E-26 T 23-04-2016 IPR007551 Protein of unknown function DUF520 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 PANTHER PTHR30476 1 164 2.1E-60 T 23-04-2016 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 Pfam PF04461 Protein of unknown function (DUF520) 2 163 3.0E-60 T 23-04-2016 IPR007551 Protein of unknown function DUF520 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 164 24.268 T 23-04-2016 IPR007551 Protein of unknown function DUF520 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 Gene3D G3DSA:3.30.70.990 9 97 1.9E-27 T 23-04-2016 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 Gene3D G3DSA:3.30.70.860 98 164 2.4E-31 T 23-04-2016 MSIP34_RS07910 fd1ac611b0f84c6d036484db687774ec 164 PANTHER PTHR30476:SF0 1 164 2.1E-60 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 PANTHER PTHR32282 419 755 6.3E-245 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 PANTHER PTHR32282 1 313 6.3E-245 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 68 710 4.6E-197 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Pfam PF17092 Penicillin-binding protein OB-like domain 319 423 2.6E-18 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Gene3D G3DSA:1.10.3810.10 60 234 1.9E-74 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Gene3D G3DSA:2.40.50.140 352 419 3.8E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 SUPERFAMILY SSF56601 420 754 1.41E-129 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 SUPERFAMILY SSF56601 214 236 1.41E-129 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 SUPERFAMILY SSF56601 265 316 1.41E-129 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Pfam PF00912 Transglycosylase 60 233 1.3E-65 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Gene3D G3DSA:3.40.710.10 235 316 2.8E-137 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Gene3D G3DSA:3.40.710.10 420 758 2.8E-137 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 SUPERFAMILY SSF53955 45 255 2.59E-76 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 PANTHER PTHR32282:SF5 419 755 6.3E-245 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 PANTHER PTHR32282:SF5 1 313 6.3E-245 T 23-04-2016 MSIP34_RS12610 07287d5653e9d00f4f69aa4ff51677c1 787 Pfam PF00905 Penicillin binding protein transpeptidase domain 427 695 1.6E-40 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 32 191 4.2E-46 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 2.5E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 71 83 2.5E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 60 2.5E-12 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 Gene3D G3DSA:2.40.100.10 16 198 2.3E-52 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 PANTHER PTHR11071:SF192 33 194 1.0E-59 T 23-04-2016 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 66 83 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 SUPERFAMILY SSF50891 33 193 2.63E-54 T 23-04-2016 IPR029000 Cyclophilin-like domain MSIP34_RS11325 6332babe03cfb40b201a54a94eb29e97 222 PANTHER PTHR11071 33 194 1.0E-59 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Gene3D G3DSA:3.20.20.450 463 711 1.7E-98 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Pfam PF13426 PAS domain 173 277 1.9E-13 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SUPERFAMILY SSF55073 294 451 1.57E-49 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Gene3D G3DSA:3.30.450.20 159 276 1.4E-26 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Pfam PF00563 EAL domain 467 701 5.7E-74 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SMART SM00091 162 229 4.3E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SMART SM00091 31 102 3.7E-4 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Pfam PF08447 PAS fold 56 143 2.9E-20 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 448 4.5E-47 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 PANTHER PTHR10799:SF774 88 130 5.4E-85 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 PANTHER PTHR10799:SF774 322 540 5.4E-85 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 PANTHER PTHR10799:SF774 670 689 5.4E-85 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SMART SM00086 236 278 4.4E-7 T 23-04-2016 IPR001610 PAC motif MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SMART SM00086 108 150 1.2E-6 T 23-04-2016 IPR001610 PAC motif MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 282 4.2E-23 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 157 8.4E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SMART SM00267 278 450 2.3E-62 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SUPERFAMILY SSF141868 467 711 8.24E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 446 1.1E-51 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 PANTHER PTHR10799 88 130 5.4E-85 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 PANTHER PTHR10799 322 540 5.4E-85 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 PANTHER PTHR10799 670 689 5.4E-85 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Gene3D G3DSA:3.30.70.270 290 456 1.2E-57 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SUPERFAMILY SSF55785 47 151 2.39E-23 T 23-04-2016 IPR000014 PAS domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SMART SM00052 460 706 2.2E-114 T 23-04-2016 IPR001633 EAL domain MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 Gene3D G3DSA:3.30.450.20 36 158 3.4E-25 T 23-04-2016 MSIP34_RS08610 130bd8cb1930f356625fda536425d3fc 718 SUPERFAMILY SSF55785 147 276 4.19E-25 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 2.0E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 2.0E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 SUPERFAMILY SSF48498 91 210 9.34E-8 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 Pfam PF09209 Domain of unknown function (DUF1956) 91 208 9.9E-16 T 23-04-2016 IPR015292 Transcription regulator YbiH, C-terminal MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 Gene3D G3DSA:1.10.10.60 11 58 4.9E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 PANTHER PTHR30055:SF73 4 69 1.8E-19 T 23-04-2016 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 5.6E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 Gene3D G3DSA:1.10.357.10 59 217 1.8E-33 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 SUPERFAMILY SSF46689 10 69 3.28E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09860 8305eab982f4320b50d64be8b1e6c94b 225 PANTHER PTHR30055 4 69 1.8E-19 T 23-04-2016 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 SMART SM00388 131 196 1.0E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 SUPERFAMILY SSF55874 197 348 3.41E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 SMART SM00387 235 350 1.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 PANTHER PTHR24423:SF488 12 349 3.0E-102 T 23-04-2016 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 Gene3D G3DSA:3.30.565.10 196 349 8.4E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 Gene3D G3DSA:1.10.287.130 128 188 1.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 Pfam PF00989 PAS fold 12 99 2.2E-10 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 Gene3D G3DSA:3.30.450.20 12 102 7.8E-16 T 23-04-2016 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 349 4.6E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 PANTHER PTHR24423 12 349 3.0E-102 T 23-04-2016 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 SMART SM00091 6 73 0.0015 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 2.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 SUPERFAMILY SSF55785 12 98 1.17E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 3.3E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12545 dcaf8e13917741e164c010bb04581ea2 360 SUPERFAMILY SSF47384 123 193 1.63E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 Pfam PF00069 Protein kinase domain 18 279 1.9E-32 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 Gene3D G3DSA:1.10.510.10 101 288 2.2E-37 T 23-04-2016 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 Gene3D G3DSA:3.30.200.20 16 100 5.8E-15 T 23-04-2016 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 PANTHER PTHR24362 75 291 5.8E-50 T 23-04-2016 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 PANTHER PTHR24362 15 58 5.8E-50 T 23-04-2016 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 SMART SM00220 18 287 7.5E-32 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 155 167 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 MSIP34_RS00245 7bbb5d7eb70a5a70a9b5fc504056e7ae 313 SUPERFAMILY SSF56112 10 286 1.62E-53 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 Gene3D G3DSA:1.10.238.10 15 56 6.1E-11 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 Gene3D G3DSA:1.10.238.10 115 171 2.8E-4 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 ProSitePatterns PS00018 EF-hand calcium-binding domain. 56 68 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 Pfam PF13499 EF-hand domain pair 15 69 2.4E-10 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 SUPERFAMILY SSF47473 14 82 2.98E-14 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 SUPERFAMILY SSF47473 140 163 2.98E-14 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 Gene3D G3DSA:1.10.238.10 57 86 2.1E-9 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 SMART SM00054 11 39 97.0 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 SMART SM00054 140 168 7.2 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 SMART SM00054 47 75 0.45 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS06370 9d6d0eca3be8993bced1a41f0b3809b7 219 Pfam PF13202 EF hand 145 160 7.5E-4 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 Pfam PF03772 Competence protein 241 504 8.9E-58 T 23-04-2016 IPR004477 ComEC/Rec2-related protein MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 PANTHER PTHR30619:SF2 133 792 9.3E-163 T 23-04-2016 MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 PANTHER PTHR30619:SF2 1 110 9.3E-163 T 23-04-2016 MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 SUPERFAMILY SSF56281 528 768 1.34E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 153 764 1.5E-104 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 262 441 9.5E-25 T 23-04-2016 IPR004477 ComEC/Rec2-related protein MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 Pfam PF13567 Domain of unknown function (DUF4131) 14 197 9.6E-31 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 PANTHER PTHR30619 133 792 9.3E-163 T 23-04-2016 MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 Gene3D G3DSA:3.60.15.10 532 754 5.6E-28 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 Pfam PF00753 Metallo-beta-lactamase superfamily 538 608 5.9E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 SMART SM00849 541 735 3.4E-5 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03220 e17846f0197aaf74cc92d1732d865888 793 PANTHER PTHR30619 1 110 9.3E-163 T 23-04-2016 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 SMART SM00363 336 398 9.6E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 Gene3D G3DSA:3.10.290.10 325 396 8.3E-25 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 Pfam PF01479 S4 domain 340 381 2.7E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 3.1E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 3.1E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 3.1E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 3.1E-26 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 Gene3D G3DSA:1.10.240.10 228 324 9.5E-32 T 23-04-2016 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 397 47.595 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 SUPERFAMILY SSF55174 319 397 1.57E-17 T 23-04-2016 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 Gene3D G3DSA:3.40.50.620 10 227 5.3E-85 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 397 4.7E-119 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 SUPERFAMILY SSF52374 6 312 3.75E-94 T 23-04-2016 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 Pfam PF00579 tRNA synthetases class I (W and Y) 31 308 6.3E-79 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 PANTHER PTHR11766:SF1 4 399 4.1E-222 T 23-04-2016 MSIP34_RS00335 a24dda6fffad1a019365bdce8f30c4ab 400 PANTHER PTHR11766 4 399 4.1E-222 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 MSIP34_RS11610 3a60b3eb2158039cf73004358b1f8eb7 209 SUPERFAMILY SSF117074 128 197 3.27E-6 T 23-04-2016 MSIP34_RS11610 3a60b3eb2158039cf73004358b1f8eb7 209 SUPERFAMILY SSF49503 61 154 6.22E-14 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS11610 3a60b3eb2158039cf73004358b1f8eb7 209 Gene3D G3DSA:2.60.40.420 60 142 4.7E-8 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 389 38.285 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 Pfam PF00162 Phosphoglycerate kinase 6 379 5.0E-138 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 Gene3D G3DSA:3.40.50.1260 5 175 6.9E-63 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 309 334 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 342 353 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 365 382 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 3.6E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PIRSF PIRSF000724 1 392 1.2E-133 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 Gene3D G3DSA:3.40.50.1270 176 377 2.5E-83 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 PANTHER PTHR11406 1 392 2.3E-186 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS02470 065c53b782f9fba51de7fdf0f2b0d73c 393 SUPERFAMILY SSF53748 3 388 3.77E-143 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 5.9E-107 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Gene3D G3DSA:3.30.70.1430 38 138 1.2E-30 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PANTHER PTHR32063:SF13 1 1029 0.0 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82693 565 668 1.67E-26 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Gene3D G3DSA:3.30.2090.10 720 806 2.7E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Gene3D G3DSA:3.30.2090.10 180 274 7.1E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82866 804 1028 6.54E-43 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1030 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Gene3D G3DSA:1.10.3850.10 280 497 2.0E-60 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Gene3D G3DSA:1.10.3850.10 812 1025 2.7E-54 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82693 273 329 1.26E-23 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82693 135 181 1.26E-23 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82693 38 130 1.03E-23 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82714 181 270 2.62E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82714 720 806 3.01E-21 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 SUPERFAMILY SSF82866 295 496 1.96E-50 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 PANTHER PTHR32063 1 1029 0.0 T 23-04-2016 MSIP34_RS13625 82ab1b862af9df9b5de99aae77e03abd 1040 Gene3D G3DSA:3.30.70.1430 567 668 3.9E-29 T 23-04-2016 MSIP34_RS02850 b910555a3f3e086fb446968ef557d1f9 239 SMART SM00947 46 207 2.2E-41 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02850 b910555a3f3e086fb446968ef557d1f9 239 Pfam PF00484 Carbonic anhydrase 54 202 2.8E-35 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02850 b910555a3f3e086fb446968ef557d1f9 239 SUPERFAMILY SSF53056 6 207 5.1E-51 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02850 b910555a3f3e086fb446968ef557d1f9 239 PANTHER PTHR11002:SF17 1 222 2.5E-54 T 23-04-2016 MSIP34_RS02850 b910555a3f3e086fb446968ef557d1f9 239 Gene3D G3DSA:3.40.1050.10 8 205 9.6E-49 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02850 b910555a3f3e086fb446968ef557d1f9 239 PANTHER PTHR11002 1 222 2.5E-54 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Gene3D G3DSA:3.30.1360.120 587 645 6.4E-27 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Gene3D G3DSA:3.30.1360.120 738 831 6.4E-27 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 166 188 7.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 449 468 7.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 269 7.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 SUPERFAMILY SSF103025 585 869 2.83E-77 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Pfam PF01571 Aminomethyltransferase folate-binding domain 591 851 2.5E-69 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 862 953 2.9E-11 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 166 445 8.5E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Gene3D G3DSA:2.40.30.110 878 954 6.4E-11 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 SUPERFAMILY SSF51905 161 452 5.11E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 278 2.7E-8 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 397 413 2.7E-8 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 186 2.7E-8 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Gene3D G3DSA:3.30.70.1400 646 726 1.3E-19 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PANTHER PTHR13847:SF189 587 846 7.4E-25 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PANTHER PTHR13847:SF189 114 230 7.4E-25 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 SUPERFAMILY SSF101790 892 961 2.45E-11 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PANTHER PTHR13847 587 846 7.4E-25 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 PANTHER PTHR13847 114 230 7.4E-25 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 16 94 5.9E-20 T 23-04-2016 MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Gene3D G3DSA:3.40.50.720 163 328 8.9E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12200 851d1784724660f10d1ca5f44ccdb882 966 Gene3D G3DSA:3.50.50.60 343 471 9.6E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 118 2.2E-27 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 Gene3D G3DSA:3.90.1170.20 15 140 7.1E-51 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 121 284 1.4E-54 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 PIRSF PIRSF006250 13 287 1.6E-91 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 285 1.5E-90 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 SUPERFAMILY SSF54675 14 118 7.46E-31 T 23-04-2016 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 PANTHER PTHR32179 18 287 3.0E-112 T 23-04-2016 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 Gene3D G3DSA:3.20.20.70 141 274 8.5E-54 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS03105 0b741b225982626373976f27ffb0ac00 287 SUPERFAMILY SSF51690 121 285 5.1E-55 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 Gene3D G3DSA:3.10.50.30 85 165 2.6E-28 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 PIRSF PIRSF006092 7 167 8.8E-37 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 92 165 2.5E-26 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 PANTHER PTHR30437:SF6 1 165 1.4E-35 T 23-04-2016 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 SUPERFAMILY SSF54534 90 165 2.88E-21 T 23-04-2016 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 PANTHER PTHR30437 1 165 1.4E-35 T 23-04-2016 MSIP34_RS06235 814fc92d352bf3bf567cd3e3490fa225 167 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PANTHER PTHR26402:SF50 221 302 3.5E-53 T 23-04-2016 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PANTHER PTHR26402:SF50 12 143 3.5E-53 T 23-04-2016 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 SUPERFAMILY SSF46894 247 309 3.74E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 SMART SM00448 12 125 5.2E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 SMART SM00421 251 308 4.9E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 SUPERFAMILY SSF52172 14 144 2.28E-38 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 Gene3D G3DSA:1.10.10.10 253 309 2.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 Pfam PF00072 Response regulator receiver domain 14 125 2.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 254 268 1.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 268 284 1.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 284 296 1.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PANTHER PTHR26402 221 302 3.5E-53 T 23-04-2016 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 PANTHER PTHR26402 12 143 3.5E-53 T 23-04-2016 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 Pfam PF00196 Bacterial regulatory proteins, luxR family 254 307 9.7E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03640 9420819645eb78330f602e1fd6cbbb72 314 Gene3D G3DSA:3.40.50.2300 8 137 1.9E-37 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:1.10.8.280 285 404 3.5E-41 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:3.40.50.300 600 674 4.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:3.40.50.300 476 594 1.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:3.40.50.300 818 936 4.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:3.40.50.300 4 89 1.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:1.20.1580.10 405 475 3.3E-55 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:1.20.1580.10 91 129 3.3E-55 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:1.20.1580.10 249 282 3.3E-55 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 PANTHER PTHR32282 1 937 0.0 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:3.30.1490.20 130 153 7.9E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:3.30.1490.20 200 247 7.9E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Gene3D G3DSA:1.20.1580.10 691 817 6.1E-52 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 PANTHER PTHR32282:SF2 1 937 0.0 T 23-04-2016 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 SUPERFAMILY SSF52540 1 204 2.98E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 SUPERFAMILY SSF52540 428 567 2.98E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 SUPERFAMILY SSF52540 612 906 8.54E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 ProSitePatterns PS00211 ABC transporters family signature. 827 841 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 922 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 MSIP34_RS12510 674f8790fd84a858bcb874b369a7fea1 937 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 937 22.546 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 241 375 4.9E-14 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 Gene3D G3DSA:2.40.110.10 133 215 2.2E-18 T 23-04-2016 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 Gene3D G3DSA:1.10.540.10 19 113 1.1E-25 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 PANTHER PTHR10909 22 379 1.5E-111 T 23-04-2016 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 SUPERFAMILY SSF56645 22 223 7.59E-43 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 PIRSF PIRSF016578 5 383 3.2E-30 T 23-04-2016 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 209 3.1E-9 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 PANTHER PTHR10909:SF275 22 379 1.5E-111 T 23-04-2016 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 26 114 3.7E-8 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 SUPERFAMILY SSF47203 238 392 4.51E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MSIP34_RS09885 82a0139748d358afe1eb8a097c5774f4 400 Gene3D G3DSA:1.20.140.10 216 399 1.8E-55 T 23-04-2016 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 SUPERFAMILY SSF55961 142 368 4.4E-34 T 23-04-2016 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 168 367 2.9E-23 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 PANTHER PTHR21266:SF2 5 367 1.5E-40 T 23-04-2016 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 Pfam PF00355 Rieske [2Fe-2S] domain 29 112 4.0E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 PANTHER PTHR21266 5 367 1.5E-40 T 23-04-2016 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 SUPERFAMILY SSF50022 7 150 9.17E-30 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 83 1.5E-6 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 163 185 1.5E-6 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 126 152 1.5E-6 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 Gene3D G3DSA:2.102.10.10 29 133 1.2E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS13985 06aeed18771051140bfd31de83f47e12 371 Gene3D G3DSA:3.90.380.10 134 357 1.4E-23 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 1.8E-11 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 Gene3D G3DSA:3.10.20.30 1 101 7.4E-32 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 SUPERFAMILY SSF54292 4 106 2.49E-29 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 PANTHER PTHR23426 7 112 2.1E-36 T 23-04-2016 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 7.6E-56 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 PRINTS PR00355 Adrenodoxin signature 83 91 3.0E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 PRINTS PR00355 Adrenodoxin signature 42 52 3.0E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 MSIP34_RS09375 97e12f5d68b7ce65841cb23ebbbb67fb 113 PRINTS PR00355 Adrenodoxin signature 60 74 3.0E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PIRSF PIRSF000110 1 484 2.3E-155 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 482 1.3E-99 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 SUPERFAMILY SSF55347 179 485 5.23E-98 T 23-04-2016 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 Gene3D G3DSA:3.30.360.10 189 482 4.5E-103 T 23-04-2016 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 SUPERFAMILY SSF51735 3 192 1.57E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 Gene3D G3DSA:3.40.50.720 4 188 8.2E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 482 70.707 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 3.0E-39 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 3.0E-39 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 3.0E-39 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 3.0E-39 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 3.0E-39 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 189 9.5E-51 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PANTHER PTHR23429 1 491 3.3E-171 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 PANTHER PTHR23429:SF0 1 491 3.3E-171 T 23-04-2016 MSIP34_RS05580 5160da93ed9964ac0fa808090ad3f021 492 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 482 4.0E-157 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 SUPERFAMILY SSF117892 49 182 5.75E-36 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 SMART SM00244 18 176 7.8E-52 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 Pfam PF01145 SPFH domain / Band 7 family 22 193 5.0E-33 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PANTHER PTHR10264:SF27 4 277 5.8E-82 T 23-04-2016 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PANTHER PTHR10264 4 277 5.8E-82 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PRINTS PR00721 Stomatin signature 25 47 4.6E-25 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PRINTS PR00721 Stomatin signature 152 170 4.6E-25 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PRINTS PR00721 Stomatin signature 73 94 4.6E-25 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PRINTS PR00721 Stomatin signature 108 125 4.6E-25 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PRINTS PR00721 Stomatin signature 128 151 4.6E-25 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00495 65f7a4f1ba3eac6b0663e1ecbc9cc13c 281 PRINTS PR00721 Stomatin signature 171 192 4.6E-25 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 361 2.4E-106 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 SUPERFAMILY SSF53383 14 361 4.21E-82 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 Gene3D G3DSA:3.40.640.10 49 265 6.2E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 PANTHER PTHR11751:SF347 20 363 1.7E-98 T 23-04-2016 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 223 232 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 362 59.219 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 PANTHER PTHR11751 20 363 1.7E-98 T 23-04-2016 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 Pfam PF00155 Aminotransferase class I and II 34 351 9.4E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS07790 04b4db34bcb2c29eb3cbcf1cbbc9df15 364 Gene3D G3DSA:3.90.1150.10 266 362 4.2E-20 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 68 79 1.2E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 111 125 1.2E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 42 50 1.2E-13 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 15 313 9.4E-109 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PANTHER PTHR10992:SF860 8 178 7.0E-104 T 23-04-2016 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PANTHER PTHR10992:SF860 214 313 7.0E-104 T 23-04-2016 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 Pfam PF00561 alpha/beta hydrolase fold 40 297 8.3E-32 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 5.2E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 5.2E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 5.2E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 SUPERFAMILY SSF53474 10 298 4.52E-60 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 Gene3D G3DSA:3.40.50.1820 18 302 8.9E-66 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PIRSF PIRSF006431 4 316 5.6E-125 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PANTHER PTHR10992 8 178 7.0E-104 T 23-04-2016 MSIP34_RS11815 61900f6a2a27cf0d2b6a97b25212cfa7 316 PANTHER PTHR10992 214 313 7.0E-104 T 23-04-2016 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 Pfam PF03466 LysR substrate binding domain 91 291 7.4E-57 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 SUPERFAMILY SSF46785 1 105 1.28E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 SUPERFAMILY SSF53850 91 292 3.48E-51 T 23-04-2016 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.6E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 Gene3D G3DSA:3.40.190.10 176 259 2.7E-25 T 23-04-2016 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 Gene3D G3DSA:3.40.190.10 91 175 3.6E-15 T 23-04-2016 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 PANTHER PTHR30126:SF36 3 307 6.8E-106 T 23-04-2016 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 PANTHER PTHR30126 3 307 6.8E-106 T 23-04-2016 MSIP34_RS09765 f14d8f94b0bb92425bd1b43bea1867a9 308 Gene3D G3DSA:1.10.10.10 4 85 2.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-49 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 SMART SM00938 4 105 5.7E-64 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PIRSF PIRSF039144 1 112 7.4E-54 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PANTHER PTHR30115:SF12 1 112 7.3E-71 T 23-04-2016 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PRINTS PR00340 P-II protein signature 52 75 3.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PRINTS PR00340 P-II protein signature 2 17 3.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PRINTS PR00340 P-II protein signature 83 103 3.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PRINTS PR00340 P-II protein signature 23 41 3.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 SUPERFAMILY SSF54913 1 112 8.26E-45 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-42 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 PANTHER PTHR30115 1 112 7.3E-71 T 23-04-2016 MSIP34_RS12995 a4b5e87d3b74b067ca3b9154ea1901cf 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 MSIP34_RS04650 fc2988b30775cee52fcc4b1e5bb7f5d9 75 SUPERFAMILY SSF50037 4 73 9.16E-17 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal MSIP34_RS04650 fc2988b30775cee52fcc4b1e5bb7f5d9 75 PANTHER PTHR33238 4 72 6.2E-15 T 23-04-2016 MSIP34_RS04650 fc2988b30775cee52fcc4b1e5bb7f5d9 75 Pfam PF04023 FeoA domain 4 72 3.7E-20 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 MSIP34_RS04650 fc2988b30775cee52fcc4b1e5bb7f5d9 75 SMART SM00899 2 74 2.3E-17 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 MSIP34_RS01735 deece291e05cd25c5e49b19dcfa8c5d5 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.729 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01735 deece291e05cd25c5e49b19dcfa8c5d5 51 PANTHER PTHR15238 1 51 4.8E-22 T 23-04-2016 MSIP34_RS01735 deece291e05cd25c5e49b19dcfa8c5d5 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01735 deece291e05cd25c5e49b19dcfa8c5d5 51 Pfam PF00471 Ribosomal protein L33 3 49 8.2E-19 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01735 deece291e05cd25c5e49b19dcfa8c5d5 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 1.6E-24 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01735 deece291e05cd25c5e49b19dcfa8c5d5 51 SUPERFAMILY SSF57829 1 49 2.38E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 MSIP34_RS06260 01118d59567076de8c83c261450452b6 143 PANTHER PTHR12901 1 142 6.1E-45 T 23-04-2016 MSIP34_RS06260 01118d59567076de8c83c261450452b6 143 SUPERFAMILY SSF55961 1 142 1.76E-32 T 23-04-2016 MSIP34_RS06260 01118d59567076de8c83c261450452b6 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 3.4E-25 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain MSIP34_RS06260 01118d59567076de8c83c261450452b6 143 PANTHER PTHR12901:SF7 1 142 6.1E-45 T 23-04-2016 MSIP34_RS06260 01118d59567076de8c83c261450452b6 143 Gene3D G3DSA:3.30.530.20 1 142 1.4E-44 T 23-04-2016 IPR023393 START-like domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.450.40 497 675 4.6E-20 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55785 7 130 5.48E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 PANTHER PTHR10799 762 1074 6.2E-87 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55781 525 677 4.8E-23 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55785 381 498 2.62E-16 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 PANTHER PTHR10799:SF774 762 1074 6.2E-87 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.450.20 676 791 8.4E-21 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.450.20 381 496 6.9E-17 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.450.20 249 378 2.3E-19 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF08447 PAS fold 44 121 2.6E-11 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF00563 EAL domain 981 1215 1.0E-68 T 23-04-2016 IPR001633 EAL domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00267 792 964 1.6E-66 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF13185 GAF domain 523 665 1.5E-11 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.450.20 129 247 2.0E-15 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.450.20 8 126 5.7E-22 T 23-04-2016 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55785 246 375 6.42E-19 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.20.20.450 977 1228 1.5E-97 T 23-04-2016 IPR001633 EAL domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 801 962 2.4E-39 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00052 974 1220 1.2E-111 T 23-04-2016 IPR001633 EAL domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF08448 PAS fold 392 501 4.3E-19 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF08448 PAS fold 268 382 1.1E-13 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF08448 PAS fold 684 791 1.6E-9 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00091 678 744 0.0033 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00091 18 84 6.6E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00091 140 206 5.6E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00091 262 329 2.1E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00091 386 450 2.1E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF00990 Diguanylate cyclase, GGDEF domain 803 960 5.4E-48 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00086 750 792 2.9 T 23-04-2016 IPR001610 PAC motif MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00086 90 132 1.8E-5 T 23-04-2016 IPR001610 PAC motif MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00086 210 250 13.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00086 458 500 6.2 T 23-04-2016 IPR001610 PAC motif MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55785 665 790 1.92E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF141868 980 1228 8.11E-87 T 23-04-2016 IPR001633 EAL domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55785 151 258 3.63E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SMART SM00065 518 674 8.5E-8 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 SUPERFAMILY SSF55073 808 964 8.63E-48 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Pfam PF13426 PAS domain 154 247 5.4E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 137 9.4E-16 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 674 798 2.2E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 257 2.9E-17 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 387 6.8E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 383 505 2.1E-13 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00065 84f6cc17c1e5212e14706511a84dfffa 1237 Gene3D G3DSA:3.30.70.270 805 968 3.8E-55 T 23-04-2016 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 SUPERFAMILY SSF56954 37 443 5.49E-85 T 23-04-2016 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 PIRSF PIRSF001892 2 449 4.1E-126 T 23-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 PANTHER PTHR30203 43 447 3.1E-91 T 23-04-2016 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 PANTHER PTHR30203:SF8 43 447 3.1E-91 T 23-04-2016 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 Pfam PF02321 Outer membrane efflux protein 54 233 2.0E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 Pfam PF02321 Outer membrane efflux protein 259 440 2.6E-31 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS06220 0a1a3471f012353c8c2440e1fc06c09f 456 Gene3D G3DSA:1.20.1600.10 39 442 5.1E-76 T 23-04-2016 MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 PANTHER PTHR34039 4 110 1.0E-37 T 23-04-2016 MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 SUPERFAMILY SSF52980 3 105 1.11E-18 T 23-04-2016 IPR011335 Restriction endonuclease type II-like MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 Gene3D G3DSA:3.40.1350.10 8 110 7.3E-37 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 109 22.616 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 Pfam PF02021 Uncharacterised protein family UPF0102 8 95 8.1E-28 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 PANTHER PTHR34039:SF1 4 110 1.0E-37 T 23-04-2016 MSIP34_RS11635 329141c43d0e22fda7396b2d6068d658 111 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 110 3.9E-30 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 PANTHER PTHR30258:SF1 12 560 4.3E-160 T 23-04-2016 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 SUPERFAMILY SSF52540 169 560 4.84E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 Gene3D G3DSA:3.30.450.90 152 280 1.6E-42 T 23-04-2016 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 SUPERFAMILY SSF160246 11 135 1.41E-16 T 23-04-2016 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 Pfam PF00437 Type II/IV secretion system protein 183 451 1.4E-70 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 37 141 1.5E-16 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 PANTHER PTHR30258 12 560 4.3E-160 T 23-04-2016 MSIP34_RS04315 9ad3979272f77b22e158a16269a500f0 563 Gene3D G3DSA:3.40.50.300 291 560 1.4E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 PANTHER PTHR32552 169 827 3.8E-217 T 23-04-2016 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 PANTHER PTHR32552 117 146 3.8E-217 T 23-04-2016 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 810 827 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 Gene3D G3DSA:2.40.170.20 295 827 2.4E-123 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 SMART SM00965 75 125 7.8E-12 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 Pfam PF00593 TonB dependent receptor 593 826 1.2E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 177 277 5.7E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 Gene3D G3DSA:2.170.130.10 156 287 1.5E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 179 827 1.1E-113 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 SUPERFAMILY SSF56935 128 827 1.77E-122 T 23-04-2016 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 Pfam PF07660 Secretin and TonB N terminus short domain 76 124 1.2E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 PANTHER PTHR32552:SF37 169 827 3.8E-217 T 23-04-2016 MSIP34_RS02155 f799bbabb1c7d013eb47e31dcbca8102 827 PANTHER PTHR32552:SF37 117 146 3.8E-217 T 23-04-2016 MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 PANTHER PTHR30093:SF6 7 114 2.8E-26 T 23-04-2016 MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 PRINTS PR00813 Bacterial general secretion pathway protein G signature 8 33 1.8E-11 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 PRINTS PR00813 Bacterial general secretion pathway protein G signature 44 62 1.8E-11 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 3.2E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 PANTHER PTHR30093 7 114 2.8E-26 T 23-04-2016 MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 Pfam PF13633 Prokaryotic N-terminal methylation site 7 30 4.3E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 Gene3D G3DSA:3.30.700.10 9 70 2.5E-11 T 23-04-2016 MSIP34_RS04280 cb22bc9e1ce76f0bad1bbde57510f519 127 SUPERFAMILY SSF54523 9 118 1.6E-20 T 23-04-2016 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 14 577 6.0E-171 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 477 492 2.2E-26 T 23-04-2016 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 460 475 2.2E-26 T 23-04-2016 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 513 525 2.2E-26 T 23-04-2016 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 306 325 2.2E-26 T 23-04-2016 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 SUPERFAMILY SSF51621 262 558 9.95E-101 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 460 478 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 SUPERFAMILY SSF52009 137 258 1.07E-31 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 Pfam PF00391 PEP-utilising enzyme, mobile domain 168 238 8.6E-22 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PIRSF PIRSF000732 9 584 6.2E-212 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 265 553 4.1E-109 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PANTHER PTHR22931 85 563 3.0E-162 T 23-04-2016 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 SUPERFAMILY SSF47831 39 155 4.05E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 Gene3D G3DSA:3.50.30.10 145 268 1.4E-41 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 Pfam PF05524 PEP-utilising enzyme, N-terminal 15 138 3.6E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 Gene3D G3DSA:3.20.20.60 269 581 8.6E-106 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 Gene3D G3DSA:1.10.274.10 38 144 1.3E-32 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 197 208 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 MSIP34_RS01035 d103029c9ea6cd88a4e5a3fc59196a57 584 PANTHER PTHR22931:SF28 85 563 3.0E-162 T 23-04-2016 MSIP34_RS00655 5e246cc852c26357fb0d7d0644f2c8ba 390 Pfam PF00296 Luciferase-like monooxygenase 46 352 3.8E-66 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS00655 5e246cc852c26357fb0d7d0644f2c8ba 390 SUPERFAMILY SSF51679 42 382 1.83E-76 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS00655 5e246cc852c26357fb0d7d0644f2c8ba 390 PANTHER PTHR30011 51 377 2.4E-81 T 23-04-2016 MSIP34_RS00655 5e246cc852c26357fb0d7d0644f2c8ba 390 Gene3D G3DSA:3.20.20.30 45 276 9.3E-83 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS00655 5e246cc852c26357fb0d7d0644f2c8ba 390 Gene3D G3DSA:3.20.20.30 314 382 9.3E-83 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS00655 5e246cc852c26357fb0d7d0644f2c8ba 390 PANTHER PTHR30011:SF1 51 377 2.4E-81 T 23-04-2016 MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 SUPERFAMILY SSF52540 359 603 2.51E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 PANTHER PTHR24221 27 611 1.2E-234 T 23-04-2016 MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 Gene3D G3DSA:1.20.1560.10 29 351 1.4E-74 T 23-04-2016 MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 SMART SM00382 392 578 6.1E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 22 603 3.4E-238 T 23-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 Gene3D G3DSA:3.40.50.300 364 596 3.3E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 Pfam PF00664 ABC transporter transmembrane region 42 317 1.4E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 SUPERFAMILY SSF90123 29 346 1.7E-71 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS01850 1c524b1a4ec44a4ba73a069479d13928 628 Pfam PF00005 ABC transporter 383 532 2.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 562 2.6E-204 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 699 24.057 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 Pfam PF05746 DALR anticodon binding domain 593 692 6.3E-9 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 PANTHER PTHR30075 1 701 1.8E-258 T 23-04-2016 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 Gene3D G3DSA:1.10.730.10 594 692 8.1E-5 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 329 345 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 51 63 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 407 426 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 257 272 1.1E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 SMART SM00836 596 699 0.0017 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 SUPERFAMILY SSF109604 351 503 1.41E-18 T 23-04-2016 MSIP34_RS10700 62b820c89c45ade3acda50d9a72b89c7 701 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 699 1.5E-200 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 Gene3D G3DSA:3.40.50.300 110 351 4.5E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 PANTHER PTHR30486:SF3 12 369 4.8E-159 T 23-04-2016 MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 SMART SM00382 129 254 0.0095 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 Pfam PF00437 Type II/IV secretion system protein 78 253 3.2E-37 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 11 350 2.6E-143 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 PANTHER PTHR30486 12 369 4.8E-159 T 23-04-2016 MSIP34_RS03165 d964e837390f71761b51833c4aad998f 378 SUPERFAMILY SSF52540 4 344 2.13E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 301 1.0E-68 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 300 2.2E-32 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 Gene3D G3DSA:3.90.78.10 229 304 9.7E-36 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 Pfam PF01565 FAD binding domain 33 158 6.5E-19 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 310 91.154 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 PANTHER PTHR21071 1 308 9.9E-111 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 SUPERFAMILY SSF56194 198 302 1.24E-38 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 Gene3D G3DSA:3.30.465.10 90 228 1.1E-39 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 PANTHER PTHR21071:SF4 1 308 9.9E-111 T 23-04-2016 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 SUPERFAMILY SSF56176 18 206 1.56E-37 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 MSIP34_RS02355 00249e002f1f2691f93e0efd9bcae704 310 Gene3D G3DSA:3.30.43.10 5 79 1.6E-15 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 Gene3D G3DSA:1.10.220.30 3 70 1.8E-15 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PANTHER PTHR30534:SF0 5 331 8.6E-106 T 23-04-2016 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 Pfam PF14841 FliG middle domain 114 185 5.8E-27 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 6 328 5.7E-111 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 112 135 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 Pfam PF01706 FliG C-terminal domain 215 322 1.6E-40 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PIRSF PIRSF003161 1 331 9.2E-117 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 SUPERFAMILY SSF48029 3 114 4.97E-23 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 SUPERFAMILY SSF48029 112 323 2.35E-68 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 Gene3D G3DSA:1.10.220.30 72 182 4.9E-32 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 Gene3D G3DSA:1.10.220.30 193 330 1.0E-42 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 PANTHER PTHR30534 5 331 8.6E-106 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 MSIP34_RS03870 0caee2c1c9093a5630a9261574ebf0e8 331 Pfam PF14842 FliG N-terminal domain 5 102 5.7E-32 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 2.7E-59 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 2.7E-59 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 2.7E-59 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 2.7E-59 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 2.7E-59 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 2.7E-59 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PANTHER PTHR10520:SF7 7 277 6.7E-146 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 SUPERFAMILY SSF53328 89 284 4.32E-62 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PIRSF PIRSF036480 2 284 2.2E-118 T 23-04-2016 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 SUPERFAMILY SSF55021 4 82 1.67E-15 T 23-04-2016 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 Pfam PF00551 Formyl transferase 89 265 6.0E-41 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 Gene3D G3DSA:3.40.50.170 88 280 1.0E-60 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 5.9E-123 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 Pfam PF01842 ACT domain 6 46 5.9E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 47.9 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 PANTHER PTHR10520 7 277 6.7E-146 T 23-04-2016 MSIP34_RS13050 1e6e23d874098f59c9bbae0ec3e0c23b 284 Gene3D G3DSA:3.30.70.260 2 82 4.9E-22 T 23-04-2016 MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 PANTHER PTHR24031:SF261 7 419 1.5E-179 T 23-04-2016 MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 PANTHER PTHR24031 7 419 1.5E-179 T 23-04-2016 MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 SUPERFAMILY SSF52540 82 368 6.74E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 Gene3D G3DSA:3.40.50.300 5 219 7.8E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 SMART SM00490 266 347 2.0E-30 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 Gene3D G3DSA:3.40.50.300 220 380 6.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 SMART SM00487 25 230 1.8E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 Pfam PF00271 Helicase conserved C-terminal domain 239 347 4.9E-28 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS08810 2ea495aa38c90307dbd5be6ee9da8b78 459 Pfam PF00270 DEAD/DEAH box helicase 30 204 2.4E-51 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Gene3D G3DSA:3.30.870.10 322 506 7.1E-82 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 PANTHER PTHR30218 7 694 0.0 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 SUPERFAMILY SSF140356 8 110 1.83E-37 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 PIRSF PIRSF015589 4 690 4.9E-282 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 11 116 4.2E-36 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 SUPERFAMILY SSF143724 114 319 8.04E-68 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Gene3D G3DSA:3.30.870.10 507 687 6.6E-73 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 SUPERFAMILY SSF56024 506 686 2.92E-71 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 SUPERFAMILY SSF56024 322 498 1.92E-59 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Pfam PF02503 Polyphosphate kinase middle domain 126 327 1.7E-60 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 10 684 6.6E-302 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 336 683 1.8E-157 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 PANTHER PTHR30218:SF0 7 694 0.0 T 23-04-2016 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 8 688 33.506 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 MSIP34_RS00885 a8521b89f076cef2850db8ca9e4c0b48 694 Gene3D G3DSA:3.30.1840.10 114 306 1.7E-71 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 MSIP34_RS13945 91e23519ca567ae722da778cb1dabebf 67 SUPERFAMILY SSF54285 3 66 4.8E-17 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MSIP34_RS13945 91e23519ca567ae722da778cb1dabebf 67 Gene3D G3DSA:3.10.20.30 2 67 1.7E-24 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS13945 91e23519ca567ae722da778cb1dabebf 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 1.6E-20 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis MSIP34_RS13945 91e23519ca567ae722da778cb1dabebf 67 PANTHER PTHR34472 1 67 3.7E-20 T 23-04-2016 MSIP34_RS13945 91e23519ca567ae722da778cb1dabebf 67 Pfam PF02597 ThiS family 4 67 1.1E-13 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 MSIP34_RS13945 91e23519ca567ae722da778cb1dabebf 67 PANTHER PTHR34472:SF1 1 67 3.7E-20 T 23-04-2016 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 393 676 9.8E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 341 3.4E-111 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 PANTHER PTHR22893 6 433 5.4E-74 T 23-04-2016 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Gene3D G3DSA:3.20.20.70 5 382 2.5E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 SUPERFAMILY SSF51905 496 676 3.45E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Gene3D G3DSA:3.40.50.720 387 406 1.8E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Gene3D G3DSA:3.40.50.720 454 490 1.8E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 PRINTS PR00419 Adrenodoxin reductase family signature 392 414 4.3E-5 T 23-04-2016 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 PRINTS PR00419 Adrenodoxin reductase family signature 415 428 4.3E-5 T 23-04-2016 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Gene3D G3DSA:3.50.50.60 407 445 3.9E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Gene3D G3DSA:3.50.50.60 670 699 3.9E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 SUPERFAMILY SSF51971 343 496 3.53E-27 T 23-04-2016 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 SUPERFAMILY SSF51395 4 368 4.89E-89 T 23-04-2016 MSIP34_RS12365 f4d085852ad708fb382ee4a3b49da5c1 730 Gene3D G3DSA:3.50.50.60 491 662 2.3E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 PANTHER PTHR19278:SF36 7 217 1.0E-102 T 23-04-2016 MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 Pfam PF00156 Phosphoribosyl transferase domain 46 163 1.2E-15 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 15 189 2.3E-57 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 Gene3D G3DSA:3.40.50.2020 11 215 1.3E-76 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 PANTHER PTHR19278 7 217 1.0E-102 T 23-04-2016 MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 33.216 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS12715 32c27bd1e455413f9bfd2bbef4dfe40e 219 SUPERFAMILY SSF53271 9 215 2.07E-48 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 SMART SM00257 52 96 5.2E-11 T 23-04-2016 IPR018392 LysM domain MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 Pfam PF01551 Peptidase family M23 236 329 3.9E-31 T 23-04-2016 IPR016047 Peptidase M23 MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 SUPERFAMILY SSF51261 208 333 1.92E-47 T 23-04-2016 IPR011055 Duplicated hybrid motif MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 Gene3D G3DSA:2.70.70.10 196 334 1.2E-40 T 23-04-2016 MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 SUPERFAMILY SSF54106 52 95 4.71E-10 T 23-04-2016 IPR018392 LysM domain MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 PANTHER PTHR21666:SF222 218 334 2.1E-42 T 23-04-2016 MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 Gene3D G3DSA:3.10.350.10 52 95 3.5E-15 T 23-04-2016 IPR018392 LysM domain MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 Pfam PF01476 LysM domain 53 95 1.0E-12 T 23-04-2016 IPR018392 LysM domain MSIP34_RS05015 808c49fab55a88300b3c71c1923c4c8a 338 PANTHER PTHR21666 218 334 2.1E-42 T 23-04-2016 MSIP34_RS06940 08593b1abfe2ce8c159002fb16746255 786 SUPERFAMILY SSF53955 537 611 2.78E-8 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS06940 08593b1abfe2ce8c159002fb16746255 786 SUPERFAMILY SSF51261 23 161 2.09E-8 T 23-04-2016 IPR011055 Duplicated hybrid motif MSIP34_RS06940 08593b1abfe2ce8c159002fb16746255 786 Pfam PF01551 Peptidase family M23 37 161 4.3E-7 T 23-04-2016 IPR016047 Peptidase M23 MSIP34_RS06940 08593b1abfe2ce8c159002fb16746255 786 Gene3D G3DSA:2.70.70.10 19 164 3.5E-14 T 23-04-2016 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 Pfam PF00593 TonB dependent receptor 583 827 9.9E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 PANTHER PTHR32552 164 828 8.6E-189 T 23-04-2016 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 PANTHER PTHR32552 123 141 8.6E-189 T 23-04-2016 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 174 826 4.3E-130 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 SUPERFAMILY SSF56935 132 828 3.78E-149 T 23-04-2016 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 Gene3D G3DSA:2.170.130.10 129 287 5.4E-40 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 Pfam PF07715 TonB-dependent Receptor Plug Domain 173 275 5.7E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 SMART SM00965 72 123 2.7E-13 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 Pfam PF07660 Secretin and TonB N terminus short domain 75 122 6.5E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 Gene3D G3DSA:2.40.170.20 290 828 8.2E-156 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 PANTHER PTHR32552:SF17 164 828 8.6E-189 T 23-04-2016 MSIP34_RS08030 46c1e4611644066cd9509a6aa0296985 828 PANTHER PTHR32552:SF17 123 141 8.6E-189 T 23-04-2016 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Pfam PF10091 Putative glucoamylase 1383 1572 3.5E-15 T 23-04-2016 IPR019282 Domain of unknown function DUF2329 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Gene3D G3DSA:2.70.98.40 1615 1910 2.3E-101 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Gene3D G3DSA:2.70.98.40 2109 2431 5.0E-95 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 SUPERFAMILY SSF74650 1611 1880 3.77E-82 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2402 2828 1.0E-119 T 23-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 PANTHER PTHR37469:SF2 1933 2907 0.0 T 23-04-2016 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 PANTHER PTHR37469:SF2 62 1917 0.0 T 23-04-2016 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 SUPERFAMILY SSF48208 2378 2887 4.63E-92 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Pfam PF06165 Glycosyltransferase family 36 2132 2371 3.1E-80 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Pfam PF06165 Glycosyltransferase family 36 1626 1877 3.4E-81 T 23-04-2016 IPR010383 Glycosyl hydrolase 94 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 SMART SM01068 1602 1663 4.0E-28 T 23-04-2016 IPR009342 Putative carbohydrate binding domain MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 SMART SM01068 2109 2174 2.2E-28 T 23-04-2016 IPR009342 Putative carbohydrate binding domain MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 PANTHER PTHR37469 1933 2907 0.0 T 23-04-2016 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 PANTHER PTHR37469 62 1917 0.0 T 23-04-2016 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 SUPERFAMILY SSF74650 2109 2373 3.77E-85 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Gene3D G3DSA:3.90.1200.10 170 226 2.5E-4 T 23-04-2016 MSIP34_RS13360 e67c770f7469e1f2731cc30b4990cb64 2907 Gene3D G3DSA:2.60.420.10 2824 2862 7.7E-7 T 23-04-2016 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 396 413 1.6E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 413 433 1.6E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 SMART SM00448 5 116 1.9E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Gene3D G3DSA:1.10.8.60 300 369 4.5E-17 T 23-04-2016 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Gene3D G3DSA:3.40.50.300 133 297 2.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 SUPERFAMILY SSF52172 3 178 6.83E-39 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 SUPERFAMILY SSF52540 134 367 1.18E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Gene3D G3DSA:3.40.50.2300 4 122 1.3E-32 T 23-04-2016 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 SUPERFAMILY SSF46689 339 432 1.22E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 430 2.6E-16 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 338 347 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Pfam PF00158 Sigma-54 interaction domain 134 291 3.6E-46 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 PANTHER PTHR32071 8 443 9.2E-166 T 23-04-2016 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 PANTHER PTHR32071:SF28 8 443 9.2E-166 T 23-04-2016 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Gene3D G3DSA:1.10.10.60 385 429 7.8E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 Pfam PF00072 Response regulator receiver domain 8 115 2.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS01205 089b69f09749df7c817a40bcb45ff02e 443 SMART SM00382 154 288 1.4E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 Gene3D G3DSA:3.30.70.270 477 622 2.0E-15 T 23-04-2016 MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 564 1.9E-11 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 SMART SM00052 78 319 4.2E-32 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 PANTHER PTHR33121:SF10 90 363 3.4E-40 T 23-04-2016 MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 SUPERFAMILY SSF103190 680 778 2.9E-10 T 23-04-2016 IPR029151 Periplasmic sensor domain-like MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 PANTHER PTHR33121 90 363 3.4E-40 T 23-04-2016 MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 Gene3D G3DSA:3.30.450.20 675 775 3.0E-10 T 23-04-2016 MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 552 8.3E-14 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 SUPERFAMILY SSF141868 91 315 9.81E-56 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 Gene3D G3DSA:3.20.20.450 90 316 1.3E-52 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 Pfam PF00563 EAL domain 90 314 3.4E-48 T 23-04-2016 IPR001633 EAL domain MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 SUPERFAMILY SSF55073 477 570 1.26E-16 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS06600 b7415b72b5d2c5bef4d711478dcb5e29 785 SMART SM00267 452 614 6.1E-5 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 Gene3D G3DSA:3.40.50.2020 1 156 1.9E-69 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 SMART SM01400 1 118 7.1E-72 T 23-04-2016 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 PANTHER PTHR10210:SF41 1 309 4.9E-171 T 23-04-2016 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 Gene3D G3DSA:3.40.50.2020 157 284 3.8E-52 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 PANTHER PTHR10210 1 309 4.9E-171 T 23-04-2016 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 3.5E-45 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 310 47.548 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 309 8.7E-118 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 SUPERFAMILY SSF53271 66 300 1.55E-58 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS10155 bab3840878c0234fbd7fdb847b8f4bd6 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 200 309 1.8E-29 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 Gene3D G3DSA:3.30.70.270 347 516 1.8E-56 T 23-04-2016 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 Pfam PF00563 EAL domain 528 766 5.2E-68 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 SMART SM00091 221 287 8.2E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 SMART SM00267 335 512 6.9E-60 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 SUPERFAMILY SSF55073 351 514 8.63E-49 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 SUPERFAMILY SSF141868 528 774 2.22E-82 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 225 341 1.6E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 Gene3D G3DSA:3.30.450.20 211 326 7.4E-21 T 23-04-2016 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 SUPERFAMILY SSF55785 233 344 3.44E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 Pfam PF00989 PAS fold 227 331 4.1E-13 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 PANTHER PTHR33121:SF13 171 176 1.5E-76 T 23-04-2016 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 PANTHER PTHR33121:SF13 472 776 1.5E-76 T 23-04-2016 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 SMART SM00052 522 771 4.5E-104 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 Gene3D G3DSA:3.20.20.450 526 774 2.5E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 508 6.0E-49 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 PANTHER PTHR33121 171 176 1.5E-76 T 23-04-2016 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 PANTHER PTHR33121 472 776 1.5E-76 T 23-04-2016 MSIP34_RS05965 549b4be73113e54697664329b66d790a 776 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 511 2.3E-41 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 PANTHER PTHR26402:SF344 8 121 2.3E-50 T 23-04-2016 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 PANTHER PTHR26402 8 121 2.3E-50 T 23-04-2016 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 SUPERFAMILY SSF52172 9 166 8.82E-33 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 Pfam PF02954 Bacterial regulatory protein, Fis family 137 177 1.1E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 Pfam PF00072 Response regulator receiver domain 11 119 4.5E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 SMART SM00448 8 119 1.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 Gene3D G3DSA:3.40.50.2300 9 121 1.3E-31 T 23-04-2016 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 Gene3D G3DSA:1.10.10.60 124 178 2.4E-28 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 160 180 1.1E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS02720 f95e984e8eb6b437da7874c8bc6d7c1b 181 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 143 160 1.1E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 Gene3D G3DSA:2.40.10.10 40 110 1.9E-12 T 23-04-2016 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 Gene3D G3DSA:1.25.40.10 225 324 2.0E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 Pfam PF13365 Trypsin-like peptidase domain 47 175 3.2E-20 T 23-04-2016 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 SMART SM00028 255 288 2.1E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 PRINTS PR00839 V8 serine protease family signature 47 64 4.3E-5 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 PRINTS PR00839 V8 serine protease family signature 167 179 4.3E-5 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 PRINTS PR00839 V8 serine protease family signature 150 166 4.3E-5 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 SUPERFAMILY SSF50494 1 201 1.55E-30 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 Pfam PF07719 Tetratricopeptide repeat 256 288 5.7E-6 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 Gene3D G3DSA:2.40.10.10 111 201 9.5E-16 T 23-04-2016 MSIP34_RS06435 3f27aaa1d9c4d7288af867b8d661151f 336 SUPERFAMILY SSF48452 218 311 2.52E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS02580 dab568451db7273bc1a994a1fbc4bc94 64 Gene3D G3DSA:3.30.50.10 10 60 1.6E-21 T 23-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 MSIP34_RS02580 dab568451db7273bc1a994a1fbc4bc94 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 8 60 15.662 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 MSIP34_RS02580 dab568451db7273bc1a994a1fbc4bc94 64 PANTHER PTHR36150 7 64 7.5E-16 T 23-04-2016 MSIP34_RS02580 dab568451db7273bc1a994a1fbc4bc94 64 SUPERFAMILY SSF57716 10 55 4.7E-17 T 23-04-2016 MSIP34_RS02580 dab568451db7273bc1a994a1fbc4bc94 64 PANTHER PTHR36150:SF1 7 64 7.5E-16 T 23-04-2016 MSIP34_RS02580 dab568451db7273bc1a994a1fbc4bc94 64 Pfam PF03884 Domain of unknown function (DUF329) 12 58 1.3E-22 T 23-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 PANTHER PTHR30576:SF0 36 473 9.4E-146 T 23-04-2016 MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 Pfam PF02397 Bacterial sugar transferase 282 466 3.9E-55 T 23-04-2016 IPR003362 Bacterial sugar transferase MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 34 473 8.7E-138 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 Pfam PF13727 CoA-binding domain 77 246 2.3E-27 T 23-04-2016 MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 50 473 2.1E-157 T 23-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 PANTHER PTHR30576 36 473 9.4E-146 T 23-04-2016 MSIP34_RS09315 d2753ed7e062df5b723da216c36ecc6f 473 SUPERFAMILY SSF51735 148 276 1.77E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02450 5b34bc6098a88b7bd4419736ed1264d5 183 Gene3D G3DSA:3.40.30.10 12 147 4.1E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02450 5b34bc6098a88b7bd4419736ed1264d5 183 PANTHER PTHR10681 12 183 1.0E-54 T 23-04-2016 MSIP34_RS02450 5b34bc6098a88b7bd4419736ed1264d5 183 PANTHER PTHR10681:SF91 12 183 1.0E-54 T 23-04-2016 MSIP34_RS02450 5b34bc6098a88b7bd4419736ed1264d5 183 Pfam PF00578 AhpC/TSA family 12 135 2.4E-18 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS02450 5b34bc6098a88b7bd4419736ed1264d5 183 SUPERFAMILY SSF52833 7 182 3.02E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 Pfam PF00691 OmpA family 111 205 1.1E-21 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 Pfam PF13488 Glycine zipper 32 78 1.9E-8 T 23-04-2016 MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 PANTHER PTHR30128 11 222 2.3E-46 T 23-04-2016 MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 Gene3D G3DSA:3.30.1330.60 95 211 3.1E-39 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 SUPERFAMILY SSF103088 99 211 3.53E-37 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 PRINTS PR01021 OMPA domain signature 141 156 1.7E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 PRINTS PR01021 OMPA domain signature 156 172 1.7E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS07690 ab3bcb891502cbf7b5fea54459ce084a 222 PRINTS PR01021 OMPA domain signature 111 133 1.7E-13 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS11095 fd66e3eb901deaa3fb7824d3eda8dc8b 429 Pfam PF02321 Outer membrane efflux protein 254 426 1.0E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS11095 fd66e3eb901deaa3fb7824d3eda8dc8b 429 Pfam PF02321 Outer membrane efflux protein 69 234 7.7E-12 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS11095 fd66e3eb901deaa3fb7824d3eda8dc8b 429 Gene3D G3DSA:1.20.1600.10 51 426 5.3E-27 T 23-04-2016 MSIP34_RS11095 fd66e3eb901deaa3fb7824d3eda8dc8b 429 SUPERFAMILY SSF56954 6 428 4.84E-39 T 23-04-2016 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 PANTHER PTHR10742 12 437 2.3E-45 T 23-04-2016 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 Gene3D G3DSA:3.50.50.60 385 437 3.9E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 Gene3D G3DSA:3.50.50.60 11 84 3.9E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 Gene3D G3DSA:3.50.50.60 205 293 3.9E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 Gene3D G3DSA:3.50.50.60 152 157 3.9E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 PRINTS PR00419 Adrenodoxin reductase family signature 35 48 9.8E-5 T 23-04-2016 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 PRINTS PR00419 Adrenodoxin reductase family signature 12 34 9.8E-5 T 23-04-2016 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 TIGRFAM TIGR03467 HpnE: squalene-associated FAD-dependent desaturase 13 437 9.9E-141 T 23-04-2016 IPR017830 Squalene-associated FAD-dependent desaturase MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 Pfam PF01593 Flavin containing amine oxidoreductase 21 437 1.3E-37 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 SUPERFAMILY SSF51905 398 437 2.3E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS07225 7a9691534816bb1ba8268adfa85f68ca 449 SUPERFAMILY SSF51905 11 315 2.3E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 SMART SM00382 27 214 4.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 PANTHER PTHR24220:SF470 3 215 6.7E-104 T 23-04-2016 MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 PANTHER PTHR24220 3 215 6.7E-104 T 23-04-2016 MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 Pfam PF00005 ABC transporter 18 165 3.3E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 1.2E-83 T 23-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 SUPERFAMILY SSF52540 1 215 4.76E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09735 846e33720a464ed651ebe2024e0e95e7 217 Gene3D G3DSA:3.40.50.300 1 215 1.9E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12835 21a721a9b7c7975253e6a52d433d175b 482 SMART SM01236 153 251 1.2E-28 T 23-04-2016 MSIP34_RS12835 21a721a9b7c7975253e6a52d433d175b 482 Gene3D G3DSA:1.20.910.10 151 283 1.3E-5 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS12835 21a721a9b7c7975253e6a52d433d175b 482 Pfam PF14518 Iron-containing redox enzyme 122 289 2.2E-33 T 23-04-2016 IPR028201 PqqC-like protein MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 Gene3D G3DSA:1.10.10.60 228 272 7.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 PANTHER PTHR11019:SF75 60 272 8.4E-33 T 23-04-2016 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 SUPERFAMILY SSF46689 175 225 2.11E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 PANTHER PTHR11019 60 272 8.4E-33 T 23-04-2016 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 Gene3D G3DSA:1.10.10.60 170 227 1.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 SMART SM00342 191 273 8.9E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 Pfam PF12833 Helix-turn-helix domain 197 272 1.4E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13430 7fb1c01024171d5e541a50ad6da78ce6 275 SUPERFAMILY SSF46689 227 272 6.72E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 Gene3D G3DSA:3.40.190.10 92 191 1.2E-24 T 23-04-2016 MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 SUPERFAMILY SSF46785 3 111 2.34E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 Gene3D G3DSA:1.10.10.10 3 88 5.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.5E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 PANTHER PTHR30537:SF17 1 309 1.7E-95 T 23-04-2016 MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 PANTHER PTHR30537 1 309 1.7E-95 T 23-04-2016 MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 Pfam PF03466 LysR substrate binding domain 88 302 8.3E-39 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS11570 7146d0038fd7c2c3a54f150b232129b1 310 SUPERFAMILY SSF53850 88 306 2.17E-41 T 23-04-2016 MSIP34_RS02270 64721430cc38eff9639f5a33d057001e 476 PANTHER PTHR34595 4 475 4.1E-290 T 23-04-2016 MSIP34_RS02270 64721430cc38eff9639f5a33d057001e 476 Pfam PF14403 Circularly permuted ATP-grasp type 2 75 449 2.2E-161 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 MSIP34_RS02270 64721430cc38eff9639f5a33d057001e 476 PIRSF PIRSF005522 1 476 1.7E-229 T 23-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 MSIP34_RS02270 64721430cc38eff9639f5a33d057001e 476 PANTHER PTHR34595:SF3 4 475 4.1E-290 T 23-04-2016 MSIP34_RS02270 64721430cc38eff9639f5a33d057001e 476 SUPERFAMILY SSF56059 319 464 7.96E-65 T 23-04-2016 MSIP34_RS02270 64721430cc38eff9639f5a33d057001e 476 SUPERFAMILY SSF56059 19 212 7.96E-65 T 23-04-2016 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Gene3D G3DSA:1.10.8.60 315 417 3.6E-36 T 23-04-2016 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 SMART SM00994 10 49 2.5E-24 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 SMART SM00382 111 263 7.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 PANTHER PTHR11262 6 416 3.3E-248 T 23-04-2016 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 2.1E-48 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Gene3D G3DSA:3.40.50.300 63 253 1.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Gene3D G3DSA:3.40.50.300 293 310 1.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 414 53.084 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 410 6.3E-203 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 SUPERFAMILY SSF57716 11 46 1.14E-11 T 23-04-2016 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Pfam PF06689 ClpX C4-type zinc finger 11 48 1.0E-20 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 316 389 9.9E-14 T 23-04-2016 IPR019489 Clp ATPase, C-terminal MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 SUPERFAMILY SSF52540 59 398 5.16E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07430 db3ed5ab6a0fc70ee435b925df968b31 423 SMART SM01086 316 410 9.1E-33 T 23-04-2016 IPR019489 Clp ATPase, C-terminal MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 Gene3D G3DSA:3.30.70.260 354 423 4.5E-10 T 23-04-2016 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 PANTHER PTHR21499 1 369 6.3E-133 T 23-04-2016 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 Gene3D G3DSA:3.30.360.10 149 298 6.3E-58 T 23-04-2016 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 Gene3D G3DSA:3.40.50.720 1 148 6.0E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 SUPERFAMILY SSF55347 137 302 2.42E-54 T 23-04-2016 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 SUPERFAMILY SSF55021 352 420 1.26E-12 T 23-04-2016 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 6.1E-22 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 Pfam PF00742 Homoserine dehydrogenase 137 315 1.1E-65 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 PANTHER PTHR21499:SF2 1 369 6.3E-133 T 23-04-2016 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 SUPERFAMILY SSF51735 1 158 5.59E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 PIRSF PIRSF000098 1 435 9.3E-166 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS04465 3dd9527c2cd2f6a3a56e7740081a9cfb 437 Pfam PF01842 ACT domain 354 421 4.0E-16 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 PANTHER PTHR11019 20 309 4.4E-62 T 23-04-2016 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 PANTHER PTHR11019:SF137 20 309 4.4E-62 T 23-04-2016 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 SUPERFAMILY SSF51215 36 115 3.4E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 Pfam PF02311 AraC-like ligand binding domain 49 123 1.6E-4 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 Gene3D G3DSA:2.60.120.280 54 116 4.5E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 Gene3D G3DSA:1.10.10.60 258 304 2.5E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 Pfam PF12833 Helix-turn-helix domain 224 302 7.1E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 SMART SM00342 218 301 9.1E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS06410 eaff5ff95ed2fa9b1a96ee1276296ffa 309 SUPERFAMILY SSF46689 258 304 1.25E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Pfam PF00384 Molybdopterin oxidoreductase 59 486 4.2E-89 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 3 51 4.4E-19 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 7 25 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Gene3D G3DSA:2.20.25.90 2 51 2.1E-21 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 PANTHER PTHR11615 3 718 3.9E-246 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Gene3D G3DSA:3.40.50.740 63 264 1.5E-49 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 SUPERFAMILY SSF53706 3 526 5.23E-201 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Pfam PF04324 BFD-like [2Fe-2S] binding domain 850 896 9.2E-8 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Gene3D G3DSA:2.40.40.20 571 706 5.2E-40 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 SMART SM00926 2 55 4.0E-21 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 SUPERFAMILY SSF50692 557 701 4.02E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 PANTHER PTHR11615:SF119 3 718 3.9E-246 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Gene3D G3DSA:3.40.50.740 265 566 1.1E-67 T 23-04-2016 MSIP34_RS01785 86f26c266cf80fb2b05979cd9defaa6d 904 Pfam PF01568 Molydopterin dinucleotide binding domain 584 694 1.3E-26 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 MSIP34_RS09675 198af8604480b07fbdaca10c8405f070 378 Pfam PF13439 Glycosyltransferase Family 4 18 170 9.7E-24 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS09675 198af8604480b07fbdaca10c8405f070 378 PANTHER PTHR12526:SF141 12 368 3.0E-39 T 23-04-2016 MSIP34_RS09675 198af8604480b07fbdaca10c8405f070 378 PANTHER PTHR12526 12 368 3.0E-39 T 23-04-2016 MSIP34_RS09675 198af8604480b07fbdaca10c8405f070 378 Pfam PF00534 Glycosyl transferases group 1 192 343 4.0E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS09675 198af8604480b07fbdaca10c8405f070 378 SUPERFAMILY SSF53756 5 368 8.24E-53 T 23-04-2016 MSIP34_RS09675 198af8604480b07fbdaca10c8405f070 378 Gene3D G3DSA:3.40.50.2000 189 316 9.0E-15 T 23-04-2016 MSIP34_RS08175 f4dd33aa755bd7730d4b41a6f5f4c410 171 Gene3D G3DSA:1.10.530.10 15 113 1.4E-9 T 23-04-2016 MSIP34_RS08175 f4dd33aa755bd7730d4b41a6f5f4c410 171 Pfam PF01464 Transglycosylase SLT domain 30 88 3.9E-6 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS08175 f4dd33aa755bd7730d4b41a6f5f4c410 171 SUPERFAMILY SSF53955 19 113 1.88E-9 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 188 201 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 320 1.6E-104 T 23-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 SUPERFAMILY SSF53383 18 320 1.65E-57 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 Gene3D G3DSA:3.40.640.10 48 231 9.6E-47 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 PANTHER PTHR11751 1 326 6.0E-51 T 23-04-2016 MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 Pfam PF00155 Aminotransferase class I and II 62 292 5.2E-31 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 PANTHER PTHR11751:SF3 1 326 6.0E-51 T 23-04-2016 MSIP34_RS00750 4b345f802bf3b2a25cc4a0d5ce5e7b35 334 Gene3D G3DSA:3.90.1150.10 232 324 0.001 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Pfam PF01842 ACT domain 277 340 1.2E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Pfam PF01817 Chorismate mutase type II 9 84 5.5E-23 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 PIRSF PIRSF001500 1 358 2.0E-141 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 76 1.4E-25 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Gene3D G3DSA:1.20.59.10 2 83 7.9E-22 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Gene3D G3DSA:3.30.70.260 270 356 6.6E-30 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 PANTHER PTHR21022:SF0 1 355 6.9E-131 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 SUPERFAMILY SSF53850 87 273 3.04E-59 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 241 263 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 PANTHER PTHR21022 1 355 6.9E-131 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 303 310 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Gene3D G3DSA:3.40.190.10 84 171 2.4E-34 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 SUPERFAMILY SSF55021 260 355 2.75E-27 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 SMART SM00830 9 86 1.1E-30 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Pfam PF00800 Prephenate dehydratase 88 266 1.2E-64 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 Gene3D G3DSA:3.40.190.10 172 253 3.8E-28 T 23-04-2016 MSIP34_RS07800 a58ae34640bac6b461526277d5f6fe03 358 SUPERFAMILY SSF48600 4 89 1.15E-20 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 19 336 2.1E-111 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 95 307 3.0E-51 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 Gene3D G3DSA:3.40.50.2000 192 308 2.1E-26 T 23-04-2016 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 SUPERFAMILY SSF53756 19 308 5.49E-64 T 23-04-2016 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 Gene3D G3DSA:3.40.50.2000 19 174 1.2E-35 T 23-04-2016 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 PANTHER PTHR30160 9 307 2.0E-82 T 23-04-2016 MSIP34_RS09635 b86547b431bdd1fe3f2400a4c0b82cd8 340 PANTHER PTHR30160:SF8 9 307 2.0E-82 T 23-04-2016 MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 PANTHER PTHR38038:SF1 61 549 1.5E-34 T 23-04-2016 MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 PANTHER PTHR38038 61 549 1.5E-34 T 23-04-2016 MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 SUPERFAMILY SSF53822 234 544 3.91E-52 T 23-04-2016 IPR028082 Periplasmic binding protein-like I MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 Gene3D G3DSA:3.40.50.2300 234 338 4.4E-31 T 23-04-2016 MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 Gene3D G3DSA:3.40.50.2300 468 533 4.4E-31 T 23-04-2016 MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 Gene3D G3DSA:3.40.50.2300 342 467 3.1E-19 T 23-04-2016 MSIP34_RS11630 7c72744adad96ad030d1b700a0b27d2d 549 Pfam PF04348 LppC putative lipoprotein 67 539 6.7E-55 T 23-04-2016 IPR007443 Penicillin-binding protein activator LpoA MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 Pfam PF08281 Sigma-70, region 4 136 183 2.1E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 SUPERFAMILY SSF88659 125 188 6.54E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 Gene3D G3DSA:1.10.10.10 126 190 6.2E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 SUPERFAMILY SSF88946 6 110 1.35E-30 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 188 1.1E-31 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 4 192 1.4E-95 T 23-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 Gene3D G3DSA:1.10.1740.10 6 114 1.7E-36 T 23-04-2016 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 PANTHER PTHR30173 1 199 7.0E-51 T 23-04-2016 MSIP34_RS09040 eefd165030f0535c50f822cafd4232c3 200 Pfam PF04542 Sigma-70 region 2 26 88 5.4E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 Gene3D G3DSA:3.40.50.980 4 135 1.0E-11 T 23-04-2016 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 Pfam PF00501 AMP-binding enzyme 11 139 8.1E-11 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 PANTHER PTHR24096:SF151 189 368 2.2E-18 T 23-04-2016 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 PANTHER PTHR24096:SF151 3 168 2.2E-18 T 23-04-2016 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 PANTHER PTHR24096 189 368 2.2E-18 T 23-04-2016 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 PANTHER PTHR24096 3 168 2.2E-18 T 23-04-2016 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 SUPERFAMILY SSF56801 4 277 3.14E-21 T 23-04-2016 MSIP34_RS09840 c5daeed9c7c80cab7322be7aae5fccac 413 SUPERFAMILY SSF56801 333 368 3.14E-21 T 23-04-2016 MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 Gene3D G3DSA:3.40.50.300 2 229 1.6E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 3.4E-57 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 PANTHER PTHR13748:SF4 1 329 1.0E-198 T 23-04-2016 MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 PANTHER PTHR13748:SF4 345 385 1.0E-198 T 23-04-2016 MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 Gene3D G3DSA:3.30.1220.10 242 371 6.5E-19 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 371 2.5E-30 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 SMART SM00833 256 371 1.2E-52 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 PANTHER PTHR13748 1 329 1.0E-198 T 23-04-2016 MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 PANTHER PTHR13748 345 385 1.0E-198 T 23-04-2016 MSIP34_RS04535 179db0b6f7ed3b1b7b84478dc2194deb 405 SUPERFAMILY SSF52540 2 320 3.4E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SUPERFAMILY SSF53756 381 618 1.54E-20 T 23-04-2016 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Gene3D G3DSA:1.25.40.10 257 354 5.1E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 35 114 3.1E-8 T 23-04-2016 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 PANTHER PTHR23083 21 351 1.4E-70 T 23-04-2016 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Pfam PF00515 Tetratricopeptide repeat 294 326 4.6E-12 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Gene3D G3DSA:1.25.40.10 12 256 4.0E-55 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Pfam PF13424 Tetratricopeptide repeat 156 220 4.3E-8 T 23-04-2016 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 21 54 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 191 224 0.16 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 259 292 0.0015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 293 326 9.6E-11 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 89 122 1.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 123 156 1.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 157 190 1.6E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 55 88 13.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SMART SM00028 225 258 0.049 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Gene3D G3DSA:3.40.50.2000 554 616 4.9E-11 T 23-04-2016 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Pfam PF13432 Tetratricopeptide repeat 240 293 0.0012 T 23-04-2016 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SUPERFAMILY SSF48452 31 291 6.07E-44 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 SUPERFAMILY SSF48452 278 357 1.71E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 555 586 1.2E-4 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS00745 39244a6236c3cd29aa9b76f7ed7e3a5f 640 Pfam PF13181 Tetratricopeptide repeat 127 155 0.0072 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05720 e488dd6550fb361060bd6f368a1885b7 166 Gene3D G3DSA:3.40.50.2300 33 156 7.0E-20 T 23-04-2016 MSIP34_RS05720 e488dd6550fb361060bd6f368a1885b7 166 Pfam PF00072 Response regulator receiver domain 40 153 3.5E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05720 e488dd6550fb361060bd6f368a1885b7 166 SMART SM00448 38 154 1.1E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05720 e488dd6550fb361060bd6f368a1885b7 166 PANTHER PTHR26402 38 156 1.3E-17 T 23-04-2016 MSIP34_RS05720 e488dd6550fb361060bd6f368a1885b7 166 SUPERFAMILY SSF52172 38 161 2.7E-21 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS02365 fa396d5c21bf1f82fc90eee53f14d48b 251 Pfam PF03799 Cell division protein FtsQ 110 220 8.6E-24 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB MSIP34_RS02365 fa396d5c21bf1f82fc90eee53f14d48b 251 PANTHER PTHR35851 2 245 1.9E-48 T 23-04-2016 MSIP34_RS02365 fa396d5c21bf1f82fc90eee53f14d48b 251 PANTHER PTHR35851:SF1 2 245 1.9E-48 T 23-04-2016 MSIP34_RS02365 fa396d5c21bf1f82fc90eee53f14d48b 251 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 228 23.015 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 MSIP34_RS02365 fa396d5c21bf1f82fc90eee53f14d48b 251 Pfam PF08478 POTRA domain, FtsQ-type 37 106 4.2E-20 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 244 4.5E-30 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 PANTHER PTHR30367 10 289 5.0E-121 T 23-04-2016 MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 Gene3D G3DSA:2.40.50.100 154 188 1.7E-18 T 23-04-2016 MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 Gene3D G3DSA:2.40.50.100 47 80 1.7E-18 T 23-04-2016 MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 244 1.9E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 PANTHER PTHR30367:SF5 10 289 5.0E-121 T 23-04-2016 MSIP34_RS05525 2e1476ee758ad017c4cec55795cb82cf 314 SUPERFAMILY SSF111369 44 190 1.57E-21 T 23-04-2016 MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 Gene3D G3DSA:3.40.50.150 182 274 9.8E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 Gene3D G3DSA:3.40.50.150 22 141 9.8E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 PANTHER PTHR10629:SF32 177 288 1.9E-30 T 23-04-2016 MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 PANTHER PTHR10629:SF32 22 140 1.9E-30 T 23-04-2016 MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 Gene3D G3DSA:3.90.120.10 535 584 2.5E-4 T 23-04-2016 MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 Pfam PF00145 C-5 cytosine-specific DNA methylase 22 139 1.2E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 Pfam PF00145 C-5 cytosine-specific DNA methylase 182 596 4.8E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 PANTHER PTHR10629 177 288 1.9E-30 T 23-04-2016 MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 PANTHER PTHR10629 22 140 1.9E-30 T 23-04-2016 MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 SUPERFAMILY SSF53335 185 270 4.65E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 SUPERFAMILY SSF53335 300 330 4.65E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 SUPERFAMILY SSF53335 22 142 4.65E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08440 0dfb079c8a08b116d73af48d075fec92 606 SUPERFAMILY SSF53335 497 594 4.65E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 PANTHER PTHR10516:SF316 1 82 8.0E-23 T 23-04-2016 MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 PANTHER PTHR10516:SF316 128 159 8.0E-23 T 23-04-2016 MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 PANTHER PTHR10516 1 82 8.0E-23 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 PANTHER PTHR10516 128 159 8.0E-23 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 SUPERFAMILY SSF54534 2 139 6.09E-30 T 23-04-2016 MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 Gene3D G3DSA:3.10.50.40 4 68 3.3E-9 T 23-04-2016 MSIP34_RS09140 1b643f88aa9a210e2768dc293a0dd622 159 Gene3D G3DSA:3.10.50.40 121 138 3.3E-9 T 23-04-2016 MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 PANTHER PTHR33121 36 292 1.9E-37 T 23-04-2016 MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 PANTHER PTHR33121:SF10 36 292 1.9E-37 T 23-04-2016 MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 SUPERFAMILY SSF103190 317 414 1.26E-11 T 23-04-2016 IPR029151 Periplasmic sensor domain-like MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 Pfam PF00563 EAL domain 29 253 9.2E-46 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 Gene3D G3DSA:3.20.20.450 31 255 8.6E-49 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 SUPERFAMILY SSF141868 31 256 8.37E-56 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 SMART SM00052 1 258 1.3E-23 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11670 f686bbe88e2fa98d87200e8caadfec05 417 Gene3D G3DSA:3.30.450.20 319 414 4.8E-11 T 23-04-2016 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 SUPERFAMILY SSF51569 2 299 1.36E-90 T 23-04-2016 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 SUPERFAMILY SSF51230 539 613 4.45E-21 T 23-04-2016 IPR011053 Single hybrid motif MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 Gene3D G3DSA:3.20.20.70 2 282 1.6E-113 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 6 610 7.2E-250 T 23-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 Pfam PF00364 Biotin-requiring enzyme 548 613 3.6E-18 T 23-04-2016 IPR000089 Biotin/lipoyl attachment MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 PANTHER PTHR18866 1 614 1.2E-224 T 23-04-2016 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 PANTHER PTHR18866:SF109 1 614 1.2E-224 T 23-04-2016 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 Pfam PF02436 Conserved carboxylase domain 291 480 1.1E-56 T 23-04-2016 IPR003379 Carboxylase, conserved domain MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 570 587 - T 23-04-2016 IPR001882 Biotin-binding site MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 SUPERFAMILY SSF89000 296 446 2.0E-50 T 23-04-2016 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 Pfam PF00682 HMGL-like 3 269 6.5E-48 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 MSIP34_RS07080 14a6ae94b7265b531fcb404b1e7d6bde 616 Gene3D G3DSA:2.40.50.100 544 614 3.3E-24 T 23-04-2016 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 PANTHER PTHR38786 2 148 4.7E-28 T 23-04-2016 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 PRINTS PR01004 Flagellar FliJ protein signature 5 27 1.4E-10 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 PRINTS PR01004 Flagellar FliJ protein signature 64 85 1.4E-10 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 PRINTS PR01004 Flagellar FliJ protein signature 127 147 1.4E-10 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 PRINTS PR01004 Flagellar FliJ protein signature 45 62 1.4E-10 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 Pfam PF02050 Flagellar FliJ protein 20 142 4.0E-32 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 10 142 3.2E-26 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 MSIP34_RS03885 fa93480c2717a3e4b82b0cb6a8ed27c3 149 PIRSF PIRSF019404 1 148 1.7E-42 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 PANTHER PTHR32305:SF9 111 606 9.0E-133 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 PANTHER PTHR32305:SF9 43 92 9.0E-133 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 592 695 2.4E-31 T 23-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 SUPERFAMILY SSF69279 35 224 2.04E-50 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 PANTHER PTHR32305 111 606 9.0E-133 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 PANTHER PTHR32305 43 92 9.0E-133 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 SUPERFAMILY SSF69279 237 392 6.46E-31 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 SUPERFAMILY SSF69279 439 458 6.46E-31 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 Gene3D G3DSA:3.55.50.10 138 228 7.7E-34 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 SUPERFAMILY SSF69349 547 617 1.49E-9 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 PANTHER PTHR32305 825 841 9.0E-133 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 732 878 6.0E-49 T 23-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 Pfam PF05954 Phage late control gene D protein (GPD) 47 389 1.7E-103 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 41 615 1.7E-108 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 SUPERFAMILY SSF69255 465 557 2.62E-31 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 PANTHER PTHR32305:SF9 825 841 9.0E-133 T 23-04-2016 MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 36 616 3.9E-124 T 23-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset MSIP34_RS06945 af11f98447ecbfa45e89d46a7444360d 887 Gene3D G3DSA:2.40.50.230 471 557 2.5E-34 T 23-04-2016 IPR006531 Gp5 N-terminal MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Gene3D G3DSA:3.40.50.300 191 288 5.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Gene3D G3DSA:3.40.50.300 9 114 5.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 274 1.4E-71 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 PANTHER PTHR11070:SF7 1 720 2.5E-217 T 23-04-2016 MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Gene3D G3DSA:1.10.10.160 118 190 7.3E-20 T 23-04-2016 IPR013986 DExx box DNA helicase domain MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 SUPERFAMILY SSF52540 8 637 1.43E-174 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 PANTHER PTHR11070 1 720 2.5E-217 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Pfam PF13361 UvrD-like helicase C-terminal domain 280 611 3.3E-72 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Gene3D G3DSA:1.10.486.10 391 536 7.5E-45 T 23-04-2016 MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Gene3D G3DSA:3.40.50.300 289 390 1.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02015 e55fb99ba0b812038c29d85e2ed36ebc 720 Gene3D G3DSA:3.40.50.300 547 637 1.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06150 3840eb0184bf3a18d8728cb179654cd4 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.342 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 MSIP34_RS06150 3840eb0184bf3a18d8728cb179654cd4 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site MSIP34_RS06150 3840eb0184bf3a18d8728cb179654cd4 301 PANTHER PTHR11048 11 300 8.8E-78 T 23-04-2016 MSIP34_RS06150 3840eb0184bf3a18d8728cb179654cd4 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 295 1.1E-91 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 MSIP34_RS06150 3840eb0184bf3a18d8728cb179654cd4 301 Pfam PF01040 UbiA prenyltransferase family 32 277 6.0E-60 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 SUPERFAMILY SSF53901 214 402 3.37E-58 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 8.9E-29 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 SUPERFAMILY SSF53901 1 250 3.52E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 Gene3D G3DSA:3.40.47.10 262 403 7.7E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 PANTHER PTHR11712 1 403 1.9E-156 T 23-04-2016 MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 SMART SM00825 Beta-ketoacyl synthase 4 400 4.2E-11 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 Gene3D G3DSA:3.40.47.10 2 256 1.1E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS04450 5ee6dcd73ffa0d68bd24c05b47451198 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 2.5E-40 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 PANTHER PTHR21085 2 352 3.4E-203 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 Pfam PF01264 Chorismate synthase 10 345 2.8E-139 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 PIRSF PIRSF001456 3 358 9.8E-138 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 36.675 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 Gene3D G3DSA:3.60.150.10 9 352 8.8E-155 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 SUPERFAMILY SSF103263 4 351 4.06E-145 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS03010 5db4f8da347e2446f93d4f75ddc6cbf7 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.5E-142 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 Gene3D G3DSA:3.20.80.10 134 288 2.4E-43 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 107 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 SUPERFAMILY SSF46689 63 123 8.96E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 Gene3D G3DSA:1.10.10.60 64 125 3.5E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 Pfam PF06445 GyrI-like small molecule binding domain 134 288 6.4E-31 T 23-04-2016 IPR029442 GyrI-like small molecule binding domain MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 Gene3D G3DSA:1.10.10.60 12 63 1.0E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 SUPERFAMILY SSF46689 12 60 2.66E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 SMART SM00342 27 111 2.9E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 PANTHER PTHR40055:SF1 30 288 7.7E-47 T 23-04-2016 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 Pfam PF12833 Helix-turn-helix domain 33 112 4.1E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 SUPERFAMILY SSF55136 134 288 2.62E-34 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 PANTHER PTHR40055 30 288 7.7E-47 T 23-04-2016 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 SMART SM00871 134 288 9.3E-38 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 80 95 2.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MSIP34_RS12490 f045b241944d95599be1519ce69c5d96 288 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 95 111 2.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 111 4.5E-21 T 23-04-2016 IPR000361 FeS cluster biogenesis MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.74 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 SUPERFAMILY SSF89360 11 105 1.96E-32 T 23-04-2016 IPR000361 FeS cluster biogenesis MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 Gene3D G3DSA:2.60.300.12 6 102 3.6E-34 T 23-04-2016 IPR000361 FeS cluster biogenesis MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 PANTHER PTHR10072 11 116 7.0E-48 T 23-04-2016 MSIP34_RS00315 31662f2b9437318a2ee41a5c9f1cacea 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 116 7.6E-40 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 MSIP34_RS04595 0855ce0eb03c9e9776129c7876373262 409 SUPERFAMILY SSF50952 37 408 3.01E-36 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 MSIP34_RS04595 0855ce0eb03c9e9776129c7876373262 409 PANTHER PTHR19328 36 409 5.1E-90 T 23-04-2016 MSIP34_RS04595 0855ce0eb03c9e9776129c7876373262 409 PANTHER PTHR19328:SF33 36 409 5.1E-90 T 23-04-2016 MSIP34_RS04595 0855ce0eb03c9e9776129c7876373262 409 Gene3D G3DSA:2.120.10.30 43 408 8.2E-70 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS04595 0855ce0eb03c9e9776129c7876373262 409 Pfam PF07995 Glucose / Sorbosone dehydrogenase 157 400 3.8E-23 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 Gene3D G3DSA:3.10.50.40 292 413 9.5E-40 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 Gene3D G3DSA:3.10.50.40 178 290 2.0E-29 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 PANTHER PTHR10657 1 438 1.5E-116 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 SUPERFAMILY SSF54534 293 392 1.96E-31 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 Pfam PF13616 PPIC-type PPIASE domain 289 390 4.9E-29 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 Pfam PF09312 SurA N-terminal domain 34 151 4.8E-42 T 23-04-2016 IPR015391 SurA N-terminal MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 Hamap MF_01183 Chaperone SurA [surA]. 12 435 35.74 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 SUPERFAMILY SSF54534 181 286 6.15E-27 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 SUPERFAMILY SSF109998 34 210 6.28E-42 T 23-04-2016 IPR027304 Trigger factor/SurA domain MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 PANTHER PTHR10657:SF16 1 438 1.5E-116 T 23-04-2016 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 Pfam PF00639 PPIC-type PPIASE domain 187 281 2.3E-18 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 MSIP34_RS02940 cc5f09af0745f98af62057a931c6a583 438 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 329 349 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site MSIP34_RS12155 feb64f423777e7358b1f01d7f139c28e 235 Gene3D G3DSA:3.40.50.880 2 229 1.2E-48 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS12155 feb64f423777e7358b1f01d7f139c28e 235 PANTHER PTHR11922 21 184 2.6E-46 T 23-04-2016 MSIP34_RS12155 feb64f423777e7358b1f01d7f139c28e 235 SUPERFAMILY SSF52317 4 189 7.55E-36 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS12155 feb64f423777e7358b1f01d7f139c28e 235 Pfam PF00117 Glutamine amidotransferase class-I 44 177 2.7E-11 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS12155 feb64f423777e7358b1f01d7f139c28e 235 PANTHER PTHR11922:SF11 21 184 2.6E-46 T 23-04-2016 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 206 1.9E-31 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 Gene3D G3DSA:3.30.950.10 115 228 7.8E-40 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 277 9.5E-87 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 PIRSF PIRSF005917 2 281 7.7E-102 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 Gene3D G3DSA:3.40.1010.10 5 114 2.2E-18 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 36.737 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 PANTHER PTHR21091:SF18 5 245 7.8E-82 T 23-04-2016 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 PANTHER PTHR21091 5 245 7.8E-82 T 23-04-2016 MSIP34_RS11625 3d9f86feb3291ed23c8046917937c91c 283 SUPERFAMILY SSF53790 4 225 6.54E-79 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 Gene3D G3DSA:1.10.760.10 223 310 1.5E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PIRSF PIRSF000006 1 312 4.7E-74 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PANTHER PTHR33751 90 305 3.5E-57 T 23-04-2016 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PANTHER PTHR33751 1 52 3.5E-57 T 23-04-2016 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 70 311 6.0E-54 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 Gene3D G3DSA:1.10.760.10 34 55 3.9E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 Gene3D G3DSA:1.10.760.10 119 222 3.9E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 SUPERFAMILY SSF46626 28 51 1.92E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 215 304 7.6E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 131 203 3.0E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 SUPERFAMILY SSF46626 211 307 1.41E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PRINTS PR00605 Class IC cytochrome C signature 181 203 3.6E-6 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PRINTS PR00605 Class IC cytochrome C signature 138 149 3.6E-6 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 SUPERFAMILY SSF46626 119 213 1.92E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PANTHER PTHR33751:SF1 90 305 3.5E-57 T 23-04-2016 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 PANTHER PTHR33751:SF1 1 52 3.5E-57 T 23-04-2016 MSIP34_RS10760 a3de4b008697de5f44ce6cecfe787ca4 312 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 10 55 1.5E-20 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 PANTHER PTHR11695 12 106 1.5E-163 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 PANTHER PTHR11695 127 264 1.5E-163 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 PANTHER PTHR11695 286 386 1.5E-163 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 PANTHER PTHR11695:SF281 12 106 1.5E-163 T 23-04-2016 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 PANTHER PTHR11695:SF281 127 264 1.5E-163 T 23-04-2016 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 PANTHER PTHR11695:SF281 286 386 1.5E-163 T 23-04-2016 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 Pfam PF00107 Zinc-binding dehydrogenase 197 283 1.0E-9 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 Gene3D G3DSA:3.90.180.10 1 188 4.4E-54 T 23-04-2016 IPR011032 GroES-like MSIP34_RS06795 963464c812f812bc592240f793574b81 387 SUPERFAMILY SSF50129 1 196 5.17E-58 T 23-04-2016 IPR011032 GroES-like MSIP34_RS06795 963464c812f812bc592240f793574b81 387 SUPERFAMILY SSF51735 164 348 3.81E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06795 963464c812f812bc592240f793574b81 387 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 5.9E-12 T 23-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated MSIP34_RS06795 963464c812f812bc592240f793574b81 387 Gene3D G3DSA:3.40.50.720 189 328 1.4E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06795 963464c812f812bc592240f793574b81 387 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 151 4.0E-29 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 MSIP34_RS06795 963464c812f812bc592240f793574b81 387 SMART SM00829 8 384 0.006 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 PANTHER PTHR30026:SF3 1 445 1.7E-99 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 SUPERFAMILY SSF56954 2 436 9.42E-91 T 23-04-2016 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 PANTHER PTHR30026 1 445 1.7E-99 T 23-04-2016 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 Pfam PF02321 Outer membrane efflux protein 28 220 1.1E-29 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 Pfam PF02321 Outer membrane efflux protein 245 431 7.6E-35 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 Gene3D G3DSA:1.20.1600.10 18 438 3.1E-84 T 23-04-2016 MSIP34_RS13185 8f6b470a8577718a801ac00e456d981e 453 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 445 1.2E-100 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 MSIP34_RS08525 3985a5192b88d7d0dbaf5f75a87eca35 234 PIRSF PIRSF015957 2 227 5.3E-49 T 23-04-2016 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase KEGG: 00680+4.2.3.153|KEGG: 00902+4.2.3.15|MetaCyc: PWY-3041|MetaCyc: PWY-5423|MetaCyc: PWY-7410 MSIP34_RS08525 3985a5192b88d7d0dbaf5f75a87eca35 234 Pfam PF04476 Putative methanogenic enzyme for methanofuran 4 216 1.1E-69 T 23-04-2016 IPR007565 (5-formylfuran-3-yl)methyl phosphate synthase KEGG: 00680+4.2.3.153|KEGG: 00902+4.2.3.15|MetaCyc: PWY-3041|MetaCyc: PWY-5423|MetaCyc: PWY-7410 MSIP34_RS08525 3985a5192b88d7d0dbaf5f75a87eca35 234 SUPERFAMILY SSF51366 18 213 4.36E-7 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS08525 3985a5192b88d7d0dbaf5f75a87eca35 234 Gene3D G3DSA:3.20.20.70 12 143 3.0E-4 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 SUPERFAMILY SSF53901 3 252 9.61E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 SUPERFAMILY SSF53901 214 409 3.65E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 PIRSF PIRSF000447 1 410 7.2E-189 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 407 1.0E-200 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.7E-62 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 SMART SM00825 Beta-ketoacyl synthase 6 410 8.1E-16 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 367 1.6E-36 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 Gene3D G3DSA:3.40.47.10 263 409 7.6E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 Gene3D G3DSA:3.40.47.10 3 257 1.1E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 MSIP34_RS07040 cc8c762b2b0b0261beb0e890abf74565 410 PANTHER PTHR11712 2 409 5.3E-220 T 23-04-2016 MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 Pfam PF08534 Redoxin 20 164 3.2E-28 T 23-04-2016 IPR013740 Redoxin GO:0016491 MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 SUPERFAMILY SSF52833 4 165 1.79E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 PANTHER PTHR10681:SF81 1 167 7.7E-52 T 23-04-2016 MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 36.921 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 PANTHER PTHR10681 1 167 7.7E-52 T 23-04-2016 MSIP34_RS08895 970f64cbdd61eec0117428d65011df28 167 Gene3D G3DSA:3.40.30.10 4 167 4.1E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11380 ba2054dae0571aeed8a5db8ef132907e 171 PANTHER PTHR10681 33 165 3.7E-25 T 23-04-2016 MSIP34_RS11380 ba2054dae0571aeed8a5db8ef132907e 171 Pfam PF00578 AhpC/TSA family 33 147 1.6E-25 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS11380 ba2054dae0571aeed8a5db8ef132907e 171 PANTHER PTHR10681:SF107 33 165 3.7E-25 T 23-04-2016 MSIP34_RS11380 ba2054dae0571aeed8a5db8ef132907e 171 SUPERFAMILY SSF52833 32 168 2.5E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11380 ba2054dae0571aeed8a5db8ef132907e 171 Gene3D G3DSA:3.40.30.10 12 168 1.5E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS04815 4c82076b21000e7fcdbbf5f63693636a 320 PANTHER PTHR30151:SF0 89 315 2.4E-58 T 23-04-2016 MSIP34_RS04815 4c82076b21000e7fcdbbf5f63693636a 320 SUPERFAMILY SSF161098 119 301 4.06E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04815 4c82076b21000e7fcdbbf5f63693636a 320 Gene3D G3DSA:1.10.3720.10 120 310 4.6E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04815 4c82076b21000e7fcdbbf5f63693636a 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 309 5.6E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04815 4c82076b21000e7fcdbbf5f63693636a 320 PANTHER PTHR30151 89 315 2.4E-58 T 23-04-2016 MSIP34_RS09220 7a7ec3fa3fb52b1cadffb92d08fe1ca0 393 PANTHER PTHR10859 29 391 2.7E-66 T 23-04-2016 MSIP34_RS09220 7a7ec3fa3fb52b1cadffb92d08fe1ca0 393 PANTHER PTHR10859:SF96 29 391 2.7E-66 T 23-04-2016 MSIP34_RS09220 7a7ec3fa3fb52b1cadffb92d08fe1ca0 393 Pfam PF13641 Glycosyltransferase like family 2 44 265 2.9E-22 T 23-04-2016 MSIP34_RS09220 7a7ec3fa3fb52b1cadffb92d08fe1ca0 393 Gene3D G3DSA:3.90.550.10 44 275 9.2E-16 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09220 7a7ec3fa3fb52b1cadffb92d08fe1ca0 393 SUPERFAMILY SSF53448 40 281 5.3E-30 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 Pfam PF00361 Proton-conducting membrane transporter 128 420 4.0E-77 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 PANTHER PTHR22773 1 474 2.5E-162 T 23-04-2016 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 471 18.614 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 470 2.3E-145 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 PANTHER PTHR22773:SF41 1 474 2.5E-162 T 23-04-2016 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 6.6E-7 T 23-04-2016 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 414 433 6.6E-7 T 23-04-2016 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 6.6E-7 T 23-04-2016 MSIP34_RS03495 a026ff792c4887985afef892a8663524 483 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 6.6E-7 T 23-04-2016 MSIP34_RS01370 f3c9fe8185669446e53fca06942ce26b 106 Pfam PF00462 Glutaredoxin 17 82 5.7E-17 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 MSIP34_RS01370 f3c9fe8185669446e53fca06942ce26b 106 PANTHER PTHR10293 2 104 2.5E-58 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related MSIP34_RS01370 f3c9fe8185669446e53fca06942ce26b 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 102 8.6E-45 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related MSIP34_RS01370 f3c9fe8185669446e53fca06942ce26b 106 Gene3D G3DSA:3.40.30.10 8 103 7.2E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01370 f3c9fe8185669446e53fca06942ce26b 106 PIRSF PIRSF005894 1 106 2.1E-47 T 23-04-2016 IPR014434 Monothiol glutaredoxin MSIP34_RS01370 f3c9fe8185669446e53fca06942ce26b 106 SUPERFAMILY SSF52833 2 104 2.53E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 SUPERFAMILY SSF90123 12 289 1.31E-28 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 PANTHER PTHR24221:SF161 1 542 6.1E-66 T 23-04-2016 MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 Gene3D G3DSA:3.40.50.300 324 543 9.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 PANTHER PTHR24221 1 542 6.1E-66 T 23-04-2016 MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 Pfam PF00005 ABC transporter 339 485 3.0E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 Pfam PF00664 ABC transporter transmembrane region 14 271 2.8E-8 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 SMART SM00382 348 531 1.2E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 SUPERFAMILY SSF52540 309 543 1.24E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10020 d65d4f6543297bc590157008537c5274 549 Gene3D G3DSA:1.20.1560.10 11 286 2.1E-25 T 23-04-2016 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 PANTHER PTHR32039:SF8 75 369 8.8E-109 T 23-04-2016 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 Pfam PF02481 DNA recombination-mediator protein A 79 283 2.7E-80 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 SUPERFAMILY SSF102405 86 292 5.76E-45 T 23-04-2016 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 PANTHER PTHR32039 75 369 8.8E-109 T 23-04-2016 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 SUPERFAMILY SSF47781 10 62 1.84E-6 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 291 3.2E-84 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 Gene3D G3DSA:3.40.50.450 121 262 4.1E-14 T 23-04-2016 MSIP34_RS00965 0316f02f2d08a74d3a170f5f98962004 371 Gene3D G3DSA:1.10.150.20 16 62 2.4E-7 T 23-04-2016 MSIP34_RS00960 0b4d30e66072ee91e90a6185fabd8ee3 152 PANTHER PTHR38692:SF1 1 152 1.2E-33 T 23-04-2016 MSIP34_RS00960 0b4d30e66072ee91e90a6185fabd8ee3 152 Hamap MF_00598 Protein Smg [smg]. 1 152 24.399 T 23-04-2016 IPR007456 Smg MSIP34_RS00960 0b4d30e66072ee91e90a6185fabd8ee3 152 Pfam PF04361 Protein of unknown function (DUF494) 1 152 1.5E-52 T 23-04-2016 IPR007456 Smg MSIP34_RS00960 0b4d30e66072ee91e90a6185fabd8ee3 152 PANTHER PTHR38692 1 152 1.2E-33 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:2.40.50.180 677 741 1.0E-9 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 408 469 1.6E-17 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SUPERFAMILY SSF55052 262 325 1.07E-9 T 23-04-2016 IPR015162 CheY binding MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SMART SM01231 406 469 8.4E-22 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SUPERFAMILY SSF47226 4 129 3.4E-33 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SUPERFAMILY SSF55874 472 652 2.23E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SMART SM00073 5 102 5.7E-29 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:1.10.287.560 407 470 1.7E-22 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:1.20.120.160 2 144 1.0E-38 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PANTHER PTHR22617 1 148 5.5E-261 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PANTHER PTHR22617 218 799 5.5E-261 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:3.30.70.400 175 240 3.7E-12 T 23-04-2016 IPR015162 CheY binding MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:3.30.70.400 259 325 1.2E-6 T 23-04-2016 IPR015162 CheY binding MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Pfam PF01627 Hpt domain 8 94 2.0E-20 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SUPERFAMILY SSF55052 176 240 5.49E-13 T 23-04-2016 IPR015162 CheY binding MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:3.30.565.10 471 653 9.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SUPERFAMILY SSF47384 407 470 2.75E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 517 653 5.9E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SMART SM00387 514 654 9.2E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Pfam PF01584 CheW-like domain 659 787 7.5E-25 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 598 608 3.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 3.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 573 3.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 632 3.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SMART SM00260 646 786 6.4E-39 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PANTHER PTHR22617:SF20 1 148 5.5E-261 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 PANTHER PTHR22617:SF20 218 799 5.5E-261 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:2.30.30.40 654 675 2.7E-24 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Gene3D G3DSA:2.30.30.40 742 786 2.7E-24 T 23-04-2016 MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Pfam PF09078 CheY binding 263 324 1.5E-16 T 23-04-2016 IPR015162 CheY binding MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 Pfam PF09078 CheY binding 178 239 6.3E-20 T 23-04-2016 IPR015162 CheY binding MSIP34_RS04140 465e3652d86c65ff2a8f16a0b39d2a3b 799 SUPERFAMILY SSF50341 653 786 6.67E-31 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13940 8cf132bd86af0e11c01174e99b01dfc5 259 Hamap MF_00443 Thiazole synthase [thiG]. 3 259 42.609 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 MSIP34_RS13940 8cf132bd86af0e11c01174e99b01dfc5 259 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 253 8.2E-108 T 23-04-2016 MSIP34_RS13940 8cf132bd86af0e11c01174e99b01dfc5 259 PANTHER PTHR34266 1 258 2.3E-145 T 23-04-2016 MSIP34_RS13940 8cf132bd86af0e11c01174e99b01dfc5 259 SUPERFAMILY SSF110399 2 244 3.79E-89 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 MSIP34_RS13940 8cf132bd86af0e11c01174e99b01dfc5 259 Gene3D G3DSA:3.20.20.70 12 233 1.4E-51 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.8E-21 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 PANTHER PTHR10916:SF0 1 64 5.9E-21 T 23-04-2016 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 Gene3D G3DSA:1.10.287.310 1 61 2.3E-23 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 SUPERFAMILY SSF46561 1 61 2.49E-20 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 Pfam PF00831 Ribosomal L29 protein 4 60 1.4E-21 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 PANTHER PTHR10916 1 64 5.9E-21 T 23-04-2016 MSIP34_RS01620 1bca69571d4034457020e273a6542fce 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.296 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS05090 66ceb5a8355d19f5666e721c6cafdc0c 281 SUPERFAMILY SSF53335 9 279 5.92E-95 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05090 66ceb5a8355d19f5666e721c6cafdc0c 281 PANTHER PTHR37426 2 281 6.5E-113 T 23-04-2016 MSIP34_RS05090 66ceb5a8355d19f5666e721c6cafdc0c 281 Gene3D G3DSA:3.40.50.150 1 279 4.3E-119 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05090 66ceb5a8355d19f5666e721c6cafdc0c 281 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 268 41.476 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 MSIP34_RS05090 66ceb5a8355d19f5666e721c6cafdc0c 281 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 277 1.7E-81 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 MSIP34_RS05090 66ceb5a8355d19f5666e721c6cafdc0c 281 PANTHER PTHR37426:SF1 2 281 6.5E-113 T 23-04-2016 MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 PANTHER PTHR10799 151 387 5.4E-28 T 23-04-2016 MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 SMART SM00267 215 387 1.1E-64 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 Gene3D G3DSA:3.30.70.270 228 388 4.1E-51 T 23-04-2016 MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 383 3.3E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 PANTHER PTHR10799:SF750 151 387 5.4E-28 T 23-04-2016 MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 384 8.8E-51 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05435 8c556272a482a3ed094fe15c7ac4ae35 398 SUPERFAMILY SSF55073 231 388 1.65E-45 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13060 48132d20f4b25db0e40d24a24258d4d4 305 PANTHER PTHR34308:SF1 47 302 2.1E-31 T 23-04-2016 MSIP34_RS13060 48132d20f4b25db0e40d24a24258d4d4 305 PANTHER PTHR34308 47 302 2.1E-31 T 23-04-2016 MSIP34_RS13060 48132d20f4b25db0e40d24a24258d4d4 305 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 305 56.035 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 MSIP34_RS13060 48132d20f4b25db0e40d24a24258d4d4 305 Pfam PF03186 CobD/Cbib protein 31 282 1.7E-27 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 PANTHER PTHR11730:SF17 38 461 2.3E-187 T 23-04-2016 MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 Gene3D G3DSA:1.10.3430.10 62 444 9.5E-136 T 23-04-2016 IPR029020 Ammonium/urea transporter MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 TIGRFAM TIGR00836 amt: ammonium transporter 66 460 5.6E-132 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 PANTHER PTHR11730 38 461 2.3E-187 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 SUPERFAMILY SSF111352 63 444 1.03E-126 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 ProSitePatterns PS01219 Ammonium transporters signature. 227 252 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 MSIP34_RS02540 6654e1fd0a5c0e4c03dafbbc1524e6d3 463 Pfam PF00909 Ammonium Transporter Family 68 460 1.9E-115 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 Pfam PF01938 TRAM domain 373 433 1.0E-4 T 23-04-2016 IPR002792 TRAM domain MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 Pfam PF04055 Radical SAM superfamily 143 320 1.0E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 SMART SM00729 137 362 4.9E-51 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 PANTHER PTHR11918 6 435 3.5E-222 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 PANTHER PTHR11918:SF57 6 435 3.5E-222 T 23-04-2016 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 141 161 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 SUPERFAMILY SSF102114 116 367 1.57E-49 T 23-04-2016 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 7 435 4.1E-173 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 437 59.789 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 Gene3D G3DSA:2.40.50.140 379 436 1.8E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 7 435 8.1E-100 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 Gene3D G3DSA:3.80.30.20 135 374 2.1E-70 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe MSIP34_RS08620 c501768b898fa3190269892a7c93ffdc 441 Pfam PF00919 Uncharacterized protein family UPF0004 7 90 1.3E-18 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 SUPERFAMILY SSF51735 1 257 6.08E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 Gene3D G3DSA:3.40.50.720 7 241 4.4E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 Pfam PF00106 short chain dehydrogenase 8 196 3.3E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PIRSF PIRSF000126 2 261 1.9E-52 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PANTHER PTHR24322 154 185 3.1E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PANTHER PTHR24322 10 138 3.1E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PANTHER PTHR24322:SF57 154 185 3.1E-45 T 23-04-2016 MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PANTHER PTHR24322:SF57 10 138 3.1E-45 T 23-04-2016 MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 1.3E-4 T 23-04-2016 MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13140 0ebb5ba5b0fc9bf05eea3ffec7099ce3 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.8E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Gene3D G3DSA:2.20.28.20 145 176 1.8E-19 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 530 8.2E-173 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 40.031 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 SUPERFAMILY SSF47323 386 589 8.97E-40 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Gene3D G3DSA:2.40.50.140 570 678 1.9E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 678 6.5E-40 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Gene3D G3DSA:1.10.730.10 380 535 3.1E-43 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Pfam PF09334 tRNA synthetases class I (M) 8 396 1.2E-154 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Pfam PF01588 Putative tRNA binding domain 582 675 1.7E-23 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 SUPERFAMILY SSF57770 142 176 1.02E-12 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PANTHER PTHR11946 6 633 9.2E-232 T 23-04-2016 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Gene3D G3DSA:3.40.50.620 183 379 5.7E-89 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 Gene3D G3DSA:3.40.50.620 6 144 5.7E-89 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 SUPERFAMILY SSF50249 571 677 8.57E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 SUPERFAMILY SSF52374 176 387 1.06E-101 T 23-04-2016 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 SUPERFAMILY SSF52374 6 141 1.06E-101 T 23-04-2016 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PANTHER PTHR11946:SF86 6 633 9.2E-232 T 23-04-2016 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.3E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 1.3E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.3E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 1.3E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.3E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS05605 1ad75bb6d6d1fa0dd056ffc37fa37438 678 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.3E-23 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 MSIP34_RS06765 d2a49bbb17664de94f00181eef96c585 205 PANTHER PTHR11562 12 201 7.8E-15 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MSIP34_RS06765 d2a49bbb17664de94f00181eef96c585 205 Pfam PF01545 Cation efflux family 23 195 1.9E-16 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MSIP34_RS06765 d2a49bbb17664de94f00181eef96c585 205 Gene3D G3DSA:1.20.1510.10 20 201 1.0E-25 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain MSIP34_RS06765 d2a49bbb17664de94f00181eef96c585 205 SUPERFAMILY SSF161111 18 201 6.67E-34 T 23-04-2016 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 SUPERFAMILY SSF46785 2 81 1.5E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 Pfam PF00155 Aminotransferase class I and II 168 460 3.4E-28 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 SMART SM00345 7 66 1.8E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 SUPERFAMILY SSF53383 97 468 1.77E-90 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 Gene3D G3DSA:3.40.640.10 146 348 2.3E-68 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 PANTHER PTHR11751 86 468 1.2E-162 T 23-04-2016 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 Gene3D G3DSA:3.90.1150.10 349 469 1.1E-5 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 PANTHER PTHR11751:SF314 86 468 1.2E-162 T 23-04-2016 MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 Gene3D G3DSA:1.10.10.10 1 67 3.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02095 4fbdb7f2fee94a530b59dae9b0b5850b 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.0E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PANTHER PTHR10025 1 278 1.8E-154 T 23-04-2016 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 SUPERFAMILY SSF51735 123 279 2.58E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 6.2E-67 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.212 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 2.5E-37 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 SUPERFAMILY SSF53223 1 122 5.56E-38 T 23-04-2016 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 Gene3D G3DSA:3.40.192.10 7 139 4.2E-47 T 23-04-2016 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 Gene3D G3DSA:3.40.50.720 140 264 2.9E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS00405 990a11ac47c1f03de780f9b39412ffcd 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.9E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 MSIP34_RS01585 451983ac9bf81d5bec3a12429b6e2ada 208 Gene3D G3DSA:3.40.1370.10 58 208 2.9E-51 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01585 451983ac9bf81d5bec3a12429b6e2ada 208 SUPERFAMILY SSF52166 1 207 1.83E-65 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01585 451983ac9bf81d5bec3a12429b6e2ada 208 Pfam PF00573 Ribosomal protein L4/L1 family 17 205 3.4E-58 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01585 451983ac9bf81d5bec3a12429b6e2ada 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 208 30.242 T 23-04-2016 IPR013005 50S ribosomal protein uL4 MSIP34_RS01585 451983ac9bf81d5bec3a12429b6e2ada 208 PANTHER PTHR10746 17 207 2.9E-66 T 23-04-2016 IPR013005 50S ribosomal protein uL4 MSIP34_RS01585 451983ac9bf81d5bec3a12429b6e2ada 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 205 3.9E-65 T 23-04-2016 IPR013005 50S ribosomal protein uL4 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 Gene3D G3DSA:3.40.50.150 230 426 1.2E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 426 1.1E-107 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 SUPERFAMILY SSF53335 137 426 2.71E-67 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 Gene3D G3DSA:3.30.70.1170 172 227 3.3E-19 T 23-04-2016 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PANTHER PTHR22807:SF30 25 426 5.6E-90 T 23-04-2016 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 Gene3D G3DSA:1.10.940.10 4 147 1.8E-33 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 Pfam PF01029 NusB family 4 124 1.1E-15 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PANTHER PTHR22807 25 426 5.6E-90 T 23-04-2016 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 425 3.5E-53 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.1E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 409 426 2.1E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 313 325 2.1E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 363 379 2.1E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.1E-24 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 Gene3D G3DSA:1.10.287.730 148 171 1.8E-5 T 23-04-2016 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 312 323 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS00990 342d07567824c49ec863887b862dbd8b 427 SUPERFAMILY SSF48013 5 148 1.8E-25 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 SUPERFAMILY SSF51161 7 210 5.41E-39 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 Gene3D G3DSA:2.160.10.10 94 211 6.1E-29 T 23-04-2016 MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 PANTHER PTHR23416 113 210 1.6E-16 T 23-04-2016 MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 161 196 9.3E-8 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 126 160 3.7E-7 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 Gene3D G3DSA:3.40.50.20 7 87 1.2E-7 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS13975 948c3437ba5a32db8907cf710b82791a 217 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 8 210 3.5E-50 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like MSIP34_RS00920 3ba086bdcd79cbb3870ade6461ae9048 225 Pfam PF04340 Protein of unknown function, DUF484 4 221 6.1E-40 T 23-04-2016 IPR007435 Protein of unknown function DUF484 MSIP34_RS00920 3ba086bdcd79cbb3870ade6461ae9048 225 PANTHER PTHR38765 1 220 3.5E-37 T 23-04-2016 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 SMART SM00448 15 124 3.1E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Pfam PF00158 Sigma-54 interaction domain 160 325 4.3E-62 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 451 2.8E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 451 471 2.8E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 PANTHER PTHR32071 1 470 6.0E-164 T 23-04-2016 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Gene3D G3DSA:1.10.10.60 417 470 5.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Pfam PF00072 Response regulator receiver domain 17 124 4.5E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 SUPERFAMILY SSF52540 153 400 1.73E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 372 381 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 SUPERFAMILY SSF46689 372 470 9.86E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 SUPERFAMILY SSF52172 13 202 1.22E-40 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 183 196 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Gene3D G3DSA:1.10.8.60 332 401 6.9E-22 T 23-04-2016 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 SMART SM00382 179 323 8.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Gene3D G3DSA:3.40.50.2300 14 139 4.3E-33 T 23-04-2016 MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Gene3D G3DSA:3.40.50.300 151 331 1.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08825 6bc385b0fe21322b7e811ceb5497b99b 472 Pfam PF02954 Bacterial regulatory protein, Fis family 428 468 1.6E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 Gene3D G3DSA:3.20.20.70 5 333 6.6E-151 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 331 7.5E-141 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PIRSF PIRSF001415 1 334 4.1E-151 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 197 216 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 159 178 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 306 325 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 128 142 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 251 267 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 276 291 1.2E-57 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 251 263 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 PANTHER PTHR11458 8 334 2.0E-182 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 SMART SM01004 8 332 1.0E-241 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS12620 1143bf0da383829e1c00b396c12aab18 334 SUPERFAMILY SSF51569 7 333 7.62E-145 T 23-04-2016 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 SMART SM00382 58 229 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.2E-173 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PANTHER PTHR22942 3 336 2.3E-206 T 23-04-2016 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PRINTS PR00142 RecA protein signature 94 123 3.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PRINTS PR00142 RecA protein signature 128 157 3.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PRINTS PR00142 RecA protein signature 298 315 3.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PRINTS PR00142 RecA protein signature 211 239 3.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PRINTS PR00142 RecA protein signature 166 195 3.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PRINTS PR00142 RecA protein signature 244 273 3.2E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 SUPERFAMILY SSF52540 4 268 3.18E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 SUPERFAMILY SSF54752 269 325 5.89E-21 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 PANTHER PTHR22942:SF1 3 336 2.3E-206 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 ProSitePatterns PS00321 recA signature. 214 222 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 Pfam PF00154 recA bacterial DNA recombination protein 7 269 1.1E-147 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 Gene3D G3DSA:3.40.50.300 35 268 2.7E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 Hamap MF_00268 Protein RecA [recA]. 5 330 51.839 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 MSIP34_RS11010 95b6cefd91ac9a63cb2e2be6003c1822 344 Gene3D G3DSA:3.30.250.10 269 326 3.4E-28 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 Pfam PF02569 Pantoate-beta-alanine ligase 4 272 2.0E-102 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 19 81 1.4E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 Gene3D G3DSA:3.30.1300.10 171 277 9.5E-32 T 23-04-2016 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 PANTHER PTHR21299 1 277 5.4E-124 T 23-04-2016 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 SUPERFAMILY SSF52374 2 274 2.71E-105 T 23-04-2016 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 Hamap MF_00158 Pantothenate synthetase [panC]. 2 274 40.228 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 272 6.9E-100 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 PANTHER PTHR21299:SF1 1 277 5.4E-124 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 MSIP34_RS10895 fe12d8256067b705cf2e46ea17a7fb8e 280 Gene3D G3DSA:3.40.50.620 2 168 5.8E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 PANTHER PTHR24421 1 352 1.2E-199 T 23-04-2016 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 Pfam PF00072 Response regulator receiver domain 6 108 5.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 Gene3D G3DSA:3.40.50.2300 2 132 2.4E-30 T 23-04-2016 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 Gene3D G3DSA:3.40.50.180 167 355 2.0E-79 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 SUPERFAMILY SSF52738 169 355 3.53E-69 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 PANTHER PTHR24421:SF4 1 352 1.2E-199 T 23-04-2016 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 SMART SM00448 4 127 4.2E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 SUPERFAMILY SSF52172 1 108 4.7E-28 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 PIRSF PIRSF000876 1 360 3.1E-134 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 357 39.952 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS13550 e0cd741b72782324546d77e788279914 360 Pfam PF01339 CheB methylesterase 174 352 5.7E-59 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 SMART SM00448 2 115 6.2E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 SUPERFAMILY SSF46894 137 209 4.42E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 SUPERFAMILY SSF52172 1 134 8.97E-35 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 7.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 7.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 7.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 Gene3D G3DSA:1.10.10.10 120 209 3.8E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 SMART SM00421 146 203 6.6E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 PANTHER PTHR26402:SF151 2 210 5.6E-65 T 23-04-2016 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 Pfam PF00072 Response regulator receiver domain 4 116 2.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 PANTHER PTHR26402 2 210 5.6E-65 T 23-04-2016 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 Gene3D G3DSA:3.40.50.2300 1 119 2.4E-35 T 23-04-2016 MSIP34_RS05725 8a7cabfbc56bbc3fad4f559d91f24b73 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.4E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 SMART SM00387 314 423 1.7E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 SMART SM00388 215 276 3.4E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 SUPERFAMILY SSF158472 163 211 3.4E-5 T 23-04-2016 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 4.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 4.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 Gene3D G3DSA:3.30.565.10 263 423 8.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 272 2.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 Pfam PF00672 HAMP domain 144 210 3.8E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 Gene3D G3DSA:1.10.287.130 205 262 1.5E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 SUPERFAMILY SSF55874 266 421 5.24E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 SUPERFAMILY SSF47384 199 272 5.49E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 28 133 3.7E-33 T 23-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 420 7.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 SMART SM00304 162 214 3.9E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS10630 05d9ca24b25de57c73bfee664a31b2ed 427 PANTHER PTHR24423 156 421 3.9E-51 T 23-04-2016 MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 PIRSF PIRSF002211 1 65 9.7E-25 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 Gene3D G3DSA:3.30.1390.20 9 64 4.6E-26 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 4 65 19.921 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 SUPERFAMILY SSF55129 9 64 1.7E-18 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 11 64 1.8E-20 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 Pfam PF00327 Ribosomal protein L30p/L7e 11 60 6.4E-16 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain MSIP34_RS01670 401d64ab206ba3997661558fb0163b9a 65 PANTHER PTHR15892 4 64 1.1E-21 T 23-04-2016 MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 SUPERFAMILY SSF56235 2 38 3.16E-46 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 SUPERFAMILY SSF56235 110 296 3.16E-46 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 PANTHER PTHR11907 1 52 5.6E-32 T 23-04-2016 MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 PANTHER PTHR11907 113 270 5.6E-32 T 23-04-2016 MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 PANTHER PTHR11907:SF0 1 52 5.6E-32 T 23-04-2016 MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 PANTHER PTHR11907:SF0 113 270 5.6E-32 T 23-04-2016 MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 Pfam PF13522 Glutamine amidotransferase domain 139 270 5.5E-20 T 23-04-2016 MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 Gene3D G3DSA:3.60.20.10 2 44 9.8E-55 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS12185 d572f904d624c554bed40736c841cc81 298 Gene3D G3DSA:3.60.20.10 116 297 9.8E-55 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS10900 2c603cf45134f8f8170211d50328899b 342 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 111 126 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 MSIP34_RS10900 2c603cf45134f8f8170211d50328899b 342 SUPERFAMILY SSF53474 70 311 7.11E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS10900 2c603cf45134f8f8170211d50328899b 342 PANTHER PTHR23024 81 335 1.7E-22 T 23-04-2016 MSIP34_RS10900 2c603cf45134f8f8170211d50328899b 342 Gene3D G3DSA:3.40.50.1820 73 321 5.2E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS10900 2c603cf45134f8f8170211d50328899b 342 Pfam PF07859 alpha/beta hydrolase fold 111 301 3.7E-14 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 MSIP34_RS06525 d7f1c86f5f56debd27f53188317dba25 272 Gene3D G3DSA:3.20.20.370 5 261 2.6E-55 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 MSIP34_RS06525 d7f1c86f5f56debd27f53188317dba25 272 PANTHER PTHR31609 1 261 2.1E-27 T 23-04-2016 MSIP34_RS06525 d7f1c86f5f56debd27f53188317dba25 272 SUPERFAMILY SSF88713 3 262 4.22E-53 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MSIP34_RS06525 d7f1c86f5f56debd27f53188317dba25 272 Pfam PF04794 YdjC-like protein 5 257 8.9E-50 T 23-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 SUPERFAMILY SSF56322 18 486 3.27E-161 T 23-04-2016 IPR005801 ADC synthase GO:0009058 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 30 485 2.3E-170 T 23-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 Pfam PF00425 chorismate binding enzyme 224 477 1.4E-98 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 PRINTS PR00095 Anthranilate synthase component I signature 419 433 2.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 PRINTS PR00095 Anthranilate synthase component I signature 339 352 2.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 PRINTS PR00095 Anthranilate synthase component I signature 434 448 2.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 PRINTS PR00095 Anthranilate synthase component I signature 325 338 2.2E-23 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 PANTHER PTHR11236:SF9 9 488 8.5E-225 T 23-04-2016 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 PANTHER PTHR11236 9 488 8.5E-225 T 23-04-2016 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 Pfam PF04715 Anthranilate synthase component I, N terminal region 30 174 6.6E-30 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS12645 1f9b628b0a22fd4fef36e3b9e016cf29 504 Gene3D G3DSA:3.60.120.10 16 486 3.8E-178 T 23-04-2016 IPR005801 ADC synthase GO:0009058 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 37 51 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 PANTHER PTHR21600:SF23 1 103 1.2E-77 T 23-04-2016 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 PANTHER PTHR21600:SF23 121 176 1.2E-77 T 23-04-2016 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 Pfam PF00849 RNA pseudouridylate synthase 2 146 6.0E-14 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 SUPERFAMILY SSF55120 2 175 6.4E-41 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 PANTHER PTHR21600 1 103 1.2E-77 T 23-04-2016 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 PANTHER PTHR21600 121 176 1.2E-77 T 23-04-2016 MSIP34_RS03000 cea52fdb41ff18382e9aabeddca97992 178 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 176 8.1E-54 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 PANTHER PTHR20852 2 444 4.5E-140 T 23-04-2016 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 SUPERFAMILY SSF55931 100 441 2.26E-111 T 23-04-2016 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 Gene3D G3DSA:3.30.590.10 103 432 1.4E-106 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 8 441 1.2E-195 T 23-04-2016 IPR017536 Glutamine synthetase, type III GO:0004356|GO:0006542 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 PANTHER PTHR20852:SF7 2 444 4.5E-140 T 23-04-2016 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 Pfam PF00120 Glutamine synthetase, catalytic domain 101 440 9.8E-110 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 SUPERFAMILY SSF54368 4 99 3.01E-23 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 Gene3D G3DSA:3.10.20.70 5 102 2.4E-20 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 SMART SM01230 100 354 4.3E-115 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS12190 932a0037da73680a5acca53a1e39a5ee 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 231 246 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 PANTHER PTHR22993:SF15 1 272 1.4E-115 T 23-04-2016 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.3E-31 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 2.1E-26 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 8.8E-90 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 SMART SM01232 130 222 2.7E-47 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 SUPERFAMILY SSF81624 2 135 6.28E-37 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 SMART SM00898 2 115 9.4E-48 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 Pfam PF06827 Zinc finger found in FPG and IleRS 242 270 4.6E-11 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 41.353 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 SUPERFAMILY SSF46946 131 222 1.24E-28 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 SUPERFAMILY SSF57716 218 270 4.28E-17 T 23-04-2016 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 Gene3D G3DSA:3.20.190.10 2 130 2.6E-33 T 23-04-2016 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 PANTHER PTHR22993 1 272 1.4E-115 T 23-04-2016 MSIP34_RS10110 dc432746c1a2809b6e10cc2fed3ac698 272 Gene3D G3DSA:1.10.8.50 131 270 1.0E-50 T 23-04-2016 MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 PANTHER PTHR13779:SF28 1 187 4.1E-73 T 23-04-2016 MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 PANTHER PTHR13779:SF28 214 282 4.1E-73 T 23-04-2016 MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 Gene3D G3DSA:3.40.50.300 58 194 3.0E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 PANTHER PTHR13779 1 187 4.1E-73 T 23-04-2016 MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 PANTHER PTHR13779 214 282 4.1E-73 T 23-04-2016 MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 SUPERFAMILY SSF52540 44 192 9.07E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 SMART SM00382 83 204 0.0041 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS02560 d1e44bfc93e09279b4a2cdb02fcd714a 298 Pfam PF05673 Protein of unknown function (DUF815) 33 282 2.8E-102 T 23-04-2016 IPR008533 Domain of unknown function DUF815 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 568 5.9E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 225 348 3.7E-26 T 23-04-2016 IPR000014 PAS domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SMART SM00086 299 342 4.3E-4 T 23-04-2016 IPR001610 PAC motif MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Pfam PF16448 LapD/MoxY periplasmic domain 30 146 9.3E-6 T 23-04-2016 IPR032244 LapD/MoxY, periplasmic domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SMART SM00387 475 570 6.9E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SUPERFAMILY SSF55874 441 567 2.23E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 PANTHER PTHR24421:SF1 364 567 6.6E-39 T 23-04-2016 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 PANTHER PTHR24421:SF1 112 123 6.6E-39 T 23-04-2016 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 PANTHER PTHR24421 364 567 6.6E-39 T 23-04-2016 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 PANTHER PTHR24421 112 123 6.6E-39 T 23-04-2016 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SMART SM00091 227 293 1.2E-15 T 23-04-2016 IPR000014 PAS domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Gene3D G3DSA:3.30.450.20 231 345 2.4E-27 T 23-04-2016 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SMART SM00304 172 224 4.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Pfam PF00989 PAS fold 228 339 8.6E-20 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Pfam PF07730 Histidine kinase 369 435 2.4E-10 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SUPERFAMILY SSF158472 174 220 1.7E-5 T 23-04-2016 MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Gene3D G3DSA:3.30.565.10 442 568 1.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 SUPERFAMILY SSF55785 232 345 7.5E-26 T 23-04-2016 IPR000014 PAS domain MSIP34_RS07975 361677525f139e458b99b757effc76ed 572 Pfam PF00672 HAMP domain 154 219 3.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 SUPERFAMILY SSF51161 250 433 2.27E-48 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 447 42.277 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 3 449 1.0E-191 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 PANTHER PTHR22572 3 444 5.5E-208 T 23-04-2016 MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Gene3D G3DSA:2.160.10.10 320 447 3.8E-35 T 23-04-2016 MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Pfam PF12804 MobA-like NTP transferase domain 5 119 9.6E-22 T 23-04-2016 IPR025877 MobA-like NTP transferase MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 SUPERFAMILY SSF53448 2 247 3.55E-63 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Gene3D G3DSA:2.160.10.10 260 319 1.0E-11 T 23-04-2016 MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 313 346 7.4E-4 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 390 423 7.1E-10 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 262 295 3.1E-5 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 Gene3D G3DSA:3.90.550.10 1 243 5.9E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS14100 0ec03fd653f3071f6424d4e92bf2e6bf 452 PANTHER PTHR22572:SF115 3 444 5.5E-208 T 23-04-2016 MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 PANTHER PTHR32303 2 378 1.2E-70 T 23-04-2016 MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 4 385 4.5E-129 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 PANTHER PTHR32303:SF8 2 378 1.2E-70 T 23-04-2016 MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 387 35.17 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 Pfam PF13360 PQQ-like domain 84 313 4.1E-56 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SUPERFAMILY SSF50998 39 377 3.45E-74 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 109 140 0.61 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 148 180 7.7 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 69 101 28.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 282 314 230.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 245 276 6.4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 323 355 180.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 SMART SM00564 193 225 2.4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS08670 40c4c1befd2f91db462727f5728db4aa 388 Gene3D G3DSA:2.140.10.10 5 387 9.8E-64 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 SUPERFAMILY SSF54782 227 315 3.79E-25 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 Gene3D G3DSA:3.30.160.40 228 311 1.3E-24 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 238 254 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PRINTS PR00151 Porphobilinogen deaminase signature 52 72 2.7E-47 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PRINTS PR00151 Porphobilinogen deaminase signature 237 254 2.7E-47 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PRINTS PR00151 Porphobilinogen deaminase signature 131 148 2.7E-47 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PRINTS PR00151 Porphobilinogen deaminase signature 150 167 2.7E-47 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PRINTS PR00151 Porphobilinogen deaminase signature 83 102 2.7E-47 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 Gene3D G3DSA:3.40.190.10 11 117 6.7E-48 T 23-04-2016 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 SUPERFAMILY SSF53850 12 225 8.31E-82 T 23-04-2016 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 233 302 1.3E-15 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 13 218 5.9E-77 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PANTHER PTHR11557 11 316 1.0E-148 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 12 304 37.371 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 Gene3D G3DSA:3.40.190.10 118 206 2.4E-39 T 23-04-2016 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 PIRSF PIRSF001438 2 319 1.1E-116 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00170 ff3485fdabe5a1fd137f99f86ba73881 320 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 13 304 1.1E-107 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 PANTHER PTHR11953 1 165 1.1E-53 T 23-04-2016 MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 1 165 5.1E-78 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 SUPERFAMILY SSF55666 83 165 5.11E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 Gene3D G3DSA:3.30.230.70 9 164 3.0E-20 T 23-04-2016 IPR027408 PNPase/RNase PH domain MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 ProSitePatterns PS01277 Ribonuclease PH signature. 45 57 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 SUPERFAMILY SSF54211 7 110 1.21E-22 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 PANTHER PTHR11953:SF0 1 165 1.1E-53 T 23-04-2016 MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 Pfam PF03725 3' exoribonuclease family, domain 2 87 151 2.9E-9 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS14455 2b2db20e93c5d012f3fe9c8fc2e662fe 167 Pfam PF01138 3' exoribonuclease family, domain 1 9 69 4.7E-10 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 Gene3D G3DSA:2.120.10.30 13 20 1.8E-64 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 Gene3D G3DSA:2.120.10.30 62 435 1.8E-64 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 PANTHER PTHR19328 129 434 9.6E-172 T 23-04-2016 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 PANTHER PTHR19328 42 98 9.6E-172 T 23-04-2016 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 PANTHER PTHR19328:SF26 129 434 9.6E-172 T 23-04-2016 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 PANTHER PTHR19328:SF26 42 98 9.6E-172 T 23-04-2016 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 Pfam PF07995 Glucose / Sorbosone dehydrogenase 200 361 2.4E-14 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 SUPERFAMILY SSF50952 60 95 2.35E-34 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 MSIP34_RS08100 f24607db957edffff2d77fae8143ac16 445 SUPERFAMILY SSF50952 126 435 2.35E-34 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 PANTHER PTHR11851 35 434 2.8E-75 T 23-04-2016 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 Gene3D G3DSA:3.30.830.10 261 436 1.4E-31 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 Gene3D G3DSA:3.30.830.10 28 241 2.6E-41 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 SUPERFAMILY SSF63411 259 437 1.83E-45 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 Pfam PF00675 Insulinase (Peptidase family M16) 48 181 1.8E-10 T 23-04-2016 IPR011765 Peptidase M16, N-terminal MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 SUPERFAMILY SSF63411 27 233 1.92E-43 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 PANTHER PTHR11851:SF140 35 434 2.8E-75 T 23-04-2016 MSIP34_RS09720 43ff2fa20f812d509bfdcd19e1cc7753 438 Pfam PF05193 Peptidase M16 inactive domain 195 370 3.9E-34 T 23-04-2016 IPR007863 Peptidase M16, C-terminal MSIP34_RS08915 5024d93b0657bdbbd64c969d53f6fa71 247 PANTHER PTHR30625:SF3 2 219 7.5E-51 T 23-04-2016 MSIP34_RS08915 5024d93b0657bdbbd64c969d53f6fa71 247 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 209 2.8E-38 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS08915 5024d93b0657bdbbd64c969d53f6fa71 247 PANTHER PTHR30625 2 219 7.5E-51 T 23-04-2016 MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 SUPERFAMILY SSF52317 287 541 8.43E-84 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 Pfam PF06418 CTP synthase N-terminus 3 265 1.4E-127 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 Gene3D G3DSA:3.40.50.300 1 282 1.9E-134 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 Hamap MF_01227 CTP synthase [pyrG]. 2 540 51.78 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 PANTHER PTHR11550 1 542 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 TIGRFAM TIGR00337 PyrG: CTP synthase 1 535 7.4E-247 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 Gene3D G3DSA:3.40.50.880 288 541 1.4E-95 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 Pfam PF00117 Glutamine amidotransferase class-I 300 534 5.2E-57 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS04375 55020de8cefc1c8891184d1a738850e8 542 SUPERFAMILY SSF52540 1 266 6.83E-123 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Pfam PF00515 Tetratricopeptide repeat 149 177 5.2E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 PANTHER PTHR23083 22 286 6.7E-62 T 23-04-2016 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Gene3D G3DSA:2.60.120.620 345 533 4.7E-43 T 23-04-2016 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Pfam PF13432 Tetratricopeptide repeat 186 234 9.3E-11 T 23-04-2016 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Gene3D G3DSA:1.25.40.10 105 163 1.2E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Gene3D G3DSA:1.25.40.10 164 275 4.9E-31 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Gene3D G3DSA:1.25.40.10 23 104 9.2E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SUPERFAMILY SSF51197 423 532 1.37E-5 T 23-04-2016 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SUPERFAMILY SSF48452 33 274 2.54E-47 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 432 528 9.1E-26 T 23-04-2016 IPR012668 Conserved hypothetical protein CHP02466 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 249 282 200.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 215 248 3.9E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 182 214 0.047 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 148 181 3.2E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 46 79 0.085 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 80 113 4.5E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 SMART SM00028 114 147 1.1E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05350 533c0e6f4c0d5fbd404ef6f2743ac670 566 Pfam PF13424 Tetratricopeptide repeat 79 144 8.1E-12 T 23-04-2016 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 Pfam PF00593 TonB dependent receptor 475 706 2.2E-24 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 71 704 2.7E-95 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 Gene3D G3DSA:2.170.130.10 48 176 5.6E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 167 8.1E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 SUPERFAMILY SSF56935 24 707 1.25E-119 T 23-04-2016 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 PANTHER PTHR32552:SF37 1 36 1.4E-189 T 23-04-2016 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 PANTHER PTHR32552:SF37 61 707 1.4E-189 T 23-04-2016 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 Gene3D G3DSA:2.40.170.20 184 707 1.2E-118 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 PANTHER PTHR32552 1 36 1.4E-189 T 23-04-2016 MSIP34_RS02225 451de61be170d089c44828070758d22b 707 PANTHER PTHR32552 61 707 1.4E-189 T 23-04-2016 MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 PRINTS PR00599 Methionine aminopeptidase-1 signature 251 267 1.5E-7 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 PRINTS PR00599 Methionine aminopeptidase-1 signature 369 381 1.5E-7 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 PRINTS PR00599 Methionine aminopeptidase-1 signature 229 242 1.5E-7 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 Gene3D G3DSA:3.90.230.10 177 432 1.9E-87 T 23-04-2016 IPR000994 Peptidase M24, structural domain MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 Gene3D G3DSA:3.40.350.10 7 176 6.9E-51 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 PANTHER PTHR10804:SF17 8 432 2.5E-143 T 23-04-2016 MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 SMART SM01011 4 134 1.7E-56 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 346 358 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 PANTHER PTHR10804 8 432 2.5E-143 T 23-04-2016 MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 SUPERFAMILY SSF55920 173 431 1.83E-85 T 23-04-2016 IPR000994 Peptidase M24, structural domain MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 SUPERFAMILY SSF53092 6 172 1.57E-49 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 Pfam PF05195 Aminopeptidase P, N-terminal domain 8 121 7.2E-35 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 MSIP34_RS02960 39fe2a6e6f4c0548cb6a0dec1c4fce0a 434 Pfam PF00557 Metallopeptidase family M24 179 410 4.8E-66 T 23-04-2016 IPR000994 Peptidase M24, structural domain MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 SUPERFAMILY SSF50129 1 95 4.24E-35 T 23-04-2016 IPR011032 GroES-like MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 PRINTS PR00297 10kDa chaperonin signature 81 94 2.5E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.5E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.5E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.5E-35 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 Gene3D G3DSA:2.30.33.40 2 95 4.7E-39 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 PANTHER PTHR10772 1 95 9.0E-44 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 SMART SM00883 2 94 3.3E-57 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.481 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS02065 bcbe09177e9eb0c5bf763f56da8ba3a5 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 3.3E-36 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS13005 574ebb8fc2d1fb62e53d2c6c1b4858c6 425 Pfam PF08886 Glutamate-cysteine ligase 17 418 1.3E-203 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA MSIP34_RS13005 574ebb8fc2d1fb62e53d2c6c1b4858c6 425 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 421 2.7E-194 T 23-04-2016 IPR011718 Glutamate--cysteine ligase GshA MSIP34_RS13005 574ebb8fc2d1fb62e53d2c6c1b4858c6 425 SUPERFAMILY SSF56059 257 406 3.74E-7 T 23-04-2016 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 262 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 169 213 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 SUPERFAMILY SSF46689 167 218 3.04E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 PANTHER PTHR11019:SF77 36 274 7.3E-41 T 23-04-2016 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 Gene3D G3DSA:1.10.10.60 222 268 6.9E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 Gene3D G3DSA:1.10.10.60 166 221 1.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 Pfam PF12833 Helix-turn-helix domain 190 268 2.3E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 Gene3D G3DSA:2.60.120.10 38 85 2.5E-4 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 SUPERFAMILY SSF46689 220 269 3.85E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 Pfam PF12852 Cupin 2 153 1.2E-22 T 23-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 PANTHER PTHR11019 36 274 7.3E-41 T 23-04-2016 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 SMART SM00342 184 266 4.1E-25 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13265 7d2ed62d4fefd32c35289a4c910ef1db 274 SUPERFAMILY SSF51215 34 150 1.29E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Gene3D G3DSA:2.150.10.10 66 177 3.1E-20 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Gene3D G3DSA:2.150.10.10 185 373 2.7E-27 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Gene3D G3DSA:2.150.10.10 509 732 5.2E-38 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 SUPERFAMILY SSF51120 404 506 1.26E-14 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 SUPERFAMILY SSF51120 519 711 7.56E-28 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 PRINTS PR00313 NodO calcium binding signature 280 288 3.0E-10 T 23-04-2016 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 PRINTS PR00313 NodO calcium binding signature 108 119 3.0E-10 T 23-04-2016 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 PRINTS PR00313 NodO calcium binding signature 344 353 3.0E-10 T 23-04-2016 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 PRINTS PR00313 NodO calcium binding signature 298 306 3.0E-10 T 23-04-2016 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 602 620 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 620 638 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 611 629 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 303 321 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 285 303 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 107 125 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 SUPERFAMILY SSF51120 81 249 1.12E-20 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 262 274 13.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 194 209 0.28 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 624 639 0.0043 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 130 145 0.98 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 165 176 17.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 534 550 0.04 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 110 127 6.1E-4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 570 586 0.03 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 150 163 0.034 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 606 622 0.038 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 212 226 21.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 341 351 9.4 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 483 499 0.21 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 290 305 0.005 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 308 323 0.033 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 516 532 4.8 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 552 568 0.01 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 449 463 12.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 467 481 7.6 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 237 249 65.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 407 418 18.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 588 604 1.6 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 SUPERFAMILY SSF51120 237 354 1.59E-17 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 615 636 2.2E-6 T 23-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 MSIP34_RS04345 dfbc2dc628de4192752da676f66b50c6 772 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 19 37 2.2E-6 T 23-04-2016 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Gene3D G3DSA:3.30.930.10 246 534 2.0E-126 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 SUPERFAMILY SSF52954 533 635 7.4E-30 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 71 638 35.186 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 SMART SM00863 174 223 2.1E-25 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Gene3D G3DSA:3.40.50.800 535 636 4.0E-34 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PANTHER PTHR11451:SF31 1 636 0.0 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PANTHER PTHR11451 1 636 0.0 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 550 4.0E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 4.0E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 524 4.0E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 468 496 4.0E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 4.0E-54 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 77 635 2.1E-230 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 SUPERFAMILY SSF81271 3 66 5.56E-8 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Gene3D G3DSA:3.10.20.30 1 69 2.5E-15 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Gene3D G3DSA:3.30.980.10 192 228 1.9E-44 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Gene3D G3DSA:3.30.980.10 71 134 1.9E-44 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 SUPERFAMILY SSF55681 247 530 7.93E-105 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 322 533 2.7E-48 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Pfam PF03129 Anticodon binding domain 545 634 4.0E-20 T 23-04-2016 IPR004154 Anticodon-binding MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 SUPERFAMILY SSF55186 69 245 7.85E-69 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Gene3D G3DSA:3.30.54.20 136 191 1.0E-21 T 23-04-2016 MSIP34_RS03670 557ac9b44f2a6c0da7add3ccd1228f5b 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 223 1.8E-15 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 MSIP34_RS13275 f28532d81f9f5cd0d00a5dff722d9b1b 256 PANTHER PTHR11614 6 255 3.9E-69 T 23-04-2016 MSIP34_RS13275 f28532d81f9f5cd0d00a5dff722d9b1b 256 PANTHER PTHR11614:SF108 6 255 3.9E-69 T 23-04-2016 MSIP34_RS13275 f28532d81f9f5cd0d00a5dff722d9b1b 256 SUPERFAMILY SSF53474 3 138 2.14E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS13275 f28532d81f9f5cd0d00a5dff722d9b1b 256 SUPERFAMILY SSF53474 183 253 2.14E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS13275 f28532d81f9f5cd0d00a5dff722d9b1b 256 Pfam PF12146 Serine aminopeptidase, S33 28 140 5.6E-12 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 MSIP34_RS13275 f28532d81f9f5cd0d00a5dff722d9b1b 256 Gene3D G3DSA:3.40.50.1820 1 247 2.6E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 Gene3D G3DSA:3.40.50.720 8 169 3.5E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 172 289 9.0E-21 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 SUPERFAMILY SSF51735 10 169 9.32E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 PANTHER PTHR22981 10 303 3.0E-102 T 23-04-2016 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 PANTHER PTHR22981:SF62 10 303 3.0E-102 T 23-04-2016 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 SUPERFAMILY SSF48179 170 298 4.08E-28 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 Gene3D G3DSA:1.10.1040.10 172 298 1.8E-28 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 PIRSF PIRSF000103 2 299 1.4E-70 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 10 166 4.7E-36 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 MSIP34_RS11560 c65ad2d16210271f4031963840a57cc0 304 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 12 25 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 PANTHER PTHR30328:SF4 3 162 1.0E-25 T 23-04-2016 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 SUPERFAMILY SSF48498 75 181 2.97E-8 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.0E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.0E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 SUPERFAMILY SSF46689 4 67 3.34E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 Gene3D G3DSA:1.10.357.10 5 181 2.5E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 PANTHER PTHR30328 3 162 1.0E-25 T 23-04-2016 MSIP34_RS10055 87148882bd171870b8580a6bb2b19dac 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 3.6E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SUPERFAMILY SSF143517 984 1133 7.72E-39 T 23-04-2016 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 PANTHER PTHR14025:SF21 370 1131 0.0 T 23-04-2016 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SUPERFAMILY SSF52540 513 773 2.11E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Pfam PF03461 TRCF domain 999 1092 4.5E-28 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SUPERFAMILY SSF52540 343 454 2.94E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Pfam PF02559 CarD-like/TRCF domain 470 565 1.4E-25 T 23-04-2016 IPR003711 CarD-like/TRCF domain MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Gene3D G3DSA:3.30.2060.10 129 202 5.4E-12 T 23-04-2016 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SUPERFAMILY SSF52540 772 980 6.62E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Gene3D G3DSA:3.40.50.300 583 776 1.5E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SUPERFAMILY SSF52540 12 339 5.42E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Gene3D G3DSA:3.40.50.300 788 953 3.6E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SMART SM00487 590 780 2.8E-37 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 19 1124 28.505 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Pfam PF00271 Helicase conserved C-terminal domain 798 899 1.8E-16 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SMART SM00982 998 1098 3.9E-46 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 144 1072 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SMART SM00490 816 900 5.8E-16 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SUPERFAMILY SSF141259 462 538 7.32E-21 T 23-04-2016 IPR003711 CarD-like/TRCF domain MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 Pfam PF00270 DEAD/DEAH box helicase 595 755 1.1E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 SMART SM01058 469 566 6.6E-48 T 23-04-2016 IPR003711 CarD-like/TRCF domain MSIP34_RS06330 1c5f189c0504fd29f7b6bbc81e634c1d 1134 PANTHER PTHR14025 370 1131 0.0 T 23-04-2016 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 SUPERFAMILY SSF50447 453 551 6.36E-17 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 873 202.801 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PANTHER PTHR11777 1 874 0.0 T 23-04-2016 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 Pfam PF02272 DHHA1 domain 799 866 3.7E-16 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 SUPERFAMILY SSF55186 551 710 4.32E-49 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 SUPERFAMILY SSF101353 252 446 6.54E-61 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 694 3.4E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 SMART SM00863 652 694 1.9E-20 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 852 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 Gene3D G3DSA:3.30.930.10 1 248 1.8E-125 T 23-04-2016 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PANTHER PTHR11777:SF9 1 874 0.0 T 23-04-2016 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 8.0E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 8.0E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 8.0E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 8.0E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 8.0E-32 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 SUPERFAMILY SSF55681 2 251 3.48E-108 T 23-04-2016 MSIP34_RS11020 dc8c6b5a92a6945d5f034ca5a9be8dab 874 Pfam PF01411 tRNA synthetases class II (A) 5 553 9.6E-220 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 MSIP34_RS10075 ee751abe5a0c13a0c180106c3ef2877b 654 SUPERFAMILY SSF52540 41 160 1.8E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10075 ee751abe5a0c13a0c180106c3ef2877b 654 SUPERFAMILY SSF52540 190 354 1.8E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10075 ee751abe5a0c13a0c180106c3ef2877b 654 Pfam PF00350 Dynamin family 59 259 3.2E-14 T 23-04-2016 IPR022812 Dynamin superfamily MSIP34_RS10075 ee751abe5a0c13a0c180106c3ef2877b 654 Gene3D G3DSA:3.40.50.300 118 145 1.5E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10075 ee751abe5a0c13a0c180106c3ef2877b 654 Gene3D G3DSA:3.40.50.300 58 77 1.5E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10075 ee751abe5a0c13a0c180106c3ef2877b 654 Gene3D G3DSA:3.40.50.300 209 319 1.5E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PANTHER PTHR24322 12 137 1.1E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PANTHER PTHR24322 153 185 1.1E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 5.2E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.2E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.2E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.2E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.2E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.2E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 Gene3D G3DSA:3.40.50.720 4 257 1.5E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PANTHER PTHR24322:SF25 153 185 1.1E-65 T 23-04-2016 MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 PANTHER PTHR24322:SF25 12 137 1.1E-65 T 23-04-2016 MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 SUPERFAMILY SSF51735 3 258 3.15E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11850 1e6c18eb4ac1bafe4310299f9f802dc8 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 257 2.0E-44 T 23-04-2016 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 PANTHER PTHR21090 6 424 1.0E-190 T 23-04-2016 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 Gene3D G3DSA:3.65.10.10 239 425 5.0E-73 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 Gene3D G3DSA:3.65.10.10 22 238 8.6E-70 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 SUPERFAMILY SSF55205 1 426 6.67E-129 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 427 8.9E-139 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 PANTHER PTHR21090:SF21 6 424 1.0E-190 T 23-04-2016 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 430 33.525 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 PIRSF PIRSF000505 1 431 6.9E-147 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 ProSitePatterns PS00885 EPSP synthase signature 2. 341 359 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 ProSitePatterns PS00104 EPSP synthase signature 1. 88 102 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 MSIP34_RS05650 48e61d72f8fe34d773164994236189d9 432 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 423 2.3E-133 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 Gene3D G3DSA:3.40.50.300 11 202 1.2E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 SUPERFAMILY SSF52540 6 203 9.95E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 PIRSF PIRSF005624 2 207 7.7E-50 T 23-04-2016 MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 14 184 1.4E-38 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 12 206 3.9E-107 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 PANTHER PTHR31715 10 207 2.1E-132 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 MSIP34_RS03625 2acbef298d5d0d3ea48d190a416422b6 208 Hamap MF_01389 Urease accessory protein UreG [ureG]. 10 208 47.967 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Gene3D G3DSA:3.30.470.20 104 122 1.7E-52 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Gene3D G3DSA:3.30.470.20 193 317 1.7E-52 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 24 318 35.921 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 82 93 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 25 317 2.8E-104 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Gene3D G3DSA:3.40.50.20 25 103 1.8E-26 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Pfam PF01820 D-ala D-ala ligase N-terminus 25 105 3.1E-22 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 SUPERFAMILY SSF56059 115 317 3.7E-58 T 23-04-2016 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Pfam PF07478 D-ala D-ala ligase C-terminus 122 315 2.2E-58 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 260 288 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 PANTHER PTHR23132 25 319 2.2E-89 T 23-04-2016 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 Gene3D G3DSA:3.30.1490.20 126 192 4.1E-21 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS02360 0b49f1a81c9834772c24e3f0bfd776e6 320 SUPERFAMILY SSF52440 25 115 8.54E-28 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS04050 aae5a056eaa3a69182eb74f3ea148c3b 179 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 178 43.594 T 23-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MSIP34_RS04050 aae5a056eaa3a69182eb74f3ea148c3b 179 PIRSF PIRSF003159 1 179 1.5E-90 T 23-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MSIP34_RS04050 aae5a056eaa3a69182eb74f3ea148c3b 179 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 4 178 2.0E-68 T 23-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MSIP34_RS04050 aae5a056eaa3a69182eb74f3ea148c3b 179 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 173 1.3E-84 T 23-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 MSIP34_RS04050 aae5a056eaa3a69182eb74f3ea148c3b 179 SUPERFAMILY SSF160930 5 161 1.44E-62 T 23-04-2016 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 PANTHER PTHR11075:SF6 2 324 2.3E-155 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 Pfam PF00472 RF-1 domain 190 298 2.2E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 Gene3D G3DSA:3.30.160.20 189 267 6.5E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 SMART SM00937 46 156 1.0E-57 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 324 7.2E-154 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 206 222 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 Pfam PF03462 PCRF domain 2 181 1.8E-57 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 SUPERFAMILY SSF75620 2 323 1.44E-130 T 23-04-2016 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 PANTHER PTHR11075 2 324 2.3E-155 T 23-04-2016 MSIP34_RS09400 54fba3bd4129581dbb4bda5f46d3b12a 326 Gene3D G3DSA:1.20.58.410 2 77 6.2E-20 T 23-04-2016 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 Pfam PF00970 Oxidoreductase FAD-binding domain 154 254 2.0E-7 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 SUPERFAMILY SSF63380 153 256 2.38E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 Gene3D G3DSA:1.10.490.10 3 142 8.7E-50 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 SUPERFAMILY SSF52343 260 388 1.57E-28 T 23-04-2016 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 Pfam PF00175 Oxidoreductase NAD-binding domain 268 368 1.9E-10 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 Gene3D G3DSA:3.40.50.80 259 388 5.0E-26 T 23-04-2016 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PANTHER PTHR22924 1 390 1.1E-112 T 23-04-2016 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 Gene3D G3DSA:2.40.30.10 153 256 8.4E-29 T 23-04-2016 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 Pfam PF00042 Globin 10 103 1.8E-8 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 292 301 5.2E-7 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 354 362 5.2E-7 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 267 286 5.2E-7 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 182 194 5.2E-7 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PANTHER PTHR22924:SF49 1 390 1.1E-112 T 23-04-2016 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 SUPERFAMILY SSF46458 2 143 2.16E-38 T 23-04-2016 IPR009050 Globin-like MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 354 362 6.7E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 304 315 6.7E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 267 286 6.7E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 231 240 6.7E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS10725 5af6ba608534847c606c73d4852104ca 395 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 202 209 6.7E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS02265 6bbea8d580690a84d49a97eadc45d5ce 559 PANTHER PTHR10566 1 547 3.3E-147 T 23-04-2016 MSIP34_RS02265 6bbea8d580690a84d49a97eadc45d5ce 559 SUPERFAMILY SSF56112 199 436 2.84E-30 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS02265 6bbea8d580690a84d49a97eadc45d5ce 559 SUPERFAMILY SSF56112 101 164 2.84E-30 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS02265 6bbea8d580690a84d49a97eadc45d5ce 559 Gene3D G3DSA:3.90.1200.10 266 318 2.8E-8 T 23-04-2016 MSIP34_RS02265 6bbea8d580690a84d49a97eadc45d5ce 559 Pfam PF03109 ABC1 family 119 236 1.9E-31 T 23-04-2016 IPR004147 UbiB domain MSIP34_RS02265 6bbea8d580690a84d49a97eadc45d5ce 559 PANTHER PTHR10566:SF10 1 547 3.3E-147 T 23-04-2016 MSIP34_RS00155 6901eef933fff98e1dd531cf8ada8315 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 385 1.0E-112 T 23-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 MSIP34_RS00155 6901eef933fff98e1dd531cf8ada8315 393 Gene3D G3DSA:1.25.40.10 86 390 1.1E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00155 6901eef933fff98e1dd531cf8ada8315 393 SUPERFAMILY SSF48452 88 289 5.9E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00155 6901eef933fff98e1dd531cf8ada8315 393 SUPERFAMILY SSF48452 250 391 1.09E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00155 6901eef933fff98e1dd531cf8ada8315 393 Pfam PF07219 HemY protein N-terminus 26 130 2.1E-30 T 23-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 SUPERFAMILY SSF55681 428 589 1.38E-107 T 23-04-2016 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 SUPERFAMILY SSF55681 110 293 1.38E-107 T 23-04-2016 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Gene3D G3DSA:3.30.1360.30 278 416 1.1E-46 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.0E-17 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PANTHER PTHR22594 1 298 1.0E-252 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PANTHER PTHR22594 373 575 1.0E-252 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PANTHER PTHR22594:SF5 1 298 1.0E-252 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PANTHER PTHR22594:SF5 373 575 1.0E-252 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 SUPERFAMILY SSF55261 292 420 2.78E-41 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 567 36.871 T 23-04-2016 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Gene3D G3DSA:2.40.50.140 1 107 1.8E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 3.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 3.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 3.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 3.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 562 5.2E-111 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Pfam PF02938 GAD domain 309 409 8.3E-28 T 23-04-2016 IPR029351 GAD domain MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Gene3D G3DSA:3.30.930.10 132 277 1.6E-119 T 23-04-2016 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 Gene3D G3DSA:3.30.930.10 417 589 1.6E-119 T 23-04-2016 MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 SUPERFAMILY SSF50249 1 105 4.19E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12330 a8be8a2320cfd5c02595eb738132d838 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 587 9.6E-254 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 Gene3D G3DSA:3.20.20.140 2 250 1.9E-73 T 23-04-2016 MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 PANTHER PTHR10060 2 255 3.2E-76 T 23-04-2016 IPR001130 TatD family GO:0016788 MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 SUPERFAMILY SSF51556 2 250 1.0E-75 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 PIRSF PIRSF005902 1 253 2.4E-61 T 23-04-2016 IPR001130 TatD family GO:0016788 MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 187 203 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 MSIP34_RS04265 1d647a8380afd0353ec516ecb2d4ffb0 255 Pfam PF01026 TatD related DNase 3 250 2.5E-63 T 23-04-2016 IPR001130 TatD family GO:0016788 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 3.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 438 3.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 Gene3D G3DSA:3.30.565.10 349 441 1.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 PANTHER PTHR24421 39 104 9.8E-47 T 23-04-2016 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 PANTHER PTHR24421 239 444 9.8E-47 T 23-04-2016 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 SMART SM00387 349 441 1.5E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 SUPERFAMILY SSF55874 317 438 4.58E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 438 4.4E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 Gene3D G3DSA:3.30.450.20 91 214 1.3E-7 T 23-04-2016 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 Pfam PF07730 Histidine kinase 244 310 5.6E-12 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MSIP34_RS03750 41b6df944dc0c8ec16ad684c521a6aa5 446 SUPERFAMILY SSF55785 89 214 1.47E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS07345 065833bc68ac9fc6243bb62b43e30ca7 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 180 4.0E-71 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MSIP34_RS07345 065833bc68ac9fc6243bb62b43e30ca7 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 171 1.9E-72 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MSIP34_RS07345 065833bc68ac9fc6243bb62b43e30ca7 181 PANTHER PTHR21047 1 174 1.9E-72 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MSIP34_RS07345 065833bc68ac9fc6243bb62b43e30ca7 181 Gene3D G3DSA:2.60.120.10 1 172 1.8E-78 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS07345 065833bc68ac9fc6243bb62b43e30ca7 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 171 2.0E-82 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 MSIP34_RS07345 065833bc68ac9fc6243bb62b43e30ca7 181 SUPERFAMILY SSF51182 1 174 3.65E-75 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 SUPERFAMILY SSF55811 3 159 3.38E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 Gene3D G3DSA:3.90.79.10 3 150 1.7E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 PANTHER PTHR23114 1 153 6.7E-39 T 23-04-2016 MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.2E-7 T 23-04-2016 IPR020476 NUDIX hydrolase MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.2E-7 T 23-04-2016 IPR020476 NUDIX hydrolase MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 Pfam PF00293 NUDIX domain 7 137 1.4E-23 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.961 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH MSIP34_RS03075 5b94efc51871ea3d7a8fe08a44ceb56b 173 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 MSIP34_RS13555 b9bd48c79fbb4e7055a52d188900cd06 165 SUPERFAMILY SSF64438 14 164 1.83E-41 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic MSIP34_RS13555 b9bd48c79fbb4e7055a52d188900cd06 165 PANTHER PTHR35147:SF1 12 165 2.2E-38 T 23-04-2016 MSIP34_RS13555 b9bd48c79fbb4e7055a52d188900cd06 165 Pfam PF03975 CheD chemotactic sensory transduction 65 161 9.0E-26 T 23-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 MSIP34_RS13555 b9bd48c79fbb4e7055a52d188900cd06 165 PANTHER PTHR35147 12 165 2.2E-38 T 23-04-2016 MSIP34_RS13555 b9bd48c79fbb4e7055a52d188900cd06 165 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 8 165 22.787 T 23-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 Pfam PF00263 Bacterial type II and III secretion system protein 553 707 3.0E-47 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 SMART SM00965 304 352 2.3E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 Pfam PF11741 AMIN domain 50 131 1.2E-9 T 23-04-2016 IPR021731 AMIN domain MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 Pfam PF07660 Secretin and TonB N terminus short domain 305 351 3.2E-7 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 279 707 1.7E-151 T 23-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PANTHER PTHR30604 546 714 1.4E-105 T 23-04-2016 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PANTHER PTHR30604 163 525 1.4E-105 T 23-04-2016 MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 Pfam PF03958 Bacterial type II/III secretion system short domain 377 442 5.8E-11 T 23-04-2016 IPR005644 NolW-like MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 695 709 2.57E-15 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 2.57E-15 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 584 594 2.57E-15 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 549 573 2.57E-15 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS12585 66a3fb1d438d85f5571c2be4bbb3a32b 714 PRINTS PR00811 Bacterial general secretion pathway protein D signature 672 690 2.57E-15 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 8.1E-99 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 1.2E-42 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.6E-51 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.6E-51 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.6E-51 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.6E-51 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.6E-51 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 Gene3D G3DSA:3.30.572.10 1 264 2.8E-137 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 PANTHER PTHR11548 1 264 9.3E-196 T 23-04-2016 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 SUPERFAMILY SSF55831 1 264 2.62E-133 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 Pfam PF00303 Thymidylate synthase 2 264 1.0E-126 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.397 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS04475 fb9f6c7b18fe9d69a98ceff3daeb5464 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 PIRSF PIRSF005902 1 255 2.5E-77 T 23-04-2016 IPR001130 TatD family GO:0016788 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 Gene3D G3DSA:3.20.20.140 1 252 2.1E-85 T 23-04-2016 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 Pfam PF01026 TatD related DNase 3 251 1.7E-76 T 23-04-2016 IPR001130 TatD family GO:0016788 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 PANTHER PTHR10060 1 255 3.9E-118 T 23-04-2016 IPR001130 TatD family GO:0016788 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 PANTHER PTHR10060:SF20 1 255 3.9E-118 T 23-04-2016 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 SUPERFAMILY SSF51556 2 252 2.98E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS07010 e96bd03d7c44798fc1405fc7c9a76808 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 5.7E-84 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 184 4.6E-57 T 23-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 PANTHER PTHR30244:SF5 1 301 8.7E-66 T 23-04-2016 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 SUPERFAMILY SSF64518 1 301 7.32E-62 T 23-04-2016 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 PANTHER PTHR30244 1 301 8.7E-66 T 23-04-2016 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 Gene3D G3DSA:1.20.1330.10 59 169 8.2E-13 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 Gene3D G3DSA:1.20.1330.10 206 257 8.2E-13 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 1.6E-17 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS03930 db46137e900f264e3feb16c5cd62960b 301 Pfam PF00700 Bacterial flagellin C-terminal helical region 221 300 7.5E-5 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 PANTHER PTHR12526 10 491 1.8E-131 T 23-04-2016 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 PANTHER PTHR12526:SF386 10 491 1.8E-131 T 23-04-2016 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 SUPERFAMILY SSF56784 477 685 6.83E-29 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Gene3D G3DSA:3.90.1070.10 564 629 2.5E-23 T 23-04-2016 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Gene3D G3DSA:3.40.50.2000 213 425 3.6E-24 T 23-04-2016 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Gene3D G3DSA:3.40.50.1000 630 714 2.9E-30 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Gene3D G3DSA:3.40.50.1000 478 554 2.9E-30 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 479 671 4.5E-19 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 SUPERFAMILY SSF53756 29 453 1.88E-66 T 23-04-2016 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Pfam PF00534 Glycosyl transferases group 1 247 425 6.4E-24 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 477 713 1.1E-83 T 23-04-2016 IPR006380 Sucrose-phosphatase, N-terminal MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 TIGRFAM TIGR02471 sucr_syn_bact_C: sucrose-phosphate synthase, sucrose phosphatase-like domain 479 711 5.0E-98 T 23-04-2016 IPR012821 Sucrose phosphate synthase, sucrose phosphatase-like domain MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 Pfam PF13579 Glycosyl transferase 4-like domain 34 225 2.2E-16 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS13850 f9044324014c24b788d2e4b73270d0e3 735 TIGRFAM TIGR02472 sucr_P_syn_N: sucrose-phosphate synthase, putative, glycosyltransferase domain 9 446 2.3E-214 T 23-04-2016 IPR012822 Sucrose-phosphate synthase, glycosyltransferase domain MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Gene3D G3DSA:1.10.8.60 153 214 2.7E-6 T 23-04-2016 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Pfam PF16193 AAA C-terminal domain 184 259 1.5E-19 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 PANTHER PTHR13779:SF7 12 432 3.4E-189 T 23-04-2016 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 SUPERFAMILY SSF52540 11 228 1.08E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Gene3D G3DSA:1.20.272.10 241 339 2.3E-41 T 23-04-2016 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 PANTHER PTHR13779 12 432 3.4E-189 T 23-04-2016 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 51 158 1.9E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Gene3D G3DSA:3.40.50.300 11 152 1.9E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 SUPERFAMILY SSF48019 244 426 6.8E-73 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Gene3D G3DSA:1.10.3710.10 340 433 1.7E-34 T 23-04-2016 MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 Pfam PF12002 MgsA AAA+ ATPase C terminal 260 426 1.4E-65 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal MSIP34_RS06075 333bb8ba05f593c7a33c05f20f6d52a5 440 SMART SM00382 47 164 2.7E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 PANTHER PTHR32303 244 365 3.1E-176 T 23-04-2016 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 PANTHER PTHR32303 398 567 3.1E-176 T 23-04-2016 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 PANTHER PTHR32303 2 222 3.1E-176 T 23-04-2016 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 PANTHER PTHR32303:SF6 244 365 3.1E-176 T 23-04-2016 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 PANTHER PTHR32303:SF6 398 567 3.1E-176 T 23-04-2016 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 PANTHER PTHR32303:SF6 2 222 3.1E-176 T 23-04-2016 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 264 285 - T 23-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 SUPERFAMILY SSF50998 36 596 9.68E-168 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 Pfam PF01011 PQQ enzyme repeat 503 538 6.2E-7 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 Pfam PF13360 PQQ-like domain 112 225 1.4E-10 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 25 557 2.3E-197 T 23-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 Gene3D G3DSA:2.140.10.10 25 598 2.7E-155 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 SMART SM00564 497 529 0.0062 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 SMART SM00564 137 169 0.0067 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 SMART SM00564 268 316 840.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS03755 296a0752b73dcb121c099a0a749f6971 598 SMART SM00564 182 220 0.011 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS11465 61e81b42c4a4c51f14ab41d1a730483e 200 SUPERFAMILY SSF53955 81 190 2.25E-26 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS11465 61e81b42c4a4c51f14ab41d1a730483e 200 PANTHER PTHR21666 60 175 1.3E-16 T 23-04-2016 MSIP34_RS11465 61e81b42c4a4c51f14ab41d1a730483e 200 Pfam PF01464 Transglycosylase SLT domain 89 178 1.8E-16 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS11465 61e81b42c4a4c51f14ab41d1a730483e 200 Gene3D G3DSA:1.10.530.10 81 178 2.0E-23 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:1.20.1640.10 305 497 2.1E-49 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Pfam PF00873 AcrB/AcrD/AcrF family 4 1048 3.4E-196 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:3.30.2090.10 735 816 3.8E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82714 735 825 1.44E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82866 293 491 5.23E-40 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82693 269 325 3.84E-14 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82693 137 183 3.84E-14 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82693 41 135 2.51E-15 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:3.30.70.1320 140 180 1.7E-6 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:3.30.70.1320 271 304 1.7E-6 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PANTHER PTHR32063:SF8 1 497 0.0 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PANTHER PTHR32063:SF8 519 1047 0.0 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82866 830 1051 1.96E-44 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:1.10.3850.10 834 1048 1.9E-49 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:3.30.70.1430 41 139 4.9E-15 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PANTHER PTHR32063 1 497 0.0 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PANTHER PTHR32063 519 1047 0.0 T 23-04-2016 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 Gene3D G3DSA:3.30.2090.10 183 267 1.3E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 SUPERFAMILY SSF82714 184 266 6.28E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 559 576 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13780 0a2a5815ffc90f16fb23a42c02b236a0 1067 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.0E-37 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS01095 5ac583c13de4ab3b44ff73222cd23dbb 655 Pfam PF00999 Sodium/hydrogen exchanger family 8 374 5.8E-63 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MSIP34_RS01095 5ac583c13de4ab3b44ff73222cd23dbb 655 Pfam PF02254 TrkA-N domain 409 522 4.9E-24 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MSIP34_RS01095 5ac583c13de4ab3b44ff73222cd23dbb 655 Gene3D G3DSA:3.40.50.720 405 537 1.6E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS01095 5ac583c13de4ab3b44ff73222cd23dbb 655 SUPERFAMILY SSF116726 567 647 3.27E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 MSIP34_RS01095 5ac583c13de4ab3b44ff73222cd23dbb 655 SUPERFAMILY SSF51735 406 545 1.77E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS01095 5ac583c13de4ab3b44ff73222cd23dbb 655 PANTHER PTHR16254 2 560 4.1E-165 T 23-04-2016 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PRINTS PR00045 Sigma-54 factor signature 384 396 2.9E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PRINTS PR00045 Sigma-54 factor signature 194 211 2.9E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PRINTS PR00045 Sigma-54 factor signature 400 411 2.9E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PRINTS PR00045 Sigma-54 factor signature 458 476 2.9E-31 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.6E-14 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 Pfam PF04963 Sigma-54 factor, core binding domain 120 312 2.9E-50 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 372 391 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 482 2.1E-138 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 Pfam PF04552 Sigma-54, DNA binding domain 325 482 3.0E-67 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 463 470 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PANTHER PTHR32248 1 484 4.4E-150 T 23-04-2016 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PANTHER PTHR32248:SF4 1 484 4.4E-150 T 23-04-2016 MSIP34_RS01065 6e4e90fac848936a160296ac20357af0 484 PIRSF PIRSF000774 1 484 4.0E-150 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 SUPERFAMILY SSF55120 61 228 1.18E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 Gene3D G3DSA:3.10.290.10 1 64 1.7E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 SUPERFAMILY SSF55174 3 81 1.77E-8 T 23-04-2016 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 Pfam PF00849 RNA pseudouridylate synthase 62 193 1.2E-10 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 PANTHER PTHR21600:SF19 1 232 5.5E-55 T 23-04-2016 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 225 1.2E-39 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 PANTHER PTHR21600 1 232 5.5E-55 T 23-04-2016 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS05795 402e51b6de4561d5d24c403579d66184 237 Pfam PF01479 S4 domain 3 37 5.9E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 Pfam PF00990 Diguanylate cyclase, GGDEF domain 287 442 2.0E-38 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 PANTHER PTHR33121 407 719 1.8E-75 T 23-04-2016 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 PANTHER PTHR33121 281 293 1.8E-75 T 23-04-2016 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 Gene3D G3DSA:3.30.450.20 149 281 1.5E-32 T 23-04-2016 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SMART SM00267 276 447 2.0E-49 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SMART SM00052 457 702 8.3E-100 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 PANTHER PTHR33121:SF13 407 719 1.8E-75 T 23-04-2016 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 PANTHER PTHR33121:SF13 281 293 1.8E-75 T 23-04-2016 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 444 1.7E-36 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SUPERFAMILY SSF141868 463 710 2.35E-84 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SMART SM00086 233 276 1.1E-5 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 Pfam PF00563 EAL domain 464 697 1.3E-69 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 Gene3D G3DSA:3.20.20.450 461 709 5.6E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SUPERFAMILY SSF55785 164 278 8.54E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SUPERFAMILY SSF55073 292 449 1.1E-40 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 Gene3D G3DSA:3.30.70.270 289 455 3.3E-46 T 23-04-2016 MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 SUPERFAMILY SSF55781 32 154 3.14E-7 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS13545 38905c23ad91d5cae248f5d4b715ccae 722 Pfam PF08447 PAS fold 181 270 2.7E-16 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS06045 3abd37544f2a999110bd821e511773da 131 PANTHER PTHR21366:SF15 1 124 1.3E-70 T 23-04-2016 MSIP34_RS06045 3abd37544f2a999110bd821e511773da 131 Gene3D G3DSA:3.10.180.10 7 124 1.6E-33 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS06045 3abd37544f2a999110bd821e511773da 131 PANTHER PTHR21366 1 124 1.3E-70 T 23-04-2016 MSIP34_RS06045 3abd37544f2a999110bd821e511773da 131 SUPERFAMILY SSF54593 1 124 2.95E-27 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS06045 3abd37544f2a999110bd821e511773da 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 2.8E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MSIP34_RS00690 755048aa85be2b2df075e3329c6ffd25 474 TIGRFAM TIGR04396 surf_polysacc: surface carbohydrate biosynthesis protein 9 333 5.0E-104 T 23-04-2016 IPR030906 Surface carbohydrate biosynthesis protein MSIP34_RS00690 755048aa85be2b2df075e3329c6ffd25 474 SUPERFAMILY SSF53756 112 370 2.13E-6 T 23-04-2016 MSIP34_RS00955 a40ea72da759076948ee57c477e86d68 281 SUPERFAMILY SSF51730 2 278 9.22E-96 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like MSIP34_RS00955 a40ea72da759076948ee57c477e86d68 281 PANTHER PTHR21091:SF31 135 265 9.9E-34 T 23-04-2016 MSIP34_RS00955 a40ea72da759076948ee57c477e86d68 281 PANTHER PTHR21091 135 265 9.9E-34 T 23-04-2016 MSIP34_RS00955 a40ea72da759076948ee57c477e86d68 281 Gene3D G3DSA:3.20.20.220 2 279 6.6E-103 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like MSIP34_RS00955 a40ea72da759076948ee57c477e86d68 281 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 276 3.5E-98 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 MSIP34_RS00955 a40ea72da759076948ee57c477e86d68 281 Pfam PF02219 Methylenetetrahydrofolate reductase 2 277 1.5E-86 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 451 554 1.8E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Gene3D G3DSA:1.10.287.130 343 405 7.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 SUPERFAMILY SSF47384 339 407 5.89E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Gene3D G3DSA:1.10.3720.10 8 44 5.5E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Gene3D G3DSA:1.10.3720.10 233 301 5.5E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 SMART SM00388 343 409 1.5E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 SMART SM00387 450 556 8.7E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Pfam PF00672 HAMP domain 262 329 2.2E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 PANTHER PTHR24423 42 48 1.7E-71 T 23-04-2016 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 PANTHER PTHR24423 313 554 1.7E-71 T 23-04-2016 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Gene3D G3DSA:3.30.565.10 410 554 1.1E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 501 2.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 553 2.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 534 2.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 515 2.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 SUPERFAMILY SSF55874 403 554 6.81E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS13170 e7ef3ddded031e81cc6bb713fa77e113 559 Pfam PF00512 His Kinase A (phospho-acceptor) domain 345 405 1.0E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 PANTHER PTHR10371 2 157 4.0E-61 T 23-04-2016 MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 157 6.9E-58 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 PIRSF PIRSF000216 1 157 1.7E-56 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 SUPERFAMILY SSF52833 2 156 1.57E-51 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 113 131 - T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 157 1.0E-50 T 23-04-2016 MSIP34_RS03450 1bdc60beb38b046e83953a918513dde3 157 Gene3D G3DSA:3.40.30.10 76 155 4.1E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS07640 69c903735d1767daeed613e16d7e2d61 280 PANTHER PTHR42280:SF1 15 277 1.7E-25 T 23-04-2016 MSIP34_RS07640 69c903735d1767daeed613e16d7e2d61 280 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 11 274 3.0E-63 T 23-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 MSIP34_RS07640 69c903735d1767daeed613e16d7e2d61 280 PANTHER PTHR42280 15 277 1.7E-25 T 23-04-2016 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 SUPERFAMILY SSF47757 3 75 2.35E-18 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 58 9.8E-14 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PIRSF PIRSF000410 1 268 1.7E-99 T 23-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 SUPERFAMILY SSF53335 76 265 3.13E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 261 1.1E-59 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 SMART SM00138 8 268 5.8E-88 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PANTHER PTHR24422 6 265 5.6E-83 T 23-04-2016 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 Gene3D G3DSA:3.40.50.150 75 265 2.4E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 5.8E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 5.8E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PRINTS PR00996 Glutamate methyltransferase family signature 208 222 5.8E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 5.8E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 5.8E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PRINTS PR00996 Glutamate methyltransferase family signature 227 250 5.8E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 PANTHER PTHR24422:SF13 6 265 5.6E-83 T 23-04-2016 MSIP34_RS13560 4d9518e2f3523e34caf9c11a56529ec1 269 Gene3D G3DSA:1.10.155.10 5 74 2.6E-19 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal MSIP34_RS11655 c6eb1b0efcde1d7634061f9ea421ac89 152 SUPERFAMILY SSF52833 6 147 2.5E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11655 c6eb1b0efcde1d7634061f9ea421ac89 152 PANTHER PTHR10681 24 141 3.5E-23 T 23-04-2016 MSIP34_RS11655 c6eb1b0efcde1d7634061f9ea421ac89 152 Gene3D G3DSA:3.40.30.10 7 146 1.0E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11655 c6eb1b0efcde1d7634061f9ea421ac89 152 PANTHER PTHR10681:SF104 24 141 3.5E-23 T 23-04-2016 MSIP34_RS11655 c6eb1b0efcde1d7634061f9ea421ac89 152 Pfam PF00578 AhpC/TSA family 23 133 3.6E-18 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS11655 c6eb1b0efcde1d7634061f9ea421ac89 152 ProSitePatterns PS00194 Thioredoxin family active site. 45 63 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 PANTHER PTHR32303 52 221 5.0E-177 T 23-04-2016 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 PANTHER PTHR32303 272 394 5.0E-177 T 23-04-2016 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 PANTHER PTHR32303 427 592 5.0E-177 T 23-04-2016 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 Pfam PF01011 PQQ enzyme repeat 528 563 7.7E-6 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 PANTHER PTHR32303:SF6 52 221 5.0E-177 T 23-04-2016 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 PANTHER PTHR32303:SF6 272 394 5.0E-177 T 23-04-2016 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 PANTHER PTHR32303:SF6 427 592 5.0E-177 T 23-04-2016 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 297 318 - T 23-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 29 582 5.4E-186 T 23-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 SMART SM00564 523 554 0.0012 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 SMART SM00564 182 219 64.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 SMART SM00564 84 117 52.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 SMART SM00564 136 168 12.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 SUPERFAMILY SSF50998 31 239 3.92E-151 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 SUPERFAMILY SSF50998 274 618 3.92E-151 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 Gene3D G3DSA:2.140.10.10 279 620 5.5E-147 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 Gene3D G3DSA:2.140.10.10 31 244 5.5E-147 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS09170 cb1494bccf508bb1fa0a51a3077f1a6f 625 Pfam PF13360 PQQ-like domain 139 264 1.7E-8 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 Gene3D G3DSA:2.40.170.20 223 496 1.2E-83 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 Gene3D G3DSA:2.40.170.20 528 815 1.2E-83 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 798 815 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 PANTHER PTHR32552:SF33 15 498 2.4E-89 T 23-04-2016 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 PANTHER PTHR32552:SF33 525 815 2.4E-89 T 23-04-2016 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 SUPERFAMILY SSF56935 538 815 6.23E-115 T 23-04-2016 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 SUPERFAMILY SSF56935 80 501 6.23E-115 T 23-04-2016 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 Pfam PF07715 TonB-dependent Receptor Plug Domain 100 208 8.0E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 PANTHER PTHR32552 15 498 2.4E-89 T 23-04-2016 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 PANTHER PTHR32552 525 815 2.4E-89 T 23-04-2016 MSIP34_RS00630 bbd997d1c5c9fd4776d1b8f54af2d69a 815 Gene3D G3DSA:2.170.130.10 81 218 1.1E-31 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 SUPERFAMILY SSF53623 106 310 4.84E-55 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 448 5.4E-130 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 Gene3D G3DSA:3.90.190.20 313 448 8.2E-48 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 PANTHER PTHR23135 1 459 7.6E-157 T 23-04-2016 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 PANTHER PTHR23135:SF2 1 459 7.6E-157 T 23-04-2016 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 SUPERFAMILY SSF51984 3 97 1.83E-16 T 23-04-2016 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 Gene3D G3DSA:3.40.50.720 3 95 5.1E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 451 34.826 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 Gene3D G3DSA:3.40.1190.10 97 312 2.0E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 Pfam PF08245 Mur ligase middle domain 115 293 6.0E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02335 2dec1b0b24e28a1f8309c82863ef9334 460 SUPERFAMILY SSF53244 312 451 6.1E-43 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 PANTHER PTHR21294:SF8 1 249 2.4E-128 T 23-04-2016 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 SMART SM00893 23 211 8.2E-58 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 Gene3D G3DSA:3.40.50.620 1 243 2.3E-93 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 SUPERFAMILY SSF52402 1 242 5.37E-78 T 23-04-2016 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 PIRSF PIRSF000090 1 249 3.6E-78 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 PANTHER PTHR21294 1 249 2.4E-128 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 MSIP34_RS09760 7e087425797bfb768d5a015617f62afc 249 Pfam PF01012 Electron transfer flavoprotein domain 29 204 1.2E-42 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 Pfam PF05199 GMC oxidoreductase 373 523 3.8E-37 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 Pfam PF00732 GMC oxidoreductase 6 307 1.1E-52 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 SUPERFAMILY SSF54373 363 471 8.73E-19 T 23-04-2016 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 Gene3D G3DSA:3.50.50.60 3 136 1.3E-96 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 Gene3D G3DSA:3.50.50.60 200 326 1.3E-96 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 Gene3D G3DSA:3.50.50.60 464 530 1.3E-96 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 PANTHER PTHR11552 6 531 1.1E-132 T 23-04-2016 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 SUPERFAMILY SSF51905 470 530 1.04E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00595 bc90ee6df6f69eb5e33e544bf858e994 531 SUPERFAMILY SSF51905 2 301 1.04E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS08775 a9b4681fb957c68ed2d2f1b6730f2e99 83 SUPERFAMILY SSF54285 1 81 5.61E-20 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp MSIP34_RS08775 a9b4681fb957c68ed2d2f1b6730f2e99 83 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 2 83 5.6E-14 T 23-04-2016 IPR010038 MoaD, archaeal-type MSIP34_RS08775 a9b4681fb957c68ed2d2f1b6730f2e99 83 Gene3D G3DSA:3.10.20.30 1 83 1.8E-23 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS08775 a9b4681fb957c68ed2d2f1b6730f2e99 83 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 83 1.5E-19 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 MSIP34_RS08775 a9b4681fb957c68ed2d2f1b6730f2e99 83 PANTHER PTHR33359 1 83 7.8E-23 T 23-04-2016 MSIP34_RS08775 a9b4681fb957c68ed2d2f1b6730f2e99 83 Pfam PF02597 ThiS family 5 83 3.5E-20 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 SUPERFAMILY SSF52935 322 473 1.08E-37 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 Pfam PF00224 Pyruvate kinase, barrel domain 4 337 2.2E-121 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 Gene3D G3DSA:3.40.1380.20 326 469 2.6E-37 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PANTHER PTHR11817:SF17 1 474 1.2E-242 T 23-04-2016 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 Gene3D G3DSA:3.20.20.60 168 325 2.8E-97 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 Gene3D G3DSA:3.20.20.60 4 74 2.8E-97 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 472 9.2E-162 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 312 328 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 61 77 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 268 292 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 243 267 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 216 242 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PRINTS PR01050 Pyruvate kinase family signature 293 311 4.3E-58 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 PANTHER PTHR11817 1 474 1.2E-242 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 Gene3D G3DSA:2.40.33.10 75 164 1.2E-26 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 SUPERFAMILY SSF51621 167 339 2.06E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 SUPERFAMILY SSF51621 2 77 2.06E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 SUPERFAMILY SSF50800 72 163 8.02E-25 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 470 5.5E-28 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02475 442ee46cef8a69d0a82c9cce521d5cc1 478 ProSitePatterns PS00110 Pyruvate kinase active site signature. 214 226 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 Pfam PF02049 Flagellar hook-basal body complex protein FliE 32 117 9.4E-33 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 81 97 1.3E-16 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 46 62 1.3E-16 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 102 115 1.3E-16 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 23 117 2.7E-27 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 PANTHER PTHR34653 3 117 3.0E-27 T 23-04-2016 MSIP34_RS03860 63d84e6d33da9ad53b9c96eed1d337c7 117 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 9 117 19.201 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 Gene3D G3DSA:3.20.20.70 58 320 7.9E-73 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 SMART SM00729 90 295 3.3E-13 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 SUPERFAMILY SSF102114 57 322 9.68E-70 T 23-04-2016 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 PIRSF PIRSF005963 4 325 5.5E-132 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 Hamap MF_00206 Lipoyl synthase [lipA]. 1 326 153.313 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 TIGRFAM TIGR00510 lipA: lipoyl synthase 40 320 2.5E-138 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 Pfam PF04055 Radical SAM superfamily 97 257 1.2E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 PANTHER PTHR10949 40 320 4.0E-170 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS12790 6a0229e216f05b9ddd97754976cd97b5 326 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 42 79 6.1E-10 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 MSIP34_RS09655 5d8757e9fee854cf539050895ce9c192 345 PANTHER PTHR30160 44 311 2.2E-41 T 23-04-2016 MSIP34_RS09655 5d8757e9fee854cf539050895ce9c192 345 Gene3D G3DSA:3.40.50.2000 196 338 5.2E-34 T 23-04-2016 MSIP34_RS09655 5d8757e9fee854cf539050895ce9c192 345 SUPERFAMILY SSF53756 45 339 8.79E-70 T 23-04-2016 MSIP34_RS09655 5d8757e9fee854cf539050895ce9c192 345 PANTHER PTHR30160:SF1 44 311 2.2E-41 T 23-04-2016 MSIP34_RS09655 5d8757e9fee854cf539050895ce9c192 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 117 325 2.9E-28 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS09655 5d8757e9fee854cf539050895ce9c192 345 Gene3D G3DSA:3.40.50.2000 45 170 1.5E-26 T 23-04-2016 MSIP34_RS04455 dcb1ff755f434d4b300312d57d493471 127 PANTHER PTHR21192:SF3 10 122 1.2E-28 T 23-04-2016 MSIP34_RS04455 dcb1ff755f434d4b300312d57d493471 127 PANTHER PTHR21192 10 122 1.2E-28 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein MSIP34_RS04455 dcb1ff755f434d4b300312d57d493471 127 SUPERFAMILY SSF64076 1 122 2.09E-37 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein MSIP34_RS04455 dcb1ff755f434d4b300312d57d493471 127 Gene3D G3DSA:3.40.1230.10 1 122 3.4E-43 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein MSIP34_RS04455 dcb1ff755f434d4b300312d57d493471 127 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 2.0E-31 T 23-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein MSIP34_RS08245 273b4f7fcfe6c3735597a08177135dd1 139 ProSitePatterns PS00018 EF-hand calcium-binding domain. 49 61 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS08245 273b4f7fcfe6c3735597a08177135dd1 139 Gene3D G3DSA:1.10.238.10 48 85 5.6E-4 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 Gene3D G3DSA:3.40.50.2000 5 150 4.5E-46 T 23-04-2016 MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 SUPERFAMILY SSF53756 5 336 2.51E-91 T 23-04-2016 MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 5 336 3.1E-133 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 Gene3D G3DSA:3.40.50.2000 169 336 3.1E-56 T 23-04-2016 MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 PANTHER PTHR30160:SF7 3 336 2.9E-80 T 23-04-2016 MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 320 1.6E-67 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS09570 659d92c34d808b0d7d6572031bfe1723 338 PANTHER PTHR30160 3 336 2.9E-80 T 23-04-2016 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 SUPERFAMILY SSF55874 576 722 5.89E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 PANTHER PTHR33525 22 291 1.2E-49 T 23-04-2016 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 Gene3D G3DSA:1.10.3150.10 23 278 2.2E-64 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 SMART SM00387 614 725 1.3E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 Pfam PF08668 HDOD domain 25 219 2.6E-50 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 Gene3D G3DSA:3.30.565.10 573 724 3.4E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 656 670 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 704 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 722 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 684 8.1E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 SMART SM00471 116 253 2.6E-4 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 724 2.5E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 SUPERFAMILY SSF109604 22 271 1.01E-55 T 23-04-2016 MSIP34_RS02120 703786b53a41f9f81db7c938c50460b0 734 PANTHER PTHR33525:SF3 22 291 1.2E-49 T 23-04-2016 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 PANTHER PTHR30093 13 144 2.7E-51 T 23-04-2016 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 13 33 5.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 34 9.7E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 6.3E-16 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 6.3E-16 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 SUPERFAMILY SSF54523 42 144 4.24E-37 T 23-04-2016 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 14 144 4.1E-54 T 23-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 Pfam PF08334 Type II secretion system (T2SS), protein G 39 144 3.4E-44 T 23-04-2016 IPR013545 Type II secretion system protein G MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 PANTHER PTHR30093:SF9 13 144 2.7E-51 T 23-04-2016 MSIP34_RS04325 bb0403410dfd2f9be5dbefe656dabfdb 144 Gene3D G3DSA:3.30.700.10 16 99 4.1E-10 T 23-04-2016 MSIP34_RS04445 605a3d6223454384862c91ba59fa03ef 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 3.5E-96 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 MSIP34_RS04445 605a3d6223454384862c91ba59fa03ef 171 Gene3D G3DSA:3.10.129.10 2 167 2.5E-58 T 23-04-2016 IPR029069 HotDog domain MSIP34_RS04445 605a3d6223454384862c91ba59fa03ef 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 52.026 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 MSIP34_RS04445 605a3d6223454384862c91ba59fa03ef 171 SUPERFAMILY SSF54637 2 168 1.12E-57 T 23-04-2016 IPR029069 HotDog domain MSIP34_RS04445 605a3d6223454384862c91ba59fa03ef 171 Pfam PF07977 FabA-like domain 28 157 7.3E-51 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 MSIP34_RS07915 645ded8e32b1b31feba98242dce1f6ca 164 PANTHER PTHR37302 2 164 1.2E-28 T 23-04-2016 MSIP34_RS07915 645ded8e32b1b31feba98242dce1f6ca 164 SUPERFAMILY SSF109854 5 143 5.86E-30 T 23-04-2016 MSIP34_RS07915 645ded8e32b1b31feba98242dce1f6ca 164 Gene3D G3DSA:1.20.120.450 5 161 2.5E-32 T 23-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase MSIP34_RS07915 645ded8e32b1b31feba98242dce1f6ca 164 Pfam PF05163 DinB family 1 162 7.6E-29 T 23-04-2016 IPR007837 DNA damage-inducible protein DinB MSIP34_RS07915 645ded8e32b1b31feba98242dce1f6ca 164 PANTHER PTHR37302:SF2 2 164 1.2E-28 T 23-04-2016 MSIP34_RS10425 96ecf9c217910f00b06536d06927b9a4 255 Pfam PF02384 N-6 DNA Methylase 105 247 1.2E-11 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 MSIP34_RS10425 96ecf9c217910f00b06536d06927b9a4 255 SUPERFAMILY SSF53335 27 214 1.69E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS10425 96ecf9c217910f00b06536d06927b9a4 255 Gene3D G3DSA:3.40.50.150 110 195 7.6E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13720 811be9cfe06281e1a22060e072e8be8c 306 Pfam PF04381 Putative exonuclease, RdgC 1 294 3.8E-113 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 MSIP34_RS13720 811be9cfe06281e1a22060e072e8be8c 306 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 296 34.602 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 MSIP34_RS13720 811be9cfe06281e1a22060e072e8be8c 306 PANTHER PTHR38103 2 299 2.6E-75 T 23-04-2016 MSIP34_RS13720 811be9cfe06281e1a22060e072e8be8c 306 PANTHER PTHR38103:SF1 2 299 2.6E-75 T 23-04-2016 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 PIRSF PIRSF001430 1 256 3.8E-76 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 Pfam PF01416 tRNA pseudouridine synthase 142 244 3.3E-29 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 Pfam PF01416 tRNA pseudouridine synthase 8 103 5.1E-10 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 SUPERFAMILY SSF55120 1 253 4.46E-88 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 Gene3D G3DSA:3.30.70.660 106 241 8.9E-47 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 2.0E-69 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 PANTHER PTHR11142 1 245 4.3E-89 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 Gene3D G3DSA:3.30.70.580 2 104 7.1E-36 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07875 d35ad4ddda3781f125f9ece254a7397e 261 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.715 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 9 260 3.7E-69 T 23-04-2016 MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 9 262 7.1E-76 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 255 3.6E-23 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 SUPERFAMILY SSF56219 9 262 8.9E-74 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 35 44 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 Gene3D G3DSA:3.60.10.10 8 263 8.6E-92 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS12710 1452e43d39f681fa1bdc06b20cf89d74 264 PANTHER PTHR22748 9 264 2.5E-100 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 Gene3D G3DSA:1.10.3660.10 187 277 5.9E-4 T 23-04-2016 MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 PANTHER PTHR21363:SF0 3 288 1.2E-68 T 23-04-2016 MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 PANTHER PTHR21363 3 288 1.2E-68 T 23-04-2016 MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 Gene3D G3DSA:3.40.50.720 2 180 1.9E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 SUPERFAMILY SSF48179 175 282 2.04E-34 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 Pfam PF02153 Prephenate dehydrogenase 16 272 6.0E-77 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 MSIP34_RS05655 8a6a00c09b9fa95d2d82919580377555 288 SUPERFAMILY SSF51735 3 170 4.23E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 SUPERFAMILY SSF109635 9 98 7.72E-33 T 23-04-2016 MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 PANTHER PTHR33823 1 137 8.4E-54 T 23-04-2016 MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 17 139 28.938 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 21 129 8.5E-51 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 103 127 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 SUPERFAMILY SSF57716 100 138 6.27E-10 T 23-04-2016 MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 100 129 9.9E-12 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 MSIP34_RS00400 70e5f73b0cf4af5a81fad44f56dbd4a0 140 PANTHER PTHR33823:SF2 1 137 8.4E-54 T 23-04-2016 MSIP34_RS00650 96662679b32e68e418aaa868d2eb57c3 353 PANTHER PTHR30011:SF1 50 344 2.6E-32 T 23-04-2016 MSIP34_RS00650 96662679b32e68e418aaa868d2eb57c3 353 Gene3D G3DSA:3.20.20.30 40 345 3.3E-53 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS00650 96662679b32e68e418aaa868d2eb57c3 353 Pfam PF00296 Luciferase-like monooxygenase 42 317 3.8E-38 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS00650 96662679b32e68e418aaa868d2eb57c3 353 PANTHER PTHR30011 50 344 2.6E-32 T 23-04-2016 MSIP34_RS00650 96662679b32e68e418aaa868d2eb57c3 353 SUPERFAMILY SSF51679 39 344 1.91E-46 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS02510 88d27d36b1df5449e037f8505f3fb6a8 270 Pfam PF01061 ABC-2 type transporter 33 224 2.1E-10 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 MSIP34_RS02510 88d27d36b1df5449e037f8505f3fb6a8 270 PANTHER PTHR30294:SF21 1 267 1.6E-39 T 23-04-2016 MSIP34_RS02510 88d27d36b1df5449e037f8505f3fb6a8 270 PANTHER PTHR30294 1 267 1.6E-39 T 23-04-2016 MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 PANTHER PTHR10000:SF7 70 280 3.0E-78 T 23-04-2016 MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 SUPERFAMILY SSF56784 59 277 2.03E-49 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 Pfam PF12710 haloacid dehalogenase-like hydrolase 76 244 1.6E-19 T 23-04-2016 MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 64 276 2.6E-72 T 23-04-2016 MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 PANTHER PTHR10000 70 280 3.0E-78 T 23-04-2016 MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 75 246 8.2E-33 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 Gene3D G3DSA:3.40.50.1000 136 266 2.5E-37 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS04610 8f3458d3e54a3cd801c9b25f2f49c5cc 280 Gene3D G3DSA:1.10.150.210 85 135 4.4E-25 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 SMART SM00155 146 173 0.27 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 SMART SM00155 375 402 3.0E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 Pfam PF00614 Phospholipase D Active site motif 148 168 2.6E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 SUPERFAMILY SSF56024 274 442 9.42E-23 T 23-04-2016 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 Gene3D G3DSA:3.30.870.10 29 237 1.5E-25 T 23-04-2016 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 Gene3D G3DSA:3.30.870.10 284 441 4.9E-17 T 23-04-2016 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 PANTHER PTHR12677 260 718 5.4E-23 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 Pfam PF13091 PLD-like domain 286 421 7.4E-12 T 23-04-2016 IPR025202 Phospholipase D-like domain MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 Pfam PF09335 SNARE associated Golgi protein 573 689 4.7E-24 T 23-04-2016 IPR032816 SNARE associated Golgi protein MSIP34_RS06775 9d034a47cb31efca3098ce6f0a7a28ee 732 SUPERFAMILY SSF56024 27 243 5.89E-28 T 23-04-2016 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 PANTHER PTHR13343:SF4 1 234 2.2E-50 T 23-04-2016 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 Pfam PF10615 Protein of unknown function (DUF2470) 155 231 3.8E-20 T 23-04-2016 IPR019595 Domain of unknown function DUF2470 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 Gene3D G3DSA:2.30.110.10 3 144 2.8E-51 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 6 138 9.2E-13 T 23-04-2016 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 PANTHER PTHR13343 1 234 2.2E-50 T 23-04-2016 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 SUPERFAMILY SSF50475 3 235 2.24E-53 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS05035 242fd52910340de1f5dd2f3b4be9ade7 237 Gene3D G3DSA:3.20.180.10 150 236 8.1E-29 T 23-04-2016 IPR019595 Domain of unknown function DUF2470 MSIP34_RS07600 e21181dd061fa45af17ea26c52750bf1 352 SUPERFAMILY SSF53067 120 172 1.41E-6 T 23-04-2016 MSIP34_RS07600 e21181dd061fa45af17ea26c52750bf1 352 SUPERFAMILY SSF53067 10 83 1.41E-6 T 23-04-2016 MSIP34_RS07600 e21181dd061fa45af17ea26c52750bf1 352 Pfam PF01968 Hydantoinase/oxoprolinase 69 318 2.9E-12 T 23-04-2016 IPR002821 Hydantoinase/oxoprolinase GO:0016787 MSIP34_RS07600 e21181dd061fa45af17ea26c52750bf1 352 TIGRFAM TIGR03123 one_C_unchar_1: probable H4MPT-linked C1 transfer pathway protein 12 348 3.5E-99 T 23-04-2016 IPR002756 4-[[4-(2-aminoethyl)phenoxy]-methyl]-2-furanmethanamine-glutamate synthase UniPathway: UPA00080 MSIP34_RS07600 e21181dd061fa45af17ea26c52750bf1 352 Gene3D G3DSA:3.30.420.190 130 351 1.8E-77 T 23-04-2016 MSIP34_RS07600 e21181dd061fa45af17ea26c52750bf1 352 Gene3D G3DSA:3.30.420.40 11 129 6.2E-34 T 23-04-2016 MSIP34_RS00200 5fe13c0ab1d4ebb5a6f707b0b5a79a16 712 Pfam PF03170 Bacterial cellulose synthase subunit 19 605 6.5E-129 T 23-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 MSIP34_RS00200 5fe13c0ab1d4ebb5a6f707b0b5a79a16 712 PANTHER PTHR39083:SF1 1 712 1.3E-48 T 23-04-2016 MSIP34_RS00200 5fe13c0ab1d4ebb5a6f707b0b5a79a16 712 PRINTS PR01440 Cellulose synthase subunit B signature 270 291 2.6E-8 T 23-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 MSIP34_RS00200 5fe13c0ab1d4ebb5a6f707b0b5a79a16 712 PRINTS PR01440 Cellulose synthase subunit B signature 501 521 2.6E-8 T 23-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 MSIP34_RS00200 5fe13c0ab1d4ebb5a6f707b0b5a79a16 712 PRINTS PR01440 Cellulose synthase subunit B signature 465 484 2.6E-8 T 23-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 MSIP34_RS00200 5fe13c0ab1d4ebb5a6f707b0b5a79a16 712 PANTHER PTHR39083 1 712 1.3E-48 T 23-04-2016 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Gene3D G3DSA:2.150.10.10 318 536 1.3E-31 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 PANTHER PTHR36921 42 349 9.4E-14 T 23-04-2016 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 SUPERFAMILY SSF51120 196 348 2.22E-19 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 428 446 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 437 455 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 410 428 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 401 419 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 300 318 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 309 327 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF08548 Peptidase M10 serralysin C terminal 194 330 3.4E-11 T 23-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00413 Matrixin 40 135 6.2E-9 T 23-04-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Gene3D G3DSA:3.40.390.10 28 193 7.2E-32 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 SUPERFAMILY SSF51120 322 525 1.96E-26 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 SUPERFAMILY SSF55486 27 192 1.54E-36 T 23-04-2016 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 SMART SM00235 3 171 1.5E-6 T 23-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 277 293 17.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 423 439 0.1 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 395 412 0.026 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 378 394 48.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 440 457 0.0025 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 294 311 0.016 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 313 328 2.9 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 PRINTS PR00313 NodO calcium binding signature 450 459 3.2E-12 T 23-04-2016 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 PRINTS PR00313 NodO calcium binding signature 432 440 3.2E-12 T 23-04-2016 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 PRINTS PR00313 NodO calcium binding signature 393 404 3.2E-12 T 23-04-2016 MSIP34_RS13915 84cc304c3d7378aa744ef062a8bda458 559 PRINTS PR00313 NodO calcium binding signature 441 449 3.2E-12 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 ProSitePatterns PS00543 HlyD family secretion proteins signature. 402 424 - T 23-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PANTHER PTHR30386:SF4 151 439 5.4E-101 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PANTHER PTHR30386:SF4 17 122 5.4E-101 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 Pfam PF13437 HlyD family secretion protein 292 394 2.4E-17 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 28 437 2.9E-107 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 Gene3D G3DSA:2.40.50.100 71 101 6.8E-17 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 Gene3D G3DSA:2.40.50.100 289 324 6.8E-17 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 402 417 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 437 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 361 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 37 60 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 384 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 304 325 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 79 99 1.3E-39 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PANTHER PTHR30386 151 439 5.4E-101 T 23-04-2016 MSIP34_RS10035 d0bf566986f53ce5719471d46a09c8b8 439 PANTHER PTHR30386 17 122 5.4E-101 T 23-04-2016 MSIP34_RS01975 768551b7ac71f193de7a93cd1d4ae5ff 86 Pfam PF03692 Putative zinc- or iron-chelating domain 2 55 5.6E-5 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein MSIP34_RS01975 768551b7ac71f193de7a93cd1d4ae5ff 86 PANTHER PTHR36931 1 84 6.4E-35 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 532 549 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 3.1E-50 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82714 182 264 3.53E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:1.10.3850.10 790 1010 7.2E-55 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82866 782 1013 5.75E-46 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:3.30.70.1430 40 138 2.6E-22 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82693 267 316 9.16E-9 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82693 138 181 9.16E-9 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:3.30.70.1430 550 646 1.7E-10 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Pfam PF00873 AcrB/AcrD/AcrF family 3 1008 5.4E-223 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:3.30.2090.10 695 785 2.6E-11 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:3.30.2090.10 182 264 4.1E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82866 296 489 1.96E-45 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:3.30.70.1320 269 299 2.6E-6 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:3.30.70.1320 139 178 2.6E-6 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 Gene3D G3DSA:1.20.1640.10 300 495 1.1E-54 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PANTHER PTHR32063 1 1027 0.0 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82693 40 133 9.68E-19 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82693 546 646 8.89E-12 T 23-04-2016 MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 SUPERFAMILY SSF82714 696 784 6.41E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS09875 dcafe4d67ab1ef93d9195f5616b6fdaa 1027 PANTHER PTHR32063:SF20 1 1027 0.0 T 23-04-2016 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 141 8.5E-45 T 23-04-2016 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 392 8.5E-99 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 328 4.0E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 4.0E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 339 351 4.0E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 287 301 4.0E-6 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 SMART SM00382 209 390 3.8E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 Gene3D G3DSA:3.40.50.300 189 387 8.3E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 Gene3D G3DSA:3.30.230.10 5 168 1.9E-28 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 PANTHER PTHR32039 1 495 4.4E-249 T 23-04-2016 MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 SUPERFAMILY SSF54211 10 169 4.93E-32 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 492 4.1E-193 T 23-04-2016 IPR004482 Mg chelatase-related protein MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 492 8.0E-30 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 PANTHER PTHR32039:SF7 1 495 4.4E-249 T 23-04-2016 IPR004482 Mg chelatase-related protein MSIP34_RS12980 5abfec905c6332fa7ce35abc9552923e 496 SUPERFAMILY SSF52540 189 495 9.02E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04025 0772910ab53a388d897be2cbbca08e6f 275 Gene3D G3DSA:3.40.50.300 21 258 3.5E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04025 0772910ab53a388d897be2cbbca08e6f 275 SUPERFAMILY SSF52540 21 258 1.88E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04025 0772910ab53a388d897be2cbbca08e6f 275 PANTHER PTHR13696 5 270 1.3E-12 T 23-04-2016 MSIP34_RS04025 0772910ab53a388d897be2cbbca08e6f 275 PANTHER PTHR13696:SF3 5 270 1.3E-12 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 9 652 52.535 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 SUPERFAMILY SSF56801 21 649 1.06E-176 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 536 617 5.0E-27 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Gene3D G3DSA:2.30.38.10 443 521 3.3E-10 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 265 276 - T 23-04-2016 IPR020845 AMP-binding, conserved site MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Gene3D G3DSA:3.40.50.980 85 270 3.1E-44 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 27 650 2.6E-302 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 PANTHER PTHR24095 10 648 2.0E-277 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Gene3D G3DSA:3.40.50.980 271 431 3.3E-29 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Gene3D G3DSA:3.30.300.30 522 630 1.2E-26 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 87 6.7E-20 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 PANTHER PTHR24095:SF178 10 648 2.0E-277 T 23-04-2016 MSIP34_RS08020 abee7322cf859891b36a239543f1c0bd 653 Pfam PF00501 AMP-binding enzyme 89 527 5.1E-93 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 PANTHER PTHR34298 3 184 5.4E-65 T 23-04-2016 MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 Gene3D G3DSA:1.10.10.10 5 83 1.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 Pfam PF04079 Segregation and condensation complex subunit ScpB 13 170 7.1E-51 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 180 5.0E-35 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 SUPERFAMILY SSF46785 87 162 7.35E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 PANTHER PTHR34298:SF2 3 184 5.4E-65 T 23-04-2016 MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 SUPERFAMILY SSF46785 5 83 1.74E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 Gene3D G3DSA:1.10.10.10 86 162 8.2E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04710 3963bc4dfa722cfcb6c42f24e2a74fca 187 PIRSF PIRSF019345 1 183 3.1E-56 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 MSIP34_RS10790 94f6d4c6539e7190d37e2be53d96d460 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 178 1.9E-63 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS10790 94f6d4c6539e7190d37e2be53d96d460 183 Gene3D G3DSA:1.20.1200.10 18 181 1.2E-66 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 MSIP34_RS10790 94f6d4c6539e7190d37e2be53d96d460 183 Pfam PF01923 Cobalamin adenosyltransferase 8 165 2.9E-59 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 MSIP34_RS10790 94f6d4c6539e7190d37e2be53d96d460 183 SUPERFAMILY SSF89028 7 178 1.29E-63 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 MSIP34_RS10790 94f6d4c6539e7190d37e2be53d96d460 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 178 6.0E-51 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS10790 94f6d4c6539e7190d37e2be53d96d460 183 PANTHER PTHR12213 4 181 2.2E-74 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 Gene3D G3DSA:3.30.70.20 278 330 8.4E-9 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 269 280 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 Gene3D G3DSA:1.10.1060.10 213 277 6.0E-8 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 PANTHER PTHR24960:SF45 1 245 2.9E-98 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 PANTHER PTHR24960:SF45 261 395 2.9E-98 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 SUPERFAMILY SSF54862 95 117 6.7E-26 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 SUPERFAMILY SSF54862 269 350 6.7E-26 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 SUPERFAMILY SSF54862 159 241 6.7E-26 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 Pfam PF13746 4Fe-4S dicluster domain 209 322 6.7E-53 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 473 2.7E-22 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 PANTHER PTHR24960 1 245 2.9E-98 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 PANTHER PTHR24960 261 395 2.9E-98 T 23-04-2016 MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 Gene3D G3DSA:2.60.40.10 357 472 1.5E-23 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 Pfam PF12801 4Fe-4S binding domain 85 121 1.6E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS10755 123f9c2efdea6680aa6ecb100ef2ed8f 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 27 456 2.5E-132 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 Pfam PF16360 GTP-binding GTPase Middle Region 10 58 5.0E-11 T 23-04-2016 IPR032305 GTP-binding protein, middle domain MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 PANTHER PTHR10229 11 99 2.0E-31 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 SUPERFAMILY SSF52540 66 99 2.17E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 99 4.4E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 67 87 4.4E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 Gene3D G3DSA:3.40.50.300 61 99 5.5E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 Pfam PF01926 50S ribosome-binding GTPase 67 99 1.3E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS14580 f9b38dabbedead0fc85ff5e0e7f0b33d 99 PANTHER PTHR10229:SF0 11 99 2.0E-31 T 23-04-2016 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 Gene3D G3DSA:1.25.40.10 897 926 2.0E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 Gene3D G3DSA:1.25.40.10 719 788 2.0E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 SUPERFAMILY SSF48452 707 944 1.71E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 Gene3D G3DSA:1.25.40.10 799 862 7.8E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 91 253 3.9E-33 T 23-04-2016 IPR024618 Domain of unknown function DUF3857 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 SMART SM00028 722 755 1.2E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 SMART SM00028 898 931 2.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 Pfam PF01841 Transglutaminase-like superfamily 304 410 5.9E-7 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS12170 9fabe9b5227a9acacc24553f39c8732f 958 SUPERFAMILY SSF54001 286 421 1.67E-14 T 23-04-2016 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 6.5E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 6.5E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 6.5E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 6.5E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 PANTHER PTHR19370:SF98 4 257 7.2E-122 T 23-04-2016 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 Gene3D G3DSA:3.40.50.80 98 257 2.6E-44 T 23-04-2016 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 PANTHER PTHR19370 4 257 7.2E-122 T 23-04-2016 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 SUPERFAMILY SSF63380 5 99 1.18E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 Gene3D G3DSA:2.40.30.10 4 97 3.8E-31 T 23-04-2016 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 Pfam PF00970 Oxidoreductase FAD-binding domain 16 91 4.9E-9 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 SUPERFAMILY SSF52343 103 255 8.64E-41 T 23-04-2016 MSIP34_RS09750 b0d24955272e383531e222a4e5bf06b3 258 Pfam PF00175 Oxidoreductase NAD-binding domain 112 229 9.9E-9 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 71 168 1.2E-9 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 PANTHER PTHR30258:SF13 70 590 1.2E-260 T 23-04-2016 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 SUPERFAMILY SSF52540 204 588 2.95E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 Pfam PF00437 Type II/IV secretion system protein 221 481 1.5E-71 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 409 423 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 Gene3D G3DSA:3.30.450.90 190 313 1.4E-43 T 23-04-2016 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 SMART SM00382 342 445 5.7E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 PANTHER PTHR30258 70 590 1.2E-260 T 23-04-2016 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 SUPERFAMILY SSF160246 19 166 1.36E-13 T 23-04-2016 MSIP34_RS03100 d924bde1eb7483c3312173dfe1bf606a 593 Gene3D G3DSA:3.40.50.300 319 589 3.0E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 PANTHER PTHR11615:SF114 50 253 4.9E-260 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 PANTHER PTHR11615:SF114 272 765 4.9E-260 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 Pfam PF01568 Molydopterin dinucleotide binding domain 649 757 6.7E-9 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 PIRSF PIRSF000144 1 767 0.0 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 Gene3D G3DSA:3.40.228.10 184 395 4.5E-59 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 Gene3D G3DSA:3.40.50.740 110 183 2.9E-51 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 Gene3D G3DSA:3.40.50.740 396 626 2.9E-51 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 SUPERFAMILY SSF53706 49 631 2.75E-151 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 SUPERFAMILY SSF50692 643 764 1.08E-16 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 Gene3D G3DSA:2.40.40.20 647 762 4.8E-10 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 PANTHER PTHR11615 50 253 4.9E-260 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 PANTHER PTHR11615 272 765 4.9E-260 T 23-04-2016 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 5.2E-288 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 MSIP34_RS08120 5fc2a4301b16a61ed885e5a330f47c5b 767 Pfam PF00384 Molybdopterin oxidoreductase 110 498 5.0E-27 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 SUPERFAMILY SSF54211 250 264 4.17E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 SUPERFAMILY SSF54211 298 449 4.17E-41 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PANTHER PTHR32472 1 449 2.2E-207 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 SUPERFAMILY SSF52540 65 285 8.45E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 425 5.7E-9 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 446 1.2E-194 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 Gene3D G3DSA:3.30.230.10 279 448 4.4E-36 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 SMART SM00382 86 240 6.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 Gene3D G3DSA:3.40.50.300 55 272 2.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 317 340 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 10 34 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 208 236 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 119 136 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 78 106 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 243 269 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 PRINTS PR01874 DNA repair protein radA signature 169 193 5.6E-95 T 23-04-2016 MSIP34_RS07255 628fbdd1afdd87f65ec1076a2bd29a67 452 Pfam PF13481 AAA domain 76 217 2.4E-15 T 23-04-2016 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Pfam PF04898 Glutamate synthase central domain 484 770 2.2E-109 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 SUPERFAMILY SSF69336 1270 1548 3.4E-93 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 PANTHER PTHR11938 24 1551 0.0 T 23-04-2016 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Gene3D G3DSA:3.60.20.10 35 466 1.7E-188 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 PANTHER PTHR11938:SF1 24 1551 0.0 T 23-04-2016 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Gene3D G3DSA:2.160.20.60 1276 1556 1.7E-104 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Pfam PF00310 Glutamine amidotransferases class-II 35 457 5.3E-190 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 SUPERFAMILY SSF51395 478 1257 3.3E-260 T 23-04-2016 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Gene3D G3DSA:3.20.20.70 868 1266 4.5E-182 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 SUPERFAMILY SSF56235 35 460 8.68E-156 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Pfam PF01493 GXGXG motif 1301 1484 1.9E-81 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Gene3D G3DSA:3.20.20.70 476 821 1.8E-102 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS14050 34af0ec005bdb62e14c6115353947d66 1558 Pfam PF01645 Conserved region in glutamate synthase 831 1221 3.7E-156 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 SUPERFAMILY SSF56059 102 324 2.47E-67 T 23-04-2016 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Gene3D G3DSA:3.30.470.20 189 326 1.5E-61 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 SMART SM01209 101 294 3.2E-141 T 23-04-2016 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Gene3D G3DSA:3.40.50.20 2 93 6.6E-35 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Gene3D G3DSA:3.30.1490.20 119 188 1.8E-33 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 SUPERFAMILY SSF51246 327 420 1.57E-30 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Gene3D G3DSA:3.90.600.10 329 419 5.0E-34 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 PANTHER PTHR10520 1 421 2.1E-265 T 23-04-2016 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 SMART SM01210 328 420 3.4E-51 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 4.7E-35 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 3.5E-170 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 2.7E-79 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 42.64 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 SUPERFAMILY SSF52440 1 101 2.01E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS01950 ddd49df28c4fc087771a0e0118e8f64a 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 1.4E-28 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 319 325 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 Gene3D G3DSA:3.40.50.1000 455 575 1.5E-35 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PANTHER PTHR24093:SF49 9 599 0.0 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PANTHER PTHR24093:SF49 637 690 0.0 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 SUPERFAMILY SSF56784 389 571 1.18E-37 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 SUPERFAMILY SSF56784 305 329 1.18E-37 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 Pfam PF00702 haloacid dehalogenase-like hydrolase 313 542 6.1E-32 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 346 2.7E-32 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 384 613 4.6E-47 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 SUPERFAMILY SSF81665 577 583 6.02E-11 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 SUPERFAMILY SSF81665 214 311 6.02E-11 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 SUPERFAMILY SSF81665 74 109 6.02E-11 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 5 688 0.0 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 SUPERFAMILY SSF81653 120 213 1.57E-19 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 Gene3D G3DSA:3.40.1110.10 328 454 1.1E-52 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 Pfam PF00122 E1-E2 ATPase 78 308 2.2E-37 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 9 691 40.41 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PANTHER PTHR24093 9 599 0.0 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PANTHER PTHR24093 637 690 0.0 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 Gene3D G3DSA:2.70.150.10 72 214 3.0E-22 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 317 331 8.6E-23 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 8.6E-23 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 563 8.6E-23 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 547 8.6E-23 T 23-04-2016 MSIP34_RS05410 450200b0695dfe77c43c1ab6f39595f1 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 485 8.6E-23 T 23-04-2016 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 PIRSF PIRSF000903 1 271 1.6E-109 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 Pfam PF00149 Calcineurin-like phosphoesterase 4 152 7.8E-11 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 PANTHER PTHR24032 1 261 1.6E-103 T 23-04-2016 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 PANTHER PTHR24032:SF27 1 261 1.6E-103 T 23-04-2016 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 SUPERFAMILY SSF56300 1 256 2.69E-52 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 265 1.4E-83 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 45.819 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 Gene3D G3DSA:3.60.21.10 1 130 2.7E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS11425 bea9b303c4a6cea17f0893ef27e8ee63 284 Gene3D G3DSA:3.60.21.10 167 267 2.7E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 Gene3D G3DSA:3.40.190.10 93 179 1.3E-21 T 23-04-2016 MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 Pfam PF03466 LysR substrate binding domain 90 295 2.0E-40 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 Gene3D G3DSA:3.40.190.10 180 263 2.7E-16 T 23-04-2016 MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 PANTHER PTHR30537 1 299 1.0E-101 T 23-04-2016 MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.6E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 PANTHER PTHR30537:SF5 1 299 1.0E-101 T 23-04-2016 MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 SUPERFAMILY SSF46785 4 86 5.01E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 Gene3D G3DSA:1.10.10.10 4 84 1.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10600 a27c91fa0aee8ef6265dcb8363b0e1ba 305 SUPERFAMILY SSF53850 90 298 7.24E-43 T 23-04-2016 MSIP34_RS13845 2fbdd932e6f15333877c489bc750e184 300 PANTHER PTHR10584 5 285 4.0E-41 T 23-04-2016 MSIP34_RS13845 2fbdd932e6f15333877c489bc750e184 300 Gene3D G3DSA:3.40.1190.20 5 285 1.4E-49 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS13845 2fbdd932e6f15333877c489bc750e184 300 Pfam PF00294 pfkB family carbohydrate kinase 22 284 1.1E-33 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB MSIP34_RS13845 2fbdd932e6f15333877c489bc750e184 300 SUPERFAMILY SSF53613 5 285 9.98E-51 T 23-04-2016 IPR029056 Ribokinase-like MSIP34_RS13845 2fbdd932e6f15333877c489bc750e184 300 PANTHER PTHR10584:SF188 5 285 4.0E-41 T 23-04-2016 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 Pfam PF00909 Ammonium Transporter Family 77 477 7.8E-117 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 PANTHER PTHR11730 47 479 9.6E-174 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 PANTHER PTHR11730:SF17 47 479 9.6E-174 T 23-04-2016 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 TIGRFAM TIGR00836 amt: ammonium transporter 76 477 4.5E-130 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 ProSitePatterns PS01219 Ammonium transporters signature. 233 258 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 SUPERFAMILY SSF111352 71 457 1.7E-125 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MSIP34_RS13000 14955db83dae75d6853f32ba0a5c5502 479 Gene3D G3DSA:1.10.3430.10 70 457 1.4E-137 T 23-04-2016 IPR029020 Ammonium/urea transporter MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 Pfam PF00342 Phosphoglucose isomerase 49 543 6.0E-235 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 Gene3D G3DSA:1.10.1390.10 509 549 1.2E-18 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 526 42.042 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 SUPERFAMILY SSF53697 3 548 4.73E-221 T 23-04-2016 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 499 516 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PANTHER PTHR11469 1 551 0.0 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 Gene3D G3DSA:3.40.50.10490 291 508 9.7E-141 T 23-04-2016 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 Gene3D G3DSA:3.40.50.10490 7 95 9.7E-141 T 23-04-2016 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PANTHER PTHR11469:SF4 1 551 0.0 T 23-04-2016 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 2.0E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PRINTS PR00662 Glucose-6-phosphate isomerase signature 467 485 2.0E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 2.0E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 2.0E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PRINTS PR00662 Glucose-6-phosphate isomerase signature 485 499 2.0E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 PRINTS PR00662 Glucose-6-phosphate isomerase signature 499 512 2.0E-56 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS06470 654b028b2a9159ef92a983a17eb68d97 551 Gene3D G3DSA:3.40.50.10490 96 289 3.1E-91 T 23-04-2016 MSIP34_RS04145 c46d82b0896bc88b8c94899dcdde0c93 167 PANTHER PTHR22617 17 167 2.6E-48 T 23-04-2016 MSIP34_RS04145 c46d82b0896bc88b8c94899dcdde0c93 167 Pfam PF01584 CheW-like domain 20 155 7.1E-36 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS04145 c46d82b0896bc88b8c94899dcdde0c93 167 Gene3D G3DSA:2.40.50.180 58 95 2.2E-11 T 23-04-2016 MSIP34_RS04145 c46d82b0896bc88b8c94899dcdde0c93 167 Gene3D G3DSA:2.30.30.40 96 146 6.2E-7 T 23-04-2016 MSIP34_RS04145 c46d82b0896bc88b8c94899dcdde0c93 167 SUPERFAMILY SSF50341 17 158 3.14E-39 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS04145 c46d82b0896bc88b8c94899dcdde0c93 167 SMART SM00260 16 153 1.3E-37 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 Gene3D G3DSA:1.25.40.10 124 125 1.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 Gene3D G3DSA:1.25.40.10 13 77 1.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 Gene3D G3DSA:1.25.40.10 233 253 1.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 SUPERFAMILY SSF48452 13 81 1.64E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 SUPERFAMILY SSF110849 160 225 1.92E-8 T 23-04-2016 IPR003115 ParB/Sulfiredoxin MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 Gene3D G3DSA:3.40.50.150 394 573 2.2E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 SUPERFAMILY SSF53335 395 570 1.74E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 401 543 3.4E-11 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 Pfam PF05050 Methyltransferase FkbM domain 416 567 3.0E-10 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 PANTHER PTHR36973 399 592 1.3E-14 T 23-04-2016 MSIP34_RS13995 61314e1236a7403c78d148c77387f0c0 602 PANTHER PTHR36973:SF1 399 592 1.3E-14 T 23-04-2016 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 SUPERFAMILY SSF55174 8 100 7.33E-29 T 23-04-2016 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 PIRSF PIRSF016821 6 131 2.2E-45 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 SMART SM00363 9 67 1.3E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 Pfam PF01479 S4 domain 10 55 3.2E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 Gene3D G3DSA:3.10.290.10 7 101 2.8E-35 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 PANTHER PTHR11079 1 76 1.5E-18 T 23-04-2016 MSIP34_RS08760 e284361084116a57ddab24a0607614d0 132 PANTHER PTHR11079:SF70 1 76 1.5E-18 T 23-04-2016 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-39 T 23-04-2016 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 SMART SM01387 8 88 4.9E-53 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 Pfam PF00312 Ribosomal protein S15 9 88 2.2E-38 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 PANTHER PTHR23321 1 88 3.3E-43 T 23-04-2016 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 SUPERFAMILY SSF47060 3 89 4.71E-35 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 Gene3D G3DSA:1.10.287.10 3 89 1.2E-38 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.99 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00390 53ab616024c622a61afc7b24a0096948 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.5E-38 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 106 116 5.3E-5 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 145 157 5.3E-5 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 128 5.3E-5 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 SUPERFAMILY SSF46785 5 57 4.76E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 Pfam PF00717 Peptidase S24-like 109 174 4.6E-14 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 PANTHER PTHR33516 74 191 4.2E-34 T 23-04-2016 MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 PANTHER PTHR33516:SF1 74 191 4.2E-34 T 23-04-2016 MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 Gene3D G3DSA:1.10.10.10 9 57 2.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 SUPERFAMILY SSF51306 74 189 3.14E-30 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS10605 3a6d25a3159c7d7041edaea83acaa47e 192 Gene3D G3DSA:2.10.109.10 79 191 2.5E-35 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 Gene3D G3DSA:2.170.130.10 140 301 2.7E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 SMART SM00965 79 129 7.1E-6 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 Gene3D G3DSA:2.40.170.20 304 834 7.2E-105 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 PANTHER PTHR32552 175 834 1.4E-183 T 23-04-2016 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 PANTHER PTHR32552 77 145 1.4E-183 T 23-04-2016 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 Pfam PF00593 TonB dependent receptor 597 832 1.2E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 SUPERFAMILY SSF56935 179 834 4.76E-103 T 23-04-2016 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 PANTHER PTHR32552:SF14 175 834 1.4E-183 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 PANTHER PTHR32552:SF14 77 145 1.4E-183 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 Pfam PF07715 TonB-dependent Receptor Plug Domain 183 282 4.1E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04060 6adaeda2e3183856ab2a775516545e92 834 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 185 834 2.7E-109 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS11700 d65e31fe9c203c7000d520fcee031aa1 237 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 225 5.2E-67 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 MSIP34_RS11700 d65e31fe9c203c7000d520fcee031aa1 237 Gene3D G3DSA:1.10.3720.10 11 226 9.9E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS11700 d65e31fe9c203c7000d520fcee031aa1 237 PANTHER PTHR30183 3 234 2.8E-80 T 23-04-2016 MSIP34_RS11700 d65e31fe9c203c7000d520fcee031aa1 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 225 9.2E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS11700 d65e31fe9c203c7000d520fcee031aa1 237 SUPERFAMILY SSF161098 8 216 8.37E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.7E-31 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 SMART SM00411 1 90 9.9E-37 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 SUPERFAMILY SSF47729 1 90 3.68E-30 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 Gene3D G3DSA:4.10.520.10 1 90 7.5E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.0E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.0E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.0E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 MSIP34_RS07420 5ed2163eca7fefa44dfbfc42bd6ff5ac 90 PANTHER PTHR33175 1 90 8.7E-37 T 23-04-2016 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 SMART SM00347 37 137 6.3E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 7.2E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 7.2E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 7.2E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 SUPERFAMILY SSF46785 18 153 2.02E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 Gene3D G3DSA:1.10.10.10 13 153 3.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 PANTHER PTHR33164 25 152 1.5E-14 T 23-04-2016 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 Pfam PF12802 MarR family 42 101 3.1E-9 T 23-04-2016 MSIP34_RS13365 e599319b83828f0b81883501100da3ed 156 PANTHER PTHR33164:SF16 25 152 1.5E-14 T 23-04-2016 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 145 3.6E-26 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 SUPERFAMILY SSF50129 8 173 9.13E-49 T 23-04-2016 IPR011032 GroES-like MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 PANTHER PTHR11695:SF608 16 350 5.2E-163 T 23-04-2016 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 Pfam PF00107 Zinc-binding dehydrogenase 186 309 5.8E-24 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 Gene3D G3DSA:3.40.50.720 179 293 3.0E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 PANTHER PTHR11695 16 350 5.2E-163 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 SUPERFAMILY SSF51735 149 313 3.47E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 SMART SM00829 14 343 1.8E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MSIP34_RS02680 b6c8a76027788c59ae552db6f0cbf035 352 Gene3D G3DSA:3.90.180.10 6 178 1.6E-64 T 23-04-2016 IPR011032 GroES-like MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 SUPERFAMILY SSF53383 222 620 2.64E-120 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 226 620 1.8E-168 T 23-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 435 454 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 Pfam PF00266 Aminotransferase class-V 243 611 5.7E-142 T 23-04-2016 IPR000192 Aminotransferase class V domain MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 Gene3D G3DSA:3.40.640.10 254 502 1.8E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 PANTHER PTHR11601:SF17 223 618 1.5E-178 T 23-04-2016 MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 Gene3D G3DSA:3.90.1150.10 503 619 3.9E-24 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS10820 0e94f484a817c6b441174ce98827df23 623 PANTHER PTHR11601 223 618 1.5E-178 T 23-04-2016 MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 445 4.1E-82 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 PANTHER PTHR11061 12 457 1.6E-100 T 23-04-2016 MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 SUPERFAMILY SSF50249 11 64 1.54E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 Gene3D G3DSA:3.40.50.150 256 451 1.9E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 SUPERFAMILY SSF53335 67 452 4.84E-75 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 251 452 1.0E-14 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 9 453 67.595 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 PANTHER PTHR11061:SF30 12 457 1.6E-100 T 23-04-2016 MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 435 445 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site MSIP34_RS04900 a73c465dbf6a15e953fe5385340f7ba4 457 Gene3D G3DSA:2.40.50.140 12 78 2.3E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 Pfam PF00072 Response regulator receiver domain 9 118 3.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 Gene3D G3DSA:3.40.50.2300 5 120 2.4E-31 T 23-04-2016 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 SUPERFAMILY SSF52172 7 129 6.55E-31 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 SMART SM00448 6 117 1.7E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 PANTHER PTHR26402 6 119 8.2E-33 T 23-04-2016 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 PANTHER PTHR26402:SF524 6 119 8.2E-33 T 23-04-2016 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 Pfam PF04397 LytTr DNA-binding domain 148 244 2.4E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 SMART SM00850 147 246 1.0E-21 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 MSIP34_RS00175 4762d862064f9b2cbc1a6523e6fcf06b 246 Gene3D G3DSA:2.40.50.40 139 205 1.8E-14 T 23-04-2016 MSIP34_RS01740 ba7f99755f06e15968be14ea1385860b 78 Pfam PF00830 Ribosomal L28 family 3 62 1.0E-28 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 MSIP34_RS01740 ba7f99755f06e15968be14ea1385860b 78 PANTHER PTHR13528 1 69 1.6E-36 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 MSIP34_RS01740 ba7f99755f06e15968be14ea1385860b 78 SUPERFAMILY SSF143800 2 77 8.63E-32 T 23-04-2016 MSIP34_RS01740 ba7f99755f06e15968be14ea1385860b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 5.8E-28 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01740 ba7f99755f06e15968be14ea1385860b 78 Gene3D G3DSA:2.30.170.40 2 77 1.4E-38 T 23-04-2016 MSIP34_RS01740 ba7f99755f06e15968be14ea1385860b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.653 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 Gene3D G3DSA:3.30.70.600 4 102 1.8E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 SMART SM01403 7 101 1.2E-56 T 23-04-2016 IPR027486 Ribosomal protein S10 domain MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 PANTHER PTHR11700 1 102 8.0E-50 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.1E-17 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.1E-17 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.1E-17 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 5.3E-36 T 23-04-2016 IPR027486 Ribosomal protein S10 domain MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.581 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.9E-46 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01575 4050dd0fcbeaa846c8d06d089fe146b0 102 SUPERFAMILY SSF54999 5 102 3.4E-38 T 23-04-2016 IPR027486 Ribosomal protein S10 domain MSIP34_RS02665 b39f2616d49c917b802af7ea16315e6e 211 Pfam PF00174 Oxidoreductase molybdopterin binding domain 52 193 2.7E-34 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 MSIP34_RS02665 b39f2616d49c917b802af7ea16315e6e 211 SUPERFAMILY SSF56524 30 210 9.94E-57 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 MSIP34_RS02665 b39f2616d49c917b802af7ea16315e6e 211 PANTHER PTHR19372 27 210 3.4E-62 T 23-04-2016 MSIP34_RS02665 b39f2616d49c917b802af7ea16315e6e 211 Gene3D G3DSA:3.90.420.10 25 206 8.7E-51 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 359 32.549 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 5.0E-30 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 Gene3D G3DSA:3.40.50.2000 258 335 5.0E-7 T 23-04-2016 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 PANTHER PTHR21015:SF22 5 359 1.2E-90 T 23-04-2016 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 Gene3D G3DSA:3.40.50.2000 2 200 2.9E-59 T 23-04-2016 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 354 3.2E-90 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 PANTHER PTHR21015 5 359 1.2E-90 T 23-04-2016 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 SUPERFAMILY SSF53756 3 358 6.73E-108 T 23-04-2016 MSIP34_RS02345 94859c98190bcc2cd06db4fdc90461b0 368 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 338 1.6E-31 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS10750 e09485d4d9526b1da58e91bc6480047d 256 Gene3D G3DSA:2.60.40.920 172 235 4.1E-4 T 23-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain MSIP34_RS10750 e09485d4d9526b1da58e91bc6480047d 256 Pfam PF05751 FixH 144 249 9.5E-12 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 Gene3D G3DSA:1.10.8.300 219 337 1.7E-23 T 23-04-2016 MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 PANTHER PTHR11603 8 340 3.2E-47 T 23-04-2016 MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 SUPERFAMILY SSF52540 8 312 4.09E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 46 64 4.34E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 115 133 4.34E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 PIRSF PIRSF002849 1 340 1.1E-81 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 SMART SM00382 42 186 4.1E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 Gene3D G3DSA:3.40.50.300 27 194 1.7E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03775 cb5788046625d233becda70eaf86c159 340 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 45 178 1.4E-27 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MSIP34_RS08845 9e9f073aa89eaa258b921ebbcefa39f7 213 SUPERFAMILY SSF52266 31 208 8.55E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain MSIP34_RS08845 9e9f073aa89eaa258b921ebbcefa39f7 213 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 195 8.8E-25 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain MSIP34_RS08845 9e9f073aa89eaa258b921ebbcefa39f7 213 PANTHER PTHR30383 14 205 2.8E-43 T 23-04-2016 MSIP34_RS08845 9e9f073aa89eaa258b921ebbcefa39f7 213 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 32 42 - T 23-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 MSIP34_RS08845 9e9f073aa89eaa258b921ebbcefa39f7 213 PANTHER PTHR30383:SF5 14 205 2.8E-43 T 23-04-2016 MSIP34_RS08845 9e9f073aa89eaa258b921ebbcefa39f7 213 Gene3D G3DSA:3.40.50.1110 30 209 9.2E-54 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 PANTHER PTHR11455 1 481 5.7E-189 T 23-04-2016 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 PRINTS PR00147 DNA photolyase signature 321 337 6.7E-29 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 PRINTS PR00147 DNA photolyase signature 144 160 6.7E-29 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 PRINTS PR00147 DNA photolyase signature 380 394 6.7E-29 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 PRINTS PR00147 DNA photolyase signature 341 359 6.7E-29 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 Gene3D G3DSA:3.40.50.620 3 147 6.5E-46 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 321 333 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 SUPERFAMILY SSF48173 198 473 2.75E-105 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 Gene3D G3DSA:1.10.579.10 280 473 2.1E-79 T 23-04-2016 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 PANTHER PTHR11455:SF18 1 481 5.7E-189 T 23-04-2016 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 341 360 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 Gene3D G3DSA:1.25.40.80 206 279 7.7E-32 T 23-04-2016 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 Gene3D G3DSA:1.25.40.80 148 163 7.7E-32 T 23-04-2016 MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 Pfam PF03441 FAD binding domain of DNA photolyase 271 471 3.4E-83 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 SUPERFAMILY SSF52425 4 184 3.53E-52 T 23-04-2016 IPR006050 DNA photolyase, N-terminal MSIP34_RS10935 244988a7edb63acda25614a53fa0351a 481 Pfam PF00875 DNA photolyase 7 164 5.7E-48 T 23-04-2016 IPR006050 DNA photolyase, N-terminal MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 SUPERFAMILY SSF52540 570 607 4.51E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 SUPERFAMILY SSF52540 188 245 4.51E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 SUPERFAMILY SSF52540 20 111 4.51E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 SUPERFAMILY SSF52540 581 607 2.07E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 SUPERFAMILY SSF52540 455 550 2.07E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 Pfam PF00270 DEAD/DEAH box helicase 32 85 1.2E-4 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 Pfam PF13307 Helicase C-terminal domain 462 624 3.0E-34 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 PANTHER PTHR11472:SF37 20 629 4.9E-177 T 23-04-2016 MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 PANTHER PTHR11472 20 629 4.9E-177 T 23-04-2016 MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 Gene3D G3DSA:3.40.50.300 468 608 2.3E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 SMART SM00491 477 611 5.9E-35 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 Gene3D G3DSA:3.40.50.300 31 112 7.3E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11575 c4de96253f268d6105e4b4e33dd982f6 652 Gene3D G3DSA:3.40.50.300 187 245 7.3E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09185 58c41c98fb65f1c1a9b2dd976caff51b 358 Pfam PF01757 Acyltransferase family 16 340 1.0E-21 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 MSIP34_RS09185 58c41c98fb65f1c1a9b2dd976caff51b 358 PANTHER PTHR23028 17 356 1.2E-37 T 23-04-2016 MSIP34_RS09250 10174618fcb6579a50d6e2f409f16c9f 274 SUPERFAMILY SSF53448 2 252 6.86E-10 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09030 591eb95811c959ff7a676f205dd8be17 322 Gene3D G3DSA:2.50.20.10 83 193 9.7E-7 T 23-04-2016 MSIP34_RS09030 591eb95811c959ff7a676f205dd8be17 322 PIRSF PIRSF005427 1 322 3.3E-96 T 23-04-2016 IPR005588 MucB/RseB MSIP34_RS09030 591eb95811c959ff7a676f205dd8be17 322 Pfam PF17188 MucB/RseB C-terminal domain 224 318 2.1E-24 T 23-04-2016 IPR033436 MucB/RseB, C-terminal MSIP34_RS09030 591eb95811c959ff7a676f205dd8be17 322 PANTHER PTHR38782 2 321 1.8E-49 T 23-04-2016 MSIP34_RS09030 591eb95811c959ff7a676f205dd8be17 322 PANTHER PTHR38782:SF1 2 321 1.8E-49 T 23-04-2016 MSIP34_RS09030 591eb95811c959ff7a676f205dd8be17 322 Pfam PF03888 MucB/RseB N-terminal domain 30 201 2.1E-52 T 23-04-2016 IPR033434 MucB/RseB, N-terminal MSIP34_RS09815 e04404e963f6ab04db7f9c26936991ed 249 SMART SM00382 31 225 5.9E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09815 e04404e963f6ab04db7f9c26936991ed 249 PANTHER PTHR24220 7 247 4.7E-97 T 23-04-2016 MSIP34_RS09815 e04404e963f6ab04db7f9c26936991ed 249 Pfam PF00005 ABC transporter 23 173 3.9E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS09815 e04404e963f6ab04db7f9c26936991ed 249 SUPERFAMILY SSF52540 4 243 8.77E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09815 e04404e963f6ab04db7f9c26936991ed 249 Gene3D G3DSA:3.40.50.300 3 244 1.8E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09815 e04404e963f6ab04db7f9c26936991ed 249 PANTHER PTHR24220:SF568 7 247 4.7E-97 T 23-04-2016 MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PANTHER PTHR24322:SF583 6 135 1.0E-43 T 23-04-2016 MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PANTHER PTHR24322:SF583 154 186 1.0E-43 T 23-04-2016 MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 3.3E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.3E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.3E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.3E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.3E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 SUPERFAMILY SSF51735 1 232 1.39E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 Gene3D G3DSA:3.40.50.720 1 232 2.6E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.7E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.7E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.7E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 Pfam PF00106 short chain dehydrogenase 4 192 2.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PANTHER PTHR24322 6 135 1.0E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS08750 ffb96480a57d49f68d0c2246d28c1a6b 232 PANTHER PTHR24322 154 186 1.0E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 SMART SM00487 53 245 1.4E-25 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Pfam PF00270 DEAD/DEAH box helicase 75 219 9.1E-6 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 PANTHER PTHR18934 62 246 0.0 T 23-04-2016 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 PANTHER PTHR18934 765 895 0.0 T 23-04-2016 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 PANTHER PTHR18934 292 727 0.0 T 23-04-2016 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 SUPERFAMILY SSF52540 62 250 1.6E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 SUPERFAMILY SSF52540 295 592 1.6E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 291 1321 0.0 T 23-04-2016 IPR010222 RNA helicase HrpA GO:0004004 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 SMART SM00847 494 584 5.9E-37 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Pfam PF00271 Helicase conserved C-terminal domain 312 433 6.5E-10 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Gene3D G3DSA:3.40.50.300 62 220 7.6E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 PANTHER PTHR18934:SF109 62 246 0.0 T 23-04-2016 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 PANTHER PTHR18934:SF109 765 895 0.0 T 23-04-2016 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 PANTHER PTHR18934:SF109 292 727 0.0 T 23-04-2016 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Pfam PF04408 Helicase associated domain (HA2) 498 582 3.3E-19 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 SMART SM00490 329 434 1.7E-12 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Gene3D G3DSA:3.40.50.300 301 448 8.7E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Pfam PF11898 Domain of unknown function (DUF3418) 738 1321 1.8E-213 T 23-04-2016 IPR024590 RNA helicase HrpA, C-terminal MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 638 724 5.1E-18 T 23-04-2016 IPR011709 Domain of unknown function DUF1605 MSIP34_RS05500 282f0e79b1b1fe8df04d0722d4b5ec67 1324 SMART SM00382 78 400 1.0E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 Gene3D G3DSA:3.40.50.300 139 311 2.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 PANTHER PTHR30305 1 316 1.5E-94 T 23-04-2016 MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 Pfam PF07475 HPr Serine kinase C-terminal domain 134 305 9.7E-64 T 23-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 Pfam PF02603 HPr Serine kinase N terminus 4 131 1.3E-27 T 23-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 Gene3D G3DSA:3.40.1390.20 9 133 1.2E-32 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 312 35.61 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 SUPERFAMILY SSF53795 140 304 2.5E-32 T 23-04-2016 MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 SUPERFAMILY SSF75138 1 133 3.66E-31 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 PANTHER PTHR30305:SF1 1 316 1.5E-94 T 23-04-2016 MSIP34_RS01055 523038ea0aea08300440ef0ee570958f 321 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 5 309 7.1E-104 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 Pfam PF08281 Sigma-70, region 4 115 165 3.7E-13 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 Pfam PF04542 Sigma-70 region 2 16 80 4.0E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 PANTHER PTHR30173:SF30 14 173 7.5E-33 T 23-04-2016 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 Gene3D G3DSA:1.10.1740.10 10 82 3.0E-10 T 23-04-2016 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 165 1.0E-15 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 PANTHER PTHR30173 14 173 7.5E-33 T 23-04-2016 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 SUPERFAMILY SSF88659 90 170 5.98E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 Gene3D G3DSA:1.10.10.10 114 171 8.8E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02145 d561e34c42bcdc54fd55dd55cac36624 174 SUPERFAMILY SSF88946 10 101 2.35E-12 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 348 1.9E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 121 139 1.31E-13 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.31E-13 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 1.31E-13 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 304 326 1.31E-13 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 Gene3D G3DSA:3.50.50.60 13 130 3.3E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 Gene3D G3DSA:3.50.50.60 131 355 3.3E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PANTHER PTHR22912 217 330 1.4E-19 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PANTHER PTHR22912 179 200 1.4E-19 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PANTHER PTHR22912 2 159 1.4E-19 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 SUPERFAMILY SSF51905 12 351 2.65E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 3.22E-8 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 3.22E-8 T 23-04-2016 MSIP34_RS11790 0163b22c602243762a657163748ff062 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 326 3.22E-8 T 23-04-2016 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 PANTHER PTHR11019:SF54 234 339 9.8E-23 T 23-04-2016 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 Gene3D G3DSA:1.10.10.60 240 293 1.2E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 Gene3D G3DSA:1.10.10.60 294 335 3.2E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 SUPERFAMILY SSF46689 296 339 2.04E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 SMART SM00342 255 337 2.5E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 PANTHER PTHR11019 234 339 9.8E-23 T 23-04-2016 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 SUPERFAMILY SSF46689 239 289 1.84E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 Pfam PF12833 Helix-turn-helix domain 261 339 1.7E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS04895 b332162308a9d12143b3b49ad432e11d 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 292 333 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 PANTHER PTHR30012:SF0 58 395 3.6E-95 T 23-04-2016 MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 Pfam PF00482 Type II secretion system (T2SS), protein F 62 185 1.1E-26 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 Pfam PF00482 Type II secretion system (T2SS), protein F 265 386 2.2E-29 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 PANTHER PTHR30012 58 395 3.6E-95 T 23-04-2016 MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 1.4E-14 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 1.4E-14 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 375 394 1.4E-14 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS04320 2d67b363b2e54c1bae5aebd1c56e9c1c 395 PRINTS PR00812 Bacterial general secretion pathway protein F signature 359 373 1.4E-14 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 Gene3D G3DSA:3.40.50.1220 197 370 3.8E-62 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 PANTHER PTHR18968:SF116 11 584 0.0 T 23-04-2016 MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 203 338 9.4E-42 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 Gene3D G3DSA:3.40.50.970 12 185 2.8E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 SUPERFAMILY SSF52518 385 582 3.99E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 PANTHER PTHR18968 11 584 0.0 T 23-04-2016 MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 SUPERFAMILY SSF52467 196 375 2.42E-61 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 SUPERFAMILY SSF52518 8 192 1.73E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 407 554 1.4E-48 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 Gene3D G3DSA:3.40.50.970 371 573 1.8E-74 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 177 1.2E-55 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 MSIP34_RS03095 15056fc907f451ecc8f0ddb9a8da5353 585 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 581 9.5E-254 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 328 27.535 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 Gene3D G3DSA:3.30.450.40 174 336 5.0E-40 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 SUPERFAMILY SSF55781 70 336 1.61E-63 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 PANTHER PTHR34824 1 336 2.5E-106 T 23-04-2016 MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 8 71 1.5E-4 T 23-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 SUPERFAMILY SSF46785 1 81 1.44E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 Pfam PF01628 HrcA protein C terminal domain 101 321 8.6E-62 T 23-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 Gene3D G3DSA:1.10.10.10 1 83 9.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 PIRSF PIRSF005485 1 338 7.2E-111 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 MSIP34_RS09540 4bc1fc92ebca7ec2491ad915bae1153c 338 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 333 3.4E-101 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Gene3D G3DSA:3.30.70.270 479 638 2.3E-57 T 23-04-2016 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Gene3D G3DSA:3.30.450.40 24 164 6.9E-14 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 180 305 1.5E-26 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 353 470 2.7E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SUPERFAMILY SSF55073 482 637 1.08E-50 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Pfam PF01590 GAF domain 26 158 1.1E-11 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Gene3D G3DSA:3.30.450.20 338 464 2.8E-23 T 23-04-2016 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SUPERFAMILY SSF55781 26 163 4.58E-27 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SMART SM00086 256 298 7.6E-8 T 23-04-2016 IPR001610 PAC motif MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SMART SM00086 426 466 0.011 T 23-04-2016 IPR001610 PAC motif MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SUPERFAMILY SSF55785 171 295 2.09E-22 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 473 638 9.6E-44 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SMART SM00065 26 168 3.3E-16 T 23-04-2016 IPR003018 GAF domain GO:0005515 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Pfam PF08447 PAS fold 207 291 8.2E-11 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 PANTHER PTHR33121:SF7 9 156 6.6E-51 T 23-04-2016 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SMART SM00267 466 639 1.0E-65 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Pfam PF00990 Diguanylate cyclase, GGDEF domain 477 635 1.7E-52 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SUPERFAMILY SSF55785 360 474 4.35E-24 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Pfam PF00989 PAS fold 354 460 3.2E-10 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 Gene3D G3DSA:3.30.450.20 181 316 1.2E-25 T 23-04-2016 MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SMART SM00091 183 249 1.7E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 SMART SM00091 349 416 1.1E-8 T 23-04-2016 IPR000014 PAS domain MSIP34_RS12275 b64b952af711701daac316a116fd0219 640 PANTHER PTHR33121 9 156 6.6E-51 T 23-04-2016 MSIP34_RS01730 440fce9b0316d1ad9f59ecdec44a4dc2 394 PANTHER PTHR11351:SF33 11 378 1.2E-132 T 23-04-2016 MSIP34_RS01730 440fce9b0316d1ad9f59ecdec44a4dc2 394 Pfam PF00487 Fatty acid desaturase 10 212 6.0E-11 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 MSIP34_RS01730 440fce9b0316d1ad9f59ecdec44a4dc2 394 PANTHER PTHR11351 11 378 1.2E-132 T 23-04-2016 MSIP34_RS01730 440fce9b0316d1ad9f59ecdec44a4dc2 394 Pfam PF01610 Transposase 284 391 2.3E-12 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain MSIP34_RS12760 b7b1c839975ab9c44174a628d6027b0f 364 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 317 341 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 MSIP34_RS12760 b7b1c839975ab9c44174a628d6027b0f 364 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 360 3.8E-129 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 MSIP34_RS12760 b7b1c839975ab9c44174a628d6027b0f 364 Pfam PF01098 Cell cycle protein 18 360 4.9E-107 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 MSIP34_RS12760 b7b1c839975ab9c44174a628d6027b0f 364 PANTHER PTHR30474:SF1 11 362 1.2E-141 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 MSIP34_RS12760 b7b1c839975ab9c44174a628d6027b0f 364 PANTHER PTHR30474 11 362 1.2E-141 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 Gene3D G3DSA:1.20.140.10 229 408 1.4E-55 T 23-04-2016 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 226 3.4E-9 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 Gene3D G3DSA:2.40.110.10 150 228 1.1E-23 T 23-04-2016 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 33 127 2.4E-10 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 SUPERFAMILY SSF47203 244 410 1.37E-22 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 254 386 1.2E-20 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 PANTHER PTHR10909 27 401 1.6E-165 T 23-04-2016 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 21 410 1.1E-194 T 23-04-2016 IPR023922 Sulphate-starvation-induced SfnB MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 SUPERFAMILY SSF56645 33 236 7.46E-46 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 Gene3D G3DSA:1.10.540.10 19 128 1.2E-28 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 MSIP34_RS09855 cbce07d0ca5cd474287518fb2a8c0c6a 411 PANTHER PTHR10909:SF300 27 401 1.6E-165 T 23-04-2016 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 PANTHER PTHR30093:SF4 9 70 1.2E-20 T 23-04-2016 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 Gene3D G3DSA:3.30.700.10 13 105 4.6E-23 T 23-04-2016 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 PANTHER PTHR30093 9 70 1.2E-20 T 23-04-2016 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 1.4E-10 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 1.4E-10 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 Pfam PF13633 Prokaryotic N-terminal methylation site 10 36 1.6E-12 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 SUPERFAMILY SSF54523 13 111 1.52E-23 T 23-04-2016 MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS13040 886a3b14f541c196b1b2e54aee524e90 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 33 4.2E-10 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 Gene3D G3DSA:3.40.50.720 2 175 1.1E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 247 1.1E-38 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 Gene3D G3DSA:3.90.25.10 176 301 1.1E-33 T 23-04-2016 MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 PANTHER PTHR10366:SF469 1 319 3.7E-91 T 23-04-2016 MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 SUPERFAMILY SSF51735 2 319 6.49E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 PANTHER PTHR10366 1 319 3.7E-91 T 23-04-2016 MSIP34_RS09555 0c088e9aff78e48747d8db8cdc524a9c 326 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 319 7.0E-122 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 Gene3D G3DSA:3.60.40.10 1 242 3.0E-56 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 PANTHER PTHR13832 12 263 7.6E-39 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 SMART SM00332 2 241 2.9E-14 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 SUPERFAMILY SSF81606 1 243 1.16E-54 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 PANTHER PTHR13832:SF278 12 263 7.6E-39 T 23-04-2016 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 Pfam PF13672 Protein phosphatase 2C 12 208 5.9E-15 T 23-04-2016 MSIP34_RS00240 e70af10828157269a408fe08dd05b39c 300 SMART SM00331 8 243 2.2E-17 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 SUPERFAMILY SSF46626 63 159 3.35E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 PANTHER PTHR40942:SF1 52 158 1.4E-30 T 23-04-2016 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 PRINTS PR00607 Class IE cytochrome C signature 143 154 3.11E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 PRINTS PR00607 Class IE cytochrome C signature 89 100 3.11E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 PRINTS PR00607 Class IE cytochrome C signature 100 110 3.11E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 PRINTS PR00607 Class IE cytochrome C signature 128 140 3.11E-13 T 23-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 PANTHER PTHR40942 52 158 1.4E-30 T 23-04-2016 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 SUPERFAMILY SSF46626 238 314 1.12E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 238 311 1.6E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 80 153 9.0E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 Gene3D G3DSA:1.10.760.10 80 156 4.7E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11430 d7aa042ee65ca94f0192299c8a11a3f8 322 Gene3D G3DSA:1.10.760.10 238 314 1.7E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10800 b3134fa62ffe8fde52262a5f71e5d7d8 473 SUPERFAMILY SSF56935 81 231 3.36E-17 T 23-04-2016 MSIP34_RS10800 b3134fa62ffe8fde52262a5f71e5d7d8 473 SUPERFAMILY SSF56935 258 471 3.36E-17 T 23-04-2016 MSIP34_RS10800 b3134fa62ffe8fde52262a5f71e5d7d8 473 Pfam PF07396 Phosphate-selective porin O and P 89 473 6.5E-36 T 23-04-2016 IPR010870 Phosphate-selective porin O/P MSIP34_RS10800 b3134fa62ffe8fde52262a5f71e5d7d8 473 Gene3D G3DSA:2.40.160.10 61 473 1.5E-100 T 23-04-2016 IPR023614 Porin domain MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 Gene3D G3DSA:2.40.50.100 102 132 3.1E-15 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 Gene3D G3DSA:2.40.50.100 322 357 3.1E-15 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PANTHER PTHR30386:SF4 27 153 6.9E-121 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PANTHER PTHR30386:SF4 184 470 6.9E-121 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 Pfam PF13437 HlyD family secretion protein 324 437 1.5E-18 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 Gene3D G3DSA:1.20.5.1050 186 227 8.1E-4 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 434 449 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 337 358 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 449 469 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 68 91 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 394 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 394 417 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 110 130 4.2E-44 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 Pfam PF13533 Biotin-lipoyl like 99 134 1.3E-5 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 60 470 5.1E-124 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PANTHER PTHR30386 27 153 6.9E-121 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 PANTHER PTHR30386 184 470 6.9E-121 T 23-04-2016 MSIP34_RS05150 4bc6cfc2dc400961effaa5bc5edece64 470 ProSitePatterns PS00543 HlyD family secretion proteins signature. 434 456 - T 23-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 PANTHER PTHR13693 5 382 4.1E-166 T 23-04-2016 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 Gene3D G3DSA:3.90.1150.10 273 381 7.3E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 Pfam PF00155 Aminotransferase class I and II 41 379 2.3E-59 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 383 49.888 T 23-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 SUPERFAMILY SSF53383 3 382 3.72E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 379 2.6E-144 T 23-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 PANTHER PTHR13693:SF53 5 382 4.1E-166 T 23-04-2016 MSIP34_RS02875 8e80304fafe633f47d3b8f7b0608c78f 390 Gene3D G3DSA:3.40.640.10 58 272 8.9E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 SMART SM00954 258 368 4.3E-64 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Gene3D G3DSA:3.10.20.30 410 471 5.3E-22 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 SUPERFAMILY SSF109604 29 214 1.7E-75 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Pfam PF13291 ACT domain 652 729 1.3E-19 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 PANTHER PTHR21262 30 732 0.0 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Gene3D G3DSA:3.30.460.10 201 348 7.0E-47 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Pfam PF13328 HD domain 49 198 2.9E-53 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 SUPERFAMILY SSF81271 398 470 2.4E-22 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 PANTHER PTHR21262:SF0 30 732 0.0 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 SUPERFAMILY SSF55021 654 729 3.04E-10 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 SMART SM00471 64 176 1.7E-9 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 SUPERFAMILY SSF81301 204 415 1.47E-64 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Pfam PF02824 TGS domain 411 470 2.4E-19 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Pfam PF04607 Region found in RelA / SpoT proteins 258 367 4.7E-34 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 Gene3D G3DSA:3.30.70.260 654 727 1.3E-13 T 23-04-2016 MSIP34_RS00265 eac545b2eebf6886de0e94ae0cb8ae2e 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 49 728 4.4E-244 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 MSIP34_RS13755 98145c725bc949a3d239a888c61b2a5e 85 SUPERFAMILY SSF50249 1 71 1.11E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS13755 98145c725bc949a3d239a888c61b2a5e 85 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 75 25.302 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 MSIP34_RS13755 98145c725bc949a3d239a888c61b2a5e 85 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.0E-22 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 MSIP34_RS13755 98145c725bc949a3d239a888c61b2a5e 85 PANTHER PTHR33370 1 83 8.0E-37 T 23-04-2016 MSIP34_RS13755 98145c725bc949a3d239a888c61b2a5e 85 Gene3D G3DSA:2.40.50.140 1 71 8.2E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS13755 98145c725bc949a3d239a888c61b2a5e 85 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.8E-30 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 Pfam PF02321 Outer membrane efflux protein 73 245 3.2E-11 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 Pfam PF02321 Outer membrane efflux protein 269 445 6.8E-12 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 PANTHER PTHR30203 65 448 1.4E-53 T 23-04-2016 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 PANTHER PTHR30203:SF9 65 448 1.4E-53 T 23-04-2016 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 SUPERFAMILY SSF56954 62 446 1.28E-56 T 23-04-2016 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 SUPERFAMILY SSF56954 2 23 1.28E-56 T 23-04-2016 MSIP34_RS02045 54e60f79cad63174ac7b0e53e88f4a32 462 Gene3D G3DSA:1.20.1600.10 67 446 1.1E-35 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 Gene3D G3DSA:2.40.170.20 143 705 1.2E-55 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 SUPERFAMILY SSF56935 421 705 4.76E-73 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 SUPERFAMILY SSF56935 37 390 4.76E-73 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 688 705 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 Gene3D G3DSA:2.170.130.10 55 142 5.3E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 PANTHER PTHR32552 49 397 1.4E-64 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 PANTHER PTHR32552 421 705 1.4E-64 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 Pfam PF00593 TonB dependent receptor 434 703 1.6E-21 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 PANTHER PTHR32552:SF11 49 397 1.4E-64 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 PANTHER PTHR32552:SF11 421 705 1.4E-64 T 23-04-2016 MSIP34_RS02745 49bf0ecdc951cebfc49cebf3c3612f87 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 142 4.9E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 SUPERFAMILY SSF55874 276 435 5.89E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 435 9.4E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 SMART SM00388 222 287 8.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 Gene3D G3DSA:3.30.565.10 293 426 1.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PANTHER PTHR24423:SF474 163 437 2.8E-59 T 23-04-2016 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PANTHER PTHR24423:SF474 1 7 2.8E-59 T 23-04-2016 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 SUPERFAMILY SSF47384 206 285 4.12E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 286 1.7E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 Gene3D G3DSA:1.10.287.130 217 283 6.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 SMART SM00387 330 441 8.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PANTHER PTHR24423 163 437 2.8E-59 T 23-04-2016 MSIP34_RS11890 52abe86c25355a4f2a48b6afe3a54db7 448 PANTHER PTHR24423 1 7 2.8E-59 T 23-04-2016 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 PANTHER PTHR34354:SF1 9 129 8.3E-53 T 23-04-2016 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 7 117 5.6E-54 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 PIRSF PIRSF027377 1 123 7.4E-55 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 Gene3D G3DSA:3.30.1130.10 4 121 5.2E-46 T 23-04-2016 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 Pfam PF14489 QueF-like protein 40 118 4.1E-33 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 139 52.629 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 SUPERFAMILY SSF55620 4 112 1.26E-26 T 23-04-2016 MSIP34_RS06710 8ad0a660f4a737b5d795d2134eee3d44 139 PANTHER PTHR34354 9 129 8.3E-53 T 23-04-2016 MSIP34_RS03065 649e542d493b2df35c1d2926aacece3f 173 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 25 171 1.2E-32 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase MSIP34_RS03065 649e542d493b2df35c1d2926aacece3f 173 Gene3D G3DSA:3.30.530.20 25 172 2.2E-43 T 23-04-2016 IPR023393 START-like domain MSIP34_RS03065 649e542d493b2df35c1d2926aacece3f 173 SUPERFAMILY SSF55961 24 171 4.44E-33 T 23-04-2016 MSIP34_RS03065 649e542d493b2df35c1d2926aacece3f 173 PANTHER PTHR39332 16 173 8.8E-27 T 23-04-2016 MSIP34_RS03065 649e542d493b2df35c1d2926aacece3f 173 PANTHER PTHR39332:SF2 16 173 8.8E-27 T 23-04-2016 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 95 2.0E-37 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 186 31.779 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 189 5.2E-31 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 185 1.7E-48 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 Pfam PF01386 Ribosomal L25p family 5 92 4.6E-25 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 Gene3D G3DSA:2.40.240.10 3 95 9.3E-34 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 Gene3D G3DSA:2.170.120.20 98 196 2.9E-32 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 SUPERFAMILY SSF50715 1 195 2.62E-58 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 PANTHER PTHR33284 1 205 5.3E-64 T 23-04-2016 MSIP34_RS10160 f4519cb181d69a95bbd375b6306cedfc 205 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 3 95 22.715 T 23-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 MSIP34_RS00030 7772166d44bacdf0df6e6bb1ab6c0281 103 SUPERFAMILY SSF54913 1 100 1.0E-26 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta MSIP34_RS00030 7772166d44bacdf0df6e6bb1ab6c0281 103 Pfam PF02641 Uncharacterized ACR, COG1993 8 86 1.6E-16 T 23-04-2016 IPR003793 Domain of unknown function DUF190 MSIP34_RS00030 7772166d44bacdf0df6e6bb1ab6c0281 103 Gene3D G3DSA:3.30.70.120 2 102 6.1E-28 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 294 314 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 PANTHER PTHR11938 9 338 4.4E-100 T 23-04-2016 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 3 338 51.023 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 Pfam PF01180 Dihydroorotate dehydrogenase 50 336 9.1E-96 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 82 101 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 PIRSF PIRSF000164 12 338 3.5E-95 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 Gene3D G3DSA:3.20.20.70 3 336 2.7E-128 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 4 337 5.6E-133 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS11270 27720e1a9f3982acbc6759bc387b4ba3 339 SUPERFAMILY SSF51395 4 336 1.03E-105 T 23-04-2016 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 Gene3D G3DSA:3.40.50.720 157 266 7.0E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 SMART SM00829 13 335 1.6E-11 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 Pfam PF13602 Zinc-binding dehydrogenase 194 335 5.1E-22 T 23-04-2016 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 93 5.1E-7 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 PANTHER PTHR11695 18 336 5.6E-128 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 SUPERFAMILY SSF50129 16 143 3.3E-29 T 23-04-2016 IPR011032 GroES-like MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 338 5.5E-169 T 23-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 Gene3D G3DSA:3.90.180.10 1 156 1.6E-32 T 23-04-2016 IPR011032 GroES-like MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 150 171 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 SUPERFAMILY SSF51735 117 289 7.49E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13530 b6d9d49d59f4d9305129483def6d0bf1 338 PANTHER PTHR11695:SF558 18 336 5.6E-128 T 23-04-2016 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 262 34.327 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 Gene3D G3DSA:3.20.20.70 1 263 1.5E-101 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 SUPERFAMILY SSF51366 1 252 3.48E-90 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 PANTHER PTHR10314 74 130 2.8E-26 T 23-04-2016 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 PANTHER PTHR10314 11 51 2.8E-26 T 23-04-2016 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 PANTHER PTHR10314:SF4 74 130 2.8E-26 T 23-04-2016 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 PANTHER PTHR10314:SF4 11 51 2.8E-26 T 23-04-2016 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 Pfam PF00290 Tryptophan synthase alpha chain 8 256 6.4E-89 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07860 b1f6ce474cd48105d584a26a671032bb 266 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 8.1E-77 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 SUPERFAMILY SSF53098 2 182 1.77E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 Gene3D G3DSA:3.30.420.10 4 180 2.8E-69 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 SMART SM00479 7 180 2.5E-19 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 PANTHER PTHR11046:SF1 3 182 6.9E-102 T 23-04-2016 MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 PANTHER PTHR11046 3 182 6.9E-102 T 23-04-2016 MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 Pfam PF00929 Exonuclease 9 170 5.4E-29 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III MSIP34_RS07310 8d3958858ada3453bb08aec047eea82f 182 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.947 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 SMART SM00316 37 117 1.9E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 422 9.1E-161 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 Gene3D G3DSA:2.40.50.140 30 123 1.3E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 SUPERFAMILY SSF50249 40 123 4.34E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 Pfam PF10150 Ribonuclease E/G family 119 388 3.6E-93 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 PANTHER PTHR30001 1 759 0.0 T 23-04-2016 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 PANTHER PTHR30001:SF1 1 759 0.0 T 23-04-2016 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 Pfam PF00575 S1 RNA binding domain 36 116 6.6E-10 T 23-04-2016 IPR003029 S1 domain GO:0003676 MSIP34_RS06445 f2c51f8e8734e70805d8643bbf1cf0b1 913 Hamap MF_00970 Ribonuclease E [rne]. 1 895 34.311 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 SUPERFAMILY SSF55486 183 397 2.05E-9 T 23-04-2016 MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 Gene3D G3DSA:2.30.42.10 475 558 1.0E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 SMART SM00228 478 546 6.8E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 Pfam PF05299 M61 glycyl aminopeptidase 271 387 5.5E-47 T 23-04-2016 IPR007963 Peptidase M61, catalytic domain MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 Pfam PF13180 PDZ domain 481 553 7.3E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 SUPERFAMILY SSF50156 475 554 2.93E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS04655 6443aa6b4149d8978718681419b28874 599 PIRSF PIRSF016493 1 583 2.9E-207 T 23-04-2016 IPR024191 Peptidase M61 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 288 60.089 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 Gene3D G3DSA:3.30.930.10 1 210 8.2E-106 T 23-04-2016 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 294 1.3E-158 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 Gene3D G3DSA:1.20.58.180 212 293 4.7E-37 T 23-04-2016 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 2.4E-69 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 2.4E-69 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 2.4E-69 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 248 264 2.4E-69 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 2.4E-69 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 2.4E-69 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 PANTHER PTHR30075 2 310 8.4E-245 T 23-04-2016 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 286 1.3E-149 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 MSIP34_RS10695 aa281bc8270417bbbee9d2ae9d5b80f1 312 SUPERFAMILY SSF55681 3 287 7.21E-133 T 23-04-2016 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 10 342 2.3E-141 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 8 344 36.705 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 PANTHER PTHR21712 6 342 1.8E-118 T 23-04-2016 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 SUPERFAMILY SSF52733 3 343 1.7E-124 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 Pfam PF02277 Phosphoribosyltransferase 6 342 9.0E-137 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 Gene3D G3DSA:3.40.50.10210 68 325 8.6E-115 T 23-04-2016 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 PANTHER PTHR21712:SF4 6 342 1.8E-118 T 23-04-2016 MSIP34_RS00725 bf90203affd5c5d2937f982aa4da3c4b 347 Gene3D G3DSA:1.10.1610.10 3 67 1.0E-30 T 23-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 SUPERFAMILY SSF55874 299 462 7.07E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 SMART SM00388 243 309 1.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 461 1.5E-146 T 23-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 5.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 Gene3D G3DSA:3.30.565.10 297 464 2.6E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 Gene3D G3DSA:1.10.287.130 233 296 7.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PANTHER PTHR24423 1 7 6.0E-101 T 23-04-2016 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PANTHER PTHR24423 183 462 6.0E-101 T 23-04-2016 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 461 1.8E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 309 9.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 SUPERFAMILY SSF47384 227 309 2.75E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 Pfam PF00672 HAMP domain 172 239 2.2E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 SMART SM00304 189 242 1.8E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PANTHER PTHR24423:SF354 1 7 6.0E-101 T 23-04-2016 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 PANTHER PTHR24423:SF354 183 462 6.0E-101 T 23-04-2016 MSIP34_RS02035 a363e5eb169e88662785b3f4daf389a4 469 SMART SM00387 352 464 1.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 Gene3D G3DSA:3.90.550.10 1 250 2.3E-84 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 PANTHER PTHR21485 1 249 5.6E-110 T 23-04-2016 MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 PANTHER PTHR21485:SF4 1 249 5.6E-110 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 4.0E-92 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 43.383 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 SUPERFAMILY SSF53448 2 248 8.21E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS03255 29132dcdd8bd3cad73fdd2ae56124903 254 Pfam PF02348 Cytidylyltransferase 5 222 1.5E-59 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 MSIP34_RS04550 525a29c57847d59a51887e39ff3fab26 619 SUPERFAMILY SSF50249 207 549 1.03E-77 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS04550 525a29c57847d59a51887e39ff3fab26 619 PANTHER PTHR23355 237 561 2.7E-37 T 23-04-2016 MSIP34_RS04550 525a29c57847d59a51887e39ff3fab26 619 SMART SM00955 234 505 4.5E-57 T 23-04-2016 MSIP34_RS04550 525a29c57847d59a51887e39ff3fab26 619 PANTHER PTHR23355:SF5 237 561 2.7E-37 T 23-04-2016 MSIP34_RS04550 525a29c57847d59a51887e39ff3fab26 619 Pfam PF00773 RNB domain 464 504 1.1E-6 T 23-04-2016 MSIP34_RS04550 525a29c57847d59a51887e39ff3fab26 619 Pfam PF00773 RNB domain 238 459 8.5E-35 T 23-04-2016 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 156 5.5E-49 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 SUPERFAMILY SSF47240 1 156 7.29E-47 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PANTHER PTHR30295:SF9 1 155 7.1E-68 T 23-04-2016 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 65 85 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 129 150 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 23 43 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 107 127 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 86 106 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 3 22 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PRINTS PR00601 Bacterioferritin signature 44 64 3.2E-47 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 Gene3D G3DSA:1.20.1260.10 1 157 1.5E-54 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PIRSF PIRSF002560 1 158 1.3E-57 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 PANTHER PTHR30295 1 155 7.1E-68 T 23-04-2016 MSIP34_RS10740 085cda9101b590f76e2a186fce0c7c4a 161 Pfam PF00210 Ferritin-like domain 10 144 8.6E-34 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MSIP34_RS13445 63db0bfed00c7c8f97126a6cbb23cf76 292 PANTHER PTHR14194:SF71 1 291 1.3E-61 T 23-04-2016 MSIP34_RS13445 63db0bfed00c7c8f97126a6cbb23cf76 292 Pfam PF05368 NmrA-like family 6 226 8.1E-25 T 23-04-2016 IPR008030 NmrA-like domain MSIP34_RS13445 63db0bfed00c7c8f97126a6cbb23cf76 292 SUPERFAMILY SSF51735 2 262 1.56E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13445 63db0bfed00c7c8f97126a6cbb23cf76 292 PANTHER PTHR14194 1 291 1.3E-61 T 23-04-2016 MSIP34_RS13445 63db0bfed00c7c8f97126a6cbb23cf76 292 Gene3D G3DSA:3.40.50.720 1 223 1.3E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13920 ad8aca2da5428f5969c115f236d9c83b 128 PANTHER PTHR33452:SF6 7 128 2.8E-26 T 23-04-2016 MSIP34_RS13920 ad8aca2da5428f5969c115f236d9c83b 128 PANTHER PTHR33452 7 128 2.8E-26 T 23-04-2016 MSIP34_RS13920 ad8aca2da5428f5969c115f236d9c83b 128 Pfam PF07681 DoxX 9 89 3.0E-17 T 23-04-2016 IPR032808 DoxX family MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 PANTHER PTHR11831 1 201 5.4E-66 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 SUPERFAMILY SSF55174 3 201 4.45E-58 T 23-04-2016 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 Pfam PF01479 S4 domain 94 141 1.4E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 SMART SM01390 3 93 2.0E-35 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 Gene3D G3DSA:1.10.1050.10 1 97 3.2E-37 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 SMART SM00363 94 151 1.1E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 203 31.348 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 93 8.1E-22 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 Gene3D G3DSA:3.10.290.10 98 192 2.5E-23 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 PANTHER PTHR11831:SF4 1 201 5.4E-66 T 23-04-2016 MSIP34_RS08930 0454ff8c43b13604add44b59fb2e9c08 205 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 202 1.3E-65 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 SMART SM00433 34 792 3.0E-260 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 SUPERFAMILY SSF56719 396 562 4.18E-89 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 SUPERFAMILY SSF56719 725 791 4.18E-89 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Gene3D G3DSA:3.30.565.10 4 219 7.6E-91 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Pfam PF01751 Toprim domain 421 533 4.7E-18 T 23-04-2016 IPR006171 Toprim domain MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 183 198 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 472 481 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 4 14 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 768 784 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 752 764 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 222 244 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR01159 DNA gyrase subunit B signature 198 211 1.8E-77 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 34 49 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 507 524 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 489 505 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 422 436 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 270 283 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 69 82 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 116 130 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 527 539 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PRINTS PR00418 DNA topoisomerase II family signature 731 747 8.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Pfam PF00204 DNA gyrase B 223 392 2.4E-57 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 799 101.583 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 727 788 7.7E-31 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PANTHER PTHR10169 719 799 6.5E-288 T 23-04-2016 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 PANTHER PTHR10169 2 555 6.5E-288 T 23-04-2016 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Gene3D G3DSA:3.30.230.10 222 394 9.0E-74 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 SUPERFAMILY SSF54211 223 394 1.57E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 SUPERFAMILY SSF55874 4 216 1.14E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 SMART SM00387 30 178 2.2E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 799 6.3E-300 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 174 2.6E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Gene3D G3DSA:3.40.50.670 713 781 3.8E-101 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS00015 d23170d5bb59858498be72a32686d386 799 Gene3D G3DSA:3.40.50.670 406 552 3.8E-101 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 Gene3D G3DSA:2.130.10.10 17 311 1.1E-77 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 Pfam PF10282 Lactonase, 7-bladed beta-propeller 210 299 1.4E-5 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 Pfam PF10282 Lactonase, 7-bladed beta-propeller 126 207 1.7E-8 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 189 228 3.7E-11 T 23-04-2016 IPR011964 YVTN beta-propeller repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 22 60 1.8E-13 T 23-04-2016 IPR011964 YVTN beta-propeller repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 273 302 2.0E-9 T 23-04-2016 IPR011964 YVTN beta-propeller repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 230 270 2.3E-15 T 23-04-2016 IPR011964 YVTN beta-propeller repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 146 185 1.2E-13 T 23-04-2016 IPR011964 YVTN beta-propeller repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 SMART SM00135 253 296 4.5 T 23-04-2016 IPR000033 LDLR class B repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 SMART SM00135 85 129 5.1 T 23-04-2016 IPR000033 LDLR class B repeat MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 PANTHER PTHR13833 23 300 3.3E-41 T 23-04-2016 MSIP34_RS03070 c57b6b57e998134545a9ca567a4c6cb8 318 SUPERFAMILY SSF51004 7 306 1.75E-75 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 SUPERFAMILY SSF51735 1 258 7.66E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PANTHER PTHR24322 12 138 1.3E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PANTHER PTHR24322 154 186 1.3E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 Pfam PF00106 short chain dehydrogenase 8 194 1.8E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 Gene3D G3DSA:3.40.50.720 2 258 1.6E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PANTHER PTHR24322:SF25 12 138 1.3E-68 T 23-04-2016 MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PANTHER PTHR24322:SF25 154 186 1.3E-68 T 23-04-2016 MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.89E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.89E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.89E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.89E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.89E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.89E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.84E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.84E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07190 c6185291f3b83232655996e1bd32d054 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.84E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS14000 84df9c5858deb13de60b14460a811374 68 PIRSF PIRSF039008 1 66 1.2E-32 T 23-04-2016 IPR026042 Stress response protein YjbJ MSIP34_RS14000 84df9c5858deb13de60b14460a811374 68 Pfam PF05532 CsbD-like 4 56 1.1E-18 T 23-04-2016 IPR008462 CsbD-like MSIP34_RS14000 84df9c5858deb13de60b14460a811374 68 SUPERFAMILY SSF69047 1 66 3.14E-26 T 23-04-2016 IPR008462 CsbD-like MSIP34_RS14000 84df9c5858deb13de60b14460a811374 68 PANTHER PTHR34977 1 61 9.0E-14 T 23-04-2016 MSIP34_RS14000 84df9c5858deb13de60b14460a811374 68 Gene3D G3DSA:1.10.1470.10 1 64 2.1E-29 T 23-04-2016 IPR008462 CsbD-like MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 SUPERFAMILY SSF52964 29 157 1.15E-37 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Pfam PF07676 WD40-like Beta Propeller Repeat 273 309 2.6E-13 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Pfam PF07676 WD40-like Beta Propeller Repeat 318 349 1.7E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Pfam PF07676 WD40-like Beta Propeller Repeat 190 214 1.8E-5 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Pfam PF07676 WD40-like Beta Propeller Repeat 234 265 1.3E-7 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Pfam PF07676 WD40-like Beta Propeller Repeat 367 389 0.038 T 23-04-2016 IPR011659 WD40-like Beta Propeller MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 SUPERFAMILY SSF69304 150 421 8.89E-59 T 23-04-2016 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 20 420 1.2E-160 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Gene3D G3DSA:2.130.10.10 147 421 4.0E-81 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 PANTHER PTHR11731:SF123 156 424 4.0E-77 T 23-04-2016 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 PANTHER PTHR11731:SF123 1 119 4.0E-77 T 23-04-2016 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Hamap MF_00671 Protein TolB [tolB]. 4 419 35.036 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Gene3D G3DSA:3.40.50.10070 23 146 5.0E-45 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 PANTHER PTHR11731 156 424 4.0E-77 T 23-04-2016 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 PANTHER PTHR11731 1 119 4.0E-77 T 23-04-2016 MSIP34_RS12065 f5a1179cce9e62530a4999c055922d74 424 Pfam PF04052 TolB amino-terminal domain 23 125 7.7E-30 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 PANTHER PTHR30194 1 174 3.7E-64 T 23-04-2016 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 118 152 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 158 46.617 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 155 2.6E-53 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 112 131 3.2E-34 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 66 82 3.2E-34 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 143 155 3.2E-34 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 88 104 3.2E-34 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 3.2E-34 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 Gene3D G3DSA:3.30.420.10 1 160 3.3E-66 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 SUPERFAMILY SSF53098 1 159 3.54E-53 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS12100 0684b43f079839925f3a31b33347cc95 178 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 159 8.5E-59 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 MSIP34_RS10720 e51b044b96eb9c22dd5fd3f880bb6b3d 154 Pfam PF02082 Transcriptional regulator 5 86 5.3E-21 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type MSIP34_RS10720 e51b044b96eb9c22dd5fd3f880bb6b3d 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 133 2.6E-28 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type MSIP34_RS10720 e51b044b96eb9c22dd5fd3f880bb6b3d 154 Gene3D G3DSA:1.10.10.10 5 135 7.1E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10720 e51b044b96eb9c22dd5fd3f880bb6b3d 154 PANTHER PTHR33221 6 132 1.4E-43 T 23-04-2016 MSIP34_RS10720 e51b044b96eb9c22dd5fd3f880bb6b3d 154 SUPERFAMILY SSF46785 6 135 1.75E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10720 e51b044b96eb9c22dd5fd3f880bb6b3d 154 PANTHER PTHR33221:SF4 6 132 1.4E-43 T 23-04-2016 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 PIRSF PIRSF029827 1 90 2.2E-40 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 1.0E-36 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 PANTHER PTHR36965 2 90 1.5E-43 T 23-04-2016 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 SUPERFAMILY SSF111148 1 89 1.7E-39 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 PANTHER PTHR36965:SF1 2 90 1.5E-43 T 23-04-2016 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 Gene3D G3DSA:1.10.3880.10 1 89 1.7E-41 T 23-04-2016 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.469 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 MSIP34_RS00890 334cee4dede57bf9b02974569c70fdb7 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.4E-43 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 SMART SM00382 55 183 2.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 330 8.2E-149 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 239 3.1E-119 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 257 330 1.1E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 SUPERFAMILY SSF46785 260 334 2.08E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 345 187.14 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 Gene3D G3DSA:1.10.10.10 261 332 3.2E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 Gene3D G3DSA:1.10.8.60 187 259 8.1E-34 T 23-04-2016 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 PANTHER PTHR13779:SF25 1 337 2.7E-185 T 23-04-2016 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 SUPERFAMILY SSF52540 24 255 4.46E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 331 6.0E-38 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 Gene3D G3DSA:3.40.50.300 24 179 1.3E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS12090 980c7d1e7a79adca2b3a40d07edee0cb 345 PANTHER PTHR13779 1 337 2.7E-185 T 23-04-2016 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 145 9.2E-9 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 259 294 3.1E-5 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 8.2E-7 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 258 6.5E-6 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 330 1.4E-114 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Gene3D G3DSA:2.160.10.10 117 296 1.7E-45 T 23-04-2016 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 PANTHER PTHR22572:SF117 99 296 8.9E-48 T 23-04-2016 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 PANTHER PTHR22572 99 296 8.9E-48 T 23-04-2016 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 89 1.3E-21 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 SUPERFAMILY SSF51161 35 317 1.52E-76 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS07120 3ed20a095e0430ed896130e765a45ef3 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 327 35.933 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 MSIP34_RS14150 3f20e5d101c419751e6f8dee5afd8672 283 PANTHER PTHR33375 7 280 4.4E-90 T 23-04-2016 MSIP34_RS14150 3f20e5d101c419751e6f8dee5afd8672 283 Pfam PF02195 ParB-like nuclease domain 31 119 2.3E-27 T 23-04-2016 IPR003115 ParB/Sulfiredoxin MSIP34_RS14150 3f20e5d101c419751e6f8dee5afd8672 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 28 203 4.6E-58 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 MSIP34_RS14150 3f20e5d101c419751e6f8dee5afd8672 283 SUPERFAMILY SSF110849 29 163 6.28E-34 T 23-04-2016 IPR003115 ParB/Sulfiredoxin MSIP34_RS14150 3f20e5d101c419751e6f8dee5afd8672 283 SMART SM00470 29 119 2.2E-35 T 23-04-2016 IPR003115 ParB/Sulfiredoxin MSIP34_RS14150 3f20e5d101c419751e6f8dee5afd8672 283 Gene3D G3DSA:3.90.1530.10 23 125 3.7E-40 T 23-04-2016 MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 SMART SM00382 35 221 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 SUPERFAMILY SSF52540 8 226 2.13E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 PANTHER PTHR24220:SF509 8 226 5.0E-97 T 23-04-2016 MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 Pfam PF00005 ABC transporter 27 172 2.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 PANTHER PTHR24220 8 226 5.0E-97 T 23-04-2016 MSIP34_RS08840 dedfda2b4ff28df3df3786e6ed6efe69 229 Gene3D G3DSA:3.40.50.300 11 225 4.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11170 276096d0987ee83106b3462662ac2fcb 210 Gene3D G3DSA:1.20.144.10 52 202 3.9E-16 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS11170 276096d0987ee83106b3462662ac2fcb 210 SUPERFAMILY SSF48317 13 206 6.02E-18 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS11170 276096d0987ee83106b3462662ac2fcb 210 Pfam PF01569 PAP2 superfamily 89 206 6.3E-12 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 PANTHER PTHR30093:SF9 25 161 4.3E-52 T 23-04-2016 MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 28 50 1.2E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 PANTHER PTHR30093 25 161 4.3E-52 T 23-04-2016 MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 31 51 1.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 Gene3D G3DSA:3.30.700.10 33 113 1.7E-9 T 23-04-2016 MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 32 57 1.0E-15 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 PRINTS PR00813 Bacterial general secretion pathway protein G signature 68 86 1.0E-15 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 SUPERFAMILY SSF54523 59 161 5.76E-37 T 23-04-2016 MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 Pfam PF08334 Type II secretion system (T2SS), protein G 56 161 8.3E-44 T 23-04-2016 IPR013545 Type II secretion system protein G MSIP34_RS05235 3d00a2ff03fb9d455bcea8e28a1ecab9 161 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 31 161 1.4E-53 T 23-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SUPERFAMILY SSF55785 143 261 1.06E-19 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 405 562 1.8E-50 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00267 394 566 6.3E-67 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00052 576 822 2.3E-117 T 23-04-2016 IPR001633 EAL domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00091 275 343 200.0 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00091 149 216 0.0088 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00091 28 93 250.0 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SUPERFAMILY SSF55785 259 387 6.63E-11 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SUPERFAMILY SSF55073 410 568 2.51E-52 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Gene3D G3DSA:3.30.450.20 32 141 4.9E-6 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 PANTHER PTHR10799:SF774 438 676 6.1E-89 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 PANTHER PTHR10799:SF774 222 352 6.1E-89 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 269 6.3E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Gene3D G3DSA:3.30.450.20 265 393 3.8E-11 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 PANTHER PTHR10799 438 676 6.1E-89 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 PANTHER PTHR10799 222 352 6.1E-89 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 401 564 8.8E-43 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00086 222 263 3.5 T 23-04-2016 IPR001610 PAC motif MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SMART SM00086 351 394 24.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Pfam PF08448 PAS fold 156 264 2.0E-16 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Pfam PF08448 PAS fold 284 395 4.9E-8 T 23-04-2016 IPR013656 PAS fold-4 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 SUPERFAMILY SSF141868 581 825 4.58E-90 T 23-04-2016 IPR001633 EAL domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Gene3D G3DSA:3.30.70.270 406 571 4.7E-57 T 23-04-2016 MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Gene3D G3DSA:3.20.20.450 580 826 5.1E-98 T 23-04-2016 IPR001633 EAL domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Pfam PF00563 EAL domain 583 817 1.1E-75 T 23-04-2016 IPR001633 EAL domain MSIP34_RS01905 dbfa6315654be63d954eacfbeec0d7f1 828 Gene3D G3DSA:3.30.450.20 143 261 1.2E-18 T 23-04-2016 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 275 3.0E-87 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 Gene3D G3DSA:3.10.310.10 123 264 2.4E-50 T 23-04-2016 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 Gene3D G3DSA:3.10.310.10 3 122 8.7E-50 T 23-04-2016 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 PANTHER PTHR31689 1 276 3.5E-123 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 37.763 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 Pfam PF01678 Diaminopimelate epimerase 5 125 4.4E-31 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 Pfam PF01678 Diaminopimelate epimerase 155 268 2.0E-29 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 PANTHER PTHR31689:SF0 1 276 3.5E-123 T 23-04-2016 MSIP34_RS00925 e460f6e9421ec427f169278a30e50e7d 276 SUPERFAMILY SSF54506 3 275 4.32E-55 T 23-04-2016 MSIP34_RS10795 d11d799a6911e8ec2c5f2345bab68cbc 66 Pfam PF10055 Uncharacterized small protein (DUF2292) 13 49 1.3E-18 T 23-04-2016 IPR018743 Protein of unknown function DUF2292 MSIP34_RS10880 38d95a0d485536656cf1ed7be85be8ea 162 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 133 2.5E-44 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS10880 38d95a0d485536656cf1ed7be85be8ea 162 Gene3D G3DSA:3.30.70.560 3 154 9.7E-55 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS10880 38d95a0d485536656cf1ed7be85be8ea 162 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 3.6E-37 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS10880 38d95a0d485536656cf1ed7be85be8ea 162 PANTHER PTHR20941 1 159 4.1E-61 T 23-04-2016 MSIP34_RS10880 38d95a0d485536656cf1ed7be85be8ea 162 SUPERFAMILY SSF55083 1 153 3.66E-52 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 30 476 2.8E-139 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 SUPERFAMILY SSF81442 18 529 3.92E-180 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 22 529 3.3E-207 T 23-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PANTHER PTHR10422 8 530 1.4E-301 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PANTHER PTHR10422:SF27 8 530 1.4E-301 T 23-04-2016 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 172 190 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 435 456 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 298 313 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 252 273 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 322 343 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 201 220 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 155 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 357 375 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 404 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 68 91 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 21 46 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 PRINTS PR01165 Cytochrome c oxidase subunit I signature 95 119 2.3E-108 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 254 308 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS06185 f80982520c969c0c5a0502519632451e 530 Gene3D G3DSA:1.20.210.10 9 529 2.7E-202 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Gene3D G3DSA:2.40.170.20 619 743 3.8E-88 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Gene3D G3DSA:2.40.170.20 497 498 3.8E-88 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Gene3D G3DSA:2.40.170.20 261 407 3.8E-88 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Gene3D G3DSA:2.40.170.20 886 1171 3.8E-88 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Gene3D G3DSA:2.40.170.20 799 848 3.8E-88 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Pfam PF00593 TonB dependent receptor 814 1144 3.3E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Gene3D G3DSA:2.170.130.10 120 260 1.2E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 258 1.4E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 SUPERFAMILY SSF56935 811 975 2.52E-76 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 SUPERFAMILY SSF56935 124 427 2.52E-76 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 SUPERFAMILY SSF56935 1074 1171 2.52E-76 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 SUPERFAMILY SSF56935 633 742 2.52E-76 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 SUPERFAMILY SSF56935 1004 1047 2.52E-76 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 1078 1133 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 619 745 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 55 411 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 1003 1043 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 800 848 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 1152 1171 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 PANTHER PTHR32552 877 986 3.4E-27 T 23-04-2016 MSIP34_RS04350 7facb8905b2d89c03908fa30e2e458d6 1370 SUPERFAMILY SSF54427 1235 1337 2.5E-7 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS11490 b97e5217508eefb3a0e0386434c69d52 197 PANTHER PTHR34478:SF2 1 197 1.0E-94 T 23-04-2016 MSIP34_RS11490 b97e5217508eefb3a0e0386434c69d52 197 SUPERFAMILY SSF140478 25 182 2.62E-55 T 23-04-2016 IPR023353 LemA-like domain MSIP34_RS11490 b97e5217508eefb3a0e0386434c69d52 197 PANTHER PTHR34478 1 197 1.0E-94 T 23-04-2016 MSIP34_RS11490 b97e5217508eefb3a0e0386434c69d52 197 Pfam PF04011 LemA family 11 195 1.5E-67 T 23-04-2016 IPR007156 LemA MSIP34_RS11490 b97e5217508eefb3a0e0386434c69d52 197 Gene3D G3DSA:1.20.1440.20 14 195 4.7E-66 T 23-04-2016 IPR023353 LemA-like domain MSIP34_RS08875 0e8e54597d2dc98b0623cbda49e38ef0 171 SUPERFAMILY SSF50341 29 166 2.22E-23 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS08875 0e8e54597d2dc98b0623cbda49e38ef0 171 SMART SM00260 26 161 3.8E-6 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS08875 0e8e54597d2dc98b0623cbda49e38ef0 171 Pfam PF01584 CheW-like domain 32 162 9.6E-22 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 Gene3D G3DSA:3.30.70.240 132 178 8.4E-8 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 SUPERFAMILY SSF54211 6 126 9.86E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 SUPERFAMILY SSF54980 132 180 3.74E-7 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 Pfam PF09186 Domain of unknown function (DUF1949) 137 179 7.2E-6 T 23-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 PANTHER PTHR16301 11 179 4.9E-43 T 23-04-2016 IPR023582 Impact family MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 Gene3D G3DSA:3.30.230.30 7 125 1.9E-37 T 23-04-2016 IPR001498 Impact, N-terminal MSIP34_RS07695 28f3a5490b7e12bc0c3a2e6844a829ea 188 Pfam PF01205 Uncharacterized protein family UPF0029 16 121 7.8E-25 T 23-04-2016 IPR001498 Impact, N-terminal MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 139 23.153 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 94 102 4.1E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 103 112 4.1E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 4.1E-11 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 138 6.7E-42 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 138 9.3E-37 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 SUPERFAMILY SSF81330 12 134 5.89E-37 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 PANTHER PTHR30266 1 139 1.1E-42 T 23-04-2016 MSIP34_RS10685 9a7bb32c097019ccc1fc14a6d6f125bd 139 PANTHER PTHR30266:SF2 1 139 1.1E-42 T 23-04-2016 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 Gene3D G3DSA:3.30.1390.10 54 126 2.5E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 Gene3D G3DSA:1.20.5.710 2 52 2.3E-20 T 23-04-2016 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 101 4.0E-14 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 SUPERFAMILY SSF48300 4 62 9.02E-17 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 2.7E-19 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 126 7.5E-48 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 126 25.446 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 5.7E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 MSIP34_RS01540 90880ed17d0d38cd1f5800ae13493e5e 126 SUPERFAMILY SSF54736 55 126 8.72E-25 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like MSIP34_RS00605 59a370976f8bc1a0f4001dcd6b5adb8b 397 Gene3D G3DSA:1.20.1250.20 7 186 5.9E-18 T 23-04-2016 MSIP34_RS00605 59a370976f8bc1a0f4001dcd6b5adb8b 397 Gene3D G3DSA:1.20.1250.20 204 380 3.3E-8 T 23-04-2016 MSIP34_RS00605 59a370976f8bc1a0f4001dcd6b5adb8b 397 PANTHER PTHR23501 9 351 1.7E-16 T 23-04-2016 MSIP34_RS00605 59a370976f8bc1a0f4001dcd6b5adb8b 397 SUPERFAMILY SSF103473 4 390 5.23E-36 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS00605 59a370976f8bc1a0f4001dcd6b5adb8b 397 Pfam PF07690 Major Facilitator Superfamily 15 339 1.8E-27 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS09605 7203a228359d608cb4e6ba1cf4519df9 576 SUPERFAMILY SSF53067 11 79 2.98E-17 T 23-04-2016 MSIP34_RS09605 7203a228359d608cb4e6ba1cf4519df9 576 SUPERFAMILY SSF53067 251 354 2.98E-17 T 23-04-2016 MSIP34_RS09605 7203a228359d608cb4e6ba1cf4519df9 576 SUPERFAMILY SSF53067 128 214 2.98E-17 T 23-04-2016 MSIP34_RS09605 7203a228359d608cb4e6ba1cf4519df9 576 PANTHER PTHR34847 2 574 3.2E-131 T 23-04-2016 MSIP34_RS09605 7203a228359d608cb4e6ba1cf4519df9 576 Pfam PF16861 Carbamoyltransferase C-terminus 402 571 1.9E-64 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal MSIP34_RS09605 7203a228359d608cb4e6ba1cf4519df9 576 Pfam PF02543 Carbamoyltransferase N-terminus 3 350 4.1E-55 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 MSIP34_RS07720 b1810dbdcd2202d2824ba6a4468647eb 264 Pfam PF01925 Sulfite exporter TauE/SafE 6 260 4.6E-44 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 MSIP34_RS07720 b1810dbdcd2202d2824ba6a4468647eb 264 PANTHER PTHR30269 1 264 2.8E-61 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 MSIP34_RS07720 b1810dbdcd2202d2824ba6a4468647eb 264 PANTHER PTHR30269:SF2 1 264 2.8E-61 T 23-04-2016 MSIP34_RS01020 b698b0b2fd2f1dd8a049a02b5bcd6e6a 176 SUPERFAMILY SSF52833 59 147 7.04E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01020 b698b0b2fd2f1dd8a049a02b5bcd6e6a 176 Pfam PF13511 Domain of unknown function (DUF4124) 10 49 3.4E-5 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 MSIP34_RS01020 b698b0b2fd2f1dd8a049a02b5bcd6e6a 176 Gene3D G3DSA:3.40.30.10 72 145 2.3E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 175 6.1E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 133 147 6.1E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 163 6.1E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 Gene3D G3DSA:1.10.10.10 133 190 1.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 Pfam PF00072 Response regulator receiver domain 5 97 7.8E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 ProSitePatterns PS00622 LuxR-type HTH domain signature. 147 174 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 187 4.8E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 SUPERFAMILY SSF52172 3 114 7.54E-24 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 Gene3D G3DSA:3.40.50.2300 2 132 8.8E-28 T 23-04-2016 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 SUPERFAMILY SSF46894 121 189 4.76E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 SMART SM00421 130 187 7.1E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 PANTHER PTHR26402 1 187 6.3E-65 T 23-04-2016 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 PANTHER PTHR26402:SF555 1 187 6.3E-65 T 23-04-2016 MSIP34_RS12385 cafc539e87413a4407ab3398f83c00b7 191 SMART SM00448 1 97 3.9E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PANTHER PTHR30295:SF9 1 156 9.5E-39 T 23-04-2016 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PIRSF PIRSF002560 1 158 3.2E-61 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 Pfam PF00210 Ferritin-like domain 9 142 1.3E-31 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PANTHER PTHR30295 1 156 9.5E-39 T 23-04-2016 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 Gene3D G3DSA:1.20.1260.10 1 157 1.8E-52 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PRINTS PR00601 Bacterioferritin signature 65 85 5.01E-53 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PRINTS PR00601 Bacterioferritin signature 3 22 5.01E-53 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PRINTS PR00601 Bacterioferritin signature 108 128 5.01E-53 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PRINTS PR00601 Bacterioferritin signature 23 43 5.01E-53 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PRINTS PR00601 Bacterioferritin signature 44 64 5.01E-53 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 PRINTS PR00601 Bacterioferritin signature 129 150 5.01E-53 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 SUPERFAMILY SSF47240 1 157 2.48E-43 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS10735 f0d46c4ace2fec24a2ca0663f05114d6 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.4E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 PANTHER PTHR13932:SF7 30 405 1.9E-171 T 23-04-2016 MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 SMART SM00729 31 249 4.6E-54 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 32 376 3.8E-109 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 PANTHER PTHR13932 30 405 1.9E-171 T 23-04-2016 MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 SUPERFAMILY SSF102114 29 403 1.83E-112 T 23-04-2016 MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 Pfam PF04055 Radical SAM superfamily 36 200 2.7E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 Gene3D G3DSA:3.80.30.20 32 262 4.7E-36 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe MSIP34_RS00220 c1c8d07b20e500ba7c5a7efa3d6a8f3a 405 Pfam PF06969 HemN C-terminal domain 329 391 1.4E-10 T 23-04-2016 IPR010723 HemN, C-terminal MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 SUPERFAMILY SSF53633 4 242 1.23E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 PIRSF PIRSF000726 57 407 2.2E-148 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 PANTHER PTHR21499:SF27 1 406 5.3E-174 T 23-04-2016 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 Pfam PF01842 ACT domain 268 324 4.7E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 Pfam PF00696 Amino acid kinase family 3 229 8.9E-50 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 SUPERFAMILY SSF55021 249 327 1.29E-19 T 23-04-2016 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 SUPERFAMILY SSF55021 332 405 2.62E-25 T 23-04-2016 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 2.6E-132 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 Gene3D G3DSA:3.40.1160.10 1 246 3.3E-76 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 Gene3D G3DSA:3.30.70.260 271 326 2.4E-4 T 23-04-2016 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 Pfam PF13840 ACT domain 338 400 1.8E-16 T 23-04-2016 IPR027795 GATS-like ACT domain MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 402 1.0E-118 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 MSIP34_RS11025 ee73a1830d5cf3af9de8dfe5860fff24 407 PANTHER PTHR21499 1 406 5.3E-174 T 23-04-2016 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 348 3.9E-77 T 23-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 Gene3D G3DSA:3.50.50.60 4 86 1.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 Gene3D G3DSA:3.50.50.60 306 361 1.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 Gene3D G3DSA:3.50.50.60 134 219 1.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 PANTHER PTHR13847 4 361 4.4E-66 T 23-04-2016 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 SUPERFAMILY SSF51971 291 350 1.65E-41 T 23-04-2016 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 SUPERFAMILY SSF51971 2 231 1.65E-41 T 23-04-2016 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 PANTHER PTHR13847:SF180 4 361 4.4E-66 T 23-04-2016 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 SUPERFAMILY SSF54373 218 306 5.23E-17 T 23-04-2016 MSIP34_RS01100 0f8d858c94fd8c18ca2cdfead38e5c6a 364 Pfam PF01266 FAD dependent oxidoreductase 5 345 7.1E-62 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 SMART SM00382 35 246 9.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 PANTHER PTHR24220:SF468 11 256 1.6E-134 T 23-04-2016 MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 PANTHER PTHR24220 11 256 1.6E-134 T 23-04-2016 MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 SUPERFAMILY SSF52540 12 245 4.19E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 Pfam PF00005 ABC transporter 26 184 4.8E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 259 2.7E-114 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS09420 0d61f7a341d6514679cc39f5ba823d06 259 Gene3D G3DSA:3.40.50.300 12 253 1.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07565 d56b30f37c58bd44d2fa0c8acc81a49c 478 Pfam PF02321 Outer membrane efflux protein 284 453 2.6E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS07565 d56b30f37c58bd44d2fa0c8acc81a49c 478 Pfam PF02321 Outer membrane efflux protein 81 247 3.7E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS07565 d56b30f37c58bd44d2fa0c8acc81a49c 478 Gene3D G3DSA:1.20.1600.10 74 454 1.7E-40 T 23-04-2016 MSIP34_RS07565 d56b30f37c58bd44d2fa0c8acc81a49c 478 PANTHER PTHR30203 75 477 5.5E-34 T 23-04-2016 MSIP34_RS07565 d56b30f37c58bd44d2fa0c8acc81a49c 478 SUPERFAMILY SSF56954 11 455 6.28E-55 T 23-04-2016 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 9.8E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 9.8E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 9.8E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 9.8E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 9.8E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 9.8E-25 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 3.4E-15 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 2.9E-22 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 Gene3D G3DSA:3.40.50.80 201 334 1.1E-37 T 23-04-2016 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 SUPERFAMILY SSF52343 201 334 7.73E-39 T 23-04-2016 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PANTHER PTHR19370:SF68 33 332 2.8E-68 T 23-04-2016 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PANTHER PTHR19370 33 332 2.8E-68 T 23-04-2016 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 2.9E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 2.9E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 2.9E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 2.9E-7 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 SUPERFAMILY SSF54292 1 89 7.6E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 Pfam PF00970 Oxidoreductase FAD-binding domain 105 198 8.1E-16 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 SUPERFAMILY SSF63380 102 198 6.45E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 Gene3D G3DSA:2.40.30.10 102 199 6.9E-30 T 23-04-2016 MSIP34_RS00150 7e4c047fa8883000b28d87512e427884 344 Gene3D G3DSA:3.10.20.30 2 91 5.6E-29 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SUPERFAMILY SSF48452 5 273 1.33E-57 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13424 Tetratricopeptide repeat 375 439 4.6E-8 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13424 Tetratricopeptide repeat 137 200 1.3E-7 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF14559 Tetratricopeptide repeat 14 71 3.9E-6 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF00515 Tetratricopeptide repeat 238 271 2.3E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF00515 Tetratricopeptide repeat 511 542 2.3E-7 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF00515 Tetratricopeptide repeat 476 509 7.4E-12 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13374 Tetratricopeptide repeat 546 567 0.0073 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Gene3D G3DSA:1.25.40.10 348 385 5.3E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 476 509 1.5E-10 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 374 407 0.0049 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 306 339 3.5E-8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 136 169 4.9E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 340 373 11.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 102 135 2.3E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 238 271 1.5E-7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 170 203 8.2E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 68 101 6.7E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 442 475 1.6E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 544 577 0.19 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 510 543 6.4E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 578 611 1.4E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 34 67 0.0015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 272 305 1.9E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 1 33 54.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 408 441 1.9E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SMART SM00028 204 237 6.8E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Gene3D G3DSA:1.25.40.10 3 237 5.5E-68 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Gene3D G3DSA:1.25.40.10 386 636 1.0E-73 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13414 TPR repeat 83 116 6.4E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13414 TPR repeat 279 319 3.2E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13414 TPR repeat 585 626 3.2E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13414 TPR repeat 320 349 5.6E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13181 Tetratricopeptide repeat 443 474 0.0035 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Pfam PF13181 Tetratricopeptide repeat 205 235 0.02 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 PANTHER PTHR23083:SF416 4 349 6.9E-138 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 PANTHER PTHR23083:SF416 384 637 6.9E-138 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Gene3D G3DSA:1.25.40.10 238 347 9.4E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SUPERFAMILY SSF48452 235 403 5.56E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 PANTHER PTHR23083 4 349 6.9E-138 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 PANTHER PTHR23083 384 637 6.9E-138 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SUPERFAMILY SSF53756 664 903 7.22E-17 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 Gene3D G3DSA:3.40.50.2000 839 903 3.4E-9 T 23-04-2016 MSIP34_RS04270 584921af0a8fc6b068c126ecef95dbfe 922 SUPERFAMILY SSF48452 443 637 5.82E-48 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05960 de3555b73aa18bda756966f0bd887e72 108 Gene3D G3DSA:2.60.120.10 3 89 2.2E-27 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS05960 de3555b73aa18bda756966f0bd887e72 108 Pfam PF05899 Protein of unknown function (DUF861) 17 88 1.7E-22 T 23-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 MSIP34_RS05960 de3555b73aa18bda756966f0bd887e72 108 PANTHER PTHR33271 4 96 2.9E-30 T 23-04-2016 MSIP34_RS05960 de3555b73aa18bda756966f0bd887e72 108 SUPERFAMILY SSF51182 19 88 6.9E-13 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS01820 01819e1462b23af04d5fb262606eacbe 439 Gene3D G3DSA:2.40.160.10 124 334 1.0E-5 T 23-04-2016 IPR023614 Porin domain MSIP34_RS01820 01819e1462b23af04d5fb262606eacbe 439 Pfam PF13372 Alginate export 52 419 1.5E-11 T 23-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 7.0E-169 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 Gene3D G3DSA:1.10.10.410 420 474 2.6E-5 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 SUPERFAMILY SSF89095 296 401 3.27E-33 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 PANTHER PTHR11659:SF0 2 474 5.3E-248 T 23-04-2016 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 PANTHER PTHR11659 2 474 5.3E-248 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.507 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 SUPERFAMILY SSF55931 4 295 3.6E-118 T 23-04-2016 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 Pfam PF02637 GatB domain 327 474 1.1E-55 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 SMART SM00845 327 474 1.3E-82 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 MSIP34_RS12725 ae3f1c3257307503557b1b0b2f51422e 476 Pfam PF02934 GatB/GatE catalytic domain 5 286 3.0E-112 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PANTHER PTHR22855 1 286 9.8E-158 T 23-04-2016 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 Gene3D G3DSA:3.90.226.10 21 281 1.5E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 Pfam PF01039 Carboxyl transferase domain 109 241 6.0E-14 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 1.9E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 1.9E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 1.9E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 1.9E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 1.9E-41 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 285 8.3E-128 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 283 38.547 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 PANTHER PTHR22855:SF17 1 286 9.8E-158 T 23-04-2016 MSIP34_RS07855 e5b92d8d616f70310c74783b6a01f769 288 SUPERFAMILY SSF52096 27 282 2.93E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 PANTHER PTHR21266:SF2 17 361 5.7E-42 T 23-04-2016 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 Gene3D G3DSA:3.90.380.10 139 360 1.1E-9 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 SUPERFAMILY SSF50022 6 141 9.56E-34 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 PANTHER PTHR21266 17 361 5.7E-42 T 23-04-2016 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 Pfam PF00355 Rieske [2Fe-2S] domain 46 119 6.0E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 SUPERFAMILY SSF55961 160 361 4.08E-36 T 23-04-2016 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 173 363 6.1E-34 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 MSIP34_RS07955 ed3906bb1d5e37bc9238d8008cd1cec4 367 Gene3D G3DSA:2.102.10.10 40 138 2.3E-24 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 Pfam PF01883 Domain of unknown function DUF59 6 78 2.0E-19 T 23-04-2016 IPR002744 Domain of unknown function DUF59 MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 SUPERFAMILY SSF117916 1 82 6.54E-15 T 23-04-2016 MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 338 4.2E-103 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 38.036 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 SUPERFAMILY SSF52540 89 324 1.23E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 PANTHER PTHR23264 1 355 4.7E-162 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 PANTHER PTHR23264:SF19 1 355 4.7E-162 T 23-04-2016 MSIP34_RS05600 67019b32aaa0627771972f5ddee5f381 362 Gene3D G3DSA:3.40.50.300 94 337 4.5E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10595 d1efc5e12fc32dc795e00057a79edb24 200 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 198 30.021 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 MSIP34_RS10595 d1efc5e12fc32dc795e00057a79edb24 200 Gene3D G3DSA:3.40.50.360 1 198 1.8E-63 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS10595 d1efc5e12fc32dc795e00057a79edb24 200 PANTHER PTHR10204 1 198 9.5E-68 T 23-04-2016 MSIP34_RS10595 d1efc5e12fc32dc795e00057a79edb24 200 Pfam PF02525 Flavodoxin-like fold 1 197 7.2E-46 T 23-04-2016 IPR003680 Flavodoxin-like fold MSIP34_RS10595 d1efc5e12fc32dc795e00057a79edb24 200 SUPERFAMILY SSF52218 1 198 3.11E-55 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS10595 d1efc5e12fc32dc795e00057a79edb24 200 PANTHER PTHR10204:SF16 1 198 9.5E-68 T 23-04-2016 MSIP34_RS04390 fd68f16862afcce84eb695da0099816f 104 Pfam PF04977 Septum formation initiator 11 90 2.6E-29 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 MSIP34_RS04390 fd68f16862afcce84eb695da0099816f 104 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.048 T 23-04-2016 IPR023081 Cell division protein FtsB MSIP34_RS04390 fd68f16862afcce84eb695da0099816f 104 PANTHER PTHR37485:SF1 2 101 8.4E-38 T 23-04-2016 MSIP34_RS04390 fd68f16862afcce84eb695da0099816f 104 PANTHER PTHR37485 2 101 8.4E-38 T 23-04-2016 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PRINTS PR01171 Bacterial lipocalin signature 137 148 1.5E-24 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PRINTS PR01171 Bacterial lipocalin signature 66 75 1.5E-24 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PRINTS PR01171 Bacterial lipocalin signature 30 44 1.5E-24 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PRINTS PR01171 Bacterial lipocalin signature 164 174 1.5E-24 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PRINTS PR01171 Bacterial lipocalin signature 47 63 1.5E-24 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PIRSF PIRSF036893 1 179 2.1E-44 T 23-04-2016 IPR022271 Lipocalin, ApoD type MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 Pfam PF08212 Lipocalin-like domain 30 175 1.3E-45 T 23-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 PANTHER PTHR10612 6 175 1.1E-47 T 23-04-2016 MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 Gene3D G3DSA:2.40.128.20 5 175 1.8E-52 T 23-04-2016 IPR012674 Calycin MSIP34_RS05780 a1e423abd0f1215e6dc410837ed4510f 179 SUPERFAMILY SSF50814 9 175 2.0E-46 T 23-04-2016 IPR011038 Calycin-like MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SMART SM00387 596 704 3.7E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PIRSF PIRSF037532 1 707 4.4E-231 T 23-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SUPERFAMILY SSF55874 552 702 4.71E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PANTHER PTHR24423:SF520 253 272 2.6E-59 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PANTHER PTHR24423:SF520 362 701 2.6E-59 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PANTHER PTHR24423:SF520 3 15 2.6E-59 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 Gene3D G3DSA:1.10.287.130 481 554 9.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 Pfam PF00672 HAMP domain 280 345 6.8E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PANTHER PTHR24423 253 272 2.6E-59 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PANTHER PTHR24423 362 701 2.6E-59 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PANTHER PTHR24423 3 15 2.6E-59 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 596 703 1.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 688 701 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 663 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 682 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 649 2.3E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SUPERFAMILY SSF55785 355 476 1.56E-7 T 23-04-2016 IPR000014 PAS domain MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SMART SM00304 298 350 2.9E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 Pfam PF00512 His Kinase A (phospho-acceptor) domain 487 555 5.4E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SUPERFAMILY SSF47384 481 555 4.51E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 Gene3D G3DSA:3.30.565.10 558 703 2.6E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SUPERFAMILY SSF158472 298 346 1.96E-9 T 23-04-2016 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 SMART SM00388 486 558 2.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS01000 15eede38bf8a5bbf98146b6b9cc24032 708 Gene3D G3DSA:3.30.450.20 360 476 4.5E-11 T 23-04-2016 MSIP34_RS00180 cb8add533a18938de84276ac514c846c 349 Gene3D G3DSA:3.30.565.10 207 289 1.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS00180 cb8add533a18938de84276ac514c846c 349 SUPERFAMILY SSF55874 211 319 2.01E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS00180 cb8add533a18938de84276ac514c846c 349 PANTHER PTHR34220:SF3 130 349 1.5E-51 T 23-04-2016 MSIP34_RS00180 cb8add533a18938de84276ac514c846c 349 Pfam PF06580 Histidine kinase 157 235 1.9E-22 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 MSIP34_RS00180 cb8add533a18938de84276ac514c846c 349 PANTHER PTHR34220 130 349 1.5E-51 T 23-04-2016 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 96 235 1.8E-17 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 SUPERFAMILY SSF58104 50 243 1.83E-25 T 23-04-2016 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 SMART SM00062 311 559 1.3E-15 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 Gene3D G3DSA:3.40.190.10 419 496 4.7E-5 T 23-04-2016 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 SMART SM00283 44 290 0.0045 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 SUPERFAMILY SSF53850 303 555 3.84E-26 T 23-04-2016 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 312 555 3.3E-15 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 Gene3D G3DSA:3.40.190.10 301 418 2.4E-15 T 23-04-2016 MSIP34_RS09700 4f3342d14a548c136108399b282ee811 589 Gene3D G3DSA:1.10.287.950 49 235 2.9E-25 T 23-04-2016 MSIP34_RS02140 35b8f7d16f531f33ca1acdbd074dc3d1 419 PANTHER PTHR34219:SF1 1 408 9.8E-71 T 23-04-2016 MSIP34_RS02140 35b8f7d16f531f33ca1acdbd074dc3d1 419 Pfam PF03929 PepSY-associated TM region 8 386 4.4E-50 T 23-04-2016 IPR005625 PepSY-associated TM protein MSIP34_RS02140 35b8f7d16f531f33ca1acdbd074dc3d1 419 PANTHER PTHR34219 1 408 9.8E-71 T 23-04-2016 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 3.3E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 3.3E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 3.3E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 3.3E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 3.3E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 8.5E-30 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 421 6.7E-166 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 227 404 4.0E-38 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 SUPERFAMILY SSF55681 116 422 3.55E-101 T 23-04-2016 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PANTHER PTHR11778 1 427 2.5E-206 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 PIRSF PIRSF001529 1 429 1.2E-178 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 Gene3D G3DSA:3.30.930.10 105 425 2.8E-143 T 23-04-2016 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 426 39.709 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 Gene3D G3DSA:1.10.287.40 1 104 2.5E-25 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 MSIP34_RS06080 c1b8500f6a24736780088734d1874be3 429 SUPERFAMILY SSF46589 1 112 2.77E-29 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 PANTHER PTHR12029 109 176 8.9E-25 T 23-04-2016 MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 PANTHER PTHR12029 10 89 8.9E-25 T 23-04-2016 MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 Pfam PF00588 SpoU rRNA Methylase family 11 165 9.7E-34 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 SUPERFAMILY SSF75217 10 198 1.31E-35 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 Gene3D G3DSA:3.40.1280.10 9 171 5.9E-32 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 8 245 1.7E-67 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 MSIP34_RS09330 686a1da632c532a10376202bf46d1f39 254 PIRSF PIRSF004808 5 251 1.1E-72 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 MSIP34_RS12745 f15fa95617f3a3dfb448ae744cbf8839 314 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 14 280 3.0E-53 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 MSIP34_RS12745 f15fa95617f3a3dfb448ae744cbf8839 314 PIRSF PIRSF038471 11 293 1.2E-74 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 MSIP34_RS12745 f15fa95617f3a3dfb448ae744cbf8839 314 PANTHER PTHR34138:SF1 10 278 8.8E-61 T 23-04-2016 MSIP34_RS12745 f15fa95617f3a3dfb448ae744cbf8839 314 PANTHER PTHR34138 10 278 8.8E-61 T 23-04-2016 MSIP34_RS12745 f15fa95617f3a3dfb448ae744cbf8839 314 Pfam PF04085 rod shape-determining protein MreC 138 278 3.1E-34 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 MSIP34_RS08695 c61311f3f52c4e0e1bf28442c711e7fa 413 Pfam PF04551 GcpE protein 1 384 5.7E-114 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 MSIP34_RS08695 c61311f3f52c4e0e1bf28442c711e7fa 413 PANTHER PTHR30454 1 393 6.0E-140 T 23-04-2016 MSIP34_RS08695 c61311f3f52c4e0e1bf28442c711e7fa 413 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 386 27.666 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 MSIP34_RS08695 c61311f3f52c4e0e1bf28442c711e7fa 413 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2 383 6.0E-116 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 MSIP34_RS08695 c61311f3f52c4e0e1bf28442c711e7fa 413 PIRSF PIRSF004640 1 394 3.5E-127 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 MSIP34_RS08695 c61311f3f52c4e0e1bf28442c711e7fa 413 SUPERFAMILY SSF56014 283 390 1.7E-6 T 23-04-2016 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 Gene3D G3DSA:3.40.50.720 4 155 1.2E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 PANTHER PTHR30525 4 393 1.8E-217 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 SUPERFAMILY SSF51735 6 155 9.44E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 Gene3D G3DSA:1.10.1740.10 314 393 7.1E-30 T 23-04-2016 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 137 7.6E-44 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 239 3.5E-38 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 SUPERFAMILY SSF55347 131 274 2.65E-62 T 23-04-2016 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 2.0E-42 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 SUPERFAMILY SSF69055 301 393 1.44E-31 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 392 47.522 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 8 391 1.1E-153 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS07140 2be50ff9263ea2bdac58d746382bde2b 397 PIRSF PIRSF006205 6 397 4.2E-154 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SUPERFAMILY SSF52540 6 288 1.35E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SUPERFAMILY SSF54980 409 486 3.96E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.1E-65 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Pfam PF00679 Elongation factor G C-terminus 605 690 4.9E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SMART SM00889 485 603 7.5E-72 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.6E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.6E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.6E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PRINTS PR00315 GTP-binding elongation factor signature 101 112 3.6E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.6E-15 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PANTHER PTHR23115 6 184 0.0 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PANTHER PTHR23115 308 696 0.0 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SMART SM00838 605 692 3.1E-56 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Gene3D G3DSA:3.30.70.240 604 690 4.3E-33 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Gene3D G3DSA:3.40.50.300 6 293 2.0E-102 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Pfam PF03764 Elongation factor G, domain IV 484 603 1.0E-46 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PANTHER PTHR23115:SF66 6 184 0.0 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SUPERFAMILY SSF54980 608 695 4.12E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SUPERFAMILY SSF54211 484 604 1.34E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 185 3.0E-30 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Pfam PF14492 Elongation Factor G, domain II 409 482 4.1E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 696 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 PANTHER PTHR23115:SF66 308 696 0.0 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Gene3D G3DSA:3.30.230.10 489 603 1.3E-51 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Pfam PF03144 Elongation factor Tu domain 2 329 396 7.8E-19 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Hamap MF_00054_B Elongation factor G [fusA]. 6 696 110.523 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 SUPERFAMILY SSF50447 271 407 7.95E-36 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Gene3D G3DSA:3.30.70.870 411 485 1.1E-39 T 23-04-2016 MSIP34_RS01565 d23d06456a07dc46fbae278eccd4443f 696 Gene3D G3DSA:2.40.30.10 310 410 9.5E-39 T 23-04-2016 MSIP34_RS00570 a5c39cf9bf7854a1487c2efc7f032777 268 PANTHER PTHR30151:SF8 6 266 1.5E-62 T 23-04-2016 MSIP34_RS00570 a5c39cf9bf7854a1487c2efc7f032777 268 SUPERFAMILY SSF161098 69 255 2.62E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS00570 a5c39cf9bf7854a1487c2efc7f032777 268 Gene3D G3DSA:1.10.3720.10 71 262 3.7E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS00570 a5c39cf9bf7854a1487c2efc7f032777 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 257 6.9E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS00570 a5c39cf9bf7854a1487c2efc7f032777 268 PANTHER PTHR30151 6 266 1.5E-62 T 23-04-2016 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 PANTHER PTHR18901 5 216 4.8E-89 T 23-04-2016 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 5 208 4.6E-52 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 67 184 2.4E-13 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 Gene3D G3DSA:3.40.50.1000 3 18 3.5E-42 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 Gene3D G3DSA:3.40.50.1000 80 215 3.5E-42 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 Gene3D G3DSA:1.10.150.240 19 79 3.2E-6 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 1.9E-35 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 PANTHER PTHR18901:SF24 5 216 4.8E-89 T 23-04-2016 MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 SUPERFAMILY SSF56784 3 215 4.01E-57 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS08505 080e3696c04ac7394b07121d2eed89e6 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 179 2.6E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS13590 99fde4d5cd32f487f1f5c1e49ec8732a 175 PANTHER PTHR22617 26 172 1.0E-43 T 23-04-2016 MSIP34_RS13590 99fde4d5cd32f487f1f5c1e49ec8732a 175 Gene3D G3DSA:2.30.30.40 103 158 5.6E-7 T 23-04-2016 MSIP34_RS13590 99fde4d5cd32f487f1f5c1e49ec8732a 175 Gene3D G3DSA:2.40.50.180 65 102 2.6E-7 T 23-04-2016 MSIP34_RS13590 99fde4d5cd32f487f1f5c1e49ec8732a 175 Pfam PF01584 CheW-like domain 27 165 2.2E-36 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13590 99fde4d5cd32f487f1f5c1e49ec8732a 175 SMART SM00260 23 164 2.0E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13590 99fde4d5cd32f487f1f5c1e49ec8732a 175 SUPERFAMILY SSF50341 24 167 6.15E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 PANTHER PTHR30158 4 383 6.8E-144 T 23-04-2016 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 Gene3D G3DSA:2.40.50.100 64 98 2.4E-20 T 23-04-2016 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 Gene3D G3DSA:2.40.50.100 173 207 2.4E-20 T 23-04-2016 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 294 1.2E-13 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 182 361 1.0E-8 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 PANTHER PTHR30158:SF7 4 383 6.8E-144 T 23-04-2016 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 7.5E-75 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS13630 f5e1de26466edaed11d1ca88442fe273 383 SUPERFAMILY SSF111369 52 300 2.75E-71 T 23-04-2016 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 PIRSF PIRSF001399 5 151 1.9E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 9 146 2.0E-57 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 SUPERFAMILY SSF52304 8 150 1.57E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 PANTHER PTHR21272 4 150 2.0E-83 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 151 69.807 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 Gene3D G3DSA:3.40.50.9100 8 150 4.7E-66 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 ProSitePatterns PS01029 Dehydroquinase class II signature. 12 29 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 Pfam PF01220 Dehydroquinase class II 8 145 7.4E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS00125 f67a778b337fe5edc79c9c220a15b0aa 151 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 9 147 2.8E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 MSIP34_RS06085 8601cf5d463cfe716d936f5ad776fbf2 584 Pfam PF00999 Sodium/hydrogen exchanger family 12 376 5.8E-62 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MSIP34_RS06085 8601cf5d463cfe716d936f5ad776fbf2 584 PANTHER PTHR16254 4 397 8.4E-111 T 23-04-2016 MSIP34_RS06135 3a76fa5bad40efafe689195d29039230 225 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 2 171 7.2E-17 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 MSIP34_RS06135 3a76fa5bad40efafe689195d29039230 225 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 180 3.0E-26 T 23-04-2016 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 MSIP34_RS06135 3a76fa5bad40efafe689195d29039230 225 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 172 3.9E-9 T 23-04-2016 MSIP34_RS06135 3a76fa5bad40efafe689195d29039230 225 Gene3D G3DSA:3.40.50.1000 67 207 9.4E-11 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06135 3a76fa5bad40efafe689195d29039230 225 Gene3D G3DSA:3.40.50.1000 3 18 9.4E-11 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06135 3a76fa5bad40efafe689195d29039230 225 SUPERFAMILY SSF56784 2 208 6.65E-40 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 Pfam PF12848 ABC transporter 224 305 1.3E-22 T 23-04-2016 IPR032781 ABC-transporter extension domain MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 SUPERFAMILY SSF52540 332 522 2.35E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 SUPERFAMILY SSF52540 6 237 1.24E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 Gene3D G3DSA:3.40.50.300 320 529 1.8E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 Pfam PF00005 ABC transporter 18 184 6.4E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 Pfam PF00005 ABC transporter 337 468 1.3E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 SMART SM00382 26 238 2.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 SMART SM00382 345 513 7.7E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 PANTHER PTHR19211:SF38 1 528 0.0 T 23-04-2016 MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 Gene3D G3DSA:3.40.50.300 5 281 9.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06225 688055192b647ef7a398184d20600be4 531 PANTHER PTHR19211 1 528 0.0 T 23-04-2016 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 Gene3D G3DSA:3.50.50.60 266 352 3.7E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 Gene3D G3DSA:3.50.50.60 5 180 3.7E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 SUPERFAMILY SSF51905 265 381 3.14E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 SUPERFAMILY SSF51905 5 172 3.14E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 PANTHER PTHR13789 4 385 5.3E-104 T 23-04-2016 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 3.2E-16 T 23-04-2016 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.2E-16 T 23-04-2016 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.2E-16 T 23-04-2016 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.2E-16 T 23-04-2016 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 385 4.2E-102 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 Pfam PF01494 FAD binding domain 5 336 8.6E-35 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 MSIP34_RS02965 727342cc07922ea3adeefe61828fd5bf 390 PANTHER PTHR13789:SF214 4 385 5.3E-104 T 23-04-2016 MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 PANTHER PTHR30353:SF6 1 302 2.2E-98 T 23-04-2016 MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 Gene3D G3DSA:3.40.250.10 202 306 2.0E-19 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 Pfam PF09335 SNARE associated Golgi protein 29 155 5.1E-12 T 23-04-2016 IPR032816 SNARE associated Golgi protein MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 Pfam PF00581 Rhodanese-like domain 207 300 5.1E-10 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 SMART SM00450 207 304 1.7E-9 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 PANTHER PTHR30353 1 302 2.2E-98 T 23-04-2016 IPR032818 DedA family MSIP34_RS13700 0d9b735c4183e9adcfbba6d793c8b9b3 307 SUPERFAMILY SSF52821 185 307 1.44E-23 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS00215 a3932fa6535a65193d6ac6f7d5045ca8 876 SUPERFAMILY SSF48452 312 411 1.08E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00215 a3932fa6535a65193d6ac6f7d5045ca8 876 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 535 856 1.5E-71 T 23-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 MSIP34_RS00215 a3932fa6535a65193d6ac6f7d5045ca8 876 Gene3D G3DSA:1.25.40.10 319 449 3.0E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11750 cdbb204443886dad3d1bdb8d1fc2d420 262 SUPERFAMILY SSF81296 156 258 6.58E-25 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS11750 cdbb204443886dad3d1bdb8d1fc2d420 262 Gene3D G3DSA:2.60.40.10 156 259 3.8E-30 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS11750 cdbb204443886dad3d1bdb8d1fc2d420 262 Pfam PF13501 Sulfur oxidation protein SoxY 32 140 3.7E-30 T 23-04-2016 IPR032711 Ig-like SoxY domain MSIP34_RS11750 cdbb204443886dad3d1bdb8d1fc2d420 262 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 27 253 1.4E-74 T 23-04-2016 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier MSIP34_RS11750 cdbb204443886dad3d1bdb8d1fc2d420 262 Pfam PF08770 Sulphur oxidation protein SoxZ 167 255 4.5E-26 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.938 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 PANTHER PTHR33343 1 63 7.7E-25 T 23-04-2016 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 SUPERFAMILY SSF143034 2 63 9.81E-24 T 23-04-2016 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 Pfam PF01632 Ribosomal protein L35 2 62 3.2E-26 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.1E-27 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.9E-19 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.9E-19 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03680 74d9378d63f859553eeb154502347899 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.9E-19 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Pfam PF05231 MASE1 31 286 7.2E-27 T 23-04-2016 IPR007895 MASE1 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SUPERFAMILY SSF55785 332 433 2.9E-15 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Pfam PF13426 PAS domain 574 676 2.4E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Pfam PF08447 PAS fold 461 549 9.4E-15 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SUPERFAMILY SSF55785 423 553 3.49E-18 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Gene3D G3DSA:3.30.450.20 559 671 4.2E-27 T 23-04-2016 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SUPERFAMILY SSF55073 693 850 4.47E-53 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Gene3D G3DSA:3.20.20.450 862 1111 7.0E-107 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SUPERFAMILY SSF55785 568 675 1.05E-26 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Pfam PF00563 EAL domain 865 1100 7.8E-80 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Gene3D G3DSA:3.30.450.20 302 419 3.1E-14 T 23-04-2016 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SUPERFAMILY SSF141868 864 1111 2.09E-96 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Pfam PF00989 PAS fold 313 419 5.6E-8 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 562 2.0E-12 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 326 433 4.7E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 566 684 8.5E-21 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 PANTHER PTHR10799 370 959 3.0E-95 T 23-04-2016 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Gene3D G3DSA:3.30.450.20 420 558 2.8E-26 T 23-04-2016 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00086 512 555 0.0018 T 23-04-2016 IPR001610 PAC motif MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00086 635 677 2.9E-4 T 23-04-2016 IPR001610 PAC motif MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00086 387 426 97.0 T 23-04-2016 IPR001610 PAC motif MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00052 859 1105 6.2E-127 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00267 677 849 3.2E-74 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Gene3D G3DSA:3.30.70.270 689 855 1.2E-59 T 23-04-2016 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 Pfam PF00990 Diguanylate cyclase, GGDEF domain 688 844 2.3E-53 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00091 438 506 1.9E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00091 311 380 0.057 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 SMART SM00091 563 629 7.0E-9 T 23-04-2016 IPR000014 PAS domain MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 PANTHER PTHR10799:SF774 370 959 3.0E-95 T 23-04-2016 MSIP34_RS09380 5f792c0edcdda0540c54517911d54dde 1126 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 684 847 1.3E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 5.6E-61 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.2E-43 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.2E-43 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.2E-43 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 2.2E-43 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.2E-43 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 SMART SM00846 3 151 1.0E-97 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PIRSF PIRSF000149 1 332 7.5E-133 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.7E-134 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 Gene3D G3DSA:3.40.50.720 3 159 1.3E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 Gene3D G3DSA:3.30.360.10 160 315 3.5E-81 T 23-04-2016 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 SUPERFAMILY SSF55347 150 313 1.31E-73 T 23-04-2016 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 PANTHER PTHR10836 1 332 4.6E-219 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 SUPERFAMILY SSF51735 1 179 2.99E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02465 0b38b05bbcd53a0d2a378bed3fdfe0fa 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 2.5E-68 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PANTHER PTHR30046:SF0 357 576 3.9E-165 T 23-04-2016 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PANTHER PTHR30046:SF0 24 331 3.9E-165 T 23-04-2016 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 Pfam PF01514 Secretory protein of YscJ/FliF family 34 223 3.0E-78 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 25 575 4.2E-133 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PANTHER PTHR30046 357 576 3.9E-165 T 23-04-2016 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PANTHER PTHR30046 24 331 3.9E-165 T 23-04-2016 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 Pfam PF08345 Flagellar M-ring protein C-terminal 258 450 8.5E-46 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PIRSF PIRSF004862 15 576 7.8E-147 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PRINTS PR01009 Flagellar M-ring protein signature 374 398 3.5E-38 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PRINTS PR01009 Flagellar M-ring protein signature 199 217 3.5E-38 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PRINTS PR01009 Flagellar M-ring protein signature 124 142 3.5E-38 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PRINTS PR01009 Flagellar M-ring protein signature 156 170 3.5E-38 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS03865 17191ead6a384db81ef155a461036530 576 PRINTS PR01009 Flagellar M-ring protein signature 270 288 3.5E-38 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 SUPERFAMILY SSF53633 10 259 9.43E-73 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.6E-52 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 3.6E-52 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 3.6E-52 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 3.6E-52 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 3.6E-52 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 SMART SM00359 281 364 2.5E-17 T 23-04-2016 IPR002478 PUA domain GO:0003723 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 Pfam PF01472 PUA domain 281 355 7.8E-23 T 23-04-2016 IPR002478 PUA domain GO:0003723 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 Pfam PF00696 Amino acid kinase family 10 238 1.5E-47 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 SUPERFAMILY SSF88697 281 371 2.93E-24 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 Gene3D G3DSA:2.30.130.10 279 369 3.0E-28 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PANTHER PTHR11063:SF6 11 372 8.2E-119 T 23-04-2016 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.51 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PANTHER PTHR11063 11 372 8.2E-119 T 23-04-2016 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 PIRSF PIRSF000729 5 372 1.2E-134 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 11 370 1.7E-136 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 MSIP34_RS02625 fb34a4c159c28964ceaf002442789a65 372 Gene3D G3DSA:3.40.1160.10 10 258 1.1E-61 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS05950 7ec5afc770af4d197dbcca2021064226 153 Gene3D G3DSA:1.10.3100.10 1 117 1.9E-30 T 23-04-2016 IPR027910 YdiL-like domain MSIP34_RS05950 7ec5afc770af4d197dbcca2021064226 153 SUPERFAMILY SSF47413 1 71 6.19E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS05950 7ec5afc770af4d197dbcca2021064226 153 Pfam PF08965 Domain of unknown function (DUF1870) 1 115 5.2E-40 T 23-04-2016 IPR015060 Protein of unknown function DUF1870 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 PANTHER PTHR30173:SF9 10 161 5.7E-40 T 23-04-2016 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 Gene3D G3DSA:1.10.1740.10 10 77 1.9E-12 T 23-04-2016 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 Gene3D G3DSA:1.10.10.10 106 160 7.6E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 161 1.0E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 SUPERFAMILY SSF88659 102 161 4.58E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 Pfam PF04542 Sigma-70 region 2 13 77 3.0E-13 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 Pfam PF08281 Sigma-70, region 4 109 161 7.9E-17 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 SUPERFAMILY SSF88946 11 98 5.89E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04115 c16c31b6a26bace16f34df402e992a91 166 PANTHER PTHR30173 10 161 5.7E-40 T 23-04-2016 MSIP34_RS11410 7f4850d4b4113d42adfb8a441577c2b7 150 PANTHER PTHR35603 1 149 5.3E-34 T 23-04-2016 MSIP34_RS11410 7f4850d4b4113d42adfb8a441577c2b7 150 Pfam PF05433 Glycine zipper 2TM domain 59 99 2.4E-8 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 SUPERFAMILY SSF53850 23 249 6.52E-63 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 Gene3D G3DSA:3.40.190.10 24 105 3.4E-18 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 Gene3D G3DSA:3.40.190.10 211 249 3.4E-18 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 PANTHER PTHR30632 7 250 1.2E-60 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 PANTHER PTHR30632:SF0 7 250 1.2E-60 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 Pfam PF13531 Bacterial extracellular solute-binding protein 25 247 4.0E-47 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 Gene3D G3DSA:3.40.190.10 106 210 1.5E-36 T 23-04-2016 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 PIRSF PIRSF004846 2 250 4.6E-67 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 MSIP34_RS11705 77ba015b09787b082b4b2953dfb04604 251 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 30 246 1.7E-62 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 SMART SM00490 495 579 2.6E-19 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 PANTHER PTHR24031:SF249 289 593 3.8E-123 T 23-04-2016 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 PANTHER PTHR24031:SF249 616 682 3.8E-123 T 23-04-2016 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 SUPERFAMILY SSF52540 498 642 4.89E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 SUPERFAMILY SSF52540 280 332 4.89E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 PANTHER PTHR24031:SF249 259 272 3.8E-123 T 23-04-2016 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 SMART SM00487 255 450 3.2E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 Gene3D G3DSA:3.40.50.300 445 627 2.3E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 Gene3D G3DSA:3.40.50.300 243 444 1.0E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 PANTHER PTHR24031 259 272 3.8E-123 T 23-04-2016 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 Pfam PF17191 RecG wedge domain 16 162 6.0E-16 T 23-04-2016 IPR033454 RecG, wedge domain MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 Pfam PF00270 DEAD/DEAH box helicase 280 424 1.4E-18 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 SUPERFAMILY SSF52540 187 444 1.44E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 Pfam PF00271 Helicase conserved C-terminal domain 471 578 2.4E-17 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 SUPERFAMILY SSF50249 3 165 2.74E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 Gene3D G3DSA:2.40.50.140 41 132 1.7E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 21 654 3.5E-218 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 PANTHER PTHR24031 289 593 3.8E-123 T 23-04-2016 MSIP34_RS00275 04c5e31646e8407f0a207c81161624ee 683 PANTHER PTHR24031 616 682 3.8E-123 T 23-04-2016 MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 PANTHER PTHR32125 5 235 6.1E-70 T 23-04-2016 MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 232 30.652 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 PANTHER PTHR32125:SF4 5 235 6.1E-70 T 23-04-2016 MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 230 2.6E-66 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 SUPERFAMILY SSF53448 5 229 4.51E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 Gene3D G3DSA:3.90.550.10 2 233 1.4E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06020 19b8d8c27422c7cba3ad0dcd2de737f0 239 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 229 7.5E-69 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS01535 333bacbe9cb41917133508a9a393969b 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.054 T 23-04-2016 IPR022973 Ribosomal protein L10 MSIP34_RS01535 333bacbe9cb41917133508a9a393969b 174 PANTHER PTHR11560 3 172 3.0E-54 T 23-04-2016 MSIP34_RS01535 333bacbe9cb41917133508a9a393969b 174 Pfam PF00466 Ribosomal protein L10 5 100 4.0E-24 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 MSIP34_RS01535 333bacbe9cb41917133508a9a393969b 174 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 143 7.0E-5 T 23-04-2016 MSIP34_RS01535 333bacbe9cb41917133508a9a393969b 174 SUPERFAMILY SSF160369 4 171 2.09E-56 T 23-04-2016 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 PANTHER PTHR22939:SF79 35 181 1.2E-18 T 23-04-2016 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 PANTHER PTHR22939 35 181 1.2E-18 T 23-04-2016 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 PRINTS PR00834 HtrA/DegQ protease family signature 79 99 6.6E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 PRINTS PR00834 HtrA/DegQ protease family signature 59 71 6.6E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 PRINTS PR00834 HtrA/DegQ protease family signature 172 189 6.6E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 PRINTS PR00834 HtrA/DegQ protease family signature 150 167 6.6E-5 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 Gene3D G3DSA:2.40.10.10 117 205 3.2E-16 T 23-04-2016 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 SUPERFAMILY SSF50494 5 203 1.23E-34 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 SUPERFAMILY SSF48452 222 328 6.48E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 Gene3D G3DSA:1.25.40.10 222 325 1.6E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 Gene3D G3DSA:2.40.10.10 46 116 1.2E-14 T 23-04-2016 MSIP34_RS13785 c2d27851222c046a98c1a4c6e042b2a7 339 Pfam PF13365 Trypsin-like peptidase domain 51 179 5.3E-26 T 23-04-2016 MSIP34_RS00850 e40e884698a3d8f12276c41b626f4fb6 153 Gene3D G3DSA:3.10.590.10 1 151 6.2E-32 T 23-04-2016 IPR002740 EVE domain MSIP34_RS00850 e40e884698a3d8f12276c41b626f4fb6 153 SUPERFAMILY SSF88697 1 152 2.15E-57 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS00850 e40e884698a3d8f12276c41b626f4fb6 153 Pfam PF01878 EVE domain 2 150 1.0E-51 T 23-04-2016 IPR002740 EVE domain MSIP34_RS00850 e40e884698a3d8f12276c41b626f4fb6 153 PANTHER PTHR14087 1 150 2.9E-72 T 23-04-2016 MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 Pfam PF00482 Type II secretion system (T2SS), protein F 65 188 1.0E-22 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 Pfam PF00482 Type II secretion system (T2SS), protein F 269 390 1.2E-25 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 PANTHER PTHR30012 2 400 5.5E-115 T 23-04-2016 MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 PANTHER PTHR30012:SF0 2 400 5.5E-115 T 23-04-2016 MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 61 73 2.8E-11 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 364 378 2.8E-11 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 160 188 2.8E-11 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS00455 7b4ebe8098839270208a137a86c66355 401 PRINTS PR00812 Bacterial general secretion pathway protein F signature 380 399 2.8E-11 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 PANTHER PTHR21294:SF0 1 262 3.9E-73 T 23-04-2016 MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 SUPERFAMILY SSF52402 1 261 2.51E-66 T 23-04-2016 MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 Pfam PF01012 Electron transfer flavoprotein domain 33 213 9.4E-40 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 Gene3D G3DSA:3.40.50.620 1 262 4.6E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 SMART SM00893 23 218 1.0E-42 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 PIRSF PIRSF000090 1 265 1.0E-73 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 PANTHER PTHR21294 1 262 3.9E-73 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 MSIP34_RS12350 37d17a2a6ab7e02810bc2543e895feb9 267 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 161 182 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 MSIP34_RS08575 539e5a965ee06e38475aaf4510a0919d 80 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.765 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MSIP34_RS08575 539e5a965ee06e38475aaf4510a0919d 80 Gene3D G3DSA:2.30.30.100 1 71 1.0E-36 T 23-04-2016 MSIP34_RS08575 539e5a965ee06e38475aaf4510a0919d 80 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 65 8.5E-29 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 MSIP34_RS08575 539e5a965ee06e38475aaf4510a0919d 80 SUPERFAMILY SSF50182 8 70 7.36E-24 T 23-04-2016 IPR010920 LSM domain MSIP34_RS08575 539e5a965ee06e38475aaf4510a0919d 80 PANTHER PTHR34772:SF1 2 71 2.4E-34 T 23-04-2016 MSIP34_RS08575 539e5a965ee06e38475aaf4510a0919d 80 PANTHER PTHR34772 2 71 2.4E-34 T 23-04-2016 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 Pfam PF01553 Acyltransferase 71 182 7.5E-23 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 SMART SM00563 73 185 2.1E-32 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 PANTHER PTHR10434:SF8 210 249 2.1E-41 T 23-04-2016 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 PANTHER PTHR10434:SF8 11 194 2.1E-41 T 23-04-2016 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 PANTHER PTHR10434 11 194 2.1E-41 T 23-04-2016 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 SUPERFAMILY SSF69593 19 248 5.89E-31 T 23-04-2016 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 Gene3D G3DSA:3.40.1130.10 72 168 2.5E-10 T 23-04-2016 MSIP34_RS11420 ad923bdc19a178ca15c698ff08b795f2 252 PANTHER PTHR10434 210 249 2.1E-41 T 23-04-2016 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PRINTS PR00175 Sodium/alanine symporter signature 347 369 7.1E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PRINTS PR00175 Sodium/alanine symporter signature 406 426 7.1E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PRINTS PR00175 Sodium/alanine symporter signature 208 227 7.1E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PRINTS PR00175 Sodium/alanine symporter signature 90 112 7.1E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PRINTS PR00175 Sodium/alanine symporter signature 303 321 7.1E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PRINTS PR00175 Sodium/alanine symporter signature 180 198 7.1E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PANTHER PTHR30330 1 440 4.3E-207 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 PANTHER PTHR30330:SF3 1 440 4.3E-207 T 23-04-2016 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 437 8.7E-161 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS01935 e19947ff6bbdc927edf8fb5a1a8407e2 440 Pfam PF01235 Sodium:alanine symporter family 51 439 1.5E-141 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 Pfam PF10411 Disulfide bond isomerase protein N-terminus 26 80 9.4E-16 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 SUPERFAMILY SSF54423 23 81 1.26E-7 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 SUPERFAMILY SSF52833 89 233 4.29E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 Gene3D G3DSA:3.40.30.10 105 236 2.6E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 Pfam PF13098 Thioredoxin-like domain 108 232 2.6E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 Gene3D G3DSA:3.10.450.70 21 84 2.8E-12 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal MSIP34_RS02975 ed19b924619cfc2f39af110e32c4ac81 240 PANTHER PTHR35272 1 238 5.8E-37 T 23-04-2016 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 Gene3D G3DSA:3.10.290.10 32 80 3.5E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 Pfam PF01479 S4 domain 32 78 5.1E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 PANTHER PTHR11079 22 333 1.7E-120 T 23-04-2016 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 150 164 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 Pfam PF00849 RNA pseudouridylate synthase 112 260 2.6E-29 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 SUPERFAMILY SSF55120 98 324 1.01E-58 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 SUPERFAMILY SSF55174 31 83 2.49E-8 T 23-04-2016 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 28 323 3.6E-79 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 PANTHER PTHR11079:SF84 22 333 1.7E-120 T 23-04-2016 MSIP34_RS06450 66dfad4d1a167d98b5da2aa54119a301 333 SMART SM00363 32 95 1.4E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS01870 554ef448fc5f2769b9c1191f990c4d1a 103 Pfam PF10985 Protein of unknown function (DUF2805) 30 97 3.2E-33 T 23-04-2016 IPR019882 Conserved hypothetical protein CHP03643 MSIP34_RS01870 554ef448fc5f2769b9c1191f990c4d1a 103 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 28 95 1.7E-33 T 23-04-2016 IPR019882 Conserved hypothetical protein CHP03643 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 SUPERFAMILY SSF55174 210 307 1.15E-18 T 23-04-2016 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 SUPERFAMILY SSF55120 270 446 5.92E-38 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 Pfam PF01479 S4 domain 210 253 4.9E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 PANTHER PTHR21600:SF25 314 446 1.1E-68 T 23-04-2016 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 PANTHER PTHR21600 210 283 1.1E-68 T 23-04-2016 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 PANTHER PTHR21600 314 446 1.1E-68 T 23-04-2016 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 Pfam PF00849 RNA pseudouridylate synthase 271 366 1.8E-8 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 306 443 5.5E-40 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 SMART SM00363 209 266 1.8E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 PANTHER PTHR21600:SF25 210 283 1.1E-68 T 23-04-2016 MSIP34_RS13125 88f30e27a36f26a07a0ef7d6089a0fd8 448 Gene3D G3DSA:3.10.290.10 210 260 3.7E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 Pfam PF13616 PPIC-type PPIASE domain 128 223 8.9E-25 T 23-04-2016 MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 PANTHER PTHR10657:SF11 3 260 6.7E-41 T 23-04-2016 MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 PANTHER PTHR10657 3 260 6.7E-41 T 23-04-2016 MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 SUPERFAMILY SSF109998 24 161 4.71E-19 T 23-04-2016 IPR027304 Trigger factor/SurA domain MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 Pfam PF13624 SurA N-terminal domain 8 95 1.8E-6 T 23-04-2016 MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 Gene3D G3DSA:3.10.50.40 127 246 9.5E-44 T 23-04-2016 MSIP34_RS04660 dff1d9227d20342dbb05a85f1f6281db 267 SUPERFAMILY SSF54534 117 222 5.23E-31 T 23-04-2016 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 SMART SM00382 379 566 1.7E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 Gene3D G3DSA:1.20.1560.10 13 331 7.9E-21 T 23-04-2016 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 Pfam PF00664 ABC transporter transmembrane region 73 275 1.3E-6 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 PANTHER PTHR24221 6 579 4.0E-97 T 23-04-2016 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 Pfam PF00005 ABC transporter 371 521 4.5E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 SUPERFAMILY SSF90123 12 337 3.01E-29 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 Gene3D G3DSA:3.40.50.300 354 581 3.0E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 PANTHER PTHR24221:SF138 6 579 4.0E-97 T 23-04-2016 MSIP34_RS00715 1b6c4040b1ad11a3979e36ea726e4376 585 SUPERFAMILY SSF52540 347 580 5.44E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06070 d24b891908b07f9b7882182d4746c13e 209 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 11 206 2.3E-24 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 MSIP34_RS06070 d24b891908b07f9b7882182d4746c13e 209 SUPERFAMILY SSF89392 29 207 5.49E-49 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX MSIP34_RS06070 d24b891908b07f9b7882182d4746c13e 209 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 209 31.093 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 MSIP34_RS06070 d24b891908b07f9b7882182d4746c13e 209 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 38 198 1.6E-51 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like MSIP34_RS06070 d24b891908b07f9b7882182d4746c13e 209 Gene3D G3DSA:2.50.20.10 29 207 2.3E-64 T 23-04-2016 MSIP34_RS06070 d24b891908b07f9b7882182d4746c13e 209 PANTHER PTHR35869 1 209 2.5E-47 T 23-04-2016 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 424 2.2E-187 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 PANTHER PTHR11986:SF5 2 428 5.4E-218 T 23-04-2016 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 4 426 102.723 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 PANTHER PTHR11986 2 428 5.4E-218 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 SUPERFAMILY SSF53383 3 423 1.43E-130 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 Gene3D G3DSA:3.90.1150.10 320 424 8.0E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 Gene3D G3DSA:3.90.1150.10 2 70 8.0E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 Pfam PF00202 Aminotransferase class-III 33 396 3.5E-76 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 271 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS14045 e61644c781d85b9bfdb037265dd45621 428 Gene3D G3DSA:3.40.640.10 71 317 1.2E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS04010 e0d53bf1d829c916bdb1ff2a78122f62 313 SUPERFAMILY SSF103088 118 248 1.44E-30 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS04010 e0d53bf1d829c916bdb1ff2a78122f62 313 PANTHER PTHR30329 1 272 1.4E-72 T 23-04-2016 MSIP34_RS04010 e0d53bf1d829c916bdb1ff2a78122f62 313 Gene3D G3DSA:3.30.1330.60 123 248 7.8E-35 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS04010 e0d53bf1d829c916bdb1ff2a78122f62 313 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 56 1.6E-22 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain MSIP34_RS04010 e0d53bf1d829c916bdb1ff2a78122f62 313 Pfam PF00691 OmpA family 144 242 1.0E-23 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS04010 e0d53bf1d829c916bdb1ff2a78122f62 313 PANTHER PTHR30329:SF4 1 272 1.4E-72 T 23-04-2016 MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 220 8.7E-61 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 Gene3D G3DSA:3.40.50.150 23 220 8.9E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 141 156 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 11 221 34.45 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 PANTHER PTHR11579 5 219 9.9E-70 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 16 219 1.6E-57 T 23-04-2016 MSIP34_RS05020 4767a81afea4ecc3af3e81494b59c249 222 SUPERFAMILY SSF53335 14 220 3.22E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS10125 436c67525b01b35af232e42cffb824ec 248 PANTHER PTHR30294:SF5 2 237 8.9E-30 T 23-04-2016 MSIP34_RS10125 436c67525b01b35af232e42cffb824ec 248 Pfam PF12679 ABC-2 family transporter protein 4 236 4.5E-12 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 MSIP34_RS10125 436c67525b01b35af232e42cffb824ec 248 PANTHER PTHR30294 2 237 8.9E-30 T 23-04-2016 MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 Pfam PF03938 Outer membrane protein (OmpH-like) 15 169 2.7E-32 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 SUPERFAMILY SSF111384 28 169 1.26E-33 T 23-04-2016 IPR024930 Skp domain MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 PANTHER PTHR35089:SF1 8 172 7.1E-36 T 23-04-2016 MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 PANTHER PTHR35089 8 172 7.1E-36 T 23-04-2016 MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 Gene3D G3DSA:3.30.910.20 18 170 5.3E-33 T 23-04-2016 MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 SMART SM00935 17 170 8.2E-52 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 MSIP34_RS07125 9f4aaba36c4df39a94eb633c0dc94994 172 PIRSF PIRSF002094 4 172 7.8E-58 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 Gene3D G3DSA:3.40.30.10 1 73 9.6E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 Pfam PF00462 Glutaredoxin 4 63 1.1E-20 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 SUPERFAMILY SSF52833 1 82 5.37E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.2E-34 T 23-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 PANTHER PTHR10168 3 82 2.5E-23 T 23-04-2016 MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 PRINTS PR00160 Glutaredoxin signature 4 22 1.8E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 PRINTS PR00160 Glutaredoxin signature 46 59 1.8E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup MSIP34_RS02815 3b58719ba4f549ad5ffa47d159075c0f 87 PRINTS PR00160 Glutaredoxin signature 60 73 1.8E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 163 300 1.5E-21 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 196 217 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 176 194 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 152 175 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 29 52 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 54 74 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 7 27 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 283 301 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 218 239 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PRINTS PR01002 Flagellar protein FlgJ signature 240 261 3.9E-53 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PANTHER PTHR33308:SF3 15 299 4.6E-26 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 300 4.1E-100 T 23-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 SMART SM00047 147 301 3.7E-33 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 PANTHER PTHR33308 15 299 4.6E-26 T 23-04-2016 MSIP34_RS03940 6643a98df313917b54e6870d2317e7f7 303 Pfam PF10135 Rod binding protein 51 97 4.3E-16 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 Pfam PF00140 Sigma-70 factor, region 1.2 14 43 3.8E-9 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 Gene3D G3DSA:1.10.601.10 11 122 3.6E-38 T 23-04-2016 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 Gene3D G3DSA:1.10.10.10 224 281 5.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 SUPERFAMILY SSF88659 189 281 6.92E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 PRINTS PR00046 Major sigma-70 factor signature 266 277 1.3E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 1.3E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 PRINTS PR00046 Major sigma-70 factor signature 251 266 1.3E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 PRINTS PR00046 Major sigma-70 factor signature 231 243 1.3E-18 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 1.2E-30 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 6.5E-125 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 283 51.701 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 Pfam PF04542 Sigma-70 region 2 53 122 9.1E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 SUPERFAMILY SSF88946 12 122 1.88E-40 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 251 277 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 PIRSF PIRSF000770 7 284 3.7E-35 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 PANTHER PTHR30376 2 278 3.1E-104 T 23-04-2016 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS10065 6f468b6d69365940f1ee0a94bd74be61 284 Pfam PF04545 Sigma-70, region 4 227 278 2.2E-14 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04990 19da154fac0435df0ce80c9ce71e7131 191 PANTHER PTHR34406 1 190 1.0E-46 T 23-04-2016 MSIP34_RS04990 19da154fac0435df0ce80c9ce71e7131 191 SUPERFAMILY SSF101874 23 190 4.97E-48 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS04990 19da154fac0435df0ce80c9ce71e7131 191 Gene3D G3DSA:2.40.128.110 22 190 2.1E-50 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS04990 19da154fac0435df0ce80c9ce71e7131 191 Pfam PF04264 YceI-like domain 24 185 3.8E-35 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS04990 19da154fac0435df0ce80c9ce71e7131 191 PANTHER PTHR34406:SF1 1 190 1.0E-46 T 23-04-2016 MSIP34_RS04990 19da154fac0435df0ce80c9ce71e7131 191 SMART SM00867 23 188 3.1E-56 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like MSIP34_RS05640 d235889e8fe021d342491adf57e87153 225 Hamap MF_00238 Cytidylate kinase [cmk]. 4 218 31.999 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 MSIP34_RS05640 d235889e8fe021d342491adf57e87153 225 Pfam PF02224 Cytidylate kinase 6 215 3.6E-72 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 MSIP34_RS05640 d235889e8fe021d342491adf57e87153 225 Gene3D G3DSA:3.40.50.300 4 215 3.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05640 d235889e8fe021d342491adf57e87153 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 213 2.1E-74 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 MSIP34_RS05640 d235889e8fe021d342491adf57e87153 225 PANTHER PTHR21299 1 225 9.4E-64 T 23-04-2016 MSIP34_RS05640 d235889e8fe021d342491adf57e87153 225 SUPERFAMILY SSF52540 4 216 1.73E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03235 4af87688403557df6c446eda06a9d032 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 135 9.7E-26 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 MSIP34_RS03235 4af87688403557df6c446eda06a9d032 140 PANTHER PTHR30558 1 140 7.3E-32 T 23-04-2016 MSIP34_RS03235 4af87688403557df6c446eda06a9d032 140 PANTHER PTHR30558:SF5 1 140 7.3E-32 T 23-04-2016 MSIP34_RS05730 b1343d7f139accb144b4cfda81a02768 188 PANTHER PTHR30295:SF1 19 182 1.9E-49 T 23-04-2016 MSIP34_RS05730 b1343d7f139accb144b4cfda81a02768 188 PANTHER PTHR30295 19 182 1.9E-49 T 23-04-2016 MSIP34_RS05730 b1343d7f139accb144b4cfda81a02768 188 PIRSF PIRSF018063 21 187 3.1E-57 T 23-04-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold MSIP34_RS05730 b1343d7f139accb144b4cfda81a02768 188 SUPERFAMILY SSF47240 40 183 4.67E-40 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS05730 b1343d7f139accb144b4cfda81a02768 188 Gene3D G3DSA:1.20.1260.10 38 183 5.9E-50 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS05730 b1343d7f139accb144b4cfda81a02768 188 Pfam PF00210 Ferritin-like domain 47 183 7.3E-32 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MSIP34_RS03985 2a25e17d8a7e4d01210e7089ecf10d26 242 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 106 240 8.1E-39 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal MSIP34_RS03985 2a25e17d8a7e4d01210e7089ecf10d26 242 Pfam PF13144 Chaperone for flagella basal body P-ring formation 43 240 8.0E-57 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal MSIP34_RS03985 2a25e17d8a7e4d01210e7089ecf10d26 242 PANTHER PTHR36307 90 240 2.0E-23 T 23-04-2016 MSIP34_RS03985 2a25e17d8a7e4d01210e7089ecf10d26 242 SMART SM00858 118 180 1.4E-10 T 23-04-2016 IPR013974 SAF domain MSIP34_RS02165 84c5d4e7e98ddaed1e7c12501a404f06 548 PANTHER PTHR34219 1 527 1.0E-191 T 23-04-2016 MSIP34_RS02165 84c5d4e7e98ddaed1e7c12501a404f06 548 PANTHER PTHR34219:SF4 1 527 1.0E-191 T 23-04-2016 MSIP34_RS02165 84c5d4e7e98ddaed1e7c12501a404f06 548 Pfam PF03929 PepSY-associated TM region 10 378 9.4E-55 T 23-04-2016 IPR005625 PepSY-associated TM protein MSIP34_RS10690 8276c25eb9c56c6430d0122d28c468e5 493 Gene3D G3DSA:3.60.110.10 213 450 1.1E-28 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS10690 8276c25eb9c56c6430d0122d28c468e5 493 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 480 23.495 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 MSIP34_RS10690 8276c25eb9c56c6430d0122d28c468e5 493 SUPERFAMILY SSF56317 213 475 3.4E-42 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS10690 8276c25eb9c56c6430d0122d28c468e5 493 PANTHER PTHR38686 1 488 1.6E-91 T 23-04-2016 MSIP34_RS10690 8276c25eb9c56c6430d0122d28c468e5 493 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 62 442 2.5E-113 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 MSIP34_RS10690 8276c25eb9c56c6430d0122d28c468e5 493 Pfam PF00795 Carbon-nitrogen hydrolase 221 468 7.6E-32 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 Gene3D G3DSA:3.30.300.30 392 491 2.0E-7 T 23-04-2016 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 Gene3D G3DSA:3.40.50.980 3 162 3.5E-26 T 23-04-2016 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 Gene3D G3DSA:3.40.50.980 163 331 2.1E-28 T 23-04-2016 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 PANTHER PTHR24096 1 505 1.1E-86 T 23-04-2016 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 Gene3D G3DSA:2.30.38.10 342 387 3.7E-5 T 23-04-2016 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 Pfam PF00501 AMP-binding enzyme 8 392 1.6E-61 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 SUPERFAMILY SSF56801 3 503 4.58E-93 T 23-04-2016 MSIP34_RS13150 7df71e40cc919675c7412823dca785ba 508 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 23-04-2016 IPR020845 AMP-binding, conserved site MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 PANTHER PTHR33516 15 145 5.4E-35 T 23-04-2016 MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 Gene3D G3DSA:2.10.109.10 31 142 2.0E-41 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 96 108 1.1E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 57 67 1.1E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 68 79 1.1E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 SUPERFAMILY SSF51306 16 141 9.42E-33 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 Pfam PF00717 Peptidase S24-like 60 126 2.8E-12 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS05935 20ed0bb62b800203d9aa09b49d288adf 145 PANTHER PTHR33516:SF1 15 145 5.4E-35 T 23-04-2016 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 Gene3D G3DSA:3.50.50.60 149 279 2.3E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 PANTHER PTHR10632:SF10 33 419 1.3E-102 T 23-04-2016 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 33 149 5.0E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 Gene3D G3DSA:3.90.760.10 354 419 3.4E-22 T 23-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 SUPERFAMILY SSF51905 150 279 9.07E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 Pfam PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding 355 419 3.0E-20 T 23-04-2016 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding GO:0016491|GO:0050660|GO:0055114 KEGG: 00920+1.8.2.3|MetaCyc: PWY-5274 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 SUPERFAMILY SSF51905 32 148 1.01E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 PANTHER PTHR10632 33 419 1.3E-102 T 23-04-2016 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 Gene3D G3DSA:3.50.50.60 283 349 5.5E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 Gene3D G3DSA:3.50.50.60 32 146 5.5E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS04590 6e01109f1d30d7f4d7b94910f8cd44ef 420 SUPERFAMILY SSF55424 354 419 4.12E-16 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 PANTHER PTHR13847:SF148 1 63 1.6E-200 T 23-04-2016 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 PANTHER PTHR13847:SF148 107 417 1.6E-200 T 23-04-2016 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 409 48.096 T 23-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Gene3D G3DSA:3.30.9.10 134 192 4.4E-17 T 23-04-2016 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Gene3D G3DSA:3.30.9.10 268 351 4.4E-17 T 23-04-2016 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 SUPERFAMILY SSF54373 268 358 3.27E-18 T 23-04-2016 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Gene3D G3DSA:3.40.50.720 193 267 1.5E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Gene3D G3DSA:3.40.50.720 352 415 1.5E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Gene3D G3DSA:3.40.50.720 1 96 1.5E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 SUPERFAMILY SSF51905 1 54 1.04E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 SUPERFAMILY SSF51905 358 414 1.04E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 SUPERFAMILY SSF51905 107 270 1.04E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 Pfam PF01266 FAD dependent oxidoreductase 2 396 3.1E-71 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 PANTHER PTHR13847 1 63 1.6E-200 T 23-04-2016 MSIP34_RS09425 360b56f207748ebac84b0ac35910ac75 417 PANTHER PTHR13847 107 417 1.6E-200 T 23-04-2016 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 187 1.1E-51 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 SUPERFAMILY SSF47781 66 132 2.26E-21 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Pfam PF01330 RuvA N terminal domain 1 62 9.9E-21 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Gene3D G3DSA:2.40.50.140 1 64 9.5E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Pfam PF14520 Helix-hairpin-helix domain 72 130 8.3E-19 T 23-04-2016 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Gene3D G3DSA:1.10.8.10 146 189 2.4E-8 T 23-04-2016 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Pfam PF07499 RuvA, C-terminal domain 147 190 8.5E-12 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 SUPERFAMILY SSF50249 1 63 3.26E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 PANTHER PTHR33796 2 192 2.0E-70 T 23-04-2016 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 SUPERFAMILY SSF46929 148 191 1.7E-8 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 SMART SM00278 73 92 0.44 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 SMART SM00278 108 127 0.0027 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 190 30.86 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 MSIP34_RS12095 637f93380397606025efdd5ca9e2dbcb 192 Gene3D G3DSA:1.10.150.20 67 132 1.7E-29 T 23-04-2016 MSIP34_RS06985 81fa047f7d9ed36a3076f3a0d49f9fd4 205 PANTHER PTHR19136:SF78 1 197 1.7E-29 T 23-04-2016 MSIP34_RS06985 81fa047f7d9ed36a3076f3a0d49f9fd4 205 Pfam PF12804 MobA-like NTP transferase domain 7 171 2.2E-30 T 23-04-2016 IPR025877 MobA-like NTP transferase MSIP34_RS06985 81fa047f7d9ed36a3076f3a0d49f9fd4 205 SUPERFAMILY SSF53448 4 195 1.01E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06985 81fa047f7d9ed36a3076f3a0d49f9fd4 205 PANTHER PTHR19136 1 197 1.7E-29 T 23-04-2016 MSIP34_RS06985 81fa047f7d9ed36a3076f3a0d49f9fd4 205 Gene3D G3DSA:3.90.550.10 1 198 4.4E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 Gene3D G3DSA:3.30.1320.10 1 78 4.5E-32 T 23-04-2016 IPR023803 Ribosomal protein S16 domain MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 3.5E-28 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 PANTHER PTHR12919 1 78 3.8E-36 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 Pfam PF00886 Ribosomal protein S16 8 68 1.9E-24 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.618 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 23-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12040 e5f7abfde450f86a4d8423d8af92b6b0 83 SUPERFAMILY SSF54565 1 77 1.09E-28 T 23-04-2016 IPR023803 Ribosomal protein S16 domain MSIP34_RS05675 f416123a26da23dac22dbb4ace320fe4 536 Pfam PF00990 Diguanylate cyclase, GGDEF domain 389 531 6.1E-27 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05675 f416123a26da23dac22dbb4ace320fe4 536 Pfam PF07695 7TM diverse intracellular signalling 169 365 3.2E-17 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 MSIP34_RS05675 f416123a26da23dac22dbb4ace320fe4 536 SUPERFAMILY SSF55073 394 532 1.1E-27 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05675 f416123a26da23dac22dbb4ace320fe4 536 Gene3D G3DSA:3.30.70.270 390 532 1.6E-29 T 23-04-2016 MSIP34_RS05675 f416123a26da23dac22dbb4ace320fe4 536 SMART SM00267 379 536 7.6E-29 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05675 f416123a26da23dac22dbb4ace320fe4 536 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 388 533 1.3E-20 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 PANTHER PTHR11468 23 824 0.0 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 Pfam PF00343 Carbohydrate phosphorylase 109 820 0.0 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 Gene3D G3DSA:3.40.50.2000 490 805 1.8E-137 T 23-04-2016 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 Gene3D G3DSA:3.40.50.2000 16 489 1.8E-216 T 23-04-2016 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 PIRSF PIRSF000460 4 824 2.3E-236 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 SUPERFAMILY SSF53756 15 823 0.0 T 23-04-2016 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 664 676 - T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 MSIP34_RS08905 1da14d872cfe0fdbfd8887509dd4ad98 825 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 22 820 0.0 T 23-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 PANTHER PTHR11082:SF25 2 326 7.4E-143 T 23-04-2016 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 SUPERFAMILY SSF51395 10 318 7.69E-92 T 23-04-2016 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 PIRSF PIRSF006621 1 327 2.3E-107 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 Gene3D G3DSA:3.20.20.70 7 245 4.7E-86 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 6.6E-110 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 1.6E-131 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 PANTHER PTHR11082 2 326 7.4E-143 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 Gene3D G3DSA:1.10.1200.80 252 327 1.1E-26 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 MSIP34_RS01965 265112d76838531e3293c2cf0f699cd8 343 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 51.336 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 Pfam PF02545 Maf-like protein 5 187 2.4E-43 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 SUPERFAMILY SSF52972 2 187 5.3E-57 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 186 6.4E-49 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 PIRSF PIRSF006305 1 193 5.4E-43 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 Gene3D G3DSA:3.90.950.10 3 190 1.4E-57 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 Hamap MF_00528 Septum formation protein Maf [maf]. 4 192 30.205 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 PANTHER PTHR11746 117 193 1.1E-25 T 23-04-2016 MSIP34_RS07085 41231b48bca019996bd4a12d8532c959 193 PANTHER PTHR11746:SF102 117 193 1.1E-25 T 23-04-2016 MSIP34_RS13120 d31552501c5d2e2735e5f2af0a8360ac 131 SUPERFAMILY SSF140804 9 117 2.09E-29 T 23-04-2016 IPR027405 YidB-like MSIP34_RS13120 d31552501c5d2e2735e5f2af0a8360ac 131 Pfam PF06078 Bacterial protein of unknown function (DUF937) 9 110 4.4E-9 T 23-04-2016 IPR009282 Protein of unknown function DUF937 MSIP34_RS13120 d31552501c5d2e2735e5f2af0a8360ac 131 Gene3D G3DSA:1.10.10.690 5 126 2.2E-36 T 23-04-2016 IPR027405 YidB-like MSIP34_RS03465 55c8f641837f4a04273b26d0efbbbae3 343 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 14 337 25.472 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MSIP34_RS03465 55c8f641837f4a04273b26d0efbbbae3 343 PANTHER PTHR11432:SF3 4 334 6.2E-171 T 23-04-2016 MSIP34_RS03465 55c8f641837f4a04273b26d0efbbbae3 343 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 60 75 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 MSIP34_RS03465 55c8f641837f4a04273b26d0efbbbae3 343 PANTHER PTHR11432 4 334 6.2E-171 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MSIP34_RS03465 55c8f641837f4a04273b26d0efbbbae3 343 Pfam PF00146 NADH dehydrogenase 21 330 3.2E-128 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 MSIP34_RS03465 55c8f641837f4a04273b26d0efbbbae3 343 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 218 231 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.987 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 PANTHER PTHR11655 1 176 6.8E-83 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 Gene3D G3DSA:3.90.930.12 83 177 6.6E-40 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.4E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.4E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.4E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 PANTHER PTHR11655:SF14 1 176 6.8E-83 T 23-04-2016 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.7E-73 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 Gene3D G3DSA:3.90.930.12 2 82 9.1E-26 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 SUPERFAMILY SSF56053 1 82 1.34E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 PIRSF PIRSF002162 1 177 1.4E-46 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 Pfam PF00347 Ribosomal protein L6 90 164 6.5E-20 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 Pfam PF00347 Ribosomal protein L6 11 82 2.7E-12 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS01655 36a209f52edb77ea373cc099d281f18b 177 SUPERFAMILY SSF56053 83 177 1.32E-35 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS14655 06e7e213e7d50ebf0af8d13b99f3eaac 195 Gene3D G3DSA:1.10.287.110 137 190 6.1E-14 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS14655 06e7e213e7d50ebf0af8d13b99f3eaac 195 SUPERFAMILY SSF46565 139 189 1.07E-11 T 23-04-2016 IPR001623 DnaJ domain MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 286 3.4E-9 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 SMART SM01210 320 421 1.5E-8 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 Gene3D G3DSA:3.90.600.10 322 419 9.3E-11 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 SUPERFAMILY SSF56059 99 294 8.43E-15 T 23-04-2016 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 PANTHER PTHR10520:SF40 1 419 1.6E-23 T 23-04-2016 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 Gene3D G3DSA:3.30.470.20 190 309 4.4E-7 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 PANTHER PTHR10520 1 419 1.6E-23 T 23-04-2016 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 SUPERFAMILY SSF51246 319 420 2.59E-8 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 SMART SM01209 98 288 0.005 T 23-04-2016 MSIP34_RS12825 a4230b808df8a9ed291958c3ca48cb24 436 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 338 419 5.3E-7 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303:SF2 257 379 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 Pfam PF13360 PQQ-like domain 463 554 5.4E-10 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 Pfam PF13360 PQQ-like domain 38 159 1.9E-12 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303 5 132 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303 396 559 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 Pfam PF01011 PQQ enzyme repeat 315 340 3.3E-4 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303 151 232 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303 257 379 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SMART SM00564 489 521 0.0035 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SMART SM00564 169 230 15.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SMART SM00564 52 84 0.0035 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SMART SM00564 280 330 1.4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SMART SM00564 102 133 1.2E-5 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SMART SM00564 440 480 49.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303:SF2 5 132 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303:SF2 151 232 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 PANTHER PTHR32303:SF2 396 559 7.9E-86 T 23-04-2016 MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 Gene3D G3DSA:2.140.10.10 6 565 3.4E-139 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS06680 8c688bdbc65d7880f02f312d8a7c25e7 566 SUPERFAMILY SSF50998 5 565 2.09E-144 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 PANTHER PTHR30562:SF1 5 599 5.9E-261 T 23-04-2016 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 378 533 2.7E-52 T 23-04-2016 IPR001162 UvrC family homology region MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 SMART SM00465 14 95 1.7E-20 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 SUPERFAMILY SSF82771 13 97 9.68E-24 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 PANTHER PTHR30562 5 599 5.9E-261 T 23-04-2016 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Gene3D G3DSA:3.40.1440.10 15 94 7.6E-9 T 23-04-2016 IPR027299 GIY-YIG domain MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 580 3.8E-194 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 598 28.314 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 SUPERFAMILY SSF47781 515 600 3.15E-23 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Gene3D G3DSA:4.10.860.10 179 239 9.5E-17 T 23-04-2016 IPR001943 UVR domain GO:0005515 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Pfam PF02151 UvrB/uvrC motif 202 234 4.9E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Pfam PF01541 GIY-YIG catalytic domain 16 90 8.0E-11 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Pfam PF14520 Helix-hairpin-helix domain 548 599 3.5E-8 T 23-04-2016 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 Gene3D G3DSA:1.10.150.20 546 600 3.2E-22 T 23-04-2016 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 SMART SM00278 547 566 110.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 SMART SM00278 579 598 0.058 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS05115 2c173999d045e3005fcccbf1fde9a261 600 SUPERFAMILY SSF46600 187 239 8.37E-13 T 23-04-2016 IPR001943 UVR domain GO:0005515 MSIP34_RS03210 dbf644bb13dc3e1634d3ede4bb11357c 422 Pfam PF12704 MacB-like periplasmic core domain 32 213 1.8E-21 T 23-04-2016 IPR025857 MacB-like periplasmic core domain MSIP34_RS03210 dbf644bb13dc3e1634d3ede4bb11357c 422 PANTHER PTHR30489 8 422 9.1E-117 T 23-04-2016 MSIP34_RS03210 dbf644bb13dc3e1634d3ede4bb11357c 422 PANTHER PTHR30489:SF8 8 422 9.1E-117 T 23-04-2016 MSIP34_RS03210 dbf644bb13dc3e1634d3ede4bb11357c 422 Pfam PF02687 FtsX-like permease family 282 415 1.3E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 MSIP34_RS03210 dbf644bb13dc3e1634d3ede4bb11357c 422 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 10 422 1.9E-159 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 MSIP34_RS08140 c5f28317ea19936d3bbeac911c4ffc75 219 PANTHER PTHR13604 63 212 1.1E-28 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS08140 c5f28317ea19936d3bbeac911c4ffc75 219 Gene3D G3DSA:3.90.1680.10 1 211 8.3E-39 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS08140 c5f28317ea19936d3bbeac911c4ffc75 219 Pfam PF02586 SOS response associated peptidase (SRAP) 1 208 5.1E-33 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS08140 c5f28317ea19936d3bbeac911c4ffc75 219 SUPERFAMILY SSF143081 2 213 9.16E-58 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS03515 fd9e503d3c83a6a01ad324911b300ebc 191 Pfam PF00293 NUDIX domain 47 143 2.0E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 MSIP34_RS03515 fd9e503d3c83a6a01ad324911b300ebc 191 SUPERFAMILY SSF55811 12 179 1.03E-47 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS03515 fd9e503d3c83a6a01ad324911b300ebc 191 Gene3D G3DSA:3.90.79.10 11 179 2.1E-54 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS03515 fd9e503d3c83a6a01ad324911b300ebc 191 PANTHER PTHR11839 12 191 1.8E-51 T 23-04-2016 MSIP34_RS03515 fd9e503d3c83a6a01ad324911b300ebc 191 PANTHER PTHR11839:SF9 12 191 1.8E-51 T 23-04-2016 MSIP34_RS05330 7c71100c51917f6ae53e6d93b78da7f6 260 Pfam PF07589 PEP-CTERM motif 231 255 2.7E-7 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS05330 7c71100c51917f6ae53e6d93b78da7f6 260 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 232 255 1.0E-5 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS11460 92e292a3d02dbb56740dc02a15c83186 296 SUPERFAMILY SSF63829 178 246 1.96E-9 T 23-04-2016 MSIP34_RS11460 92e292a3d02dbb56740dc02a15c83186 296 SUPERFAMILY SSF63829 37 116 1.96E-9 T 23-04-2016 MSIP34_RS11460 92e292a3d02dbb56740dc02a15c83186 296 Gene3D G3DSA:2.120.10.30 42 97 6.1E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS11460 92e292a3d02dbb56740dc02a15c83186 296 Gene3D G3DSA:2.120.10.30 157 251 6.1E-7 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS01860 afbcc20775969005d4d0a305e689d08e 689 Pfam PF02554 Carbon starvation protein CstA 32 406 6.1E-163 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 MSIP34_RS01860 afbcc20775969005d4d0a305e689d08e 689 PANTHER PTHR30252:SF3 6 689 0.0 T 23-04-2016 MSIP34_RS01860 afbcc20775969005d4d0a305e689d08e 689 PANTHER PTHR30252 6 689 0.0 T 23-04-2016 MSIP34_RS01860 afbcc20775969005d4d0a305e689d08e 689 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 590 1.9E-32 T 23-04-2016 IPR025299 CstA, C-terminal domain MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 Gene3D G3DSA:3.10.580.10 201 327 3.1E-35 T 23-04-2016 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 PIRSF PIRSF004692 4 332 3.7E-130 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 Pfam PF01380 SIS domain 49 180 2.9E-31 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 53 322 5.1E-109 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 SUPERFAMILY SSF53697 13 329 1.38E-67 T 23-04-2016 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 PANTHER PTHR38418 16 205 3.9E-40 T 23-04-2016 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 Pfam PF00571 CBS domain 277 329 7.6E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 Pfam PF00571 CBS domain 209 265 0.0036 T 23-04-2016 IPR000644 CBS domain MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 Gene3D G3DSA:3.40.50.10490 18 200 3.0E-52 T 23-04-2016 MSIP34_RS01090 f7b5e8772041b7e8c0d56bb72ddd643e 332 PANTHER PTHR38418:SF1 16 205 3.9E-40 T 23-04-2016 MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 SUPERFAMILY SSF53335 18 237 1.96E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 25 238 30.632 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 Pfam PF02390 Putative methyltransferase 66 232 1.3E-56 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 Gene3D G3DSA:3.40.50.150 64 205 9.7E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 56 237 1.1E-53 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 PANTHER PTHR23417 19 237 1.7E-73 T 23-04-2016 MSIP34_RS01295 52bb3e93d8712d0dec1e215faacce1a5 238 PANTHER PTHR23417:SF14 19 237 1.7E-73 T 23-04-2016 MSIP34_RS11110 4c71df8a73b9d28fef304b8a21964882 148 Pfam PF00072 Response regulator receiver domain 9 131 2.9E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11110 4c71df8a73b9d28fef304b8a21964882 148 SMART SM00448 7 131 5.0E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11110 4c71df8a73b9d28fef304b8a21964882 148 SUPERFAMILY SSF52172 3 141 4.98E-34 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS11110 4c71df8a73b9d28fef304b8a21964882 148 PANTHER PTHR26402 7 134 1.7E-34 T 23-04-2016 MSIP34_RS11110 4c71df8a73b9d28fef304b8a21964882 148 Gene3D G3DSA:3.40.50.2300 4 134 1.2E-38 T 23-04-2016 MSIP34_RS09930 5646b1de5a480490d91761c2c5c14c48 395 SUPERFAMILY SSF103473 16 392 1.19E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS09930 5646b1de5a480490d91761c2c5c14c48 395 PANTHER PTHR23523:SF2 17 389 3.1E-72 T 23-04-2016 MSIP34_RS09930 5646b1de5a480490d91761c2c5c14c48 395 Pfam PF07690 Major Facilitator Superfamily 33 239 3.9E-16 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS09930 5646b1de5a480490d91761c2c5c14c48 395 PANTHER PTHR23523 17 389 3.1E-72 T 23-04-2016 MSIP34_RS09930 5646b1de5a480490d91761c2c5c14c48 395 Gene3D G3DSA:1.20.1250.20 18 198 4.7E-20 T 23-04-2016 MSIP34_RS09930 5646b1de5a480490d91761c2c5c14c48 395 Gene3D G3DSA:1.20.1250.20 211 392 1.0E-16 T 23-04-2016 MSIP34_RS08530 3a57e92893bc9ac88ede492cb0c9631d 191 SUPERFAMILY SSF50475 1 177 2.82E-51 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS08530 3a57e92893bc9ac88ede492cb0c9631d 191 Pfam PF04289 Protein of unknown function (DUF447) 3 175 2.0E-46 T 23-04-2016 IPR007386 Protein of unknown function DUF447 MSIP34_RS08530 3a57e92893bc9ac88ede492cb0c9631d 191 Gene3D G3DSA:1.20.58.290 116 178 1.2E-25 T 23-04-2016 MSIP34_RS08530 3a57e92893bc9ac88ede492cb0c9631d 191 Gene3D G3DSA:2.30.110.10 1 115 1.1E-36 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS08010 ee7d273b4f9295fc829422d81ee37888 248 PANTHER PTHR30060 1 236 2.4E-117 T 23-04-2016 MSIP34_RS08010 ee7d273b4f9295fc829422d81ee37888 248 Pfam PF03741 Integral membrane protein TerC family 16 205 4.7E-49 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 MSIP34_RS08010 ee7d273b4f9295fc829422d81ee37888 248 PANTHER PTHR30060:SF1 1 236 2.4E-117 T 23-04-2016 MSIP34_RS05695 8cfe5e8663feb9f19c9e49aaacf2a296 415 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 390 6.0E-27 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) MSIP34_RS05695 8cfe5e8663feb9f19c9e49aaacf2a296 415 PANTHER PTHR35093 186 415 3.9E-22 T 23-04-2016 MSIP34_RS05695 8cfe5e8663feb9f19c9e49aaacf2a296 415 PANTHER PTHR35093:SF2 186 415 3.9E-22 T 23-04-2016 MSIP34_RS05695 8cfe5e8663feb9f19c9e49aaacf2a296 415 Gene3D G3DSA:2.40.160.60 27 413 9.5E-62 T 23-04-2016 MSIP34_RS05695 8cfe5e8663feb9f19c9e49aaacf2a296 415 SUPERFAMILY SSF56935 28 393 1.92E-44 T 23-04-2016 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 PANTHER PTHR10266 1 161 1.8E-46 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 PANTHER PTHR10266 187 244 1.8E-46 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 Gene3D G3DSA:1.10.760.10 17 209 2.3E-65 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 Gene3D G3DSA:1.20.5.100 214 244 1.5E-7 T 23-04-2016 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 PANTHER PTHR10266:SF3 1 161 1.8E-46 T 23-04-2016 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 PANTHER PTHR10266:SF3 187 244 1.8E-46 T 23-04-2016 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 SUPERFAMILY SSF46626 19 208 7.05E-52 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01470 2929a5afdd2002ee18bc56c4c233f81c 244 Pfam PF02167 Cytochrome C1 family 32 242 1.3E-22 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 353 1.7E-126 T 23-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 Gene3D G3DSA:3.40.50.10470 167 361 2.1E-65 T 23-04-2016 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 SUPERFAMILY SSF100950 7 361 6.28E-114 T 23-04-2016 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 PANTHER PTHR10233:SF6 16 357 3.6E-136 T 23-04-2016 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 353 4.8E-96 T 23-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 364 36.798 T 23-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 Pfam PF01008 Initiation factor 2 subunit family 51 354 7.6E-65 T 23-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 PANTHER PTHR10233 16 357 3.6E-136 T 23-04-2016 MSIP34_RS04360 0e4545663ee3f05f1411acf9412e0e92 365 Gene3D G3DSA:1.20.120.420 16 166 3.7E-45 T 23-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 MSIP34_RS03395 29009a469b2eb9429866e6552c213c21 210 Gene3D G3DSA:3.40.50.300 3 201 6.6E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03395 29009a469b2eb9429866e6552c213c21 210 PANTHER PTHR13696:SF54 4 192 1.3E-21 T 23-04-2016 MSIP34_RS03395 29009a469b2eb9429866e6552c213c21 210 PANTHER PTHR13696 4 192 1.3E-21 T 23-04-2016 MSIP34_RS03395 29009a469b2eb9429866e6552c213c21 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 152 6.5E-23 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MSIP34_RS03395 29009a469b2eb9429866e6552c213c21 210 SUPERFAMILY SSF52540 2 193 3.1E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 Pfam PF01163 RIO1 family 31 219 2.9E-42 T 23-04-2016 MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 PANTHER PTHR10593 6 272 1.4E-115 T 23-04-2016 MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 PANTHER PTHR10593:SF19 6 272 1.4E-115 T 23-04-2016 MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 SUPERFAMILY SSF56112 18 213 2.16E-20 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 Gene3D G3DSA:3.30.200.20 17 125 3.7E-12 T 23-04-2016 MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 SMART SM00090 5 231 2.8E-15 T 23-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 Gene3D G3DSA:1.10.510.10 139 216 1.3E-17 T 23-04-2016 MSIP34_RS00025 fa8acdc65a0ba9b05154e30847bc065e 291 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 23-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 Gene3D G3DSA:3.30.70.120 1 102 1.6E-27 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 PRINTS PR00340 P-II protein signature 82 102 4.8E-18 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 PRINTS PR00340 P-II protein signature 51 74 4.8E-18 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 PRINTS PR00340 P-II protein signature 2 17 4.8E-18 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 SUPERFAMILY SSF54913 1 102 1.84E-26 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 SMART SM00938 4 104 4.3E-29 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 PANTHER PTHR30115 1 100 1.7E-24 T 23-04-2016 MSIP34_RS11285 b52d186b4e7f4474de5ccfb519f12b99 110 Pfam PF00543 Nitrogen regulatory protein P-II 4 101 1.3E-22 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 PANTHER PTHR10366:SF256 297 566 4.3E-123 T 23-04-2016 MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 Pfam PF13727 CoA-binding domain 76 253 2.0E-12 T 23-04-2016 MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 SUPERFAMILY SSF53335 128 354 4.65E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 PANTHER PTHR10366 297 566 4.3E-123 T 23-04-2016 MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 SUPERFAMILY SSF51735 297 601 9.03E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 Gene3D G3DSA:3.40.50.720 153 262 3.4E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 Pfam PF02719 Polysaccharide biosynthesis protein 298 580 2.2E-119 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 Gene3D G3DSA:3.90.25.10 600 621 1.1E-6 T 23-04-2016 MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 Gene3D G3DSA:3.90.25.10 480 558 1.1E-6 T 23-04-2016 MSIP34_RS08740 810c488682d19e065b35a1dfdc6f342c 644 Gene3D G3DSA:3.40.50.720 297 479 3.7E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 26 466 2.0E-176 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 377 386 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 Gene3D G3DSA:3.40.50.300 123 387 4.1E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 34 94 1.4E-4 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 SMART SM00382 187 370 1.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 175 386 4.5E-75 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 PANTHER PTHR15184 8 96 1.9E-225 T 23-04-2016 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 PANTHER PTHR15184 117 462 1.9E-225 T 23-04-2016 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 PANTHER PTHR15184:SF9 8 96 1.9E-225 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 PANTHER PTHR15184:SF9 117 462 1.9E-225 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 SUPERFAMILY SSF52540 122 391 4.0E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03880 d975608250515e11dc43df107dd88492 468 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 32 464 1.3E-198 T 23-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 17 149 2.2E-15 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 SUPERFAMILY SSF160246 8 146 1.1E-31 T 23-04-2016 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 12 572 2.7E-249 T 23-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 SUPERFAMILY SSF52540 178 570 1.2E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 Gene3D G3DSA:3.30.450.90 171 294 3.7E-51 T 23-04-2016 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 PANTHER PTHR30258:SF1 1 573 4.8E-233 T 23-04-2016 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 Pfam PF00437 Type II/IV secretion system protein 195 461 5.3E-82 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 Gene3D G3DSA:3.40.50.300 301 571 1.6E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 389 403 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS02985 51e8043c8ca6418c94d6ff7781e05e88 573 PANTHER PTHR30258 1 573 4.8E-233 T 23-04-2016 MSIP34_RS13230 9820731d6b862afba680a333ad66db3d 331 Pfam PF01734 Patatin-like phospholipase 12 201 6.5E-23 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 MSIP34_RS13230 9820731d6b862afba680a333ad66db3d 331 PANTHER PTHR10622:SF4 5 276 3.8E-22 T 23-04-2016 MSIP34_RS13230 9820731d6b862afba680a333ad66db3d 331 Gene3D G3DSA:3.40.1090.10 4 310 1.2E-62 T 23-04-2016 MSIP34_RS13230 9820731d6b862afba680a333ad66db3d 331 SUPERFAMILY SSF52151 7 310 1.26E-49 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 MSIP34_RS13230 9820731d6b862afba680a333ad66db3d 331 PANTHER PTHR10622 5 276 3.8E-22 T 23-04-2016 MSIP34_RS07625 29b608af574a98c8709a35baf60c3b41 178 Gene3D G3DSA:3.40.50.10490 14 177 1.6E-36 T 23-04-2016 MSIP34_RS07625 29b608af574a98c8709a35baf60c3b41 178 SUPERFAMILY SSF53697 6 177 4.85E-30 T 23-04-2016 MSIP34_RS07625 29b608af574a98c8709a35baf60c3b41 178 PANTHER PTHR10937:SF11 1 127 1.8E-29 T 23-04-2016 MSIP34_RS07625 29b608af574a98c8709a35baf60c3b41 178 PANTHER PTHR10937 1 127 1.8E-29 T 23-04-2016 MSIP34_RS07625 29b608af574a98c8709a35baf60c3b41 178 Pfam PF01380 SIS domain 33 132 2.6E-13 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 PIRSF PIRSF002131 1 129 7.3E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 Gene3D G3DSA:3.30.420.80 7 129 1.2E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 PANTHER PTHR11759 11 129 4.3E-71 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 SUPERFAMILY SSF53137 14 129 7.85E-48 T 23-04-2016 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 6.0E-57 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 Pfam PF00411 Ribosomal protein S11 19 128 3.2E-51 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01695 9fe764a198ed959ea4fd6b76424dd935 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.987 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS08770 7c9d7229a0c7401c084670bff2931196 151 Gene3D G3DSA:3.90.1170.40 2 148 7.9E-57 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS08770 7c9d7229a0c7401c084670bff2931196 151 Pfam PF02391 MoaE protein 6 119 4.0E-36 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS08770 7c9d7229a0c7401c084670bff2931196 151 SUPERFAMILY SSF54690 3 148 1.23E-52 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS08770 7c9d7229a0c7401c084670bff2931196 151 PANTHER PTHR23404:SF2 3 150 3.0E-37 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS08770 7c9d7229a0c7401c084670bff2931196 151 PANTHER PTHR23404 3 150 3.0E-37 T 23-04-2016 MSIP34_RS12355 e6630865d1f91abf02a6eb0eb43ab9da 477 SUPERFAMILY SSF48371 378 460 3.07E-6 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 MSIP34_RS12355 e6630865d1f91abf02a6eb0eb43ab9da 477 Gene3D G3DSA:1.25.10.10 195 430 9.4E-26 T 23-04-2016 IPR011989 Armadillo-like helical MSIP34_RS12355 e6630865d1f91abf02a6eb0eb43ab9da 477 SUPERFAMILY SSF48371 139 298 9.87E-8 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 MSIP34_RS12355 e6630865d1f91abf02a6eb0eb43ab9da 477 SUPERFAMILY SSF48371 310 372 3.84E-5 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 MSIP34_RS10090 776cb9dd6a1ed2fbbd0ba9002dac78e8 199 PANTHER PTHR38693:SF1 6 195 2.3E-19 T 23-04-2016 MSIP34_RS10090 776cb9dd6a1ed2fbbd0ba9002dac78e8 199 Pfam PF02036 SCP-2 sterol transfer family 12 101 4.1E-5 T 23-04-2016 IPR003033 SCP2 sterol-binding domain MSIP34_RS10090 776cb9dd6a1ed2fbbd0ba9002dac78e8 199 PANTHER PTHR38693 6 195 2.3E-19 T 23-04-2016 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 PANTHER PTHR31846 2 94 5.1E-22 T 23-04-2016 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 SMART SM01103 4 87 6.5E-38 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 SUPERFAMILY SSF75471 3 94 5.62E-29 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 96 9.0E-23 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 4 94 8.8E-23 T 23-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 4 87 6.5E-22 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 MSIP34_RS09485 7dd7c36dff35b300d104510f80f36589 97 Gene3D G3DSA:3.30.110.60 3 93 4.7E-30 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 MSIP34_RS06720 bb6440c456bda3e5abd15d73dad5fc79 462 SUPERFAMILY SSF64383 311 445 5.49E-33 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 MSIP34_RS06720 bb6440c456bda3e5abd15d73dad5fc79 462 PANTHER PTHR38685 311 450 8.0E-13 T 23-04-2016 MSIP34_RS06720 bb6440c456bda3e5abd15d73dad5fc79 462 SMART SM00771 312 438 3.1E-26 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 MSIP34_RS06720 bb6440c456bda3e5abd15d73dad5fc79 462 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 318 438 1.0E-24 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 MSIP34_RS06720 bb6440c456bda3e5abd15d73dad5fc79 462 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 315 437 4.0E-36 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 MSIP34_RS06720 bb6440c456bda3e5abd15d73dad5fc79 462 Gene3D G3DSA:3.30.1400.10 311 444 9.1E-30 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 2.8E-131 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 8.6E-64 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 SUPERFAMILY SSF51735 1 182 8.6E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 SUPERFAMILY SSF48179 183 332 1.17E-68 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 Gene3D G3DSA:1.10.1040.10 29 325 1.7E-113 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 7.7E-75 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 PANTHER PTHR21371 1 337 2.4E-183 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03085 9f96ebc95987af9801051597c1d7f238 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.351 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 SUPERFAMILY SSF81301 2 119 1.85E-29 T 23-04-2016 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Gene3D G3DSA:1.10.3090.10 122 358 2.4E-55 T 23-04-2016 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 SUPERFAMILY SSF81891 120 356 2.62E-53 T 23-04-2016 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 PIRSF PIRSF000813 1 405 4.9E-190 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 399 40.521 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 PANTHER PTHR13734 5 298 2.3E-69 T 23-04-2016 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 148 209 1.3E-13 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Gene3D G3DSA:3.30.460.10 1 121 3.8E-30 T 23-04-2016 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 405 51.461 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Pfam PF01966 HD domain 229 327 3.0E-7 T 23-04-2016 IPR006674 HD domain MSIP34_RS02400 ab071bdcc9ac0ce660ab81134bc600c8 407 Pfam PF01743 Poly A polymerase head domain 4 122 3.8E-17 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 SUPERFAMILY SSF53335 13 287 1.14E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 Gene3D G3DSA:3.40.50.150 106 285 5.8E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 PIRSF PIRSF037167 1 303 4.0E-130 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 11 294 4.0E-129 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 PANTHER PTHR18895 6 298 2.3E-126 T 23-04-2016 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 Gene3D G3DSA:1.10.8.10 13 104 6.1E-9 T 23-04-2016 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 4 300 51.218 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 PANTHER PTHR18895:SF66 6 298 2.3E-126 T 23-04-2016 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 Pfam PF05175 Methyltransferase small domain 134 212 3.0E-16 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 297 1.7E-70 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 MSIP34_RS04735 5de68422a24c4bc111a740359408fcaa 304 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MSIP34_RS08835 0b1b52d08e6e34f2179b67c3d68edfe3 829 Pfam PF02687 FtsX-like permease family 709 822 4.1E-16 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 MSIP34_RS08835 0b1b52d08e6e34f2179b67c3d68edfe3 829 Pfam PF02687 FtsX-like permease family 259 374 2.7E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 MSIP34_RS08835 0b1b52d08e6e34f2179b67c3d68edfe3 829 PANTHER PTHR30287 1 829 8.1E-124 T 23-04-2016 MSIP34_RS09820 327693f057c77df3feeb483986de9872 450 Pfam PF13458 Periplasmic binding protein 37 408 2.7E-77 T 23-04-2016 IPR028081 Leucine-binding protein domain MSIP34_RS09820 327693f057c77df3feeb483986de9872 450 Gene3D G3DSA:3.40.50.2300 357 379 1.8E-21 T 23-04-2016 MSIP34_RS09820 327693f057c77df3feeb483986de9872 450 Gene3D G3DSA:3.40.50.2300 180 307 1.8E-21 T 23-04-2016 MSIP34_RS09820 327693f057c77df3feeb483986de9872 450 SUPERFAMILY SSF53822 47 414 6.73E-45 T 23-04-2016 IPR028082 Periplasmic binding protein-like I MSIP34_RS09820 327693f057c77df3feeb483986de9872 450 Gene3D G3DSA:3.40.50.2300 319 356 3.1E-6 T 23-04-2016 MSIP34_RS09820 327693f057c77df3feeb483986de9872 450 Gene3D G3DSA:3.40.50.2300 46 164 3.1E-6 T 23-04-2016 MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 SMART SM01322 1 176 2.7E-124 T 23-04-2016 IPR009822 YaeQ MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 Gene3D G3DSA:3.10.640.10 1 177 6.4E-83 T 23-04-2016 MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 SUPERFAMILY SSF52980 4 177 1.93E-74 T 23-04-2016 IPR011335 Restriction endonuclease type II-like MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 Pfam PF07152 YaeQ protein 1 173 2.6E-80 T 23-04-2016 IPR009822 YaeQ MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 PANTHER PTHR38784 1 178 6.5E-80 T 23-04-2016 MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 PANTHER PTHR38784:SF1 1 178 6.5E-80 T 23-04-2016 MSIP34_RS11180 0ad4c643f7dc3ab02a6056a77f09bffe 178 PIRSF PIRSF011484 1 178 1.6E-79 T 23-04-2016 IPR009822 YaeQ MSIP34_RS01315 aedfd09b10116d33f0720086aa7c361c 381 Pfam PF01578 Cytochrome C assembly protein 172 376 2.8E-47 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 MSIP34_RS01315 aedfd09b10116d33f0720086aa7c361c 381 PANTHER PTHR30071 114 381 2.8E-70 T 23-04-2016 MSIP34_RS01315 aedfd09b10116d33f0720086aa7c361c 381 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 142 379 8.3E-73 T 23-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 MSIP34_RS01315 aedfd09b10116d33f0720086aa7c361c 381 PANTHER PTHR30071:SF5 114 381 2.8E-70 T 23-04-2016 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 Pfam PF01134 Glucose inhibited division protein A 8 399 1.2E-165 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 23-04-2016 IPR020595 MnmG-related, conserved site MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 Gene3D G3DSA:3.50.50.60 7 233 1.6E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 SMART SM01228 545 616 5.4E-43 T 23-04-2016 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 623 42.695 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 23-04-2016 IPR020595 MnmG-related, conserved site MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 SUPERFAMILY SSF51905 97 261 2.43E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 SUPERFAMILY SSF51905 5 66 2.43E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 Pfam PF13932 GidA associated domain 402 615 1.1E-72 T 23-04-2016 IPR026904 GidA associated domain 3 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 PANTHER PTHR11806 1 627 0.0 T 23-04-2016 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 PANTHER PTHR11806:SF0 1 627 0.0 T 23-04-2016 MSIP34_RS14165 36cd8ef26e9d2b18e4c985f75521d192 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 621 1.3E-275 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 MSIP34_RS07350 d36a0df14a117662fde71fca97492802 292 Pfam PF00483 Nucleotidyl transferase 3 239 1.4E-70 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 MSIP34_RS07350 d36a0df14a117662fde71fca97492802 292 PANTHER PTHR22572:SF105 3 292 1.8E-179 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 MSIP34_RS07350 d36a0df14a117662fde71fca97492802 292 PANTHER PTHR22572 3 292 1.8E-179 T 23-04-2016 MSIP34_RS07350 d36a0df14a117662fde71fca97492802 292 SUPERFAMILY SSF53448 2 287 4.98E-91 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS07350 d36a0df14a117662fde71fca97492802 292 Gene3D G3DSA:3.90.550.10 1 265 2.0E-68 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS07350 d36a0df14a117662fde71fca97492802 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 288 9.5E-157 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 305 3.0E-98 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 Gene3D G3DSA:3.30.420.40 7 130 1.3E-39 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 SUPERFAMILY SSF109604 312 495 7.01E-45 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 PANTHER PTHR30005:SF4 3 495 3.8E-159 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 Gene3D G3DSA:3.30.420.150 133 310 4.4E-50 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 SUPERFAMILY SSF53067 11 131 8.51E-34 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 PIRSF PIRSF001267 2 496 2.3E-192 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 PANTHER PTHR30005 3 495 3.8E-159 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 SUPERFAMILY SSF53067 136 310 2.59E-44 T 23-04-2016 MSIP34_RS00880 1e46b28f6e001f101491e52caca1ece3 496 Pfam PF02541 Ppx/GppA phosphatase family 27 306 7.5E-73 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 229 444 4.1E-47 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 SMART SM00646 289 444 3.2E-64 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 Pfam PF11741 AMIN domain 32 134 9.9E-24 T 23-04-2016 IPR021731 AMIN domain MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 PANTHER PTHR30404:SF0 216 452 8.0E-100 T 23-04-2016 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 PANTHER PTHR30404:SF0 28 175 8.0E-100 T 23-04-2016 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 Gene3D G3DSA:3.40.630.40 227 324 4.1E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 Gene3D G3DSA:3.40.630.40 372 447 4.1E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 SUPERFAMILY SSF53187 371 447 3.45E-52 T 23-04-2016 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 SUPERFAMILY SSF53187 227 323 3.45E-52 T 23-04-2016 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 PANTHER PTHR30404 216 452 8.0E-100 T 23-04-2016 MSIP34_RS06550 bb53841292dfa54b6a987260f1782210 461 PANTHER PTHR30404 28 175 8.0E-100 T 23-04-2016 MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 6.8E-77 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 PANTHER PTHR30158 2 401 4.9E-150 T 23-04-2016 MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 PANTHER PTHR30158:SF3 2 401 4.9E-150 T 23-04-2016 MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 Gene3D G3DSA:2.40.50.100 66 98 9.6E-25 T 23-04-2016 MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 Gene3D G3DSA:2.40.50.100 173 208 9.6E-25 T 23-04-2016 MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 294 3.7E-11 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS05890 4429600104f32fd78ec0f172da594640 401 SUPERFAMILY SSF111369 53 299 1.2E-80 T 23-04-2016 MSIP34_RS03025 53ace8f06cc47de44a7e6e152bdef5a7 268 PANTHER PTHR36445 4 266 1.7E-76 T 23-04-2016 MSIP34_RS03025 53ace8f06cc47de44a7e6e152bdef5a7 268 Pfam PF02649 Type I GTP cyclohydrolase folE2 10 258 6.0E-99 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 MSIP34_RS03025 53ace8f06cc47de44a7e6e152bdef5a7 268 PANTHER PTHR36445:SF1 4 266 1.7E-76 T 23-04-2016 MSIP34_RS03025 53ace8f06cc47de44a7e6e152bdef5a7 268 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 9 263 38.072 T 23-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 MSIP34_RS03025 53ace8f06cc47de44a7e6e152bdef5a7 268 Gene3D G3DSA:3.10.270.10 9 262 4.7E-110 T 23-04-2016 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 SUPERFAMILY SSF52540 150 393 2.88E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 Gene3D G3DSA:3.40.50.300 149 333 2.7E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 PANTHER PTHR23076 8 599 0.0 T 23-04-2016 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 SMART SM00382 186 325 1.4E-25 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 600 36.922 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 1.6E-45 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 SUPERFAMILY SSF140990 404 599 1.28E-71 T 23-04-2016 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 Gene3D G3DSA:1.10.8.60 334 407 4.0E-29 T 23-04-2016 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 Pfam PF01434 Peptidase family M41 384 590 1.1E-78 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 Pfam PF06480 FtsH Extracellular 9 92 5.5E-13 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 591 4.0E-236 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 MSIP34_RS09475 c725908611f60f97aee715967caaa5cf 631 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 152 3.2E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 Gene3D G3DSA:2.170.130.10 20 154 7.5E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 PANTHER PTHR32552:SF0 1 638 3.2E-44 T 23-04-2016 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 Pfam PF00593 TonB dependent receptor 400 635 1.4E-18 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 SUPERFAMILY SSF56935 20 638 3.51E-89 T 23-04-2016 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 PANTHER PTHR32552 1 638 3.2E-44 T 23-04-2016 MSIP34_RS00830 e362b104774b5153122ff8bf8d8536d6 638 Gene3D G3DSA:2.40.170.20 155 638 9.6E-62 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 SMART SM00562 3 140 5.6E-86 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 Gene3D G3DSA:3.30.70.141 1 138 1.2E-59 T 23-04-2016 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 PANTHER PTHR11349 1 134 1.2E-71 T 23-04-2016 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.138 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 SUPERFAMILY SSF54919 1 138 8.51E-58 T 23-04-2016 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 2.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 2.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 2.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 2.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 2.3E-40 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS08715 d48a750e51eb4b0907880c2c48fccf16 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.2E-54 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 MSIP34_RS03555 f4aff5c51a68f647c982de38daf592bb 381 SUPERFAMILY SSF56935 65 381 1.47E-7 T 23-04-2016 MSIP34_RS03555 f4aff5c51a68f647c982de38daf592bb 381 Gene3D G3DSA:2.40.160.10 39 381 5.3E-21 T 23-04-2016 IPR023614 Porin domain MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 PANTHER PTHR34933:SF2 49 228 1.4E-39 T 23-04-2016 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 Pfam PF02107 Flagellar L-ring protein 52 227 4.7E-50 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 Hamap MF_00415 Flagellar L-ring protein [flgH]. 12 226 22.243 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 PANTHER PTHR34933 49 228 1.4E-39 T 23-04-2016 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 PRINTS PR01008 Flagellar L-ring protein signature 189 203 3.8E-19 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 PRINTS PR01008 Flagellar L-ring protein signature 142 157 3.8E-19 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 PRINTS PR01008 Flagellar L-ring protein signature 74 86 3.8E-19 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MSIP34_RS03950 0c92ac53fcc68a358054951cf3a8401f 228 PRINTS PR01008 Flagellar L-ring protein signature 168 184 3.8E-19 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 406 2.0E-175 T 23-04-2016 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 SUPERFAMILY SSF56266 16 405 3.66E-140 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 408 1.0E-127 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 Pfam PF01960 ArgJ family 24 408 4.6E-145 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 Gene3D G3DSA:3.60.70.12 12 279 4.0E-100 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 PANTHER PTHR23100:SF0 18 408 2.3E-174 T 23-04-2016 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 PANTHER PTHR23100 18 408 2.3E-174 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 MSIP34_RS02555 ec814867c877c4b3bbed951682d27ee7 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 160.329 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 MSIP34_RS04215 32a9195cf9a9892851aeda6b16cea9f2 414 Gene3D G3DSA:3.40.50.2000 182 385 5.2E-18 T 23-04-2016 MSIP34_RS04215 32a9195cf9a9892851aeda6b16cea9f2 414 PANTHER PTHR12526 158 397 3.1E-29 T 23-04-2016 MSIP34_RS04215 32a9195cf9a9892851aeda6b16cea9f2 414 Pfam PF00534 Glycosyl transferases group 1 217 385 4.1E-21 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS04215 32a9195cf9a9892851aeda6b16cea9f2 414 SUPERFAMILY SSF53756 16 397 3.18E-47 T 23-04-2016 MSIP34_RS04215 32a9195cf9a9892851aeda6b16cea9f2 414 Pfam PF12000 Gkycosyl transferase family 4 group 26 196 2.7E-66 T 23-04-2016 IPR022623 Domain of unknown function DUF3495 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 SUPERFAMILY SSF158472 209 259 5.89E-6 T 23-04-2016 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 SMART SM00388 264 327 5.1E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 PANTHER PTHR24423:SF564 201 481 4.0E-69 T 23-04-2016 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 Gene3D G3DSA:3.30.565.10 313 482 6.3E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 Pfam PF00672 HAMP domain 193 258 1.6E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 PANTHER PTHR24423 201 481 4.0E-69 T 23-04-2016 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 2.0E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 2.0E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 462 2.0E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 SUPERFAMILY SSF55874 317 482 8.38E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 SMART SM00387 372 484 6.6E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 SUPERFAMILY SSF47384 249 327 3.53E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 327 6.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 481 4.1E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 SMART SM00304 208 263 2.6E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS06385 a5404131190429fec1779eb7fc9b1a78 484 Gene3D G3DSA:1.10.287.130 254 312 4.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 148 3.8E-29 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 Gene3D G3DSA:2.40.170.20 155 621 9.7E-81 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 Gene3D G3DSA:2.170.130.10 24 154 1.6E-39 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 SUPERFAMILY SSF56935 31 621 9.58E-115 T 23-04-2016 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 PANTHER PTHR30069:SF10 19 475 2.1E-54 T 23-04-2016 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 PANTHER PTHR30069 19 475 2.1E-54 T 23-04-2016 MSIP34_RS00820 5894cbd064461015983d42a1344e550f 624 Pfam PF00593 TonB dependent receptor 397 620 7.3E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS03565 2a473bc4967a9acfa2c8bee12db9b2a1 115 Pfam PF09723 Zinc ribbon domain 1 38 7.2E-13 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain MSIP34_RS03565 2a473bc4967a9acfa2c8bee12db9b2a1 115 SMART SM00834 1 41 2.2E-14 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain MSIP34_RS03565 2a473bc4967a9acfa2c8bee12db9b2a1 115 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 49 1.8E-16 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 Pfam PF00375 Sodium:dicarboxylate symporter family 5 405 2.6E-125 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 231 250 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 149 171 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 7.4E-54 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 SUPERFAMILY SSF118215 5 405 4.05E-113 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 Gene3D G3DSA:1.10.3860.10 2 408 2.3E-126 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS01180 703c7f74aa5231aef77d61f48c3a60a4 409 PANTHER PTHR11958 1 409 3.6E-146 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 MSIP34_RS10775 e079f2e929e0b78b48962d80966d1134 229 Pfam PF03922 OmpW family 21 229 7.7E-51 T 23-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 MSIP34_RS10775 e079f2e929e0b78b48962d80966d1134 229 PANTHER PTHR36920 2 229 1.0E-55 T 23-04-2016 MSIP34_RS10775 e079f2e929e0b78b48962d80966d1134 229 SUPERFAMILY SSF56925 21 229 6.8E-23 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS10775 e079f2e929e0b78b48962d80966d1134 229 Gene3D G3DSA:2.40.160.20 21 229 7.4E-56 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS10775 e079f2e929e0b78b48962d80966d1134 229 PANTHER PTHR36920:SF1 2 229 1.0E-55 T 23-04-2016 MSIP34_RS04745 255073600b1da5fed9e31f4ad64cc10b 117 SUPERFAMILY SSF52833 1 114 6.41E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS04745 255073600b1da5fed9e31f4ad64cc10b 117 PANTHER PTHR30041:SF3 1 115 4.4E-33 T 23-04-2016 MSIP34_RS04745 255073600b1da5fed9e31f4ad64cc10b 117 Gene3D G3DSA:3.40.30.10 1 114 2.5E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS04745 255073600b1da5fed9e31f4ad64cc10b 117 PANTHER PTHR30041 1 115 4.4E-33 T 23-04-2016 MSIP34_RS04745 255073600b1da5fed9e31f4ad64cc10b 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 112 7.6E-33 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR MSIP34_RS04745 255073600b1da5fed9e31f4ad64cc10b 117 Pfam PF03960 ArsC family 4 112 9.1E-13 T 23-04-2016 IPR006660 Arsenate reductase-like MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PANTHER PTHR11206:SF90 70 85 6.3E-87 T 23-04-2016 MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PANTHER PTHR11206:SF90 215 512 6.3E-87 T 23-04-2016 MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 Pfam PF03023 MviN-like protein 28 476 1.3E-149 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PANTHER PTHR11206 70 85 6.3E-87 T 23-04-2016 MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PANTHER PTHR11206 215 512 6.3E-87 T 23-04-2016 MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PIRSF PIRSF002869 1 511 2.2E-173 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 506 8.2E-158 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 133 157 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 52 68 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 157 178 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 259 285 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 409 426 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 33 52 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS02645 e5a467d28a0c2f6a513fa142bca77ac6 512 PRINTS PR01806 Virulence factor MviN signature 357 376 7.1E-83 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ MSIP34_RS10225 aa544114cb633df67c403aef93754e5a 713 PANTHER PTHR30451 146 646 2.5E-21 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS03130 18df7d21d5bdf885fa8268f6109c4662 182 SUPERFAMILY SSF52317 1 179 8.82E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS03130 18df7d21d5bdf885fa8268f6109c4662 182 Pfam PF01965 DJ-1/PfpI family 3 163 2.7E-48 T 23-04-2016 IPR002818 DJ-1/PfpI MSIP34_RS03130 18df7d21d5bdf885fa8268f6109c4662 182 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 177 6.7E-58 T 23-04-2016 IPR006287 DJ-1 MSIP34_RS03130 18df7d21d5bdf885fa8268f6109c4662 182 Gene3D G3DSA:3.40.50.880 1 179 1.3E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS03130 18df7d21d5bdf885fa8268f6109c4662 182 PANTHER PTHR11019 1 160 8.0E-61 T 23-04-2016 MSIP34_RS03130 18df7d21d5bdf885fa8268f6109c4662 182 PANTHER PTHR11019:SF100 1 160 8.0E-61 T 23-04-2016 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 Gene3D G3DSA:1.10.760.10 119 201 6.3E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 SUPERFAMILY SSF46626 18 101 4.17E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 PANTHER PTHR33751 1 202 1.3E-61 T 23-04-2016 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 Gene3D G3DSA:1.10.760.10 27 102 3.4E-30 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 SUPERFAMILY SSF46626 115 200 1.35E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 PANTHER PTHR33751:SF3 1 202 1.3E-61 T 23-04-2016 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 Pfam PF00034 Cytochrome c 25 98 6.9E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 Pfam PF00034 Cytochrome c 123 200 6.4E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01305 40075b2500cf7ded0d0fecb406b57ecd 202 PIRSF PIRSF000005 1 202 6.6E-66 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 MSIP34_RS10440 12f0eab2f104bd29f80077e34a531df3 166 Gene3D G3DSA:3.40.630.30 32 153 1.2E-11 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS10440 12f0eab2f104bd29f80077e34a531df3 166 SUPERFAMILY SSF55729 32 153 4.61E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS10440 12f0eab2f104bd29f80077e34a531df3 166 Pfam PF13508 Acetyltransferase (GNAT) domain 67 149 5.6E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS04130 a9a1edb6c9ecb36813eb8f4ebf9e958d 182 Gene3D G3DSA:1.10.287.500 55 127 2.3E-4 T 23-04-2016 MSIP34_RS04130 a9a1edb6c9ecb36813eb8f4ebf9e958d 182 SUPERFAMILY SSF75708 41 142 1.44E-7 T 23-04-2016 MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 SUPERFAMILY SSF51306 26 145 9.59E-33 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 PANTHER PTHR33516:SF1 26 148 1.1E-41 T 23-04-2016 MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 Gene3D G3DSA:2.10.109.10 37 147 3.9E-42 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 75 86 5.8E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 103 115 5.8E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 64 74 5.8E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 PANTHER PTHR33516 26 148 1.1E-41 T 23-04-2016 MSIP34_RS08150 569b4116a67a2e32d90e5af0e43885cf 148 Pfam PF00717 Peptidase S24-like 67 128 2.9E-10 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS00755 35b1c080eb375649415d6b1b0b11bec6 311 PANTHER PTHR34308:SF1 1 311 6.0E-93 T 23-04-2016 MSIP34_RS00755 35b1c080eb375649415d6b1b0b11bec6 311 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 310 97.305 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 MSIP34_RS00755 35b1c080eb375649415d6b1b0b11bec6 311 PANTHER PTHR34308 1 311 6.0E-93 T 23-04-2016 MSIP34_RS00755 35b1c080eb375649415d6b1b0b11bec6 311 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 10 305 7.3E-62 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 MSIP34_RS00755 35b1c080eb375649415d6b1b0b11bec6 311 Pfam PF03186 CobD/Cbib protein 11 287 4.1E-92 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 MSIP34_RS07115 084271f4f7bdd5fb2ba5e06999497556 153 SUPERFAMILY SSF54637 7 148 3.4E-49 T 23-04-2016 IPR029069 HotDog domain MSIP34_RS07115 084271f4f7bdd5fb2ba5e06999497556 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 9 151 35.321 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 MSIP34_RS07115 084271f4f7bdd5fb2ba5e06999497556 153 Pfam PF07977 FabA-like domain 18 144 3.4E-38 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 MSIP34_RS07115 084271f4f7bdd5fb2ba5e06999497556 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 9 148 1.6E-59 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 MSIP34_RS07115 084271f4f7bdd5fb2ba5e06999497556 153 Gene3D G3DSA:3.10.129.10 4 149 9.8E-58 T 23-04-2016 IPR029069 HotDog domain MSIP34_RS07115 084271f4f7bdd5fb2ba5e06999497556 153 PANTHER PTHR30272 7 153 1.2E-78 T 23-04-2016 MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 PANTHER PTHR12029 6 247 1.6E-68 T 23-04-2016 MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 247 42.165 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 Gene3D G3DSA:3.30.1330.30 1 77 7.1E-21 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 SUPERFAMILY SSF55315 2 77 1.18E-16 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 SMART SM00967 6 83 2.3E-15 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 246 9.9E-71 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 Gene3D G3DSA:3.40.1280.10 96 247 3.9E-54 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 Pfam PF00588 SpoU rRNA Methylase family 100 240 4.4E-38 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 SUPERFAMILY SSF75217 90 247 1.05E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS08720 7f4abcae9bb149ecf8420a1a5d5d4de0 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 77 2.0E-15 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 MSIP34_RS09520 4896300be83988bec3c98ef6df3c5cc7 140 PANTHER PTHR33202 5 134 3.2E-43 T 23-04-2016 MSIP34_RS09520 4896300be83988bec3c98ef6df3c5cc7 140 Gene3D G3DSA:1.10.10.10 5 82 2.8E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09520 4896300be83988bec3c98ef6df3c5cc7 140 Pfam PF01475 Ferric uptake regulator family 10 129 4.2E-45 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 MSIP34_RS09520 4896300be83988bec3c98ef6df3c5cc7 140 SUPERFAMILY SSF46785 5 133 6.45E-44 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 PANTHER PTHR11079 7 325 6.0E-131 T 23-04-2016 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 PANTHER PTHR11079:SF73 7 325 6.0E-131 T 23-04-2016 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 SMART SM00363 18 84 0.0062 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 17 315 2.7E-98 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 Gene3D G3DSA:3.10.290.10 19 108 6.0E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 Pfam PF00849 RNA pseudouridylate synthase 93 243 4.8E-35 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 SUPERFAMILY SSF55120 78 315 1.09E-77 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 SUPERFAMILY SSF55174 17 70 1.06E-6 T 23-04-2016 MSIP34_RS08655 55b793115a438f45e58ff95ddf83f48b 353 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 136 150 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS07610 50c98b7f32682b080b9955229f931c4d 232 Gene3D G3DSA:3.20.20.70 1 228 2.4E-29 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07610 50c98b7f32682b080b9955229f931c4d 232 SUPERFAMILY SSF51366 1 228 1.35E-25 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS07610 50c98b7f32682b080b9955229f931c4d 232 Pfam PF00977 Histidine biosynthesis protein 3 222 6.0E-18 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 MSIP34_RS12685 1614a3567b76c5f4202f19adcbb25cae 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 21 52 5.1E-5 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS12685 1614a3567b76c5f4202f19adcbb25cae 187 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 135 1.6E-4 T 23-04-2016 IPR001451 Hexapeptide repeat MSIP34_RS12685 1614a3567b76c5f4202f19adcbb25cae 187 PANTHER PTHR13061 4 181 8.1E-71 T 23-04-2016 MSIP34_RS12685 1614a3567b76c5f4202f19adcbb25cae 187 Gene3D G3DSA:2.160.10.10 5 181 2.5E-45 T 23-04-2016 MSIP34_RS12685 1614a3567b76c5f4202f19adcbb25cae 187 SUPERFAMILY SSF51161 10 182 1.37E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 4.0E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 4.0E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Pfam PF00158 Sigma-54 interaction domain 142 308 4.4E-71 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 SMART SM00448 5 116 2.0E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Pfam PF00072 Response regulator receiver domain 7 116 1.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 SUPERFAMILY SSF52172 5 187 3.98E-46 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 SUPERFAMILY SSF46689 348 447 2.19E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 SMART SM00382 162 309 9.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Gene3D G3DSA:1.10.10.60 400 448 1.1E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 SUPERFAMILY SSF52540 142 377 4.14E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 348 357 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Gene3D G3DSA:1.10.8.60 315 384 1.3E-22 T 23-04-2016 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Gene3D G3DSA:3.40.50.300 140 314 1.7E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Gene3D G3DSA:3.40.50.2300 6 130 1.6E-37 T 23-04-2016 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 Pfam PF02954 Bacterial regulatory protein, Fis family 406 445 3.2E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS13175 91940e20a497f4597946763a932e4dc4 457 PANTHER PTHR32071 4 457 7.4E-198 T 23-04-2016 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 1 164 24.448 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 Gene3D G3DSA:2.30.30.240 94 164 4.7E-27 T 23-04-2016 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 PANTHER PTHR33692 1 164 1.5E-51 T 23-04-2016 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 Pfam PF01782 RimM N-terminal domain 4 85 2.5E-25 T 23-04-2016 IPR002676 RimM protein GO:0006364 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 SUPERFAMILY SSF50346 94 164 8.79E-21 T 23-04-2016 IPR011033 PRC-barrel-like MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 Gene3D G3DSA:2.40.30.60 1 88 6.8E-31 T 23-04-2016 IPR002676 RimM protein GO:0006364 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 Pfam PF05239 PRC-barrel domain 91 159 1.1E-8 T 23-04-2016 IPR027275 PRC-barrel domain MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 1 163 1.9E-51 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 MSIP34_RS12035 4e5fb14d226c98263b466704e6279579 164 SUPERFAMILY SSF50447 1 88 3.5E-22 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 SUPERFAMILY SSF47240 3 154 1.3E-50 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 4.6E-10 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 35 51 4.6E-10 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 4.6E-10 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 PANTHER PTHR30295:SF6 3 154 2.3E-66 T 23-04-2016 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 ProSitePatterns PS00819 Dps protein family signature 2. 61 75 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 ProSitePatterns PS00818 Dps protein family signature 1. 35 51 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 PIRSF PIRSF005900 1 154 1.3E-48 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 Pfam PF00210 Ferritin-like domain 16 154 1.3E-28 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 Gene3D G3DSA:1.20.1260.10 2 154 7.6E-66 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS06060 7ba40c05774fb79ecf17431b3869d816 154 PANTHER PTHR30295 3 154 2.3E-66 T 23-04-2016 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 SUPERFAMILY SSF63882 23 194 9.29E-58 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 PANTHER PTHR10192 24 426 1.0E-173 T 23-04-2016 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 196 331 1.0E-35 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Pfam PF03454 MoeA C-terminal region (domain IV) 351 422 1.4E-18 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Pfam PF03453 MoeA N-terminal region (domain I and II) 25 186 4.4E-37 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Gene3D G3DSA:2.40.340.10 347 420 1.4E-29 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 SUPERFAMILY SSF63867 346 425 7.59E-24 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Pfam PF00994 Probable molybdopterin binding domain 201 333 2.0E-28 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Gene3D G3DSA:3.40.980.10 182 346 3.0E-63 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 SMART SM00852 199 336 1.0E-43 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Gene3D G3DSA:3.90.105.10 150 181 3.5E-20 T 23-04-2016 MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 SUPERFAMILY SSF53218 196 340 1.05E-44 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS11735 fb9770568a9ab55b20f205a4587f0fd6 426 Gene3D G3DSA:2.170.190.11 67 149 2.8E-31 T 23-04-2016 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 Gene3D G3DSA:3.30.70.1150 59 138 6.9E-27 T 23-04-2016 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 SUPERFAMILY SSF47598 10 54 2.11E-10 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 Gene3D G3DSA:1.10.1220.10 11 54 1.3E-12 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 PANTHER PTHR34719:SF2 7 138 2.4E-38 T 23-04-2016 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 SUPERFAMILY SSF55021 60 138 2.75E-21 T 23-04-2016 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 10 140 22.688 T 23-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 Pfam PF01402 Ribbon-helix-helix protein, copG family 12 50 1.7E-8 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 Pfam PF08753 NikR C terminal nickel binding domain 62 137 5.9E-25 T 23-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal MSIP34_RS04835 f5d361bbb970f22f7096275da442f11f 157 PANTHER PTHR34719 7 138 2.4E-38 T 23-04-2016 MSIP34_RS06495 25e89aedbfbfbe67e0c8ef952062e3b7 309 PANTHER PTHR18964 2 301 8.8E-61 T 23-04-2016 MSIP34_RS06495 25e89aedbfbfbe67e0c8ef952062e3b7 309 Pfam PF00480 ROK family 3 302 1.5E-64 T 23-04-2016 IPR000600 ROK family MSIP34_RS06495 25e89aedbfbfbe67e0c8ef952062e3b7 309 Gene3D G3DSA:3.30.420.40 145 286 4.6E-44 T 23-04-2016 MSIP34_RS06495 25e89aedbfbfbe67e0c8ef952062e3b7 309 SUPERFAMILY SSF53067 2 303 2.06E-55 T 23-04-2016 MSIP34_RS06495 25e89aedbfbfbe67e0c8ef952062e3b7 309 PANTHER PTHR18964:SF123 2 301 8.8E-61 T 23-04-2016 MSIP34_RS06495 25e89aedbfbfbe67e0c8ef952062e3b7 309 Gene3D G3DSA:3.30.420.40 2 144 1.1E-36 T 23-04-2016 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 Gene3D G3DSA:3.30.565.10 762 924 7.0E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 Gene3D G3DSA:3.40.50.2300 941 1051 8.4E-25 T 23-04-2016 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 SMART SM00387 808 919 2.4E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 PANTHER PTHR24423 647 1096 1.3E-112 T 23-04-2016 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 PANTHER PTHR24423 19 31 1.3E-112 T 23-04-2016 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 SMART SM00388 695 761 6.1E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 Pfam PF00512 His Kinase A (phospho-acceptor) domain 695 761 8.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 SUPERFAMILY SSF55874 752 915 1.02E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 Pfam PF00072 Response regulator receiver domain 944 1050 5.6E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 SUPERFAMILY SSF47384 681 762 3.53E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 858 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 862 872 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 897 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 PRINTS PR00344 Bacterial sensor protein C-terminal signature 903 916 1.5E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 SMART SM00448 942 1054 1.2E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 SUPERFAMILY SSF52172 940 1063 3.42E-26 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 809 917 2.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03635 fb4b313a0253568b52beeb1c2e04c41f 1151 Gene3D G3DSA:1.10.287.130 689 757 2.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS08755 6b6c2245003fadf1b0da929b9ca24607 378 PANTHER PTHR11228:SF26 25 327 1.9E-99 T 23-04-2016 MSIP34_RS08755 6b6c2245003fadf1b0da929b9ca24607 378 SMART SM00729 78 306 1.2E-4 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS08755 6b6c2245003fadf1b0da929b9ca24607 378 SUPERFAMILY SSF102114 59 277 2.88E-14 T 23-04-2016 MSIP34_RS08755 6b6c2245003fadf1b0da929b9ca24607 378 Gene3D G3DSA:3.20.20.70 81 266 1.0E-8 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS08755 6b6c2245003fadf1b0da929b9ca24607 378 Pfam PF04055 Radical SAM superfamily 82 260 3.2E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS08755 6b6c2245003fadf1b0da929b9ca24607 378 PANTHER PTHR11228 25 327 1.9E-99 T 23-04-2016 MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 Gene3D G3DSA:3.40.50.720 2 254 3.0E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.0E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PANTHER PTHR24322 11 144 9.8E-58 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PANTHER PTHR24322 160 192 9.8E-58 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PANTHER PTHR24322:SF317 11 144 9.8E-58 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PANTHER PTHR24322:SF317 160 192 9.8E-58 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 1.5E-87 T 23-04-2016 MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 PIRSF PIRSF000094 1 261 4.9E-115 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 MSIP34_RS07400 b21240caf5fb63bb1665c2b16471e157 261 SUPERFAMILY SSF51735 6 254 8.2E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 PANTHER PTHR30012 9 403 8.9E-160 T 23-04-2016 MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 3.8E-32 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 Pfam PF00482 Type II secretion system (T2SS), protein F 69 192 1.3E-32 T 23-04-2016 IPR018076 Type II secretion system F domain MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 1.5E-17 T 23-04-2016 IPR003004 GspF/PilC family MSIP34_RS02980 acb01d1d6cd64a9fdcc266ae4f17572e 403 PANTHER PTHR30012:SF0 9 403 8.9E-160 T 23-04-2016 MSIP34_RS13290 72ab30c38c2b3b5c671a4d2c2c94f832 309 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 40 129 7.5E-5 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 MSIP34_RS13290 72ab30c38c2b3b5c671a4d2c2c94f832 309 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 171 263 3.7E-9 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 MSIP34_RS13290 72ab30c38c2b3b5c671a4d2c2c94f832 309 PANTHER PTHR30212:SF3 3 287 3.3E-38 T 23-04-2016 MSIP34_RS13290 72ab30c38c2b3b5c671a4d2c2c94f832 309 PANTHER PTHR30212 3 287 3.3E-38 T 23-04-2016 MSIP34_RS13290 72ab30c38c2b3b5c671a4d2c2c94f832 309 Gene3D G3DSA:2.30.110.10 168 265 1.2E-8 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS13290 72ab30c38c2b3b5c671a4d2c2c94f832 309 Gene3D G3DSA:2.30.110.10 39 140 2.4E-4 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS05880 fbc8891bf4d1215e83bc1aaaea07e4bf 402 PANTHER PTHR11730 1 392 1.3E-122 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 MSIP34_RS05880 fbc8891bf4d1215e83bc1aaaea07e4bf 402 Gene3D G3DSA:1.10.3430.10 2 374 2.2E-91 T 23-04-2016 IPR029020 Ammonium/urea transporter MSIP34_RS05880 fbc8891bf4d1215e83bc1aaaea07e4bf 402 ProSitePatterns PS01219 Ammonium transporters signature. 156 181 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 MSIP34_RS05880 fbc8891bf4d1215e83bc1aaaea07e4bf 402 Pfam PF00909 Ammonium Transporter Family 11 389 1.5E-86 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MSIP34_RS05880 fbc8891bf4d1215e83bc1aaaea07e4bf 402 PANTHER PTHR11730:SF6 1 392 1.3E-122 T 23-04-2016 MSIP34_RS05880 fbc8891bf4d1215e83bc1aaaea07e4bf 402 SUPERFAMILY SSF111352 7 374 2.62E-93 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 Pfam PF02355 Protein export membrane protein 107 291 2.3E-65 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 PANTHER PTHR30081 1 298 3.6E-73 T 23-04-2016 MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 Gene3D G3DSA:1.20.1640.10 103 294 3.8E-28 T 23-04-2016 MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 SUPERFAMILY SSF82866 73 291 1.24E-39 T 23-04-2016 MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 2.9E-30 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 2.9E-30 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 2.9E-30 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 2.9E-30 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 Pfam PF07549 SecD/SecF GG Motif 32 55 8.1E-10 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 105 280 1.4E-50 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 5.1E-78 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 MSIP34_RS11235 1c31aa97a34a4997c485e831807ab37d 312 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 29.381 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 Gene3D G3DSA:3.30.450.90 392 521 1.7E-40 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 SUPERFAMILY SSF160246 155 217 1.31E-6 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 SUPERFAMILY SSF52540 409 814 4.87E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 PANTHER PTHR30258:SF1 726 816 2.5E-200 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 PANTHER PTHR30258:SF1 205 710 2.5E-200 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 SUPERFAMILY SSF160246 214 354 7.85E-38 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 616 630 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 Gene3D G3DSA:3.40.50.300 526 815 7.2E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 252 356 4.1E-21 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 PANTHER PTHR30258 726 816 2.5E-200 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 PANTHER PTHR30258 205 710 2.5E-200 T 23-04-2016 MSIP34_RS03725 dfebdbd5582d232dcd7fae6ede3247cf 816 Pfam PF00437 Type II/IV secretion system protein 419 687 8.5E-73 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS07920 a37e066c5b8ec0ac3db80988752d2246 103 Gene3D G3DSA:2.60.120.10 10 102 1.2E-37 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS07920 a37e066c5b8ec0ac3db80988752d2246 103 Pfam PF06865 Protein of unknown function (DUF1255) 11 102 5.3E-37 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 MSIP34_RS07920 a37e066c5b8ec0ac3db80988752d2246 103 SUPERFAMILY SSF51182 11 102 2.94E-33 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS07920 a37e066c5b8ec0ac3db80988752d2246 103 PANTHER PTHR36540 2 103 4.5E-29 T 23-04-2016 MSIP34_RS07920 a37e066c5b8ec0ac3db80988752d2246 103 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 10 103 27.097 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 MSIP34_RS07920 a37e066c5b8ec0ac3db80988752d2246 103 PANTHER PTHR36540:SF1 2 103 4.5E-29 T 23-04-2016 MSIP34_RS06350 81fab192c637efa6ee04fdcfec7eedf8 286 PANTHER PTHR23088 8 284 3.3E-101 T 23-04-2016 MSIP34_RS06350 81fab192c637efa6ee04fdcfec7eedf8 286 SUPERFAMILY SSF56317 21 284 3.92E-77 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS06350 81fab192c637efa6ee04fdcfec7eedf8 286 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 171 191 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site MSIP34_RS06350 81fab192c637efa6ee04fdcfec7eedf8 286 PANTHER PTHR23088:SF27 8 284 3.3E-101 T 23-04-2016 MSIP34_RS06350 81fab192c637efa6ee04fdcfec7eedf8 286 Pfam PF00795 Carbon-nitrogen hydrolase 24 271 1.1E-55 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS06350 81fab192c637efa6ee04fdcfec7eedf8 286 Gene3D G3DSA:3.60.110.10 16 284 3.1E-80 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 Gene3D G3DSA:1.10.455.10 7 156 2.3E-63 T 23-04-2016 IPR023798 Ribosomal protein S7 domain MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 PIRSF PIRSF002122 3 156 2.4E-57 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 SUPERFAMILY SSF47973 2 149 2.49E-59 T 23-04-2016 IPR023798 Ribosomal protein S7 domain MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-65 T 23-04-2016 IPR023798 Ribosomal protein S7 domain MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 8.1E-65 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 PANTHER PTHR11205 1 156 2.4E-86 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 MSIP34_RS01560 881969c50528297d9b987c6255b179b3 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.628 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 MSIP34_RS02215 9b4393fd6d83aa9f7d8b115c94b3f6e1 140 PANTHER PTHR34352 1 139 3.9E-52 T 23-04-2016 MSIP34_RS02215 9b4393fd6d83aa9f7d8b115c94b3f6e1 140 Gene3D G3DSA:3.30.300.20 39 136 3.8E-43 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta MSIP34_RS02215 9b4393fd6d83aa9f7d8b115c94b3f6e1 140 Gene3D G3DSA:2.20.25.10 1 34 2.3E-17 T 23-04-2016 MSIP34_RS02215 9b4393fd6d83aa9f7d8b115c94b3f6e1 140 SUPERFAMILY SSF82784 1 137 3.27E-42 T 23-04-2016 IPR003718 OsmC/Ohr family MSIP34_RS02215 9b4393fd6d83aa9f7d8b115c94b3f6e1 140 Pfam PF02566 OsmC-like protein 34 131 1.1E-17 T 23-04-2016 IPR003718 OsmC/Ohr family MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SUPERFAMILY SSF55785 152 254 1.92E-24 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SUPERFAMILY SSF55785 30 132 1.43E-24 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SUPERFAMILY SSF58104 282 564 1.96E-70 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 Gene3D G3DSA:3.30.450.20 31 134 9.4E-23 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 Gene3D G3DSA:3.30.450.20 153 256 5.7E-23 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SMART SM00283 316 563 3.7E-90 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 Gene3D G3DSA:1.10.287.950 331 535 2.2E-61 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PANTHER PTHR24422 2 334 2.6E-147 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PANTHER PTHR24422 390 546 2.6E-147 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 337 366 1.6E-52 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 1.6E-52 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.6E-52 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 441 1.6E-52 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 Pfam PF08447 PAS fold 43 128 9.4E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 Pfam PF08447 PAS fold 165 250 2.8E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PANTHER PTHR24422:SF12 2 334 2.6E-147 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 PANTHER PTHR24422:SF12 390 546 2.6E-147 T 23-04-2016 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SMART SM00091 140 210 0.2 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SMART SM00091 20 88 0.0068 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 377 562 2.1E-59 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SMART SM00086 93 135 0.0017 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 SMART SM00086 215 257 3.2E-4 T 23-04-2016 IPR001610 PAC motif MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 261 2.4E-15 T 23-04-2016 IPR000014 PAS domain MSIP34_RS13375 72ed3f5d5174b20f748bac1f9c88a920 581 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 135 1.8E-14 T 23-04-2016 IPR000014 PAS domain MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 Pfam PF00565 Staphylococcal nuclease homologue 49 150 4.4E-22 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 PANTHER PTHR12302:SF0 24 178 5.4E-35 T 23-04-2016 MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 PANTHER PTHR12302 24 178 5.4E-35 T 23-04-2016 MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 SUPERFAMILY SSF50199 22 157 5.1E-34 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 Gene3D G3DSA:2.40.50.90 23 157 5.4E-31 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 ProSitePatterns PS01123 Thermonuclease family signature 1. 34 59 - T 23-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 MSIP34_RS10550 b2729e377bc150aec45a5ca834fc5584 184 SMART SM00318 23 150 3.0E-24 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 SMART SM00072 2 184 3.8E-67 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 Gene3D G3DSA:3.40.50.300 2 25 1.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 Gene3D G3DSA:3.40.50.300 85 200 1.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 36.421 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 Gene3D G3DSA:3.30.63.10 33 84 4.3E-27 T 23-04-2016 MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.2E-73 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 PANTHER PTHR23117:SF13 1 202 8.7E-91 T 23-04-2016 MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 Pfam PF00625 Guanylate kinase 4 182 5.0E-53 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 SUPERFAMILY SSF52540 3 186 7.07E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00255 321a0de02fa91fc1df748dffc89d2029 202 PANTHER PTHR23117 1 202 8.7E-91 T 23-04-2016 MSIP34_RS07030 e1e8b0f9dca4ceec364ff6f5e0c74fdc 334 PANTHER PTHR30518 3 334 1.6E-88 T 23-04-2016 MSIP34_RS07030 e1e8b0f9dca4ceec364ff6f5e0c74fdc 334 Gene3D G3DSA:3.30.160.60 298 328 6.9E-16 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 MSIP34_RS07030 e1e8b0f9dca4ceec364ff6f5e0c74fdc 334 PANTHER PTHR30518:SF2 3 334 1.6E-88 T 23-04-2016 MSIP34_RS07030 e1e8b0f9dca4ceec364ff6f5e0c74fdc 334 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 7 326 1.6E-87 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like MSIP34_RS07030 e1e8b0f9dca4ceec364ff6f5e0c74fdc 334 Pfam PF02618 YceG-like family 39 323 1.9E-86 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 PANTHER PTHR11603 1 338 4.2E-46 T 23-04-2016 MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 3.9E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 44 62 3.9E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 PIRSF PIRSF002849 1 338 1.1E-77 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 Gene3D G3DSA:1.10.8.300 214 329 1.4E-25 T 23-04-2016 MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 SMART SM00382 40 184 0.0086 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 43 176 5.1E-25 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 Gene3D G3DSA:3.40.50.300 24 191 5.2E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04440 bab64711b4a1b92b4986bf8c055252e0 338 SUPERFAMILY SSF52540 4 309 2.73E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13325 69a2bf491aa31971cd1cfbfa6dba0eb7 106 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 104 1.2E-28 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB MSIP34_RS13325 69a2bf491aa31971cd1cfbfa6dba0eb7 106 PANTHER PTHR35893 1 105 4.1E-23 T 23-04-2016 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 6.3E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 Pfam PF00072 Response regulator receiver domain 3 112 4.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 SUPERFAMILY SSF52172 1 172 1.1E-38 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 Gene3D G3DSA:3.40.50.2300 1 121 3.3E-38 T 23-04-2016 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 SMART SM00862 145 218 1.9E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 PANTHER PTHR26402 1 219 1.1E-84 T 23-04-2016 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 Gene3D G3DSA:1.10.10.10 125 220 2.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 SMART SM00448 1 112 1.2E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS12435 4433f883e1147d4c8ac28c8fe27d8ba4 223 PANTHER PTHR26402:SF279 1 219 1.1E-84 T 23-04-2016 MSIP34_RS12070 c4ae375f3f2f9fd768a9739dcad77c34 260 Gene3D G3DSA:3.30.1150.10 145 259 1.2E-15 T 23-04-2016 MSIP34_RS12070 c4ae375f3f2f9fd768a9739dcad77c34 260 Pfam PF13103 TonB C terminal 170 242 3.3E-14 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS12070 c4ae375f3f2f9fd768a9739dcad77c34 260 SUPERFAMILY SSF74653 167 259 2.09E-12 T 23-04-2016 MSIP34_RS06345 88096b78051269f3c70cda77d9ee2ac3 491 PIRSF PIRSF004919 32 491 2.3E-138 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS06345 88096b78051269f3c70cda77d9ee2ac3 491 PANTHER PTHR30624 24 490 1.8E-228 T 23-04-2016 MSIP34_RS06345 88096b78051269f3c70cda77d9ee2ac3 491 Pfam PF01523 Putative modulator of DNA gyrase 50 342 1.6E-65 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS06345 88096b78051269f3c70cda77d9ee2ac3 491 SUPERFAMILY SSF111283 37 490 3.01E-133 T 23-04-2016 MSIP34_RS06345 88096b78051269f3c70cda77d9ee2ac3 491 PANTHER PTHR30624:SF4 24 490 1.8E-228 T 23-04-2016 MSIP34_RS12440 fd2f9a77d9eabcbc01d5b837b4b73f2f 148 PANTHER PTHR36929 5 148 8.5E-25 T 23-04-2016 MSIP34_RS12440 fd2f9a77d9eabcbc01d5b837b4b73f2f 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 143 1.3E-28 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 MSIP34_RS12440 fd2f9a77d9eabcbc01d5b837b4b73f2f 148 Gene3D G3DSA:3.30.530.20 5 144 1.1E-40 T 23-04-2016 IPR023393 START-like domain MSIP34_RS12440 fd2f9a77d9eabcbc01d5b837b4b73f2f 148 PANTHER PTHR36929:SF1 5 148 8.5E-25 T 23-04-2016 MSIP34_RS12440 fd2f9a77d9eabcbc01d5b837b4b73f2f 148 SUPERFAMILY SSF55961 2 144 1.14E-43 T 23-04-2016 MSIP34_RS07945 54b62e2c452246e99aa5867c74bd93b8 163 PIRSF PIRSF032086 4 162 9.9E-50 T 23-04-2016 IPR016988 Uncharacterised conserved protein UCP032086 MSIP34_RS07945 54b62e2c452246e99aa5867c74bd93b8 163 Pfam PF06181 Protein of unknown function (DUF989) 85 152 9.7E-11 T 23-04-2016 IPR010389 Domain of unknown function DUF989 MSIP34_RS12310 8769c21c8b34dd63142e7c102e09f1c7 365 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 16 364 4.4E-91 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 MSIP34_RS12310 8769c21c8b34dd63142e7c102e09f1c7 365 PANTHER PTHR30573:SF0 9 363 5.6E-138 T 23-04-2016 MSIP34_RS12310 8769c21c8b34dd63142e7c102e09f1c7 365 Pfam PF02445 Quinolinate synthetase A protein 22 363 4.1E-99 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 MSIP34_RS12310 8769c21c8b34dd63142e7c102e09f1c7 365 PANTHER PTHR30573 9 363 5.6E-138 T 23-04-2016 MSIP34_RS12310 8769c21c8b34dd63142e7c102e09f1c7 365 SUPERFAMILY SSF142754 27 363 1.7E-92 T 23-04-2016 MSIP34_RS12310 8769c21c8b34dd63142e7c102e09f1c7 365 Hamap MF_00569 Quinolinate synthase A [nadA]. 15 364 47.813 T 23-04-2016 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 Gene3D G3DSA:2.60.120.460 1 139 8.2E-47 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 139 9.2E-33 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 SUPERFAMILY SSF111038 1 139 5.49E-46 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 PANTHER PTHR30615:SF2 1 139 7.7E-90 T 23-04-2016 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 PIRSF PIRSF004681 1 139 5.3E-41 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 PANTHER PTHR30615 1 139 7.7E-90 T 23-04-2016 MSIP34_RS12145 246dd0a10905b6bf77b1c126a35fc1b5 139 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 2.7E-35 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS09580 ea2de3cd90163052021f931a40376177 365 SUPERFAMILY SSF53756 1 324 5.89E-61 T 23-04-2016 MSIP34_RS09580 ea2de3cd90163052021f931a40376177 365 Pfam PF13439 Glycosyltransferase Family 4 33 167 3.8E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS09580 ea2de3cd90163052021f931a40376177 365 PANTHER PTHR12526 106 323 4.3E-44 T 23-04-2016 MSIP34_RS09580 ea2de3cd90163052021f931a40376177 365 Pfam PF00534 Glycosyl transferases group 1 176 322 8.5E-32 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS09580 ea2de3cd90163052021f931a40376177 365 Gene3D G3DSA:3.40.50.2000 159 322 2.7E-28 T 23-04-2016 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 PANTHER PTHR24423 381 598 2.5E-24 T 23-04-2016 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 PANTHER PTHR24423 9 21 2.5E-24 T 23-04-2016 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 Pfam PF07695 7TM diverse intracellular signalling 172 371 2.6E-8 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 Pfam PF00512 His Kinase A (phospho-acceptor) domain 406 460 1.3E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 SUPERFAMILY SSF47384 400 452 2.55E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 SMART SM00387 504 615 7.6E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 SUPERFAMILY SSF55874 472 614 4.45E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 Gene3D G3DSA:3.30.565.10 479 614 2.6E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 600 2.0E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 Gene3D G3DSA:1.10.287.130 400 458 2.0E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS05915 674dd431c565f9018a83e26220043061 615 Pfam PF07696 7TMR-DISM extracellular 2 33 156 1.4E-22 T 23-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 SUPERFAMILY SSF55073 350 509 1.88E-50 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 SUPERFAMILY SSF141868 522 774 1.31E-84 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 345 503 9.5E-50 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 Gene3D G3DSA:3.30.70.270 346 515 8.0E-58 T 23-04-2016 MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 SMART SM00052 517 768 6.4E-107 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 PANTHER PTHR10799 216 621 3.1E-80 T 23-04-2016 MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 SMART SM00267 334 507 1.4E-62 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 Gene3D G3DSA:3.20.20.450 521 774 1.2E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 PANTHER PTHR10799:SF774 216 621 3.1E-80 T 23-04-2016 MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 342 505 8.1E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13875 ea762a5a27d308f0f9faf9aee0d488a9 782 Pfam PF00563 EAL domain 523 763 6.4E-72 T 23-04-2016 IPR001633 EAL domain MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 31 262 3.2E-43 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 Gene3D G3DSA:1.20.120.220 92 267 3.0E-51 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 PANTHER PTHR11410:SF7 14 267 7.7E-74 T 23-04-2016 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 SUPERFAMILY SSF81336 88 261 5.1E-43 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 PRINTS PR00123 ATP synthase A subunit signature 247 262 1.3E-11 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 PRINTS PR00123 ATP synthase A subunit signature 194 216 1.3E-11 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 PRINTS PR00123 ATP synthase A subunit signature 95 111 1.3E-11 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 Pfam PF00119 ATP synthase A chain 37 261 1.0E-56 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 267 14.358 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 ProSitePatterns PS00449 ATP synthase a subunit signature. 197 206 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site MSIP34_RS14140 ff41859c939d07594cf90a00e32bf0cc 267 PANTHER PTHR11410 14 267 7.7E-74 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 MSIP34_RS08305 23001bc846a7f2685adae4c12cae4891 156 Gene3D G3DSA:3.30.1330.70 1 142 7.6E-28 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 MSIP34_RS08305 23001bc846a7f2685adae4c12cae4891 156 SUPERFAMILY SSF103084 1 142 1.57E-15 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 MSIP34_RS08305 23001bc846a7f2685adae4c12cae4891 156 Pfam PF05866 Endodeoxyribonuclease RusA 8 140 1.1E-25 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 MSIP34_RS06510 2cd59e3a3d37c51f914c6abd5037d8dd 867 PANTHER PTHR16631 40 312 1.5E-57 T 23-04-2016 MSIP34_RS06510 2cd59e3a3d37c51f914c6abd5037d8dd 867 SUPERFAMILY SSF51445 51 302 1.97E-48 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS06510 2cd59e3a3d37c51f914c6abd5037d8dd 867 Gene3D G3DSA:3.20.20.80 43 303 2.6E-33 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 MSIP34_RS06510 2cd59e3a3d37c51f914c6abd5037d8dd 867 SUPERFAMILY SSF53448 413 682 4.69E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06510 2cd59e3a3d37c51f914c6abd5037d8dd 867 Gene3D G3DSA:3.90.550.10 423 664 2.8E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS06510 2cd59e3a3d37c51f914c6abd5037d8dd 867 Pfam PF13641 Glycosyltransferase like family 2 424 651 7.2E-32 T 23-04-2016 MSIP34_RS13450 e0a2308df81f6800d63ecc4c7b6ef5c0 221 Pfam PF00857 Isochorismatase family 15 164 5.4E-20 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS13450 e0a2308df81f6800d63ecc4c7b6ef5c0 221 PANTHER PTHR14119 6 203 1.5E-101 T 23-04-2016 MSIP34_RS13450 e0a2308df81f6800d63ecc4c7b6ef5c0 221 SUPERFAMILY SSF52499 8 203 1.02E-41 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS13450 e0a2308df81f6800d63ecc4c7b6ef5c0 221 PANTHER PTHR14119:SF1 6 203 1.5E-101 T 23-04-2016 MSIP34_RS13450 e0a2308df81f6800d63ecc4c7b6ef5c0 221 Gene3D G3DSA:3.40.50.850 7 205 1.2E-36 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 Gene3D G3DSA:1.10.150.120 74 151 1.5E-30 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 Pfam PF01799 [2Fe-2S] binding domain 72 145 2.2E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 PANTHER PTHR11908:SF66 1 134 1.0E-29 T 23-04-2016 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 PANTHER PTHR11908 1 134 1.0E-29 T 23-04-2016 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 SUPERFAMILY SSF54292 2 77 1.97E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 Gene3D G3DSA:3.10.20.30 2 73 1.8E-28 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 62 1.0E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS06980 2c8f1f103a6efa5d012e4de327ea1c71 156 SUPERFAMILY SSF47741 83 150 1.3E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 SUPERFAMILY SSF63892 1 238 3.92E-96 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 237 7.0E-90 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 Gene3D G3DSA:3.20.20.70 1 239 1.3E-104 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 236 1.0E-98 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 241 126.506 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 PANTHER PTHR30456:SF0 1 243 9.5E-133 T 23-04-2016 MSIP34_RS08990 5d5772eea2c10d8b4bd7ad20fe08e299 243 PANTHER PTHR30456 1 243 9.5E-133 T 23-04-2016 MSIP34_RS13935 517319c2738431cd7f8c5b2d68a1b55f 127 Gene3D G3DSA:2.60.40.1470 8 127 1.4E-47 T 23-04-2016 IPR007474 ApaG domain MSIP34_RS13935 517319c2738431cd7f8c5b2d68a1b55f 127 PANTHER PTHR14289 10 124 3.9E-50 T 23-04-2016 MSIP34_RS13935 517319c2738431cd7f8c5b2d68a1b55f 127 SUPERFAMILY SSF110069 8 127 1.23E-48 T 23-04-2016 IPR007474 ApaG domain MSIP34_RS13935 517319c2738431cd7f8c5b2d68a1b55f 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.302 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG MSIP34_RS13935 517319c2738431cd7f8c5b2d68a1b55f 127 Pfam PF04379 Protein of unknown function (DUF525) 20 104 5.9E-36 T 23-04-2016 IPR007474 ApaG domain MSIP34_RS02130 1017f4e38774a2bc54e40469134aebcc 330 PANTHER PTHR30273 16 324 5.4E-72 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS02130 1017f4e38774a2bc54e40469134aebcc 330 PANTHER PTHR30273:SF3 16 324 5.4E-72 T 23-04-2016 MSIP34_RS02130 1017f4e38774a2bc54e40469134aebcc 330 Pfam PF16220 Domain of unknown function (DUF4880) 24 69 1.7E-9 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS02130 1017f4e38774a2bc54e40469134aebcc 330 Pfam PF04773 FecR protein 118 209 2.0E-19 T 23-04-2016 IPR006860 FecR protein MSIP34_RS02130 1017f4e38774a2bc54e40469134aebcc 330 PIRSF PIRSF018266 14 323 5.3E-76 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS07660 f6feba11673a23278a0c4928030082d0 298 SUPERFAMILY SSF51735 113 229 8.99E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07660 f6feba11673a23278a0c4928030082d0 298 SUPERFAMILY SSF53223 4 98 1.9E-37 T 23-04-2016 MSIP34_RS07660 f6feba11673a23278a0c4928030082d0 298 Gene3D G3DSA:3.40.50.10280 4 130 3.6E-59 T 23-04-2016 IPR015259 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal KEGG: 00380+1.5.1.-|KEGG: 00524+1.5.1.-|KEGG: 00680+1.5.1.-|UniPathway: UPA00562 MSIP34_RS07660 f6feba11673a23278a0c4928030082d0 298 Pfam PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal 18 98 5.3E-38 T 23-04-2016 IPR015259 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal KEGG: 00380+1.5.1.-|KEGG: 00524+1.5.1.-|KEGG: 00680+1.5.1.-|UniPathway: UPA00562 MSIP34_RS07660 f6feba11673a23278a0c4928030082d0 298 Gene3D G3DSA:3.40.50.720 131 232 1.2E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 PANTHER PTHR21090 2 416 2.4E-204 T 23-04-2016 MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 405 2.3E-115 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 414 1.1E-179 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 46.601 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 Gene3D G3DSA:3.65.10.10 21 219 1.7E-71 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 SUPERFAMILY SSF55205 1 415 1.11E-142 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 MSIP34_RS01375 3cc691a67cfef9db02bdd9eecab3882f 416 Gene3D G3DSA:3.65.10.10 220 414 1.6E-61 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 34 212 2.7E-55 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 Pfam PF01171 PP-loop family 35 208 3.3E-58 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 PANTHER PTHR11807:SF2 34 445 1.3E-82 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 SMART SM00977 374 447 1.7E-26 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 SUPERFAMILY SSF82829 242 329 3.01E-17 T 23-04-2016 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 22 315 24.25 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 Pfam PF11734 TilS substrate C-terminal domain 374 447 4.0E-25 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 374 419 5.0E-13 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 Pfam PF09179 TilS substrate binding domain 256 326 2.4E-14 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 SUPERFAMILY SSF56037 337 448 1.26E-27 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 PANTHER PTHR11807 34 445 1.3E-82 T 23-04-2016 MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 Gene3D G3DSA:3.40.50.620 17 190 5.3E-16 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS08850 bb2201af3ef73481e4efe4ae3dbe19b0 456 SUPERFAMILY SSF52402 33 235 2.48E-58 T 23-04-2016 MSIP34_RS06120 074567a427f196fe4c6cc44bf9fa35fa 86 Hamap MF_01217 Acyl carrier protein [acpP]. 3 75 14.49 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 MSIP34_RS06120 074567a427f196fe4c6cc44bf9fa35fa 86 Gene3D G3DSA:1.10.1200.10 1 78 1.1E-21 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS06120 074567a427f196fe4c6cc44bf9fa35fa 86 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 73 0.002 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 MSIP34_RS06120 074567a427f196fe4c6cc44bf9fa35fa 86 SUPERFAMILY SSF47336 2 80 2.22E-16 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS06120 074567a427f196fe4c6cc44bf9fa35fa 86 Pfam PF00550 Phosphopantetheine attachment site 6 71 3.2E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 PANTHER PTHR33490:SF5 1 268 1.1E-78 T 23-04-2016 MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 SUPERFAMILY SSF54001 6 245 1.82E-41 T 23-04-2016 MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 PANTHER PTHR33490 1 268 1.1E-78 T 23-04-2016 MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 SMART SM00460 156 219 1.6E-18 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 Gene3D G3DSA:3.90.260.10 161 262 5.8E-12 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 4.3E-21 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal MSIP34_RS02280 3530e2eb2d7d84bd7b50870237bc8135 269 Pfam PF01841 Transglutaminase-like superfamily 121 216 6.8E-25 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 SUPERFAMILY SSF51735 1 194 4.33E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 SMART SM00984 300 387 2.7E-14 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 SUPERFAMILY SSF48179 192 287 5.44E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 2.7E-8 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-26 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 SUPERFAMILY SSF52413 283 387 2.09E-27 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 PIRSF PIRSF000124 1 388 1.3E-134 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 Gene3D G3DSA:3.40.50.720 285 388 6.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 Gene3D G3DSA:3.40.50.720 1 197 1.3E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 380 2.6E-102 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 4.4E-32 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 PANTHER PTHR11374 1 368 3.1E-229 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 Gene3D G3DSA:1.10.1040.10 198 284 3.0E-34 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 PANTHER PTHR11374:SF17 1 368 3.1E-229 T 23-04-2016 MSIP34_RS08745 b0cffd8a0d63ff4b6c0f7922da4e2bbd 388 PIRSF PIRSF500134 1 342 4.0E-118 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 MSIP34_RS05000 7947de89380af3d4d65b7cfae966141c 199 Pfam PF00881 Nitroreductase family 15 161 8.0E-26 T 23-04-2016 IPR029479 Nitroreductase MSIP34_RS05000 7947de89380af3d4d65b7cfae966141c 199 Gene3D G3DSA:3.40.109.10 11 190 4.1E-49 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS05000 7947de89380af3d4d65b7cfae966141c 199 SUPERFAMILY SSF55469 5 194 1.57E-47 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS05000 7947de89380af3d4d65b7cfae966141c 199 PANTHER PTHR23026 11 198 3.8E-35 T 23-04-2016 MSIP34_RS04125 3b11c6c9977d42135f90fdd79c00c1d6 316 Gene3D G3DSA:3.30.1330.60 166 276 7.6E-17 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS04125 3b11c6c9977d42135f90fdd79c00c1d6 316 PANTHER PTHR30329 1 299 5.9E-117 T 23-04-2016 MSIP34_RS04125 3b11c6c9977d42135f90fdd79c00c1d6 316 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 14 64 4.3E-18 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain MSIP34_RS04125 3b11c6c9977d42135f90fdd79c00c1d6 316 Pfam PF00691 OmpA family 171 261 1.6E-12 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS04125 3b11c6c9977d42135f90fdd79c00c1d6 316 PANTHER PTHR30329:SF2 1 299 5.9E-117 T 23-04-2016 MSIP34_RS04125 3b11c6c9977d42135f90fdd79c00c1d6 316 SUPERFAMILY SSF103088 168 275 1.03E-18 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 Gene3D G3DSA:3.20.20.70 13 443 5.9E-122 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 PIRSF PIRSF500061 2 444 6.3E-170 T 23-04-2016 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 Pfam PF01645 Conserved region in glutamate synthase 82 405 2.0E-85 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 SUPERFAMILY SSF51395 23 439 2.93E-92 T 23-04-2016 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 PIRSF PIRSF006429 2 443 2.7E-151 T 23-04-2016 IPR024188 Glutamate synthase large subunit-like protein MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 PANTHER PTHR11938 353 396 1.9E-52 T 23-04-2016 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 PANTHER PTHR11938 147 336 1.9E-52 T 23-04-2016 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 PANTHER PTHR11938:SF65 353 396 1.9E-52 T 23-04-2016 MSIP34_RS12175 ff21bb39611e57c7cb5adbc272ab3ac5 444 PANTHER PTHR11938:SF65 147 336 1.9E-52 T 23-04-2016 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.413 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.7E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 Pfam PF01165 Ribosomal protein S21 3 57 2.9E-21 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 PANTHER PTHR21109 1 60 9.7E-23 T 23-04-2016 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11985 a5a62ade077c8e694fd79e33e14582dc 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 59 2.0E-24 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS05005 a175806091fd89c137542b3b617a82f6 129 PANTHER PTHR10438 2 128 2.6E-25 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 MSIP34_RS05005 a175806091fd89c137542b3b617a82f6 129 PANTHER PTHR10438:SF266 2 128 2.6E-25 T 23-04-2016 MSIP34_RS05005 a175806091fd89c137542b3b617a82f6 129 Gene3D G3DSA:3.40.30.10 2 101 5.0E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS05005 a175806091fd89c137542b3b617a82f6 129 Pfam PF00085 Thioredoxin 3 100 8.0E-19 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 MSIP34_RS05005 a175806091fd89c137542b3b617a82f6 129 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 MSIP34_RS05005 a175806091fd89c137542b3b617a82f6 129 SUPERFAMILY SSF52833 2 102 1.99E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 248 33.45 T 23-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 SUPERFAMILY SSF53167 1 246 5.84E-79 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 Gene3D G3DSA:3.40.50.1580 2 246 3.5E-78 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 Pfam PF01048 Phosphorylase superfamily 2 243 5.9E-45 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 1 244 6.3E-84 T 23-04-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 PANTHER PTHR11904 3 243 3.0E-83 T 23-04-2016 IPR001369 PNP/MTAP phosphorylase MSIP34_RS07210 95a9309a5242d31e37f762d8c8f5ff30 248 PANTHER PTHR11904:SF1 3 243 3.0E-83 T 23-04-2016 MSIP34_RS01155 ce879551062d543713673d21d2ec1fd7 359 Pfam PF01594 Domain of unknown function DUF20 20 342 2.2E-51 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like MSIP34_RS01155 ce879551062d543713673d21d2ec1fd7 359 PANTHER PTHR21716 3 352 4.5E-57 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like MSIP34_RS01915 21715b31271ac3dc1b55add2eb4b9686 304 PANTHER PTHR11122 4 302 2.6E-80 T 23-04-2016 MSIP34_RS01915 21715b31271ac3dc1b55add2eb4b9686 304 Gene3D G3DSA:2.70.98.10 10 299 2.4E-89 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 MSIP34_RS01915 21715b31271ac3dc1b55add2eb4b9686 304 SUPERFAMILY SSF74650 21 297 1.0E-67 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 MSIP34_RS01915 21715b31271ac3dc1b55add2eb4b9686 304 PIRSF PIRSF016020 1 301 1.6E-65 T 23-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 MSIP34_RS01915 21715b31271ac3dc1b55add2eb4b9686 304 Pfam PF01263 Aldose 1-epimerase 29 299 6.2E-50 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Pfam PF00158 Sigma-54 interaction domain 149 314 2.2E-63 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Pfam PF02954 Bacterial regulatory protein, Fis family 436 470 1.3E-9 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 SUPERFAMILY SSF52172 8 193 8.54E-25 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Gene3D G3DSA:1.10.8.60 324 393 1.5E-14 T 23-04-2016 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Gene3D G3DSA:1.10.10.60 417 470 1.5E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 SMART SM00382 168 311 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 SUPERFAMILY SSF46689 363 470 1.4E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 SUPERFAMILY SSF52540 148 389 1.89E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 SMART SM00448 6 123 2.7E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 6.5E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 475 6.5E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Pfam PF00072 Response regulator receiver domain 9 122 7.0E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Gene3D G3DSA:3.40.50.300 147 320 3.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 Gene3D G3DSA:3.40.50.2300 9 136 3.3E-21 T 23-04-2016 MSIP34_RS00430 19a74658715b2828e49362fbd7d3e918 477 PANTHER PTHR32071 8 470 9.6E-138 T 23-04-2016 MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 Gene3D G3DSA:1.10.10.10 11 98 8.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 Pfam PF01022 Bacterial regulatory protein, arsR family 23 66 2.7E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 SMART SM00418 16 95 2.8E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 SUPERFAMILY SSF46785 12 96 3.22E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 9.7E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 9.7E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 9.7E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS13895 7cd869f4e33bc2e3c0e8c1cc0610d62c 101 PANTHER PTHR33154 1 97 1.5E-15 T 23-04-2016 MSIP34_RS12695 f5da88119827c52b732c192f47a15077 206 PANTHER PTHR10108 17 178 1.9E-50 T 23-04-2016 MSIP34_RS12695 f5da88119827c52b732c192f47a15077 206 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 15 202 1.2E-77 T 23-04-2016 IPR010743 Methionine biosynthesis MetW MSIP34_RS12695 f5da88119827c52b732c192f47a15077 206 Pfam PF07021 Methionine biosynthesis protein MetW 15 202 2.5E-75 T 23-04-2016 IPR010743 Methionine biosynthesis MetW MSIP34_RS12695 f5da88119827c52b732c192f47a15077 206 Gene3D G3DSA:3.40.50.150 16 179 4.4E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12695 f5da88119827c52b732c192f47a15077 206 SUPERFAMILY SSF53335 18 183 3.82E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS12695 f5da88119827c52b732c192f47a15077 206 PANTHER PTHR10108:SF831 17 178 1.9E-50 T 23-04-2016 MSIP34_RS11980 ff891672f626b210fb0dd0dec228bd6c 148 Gene3D G3DSA:1.10.10.410 91 147 2.1E-22 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal MSIP34_RS11980 ff891672f626b210fb0dd0dec228bd6c 148 PANTHER PTHR28055 2 148 1.5E-49 T 23-04-2016 MSIP34_RS11980 ff891672f626b210fb0dd0dec228bd6c 148 SUPERFAMILY SSF89095 2 147 1.67E-43 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 MSIP34_RS11980 ff891672f626b210fb0dd0dec228bd6c 148 Pfam PF09424 Yqey-like protein 5 146 4.0E-55 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial MSIP34_RS11980 ff891672f626b210fb0dd0dec228bd6c 148 PANTHER PTHR28055:SF1 2 148 1.5E-49 T 23-04-2016 MSIP34_RS11980 ff891672f626b210fb0dd0dec228bd6c 148 Gene3D G3DSA:1.10.1510.10 2 90 3.4E-32 T 23-04-2016 MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 PANTHER PTHR11465:SF16 49 328 3.3E-68 T 23-04-2016 MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 SMART SM01060 26 329 4.4E-9 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 PIRSF PIRSF000296 3 329 9.4E-110 T 23-04-2016 IPR024168 Catalase, SrpA-type, predicted MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 SUPERFAMILY SSF56634 33 328 5.63E-76 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 PANTHER PTHR11465 49 328 3.3E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 Pfam PF00199 Catalase 49 321 2.7E-29 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS13420 caa1528e3fc94850ae00007be4d59161 329 Gene3D G3DSA:2.40.180.10 14 328 6.6E-91 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 PANTHER PTHR12553 1 202 3.7E-24 T 23-04-2016 MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 195 208 1.5E-10 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 81 102 1.5E-10 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 49 67 1.5E-10 T 23-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 SMART SM00849 17 188 1.7E-8 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 SUPERFAMILY SSF56281 1 234 3.14E-42 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 Gene3D G3DSA:3.60.15.10 1 227 1.4E-34 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS03055 d6744e21809abedbaf03e70e8f041e53 254 Pfam PF12706 Beta-lactamase superfamily domain 27 198 7.8E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 Gene3D G3DSA:2.40.170.20 176 771 2.2E-94 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 754 771 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 SUPERFAMILY SSF56935 39 771 1.71E-118 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 166 6.8E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 PANTHER PTHR32552:SF33 487 636 1.3E-178 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 PANTHER PTHR32552:SF33 653 771 1.3E-178 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 PANTHER PTHR32552:SF33 12 463 1.3E-178 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 Gene3D G3DSA:2.170.130.10 38 175 1.2E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 PANTHER PTHR32552 487 636 1.3E-178 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 PANTHER PTHR32552 653 771 1.3E-178 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 PANTHER PTHR32552 12 463 1.3E-178 T 23-04-2016 MSIP34_RS08965 774bf14b68d9553f734acfbbcfa3b3bd 771 Pfam PF00593 TonB dependent receptor 499 769 1.4E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 PANTHER PTHR30065 2 253 4.7E-74 T 23-04-2016 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 PANTHER PTHR30065:SF1 2 253 4.7E-74 T 23-04-2016 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 252 2.0E-68 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.4E-29 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 4.4E-29 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 4.4E-29 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 4.4E-29 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MSIP34_RS03925 eb7f496df8590fa7cfd86d011bfdac5e 256 Pfam PF01311 Bacterial export proteins, family 1 14 247 1.5E-69 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 MSIP34_RS02055 c5cb1658d3d52f8ba4a2ecb2751fcac5 127 Pfam PF11604 Copper binding periplasmic protein CusF 49 114 9.4E-23 T 23-04-2016 IPR021647 Copper binding periplasmic protein CusF MSIP34_RS12990 76a4134420f996fe3e1e0f74e17e6de0 274 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 274 1.7E-47 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 MSIP34_RS12990 76a4134420f996fe3e1e0f74e17e6de0 274 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 28 274 6.7E-65 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PANTHER PTHR30161:SF1 1 692 0.0 T 23-04-2016 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 17 688 7.8E-272 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 3.1E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PANTHER PTHR30161 1 692 0.0 T 23-04-2016 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 Pfam PF00771 FHIPEP family 28 680 4.3E-270 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 PIRSF PIRSF005419 5 693 1.7E-253 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 MSIP34_RS04035 3b2c68ba909b61a03db0519cf99446dc 693 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 23-04-2016 IPR025505 FHIPEP conserved site MSIP34_RS05665 62872eb151267cad20d9aaddbbc79f50 231 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 42 225 3.0E-60 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MSIP34_RS05665 62872eb151267cad20d9aaddbbc79f50 231 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 45 215 3.3E-75 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MSIP34_RS05665 62872eb151267cad20d9aaddbbc79f50 231 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 231 94.892 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MSIP34_RS05665 62872eb151267cad20d9aaddbbc79f50 231 PANTHER PTHR30098 17 223 2.7E-70 T 23-04-2016 MSIP34_RS05665 62872eb151267cad20d9aaddbbc79f50 231 SUPERFAMILY SSF55729 17 226 6.36E-91 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS05320 4a21868b5557206ca25e505def238dff 453 Pfam PF02417 Chromate transporter 22 185 1.3E-36 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 MSIP34_RS05320 4a21868b5557206ca25e505def238dff 453 Pfam PF02417 Chromate transporter 261 446 2.7E-32 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 MSIP34_RS05320 4a21868b5557206ca25e505def238dff 453 PANTHER PTHR33567 16 446 6.6E-111 T 23-04-2016 MSIP34_RS05320 4a21868b5557206ca25e505def238dff 453 PANTHER PTHR33567:SF1 16 446 6.6E-111 T 23-04-2016 MSIP34_RS05320 4a21868b5557206ca25e505def238dff 453 PIRSF PIRSF004810 3 452 1.5E-125 T 23-04-2016 IPR014047 Chromate transporter, long chain MSIP34_RS05320 4a21868b5557206ca25e505def238dff 453 TIGRFAM TIGR00937 2A51: chromate efflux transporter 28 445 6.0E-68 T 23-04-2016 IPR014047 Chromate transporter, long chain MSIP34_RS11650 e8afe85f45087fc63cbb8bc14642ef8d 98 Pfam PF12112 Protein of unknown function (DUF3579) 5 88 1.6E-32 T 23-04-2016 IPR021969 Protein of unknown function DUF3579 MSIP34_RS08630 245e683f90270397d37453e3f7f9f8fb 264 PANTHER PTHR16950 28 264 1.3E-43 T 23-04-2016 MSIP34_RS08630 245e683f90270397d37453e3f7f9f8fb 264 PANTHER PTHR16950:SF16 28 264 1.3E-43 T 23-04-2016 MSIP34_RS08630 245e683f90270397d37453e3f7f9f8fb 264 Pfam PF02535 ZIP Zinc transporter 92 257 3.7E-30 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 MSIP34_RS11515 cc40d13bb2684dae1c83ae86162b0dba 121 Pfam PF13642 protein structure with unknown function 12 112 3.6E-30 T 23-04-2016 IPR025284 Protein of unknown function DUF4144 MSIP34_RS02235 6a1ea2b11896af8bcd70b27940b07865 206 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 45 204 5.4E-43 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 MSIP34_RS02235 6a1ea2b11896af8bcd70b27940b07865 206 PANTHER PTHR11237 2 206 7.0E-96 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 MSIP34_RS02235 6a1ea2b11896af8bcd70b27940b07865 206 Gene3D G3DSA:1.20.1260.10 52 174 6.1E-11 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS02235 6a1ea2b11896af8bcd70b27940b07865 206 SUPERFAMILY SSF47240 44 176 7.0E-18 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS02235 6a1ea2b11896af8bcd70b27940b07865 206 PANTHER PTHR11237:SF3 2 206 7.0E-96 T 23-04-2016 MSIP34_RS02235 6a1ea2b11896af8bcd70b27940b07865 206 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 6 206 31.152 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 SUPERFAMILY SSF51905 265 376 9.16E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 SUPERFAMILY SSF51905 8 177 9.16E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 Gene3D G3DSA:3.50.50.60 266 353 8.3E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 Gene3D G3DSA:3.50.50.60 7 182 8.3E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 Pfam PF01494 FAD binding domain 6 336 2.1E-28 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.6E-17 T 23-04-2016 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.6E-17 T 23-04-2016 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.6E-17 T 23-04-2016 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.6E-17 T 23-04-2016 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 PANTHER PTHR13789:SF5 4 385 9.5E-89 T 23-04-2016 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 PANTHER PTHR13789 4 385 9.5E-89 T 23-04-2016 MSIP34_RS02970 04f619f2d4835306bd13fdc8020de5e3 386 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 384 1.7E-110 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 MSIP34_RS02290 1d707d20fa509002717693900304dd2d 638 Pfam PF01136 Peptidase family U32 79 305 7.6E-67 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS02290 1d707d20fa509002717693900304dd2d 638 Pfam PF12392 Collagenase 383 497 3.6E-20 T 23-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS02290 1d707d20fa509002717693900304dd2d 638 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS02290 1d707d20fa509002717693900304dd2d 638 PANTHER PTHR30217:SF10 1 619 1.3E-206 T 23-04-2016 MSIP34_RS02290 1d707d20fa509002717693900304dd2d 638 PANTHER PTHR30217 1 619 1.3E-206 T 23-04-2016 MSIP34_RS00785 7a20e956b8a7cdca96a551a7e9e9e883 223 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 206 8.8E-81 T 23-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 MSIP34_RS00785 7a20e956b8a7cdca96a551a7e9e9e883 223 SUPERFAMILY SSF55469 14 216 6.67E-50 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS00785 7a20e956b8a7cdca96a551a7e9e9e883 223 Gene3D G3DSA:3.40.109.10 8 214 9.5E-49 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS00785 7a20e956b8a7cdca96a551a7e9e9e883 223 Pfam PF00881 Nitroreductase family 18 182 1.8E-31 T 23-04-2016 IPR029479 Nitroreductase MSIP34_RS00785 7a20e956b8a7cdca96a551a7e9e9e883 223 PANTHER PTHR21712:SF31 1 212 1.9E-78 T 23-04-2016 MSIP34_RS00785 7a20e956b8a7cdca96a551a7e9e9e883 223 PANTHER PTHR21712 1 212 1.9E-78 T 23-04-2016 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Pfam PF01103 Surface antigen 452 782 8.5E-80 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 782 8.9E-266 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 10 782 25.324 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Pfam PF07244 Surface antigen variable number repeat 180 267 6.4E-18 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Pfam PF07244 Surface antigen variable number repeat 29 94 6.7E-6 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Pfam PF07244 Surface antigen variable number repeat 270 348 1.3E-13 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Pfam PF07244 Surface antigen variable number repeat 97 176 5.1E-12 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Pfam PF07244 Surface antigen variable number repeat 351 425 1.9E-15 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 PIRSF PIRSF006076 2 782 4.1E-259 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 PANTHER PTHR12815:SF11 12 782 5.5E-238 T 23-04-2016 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 Gene3D G3DSA:2.40.160.50 391 766 6.1E-34 T 23-04-2016 MSIP34_RS07130 b69669aa7402b1591cd240b25796dd67 782 PANTHER PTHR12815 12 782 5.5E-238 T 23-04-2016 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 160 1.2E-40 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 168 34.049 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 3.0E-21 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 PANTHER PTHR10884 24 178 5.2E-65 T 23-04-2016 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 SUPERFAMILY SSF143243 7 184 1.31E-53 T 23-04-2016 MSIP34_RS03440 0c2dab11e68d72fb2738ae9bdeb27191 198 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 31 158 4.4E-40 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 SUPERFAMILY SSF69189 272 364 2.75E-23 T 23-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 PANTHER PTHR21581:SF3 23 377 1.9E-104 T 23-04-2016 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 SUPERFAMILY SSF56601 3 272 7.96E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 SMART SM00936 272 362 3.1E-29 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 2.3E-17 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 2.3E-17 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 2.3E-17 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 251 1.7E-71 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 272 361 4.8E-24 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 Gene3D G3DSA:2.60.410.10 272 361 1.4E-25 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 Gene3D G3DSA:3.40.710.10 12 270 5.4E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS12770 b84c9b2b16edb90a8bf368d7d31d0628 378 PANTHER PTHR21581 23 377 1.9E-104 T 23-04-2016 MSIP34_RS01245 d9d73073c50c97c0aca59dfe16fcbb16 366 PANTHER PTHR33529 1 365 6.9E-75 T 23-04-2016 MSIP34_RS01245 d9d73073c50c97c0aca59dfe16fcbb16 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 347 2.9E-120 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 MSIP34_RS01245 d9d73073c50c97c0aca59dfe16fcbb16 366 PANTHER PTHR33529:SF2 1 365 6.9E-75 T 23-04-2016 MSIP34_RS01245 d9d73073c50c97c0aca59dfe16fcbb16 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 347 3.5E-67 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 2.8E-34 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 PANTHER PTHR37532 1 64 9.4E-30 T 23-04-2016 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 PANTHER PTHR37532:SF1 1 64 9.4E-30 T 23-04-2016 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 SUPERFAMILY SSF140319 1 62 1.44E-27 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 Gene3D G3DSA:1.10.10.600 1 64 1.1E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 PIRSF PIRSF039003 1 64 2.3E-34 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 MSIP34_RS04235 279877d8e37a13474a1c4e8c8865bb33 64 Pfam PF04384 Iron-sulphur cluster assembly 1 64 2.1E-33 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 SUPERFAMILY SSF47384 217 284 2.75E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 PANTHER PTHR24423 204 456 1.2E-30 T 23-04-2016 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 SUPERFAMILY SSF55874 300 454 2.23E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 SMART SM00387 335 456 8.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 455 3.1E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 Gene3D G3DSA:1.10.287.130 224 284 5.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 1.5E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 1.5E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 1.5E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 284 1.5E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 SMART SM00388 227 292 1.4E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS02725 0d503cd9734fbdea6cb3897d74821a1b 460 Gene3D G3DSA:3.30.565.10 301 456 9.7E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS06870 dcc478304bdf37218f8d91d2344f2f61 78 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 62 78 4.0E-4 T 23-04-2016 IPR019626 Stress-induced protein, KGG, repeat MSIP34_RS06870 dcc478304bdf37218f8d91d2344f2f61 78 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 9 30 3.0E-7 T 23-04-2016 IPR019626 Stress-induced protein, KGG, repeat MSIP34_RS06870 dcc478304bdf37218f8d91d2344f2f61 78 PANTHER PTHR36569 3 52 9.6E-17 T 23-04-2016 MSIP34_RS06870 dcc478304bdf37218f8d91d2344f2f61 78 PANTHER PTHR36569:SF2 3 52 9.6E-17 T 23-04-2016 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 SUPERFAMILY SSF47384 224 304 1.43E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 3.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 3.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 3.1E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 Gene3D G3DSA:1.10.287.130 233 302 4.9E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 459 3.4E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 Pfam PF08521 Two-component sensor kinase N-terminal 19 164 1.2E-29 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 SMART SM00387 353 463 7.4E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PANTHER PTHR24423:SF474 4 12 1.5E-68 T 23-04-2016 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PANTHER PTHR24423:SF474 182 459 1.5E-68 T 23-04-2016 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 Pfam PF00672 HAMP domain 173 236 3.3E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 241 304 8.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 Gene3D G3DSA:3.30.565.10 311 459 2.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 SMART SM00388 241 306 4.6E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PANTHER PTHR24423 4 12 1.5E-68 T 23-04-2016 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 PANTHER PTHR24423 182 459 1.5E-68 T 23-04-2016 MSIP34_RS12430 916e1205742be1b1e6e7b02323bd1110 471 SUPERFAMILY SSF55874 295 459 3.54E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SMART SM00304 207 259 0.0045 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SMART SM00304 570 637 79.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SMART SM00304 479 531 43.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SMART SM00304 388 440 3.9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SMART SM00283 578 825 1.0E-85 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 179 3.6E-8 T 23-04-2016 IPR024478 4HB MCP domain MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SUPERFAMILY SSF158472 208 257 3.14E-5 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 Pfam PF00672 HAMP domain 188 255 2.6E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 Gene3D G3DSA:1.10.287.950 593 797 7.2E-59 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 PANTHER PTHR32089 154 241 8.8E-130 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 PANTHER PTHR32089 560 828 8.8E-130 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 PANTHER PTHR32089:SF63 154 241 8.8E-130 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 PANTHER PTHR32089:SF63 560 828 8.8E-130 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 SUPERFAMILY SSF58104 598 826 1.05E-64 T 23-04-2016 MSIP34_RS05945 9a73fbeb015dec1d5935fee2bdb00c91 842 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 637 824 1.9E-56 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 Gene3D G3DSA:2.30.40.10 68 137 1.3E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 Hamap MF_01953 Urease subunit alpha [ureC]. 3 567 57.2 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 SUPERFAMILY SSF51338 3 178 3.46E-63 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 402 417 7.1E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 428 441 7.1E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 7.1E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 7.1E-35 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 Gene3D G3DSA:3.20.20.140 138 430 2.8E-215 T 23-04-2016 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 Gene3D G3DSA:3.20.20.140 488 565 2.8E-215 T 23-04-2016 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 1.0E-294 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 Pfam PF01979 Amidohydrolase family 126 455 2.7E-82 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PANTHER PTHR22642:SF7 321 502 6.0E-265 T 23-04-2016 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PANTHER PTHR22642:SF7 20 297 6.0E-265 T 23-04-2016 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 ProSitePatterns PS00145 Urease active site. 318 334 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 2.0E-54 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 SUPERFAMILY SSF51556 130 433 3.0E-202 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 SUPERFAMILY SSF51556 481 567 3.0E-202 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 SUPERFAMILY SSF51338 423 478 2.42E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PANTHER PTHR22642 321 502 6.0E-265 T 23-04-2016 MSIP34_RS03610 f72282bbb6515ca5bd355f1750cdadff 567 PANTHER PTHR22642 20 297 6.0E-265 T 23-04-2016 MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 PANTHER PTHR11751:SF314 83 464 1.3E-128 T 23-04-2016 MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 SUPERFAMILY SSF46785 2 70 9.68E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.5E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 Gene3D G3DSA:1.10.10.10 1 69 4.8E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 SUPERFAMILY SSF53383 96 462 1.48E-83 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 Gene3D G3DSA:3.40.640.10 143 355 1.3E-63 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 SMART SM00345 7 66 1.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 PANTHER PTHR11751 83 464 1.3E-128 T 23-04-2016 MSIP34_RS08110 22a2e85c499fc7c1f5b62ab8bf34a416 471 Pfam PF00155 Aminotransferase class I and II 144 457 3.1E-27 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS11445 b6567962605bf45cb9b7725516d1fd80 212 PANTHER PTHR16557 24 209 2.7E-50 T 23-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 MSIP34_RS11445 b6567962605bf45cb9b7725516d1fd80 212 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 33 209 1.5E-54 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like MSIP34_RS11445 b6567962605bf45cb9b7725516d1fd80 212 Gene3D G3DSA:2.60.120.590 24 211 1.5E-56 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like MSIP34_RS11445 b6567962605bf45cb9b7725516d1fd80 212 SUPERFAMILY SSF51197 21 210 8.1E-60 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 452 8.5E-53 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Gene3D G3DSA:3.20.20.450 470 720 1.8E-91 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Pfam PF00989 PAS fold 159 257 3.0E-12 T 23-04-2016 IPR013767 PAS fold GO:0006355 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SUPERFAMILY SSF52172 22 176 3.27E-37 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SUPERFAMILY SSF55073 301 459 1.1E-53 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Gene3D G3DSA:3.30.70.270 297 464 5.5E-61 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 456 3.9E-43 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Pfam PF00072 Response regulator receiver domain 24 132 6.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SUPERFAMILY SSF141868 472 720 2.35E-84 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SUPERFAMILY SSF55785 146 283 1.47E-20 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SMART SM00091 157 223 4.8E-12 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SMART SM00052 467 713 8.3E-110 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SMART SM00448 21 132 5.2E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 291 6.2E-19 T 23-04-2016 IPR000014 PAS domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Gene3D G3DSA:3.40.50.2300 22 149 4.0E-34 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Gene3D G3DSA:3.30.450.20 150 283 6.1E-25 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 Pfam PF00563 EAL domain 473 708 6.1E-68 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 PANTHER PTHR10799:SF774 176 547 1.3E-91 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 PANTHER PTHR10799:SF774 668 687 1.3E-91 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 SMART SM00267 285 457 1.2E-67 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 PANTHER PTHR10799 176 547 1.3E-91 T 23-04-2016 MSIP34_RS02115 a6d237e4969e29ae8f0b3c94e4534ccf 738 PANTHER PTHR10799 668 687 1.3E-91 T 23-04-2016 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 PANTHER PTHR11735:SF11 1 134 1.1E-43 T 23-04-2016 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 SUPERFAMILY SSF53067 104 211 1.55E-21 T 23-04-2016 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 213 4.9E-63 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 Pfam PF00814 Glycoprotease family 30 144 2.0E-32 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 Gene3D G3DSA:3.30.420.40 1 128 6.1E-41 T 23-04-2016 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 SUPERFAMILY SSF53067 1 100 1.34E-28 T 23-04-2016 MSIP34_RS11505 b637f15055eb6b7923a367b2f25f3547 230 PANTHER PTHR11735 1 134 1.1E-43 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1028 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376:SF32 4 551 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376 978 1166 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376 4 551 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 655 32.102 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 SUPERFAMILY SSF64484 1142 1372 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 SUPERFAMILY SSF64484 16 952 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Gene3D G3DSA:2.40.40.20 349 376 2.3E-37 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Gene3D G3DSA:2.40.40.20 417 489 2.3E-37 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 3.1E-29 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376 722 951 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376 570 702 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376:SF32 722 951 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376:SF32 570 702 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.2E-86 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 SMART SM00663 235 514 9.7E-182 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376:SF32 1311 1402 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376:SF32 978 1166 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376:SF32 1183 1270 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Gene3D G3DSA:2.40.50.100 1165 1217 8.6E-4 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Gene3D G3DSA:2.40.50.100 990 1019 2.8E-6 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376 1183 1270 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 PANTHER PTHR19376 1311 1402 0.0 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 2.2E-8 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 1.9E-27 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Gene3D G3DSA:2.40.50.100 1020 1058 9.2E-5 T 23-04-2016 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1384 10.487 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 771 2.5E-18 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01550 8871a0215382b1a52f831dc92302c3ba 1412 Pfam PF04998 RNA polymerase Rpb1, domain 5 774 1324 5.1E-72 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS08535 75458ba1355bd03bf7dceed7e29303a4 466 SUPERFAMILY SSF51717 122 329 2.35E-22 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 MSIP34_RS08535 75458ba1355bd03bf7dceed7e29303a4 466 PANTHER PTHR20941:SF11 111 329 1.9E-21 T 23-04-2016 MSIP34_RS08535 75458ba1355bd03bf7dceed7e29303a4 466 PANTHER PTHR20941 111 329 1.9E-21 T 23-04-2016 MSIP34_RS14075 5eff62f94dcd8532f8d4ae393c9ea3fb 201 SUPERFAMILY SSF110997 120 189 3.4E-18 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS14075 5eff62f94dcd8532f8d4ae393c9ea3fb 201 Gene3D G3DSA:3.30.70.1070 117 194 2.1E-21 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS14075 5eff62f94dcd8532f8d4ae393c9ea3fb 201 Pfam PF05036 Sporulation related domain 120 187 2.5E-15 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 2 231 1.4E-62 T 23-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 SUPERFAMILY SSF48452 25 204 8.91E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 Gene3D G3DSA:1.25.40.10 27 206 4.9E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 SMART SM00028 133 166 3.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 SMART SM00028 63 96 0.0017 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 SMART SM00028 29 62 0.17 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 Pfam PF13181 Tetratricopeptide repeat 135 164 0.14 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 PANTHER PTHR23083 29 240 1.3E-25 T 23-04-2016 MSIP34_RS08705 bdcd09ff258b785c9768c5174c17e584 246 Pfam PF13431 Tetratricopeptide repeat 86 115 1.6E-5 T 23-04-2016 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 PANTHER PTHR11544 1 67 1.7E-32 T 23-04-2016 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 SUPERFAMILY SSF50249 1 65 9.86E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 SMART SM00357 3 67 9.9E-29 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 Gene3D G3DSA:2.40.50.140 1 65 3.6E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.9E-29 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS13750 cf3e4558a295cadf513ff3a390baae0b 67 PIRSF PIRSF002599 1 67 4.0E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PANTHER PTHR10381 15 207 3.1E-135 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 101 112 - T 23-04-2016 IPR018215 ClpP, Ser active site MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 SUPERFAMILY SSF52096 22 204 1.91E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 202 1.2E-104 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 Pfam PF00574 Clp protease 24 203 1.1E-87 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 14 204 44.345 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 Gene3D G3DSA:3.90.226.10 14 202 1.3E-88 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PRINTS PR00127 Clp protease catalytic subunit P signature 101 118 1.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PRINTS PR00127 Clp protease catalytic subunit P signature 70 90 1.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PRINTS PR00127 Clp protease catalytic subunit P signature 30 45 1.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PRINTS PR00127 Clp protease catalytic subunit P signature 179 198 1.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PRINTS PR00127 Clp protease catalytic subunit P signature 122 141 1.2E-52 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 PANTHER PTHR10381:SF22 15 207 3.1E-135 T 23-04-2016 MSIP34_RS07435 c7692197b935c229f9a8292cdce74963 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 123 136 - T 23-04-2016 IPR033135 ClpP, histidine active site MSIP34_RS04495 c9602325a707fa448f37eed8443b738c 190 Gene3D G3DSA:1.10.238.10 55 108 8.9E-8 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS04495 c9602325a707fa448f37eed8443b738c 190 ProSitePatterns PS00018 EF-hand calcium-binding domain. 93 105 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS04495 c9602325a707fa448f37eed8443b738c 190 PANTHER PTHR34606 117 184 5.2E-17 T 23-04-2016 MSIP34_RS04495 c9602325a707fa448f37eed8443b738c 190 Pfam PF04972 BON domain 122 189 4.5E-19 T 23-04-2016 IPR007055 BON domain MSIP34_RS04495 c9602325a707fa448f37eed8443b738c 190 SUPERFAMILY SSF47473 49 114 7.94E-9 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS04495 c9602325a707fa448f37eed8443b738c 190 SMART SM00749 127 190 9.6E-11 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS08885 35c7f41a88db756cd0b9d81383b725fa 135 SUPERFAMILY SSF52172 7 129 5.98E-37 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS08885 35c7f41a88db756cd0b9d81383b725fa 135 PANTHER PTHR26402:SF568 11 124 6.5E-72 T 23-04-2016 MSIP34_RS08885 35c7f41a88db756cd0b9d81383b725fa 135 Gene3D G3DSA:3.40.50.2300 9 131 2.2E-37 T 23-04-2016 MSIP34_RS08885 35c7f41a88db756cd0b9d81383b725fa 135 Pfam PF00072 Response regulator receiver domain 13 124 1.3E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08885 35c7f41a88db756cd0b9d81383b725fa 135 PANTHER PTHR26402 11 124 6.5E-72 T 23-04-2016 MSIP34_RS08885 35c7f41a88db756cd0b9d81383b725fa 135 SMART SM00448 11 124 4.0E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 Pfam PF03550 Outer membrane lipoprotein LolB 46 196 8.2E-48 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 PANTHER PTHR30634 10 198 7.9E-27 T 23-04-2016 MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 5 198 22.612 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 SUPERFAMILY SSF89392 20 198 5.89E-48 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 PANTHER PTHR30634:SF11 10 198 7.9E-27 T 23-04-2016 MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 Gene3D G3DSA:2.50.20.10 14 198 1.2E-56 T 23-04-2016 MSIP34_RS10140 9d88e6512f70c239be958458e353453b 211 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 12 197 8.1E-37 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 MSIP34_RS12375 a8bf7e4865a9e3a03f01ac14c9eb579e 358 SUPERFAMILY SSF103481 83 181 6.15E-6 T 23-04-2016 MSIP34_RS12375 a8bf7e4865a9e3a03f01ac14c9eb579e 358 SUPERFAMILY SSF103481 238 340 1.57E-5 T 23-04-2016 MSIP34_RS12375 a8bf7e4865a9e3a03f01ac14c9eb579e 358 PANTHER PTHR12715 76 358 2.1E-43 T 23-04-2016 MSIP34_RS12375 a8bf7e4865a9e3a03f01ac14c9eb579e 358 PANTHER PTHR12715 20 57 2.1E-43 T 23-04-2016 MSIP34_RS12375 a8bf7e4865a9e3a03f01ac14c9eb579e 358 PANTHER PTHR12715:SF11 76 358 2.1E-43 T 23-04-2016 MSIP34_RS12375 a8bf7e4865a9e3a03f01ac14c9eb579e 358 PANTHER PTHR12715:SF11 20 57 2.1E-43 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 Gene3D G3DSA:3.30.70.1430 44 142 1.3E-23 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82693 43 127 1.8E-18 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 Gene3D G3DSA:1.10.3850.10 803 1018 3.0E-60 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 Gene3D G3DSA:1.10.3850.10 279 498 7.4E-58 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82714 184 265 9.29E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82693 269 325 3.4E-19 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82693 139 182 3.4E-19 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PANTHER PTHR32063:SF24 2 1017 0.0 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82714 713 796 4.84E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1017 0.0 T 23-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 Pfam PF00873 AcrB/AcrD/AcrF family 6 1016 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82866 291 497 1.03E-42 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 Gene3D G3DSA:3.30.2090.10 183 265 3.8E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 Gene3D G3DSA:3.30.2090.10 714 796 9.4E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PRINTS PR00702 Acriflavin resistance protein family signature 612 626 2.9E-39 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 PANTHER PTHR32063 2 1017 0.0 T 23-04-2016 MSIP34_RS11085 5a0b6f0a3abab151672e17ecf458d27e 1021 SUPERFAMILY SSF82866 796 1018 7.98E-56 T 23-04-2016 MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 PANTHER PTHR12001:SF23 1 269 3.2E-92 T 23-04-2016 MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 Gene3D G3DSA:1.10.600.10 4 292 2.5E-86 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 PANTHER PTHR12001 1 269 3.2E-92 T 23-04-2016 IPR017446 Polyprenyl synthetase-related MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 SUPERFAMILY SSF48576 1 287 2.34E-83 T 23-04-2016 IPR008949 Isoprenoid synthase domain MSIP34_RS03035 f4ddb1cd8fb6a10f3fe561b1be5573ea 295 Pfam PF00348 Polyprenyl synthetase 31 266 5.9E-51 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 MSIP34_RS04845 f2dd9533a552d6776aca20ac5db5c798 220 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 15 217 6.5E-105 T 23-04-2016 IPR017791 Urea carboxylase-associated protein 1 MSIP34_RS04845 f2dd9533a552d6776aca20ac5db5c798 220 Pfam PF09347 Domain of unknown function (DUF1989) 20 191 1.8E-67 T 23-04-2016 IPR018959 Domain of unknown function DUF1989 MSIP34_RS04845 f2dd9533a552d6776aca20ac5db5c798 220 PANTHER PTHR31527:SF0 10 219 9.9E-59 T 23-04-2016 MSIP34_RS04845 f2dd9533a552d6776aca20ac5db5c798 220 PANTHER PTHR31527 10 219 9.9E-59 T 23-04-2016 MSIP34_RS00705 8cd393d2676874ef48c4e082accc7376 240 Pfam PF02348 Cytidylyltransferase 8 134 2.8E-27 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 MSIP34_RS00705 8cd393d2676874ef48c4e082accc7376 240 Gene3D G3DSA:3.90.550.10 5 229 2.0E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00705 8cd393d2676874ef48c4e082accc7376 240 PANTHER PTHR21485:SF20 1 225 1.4E-51 T 23-04-2016 MSIP34_RS00705 8cd393d2676874ef48c4e082accc7376 240 PANTHER PTHR21485 1 225 1.4E-51 T 23-04-2016 MSIP34_RS00705 8cd393d2676874ef48c4e082accc7376 240 SUPERFAMILY SSF53448 6 228 1.42E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 Pfam PF12832 MFS_1 like family 6 359 7.6E-80 T 23-04-2016 IPR024989 Major facilitator superfamily associated domain MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 Gene3D G3DSA:1.20.1250.20 6 177 1.8E-15 T 23-04-2016 MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 Gene3D G3DSA:1.20.1250.20 193 380 1.9E-30 T 23-04-2016 MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 PIRSF PIRSF004925 1 381 2.4E-103 T 23-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 PANTHER PTHR23522 1 381 1.1E-82 T 23-04-2016 MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 PANTHER PTHR23522:SF3 1 381 1.1E-82 T 23-04-2016 MSIP34_RS03015 d6ae4b856c776485bee97b87a591625a 381 SUPERFAMILY SSF103473 5 379 5.75E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 PANTHER PTHR32552 122 129 3.7E-166 T 23-04-2016 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 PANTHER PTHR32552 151 792 3.7E-166 T 23-04-2016 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 Pfam PF00593 TonB dependent receptor 559 789 4.5E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 Gene3D G3DSA:2.40.170.20 277 792 6.7E-131 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 SMART SM00965 63 113 8.9E-11 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 PANTHER PTHR32552:SF37 122 129 3.7E-166 T 23-04-2016 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 PANTHER PTHR32552:SF37 151 792 3.7E-166 T 23-04-2016 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 161 792 1.3E-110 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 Pfam PF07715 TonB-dependent Receptor Plug Domain 159 260 1.7E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 775 792 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 Gene3D G3DSA:2.170.130.10 138 267 5.0E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS13805 d78a1c0e68d6067a359cf032acef8a62 792 SUPERFAMILY SSF56935 120 792 4.81E-120 T 23-04-2016 MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 Pfam PF08443 RimK-like ATP-grasp domain 102 289 2.6E-23 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 PANTHER PTHR21621 17 298 4.2E-52 T 23-04-2016 MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 PANTHER PTHR21621:SF0 17 298 4.2E-52 T 23-04-2016 MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 Gene3D G3DSA:3.30.470.20 176 278 2.0E-18 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 SUPERFAMILY SSF56059 104 292 2.83E-39 T 23-04-2016 MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 7 289 7.3E-50 T 23-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 MSIP34_RS07645 1c566dfb67b02fc158bcb821917d716a 306 Gene3D G3DSA:3.40.50.20 5 116 1.9E-21 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS04820 cd2a341243e203424c433e50b3d646bc 304 SMART SM00382 59 238 7.3E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS04820 cd2a341243e203424c433e50b3d646bc 304 PANTHER PTHR24220 32 304 1.1E-95 T 23-04-2016 MSIP34_RS04820 cd2a341243e203424c433e50b3d646bc 304 Pfam PF00005 ABC transporter 50 189 8.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS04820 cd2a341243e203424c433e50b3d646bc 304 SUPERFAMILY SSF52540 30 256 1.96E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04820 cd2a341243e203424c433e50b3d646bc 304 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS04820 cd2a341243e203424c433e50b3d646bc 304 Gene3D G3DSA:3.40.50.300 24 245 8.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 Gene3D G3DSA:1.10.579.10 312 447 1.9E-51 T 23-04-2016 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 SUPERFAMILY SSF52425 11 185 3.53E-37 T 23-04-2016 IPR006050 DNA photolyase, N-terminal MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 PRINTS PR00147 DNA photolyase signature 350 366 6.8E-12 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 PRINTS PR00147 DNA photolyase signature 409 423 6.8E-12 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 PRINTS PR00147 DNA photolyase signature 370 388 6.8E-12 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 Gene3D G3DSA:3.40.50.620 10 157 3.6E-32 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 Pfam PF00875 DNA photolyase 11 176 2.4E-31 T 23-04-2016 IPR006050 DNA photolyase, N-terminal MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 Pfam PF03441 FAD binding domain of DNA photolyase 304 446 6.8E-42 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 11 448 8.9E-130 T 23-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 PANTHER PTHR11455:SF22 11 446 5.3E-140 T 23-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 SUPERFAMILY SSF48173 227 446 1.83E-67 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 PANTHER PTHR11455 11 446 5.3E-140 T 23-04-2016 MSIP34_RS05200 bcca3197d8c97a4a9f2f2a8fc73898cd 450 Gene3D G3DSA:1.25.40.80 158 311 4.0E-44 T 23-04-2016 MSIP34_RS07605 c1aeb53b622e90543a4c45aed7436f77 329 Pfam PF02655 ATP-grasp domain 120 288 1.9E-30 T 23-04-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 MSIP34_RS07605 c1aeb53b622e90543a4c45aed7436f77 329 PANTHER PTHR21621 101 306 6.0E-12 T 23-04-2016 MSIP34_RS07605 c1aeb53b622e90543a4c45aed7436f77 329 PIRSF PIRSF016766 1 311 2.1E-69 T 23-04-2016 IPR024710 Tyramine--L-glutamate ligase KEGG: 00680+6.3.4.24|MetaCyc: PWY-5254|UniPathway: UPA00080 MSIP34_RS07605 c1aeb53b622e90543a4c45aed7436f77 329 Gene3D G3DSA:3.30.470.20 116 320 3.6E-7 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS07605 c1aeb53b622e90543a4c45aed7436f77 329 SUPERFAMILY SSF56059 117 317 8.37E-17 T 23-04-2016 MSIP34_RS09130 4c27cc173930f0c68fbac2ed26eac845 383 SMART SM00558 99 234 8.7E-5 T 23-04-2016 IPR003347 JmjC domain MSIP34_RS09130 4c27cc173930f0c68fbac2ed26eac845 383 SUPERFAMILY SSF51197 15 301 6.04E-80 T 23-04-2016 MSIP34_RS09130 4c27cc173930f0c68fbac2ed26eac845 383 Gene3D G3DSA:2.60.120.650 17 220 2.9E-41 T 23-04-2016 MSIP34_RS09130 4c27cc173930f0c68fbac2ed26eac845 383 PANTHER PTHR13096 17 275 2.6E-49 T 23-04-2016 MSIP34_RS09130 4c27cc173930f0c68fbac2ed26eac845 383 Pfam PF08007 Cupin superfamily protein 24 320 9.5E-92 T 23-04-2016 IPR003347 JmjC domain MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 SUPERFAMILY SSF69065 6 144 2.79E-45 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 SMART SM00358 153 221 1.5E-18 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 SUPERFAMILY SSF54768 106 220 4.56E-26 T 23-04-2016 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 PANTHER PTHR11207 6 220 1.1E-76 T 23-04-2016 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 Pfam PF00035 Double-stranded RNA binding motif 153 220 6.2E-14 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 SMART SM00535 18 146 7.9E-50 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 Gene3D G3DSA:1.10.1520.10 5 145 1.8E-44 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 Gene3D G3DSA:3.30.160.20 150 220 8.5E-25 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 Pfam PF14622 Ribonuclease-III-like 18 135 2.1E-33 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 220 1.1E-68 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 MSIP34_RS09005 17f9d096271e8971063e8332ee6a837c 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.133 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 MSIP34_RS06705 4adf66abb977eef099e85aff4e30865e 151 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 143 1.7E-48 T 23-04-2016 IPR011971 Conserved hypothetical protein CHP02284 MSIP34_RS06705 4adf66abb977eef099e85aff4e30865e 151 PIRSF PIRSF029477 1 149 8.7E-59 T 23-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 MSIP34_RS06705 4adf66abb977eef099e85aff4e30865e 151 Pfam PF09537 Domain of unknown function (DUF2383) 6 115 3.2E-38 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 MSIP34_RS06705 4adf66abb977eef099e85aff4e30865e 151 Gene3D G3DSA:1.20.1260.10 1 142 3.9E-10 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS06705 4adf66abb977eef099e85aff4e30865e 151 SUPERFAMILY SSF47240 1 128 7.31E-6 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS10860 3af422cdfc90d52314268118b1dba0b1 428 PANTHER PTHR35093:SF2 14 428 6.1E-36 T 23-04-2016 MSIP34_RS10860 3af422cdfc90d52314268118b1dba0b1 428 Gene3D G3DSA:2.40.160.60 34 426 4.2E-93 T 23-04-2016 MSIP34_RS10860 3af422cdfc90d52314268118b1dba0b1 428 PANTHER PTHR35093 14 428 6.1E-36 T 23-04-2016 MSIP34_RS10860 3af422cdfc90d52314268118b1dba0b1 428 SUPERFAMILY SSF56935 35 426 1.32E-54 T 23-04-2016 MSIP34_RS10860 3af422cdfc90d52314268118b1dba0b1 428 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 50 397 9.0E-37 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) MSIP34_RS00775 1459ab3425a293dc6dcf6ca70988d0a4 269 PANTHER PTHR30535 4 255 1.1E-45 T 23-04-2016 MSIP34_RS00775 1459ab3425a293dc6dcf6ca70988d0a4 269 Pfam PF01497 Periplasmic binding protein 5 230 6.3E-41 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 MSIP34_RS00775 1459ab3425a293dc6dcf6ca70988d0a4 269 Gene3D G3DSA:3.40.50.1980 123 255 8.9E-18 T 23-04-2016 MSIP34_RS00775 1459ab3425a293dc6dcf6ca70988d0a4 269 SUPERFAMILY SSF53807 4 255 8.24E-48 T 23-04-2016 MSIP34_RS00775 1459ab3425a293dc6dcf6ca70988d0a4 269 Gene3D G3DSA:3.40.50.1980 2 120 2.8E-23 T 23-04-2016 MSIP34_RS13085 a395d7796a3005ccb9d8dc237dbee780 183 PANTHER PTHR35039:SF1 23 175 3.5E-18 T 23-04-2016 MSIP34_RS13085 a395d7796a3005ccb9d8dc237dbee780 183 Gene3D G3DSA:3.30.230.60 2 177 8.0E-64 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS13085 a395d7796a3005ccb9d8dc237dbee780 183 SUPERFAMILY SSF54211 2 176 9.1E-57 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS13085 a395d7796a3005ccb9d8dc237dbee780 183 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 7 174 7.7E-43 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS13085 a395d7796a3005ccb9d8dc237dbee780 183 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 9 175 1.2E-61 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS13085 a395d7796a3005ccb9d8dc237dbee780 183 PANTHER PTHR35039 23 175 3.5E-18 T 23-04-2016 MSIP34_RS03005 30ffd2f9aff6c878cdb7dc1ea1ddfa86 235 Gene3D G3DSA:3.40.50.880 1 229 6.5E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS03005 30ffd2f9aff6c878cdb7dc1ea1ddfa86 235 SUPERFAMILY SSF52317 4 194 1.48E-37 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS03005 30ffd2f9aff6c878cdb7dc1ea1ddfa86 235 PANTHER PTHR11922 27 184 1.7E-45 T 23-04-2016 MSIP34_RS03005 30ffd2f9aff6c878cdb7dc1ea1ddfa86 235 Pfam PF00117 Glutamine amidotransferase class-I 43 177 1.2E-11 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS03005 30ffd2f9aff6c878cdb7dc1ea1ddfa86 235 PANTHER PTHR11922:SF11 27 184 1.7E-45 T 23-04-2016 MSIP34_RS09300 0d0b70ecb8e46d9423a77bc913a60757 415 Pfam PF10082 Putative beta-barrel porin 2 190 411 8.6E-14 T 23-04-2016 IPR018759 Putative beta-barrel porin 2 MSIP34_RS09300 0d0b70ecb8e46d9423a77bc913a60757 415 TIGRFAM TIGR03014 EpsL: exopolysaccharide biosynthesis operon protein EpsL 30 415 2.3E-137 T 23-04-2016 IPR017465 Exopolysaccharide biosynthesis operon, EpsL, proteobacteria MSIP34_RS12305 cc4443b2a8ad8d865999ee74535627dc 250 Gene3D G3DSA:3.60.10.10 5 248 3.1E-17 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS12305 cc4443b2a8ad8d865999ee74535627dc 250 PANTHER PTHR15822 5 220 7.2E-57 T 23-04-2016 MSIP34_RS12305 cc4443b2a8ad8d865999ee74535627dc 250 PANTHER PTHR15822:SF7 5 220 7.2E-57 T 23-04-2016 MSIP34_RS12305 cc4443b2a8ad8d865999ee74535627dc 250 SUPERFAMILY SSF56219 4 247 5.89E-45 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS12305 cc4443b2a8ad8d865999ee74535627dc 250 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 240 5.1E-17 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 SUPERFAMILY SSF88688 313 392 5.49E-33 T 23-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 Gene3D G3DSA:3.20.110.10 4 62 6.2E-4 T 23-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 Gene3D G3DSA:3.20.110.10 68 280 2.1E-17 T 23-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 ProDom PD014405 HYDROLASE METABOLISM CARBOHYDRATE GLYCOSIDASE ALPHA-AMYLASE TRANSFERASE 4-ALPHA-GLUCANOTRANSFERASE GLYCOSYLTRANSFERASE FAMILY DIRECT 321 392 3.0E-26 T 23-04-2016 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 Pfam PF03065 Glycosyl hydrolase family 57 10 293 1.5E-40 T 23-04-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 SUPERFAMILY SSF88713 6 281 1.18E-55 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 SUPERFAMILY SSF74650 399 657 2.82E-65 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 Pfam PF09095 Domain of unknown function (DUF1926) 405 655 1.9E-58 T 23-04-2016 IPR015179 Alpha-amylase/4-alpha-glucanotransferase, C-terminal GO:0003824|GO:0005975|GO:0030246 MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 Gene3D G3DSA:2.70.98.10 403 658 5.9E-65 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 MSIP34_RS06490 fe71a8ed22cd6e18664f54b7bf9d6b96 668 Pfam PF09094 Domain of unknown function (DUF1925) 313 391 2.5E-38 T 23-04-2016 IPR015178 Alpha-amylase/4-alpha-glucanotransferase, central domain MSIP34_RS09060 90fcaa6f31fcd452d57574cb312f2222 300 Pfam PF05114 Protein of unknown function (DUF692) 12 278 4.1E-103 T 23-04-2016 IPR007801 Uncharacterised protein family UPF0276 MSIP34_RS09060 90fcaa6f31fcd452d57574cb312f2222 300 PANTHER PTHR42194 7 285 9.4E-109 T 23-04-2016 MSIP34_RS09060 90fcaa6f31fcd452d57574cb312f2222 300 Gene3D G3DSA:3.20.20.150 10 283 7.1E-101 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain MSIP34_RS09060 90fcaa6f31fcd452d57574cb312f2222 300 SUPERFAMILY SSF51658 37 241 1.18E-11 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain MSIP34_RS09060 90fcaa6f31fcd452d57574cb312f2222 300 PANTHER PTHR42194:SF1 7 285 9.4E-109 T 23-04-2016 MSIP34_RS09060 90fcaa6f31fcd452d57574cb312f2222 300 Hamap MF_00697 UPF0276 protein . 13 286 44.93 T 23-04-2016 IPR007801 Uncharacterised protein family UPF0276 MSIP34_RS04090 57d3b9d5c87803550a75146a1f873ee8 331 Pfam PF04773 FecR protein 123 215 4.0E-15 T 23-04-2016 IPR006860 FecR protein MSIP34_RS04090 57d3b9d5c87803550a75146a1f873ee8 331 PIRSF PIRSF018266 3 330 9.1E-69 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS04090 57d3b9d5c87803550a75146a1f873ee8 331 PANTHER PTHR30273:SF3 5 318 1.1E-54 T 23-04-2016 MSIP34_RS04090 57d3b9d5c87803550a75146a1f873ee8 331 PANTHER PTHR30273 5 318 1.1E-54 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS04090 57d3b9d5c87803550a75146a1f873ee8 331 Pfam PF16220 Domain of unknown function (DUF4880) 17 55 7.2E-13 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 293 2.6E-78 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 Gene3D G3DSA:3.20.20.300 5 294 8.7E-94 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 PANTHER PTHR30480 6 309 1.9E-114 T 23-04-2016 MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 SUPERFAMILY SSF51445 4 298 1.47E-86 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 PANTHER PTHR30480:SF7 6 309 1.9E-114 T 23-04-2016 MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 5 341 53.034 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 MSIP34_RS04940 b05edb958e875441f6904321a13ce0f8 351 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 238 255 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 SUPERFAMILY SSF52467 198 318 3.6E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 Pfam PF01012 Electron transfer flavoprotein domain 5 169 3.6E-26 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 PANTHER PTHR10909:SF309 109 311 2.4E-37 T 23-04-2016 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 263 289 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 PANTHER PTHR10909 109 311 2.4E-37 T 23-04-2016 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 SUPERFAMILY SSF52402 3 183 1.67E-35 T 23-04-2016 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 199 281 2.8E-30 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 SMART SM00893 4 189 1.3E-15 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 Gene3D G3DSA:3.40.50.620 3 170 4.2E-36 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 PIRSF PIRSF000089 1 320 2.7E-87 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 MSIP34_RS12345 d3e626e856fc06186ccc9d065e05c754 320 Gene3D G3DSA:3.40.50.1220 197 319 2.2E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS08470 a4d1aed8156416026b445d87075e89ca 82 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 16 61 3.3E-8 T 23-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 29 130 1.5E-9 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 Gene3D G3DSA:3.40.50.300 286 555 2.4E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 PANTHER PTHR30258:SF2 3 555 1.2E-160 T 23-04-2016 MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 375 389 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 SUPERFAMILY SSF52540 164 555 3.43E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 Pfam PF00437 Type II/IV secretion system protein 180 446 2.4E-70 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 SUPERFAMILY SSF160246 2 127 7.06E-18 T 23-04-2016 MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 PANTHER PTHR30258 3 555 1.2E-160 T 23-04-2016 MSIP34_RS05245 f1dfab46619687a570de442b681f9a67 559 Gene3D G3DSA:3.30.450.90 155 275 7.3E-44 T 23-04-2016 MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 Gene3D G3DSA:3.40.50.300 122 293 9.1E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 SUPERFAMILY SSF160246 18 92 9.15E-16 T 23-04-2016 MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 124 293 2.2E-9 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 TIGRFAM TIGR03029 EpsG: chain length determinant protein tyrosine kinase EpsG 20 292 7.1E-139 T 23-04-2016 IPR017479 Tyrosine-protein kinase, chain length determinant protein EpsG MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 PANTHER PTHR32309:SF14 88 293 4.8E-37 T 23-04-2016 MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 SUPERFAMILY SSF52540 122 293 4.96E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 PANTHER PTHR32309 88 293 4.8E-37 T 23-04-2016 MSIP34_RS09280 723a2b1e6db303ed123ef217798d5126 293 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 103 292 1.8E-44 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 MSIP34_RS09160 66e9e03159fd89f3d586a25148858090 298 Gene3D G3DSA:3.90.550.10 9 215 2.7E-42 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09160 66e9e03159fd89f3d586a25148858090 298 Pfam PF00535 Glycosyl transferase family 2 11 120 5.6E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS09160 66e9e03159fd89f3d586a25148858090 298 SUPERFAMILY SSF53448 9 221 3.66E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09160 66e9e03159fd89f3d586a25148858090 298 PANTHER PTHR22916 1 211 1.6E-44 T 23-04-2016 MSIP34_RS10340 27b0c4fcb79fa68671c0cbf541043b1a 1188 Gene3D G3DSA:3.40.50.300 626 809 1.3E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10340 27b0c4fcb79fa68671c0cbf541043b1a 1188 Pfam PF13604 AAA domain 647 816 2.4E-34 T 23-04-2016 MSIP34_RS10340 27b0c4fcb79fa68671c0cbf541043b1a 1188 SUPERFAMILY SSF52540 642 789 1.58E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10340 27b0c4fcb79fa68671c0cbf541043b1a 1188 SUPERFAMILY SSF55464 151 274 5.95E-7 T 23-04-2016 MSIP34_RS10340 27b0c4fcb79fa68671c0cbf541043b1a 1188 SUPERFAMILY SSF52540 752 820 1.16E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10340 27b0c4fcb79fa68671c0cbf541043b1a 1188 SUPERFAMILY SSF52540 875 1022 1.16E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03855 de08b3d4c05d1312080bcf2a3b7748a8 101 SUPERFAMILY SSF160544 11 89 2.22E-23 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal MSIP34_RS03855 de08b3d4c05d1312080bcf2a3b7748a8 101 Pfam PF01312 FlhB HrpN YscU SpaS Family 11 85 6.3E-18 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS03855 de08b3d4c05d1312080bcf2a3b7748a8 101 Gene3D G3DSA:3.40.1690.10 11 90 3.3E-24 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal MSIP34_RS03855 de08b3d4c05d1312080bcf2a3b7748a8 101 PANTHER PTHR30531 11 99 5.8E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS08700 f4ac0181b6ce5957f7f4efc46eafe65f 336 Gene3D G3DSA:1.10.260.40 25 109 1.1E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS08700 f4ac0181b6ce5957f7f4efc46eafe65f 336 SUPERFAMILY SSF47413 23 90 3.64E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS08700 f4ac0181b6ce5957f7f4efc46eafe65f 336 PANTHER PTHR34475:SF1 12 335 4.7E-44 T 23-04-2016 MSIP34_RS08700 f4ac0181b6ce5957f7f4efc46eafe65f 336 Pfam PF13413 Helix-turn-helix domain 29 88 7.8E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS08700 f4ac0181b6ce5957f7f4efc46eafe65f 336 Pfam PF13464 Domain of unknown function (DUF4115) 262 335 3.0E-22 T 23-04-2016 IPR025194 Domain of unknown function DUF4115 MSIP34_RS08700 f4ac0181b6ce5957f7f4efc46eafe65f 336 PANTHER PTHR34475 12 335 4.7E-44 T 23-04-2016 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 174 1.1E-63 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 SUPERFAMILY SSF54211 1 86 2.4E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 SUPERFAMILY SSF54211 87 179 2.43E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 Gene3D G3DSA:3.30.230.40 90 195 6.4E-31 T 23-04-2016 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 PANTHER PTHR23133:SF2 1 195 1.8E-103 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 Gene3D G3DSA:3.30.230.40 1 89 5.5E-38 T 23-04-2016 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.755 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 MSIP34_RS01400 7d4a6073697f6ef096f71de5e451367e 195 PANTHER PTHR23133 1 195 1.8E-103 T 23-04-2016 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 7 439 40.679 T 23-04-2016 IPR023512 Deaminase MtaD/DadD GO:0019239 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 SUPERFAMILY SSF51338 14 66 8.65E-22 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 SUPERFAMILY SSF51338 364 437 8.65E-22 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 PANTHER PTHR11271:SF7 5 440 1.3E-179 T 23-04-2016 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 Gene3D G3DSA:2.30.40.10 373 416 1.1E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 Gene3D G3DSA:2.30.40.10 20 68 1.1E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 PANTHER PTHR11271 5 440 1.3E-179 T 23-04-2016 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 Pfam PF01979 Amidohydrolase family 64 412 1.1E-75 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 Gene3D G3DSA:3.20.20.140 69 372 8.1E-107 T 23-04-2016 MSIP34_RS08515 cd72123f2c6780c9c1183c8efc0b717d 443 SUPERFAMILY SSF51556 66 365 4.68E-104 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS10405 88f2c706808cc7914d525f28fc70adc0 239 SUPERFAMILY SSF74653 142 222 1.45E-5 T 23-04-2016 MSIP34_RS10405 88f2c706808cc7914d525f28fc70adc0 239 Gene3D G3DSA:3.30.1150.10 152 223 3.7E-6 T 23-04-2016 MSIP34_RS10405 88f2c706808cc7914d525f28fc70adc0 239 Pfam PF13103 TonB C terminal 153 222 2.7E-7 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 PANTHER PTHR38439 13 149 1.8E-43 T 23-04-2016 MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 Gene3D G3DSA:2.60.40.420 22 147 3.5E-53 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 SUPERFAMILY SSF49503 22 146 7.15E-42 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 PANTHER PTHR38439:SF2 13 149 1.8E-43 T 23-04-2016 MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 125 141 - T 23-04-2016 IPR028871 Blue (type 1) copper protein, binding site MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 TIGRFAM TIGR02695 azurin: azurin 23 147 1.0E-60 T 23-04-2016 IPR014068 Azurin, proteobacteria MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 147 6.2E-29 T 23-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 MSIP34_RS01185 36fb43977f28de2a1102c68a174699ca 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 145 3.0E-45 T 23-04-2016 MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 SMART SM00100 11 132 9.4E-15 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 Pfam PF00027 Cyclic nucleotide-binding domain 31 114 1.5E-19 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 Pfam PF13545 Crp-like helix-turn-helix domain 154 215 1.6E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 Gene3D G3DSA:2.60.120.10 6 135 1.4E-29 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 PANTHER PTHR24567 3 222 1.2E-35 T 23-04-2016 MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 Gene3D G3DSA:1.10.10.10 149 218 7.0E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 SUPERFAMILY SSF46785 147 219 6.69E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 SUPERFAMILY SSF51206 7 139 5.89E-29 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS06390 e78802fefaaa0aeb51ebd11e2160f08f 227 SMART SM00419 161 209 5.6E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 PANTHER PTHR24421 403 606 9.1E-58 T 23-04-2016 MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 Gene3D G3DSA:3.30.450.40 245 391 7.3E-7 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 Pfam PF07730 Histidine kinase 408 471 2.7E-15 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 PIRSF PIRSF003167 9 608 5.5E-100 T 23-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 SUPERFAMILY SSF55781 244 390 8.63E-5 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 Gene3D G3DSA:3.30.565.10 510 602 4.4E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 SUPERFAMILY SSF55874 510 604 7.89E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 PANTHER PTHR24421:SF12 403 606 9.1E-58 T 23-04-2016 MSIP34_RS12390 15155ebb6b259c251a1bf96eea3c4237 608 SMART SM00387 512 606 6.4E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS08085 1ce25e499e1280fc1e5a0a55db46143e 193 SUPERFAMILY SSF48613 2 181 4.13E-22 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS08085 1ce25e499e1280fc1e5a0a55db46143e 193 Gene3D G3DSA:1.20.910.10 1 183 5.1E-39 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 MSIP34_RS08085 1ce25e499e1280fc1e5a0a55db46143e 193 Pfam PF01126 Heme oxygenase 2 177 3.7E-4 T 23-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 MSIP34_RS10080 b1b213be35244e33adcb6ed087d25eb7 128 Pfam PF06155 Protein of unknown function (DUF971) 14 98 2.0E-30 T 23-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 MSIP34_RS10080 b1b213be35244e33adcb6ed087d25eb7 128 PANTHER PTHR35303:SF1 1 122 4.5E-50 T 23-04-2016 MSIP34_RS10080 b1b213be35244e33adcb6ed087d25eb7 128 PANTHER PTHR35303 1 122 4.5E-50 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 Gene3D G3DSA:3.30.450.20 221 291 7.6E-8 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 37 153 1.6E-17 T 23-04-2016 IPR029095 NarX-like, N-terminal MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 PANTHER PTHR10799 8 65 2.1E-42 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 PANTHER PTHR10799 362 488 2.1E-42 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 Pfam PF13188 PAS domain 226 278 2.3E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 SUPERFAMILY SSF55073 334 491 3.92E-48 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 484 1.3E-49 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 486 1.6E-43 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 Gene3D G3DSA:3.30.70.270 330 492 2.4E-54 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 PANTHER PTHR10799:SF774 8 65 2.1E-42 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 PANTHER PTHR10799:SF774 362 488 2.1E-42 T 23-04-2016 MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 SMART SM00267 318 490 5.8E-64 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07580 52ad24fc3c6d24126f812b7a391f2234 498 SUPERFAMILY SSF55785 217 284 1.52E-6 T 23-04-2016 IPR000014 PAS domain MSIP34_RS00140 fd456aa5bdff5706243661e037dab55f 117 PANTHER PTHR23419 7 115 2.6E-35 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 MSIP34_RS00140 fd456aa5bdff5706243661e037dab55f 117 Gene3D G3DSA:3.30.70.830 3 116 4.9E-41 T 23-04-2016 MSIP34_RS00140 fd456aa5bdff5706243661e037dab55f 117 Pfam PF03091 CutA1 divalent ion tolerance protein 16 114 8.5E-35 T 23-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 MSIP34_RS00140 fd456aa5bdff5706243661e037dab55f 117 SUPERFAMILY SSF54913 13 115 1.45E-36 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta MSIP34_RS01995 6c57d4b65226c8801fe82eeb895c3225 242 SUPERFAMILY SSF102405 23 221 7.46E-62 T 23-04-2016 MSIP34_RS01995 6c57d4b65226c8801fe82eeb895c3225 242 Gene3D G3DSA:3.40.50.450 27 228 6.5E-65 T 23-04-2016 MSIP34_RS01995 6c57d4b65226c8801fe82eeb895c3225 242 PANTHER PTHR31223:SF1 18 238 1.6E-89 T 23-04-2016 MSIP34_RS01995 6c57d4b65226c8801fe82eeb895c3225 242 PANTHER PTHR31223 18 238 1.6E-89 T 23-04-2016 MSIP34_RS01995 6c57d4b65226c8801fe82eeb895c3225 242 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 48 220 6.0E-48 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG MSIP34_RS01995 6c57d4b65226c8801fe82eeb895c3225 242 Pfam PF03641 Possible lysine decarboxylase 90 220 3.9E-35 T 23-04-2016 IPR031100 LOG family MSIP34_RS06585 1af72c9b9d49e1c7c999706fe497b7b9 292 SUPERFAMILY SSF103481 196 288 4.97E-9 T 23-04-2016 MSIP34_RS06585 1af72c9b9d49e1c7c999706fe497b7b9 292 Pfam PF00892 EamA-like transporter family 15 140 1.5E-8 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS06585 1af72c9b9d49e1c7c999706fe497b7b9 292 Pfam PF00892 EamA-like transporter family 155 284 2.5E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS06585 1af72c9b9d49e1c7c999706fe497b7b9 292 SUPERFAMILY SSF103481 52 143 5.1E-9 T 23-04-2016 MSIP34_RS06585 1af72c9b9d49e1c7c999706fe497b7b9 292 PANTHER PTHR22911 3 291 4.2E-28 T 23-04-2016 MSIP34_RS06585 1af72c9b9d49e1c7c999706fe497b7b9 292 PANTHER PTHR22911:SF23 3 291 4.2E-28 T 23-04-2016 MSIP34_RS03970 ea79de6d018d5d637b4eb67b0c371e0e 218 Pfam PF03963 Flagellar hook capping protein - N-terminal region 5 74 2.5E-23 T 23-04-2016 IPR005648 Flagellar hook capping protein MSIP34_RS03970 ea79de6d018d5d637b4eb67b0c371e0e 218 Pfam PF13860 FlgD Ig-like domain 100 175 1.9E-23 T 23-04-2016 IPR025965 FlgD Ig-like domain MSIP34_RS03970 ea79de6d018d5d637b4eb67b0c371e0e 218 PANTHER PTHR30435:SF15 1 203 2.6E-44 T 23-04-2016 MSIP34_RS03970 ea79de6d018d5d637b4eb67b0c371e0e 218 PANTHER PTHR30435 1 203 2.6E-44 T 23-04-2016 MSIP34_RS03970 ea79de6d018d5d637b4eb67b0c371e0e 218 Pfam PF13861 FlgD Tudor-like domain 82 214 3.8E-15 T 23-04-2016 IPR025963 FlgD Tudor-like domain MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 302 1.6E-133 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 SUPERFAMILY SSF56112 5 305 1.53E-81 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 PANTHER PTHR21064 16 280 2.0E-45 T 23-04-2016 MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 Gene3D G3DSA:3.90.1200.10 106 308 2.6E-63 T 23-04-2016 MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 Pfam PF01636 Phosphotransferase enzyme family 27 253 5.0E-38 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 141.849 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 MSIP34_RS02005 25fcf6e9793ae0b31996b6c395805224 316 Gene3D G3DSA:3.30.200.20 1 103 2.3E-41 T 23-04-2016 MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.0E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PANTHER PTHR24322 9 137 1.9E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PANTHER PTHR24322 153 185 1.9E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 Gene3D G3DSA:3.40.50.720 2 245 2.3E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 188 4.7E-6 T 23-04-2016 MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.6E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 8.3E-68 T 23-04-2016 MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 SUPERFAMILY SSF51735 3 245 8.32E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PANTHER PTHR24322:SF635 9 137 1.9E-65 T 23-04-2016 MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 PANTHER PTHR24322:SF635 153 185 1.9E-65 T 23-04-2016 MSIP34_RS07050 9b83bd6fd2daaf6d0341692ab3c863c4 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 244 2.3E-102 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 Gene3D G3DSA:3.40.50.880 244 424 9.6E-23 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 11 182 7.0E-15 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 Gene3D G3DSA:3.40.50.300 6 192 5.2E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 12 426 6.8E-81 T 23-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 244 419 1.1E-28 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 SUPERFAMILY SSF52317 242 426 9.91E-32 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 SUPERFAMILY SSF52540 8 194 3.99E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 PANTHER PTHR21343:SF6 3 429 3.2E-127 T 23-04-2016 MSIP34_RS00805 f54292025b1d4dfcf8c506b9f7a0c060 429 PANTHER PTHR21343 3 429 3.2E-127 T 23-04-2016 MSIP34_RS00765 80d61eaf234baf8190497e2cbdc21b6b 72 PANTHER PTHR32319 4 71 3.0E-19 T 23-04-2016 MSIP34_RS00765 80d61eaf234baf8190497e2cbdc21b6b 72 Pfam PF13275 S4 domain 3 66 5.8E-25 T 23-04-2016 MSIP34_RS00765 80d61eaf234baf8190497e2cbdc21b6b 72 Gene3D G3DSA:3.10.290.10 1 67 9.5E-27 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS00765 80d61eaf234baf8190497e2cbdc21b6b 72 PANTHER PTHR32319:SF3 4 71 3.0E-19 T 23-04-2016 MSIP34_RS00765 80d61eaf234baf8190497e2cbdc21b6b 72 SUPERFAMILY SSF55174 2 66 3.4E-19 T 23-04-2016 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 PANTHER PTHR21600:SF2 28 338 1.9E-81 T 23-04-2016 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 PANTHER PTHR21600 28 338 1.9E-81 T 23-04-2016 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 Gene3D G3DSA:3.10.290.10 28 83 1.5E-16 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 Pfam PF01479 S4 domain 29 74 4.0E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 96 256 7.3E-51 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 SUPERFAMILY SSF55174 28 118 6.18E-16 T 23-04-2016 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 SUPERFAMILY SSF55120 92 260 6.48E-39 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 130 144 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 SMART SM00363 29 91 7.5E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 MSIP34_RS04715 d3f0f6ca020f36df50117f1ee9130f25 362 Pfam PF00849 RNA pseudouridylate synthase 92 223 1.0E-15 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 PIRSF PIRSF006809 2 444 1.7E-144 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 Pfam PF16360 GTP-binding GTPase Middle Region 133 213 3.1E-19 T 23-04-2016 IPR032305 GTP-binding protein, middle domain MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 12 383 1.8E-112 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 242 3.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 243 261 3.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 286 3.5E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 PANTHER PTHR10229 26 382 5.3E-122 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 Hamap MF_00900 GTPase HflX [hflX]. 31 415 44.337 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 SUPERFAMILY SSF52540 221 397 7.71E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 Pfam PF13167 GTP-binding GTPase N-terminal 28 129 5.0E-29 T 23-04-2016 IPR025121 GTPase HflX, N-terminal MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 Pfam PF01926 50S ribosome-binding GTPase 222 340 1.8E-19 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 PANTHER PTHR10229:SF0 26 382 5.3E-122 T 23-04-2016 MSIP34_RS00020 e8d90525bdd20e602e0ec4cafca6fb3f 444 Gene3D G3DSA:3.40.50.300 221 387 3.9E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03250 423f00eef1769fc5a11d48cfb9731a9f 59 Pfam PF03966 Trm112p-like protein 2 41 2.8E-13 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 MSIP34_RS03250 423f00eef1769fc5a11d48cfb9731a9f 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 28.785 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 MSIP34_RS03250 423f00eef1769fc5a11d48cfb9731a9f 59 Gene3D G3DSA:2.20.25.10 8 57 3.8E-28 T 23-04-2016 MSIP34_RS03250 423f00eef1769fc5a11d48cfb9731a9f 59 SUPERFAMILY SSF158997 1 55 5.49E-23 T 23-04-2016 MSIP34_RS03250 423f00eef1769fc5a11d48cfb9731a9f 59 PANTHER PTHR33505 1 58 1.6E-27 T 23-04-2016 MSIP34_RS00695 fc2bf5a02ac13de9b5f0f2467ca3082c 291 Pfam PF13489 Methyltransferase domain 76 231 3.7E-21 T 23-04-2016 MSIP34_RS00695 fc2bf5a02ac13de9b5f0f2467ca3082c 291 PANTHER PTHR10108 92 283 2.7E-20 T 23-04-2016 MSIP34_RS00695 fc2bf5a02ac13de9b5f0f2467ca3082c 291 SUPERFAMILY SSF53335 84 253 4.15E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00695 fc2bf5a02ac13de9b5f0f2467ca3082c 291 Gene3D G3DSA:3.40.50.150 89 264 7.5E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00695 fc2bf5a02ac13de9b5f0f2467ca3082c 291 PANTHER PTHR10108:SF730 92 283 2.7E-20 T 23-04-2016 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 SMART SM00304 391 443 2.3 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 SMART SM00304 210 262 3.9E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 Gene3D G3DSA:1.10.287.950 453 649 1.6E-44 T 23-04-2016 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 PANTHER PTHR32089 61 244 4.6E-103 T 23-04-2016 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 PANTHER PTHR32089 426 680 4.6E-103 T 23-04-2016 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 SUPERFAMILY SSF158472 214 260 8.24E-8 T 23-04-2016 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 SUPERFAMILY SSF58104 411 678 1.48E-63 T 23-04-2016 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 175 1.9E-20 T 23-04-2016 IPR024478 4HB MCP domain MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 524 675 3.7E-41 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 SMART SM00283 444 677 8.9E-74 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 Pfam PF00672 HAMP domain 193 258 2.4E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 218 6.8E-30 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 564 593 6.8E-30 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 6.8E-30 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13580 3ec4cda1832a33dcd9f397cc5cf10a76 723 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 535 562 6.8E-30 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 Gene3D G3DSA:1.20.1050.40 20 147 4.8E-30 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 PANTHER PTHR11804:SF8 7 684 1.1E-297 T 23-04-2016 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 Gene3D G3DSA:3.40.390.10 366 509 1.1E-53 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 Gene3D G3DSA:1.10.1370.10 510 683 4.9E-143 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 Gene3D G3DSA:1.10.1370.10 150 356 4.9E-143 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 PANTHER PTHR11804 7 684 1.1E-297 T 23-04-2016 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 SUPERFAMILY SSF55486 11 682 1.47E-194 T 23-04-2016 MSIP34_RS01025 f6d9f7e8f5cd3c66a99f6d8dcf4715bb 685 Pfam PF01432 Peptidase family M3 231 682 2.3E-146 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 Gene3D G3DSA:3.20.20.450 524 775 1.3E-95 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 Pfam PF00672 HAMP domain 274 340 1.2E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 Pfam PF14827 Double sensory domain of two-component sensor kinase 39 243 1.7E-15 T 23-04-2016 IPR029150 Double Cache domain 3 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 SMART SM00304 293 345 5.2E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 349 508 4.2E-37 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 Gene3D G3DSA:3.30.70.270 353 512 2.0E-49 T 23-04-2016 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 SUPERFAMILY SSF141868 527 776 6.02E-89 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 SMART SM00052 521 766 1.2E-107 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 505 9.2E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 SMART SM00267 340 511 4.7E-55 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 Pfam PF00563 EAL domain 527 761 2.6E-71 T 23-04-2016 IPR001633 EAL domain MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 PANTHER PTHR33121 147 154 8.0E-72 T 23-04-2016 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 PANTHER PTHR33121 474 782 8.0E-72 T 23-04-2016 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 SUPERFAMILY SSF55073 356 510 5.23E-43 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 PANTHER PTHR33121:SF13 147 154 8.0E-72 T 23-04-2016 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 PANTHER PTHR33121:SF13 474 782 8.0E-72 T 23-04-2016 MSIP34_RS11615 9eb55b2e3d9a6c1659f1da5873066a9e 782 SUPERFAMILY SSF158472 293 341 1.27E-9 T 23-04-2016 MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 SMART SM00382 313 660 4.9E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 SUPERFAMILY SSF52540 301 389 3.99E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 SUPERFAMILY SSF52540 427 678 3.99E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 Pfam PF12696 TraM recognition site of TraD and TraG 595 679 5.2E-8 T 23-04-2016 IPR032689 TraD/TraG, TraM recognition site MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 Gene3D G3DSA:3.40.50.300 299 382 2.1E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 Gene3D G3DSA:3.40.50.300 503 544 2.1E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10295 6a92f7cb885ea34d3249bb44604e9eca 822 Gene3D G3DSA:3.40.50.300 585 674 2.1E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PANTHER PTHR22594:SF4 2 503 4.9E-268 T 23-04-2016 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 500 1.3E-79 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PANTHER PTHR22594 2 503 4.9E-268 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 SUPERFAMILY SSF50249 13 154 3.67E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 SUPERFAMILY SSF55681 161 501 5.16E-119 T 23-04-2016 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 503 44.371 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 Pfam PF01336 OB-fold nucleic acid binding domain 68 145 6.4E-15 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 385 401 9.6E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 9.6E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 9.6E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 9.6E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 9.6E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 Gene3D G3DSA:3.30.930.10 156 499 2.1E-114 T 23-04-2016 MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 Gene3D G3DSA:2.40.50.140 16 153 6.8E-50 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS09395 4d719a5f636aef1dc419e9ff75a5f176 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 503 1.6E-204 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 SUPERFAMILY SSF47384 265 329 8.44E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 SMART SM00388 269 334 3.2E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 Pfam PF00672 HAMP domain 190 255 1.0E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 Gene3D G3DSA:1.10.287.130 266 328 2.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PANTHER PTHR24423 239 481 5.0E-36 T 23-04-2016 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PANTHER PTHR24423 34 53 5.0E-36 T 23-04-2016 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 Gene3D G3DSA:3.30.565.10 337 483 1.7E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 SUPERFAMILY SSF158472 207 256 9.81E-7 T 23-04-2016 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 SMART SM00304 207 259 1.5E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 SUPERFAMILY SSF55874 331 484 6.29E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 480 8.1E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PANTHER PTHR24423:SF445 239 481 5.0E-36 T 23-04-2016 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PANTHER PTHR24423:SF445 34 53 5.0E-36 T 23-04-2016 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 SMART SM00387 377 483 1.6E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 461 1.8E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 1.8E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 480 1.8E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS11770 c637a41a62132ab626afb5e1ad5538f2 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 270 326 1.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS04220 1ba7e3c4b0a31e13ea1ca7ad67fa2b8f 167 PANTHER PTHR41535:SF1 5 162 9.0E-21 T 23-04-2016 MSIP34_RS04220 1ba7e3c4b0a31e13ea1ca7ad67fa2b8f 167 Pfam PF13975 gag-polyprotein putative aspartyl protease 54 140 3.7E-24 T 23-04-2016 MSIP34_RS04220 1ba7e3c4b0a31e13ea1ca7ad67fa2b8f 167 SUPERFAMILY SSF50630 41 145 9.38E-19 T 23-04-2016 IPR021109 Aspartic peptidase domain MSIP34_RS04220 1ba7e3c4b0a31e13ea1ca7ad67fa2b8f 167 PANTHER PTHR41535 5 162 9.0E-21 T 23-04-2016 MSIP34_RS04220 1ba7e3c4b0a31e13ea1ca7ad67fa2b8f 167 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 39 152 5.2E-30 T 23-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PANTHER PTHR24322 206 238 1.2E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PANTHER PTHR24322 60 190 1.2E-65 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 56 243 0.0043 T 23-04-2016 MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 65 297 1.5E-61 T 23-04-2016 MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PANTHER PTHR24322:SF105 206 238 1.2E-65 T 23-04-2016 MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PANTHER PTHR24322:SF105 60 190 1.2E-65 T 23-04-2016 MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 261 281 5.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 196 5.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 145 5.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 74 5.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 227 244 5.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 225 5.7E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 193 221 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 SUPERFAMILY SSF51735 54 299 1.02E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 3.4E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 145 3.4E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 3.4E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS06860 439b481e3134f87d9665f2f7697971a7 301 Gene3D G3DSA:3.40.50.720 51 299 7.0E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS11765 d9772ae64b8a315e97c868d483adbb50 257 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 175 254 4.8E-14 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS11765 d9772ae64b8a315e97c868d483adbb50 257 Gene3D G3DSA:3.30.1150.10 137 256 1.0E-12 T 23-04-2016 MSIP34_RS11765 d9772ae64b8a315e97c868d483adbb50 257 SUPERFAMILY SSF74653 171 228 1.11E-10 T 23-04-2016 MSIP34_RS11765 d9772ae64b8a315e97c868d483adbb50 257 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 176 254 2.8E-12 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS13605 950897035410024cbfd1735b6dab097c 106 PANTHER PTHR35849 1 103 6.7E-15 T 23-04-2016 MSIP34_RS13605 950897035410024cbfd1735b6dab097c 106 Pfam PF13466 STAS domain 14 92 1.8E-13 T 23-04-2016 IPR002645 STAS domain MSIP34_RS13605 950897035410024cbfd1735b6dab097c 106 SUPERFAMILY SSF52091 1 96 1.06E-16 T 23-04-2016 IPR002645 STAS domain MSIP34_RS13605 950897035410024cbfd1735b6dab097c 106 PANTHER PTHR35849:SF2 1 103 6.7E-15 T 23-04-2016 MSIP34_RS13605 950897035410024cbfd1735b6dab097c 106 Gene3D G3DSA:3.30.750.24 1 97 4.6E-16 T 23-04-2016 IPR002645 STAS domain MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 PANTHER PTHR32552 1 34 9.8E-162 T 23-04-2016 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 PANTHER PTHR32552 56 700 9.8E-162 T 23-04-2016 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 PANTHER PTHR32552:SF17 1 34 9.8E-162 T 23-04-2016 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 PANTHER PTHR32552:SF17 56 700 9.8E-162 T 23-04-2016 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 Pfam PF00593 TonB dependent receptor 469 698 2.5E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 162 5.1E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 Gene3D G3DSA:2.40.170.20 178 700 7.2E-160 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 SUPERFAMILY SSF56935 22 700 1.44E-143 T 23-04-2016 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 700 5.0E-126 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS03715 561f7600f5302f44e2c5cbb21c5441b3 701 Gene3D G3DSA:2.170.130.10 22 174 9.5E-40 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 183 3.5E-14 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 SUPERFAMILY SSF56784 5 201 2.76E-30 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 5 184 2.5E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 4 183 5.6E-50 T 23-04-2016 IPR010237 Pyrimidine 5-nucleotidase MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 Gene3D G3DSA:3.40.50.1000 5 201 4.4E-24 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 PANTHER PTHR12725:SF76 2 187 1.5E-28 T 23-04-2016 MSIP34_RS02415 656f6c5dd01a6fd167e50d91181a92ad 209 PANTHER PTHR12725 2 187 1.5E-28 T 23-04-2016 MSIP34_RS01010 d9ee71f696a68fc5aaeb4bb246e65a1c 123 SUPERFAMILY SSF159894 3 103 3.66E-29 T 23-04-2016 MSIP34_RS01010 d9ee71f696a68fc5aaeb4bb246e65a1c 123 Pfam PF04993 TfoX N-terminal domain 10 102 3.4E-28 T 23-04-2016 IPR007076 TfoX, N-terminal MSIP34_RS01010 d9ee71f696a68fc5aaeb4bb246e65a1c 123 Gene3D G3DSA:3.30.1460.30 2 104 9.3E-33 T 23-04-2016 IPR007076 TfoX, N-terminal MSIP34_RS00280 c15a41ebc46faeeb901f8d64c7970f89 164 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 2 164 23.516 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 MSIP34_RS00280 c15a41ebc46faeeb901f8d64c7970f89 164 Gene3D G3DSA:3.40.1410.10 5 161 8.4E-44 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain MSIP34_RS00280 c15a41ebc46faeeb901f8d64c7970f89 164 SUPERFAMILY SSF64288 5 161 3.4E-35 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain MSIP34_RS00280 c15a41ebc46faeeb901f8d64c7970f89 164 Pfam PF04345 Chorismate lyase 6 160 2.1E-22 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 MSIP34_RS00280 c15a41ebc46faeeb901f8d64c7970f89 164 PANTHER PTHR38683 7 159 1.1E-23 T 23-04-2016 MSIP34_RS05315 5f51c0130bcc559a6205c06f9b8a3e57 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 117 7.3E-5 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MSIP34_RS05315 5f51c0130bcc559a6205c06f9b8a3e57 122 Gene3D G3DSA:3.10.180.10 10 121 1.4E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS05315 5f51c0130bcc559a6205c06f9b8a3e57 122 SUPERFAMILY SSF54593 12 121 5.24E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS04545 0fddf8ec0f0804c3e98e09fb920ff368 139 SUPERFAMILY SSF46785 2 133 9.79E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04545 0fddf8ec0f0804c3e98e09fb920ff368 139 Gene3D G3DSA:1.10.10.10 1 79 1.5E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04545 0fddf8ec0f0804c3e98e09fb920ff368 139 Pfam PF01475 Ferric uptake regulator family 11 104 3.4E-11 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 MSIP34_RS04545 0fddf8ec0f0804c3e98e09fb920ff368 139 PANTHER PTHR33202 1 138 3.8E-16 T 23-04-2016 MSIP34_RS11485 19ff3dbe889e86efa98274a62602d67b 286 PANTHER PTHR30373:SF2 14 286 8.2E-75 T 23-04-2016 MSIP34_RS11485 19ff3dbe889e86efa98274a62602d67b 286 PANTHER PTHR30373 14 286 8.2E-75 T 23-04-2016 MSIP34_RS11485 19ff3dbe889e86efa98274a62602d67b 286 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 39 162 8.3E-39 T 23-04-2016 IPR007621 TPM domain MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 Pfam PF12833 Helix-turn-helix domain 228 306 3.8E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 Gene3D G3DSA:1.10.10.60 259 308 6.9E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 SUPERFAMILY SSF52317 1 188 2.65E-44 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 Gene3D G3DSA:1.10.10.60 213 258 4.4E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 PANTHER PTHR11019:SF58 66 313 5.0E-80 T 23-04-2016 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 Pfam PF01965 DJ-1/PfpI family 3 167 2.2E-18 T 23-04-2016 IPR002818 DJ-1/PfpI MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 PANTHER PTHR11019 66 313 5.0E-80 T 23-04-2016 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 Gene3D G3DSA:3.40.50.880 2 212 5.2E-50 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 SMART SM00342 222 305 3.7E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 SUPERFAMILY SSF46689 258 307 8.06E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13665 e23f13f79fdc30140d9efc2af8292cd7 313 SUPERFAMILY SSF46689 205 252 8.51E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 Gene3D G3DSA:3.40.190.10 95 178 2.9E-17 T 23-04-2016 MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 Gene3D G3DSA:3.40.190.10 179 263 2.7E-17 T 23-04-2016 MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 SUPERFAMILY SSF53850 91 298 9.95E-38 T 23-04-2016 MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 SUPERFAMILY SSF46785 4 114 2.36E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 Gene3D G3DSA:1.10.10.10 4 80 2.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.6E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 PANTHER PTHR30537 1 305 1.3E-67 T 23-04-2016 MSIP34_RS06995 820fb3e1fe676c9351254bfe57cdb1eb 305 Pfam PF03466 LysR substrate binding domain 91 295 3.0E-31 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS02955 4958ce587b7403d07b76d7b647afbe8a 228 Pfam PF00483 Nucleotidyl transferase 3 149 2.0E-23 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 MSIP34_RS02955 4958ce587b7403d07b76d7b647afbe8a 228 PANTHER PTHR22572:SF15 2 226 4.2E-43 T 23-04-2016 MSIP34_RS02955 4958ce587b7403d07b76d7b647afbe8a 228 SUPERFAMILY SSF53448 1 223 2.7E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS02955 4958ce587b7403d07b76d7b647afbe8a 228 PANTHER PTHR22572 2 226 4.2E-43 T 23-04-2016 MSIP34_RS02955 4958ce587b7403d07b76d7b647afbe8a 228 Gene3D G3DSA:3.90.550.10 1 226 5.6E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS11480 351afbcac9130783ecc084f568e10ccd 169 PANTHER PTHR30373 7 169 2.0E-64 T 23-04-2016 MSIP34_RS11480 351afbcac9130783ecc084f568e10ccd 169 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 25 146 4.2E-16 T 23-04-2016 IPR007621 TPM domain MSIP34_RS11480 351afbcac9130783ecc084f568e10ccd 169 PANTHER PTHR30373:SF3 7 169 2.0E-64 T 23-04-2016 MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 SUPERFAMILY SSF52540 398 539 4.58E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 SUPERFAMILY SSF52540 274 325 4.58E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 Pfam PF00271 Helicase conserved C-terminal domain 414 528 2.2E-5 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 Pfam PF08463 EcoEI R protein C-terminal 622 776 1.6E-29 T 23-04-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 PANTHER PTHR30195 1 550 1.1E-62 T 23-04-2016 MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 Gene3D G3DSA:3.40.50.300 167 338 1.2E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 SUPERFAMILY SSF52540 143 365 3.76E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 SMART SM00487 168 363 4.8E-21 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 Pfam PF04851 Type III restriction enzyme, res subunit 170 328 2.3E-41 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 PANTHER PTHR30195:SF3 1 550 1.1E-62 T 23-04-2016 MSIP34_RS05560 b59d148614af490736d24a16dbcaf06d 782 Gene3D G3DSA:3.40.50.300 413 537 1.5E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 PANTHER PTHR13504 27 376 8.7E-76 T 23-04-2016 MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 Gene3D G3DSA:1.10.3290.10 39 297 8.4E-62 T 23-04-2016 IPR003812 Fido domain MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 SUPERFAMILY SSF140931 101 293 3.14E-43 T 23-04-2016 IPR003812 Fido domain MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 PIRSF PIRSF038925 13 378 1.2E-106 T 23-04-2016 IPR026287 Adenosine monophosphate-protein transferase MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 Pfam PF13784 Fic/DOC family N-terminal 39 117 8.3E-24 T 23-04-2016 IPR025758 Fic/DOC N-terminal MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 PANTHER PTHR13504:SF32 27 376 8.7E-76 T 23-04-2016 MSIP34_RS11860 5013b0ed747ea290945388c711196c21 378 Pfam PF02661 Fic/DOC family 124 228 2.1E-20 T 23-04-2016 IPR003812 Fido domain MSIP34_RS01395 a3a1ce8ce63e985a563da262b1853d97 221 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 1 200 1.8E-77 T 23-04-2016 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|UniPathway: UPA00294 MSIP34_RS01395 a3a1ce8ce63e985a563da262b1853d97 221 PANTHER PTHR35039 1 199 6.2E-55 T 23-04-2016 MSIP34_RS01395 a3a1ce8ce63e985a563da262b1853d97 221 Gene3D G3DSA:3.20.20.70 1 200 1.9E-64 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS01395 a3a1ce8ce63e985a563da262b1853d97 221 SMART SM00934 2 199 3.9E-32 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS01395 a3a1ce8ce63e985a563da262b1853d97 221 SUPERFAMILY SSF51366 2 202 1.35E-38 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS01395 a3a1ce8ce63e985a563da262b1853d97 221 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 199 1.2E-27 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 MSIP34_RS00435 497eb84eefbdb50c8c0a3023c9779234 466 SUPERFAMILY SSF52540 28 264 2.89E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00435 497eb84eefbdb50c8c0a3023c9779234 466 Gene3D G3DSA:3.40.50.300 37 186 6.2E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00435 497eb84eefbdb50c8c0a3023c9779234 466 PANTHER PTHR35894:SF1 2 280 5.8E-77 T 23-04-2016 MSIP34_RS00435 497eb84eefbdb50c8c0a3023c9779234 466 PANTHER PTHR35894 2 280 5.8E-77 T 23-04-2016 MSIP34_RS00435 497eb84eefbdb50c8c0a3023c9779234 466 Pfam PF13401 AAA domain 41 169 2.7E-22 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS05100 8d08ea06819d550e8b2daa5cc1d40980 99 Pfam PF13202 EF hand 33 49 6.0E-6 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS05100 8d08ea06819d550e8b2daa5cc1d40980 99 Pfam PF13202 EF hand 57 74 1.8E-4 T 23-04-2016 IPR002048 EF-hand domain GO:0005509 MSIP34_RS05100 8d08ea06819d550e8b2daa5cc1d40980 99 SUPERFAMILY SSF47473 33 75 2.35E-9 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05100 8d08ea06819d550e8b2daa5cc1d40980 99 Gene3D G3DSA:1.10.238.10 28 75 2.3E-7 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS12910 98f9001e48077e39f72e82202584570c 191 Pfam PF01814 Hemerythrin HHE cation binding domain 24 143 2.1E-13 T 23-04-2016 IPR012312 Haemerythrin-like MSIP34_RS12910 98f9001e48077e39f72e82202584570c 191 PANTHER PTHR35585:SF1 23 155 4.0E-20 T 23-04-2016 MSIP34_RS12910 98f9001e48077e39f72e82202584570c 191 Gene3D G3DSA:1.20.120.520 13 162 4.1E-12 T 23-04-2016 MSIP34_RS12910 98f9001e48077e39f72e82202584570c 191 PANTHER PTHR35585 23 155 4.0E-20 T 23-04-2016 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 8 338 38.225 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 PANTHER PTHR11922:SF5 1 338 1.9E-115 T 23-04-2016 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 9 67 1.3E-17 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 Pfam PF00591 Glycosyl transferase family, a/b domain 79 328 3.6E-97 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 PANTHER PTHR11922 1 338 1.9E-115 T 23-04-2016 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 335 3.8E-129 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 Gene3D G3DSA:1.20.970.10 8 72 6.4E-27 T 23-04-2016 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 Gene3D G3DSA:3.40.1030.10 79 338 7.7E-109 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 SUPERFAMILY SSF52418 79 337 8.11E-98 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 MSIP34_RS12635 ed5173e4e3118be90c9cbf71c8aef654 342 SUPERFAMILY SSF47648 4 71 2.35E-18 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain MSIP34_RS12150 7a48394be31b846635a6a95545e6b020 182 SUPERFAMILY SSF54211 4 175 1.29E-53 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS12150 7a48394be31b846635a6a95545e6b020 182 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 9 173 9.2E-61 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS12150 7a48394be31b846635a6a95545e6b020 182 Gene3D G3DSA:3.30.230.60 5 176 9.5E-63 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS12150 7a48394be31b846635a6a95545e6b020 182 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 7 171 2.8E-40 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS12115 3c9f700de6bac94e99e8aa5dc3bc24a6 127 Gene3D G3DSA:3.10.450.50 17 127 9.0E-14 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS12115 3c9f700de6bac94e99e8aa5dc3bc24a6 127 Pfam PF14534 Domain of unknown function (DUF4440) 16 121 1.0E-8 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 MSIP34_RS12115 3c9f700de6bac94e99e8aa5dc3bc24a6 127 SUPERFAMILY SSF54427 6 127 2.34E-22 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 SUPERFAMILY SSF89550 10 90 1.59E-50 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 SUPERFAMILY SSF89550 171 284 1.59E-50 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 SMART SM00481 12 77 1.2E-18 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 Pfam PF02811 PHP domain 13 190 1.3E-10 T 23-04-2016 IPR004013 PHP domain GO:0003824 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 PANTHER PTHR30007:SF4 3 282 4.5E-72 T 23-04-2016 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 Gene3D G3DSA:3.20.20.140 163 261 1.3E-41 T 23-04-2016 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 Gene3D G3DSA:3.20.20.140 11 94 1.3E-41 T 23-04-2016 MSIP34_RS04680 7a0063cbb8f3db1d71e7d491bff6fb25 298 PANTHER PTHR30007 3 282 4.5E-72 T 23-04-2016 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 Gene3D G3DSA:3.90.470.20 1 124 1.4E-38 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 25.285 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 6.9E-37 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 125 2.0E-32 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 99 6.0E-21 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 96 4.8E-21 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS08985 a7fc3132eb226fe197a2da56b0b8c7cd 126 SUPERFAMILY SSF56214 1 125 4.06E-30 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 Pfam PF02108 Flagellar assembly protein FliH 79 205 1.0E-33 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PANTHER PTHR34982:SF1 1 213 4.7E-28 T 23-04-2016 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PANTHER PTHR34982 1 213 4.7E-28 T 23-04-2016 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 39 61 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 170 186 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 142 169 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 101 118 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 62 80 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 187 212 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS03875 1e56b69351c06aa516b2e4b6994992f3 217 PRINTS PR01003 Flagellar assembly protein FliH signature 81 100 2.4E-11 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 PIRSF PIRSF004649 1 202 3.9E-60 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 Pfam PF05494 MlaC protein 32 194 1.9E-61 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 PANTHER PTHR36573 1 198 5.5E-47 T 23-04-2016 MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 Gene3D G3DSA:1.10.10.640 169 199 9.6E-30 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 Gene3D G3DSA:1.10.10.640 70 110 9.6E-30 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 Gene3D G3DSA:3.10.450.50 25 69 1.5E-34 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS01345 aa5f947c699bc9d331e710a9813c8225 202 Gene3D G3DSA:3.10.450.50 113 168 1.5E-34 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS09990 7aed46ddd2585b0a1be4e09e68c37a27 739 SUPERFAMILY SSF103515 428 739 5.23E-47 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS09990 7aed46ddd2585b0a1be4e09e68c37a27 739 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 278 722 2.5E-27 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 MSIP34_RS09990 7aed46ddd2585b0a1be4e09e68c37a27 739 Pfam PF03797 Autotransporter beta-domain 465 705 1.2E-45 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS09990 7aed46ddd2585b0a1be4e09e68c37a27 739 SMART SM00869 466 729 2.8E-42 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS09990 7aed46ddd2585b0a1be4e09e68c37a27 739 Gene3D G3DSA:2.40.128.130 460 739 4.7E-54 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS08675 f698fb71bcfa2e7d6f5add27b1fcbcf5 208 PIRSF PIRSF006170 1 208 3.1E-54 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 MSIP34_RS08675 f698fb71bcfa2e7d6f5add27b1fcbcf5 208 PANTHER PTHR38035 2 208 2.2E-36 T 23-04-2016 MSIP34_RS08675 f698fb71bcfa2e7d6f5add27b1fcbcf5 208 Pfam PF09976 Tetratricopeptide repeat-like domain 15 207 8.2E-59 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 16 711 6.0E-290 T 23-04-2016 IPR017750 ATPase, type I secretion system MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 SUPERFAMILY SSF90123 155 467 8.89E-57 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 Gene3D G3DSA:3.40.50.300 482 705 4.3E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 Gene3D G3DSA:3.90.70.10 13 138 1.2E-39 T 23-04-2016 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 Gene3D G3DSA:1.20.1560.10 155 467 1.7E-57 T 23-04-2016 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 Pfam PF00005 ABC transporter 499 648 1.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 Pfam PF03412 Peptidase C39 family 10 137 2.9E-6 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 SUPERFAMILY SSF52540 475 703 7.39E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 PANTHER PTHR24221 137 706 6.5E-223 T 23-04-2016 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 PANTHER PTHR24221 1 77 6.5E-223 T 23-04-2016 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 Pfam PF00664 ABC transporter transmembrane region 170 430 6.5E-28 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 SMART SM00382 508 694 2.9E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 PANTHER PTHR24221:SF248 137 706 6.5E-223 T 23-04-2016 MSIP34_RS05145 57e866097e3e88dde1065a960129b471 717 PANTHER PTHR24221:SF248 1 77 6.5E-223 T 23-04-2016 MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 PRINTS PR00340 P-II protein signature 52 75 5.4E-19 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 PRINTS PR00340 P-II protein signature 2 17 5.4E-19 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 PRINTS PR00340 P-II protein signature 83 103 5.4E-19 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 Gene3D G3DSA:3.30.70.120 1 104 2.5E-26 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 Pfam PF00543 Nitrogen regulatory protein P-II 4 102 3.7E-22 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 SUPERFAMILY SSF54913 1 105 8.9E-26 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 SMART SM00938 4 105 2.3E-28 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 MSIP34_RS11275 dfa2a87edba3eb4a91895c969b08609f 111 PANTHER PTHR30115 1 101 1.3E-24 T 23-04-2016 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 Pfam PF00809 Pterin binding enzyme 18 257 8.1E-91 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 6.4E-106 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 PANTHER PTHR20941:SF1 13 273 8.9E-127 T 23-04-2016 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 PANTHER PTHR20941 13 273 8.9E-127 T 23-04-2016 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 SUPERFAMILY SSF51717 3 272 3.14E-107 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 MSIP34_RS09470 1e844b64aa352f84580524abdf6d26f2 273 Gene3D G3DSA:3.20.20.20 12 273 1.7E-113 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 PANTHER PTHR24220 327 343 5.5E-143 T 23-04-2016 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 PANTHER PTHR24220 4 276 5.5E-143 T 23-04-2016 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 SUPERFAMILY SSF52540 3 246 3.59E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 Pfam PF12857 TOBE-like domain 290 345 3.4E-18 T 23-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 Gene3D G3DSA:3.40.50.300 4 245 3.3E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 PANTHER PTHR24220:SF123 327 343 5.5E-143 T 23-04-2016 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 PANTHER PTHR24220:SF123 4 276 5.5E-143 T 23-04-2016 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 Gene3D G3DSA:2.40.50.100 293 343 1.0E-4 T 23-04-2016 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 SUPERFAMILY SSF50331 239 350 4.13E-13 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 SMART SM00382 27 214 2.0E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 Pfam PF00005 ABC transporter 18 164 1.7E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS10855 55d561611d486c57fe61bb5b452003da 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.7E-122 T 23-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 PANTHER PTHR21000:SF9 1 601 0.0 T 23-04-2016 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 602 1.9E-282 T 23-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 SUPERFAMILY SSF143975 2 417 1.28E-134 T 23-04-2016 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 SUPERFAMILY SSF52016 418 603 2.51E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 Pfam PF00920 Dehydratase family 66 600 1.6E-157 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS09600 468f2abdc124d3f904e082669343bd22 604 PANTHER PTHR21000 1 601 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS03790 86904f7f959937f525f40680b5ac2b84 333 PANTHER PTHR22550:SF8 43 203 2.7E-13 T 23-04-2016 MSIP34_RS03790 86904f7f959937f525f40680b5ac2b84 333 Pfam PF13519 von Willebrand factor type A domain 86 203 1.1E-16 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS03790 86904f7f959937f525f40680b5ac2b84 333 Gene3D G3DSA:3.40.50.410 84 207 3.4E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS03790 86904f7f959937f525f40680b5ac2b84 333 PANTHER PTHR22550 43 203 2.7E-13 T 23-04-2016 MSIP34_RS03790 86904f7f959937f525f40680b5ac2b84 333 SMART SM00327 83 261 5.9E-11 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS03790 86904f7f959937f525f40680b5ac2b84 333 SUPERFAMILY SSF53300 84 233 2.52E-19 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 255 292 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 SUPERFAMILY SSF53383 21 452 4.39E-91 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 Gene3D G3DSA:3.40.640.10 64 325 4.2E-71 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 PANTHER PTHR11986:SF17 7 457 8.5E-105 T 23-04-2016 MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 PANTHER PTHR11986 7 457 8.5E-105 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 Pfam PF00202 Aminotransferase class-III 32 451 5.2E-79 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS06130 9a095996748609eb9a1fe1cf1d09ae29 457 Gene3D G3DSA:3.90.1150.10 326 452 1.2E-27 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 Gene3D G3DSA:3.10.150.10 1 118 1.0E-29 T 23-04-2016 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 Gene3D G3DSA:3.10.150.10 129 249 1.6E-38 T 23-04-2016 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.6E-101 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 1.3E-34 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 SMART SM00480 17 363 2.6E-132 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 2.7E-34 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 4.8E-33 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 PANTHER PTHR30478 3 367 2.0E-123 T 23-04-2016 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 SUPERFAMILY SSF55979 1 116 2.69E-27 T 23-04-2016 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 Gene3D G3DSA:3.10.150.10 250 367 8.2E-37 T 23-04-2016 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 PIRSF PIRSF000804 1 367 3.3E-116 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 SUPERFAMILY SSF55979 129 245 2.3E-30 T 23-04-2016 MSIP34_RS00010 b5f0a6b4281b948c6a842e59f3baf36e 367 SUPERFAMILY SSF55979 247 367 2.66E-36 T 23-04-2016 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 SUPERFAMILY SSF52440 1 118 4.03E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 116 4.1E-36 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 Hamap MF_00162 Glutathione synthetase [gshB]. 1 310 143.422 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 PANTHER PTHR21621 1 307 1.3E-112 T 23-04-2016 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 120 293 3.4E-74 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 Gene3D G3DSA:3.30.470.20 188 295 1.6E-45 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 Gene3D G3DSA:3.30.1490.20 135 187 5.1E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 PANTHER PTHR21621:SF4 1 307 1.3E-112 T 23-04-2016 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 307 1.4E-117 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 SUPERFAMILY SSF56059 119 306 1.99E-53 T 23-04-2016 MSIP34_RS13010 d382b3455cf175f7b1349d7240b0ee98 310 Gene3D G3DSA:3.40.50.20 1 125 9.3E-40 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 PANTHER PTHR11601 6 383 1.4E-142 T 23-04-2016 MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 Pfam PF00266 Aminotransferase class-V 6 366 1.1E-72 T 23-04-2016 IPR000192 Aminotransferase class V domain MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 PIRSF PIRSF005572 2 381 1.6E-128 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 Gene3D G3DSA:3.40.640.10 17 250 5.2E-75 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 Gene3D G3DSA:3.90.1150.10 251 366 2.0E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 PANTHER PTHR11601:SF20 6 383 1.4E-142 T 23-04-2016 MSIP34_RS09345 8a45b3c35e7f967ccb264c80d82a35d6 385 SUPERFAMILY SSF53383 5 375 4.21E-98 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS04585 d4d6bce184063dc12f3644ef63133f1d 122 PANTHER PTHR33751 34 104 1.1E-13 T 23-04-2016 MSIP34_RS04585 d4d6bce184063dc12f3644ef63133f1d 122 Pfam PF00034 Cytochrome c 36 103 1.2E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS04585 d4d6bce184063dc12f3644ef63133f1d 122 Gene3D G3DSA:1.10.760.10 35 105 1.1E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS04585 d4d6bce184063dc12f3644ef63133f1d 122 PANTHER PTHR33751:SF3 34 104 1.1E-13 T 23-04-2016 MSIP34_RS04585 d4d6bce184063dc12f3644ef63133f1d 122 SUPERFAMILY SSF46626 34 104 1.34E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 Gene3D G3DSA:3.40.1020.10 333 502 7.5E-58 T 23-04-2016 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 SUPERFAMILY SSF55021 409 502 1.76E-28 T 23-04-2016 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 SUPERFAMILY SSF53686 4 355 2.49E-101 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 PANTHER PTHR10314:SF30 1 358 1.5E-211 T 23-04-2016 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 502 7.2E-248 T 23-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 419 502 2.7E-23 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 408 1.7E-24 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 303 7.9E-77 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 Gene3D G3DSA:3.40.50.1100 107 332 6.6E-81 T 23-04-2016 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 Gene3D G3DSA:3.40.50.1100 24 106 1.5E-4 T 23-04-2016 MSIP34_RS00865 581af297824f12d5f0c72af21945159a 503 PANTHER PTHR10314 1 358 1.5E-211 T 23-04-2016 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 234 6.9E-34 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 2 238 62.9 T 23-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 SUPERFAMILY SSF88659 150 240 8.22E-22 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PRINTS PR00046 Major sigma-70 factor signature 188 200 2.6E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PRINTS PR00046 Major sigma-70 factor signature 65 73 2.6E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PRINTS PR00046 Major sigma-70 factor signature 220 231 2.6E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PRINTS PR00046 Major sigma-70 factor signature 41 54 2.6E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PRINTS PR00046 Major sigma-70 factor signature 205 220 2.6E-11 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Gene3D G3DSA:1.10.10.10 173 237 1.8E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PANTHER PTHR30385:SF7 2 237 1.1E-63 T 23-04-2016 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 SUPERFAMILY SSF88659 87 159 1.09E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PANTHER PTHR30385 2 237 1.1E-63 T 23-04-2016 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Gene3D G3DSA:1.10.601.10 10 77 3.6E-14 T 23-04-2016 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 SUPERFAMILY SSF88946 4 86 4.06E-23 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 PIRSF PIRSF000770 1 241 1.6E-44 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 14 236 1.1E-84 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Pfam PF04539 Sigma-70 region 3 95 165 2.9E-10 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Gene3D G3DSA:1.10.10.10 86 131 8.2E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Pfam PF04545 Sigma-70, region 4 184 233 2.9E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 41 54 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04020 996eb47e0a036b8fda64ccc2e8e82d1e 244 Pfam PF04542 Sigma-70 region 2 14 86 8.4E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 SUPERFAMILY SSF141868 428 676 8.89E-88 T 23-04-2016 IPR001633 EAL domain MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 SUPERFAMILY SSF158472 180 229 7.98E-5 T 23-04-2016 MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 SMART SM00052 422 668 2.7E-106 T 23-04-2016 IPR001633 EAL domain MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 Gene3D G3DSA:3.20.20.450 426 675 3.6E-95 T 23-04-2016 IPR001633 EAL domain MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 Pfam PF00563 EAL domain 428 663 1.6E-72 T 23-04-2016 IPR001633 EAL domain MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 Pfam PF00990 Diguanylate cyclase, GGDEF domain 252 407 8.4E-45 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 PANTHER PTHR33121:SF13 374 673 6.4E-75 T 23-04-2016 MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 411 4.8E-39 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 Gene3D G3DSA:3.30.70.270 253 419 1.6E-53 T 23-04-2016 MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 SUPERFAMILY SSF55073 258 414 2.67E-46 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 Pfam PF17152 Periplasmic sensor domain 47 116 2.3E-13 T 23-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 PANTHER PTHR33121 374 673 6.4E-75 T 23-04-2016 MSIP34_RS04720 1e2cc3e919ad9dd73a573c7fe25c7561 682 SMART SM00267 241 412 6.0E-59 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07700 8c33a5aee5d4ee1f8f3658138c8c7e1a 206 Pfam PF13511 Domain of unknown function (DUF4124) 10 62 2.3E-8 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 MSIP34_RS09175 0646d70ce55de9a5928c0b20bded25f2 321 Pfam PF01757 Acyltransferase family 8 279 7.9E-24 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 PIRSF PIRSF006004 1 360 1.3E-153 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 PANTHER PTHR30544:SF5 4 359 5.8E-178 T 23-04-2016 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 347 73.307 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 Gene3D G3DSA:3.20.20.70 102 320 8.8E-14 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 SUPERFAMILY SSF102114 102 312 5.76E-15 T 23-04-2016 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 Pfam PF04055 Radical SAM superfamily 106 277 1.5E-19 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 PANTHER PTHR30544 4 359 5.8E-178 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS08710 912f4830929236d46e5146519698ea85 367 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 352 2.2E-143 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.828 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 PIRSF PIRSF002161 1 179 1.2E-66 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 PANTHER PTHR11994 1 178 9.1E-97 T 23-04-2016 MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 Pfam PF00281 Ribosomal protein L5 24 80 1.9E-28 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 SUPERFAMILY SSF55282 3 179 3.06E-79 T 23-04-2016 IPR022803 Ribosomal protein L5 domain MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 Gene3D G3DSA:3.30.1440.10 1 179 1.5E-79 T 23-04-2016 IPR022803 Ribosomal protein L5 domain MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.2E-42 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal MSIP34_RS01640 06e11d1f4667653b74e2fd7dbbca1318 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 Gene3D G3DSA:1.20.120.140 55 135 2.1E-32 T 23-04-2016 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 54 324 2.3E-106 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 SMART SM00963 31 111 1.9E-27 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 298 311 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 Pfam PF00448 SRP54-type protein, GTPase domain 125 324 1.3E-73 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 PANTHER PTHR11564 21 325 1.5E-130 T 23-04-2016 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 54 325 60.388 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 Pfam PF02881 SRP54-type protein, helical bundle domain 42 107 1.1E-15 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 SMART SM00962 125 325 1.5E-113 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 PANTHER PTHR11564:SF16 21 325 1.5E-130 T 23-04-2016 MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 SMART SM00382 124 314 1.8E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 Gene3D G3DSA:3.40.50.300 136 324 3.0E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS09730 c2f0e797be88eb0bf0608a35a6c49989 325 SUPERFAMILY SSF52540 76 324 1.74E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14765 ea3fe759984debdb70657390a46f1bc8 108 ProSitePatterns PS00360 Ribosomal protein S9 signature. 66 84 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 MSIP34_RS14765 ea3fe759984debdb70657390a46f1bc8 108 SUPERFAMILY SSF54211 3 107 1.97E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS14765 ea3fe759984debdb70657390a46f1bc8 108 Pfam PF00380 Ribosomal protein S9/S16 7 108 2.8E-35 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS14765 ea3fe759984debdb70657390a46f1bc8 108 Gene3D G3DSA:3.30.230.10 2 107 4.2E-38 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS14765 ea3fe759984debdb70657390a46f1bc8 108 PANTHER PTHR21569 4 108 1.1E-47 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS13725 7a6068c56be0fd0b71e970af0859cf1c 287 Pfam PF01841 Transglutaminase-like superfamily 120 224 2.1E-25 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS13725 7a6068c56be0fd0b71e970af0859cf1c 287 Gene3D G3DSA:3.90.260.10 166 226 6.8E-10 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS13725 7a6068c56be0fd0b71e970af0859cf1c 287 SUPERFAMILY SSF54001 101 251 1.02E-38 T 23-04-2016 MSIP34_RS13725 7a6068c56be0fd0b71e970af0859cf1c 287 SMART SM00460 162 226 3.2E-18 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS13725 7a6068c56be0fd0b71e970af0859cf1c 287 PANTHER PTHR33490:SF3 2 256 4.1E-72 T 23-04-2016 MSIP34_RS13725 7a6068c56be0fd0b71e970af0859cf1c 287 PANTHER PTHR33490 2 256 4.1E-72 T 23-04-2016 MSIP34_RS02220 5003c132902c76de47e6be200bc82957 127 Gene3D G3DSA:3.10.180.10 3 122 7.7E-29 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS02220 5003c132902c76de47e6be200bc82957 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 117 8.8E-21 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MSIP34_RS02220 5003c132902c76de47e6be200bc82957 127 SUPERFAMILY SSF54593 2 123 7.12E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 PANTHER PTHR33569 1 101 4.6E-62 T 23-04-2016 MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 100 5.3E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 Pfam PF00699 Urease beta subunit 3 99 6.2E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.872 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 PANTHER PTHR33569:SF1 1 101 4.6E-62 T 23-04-2016 MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 SUPERFAMILY SSF51278 1 101 1.31E-47 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS03605 e0cda6b3af4e10dbb00f1679462b82c0 102 Gene3D G3DSA:2.10.150.10 1 101 1.4E-51 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 50 73 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 Gene3D G3DSA:3.30.830.10 231 430 4.4E-30 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 PANTHER PTHR11851 8 441 2.9E-112 T 23-04-2016 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 SUPERFAMILY SSF63411 244 433 2.23E-38 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 PANTHER PTHR11851:SF136 8 441 2.9E-112 T 23-04-2016 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 Pfam PF05193 Peptidase M16 inactive domain 183 366 2.0E-31 T 23-04-2016 IPR007863 Peptidase M16, C-terminal MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 Gene3D G3DSA:3.30.830.10 18 229 1.3E-58 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 SUPERFAMILY SSF63411 16 223 4.83E-62 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 MSIP34_RS09725 c62f166c7140b01504616a53ab2dc688 449 Pfam PF00675 Insulinase (Peptidase family M16) 31 174 1.5E-27 T 23-04-2016 IPR011765 Peptidase M16, N-terminal MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 257 6.1E-57 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 PIRSF PIRSF006487 1 370 5.0E-78 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 SUPERFAMILY SSF101790 283 366 3.43E-17 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 Gene3D G3DSA:3.30.1360.120 118 234 3.2E-21 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 Gene3D G3DSA:3.30.1360.120 3 71 2.2E-11 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 Gene3D G3DSA:3.30.70.1400 72 117 2.1E-12 T 23-04-2016 MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 265 343 3.4E-15 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 SUPERFAMILY SSF103025 2 277 3.14E-68 T 23-04-2016 MSIP34_RS12420 3b1f46a7d6d48d495972e1daeb552aab 371 Gene3D G3DSA:2.40.30.110 283 343 8.2E-14 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 PIRSF PIRSF006230 1 279 2.8E-90 T 23-04-2016 IPR016478 GTPase, MTG1 MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 Gene3D G3DSA:3.40.50.300 16 173 2.9E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 PANTHER PTHR11089 2 283 7.2E-64 T 23-04-2016 MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 SUPERFAMILY SSF52540 9 246 2.51E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 274 3.8E-96 T 23-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 Gene3D G3DSA:1.10.1580.10 178 268 1.1E-23 T 23-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain MSIP34_RS05450 e5c9afcb541deaca2ff25e919d941b78 318 Pfam PF01926 50S ribosome-binding GTPase 118 185 5.9E-16 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 SUPERFAMILY SSF111369 61 303 1.06E-66 T 23-04-2016 MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 379 2.0E-86 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 PANTHER PTHR30158 1 388 1.4E-156 T 23-04-2016 MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 71 299 1.5E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 Gene3D G3DSA:2.40.50.100 180 211 2.0E-22 T 23-04-2016 MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 Gene3D G3DSA:2.40.50.100 72 105 2.0E-22 T 23-04-2016 MSIP34_RS12475 530533de52293a2a57580767ff349a86 411 PANTHER PTHR30158:SF2 1 388 1.4E-156 T 23-04-2016 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 SMART SM00448 6 119 2.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 PANTHER PTHR26402:SF210 6 213 1.9E-73 T 23-04-2016 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 1.6E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 1.6E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 1.6E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 PANTHER PTHR26402 6 213 1.9E-73 T 23-04-2016 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 SUPERFAMILY SSF52172 6 135 1.15E-32 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 Gene3D G3DSA:1.10.10.10 124 213 7.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 SUPERFAMILY SSF46894 146 213 1.7E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 Pfam PF00072 Response regulator receiver domain 8 119 2.3E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 SMART SM00421 149 206 2.1E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 7.2E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS03740 3796c5aed2259a05d8888be87303df3e 214 Gene3D G3DSA:3.40.50.2300 6 123 2.2E-33 T 23-04-2016 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 PANTHER PTHR33778:SF3 7 233 1.3E-71 T 23-04-2016 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 PRINTS PR01837 MgtC/SapB protein signature 41 59 7.7E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 PRINTS PR01837 MgtC/SapB protein signature 94 118 7.7E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 PRINTS PR01837 MgtC/SapB protein signature 67 89 7.7E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 PRINTS PR01837 MgtC/SapB protein signature 22 41 7.7E-40 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 PANTHER PTHR33778 7 233 1.3E-71 T 23-04-2016 MSIP34_RS13710 68752c0220ba67ad9196c6cb7e6c0cd9 238 Pfam PF02308 MgtC family 19 140 2.4E-33 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 PANTHER PTHR23502 10 395 1.2E-98 T 23-04-2016 MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 Gene3D G3DSA:1.20.1250.20 11 194 1.7E-27 T 23-04-2016 MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 SUPERFAMILY SSF103473 11 396 3.79E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 PANTHER PTHR23502:SF19 10 395 1.2E-98 T 23-04-2016 MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 Pfam PF07690 Major Facilitator Superfamily 19 355 3.3E-42 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 363 2.7E-73 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 MSIP34_RS07760 f29d38584052f9823a06ef5f6534750a 404 Gene3D G3DSA:1.20.1250.20 196 401 6.5E-10 T 23-04-2016 MSIP34_RS01815 c64b2f058d5ae3ae1644d1d1468eae82 222 SUPERFAMILY SSF58104 121 200 1.22E-11 T 23-04-2016 MSIP34_RS01815 c64b2f058d5ae3ae1644d1d1468eae82 222 Gene3D G3DSA:1.10.287.950 117 200 1.3E-11 T 23-04-2016 MSIP34_RS01815 c64b2f058d5ae3ae1644d1d1468eae82 222 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 20 125 2.1E-13 T 23-04-2016 IPR029095 NarX-like, N-terminal MSIP34_RS01790 092a292a3d27ae648a20417db7456ba8 104 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 100 1.6E-28 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 MSIP34_RS01790 092a292a3d27ae648a20417db7456ba8 104 Gene3D G3DSA:2.102.10.10 2 103 1.3E-30 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS01790 092a292a3d27ae648a20417db7456ba8 104 SUPERFAMILY SSF50022 1 103 2.75E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 MSIP34_RS01790 092a292a3d27ae648a20417db7456ba8 104 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 99 4.1E-15 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 MSIP34_RS01790 092a292a3d27ae648a20417db7456ba8 104 PANTHER PTHR21496 1 99 6.7E-20 T 23-04-2016 MSIP34_RS10545 384814c52bf5620d8362fa588253ae8e 131 Pfam PF13673 Acetyltransferase (GNAT) domain 32 122 1.9E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS10545 384814c52bf5620d8362fa588253ae8e 131 Gene3D G3DSA:3.40.630.30 1 120 8.5E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS10545 384814c52bf5620d8362fa588253ae8e 131 SUPERFAMILY SSF55729 2 122 9.43E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 Gene3D G3DSA:3.30.930.10 10 327 1.5E-130 T 23-04-2016 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 Pfam PF01409 tRNA synthetases class II core domain (F) 93 327 3.3E-106 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 SUPERFAMILY SSF46589 15 100 2.3E-19 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 7.8E-21 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 PANTHER PTHR11538 81 327 3.0E-109 T 23-04-2016 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 1.8E-107 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 SUPERFAMILY SSF55681 93 327 1.33E-80 T 23-04-2016 MSIP34_RS03690 b66651dd88eafe94fbdb9072c4269664 328 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 327 48.002 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 Pfam PF01170 Putative RNA methylase family UPF0020 164 369 1.2E-56 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 197 208 - T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 PANTHER PTHR14911 5 214 1.2E-54 T 23-04-2016 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 PANTHER PTHR14911 253 372 1.2E-54 T 23-04-2016 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 Gene3D G3DSA:3.40.50.150 152 216 1.6E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 Gene3D G3DSA:3.40.50.150 253 369 1.6E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 SMART SM00981 58 156 1.8E-19 T 23-04-2016 IPR004114 THUMP domain GO:0003723 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 Pfam PF02926 THUMP domain 24 155 1.2E-12 T 23-04-2016 IPR004114 THUMP domain GO:0003723 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 PANTHER PTHR14911:SF13 5 214 1.2E-54 T 23-04-2016 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 PANTHER PTHR14911:SF13 253 372 1.2E-54 T 23-04-2016 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 209 1.2E-5 T 23-04-2016 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 310 1.2E-5 T 23-04-2016 MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 SUPERFAMILY SSF53335 256 370 4.52E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04560 d632d7b3e239e8b5e51a53ae7921440d 387 SUPERFAMILY SSF53335 144 219 4.52E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS11835 5176644a1a9940e78347906fc10a609c 128 PANTHER PTHR35006 1 128 2.0E-40 T 23-04-2016 MSIP34_RS11835 5176644a1a9940e78347906fc10a609c 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 5.3E-6 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MSIP34_RS11835 5176644a1a9940e78347906fc10a609c 128 Gene3D G3DSA:3.10.180.10 1 118 4.7E-33 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS11835 5176644a1a9940e78347906fc10a609c 128 SUPERFAMILY SSF54593 2 122 7.01E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS05290 9d3c68a6266c182c4d6791921f7c6f8d 240 PANTHER PTHR21666 94 236 4.2E-33 T 23-04-2016 MSIP34_RS05290 9d3c68a6266c182c4d6791921f7c6f8d 240 Pfam PF01464 Transglycosylase SLT domain 114 210 1.8E-24 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS05290 9d3c68a6266c182c4d6791921f7c6f8d 240 Gene3D G3DSA:1.10.530.10 108 236 6.4E-44 T 23-04-2016 MSIP34_RS05290 9d3c68a6266c182c4d6791921f7c6f8d 240 SUPERFAMILY SSF53955 102 234 8.13E-42 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Gene3D G3DSA:3.40.1190.10 80 310 4.2E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 SUPERFAMILY SSF53623 98 312 6.02E-51 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 SUPERFAMILY SSF63418 1 95 8.89E-26 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Pfam PF01225 Mur ligase family, catalytic domain 23 92 3.3E-11 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 PANTHER PTHR23135:SF3 11 445 1.4E-157 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 1.0E-13 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Gene3D G3DSA:3.90.190.20 313 448 1.7E-45 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 27 443 5.1E-137 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Gene3D G3DSA:3.40.1390.10 1 69 3.1E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 446 34.49 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 SUPERFAMILY SSF53244 313 444 2.93E-39 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 Pfam PF08245 Mur ligase middle domain 103 293 1.5E-47 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02325 7a61bf4daafacd102f0f4f71125abb8b 457 PANTHER PTHR23135 11 445 1.4E-157 T 23-04-2016 MSIP34_RS00845 fe8b1a50494a1b8b03b152a1c083ba4f 119 PANTHER PTHR37466 1 119 3.4E-48 T 23-04-2016 MSIP34_RS00845 fe8b1a50494a1b8b03b152a1c083ba4f 119 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 3 116 1.0E-56 T 23-04-2016 IPR018714 Protein of unknown function DUF2237 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 PIRSF PIRSF000130 1 486 5.4E-206 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 PANTHER PTHR11911:SF6 298 483 1.6E-246 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 PANTHER PTHR11911:SF6 5 280 1.6E-246 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 1.0E-164 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 Gene3D G3DSA:3.20.20.70 5 484 3.1E-203 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 85.137 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 6.3E-194 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 SUPERFAMILY SSF54631 94 201 8.97E-28 T 23-04-2016 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 PANTHER PTHR11911 298 483 1.6E-246 T 23-04-2016 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 PANTHER PTHR11911 5 280 1.6E-246 T 23-04-2016 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 SMART SM00116 95 142 2.9E-12 T 23-04-2016 IPR000644 CBS domain MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 SMART SM00116 156 204 4.3E-7 T 23-04-2016 IPR000644 CBS domain MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 SUPERFAMILY SSF51412 215 476 1.22E-126 T 23-04-2016 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 SUPERFAMILY SSF51412 2 89 1.22E-126 T 23-04-2016 MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 Pfam PF00571 CBS domain 150 199 9.5E-5 T 23-04-2016 IPR000644 CBS domain MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 Pfam PF00571 CBS domain 95 138 5.8E-10 T 23-04-2016 IPR000644 CBS domain MSIP34_RS06245 1ff7429f95794ed076239b892d89bb25 486 SMART SM01240 6 472 0.0 T 23-04-2016 MSIP34_RS01190 daa63c4ccd44e599ab1e968837ab9b81 309 PANTHER PTHR12715:SF5 5 302 1.1E-77 T 23-04-2016 MSIP34_RS01190 daa63c4ccd44e599ab1e968837ab9b81 309 SUPERFAMILY SSF103481 49 154 7.06E-11 T 23-04-2016 MSIP34_RS01190 daa63c4ccd44e599ab1e968837ab9b81 309 Pfam PF00892 EamA-like transporter family 14 151 7.1E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS01190 daa63c4ccd44e599ab1e968837ab9b81 309 Pfam PF00892 EamA-like transporter family 167 303 2.1E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS01190 daa63c4ccd44e599ab1e968837ab9b81 309 PANTHER PTHR12715 5 302 1.1E-77 T 23-04-2016 MSIP34_RS01190 daa63c4ccd44e599ab1e968837ab9b81 309 SUPERFAMILY SSF103481 225 306 1.7E-15 T 23-04-2016 MSIP34_RS07005 8040593e6b6f1dbd7dc751addb82ebbe 254 PANTHER PTHR12553:SF7 1 254 1.5E-69 T 23-04-2016 MSIP34_RS07005 8040593e6b6f1dbd7dc751addb82ebbe 254 PANTHER PTHR12553 1 254 1.5E-69 T 23-04-2016 MSIP34_RS07005 8040593e6b6f1dbd7dc751addb82ebbe 254 SMART SM00849 35 227 0.002 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07005 8040593e6b6f1dbd7dc751addb82ebbe 254 SUPERFAMILY SSF56281 1 253 5.37E-45 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07005 8040593e6b6f1dbd7dc751addb82ebbe 254 Pfam PF12706 Beta-lactamase superfamily domain 48 225 1.8E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07005 8040593e6b6f1dbd7dc751addb82ebbe 254 Gene3D G3DSA:3.60.15.10 1 253 1.6E-71 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS12405 cc4e1e462e6ab3284e6e818ce5570290 346 Pfam PF11927 Protein of unknown function (DUF3445) 56 292 1.4E-52 T 23-04-2016 IPR021848 Protein of unknown function DUF3445 MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 Pfam PF13545 Crp-like helix-turn-helix domain 151 216 5.2E-12 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 PANTHER PTHR24567 10 233 1.2E-54 T 23-04-2016 MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 Gene3D G3DSA:2.60.120.10 11 127 3.7E-5 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 SUPERFAMILY SSF51206 11 132 1.13E-8 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 SUPERFAMILY SSF46785 148 222 1.45E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 Gene3D G3DSA:1.10.10.10 148 218 3.3E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13345 bfeddd62da8ee33ff3241b70ea3d89e8 235 PANTHER PTHR24567:SF22 10 233 1.2E-54 T 23-04-2016 MSIP34_RS14695 1eaa10c6258fe99d2ad59dd79258c3f2 443 SUPERFAMILY SSF54106 3 47 1.96E-9 T 23-04-2016 IPR018392 LysM domain MSIP34_RS14695 1eaa10c6258fe99d2ad59dd79258c3f2 443 Gene3D G3DSA:3.10.350.10 3 48 3.3E-13 T 23-04-2016 IPR018392 LysM domain MSIP34_RS14695 1eaa10c6258fe99d2ad59dd79258c3f2 443 Pfam PF01476 LysM domain 5 46 1.9E-8 T 23-04-2016 IPR018392 LysM domain MSIP34_RS14695 1eaa10c6258fe99d2ad59dd79258c3f2 443 SMART SM00257 4 48 6.5E-12 T 23-04-2016 IPR018392 LysM domain MSIP34_RS14695 1eaa10c6258fe99d2ad59dd79258c3f2 443 Pfam PF11860 Protein of unknown function (DUF3380) 228 442 9.3E-59 T 23-04-2016 IPR024408 Domain of unknown function DUF3380 MSIP34_RS00590 1fe4882f82d8d0195d1be782e769d8da 767 SUPERFAMILY SSF56935 36 767 4.76E-93 T 23-04-2016 MSIP34_RS00590 1fe4882f82d8d0195d1be782e769d8da 767 PANTHER PTHR32552 9 767 1.0E-37 T 23-04-2016 MSIP34_RS00590 1fe4882f82d8d0195d1be782e769d8da 767 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 163 1.7E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00590 1fe4882f82d8d0195d1be782e769d8da 767 Gene3D G3DSA:2.40.170.20 177 767 3.0E-79 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00590 1fe4882f82d8d0195d1be782e769d8da 767 Gene3D G3DSA:2.170.130.10 37 176 1.3E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS00590 1fe4882f82d8d0195d1be782e769d8da 767 Pfam PF00593 TonB dependent receptor 510 765 5.8E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 Pfam PF00271 Helicase conserved C-terminal domain 241 347 1.5E-25 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 Gene3D G3DSA:3.40.50.300 228 381 5.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 161 169 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 SUPERFAMILY SSF52540 82 365 3.41E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 PANTHER PTHR24031 11 472 1.5E-188 T 23-04-2016 MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 Pfam PF00270 DEAD/DEAH box helicase 33 203 5.5E-49 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 SMART SM00487 28 230 5.3E-59 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 PANTHER PTHR24031:SF0 11 472 1.5E-188 T 23-04-2016 MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 Gene3D G3DSA:3.40.50.300 6 227 5.5E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 SMART SM00490 266 347 7.8E-30 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS05790 acecd5259b44cdaf46fc8c5b576394ee 538 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 9 529 49.791 T 23-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 PANTHER PTHR16254 414 557 5.5E-242 T 23-04-2016 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 PANTHER PTHR16254 1 398 5.5E-242 T 23-04-2016 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 SUPERFAMILY SSF51735 428 557 3.7E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 Pfam PF02254 TrkA-N domain 429 542 5.1E-24 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 Pfam PF00999 Sodium/hydrogen exchanger family 14 386 4.5E-73 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 PANTHER PTHR16254:SF17 414 557 5.5E-242 T 23-04-2016 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 PANTHER PTHR16254:SF17 1 398 5.5E-242 T 23-04-2016 MSIP34_RS13830 101ebec2f4a520a48af8edd83a2fca8e 563 Gene3D G3DSA:3.40.50.720 424 560 9.8E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09135 dd8e306dc67eadf1b4701d81fc4ddeaa 154 Gene3D G3DSA:3.40.30.10 1 153 1.1E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS09135 dd8e306dc67eadf1b4701d81fc4ddeaa 154 Pfam PF00578 AhpC/TSA family 5 132 1.5E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS09135 dd8e306dc67eadf1b4701d81fc4ddeaa 154 SUPERFAMILY SSF52833 1 153 1.76E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS09135 dd8e306dc67eadf1b4701d81fc4ddeaa 154 PANTHER PTHR10681 1 153 1.5E-46 T 23-04-2016 MSIP34_RS09135 dd8e306dc67eadf1b4701d81fc4ddeaa 154 PIRSF PIRSF000239 1 154 1.1E-26 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 SUPERFAMILY SSF54001 280 603 8.55E-73 T 23-04-2016 MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 Pfam PF11992 Domain of unknown function (DUF3488) 18 330 1.9E-107 T 23-04-2016 IPR021878 Protein of unknown function DUF3488 MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 PANTHER PTHR33490:SF4 18 651 6.0E-97 T 23-04-2016 MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 SMART SM00460 406 477 3.9E-26 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 Pfam PF01841 Transglutaminase-like superfamily 360 475 6.2E-26 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 Pfam PF13559 Domain of unknown function (DUF4129) 585 644 3.3E-9 T 23-04-2016 IPR025403 Domain of unknown function DUF4129 MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 Gene3D G3DSA:3.90.260.10 295 597 7.3E-59 T 23-04-2016 IPR002931 Transglutaminase-like MSIP34_RS04955 9c1c45b490f920bf3f93a9bf35a2f87f 653 PANTHER PTHR33490 18 651 6.0E-97 T 23-04-2016 MSIP34_RS04170 d53423f131b8a6ef266bc83eba538d00 201 PANTHER PTHR35147:SF2 12 201 3.1E-86 T 23-04-2016 MSIP34_RS04170 d53423f131b8a6ef266bc83eba538d00 201 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 16 173 29.432 T 23-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 MSIP34_RS04170 d53423f131b8a6ef266bc83eba538d00 201 SUPERFAMILY SSF64438 23 176 4.67E-51 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic MSIP34_RS04170 d53423f131b8a6ef266bc83eba538d00 201 Pfam PF03975 CheD chemotactic sensory transduction 64 169 5.4E-35 T 23-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 MSIP34_RS04170 d53423f131b8a6ef266bc83eba538d00 201 PANTHER PTHR35147 12 201 3.1E-86 T 23-04-2016 MSIP34_RS10045 24bafa09eba001e06e220e2099713ff0 539 Gene3D G3DSA:1.20.1600.10 122 529 2.8E-31 T 23-04-2016 MSIP34_RS10045 24bafa09eba001e06e220e2099713ff0 539 Pfam PF02321 Outer membrane efflux protein 129 323 8.3E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS10045 24bafa09eba001e06e220e2099713ff0 539 Pfam PF02321 Outer membrane efflux protein 343 527 8.8E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS10045 24bafa09eba001e06e220e2099713ff0 539 SUPERFAMILY SSF56954 127 530 1.57E-49 T 23-04-2016 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 SMART SM00564 133 165 0.071 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 SMART SM00564 179 216 24.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 SMART SM00564 81 114 82.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 SMART SM00564 520 551 0.0032 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 SUPERFAMILY SSF50998 30 236 4.71E-153 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 SUPERFAMILY SSF50998 271 613 4.71E-153 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 PANTHER PTHR32303 424 592 1.6E-184 T 23-04-2016 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 21 579 1.2E-191 T 23-04-2016 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 Gene3D G3DSA:2.140.10.10 34 597 5.4E-149 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 PANTHER PTHR32303 1 218 1.6E-184 T 23-04-2016 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 Pfam PF13360 PQQ-like domain 138 224 2.3E-8 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 Pfam PF01011 PQQ enzyme repeat 526 560 2.2E-5 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 PANTHER PTHR32303 269 391 1.6E-184 T 23-04-2016 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 294 315 - T 23-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 PANTHER PTHR32303:SF6 1 218 1.6E-184 T 23-04-2016 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 PANTHER PTHR32303:SF6 269 391 1.6E-184 T 23-04-2016 MSIP34_RS00075 94e6a619e5751a0660e6e5fa71ff8d8c 622 PANTHER PTHR32303:SF6 424 592 1.6E-184 T 23-04-2016 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PANTHER PTHR30381:SF1 1 374 9.7E-192 T 23-04-2016 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PANTHER PTHR30381 1 374 9.7E-192 T 23-04-2016 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 261 273 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 67 82 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 115 132 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 172 190 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 132 150 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 198 216 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 47 62 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 93 112 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 PRINTS PR01010 Flagellar P-ring protein signature 32 47 1.4E-82 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 Hamap MF_00416 Flagellar P-ring protein [flgI]. 9 374 37.939 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS03945 912498e77d5b2867121b64ea842e579a 374 Pfam PF02119 Flagellar P-ring protein 32 373 2.7E-139 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 MSIP34_RS12595 c6b054289086cab3d1d51f8123a7d922 210 Pfam PF04350 Pilus assembly protein, PilO 49 194 9.5E-57 T 23-04-2016 IPR007445 Pilus assembly protein, PilO MSIP34_RS12595 c6b054289086cab3d1d51f8123a7d922 210 Gene3D G3DSA:3.30.70.60 94 203 4.6E-38 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 MSIP34_RS12595 c6b054289086cab3d1d51f8123a7d922 210 PANTHER PTHR39555:SF1 1 206 3.9E-47 T 23-04-2016 MSIP34_RS12595 c6b054289086cab3d1d51f8123a7d922 210 PANTHER PTHR39555 1 206 3.9E-47 T 23-04-2016 MSIP34_RS12595 c6b054289086cab3d1d51f8123a7d922 210 PIRSF PIRSF016482 1 210 1.5E-62 T 23-04-2016 IPR007445 Pilus assembly protein, PilO MSIP34_RS12595 c6b054289086cab3d1d51f8123a7d922 210 Gene3D G3DSA:1.10.287.540 58 93 5.3E-19 T 23-04-2016 IPR023218 UPF0291 structural domain MSIP34_RS09915 760e9006090cf47c9d97ff9edbecfced 311 Gene3D G3DSA:3.40.1090.10 2 306 2.2E-93 T 23-04-2016 MSIP34_RS09915 760e9006090cf47c9d97ff9edbecfced 311 PANTHER PTHR32176 3 296 6.6E-50 T 23-04-2016 MSIP34_RS09915 760e9006090cf47c9d97ff9edbecfced 311 Pfam PF01734 Patatin-like phospholipase 5 189 1.4E-18 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 MSIP34_RS09915 760e9006090cf47c9d97ff9edbecfced 311 SUPERFAMILY SSF52151 1 298 2.12E-57 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 SUPERFAMILY SSF51735 2 306 5.1E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 PANTHER PTHR10366:SF39 1 306 8.5E-102 T 23-04-2016 MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 Gene3D G3DSA:3.40.50.720 2 153 1.0E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 PANTHER PTHR10366 1 306 8.5E-102 T 23-04-2016 MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 1.8E-49 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 Gene3D G3DSA:3.90.25.10 238 307 4.8E-46 T 23-04-2016 MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 Gene3D G3DSA:3.90.25.10 154 206 4.8E-46 T 23-04-2016 MSIP34_RS09205 758aa51b7f6437b494ec8116365a81b3 312 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 307 4.0E-125 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 MSIP34_RS07335 73b46f5874a5c577c1dea48d008ffa92 146 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 143 9.6E-36 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein MSIP34_RS07335 73b46f5874a5c577c1dea48d008ffa92 146 Gene3D G3DSA:3.30.479.10 1 143 3.8E-40 T 23-04-2016 MSIP34_RS07335 73b46f5874a5c577c1dea48d008ffa92 146 PIRSF PIRSF006113 1 145 1.4E-19 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein MSIP34_RS07335 73b46f5874a5c577c1dea48d008ffa92 146 SUPERFAMILY SSF55620 1 144 2.56E-38 T 23-04-2016 MSIP34_RS07335 73b46f5874a5c577c1dea48d008ffa92 146 PANTHER PTHR12589 1 142 7.2E-31 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein MSIP34_RS07335 73b46f5874a5c577c1dea48d008ffa92 146 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 115 2.8E-29 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 SUPERFAMILY SSF46894 192 260 8.16E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 ProSitePatterns PS00622 LuxR-type HTH domain signature. 218 245 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 TIGRFAM TIGR03020 EpsA: transcriptional regulator EpsA 7 260 2.4E-109 T 23-04-2016 IPR017470 Transcription regulator EpsA MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 PANTHER PTHR26402 181 255 6.0E-15 T 23-04-2016 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 SMART SM00421 201 258 7.2E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 PANTHER PTHR26402:SF151 181 255 6.0E-15 T 23-04-2016 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 Gene3D G3DSA:1.10.10.10 203 257 4.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 234 246 2.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 218 234 2.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 204 218 2.4E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS09310 a7ee9157e61c345157fe5d57a7c084f7 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 203 256 3.2E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS14030 ba7c775ad3699b68d0c36f97ddd4b5d5 50 Pfam PF00301 Rubredoxin 1 45 5.4E-20 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 MSIP34_RS14030 ba7c775ad3699b68d0c36f97ddd4b5d5 50 ProSitePatterns PS00202 Rubredoxin signature. 29 39 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 MSIP34_RS14030 ba7c775ad3699b68d0c36f97ddd4b5d5 50 Gene3D G3DSA:2.20.28.10 1 49 7.5E-23 T 23-04-2016 IPR004039 Rubredoxin-type fold MSIP34_RS14030 ba7c775ad3699b68d0c36f97ddd4b5d5 50 SUPERFAMILY SSF57802 1 49 1.85E-19 T 23-04-2016 MSIP34_RS14030 ba7c775ad3699b68d0c36f97ddd4b5d5 50 PIRSF PIRSF000071 1 50 1.8E-22 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 MSIP34_RS03895 5959f6a3d5f78d0010f05729a0a288db 169 Pfam PF03748 Flagellar basal body-associated protein FliL 69 169 1.4E-25 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 MSIP34_RS03895 5959f6a3d5f78d0010f05729a0a288db 169 PANTHER PTHR35091:SF1 2 169 1.1E-43 T 23-04-2016 MSIP34_RS03895 5959f6a3d5f78d0010f05729a0a288db 169 PANTHER PTHR35091 2 169 1.1E-43 T 23-04-2016 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 PANTHER PTHR23083 19 178 1.9E-33 T 23-04-2016 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 372 403 4.5E-5 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 Pfam PF13374 Tetratricopeptide repeat 123 146 0.0065 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 Gene3D G3DSA:1.25.40.10 16 175 9.4E-43 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 Gene3D G3DSA:3.40.50.2000 372 436 4.1E-10 T 23-04-2016 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 Pfam PF13414 TPR repeat 26 65 2.0E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SUPERFAMILY SSF53756 201 440 2.35E-22 T 23-04-2016 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SMART SM00028 17 50 6.0E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SMART SM00028 51 84 0.001 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SMART SM00028 119 152 0.0018 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SMART SM00028 85 118 14.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SMART SM00028 195 228 480.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS04520 13dec844690a6e0cf3b6523323b42ec6 463 SUPERFAMILY SSF48452 18 177 2.28E-33 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS09215 78e033e689f93553f690f8ad5667870d 247 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 65 234 4.6E-35 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 MSIP34_RS09215 78e033e689f93553f690f8ad5667870d 247 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 68 232 1.2E-50 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 MSIP34_RS09215 78e033e689f93553f690f8ad5667870d 247 PANTHER PTHR34136 5 240 7.8E-63 T 23-04-2016 MSIP34_RS09215 78e033e689f93553f690f8ad5667870d 247 PANTHER PTHR34136:SF1 5 240 7.8E-63 T 23-04-2016 MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 Gene3D G3DSA:3.40.190.10 92 175 2.3E-18 T 23-04-2016 MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 Pfam PF03466 LysR substrate binding domain 88 295 8.6E-36 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 SUPERFAMILY SSF46785 4 87 4.84E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 Gene3D G3DSA:1.10.10.10 3 80 1.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 PANTHER PTHR30537:SF5 1 306 1.8E-105 T 23-04-2016 MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.8E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 SUPERFAMILY SSF53850 89 298 3.44E-39 T 23-04-2016 MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 Gene3D G3DSA:3.40.190.10 176 263 1.5E-16 T 23-04-2016 MSIP34_RS11840 71af7250106079b9e351a28bd8d8f336 307 PANTHER PTHR30537 1 306 1.8E-105 T 23-04-2016 MSIP34_RS07705 6e79b09a16d11bbc77ff32acc4abbef3 498 PANTHER PTHR30121:SF3 17 440 6.5E-172 T 23-04-2016 MSIP34_RS07705 6e79b09a16d11bbc77ff32acc4abbef3 498 PANTHER PTHR30121 17 440 6.5E-172 T 23-04-2016 MSIP34_RS07705 6e79b09a16d11bbc77ff32acc4abbef3 498 Pfam PF05872 Bacterial protein of unknown function (DUF853) 7 497 1.2E-231 T 23-04-2016 IPR033186 Helicase HerA-like C-terminal MSIP34_RS07705 6e79b09a16d11bbc77ff32acc4abbef3 498 Gene3D G3DSA:3.40.50.300 203 379 2.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07705 6e79b09a16d11bbc77ff32acc4abbef3 498 Gene3D G3DSA:3.40.50.300 9 107 2.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS07705 6e79b09a16d11bbc77ff32acc4abbef3 498 SUPERFAMILY SSF52540 17 381 5.36E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS13475 01756c143606b9b8992cd1f55254eb70 241 SUPERFAMILY SSF52949 37 151 4.12E-12 T 23-04-2016 MSIP34_RS13475 01756c143606b9b8992cd1f55254eb70 241 Gene3D G3DSA:3.40.220.10 37 155 8.5E-12 T 23-04-2016 MSIP34_RS13475 01756c143606b9b8992cd1f55254eb70 241 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 64 157 3.8E-10 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 MSIP34_RS07490 0b056c3c66970a69af10b78224ca4669 134 Pfam PF07120 Protein of unknown function (DUF1376) 10 94 2.3E-20 T 23-04-2016 IPR010781 Protein of unknown function DUF1376 MSIP34_RS07195 10674df3f878a8b6135de5a491fa86da 91 Pfam PF05899 Protein of unknown function (DUF861) 16 88 1.1E-25 T 23-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 MSIP34_RS07195 10674df3f878a8b6135de5a491fa86da 91 PANTHER PTHR33271 4 89 5.2E-36 T 23-04-2016 MSIP34_RS07195 10674df3f878a8b6135de5a491fa86da 91 Gene3D G3DSA:2.60.120.10 3 88 5.6E-29 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS07195 10674df3f878a8b6135de5a491fa86da 91 SUPERFAMILY SSF51182 14 88 7.23E-15 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 8.7E-7 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 8.7E-7 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 8.7E-7 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 PANTHER PTHR33154:SF5 1 101 1.4E-21 T 23-04-2016 MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 Gene3D G3DSA:1.10.10.10 2 96 1.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 SUPERFAMILY SSF46785 4 93 1.77E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 PANTHER PTHR33154 1 101 1.4E-21 T 23-04-2016 MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 SMART SM00418 8 89 6.8E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS05860 eecfe1ce8009935458eb6dc7639ba12b 107 Pfam PF12840 Helix-turn-helix domain 9 69 1.5E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 Pfam PF01478 Type IV leader peptidase family 142 250 6.2E-27 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PANTHER PTHR30487 7 43 1.2E-107 T 23-04-2016 MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PANTHER PTHR30487 64 290 1.2E-107 T 23-04-2016 MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PANTHER PTHR30487:SF0 7 43 1.2E-107 T 23-04-2016 MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PANTHER PTHR30487:SF0 64 290 1.2E-107 T 23-04-2016 MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 218 229 1.1E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 207 217 1.1E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 150 167 1.1E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 230 245 1.1E-28 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS02595 3d3cce1bcffe027a0bf85687c2861821 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 25 130 1.1E-33 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 SUPERFAMILY SSF46911 4 75 5.49E-29 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 2.2E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 2.2E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 2.2E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 2.2E-18 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 22 71 4.0E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 PANTHER PTHR13479 1 75 3.8E-30 T 23-04-2016 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 Pfam PF01084 Ribosomal protein S18 19 69 1.3E-25 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 74 2.9E-34 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 74 21.793 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 Gene3D G3DSA:4.10.640.10 9 75 8.0E-33 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07280 17dbc0391b0de129f82c9950dc78b7ab 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 22 45 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11800 315e51be624983156a19b8ae37f5db75 168 Gene3D G3DSA:1.10.760.10 57 162 7.6E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11800 315e51be624983156a19b8ae37f5db75 168 SUPERFAMILY SSF46626 13 162 3.7E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11800 315e51be624983156a19b8ae37f5db75 168 Pfam PF00034 Cytochrome c 73 160 4.0E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11800 315e51be624983156a19b8ae37f5db75 168 PIRSF PIRSF000008 7 165 3.6E-29 T 23-04-2016 IPR009153 Cytochrome cL GO:0005506|GO:0009055|GO:0020037|GO:0042597 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 SUPERFAMILY SSF53850 26 253 5.37E-47 T 23-04-2016 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 PANTHER PTHR30024:SF1 1 263 6.2E-43 T 23-04-2016 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 Gene3D G3DSA:3.40.190.10 112 238 2.2E-21 T 23-04-2016 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 Pfam PF13379 NMT1-like family 24 258 1.8E-29 T 23-04-2016 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 PANTHER PTHR30024 1 263 6.2E-43 T 23-04-2016 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 328 4.1E-49 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 MSIP34_RS13250 7dc26f756ec72880acc404e059e740bc 336 Gene3D G3DSA:3.40.190.10 45 111 6.4E-4 T 23-04-2016 MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 SUPERFAMILY SSF53335 27 204 1.48E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 Gene3D G3DSA:3.40.50.150 2 205 1.1E-68 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 Pfam PF01728 FtsJ-like methyltransferase 28 203 2.9E-57 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 PANTHER PTHR10920:SF20 1 205 6.8E-101 T 23-04-2016 MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 PANTHER PTHR10920 1 205 6.8E-101 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 30.458 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 MSIP34_RS09480 2c6a16a432402ca2f472cc9b8002f187 207 PIRSF PIRSF005461 1 207 2.5E-76 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 Gene3D G3DSA:1.20.1510.10 45 234 4.9E-56 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 PANTHER PTHR11562:SF17 3 320 4.6E-101 T 23-04-2016 MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 47 313 3.6E-81 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 SUPERFAMILY SSF161111 42 235 7.85E-54 T 23-04-2016 MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 PANTHER PTHR11562 3 320 4.6E-101 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 Pfam PF01545 Cation efflux family 48 234 4.6E-46 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 MSIP34_RS05105 066ee80eb80a5d0cc0845899ec58eb74 333 SUPERFAMILY SSF160240 240 311 1.12E-9 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 PANTHER PTHR32089:SF63 561 829 4.2E-140 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 PANTHER PTHR32089:SF63 96 245 4.2E-140 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 PANTHER PTHR32089 561 829 4.2E-140 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 PANTHER PTHR32089 96 245 4.2E-140 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 SUPERFAMILY SSF58104 467 490 1.19E-68 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 SUPERFAMILY SSF58104 599 826 1.19E-68 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 SMART SM00283 579 826 3.8E-93 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 177 1.3E-17 T 23-04-2016 IPR024478 4HB MCP domain MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 Gene3D G3DSA:1.10.287.950 593 797 1.2E-61 T 23-04-2016 MSIP34_RS04160 bc76c15c509cbe2463cef834e42e575a 875 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 633 825 2.8E-61 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS03995 55608fd270d9a836e384d889efa9bada 152 SUPERFAMILY SSF140566 7 125 1.44E-21 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 MSIP34_RS03995 55608fd270d9a836e384d889efa9bada 152 Gene3D G3DSA:1.20.58.300 6 125 5.4E-27 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 MSIP34_RS03995 55608fd270d9a836e384d889efa9bada 152 Pfam PF05130 FlgN protein 7 142 1.6E-27 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 PANTHER PTHR33516:SF1 5 141 6.6E-37 T 23-04-2016 MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 Gene3D G3DSA:2.10.109.10 28 140 5.8E-44 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 54 64 9.0E-7 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 65 76 9.0E-7 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 93 105 9.0E-7 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 PANTHER PTHR33516 5 141 6.6E-37 T 23-04-2016 MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 Pfam PF00717 Peptidase S24-like 57 123 9.6E-12 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS07555 be6ffd186faa47ede0736c99e269280f 142 SUPERFAMILY SSF51306 25 138 4.19E-32 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS08660 692142c3718dcac045b5e246e892cc67 268 Pfam PF13525 Outer membrane lipoprotein 33 234 1.7E-68 T 23-04-2016 MSIP34_RS08660 692142c3718dcac045b5e246e892cc67 268 SUPERFAMILY SSF48452 32 116 1.24E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS08660 692142c3718dcac045b5e246e892cc67 268 PANTHER PTHR37423 5 256 2.9E-80 T 23-04-2016 MSIP34_RS08660 692142c3718dcac045b5e246e892cc67 268 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 4 247 5.4E-87 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD MSIP34_RS08660 692142c3718dcac045b5e246e892cc67 268 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 243 43.103 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD MSIP34_RS08660 692142c3718dcac045b5e246e892cc67 268 Gene3D G3DSA:1.25.40.10 33 120 1.2E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 Pfam PF17152 Periplasmic sensor domain 42 143 1.4E-26 T 23-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 Pfam PF00990 Diguanylate cyclase, GGDEF domain 246 402 7.9E-48 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 PANTHER PTHR10799:SF774 133 403 1.3E-45 T 23-04-2016 MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 PANTHER PTHR10799 133 403 1.3E-45 T 23-04-2016 MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 SMART SM00267 235 408 6.8E-61 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 243 404 2.5E-47 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 SUPERFAMILY SSF55073 251 406 4.63E-47 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS02025 1dc80a6099a89de72e9662e72bf8657e 409 Gene3D G3DSA:3.30.70.270 247 407 6.2E-55 T 23-04-2016 MSIP34_RS09970 db161b131d0e803f556985d794fe7039 566 PANTHER PTHR30462 23 491 2.2E-87 T 23-04-2016 MSIP34_RS09970 db161b131d0e803f556985d794fe7039 566 Pfam PF02470 MlaD protein 291 398 9.7E-15 T 23-04-2016 IPR003399 Mce/MlaD MSIP34_RS09970 db161b131d0e803f556985d794fe7039 566 Pfam PF02470 MlaD protein 49 140 7.8E-13 T 23-04-2016 IPR003399 Mce/MlaD MSIP34_RS09970 db161b131d0e803f556985d794fe7039 566 Pfam PF02470 MlaD protein 166 224 1.5E-7 T 23-04-2016 IPR003399 Mce/MlaD MSIP34_RS09970 db161b131d0e803f556985d794fe7039 566 PANTHER PTHR30462:SF2 23 491 2.2E-87 T 23-04-2016 MSIP34_RS02070 905711591d213cab811ed43352867ee1 473 PANTHER PTHR33121:SF13 198 454 6.6E-88 T 23-04-2016 MSIP34_RS02070 905711591d213cab811ed43352867ee1 473 Pfam PF00563 EAL domain 210 444 1.4E-73 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02070 905711591d213cab811ed43352867ee1 473 Gene3D G3DSA:3.20.20.450 207 454 1.7E-95 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02070 905711591d213cab811ed43352867ee1 473 PANTHER PTHR33121 198 454 6.6E-88 T 23-04-2016 MSIP34_RS02070 905711591d213cab811ed43352867ee1 473 SMART SM00052 203 449 2.9E-109 T 23-04-2016 IPR001633 EAL domain MSIP34_RS02070 905711591d213cab811ed43352867ee1 473 SUPERFAMILY SSF141868 210 454 3.66E-89 T 23-04-2016 IPR001633 EAL domain MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 Gene3D G3DSA:3.20.20.70 28 101 4.1E-13 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 PIRSF PIRSF000370 1 212 3.7E-68 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 PANTHER PTHR11228:SF6 1 208 2.9E-58 T 23-04-2016 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 Pfam PF13394 4Fe-4S single cluster domain 24 105 6.2E-11 T 23-04-2016 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 PANTHER PTHR11228 1 208 2.9E-58 T 23-04-2016 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 209 36.465 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 211 3.4E-112 T 23-04-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 Pfam PF04055 Radical SAM superfamily 26 103 2.6E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS12050 4e1f2f87b8a0543362d8f8a60e4414bb 212 SUPERFAMILY SSF102114 24 102 9.81E-14 T 23-04-2016 MSIP34_RS13565 a1ab342d30cebb14c919896ff0e50ef8 169 Gene3D G3DSA:2.40.50.180 59 97 1.3E-7 T 23-04-2016 MSIP34_RS13565 a1ab342d30cebb14c919896ff0e50ef8 169 Gene3D G3DSA:2.30.30.40 102 152 5.1E-6 T 23-04-2016 MSIP34_RS13565 a1ab342d30cebb14c919896ff0e50ef8 169 PANTHER PTHR22617 18 166 1.4E-45 T 23-04-2016 MSIP34_RS13565 a1ab342d30cebb14c919896ff0e50ef8 169 SUPERFAMILY SSF50341 16 162 4.84E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13565 a1ab342d30cebb14c919896ff0e50ef8 169 SMART SM00260 17 158 3.8E-34 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13565 a1ab342d30cebb14c919896ff0e50ef8 169 Pfam PF01584 CheW-like domain 21 160 3.1E-36 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS05750 83d123e5e02b8a48dd325532129c37aa 171 SUPERFAMILY SSF47473 40 92 1.04E-6 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05750 83d123e5e02b8a48dd325532129c37aa 171 Gene3D G3DSA:1.10.238.10 39 97 7.8E-5 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05750 83d123e5e02b8a48dd325532129c37aa 171 Pfam PF04972 BON domain 103 170 1.1E-20 T 23-04-2016 IPR007055 BON domain MSIP34_RS05750 83d123e5e02b8a48dd325532129c37aa 171 SMART SM00749 108 171 2.3E-9 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS05750 83d123e5e02b8a48dd325532129c37aa 171 PANTHER PTHR34606 96 170 8.5E-20 T 23-04-2016 MSIP34_RS05750 83d123e5e02b8a48dd325532129c37aa 171 ProSitePatterns PS00018 EF-hand calcium-binding domain. 74 86 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS13115 265e0ebd4df095bbd5f1617f8c019a6a 272 PANTHER PTHR30622 2 266 4.3E-125 T 23-04-2016 MSIP34_RS13115 265e0ebd4df095bbd5f1617f8c019a6a 272 Pfam PF02673 Bacitracin resistance protein BacA 9 262 1.5E-80 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MSIP34_RS13115 265e0ebd4df095bbd5f1617f8c019a6a 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 268 17.92 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MSIP34_RS13115 265e0ebd4df095bbd5f1617f8c019a6a 272 PANTHER PTHR30622:SF3 2 266 4.3E-125 T 23-04-2016 MSIP34_RS13115 265e0ebd4df095bbd5f1617f8c019a6a 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 261 1.9E-75 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 Gene3D G3DSA:2.40.50.100 173 207 2.7E-13 T 23-04-2016 MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 Gene3D G3DSA:2.40.50.100 68 99 2.7E-13 T 23-04-2016 MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 PANTHER PTHR30469 1 360 4.2E-59 T 23-04-2016 MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 359 2.5E-61 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 SUPERFAMILY SSF111369 55 281 1.83E-23 T 23-04-2016 MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 279 4.6E-19 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS09870 464cda30c3b415c1f46c6c84f0e028e3 361 PANTHER PTHR30469:SF15 1 360 4.2E-59 T 23-04-2016 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 Gene3D G3DSA:3.90.20.20 23 115 1.2E-24 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 SUPERFAMILY SSF51064 117 172 5.36E-18 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 Pfam PF01025 GrpE 15 171 8.4E-47 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 Hamap MF_01151 Protein GrpE [grpE]. 2 171 19.375 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 SUPERFAMILY SSF58014 24 115 1.06E-21 T 23-04-2016 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 PANTHER PTHR21237 2 174 2.4E-53 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 ProSitePatterns PS01071 grpE protein signature. 127 169 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 Gene3D G3DSA:2.30.22.10 117 173 6.3E-25 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 PRINTS PR00773 GrpE protein signature 72 87 4.3E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 PRINTS PR00773 GrpE protein signature 124 139 4.3E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 PRINTS PR00773 GrpE protein signature 44 60 4.3E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS09640 d5eccc8aa7cc1e0610201d81021744b8 174 PRINTS PR00773 GrpE protein signature 150 169 4.3E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 MSIP34_RS13815 424f549a8e7828596cab013dbbe490d3 247 Gene3D G3DSA:3.40.50.1820 5 246 1.7E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS13815 424f549a8e7828596cab013dbbe490d3 247 SUPERFAMILY SSF53474 5 244 1.5E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS13815 424f549a8e7828596cab013dbbe490d3 247 PANTHER PTHR17630:SF38 14 245 7.4E-67 T 23-04-2016 MSIP34_RS13815 424f549a8e7828596cab013dbbe490d3 247 PANTHER PTHR17630 14 245 7.4E-67 T 23-04-2016 MSIP34_RS13815 424f549a8e7828596cab013dbbe490d3 247 Pfam PF01738 Dienelactone hydrolase family 17 242 1.4E-28 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 SUPERFAMILY SSF58104 594 868 7.46E-71 T 23-04-2016 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 PANTHER PTHR32089:SF63 70 248 5.0E-142 T 23-04-2016 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 PANTHER PTHR32089:SF63 601 869 5.0E-142 T 23-04-2016 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 179 1.9E-24 T 23-04-2016 IPR024478 4HB MCP domain MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 673 865 2.7E-61 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 Gene3D G3DSA:1.10.287.950 633 837 1.4E-61 T 23-04-2016 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 SUPERFAMILY SSF55785 445 556 3.14E-5 T 23-04-2016 IPR000014 PAS domain MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 Gene3D G3DSA:3.30.450.20 451 532 2.5E-5 T 23-04-2016 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 SMART SM00283 619 866 1.4E-94 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 PANTHER PTHR32089 70 248 5.0E-142 T 23-04-2016 MSIP34_RS04150 f1e3f8dfc8d85204465811ba772d727e 921 PANTHER PTHR32089 601 869 5.0E-142 T 23-04-2016 MSIP34_RS14145 469a9b1d68f1b5042df3162ac8553c4b 123 Pfam PF03899 ATP synthase I chain 7 103 5.2E-12 T 23-04-2016 IPR005598 ATP synthase protein I MSIP34_RS11160 12c48d236d499f5d3782e5ed966426f4 344 Pfam PF04338 Protein of unknown function, DUF481 135 344 3.2E-46 T 23-04-2016 IPR007433 Protein of unknown function DUF481 MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 Pfam PF02254 TrkA-N domain 407 518 1.4E-24 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 18 290 9.6E-82 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 SUPERFAMILY SSF51735 407 533 3.52E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 Pfam PF00999 Sodium/hydrogen exchanger family 16 379 1.7E-63 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 Gene3D G3DSA:3.40.50.720 404 535 2.2E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 PANTHER PTHR16254:SF6 9 560 2.4E-210 T 23-04-2016 MSIP34_RS12130 1f66b591554ae86e20197e597b22e501 615 PANTHER PTHR16254 9 560 2.4E-210 T 23-04-2016 MSIP34_RS00310 29ecd708c5740cdd63cc757d8af155a3 134 Pfam PF04519 Polymer-forming cytoskeletal 15 115 7.1E-26 T 23-04-2016 IPR007607 Protein of unknown function DUF583 MSIP34_RS00310 29ecd708c5740cdd63cc757d8af155a3 134 PANTHER PTHR35024:SF2 1 114 1.9E-23 T 23-04-2016 MSIP34_RS00310 29ecd708c5740cdd63cc757d8af155a3 134 PANTHER PTHR35024 1 114 1.9E-23 T 23-04-2016 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 PANTHER PTHR23083:SF195 104 564 9.9E-49 T 23-04-2016 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SUPERFAMILY SSF48452 391 559 4.88E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 492 525 8.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 252 285 130.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 389 422 150.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 457 491 46.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 423 456 49.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 185 218 44.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SMART SM00028 526 558 5.3 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 Gene3D G3DSA:1.25.40.10 354 559 1.9E-34 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 Gene3D G3DSA:1.25.40.10 101 346 1.7E-24 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 SUPERFAMILY SSF48452 109 376 5.5E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 Pfam PF13432 Tetratricopeptide repeat 297 348 3.3E-4 T 23-04-2016 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 Pfam PF13432 Tetratricopeptide repeat 499 558 2.4E-6 T 23-04-2016 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 Pfam PF14559 Tetratricopeptide repeat 401 462 3.0E-7 T 23-04-2016 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 Pfam PF14559 Tetratricopeptide repeat 231 288 1.0E-7 T 23-04-2016 MSIP34_RS10135 be7e3b6d4c454ac8cafb07885cff1289 570 PANTHER PTHR23083 104 564 9.9E-49 T 23-04-2016 MSIP34_RS08055 31f1f4ebd5fe7a34f59bd1154c51ef9a 231 SUPERFAMILY SSF56281 4 222 9.94E-54 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS08055 31f1f4ebd5fe7a34f59bd1154c51ef9a 231 Gene3D G3DSA:3.60.15.10 2 221 1.3E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS08055 31f1f4ebd5fe7a34f59bd1154c51ef9a 231 PANTHER PTHR11935:SF113 1 221 1.7E-73 T 23-04-2016 MSIP34_RS08055 31f1f4ebd5fe7a34f59bd1154c51ef9a 231 SMART SM00849 11 168 1.0E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS08055 31f1f4ebd5fe7a34f59bd1154c51ef9a 231 Pfam PF00753 Metallo-beta-lactamase superfamily 11 168 1.3E-15 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS08055 31f1f4ebd5fe7a34f59bd1154c51ef9a 231 PANTHER PTHR11935 1 221 1.7E-73 T 23-04-2016 MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 PIRSF PIRSF004555 2 103 8.1E-36 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 95 22.695 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 SUPERFAMILY SSF82607 6 95 8.11E-34 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 PANTHER PTHR33449 1 103 4.3E-41 T 23-04-2016 MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 PANTHER PTHR33449:SF1 1 103 4.3E-41 T 23-04-2016 MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 99 6.0E-32 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 Gene3D G3DSA:3.30.1310.10 1 102 2.2E-43 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family MSIP34_RS08495 9d93756f1008f2ad7ba34a5c87f02aa4 103 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 4.0E-35 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PANTHER PTHR11652 1 116 1.7E-75 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.3E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.3E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.3E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.3E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.3E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.3E-60 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 4.4E-70 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 Pfam PF00164 Ribosomal protein S12/S23 3 123 4.1E-43 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 Gene3D G3DSA:2.40.50.140 1 123 1.4E-65 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.977 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 SUPERFAMILY SSF50249 2 123 1.54E-52 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01555 94cf262d0d3c8d510d556e93fde4a770 125 PIRSF PIRSF002133 1 124 5.0E-55 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 PANTHER PTHR36306:SF1 7 553 3.0E-121 T 23-04-2016 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 SUPERFAMILY SSF88713 190 461 1.83E-90 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 SUPERFAMILY SSF88713 7 94 1.83E-90 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 SUPERFAMILY SSF88713 145 163 1.83E-90 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 Pfam PF03065 Glycosyl hydrolase family 57 12 473 9.9E-70 T 23-04-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 PANTHER PTHR36306 7 553 3.0E-121 T 23-04-2016 MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 Gene3D G3DSA:3.20.110.10 6 71 4.1E-86 T 23-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain MSIP34_RS06485 17d899ae1ac788cd8757773ce25a921a 572 Gene3D G3DSA:3.20.110.10 148 461 4.1E-86 T 23-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain MSIP34_RS08890 b5434f6bb4d222786044baaa7c2cbff2 386 PANTHER PTHR40252 28 386 3.8E-62 T 23-04-2016 MSIP34_RS08890 b5434f6bb4d222786044baaa7c2cbff2 386 PANTHER PTHR40252:SF1 28 386 3.8E-62 T 23-04-2016 MSIP34_RS08890 b5434f6bb4d222786044baaa7c2cbff2 386 Pfam PF10442 FIST C domain 218 361 2.2E-26 T 23-04-2016 IPR019494 FIST, C-domain MSIP34_RS08890 b5434f6bb4d222786044baaa7c2cbff2 386 SMART SM00897 25 217 3.6E-50 T 23-04-2016 IPR013702 FIST domain, N-terminal MSIP34_RS08890 b5434f6bb4d222786044baaa7c2cbff2 386 Pfam PF08495 FIST N domain 27 216 1.8E-38 T 23-04-2016 IPR013702 FIST domain, N-terminal MSIP34_RS08890 b5434f6bb4d222786044baaa7c2cbff2 386 SMART SM01204 218 362 2.9E-39 T 23-04-2016 IPR019494 FIST, C-domain MSIP34_RS12260 9c7675a0a193fed53690b2c16d18e9a5 312 Pfam PF00781 Diacylglycerol kinase catalytic domain 11 134 1.9E-22 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 MSIP34_RS12260 9c7675a0a193fed53690b2c16d18e9a5 312 SUPERFAMILY SSF111331 10 309 3.05E-54 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain MSIP34_RS12260 9c7675a0a193fed53690b2c16d18e9a5 312 SMART SM00046 10 139 0.0017 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 MSIP34_RS12260 9c7675a0a193fed53690b2c16d18e9a5 312 PANTHER PTHR12358 11 306 1.0E-23 T 23-04-2016 MSIP34_RS04055 e225887f2a45f4925ecb0b0a345e2b80 258 Pfam PF13847 Methyltransferase domain 130 228 1.4E-6 T 23-04-2016 IPR025714 Methyltransferase domain MSIP34_RS04055 e225887f2a45f4925ecb0b0a345e2b80 258 Gene3D G3DSA:3.40.50.150 103 235 8.6E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04055 e225887f2a45f4925ecb0b0a345e2b80 258 PANTHER PTHR13610:SF9 93 256 6.1E-22 T 23-04-2016 MSIP34_RS04055 e225887f2a45f4925ecb0b0a345e2b80 258 PANTHER PTHR13610 93 256 6.1E-22 T 23-04-2016 IPR026170 FAM173 family MSIP34_RS04055 e225887f2a45f4925ecb0b0a345e2b80 258 SUPERFAMILY SSF53335 102 239 1.3E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 4 375 1.2E-113 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 Gene3D G3DSA:3.40.50.2000 158 351 6.0E-7 T 23-04-2016 MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 SUPERFAMILY SSF53756 4 372 1.26E-32 T 23-04-2016 MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 PANTHER PTHR30372:SF0 3 377 3.9E-113 T 23-04-2016 MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 378 39.256 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 PANTHER PTHR30372 3 377 3.9E-113 T 23-04-2016 MSIP34_RS07105 b94c3a646463fcbb713a240d9d69e83d 378 Pfam PF02684 Lipid-A-disaccharide synthetase 4 373 1.3E-108 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 2.8E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 245 259 2.8E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 2.8E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 96 2.8E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 SUPERFAMILY SSF53474 32 299 1.5E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 PANTHER PTHR10992 18 301 3.5E-35 T 23-04-2016 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 PANTHER PTHR10992:SF878 18 301 3.5E-35 T 23-04-2016 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 Pfam PF00561 alpha/beta hydrolase fold 56 285 2.3E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS05690 0a1b039e99741b508027b98e17a303fc 301 Gene3D G3DSA:3.40.50.1820 33 299 8.3E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PANTHER PTHR22773 1 486 3.9E-206 T 23-04-2016 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 70 125 4.3E-5 T 23-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PANTHER PTHR22773:SF40 1 486 3.9E-206 T 23-04-2016 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 376 402 1.3E-46 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 1.3E-46 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 1.3E-46 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 1.3E-46 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 324 343 1.3E-46 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 Pfam PF00361 Proton-conducting membrane transporter 132 417 6.5E-80 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 MSIP34_RS03490 e403f37f72f8b7a211bdca9a98208b9f 492 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 485 1.3E-187 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 PANTHER PTHR11609 1 370 8.6E-121 T 23-04-2016 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 PANTHER PTHR11609:SF5 1 370 8.6E-121 T 23-04-2016 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 SUPERFAMILY SSF52440 16 109 8.92E-24 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 Gene3D G3DSA:3.30.1490.20 128 190 1.8E-17 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 17 367 40.131 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 SUPERFAMILY SSF56059 114 308 9.55E-59 T 23-04-2016 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 SUPERFAMILY SSF51246 312 372 9.42E-15 T 23-04-2016 IPR011054 Rudiment single hybrid motif MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 18 368 2.9E-115 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 Pfam PF02222 ATP-grasp domain 123 289 1.4E-50 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 Gene3D G3DSA:3.40.50.20 13 121 2.5E-29 T 23-04-2016 IPR016185 Pre-ATP-grasp domain MSIP34_RS02635 f1890177bbd0d181d37c70bf80ef806f 385 Gene3D G3DSA:3.30.470.20 191 379 1.2E-64 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS08640 59cd3c99f702cda1e469183b5fae8dca 226 Pfam PF07589 PEP-CTERM motif 194 218 1.6E-7 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS08640 59cd3c99f702cda1e469183b5fae8dca 226 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 195 220 3.9E-5 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 PANTHER PTHR34990 1 245 5.5E-93 T 23-04-2016 MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 PANTHER PTHR34990:SF1 1 245 5.5E-93 T 23-04-2016 MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 251 108.727 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 Gene3D G3DSA:3.60.21.10 185 216 3.1E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 Gene3D G3DSA:3.60.21.10 15 137 3.1E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 14 245 1.8E-88 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 SUPERFAMILY SSF56300 15 234 1.17E-23 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS11335 8f9e6e6e91ce310065a7e31cd4d002bc 251 Pfam PF00149 Calcineurin-like phosphoesterase 15 212 9.9E-6 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 265 4.0E-42 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 SUPERFAMILY SSF51735 237 267 6.36E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 SUPERFAMILY SSF51735 4 127 6.36E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 PANTHER PTHR20836 4 267 1.1E-87 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 126 9.9E-37 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 SUPERFAMILY SSF55347 128 237 1.96E-37 T 23-04-2016 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 PIRSF PIRSF000161 2 268 7.3E-84 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 265 2.7E-92 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 34.434 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS09510 2b7148734b7b4b000db44a917bc6dd5c 268 Gene3D G3DSA:3.40.50.720 1 164 3.5E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07685 f1d872340aa242c32eef18c6731f2603 268 TIGRFAM TIGR03122 one_C_dehyd_C: formylmethanofuran dehydrogenase subunit C 4 266 1.4E-78 T 23-04-2016 IPR017550 Formylmethanofuran dehydrogenase subunit C GO:0015948|GO:0018493|GO:0046914|GO:0055114 KEGG: 00680+1.2.99.5|MetaCyc: PWY-5209|UniPathway: UPA00640 MSIP34_RS07685 f1d872340aa242c32eef18c6731f2603 268 Gene3D G3DSA:2.160.20.60 34 212 9.5E-41 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS07685 f1d872340aa242c32eef18c6731f2603 268 SUPERFAMILY SSF69336 15 213 5.49E-44 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS07685 f1d872340aa242c32eef18c6731f2603 268 Pfam PF01493 GXGXG motif 74 207 7.2E-15 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS07685 f1d872340aa242c32eef18c6731f2603 268 PANTHER PTHR39673 2 206 1.7E-39 T 23-04-2016 MSIP34_RS07685 f1d872340aa242c32eef18c6731f2603 268 PANTHER PTHR39673:SF3 2 206 1.7E-39 T 23-04-2016 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 117 30.367 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 PIRSF PIRSF002191 1 126 1.6E-49 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 SUPERFAMILY SSF50104 2 118 1.81E-45 T 23-04-2016 IPR008991 Translation protein SH3-like domain MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 Pfam PF01245 Ribosomal protein L19 4 116 2.8E-46 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 116 7.4E-48 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 PANTHER PTHR15680 1 123 1.2E-55 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 PRINTS PR00061 Ribosomal protein L19 signature 37 66 1.5E-37 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.5E-37 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS12025 0878db4d4a628a36c045833e3f4f6f39 127 PRINTS PR00061 Ribosomal protein L19 signature 7 36 1.5E-37 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 PANTHER PTHR30203 4 449 9.1E-142 T 23-04-2016 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 Gene3D G3DSA:1.20.1600.10 42 449 8.3E-101 T 23-04-2016 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 4 447 9.7E-98 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 Pfam PF02321 Outer membrane efflux protein 54 239 8.2E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 Pfam PF02321 Outer membrane efflux protein 265 432 2.3E-17 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 PANTHER PTHR30203:SF10 4 449 9.1E-142 T 23-04-2016 MSIP34_RS02190 c062444c684c01fdaf5f2264fd5a9fc3 456 SUPERFAMILY SSF56954 4 449 1.31E-96 T 23-04-2016 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 PANTHER PTHR11986:SF79 1 389 6.3E-159 T 23-04-2016 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 387 1.2E-143 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 Gene3D G3DSA:3.90.1150.10 298 388 4.4E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 Gene3D G3DSA:3.90.1150.10 3 48 4.4E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 PANTHER PTHR11986 1 389 6.3E-159 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 SUPERFAMILY SSF53383 4 387 2.09E-124 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 Gene3D G3DSA:3.40.640.10 49 296 2.6E-86 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 Pfam PF00202 Aminotransferase class-III 13 384 3.3E-112 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 214 251 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS07940 10153ffc3f57359545a964d883a9c7ca 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 2 388 43.459 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 Gene3D G3DSA:3.30.1060.10 3 159 1.3E-70 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 154 8.4E-57 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 SUPERFAMILY SSF55068 3 170 2.09E-71 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 PANTHER PTHR10173 4 160 4.4E-77 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 PANTHER PTHR10173:SF34 4 160 4.4E-77 T 23-04-2016 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 Pfam PF01625 Peptide methionine sulfoxide reductase 8 159 1.9E-63 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 MSIP34_RS03300 56a553c7933607584745a338d3e52896 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 35.573 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 SUPERFAMILY SSF50156 83 172 4.56E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 SMART SM00228 207 276 1.5E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 SUPERFAMILY SSF50156 206 288 1.31E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 Gene3D G3DSA:2.30.42.10 213 286 1.5E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 Gene3D G3DSA:2.30.42.10 92 178 2.0E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 PANTHER PTHR22939 216 449 1.6E-70 T 23-04-2016 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 PANTHER PTHR22939 67 88 1.6E-70 T 23-04-2016 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 Pfam PF02163 Peptidase family M50 6 434 2.7E-78 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 PANTHER PTHR22939:SF78 216 449 1.6E-70 T 23-04-2016 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 PANTHER PTHR22939:SF78 67 88 1.6E-70 T 23-04-2016 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 448 1.0E-111 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 MSIP34_RS07135 fd43ff906bd49ab92b16c19e8b98dec2 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 216 271 1.0E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 TIGRFAM TIGR03121 one_C_dehyd_A: formylmethanofuran dehydrogenase subunit A 3 540 1.4E-231 T 23-04-2016 IPR012027 Formylmethanofuran dehydrogenase, subunit A MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 Gene3D G3DSA:2.30.40.10 5 86 4.5E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 Pfam PF07969 Amidohydrolase family 43 492 7.5E-62 T 23-04-2016 IPR013108 Amidohydrolase 3 MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 SUPERFAMILY SSF51556 55 450 5.92E-30 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 SUPERFAMILY SSF51338 450 494 1.03E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 SUPERFAMILY SSF51338 4 54 1.03E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 Gene3D G3DSA:2.30.40.10 370 494 2.2E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS07675 652dfe5c113bd828852a816eec6749f4 559 PIRSF PIRSF006453 1 552 7.7E-235 T 23-04-2016 IPR012027 Formylmethanofuran dehydrogenase, subunit A MSIP34_RS06590 d4132bfac5cd4a98060e6e14c81d6ce0 265 PANTHER PTHR34315 34 259 2.5E-43 T 23-04-2016 MSIP34_RS06590 d4132bfac5cd4a98060e6e14c81d6ce0 265 SUPERFAMILY SSF49482 17 203 9.42E-43 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 MSIP34_RS06590 d4132bfac5cd4a98060e6e14c81d6ce0 265 Gene3D G3DSA:2.60.130.10 32 201 2.2E-45 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 MSIP34_RS06590 d4132bfac5cd4a98060e6e14c81d6ce0 265 Pfam PF00775 Dioxygenase 46 145 8.3E-12 T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 Pfam PF02355 Protein export membrane protein 426 595 2.5E-19 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 PANTHER PTHR30081 226 284 7.5E-181 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 PANTHER PTHR30081 319 602 7.5E-181 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 PANTHER PTHR30081 1 173 7.5E-181 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 607 48.135 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 PANTHER PTHR30081:SF1 226 284 7.5E-181 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 PANTHER PTHR30081:SF1 319 602 7.5E-181 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 PANTHER PTHR30081:SF1 1 173 7.5E-181 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 593 1.9E-144 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 Pfam PF13721 SecD export protein N-terminal TM region 1 103 1.4E-38 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 SUPERFAMILY SSF82866 403 601 4.97E-38 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 Gene3D G3DSA:1.20.1640.10 435 598 1.8E-22 T 23-04-2016 MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 Pfam PF07549 SecD/SecF GG Motif 115 141 9.4E-7 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site MSIP34_RS11230 0973d2f1f65d1b3d084ac45e358e916b 609 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 352 586 5.1E-74 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial MSIP34_RS07505 780ddaf4d832d79b96bf9fee8935daad 119 PANTHER PTHR36180:SF2 1 105 1.8E-19 T 23-04-2016 MSIP34_RS07505 780ddaf4d832d79b96bf9fee8935daad 119 Pfam PF02498 BRO family, N-terminal domain 5 90 3.7E-21 T 23-04-2016 IPR003497 BRO N-terminal domain MSIP34_RS07505 780ddaf4d832d79b96bf9fee8935daad 119 SMART SM01040 5 90 3.8E-26 T 23-04-2016 IPR003497 BRO N-terminal domain MSIP34_RS07505 780ddaf4d832d79b96bf9fee8935daad 119 PANTHER PTHR36180 1 105 1.8E-19 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 164 180 2.3E-20 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 272 284 2.3E-20 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 325 2.3E-20 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 188 202 2.3E-20 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 Pfam PF02384 N-6 DNA Methylase 142 462 3.7E-77 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 275 281 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 SUPERFAMILY SSF53335 4 490 3.19E-116 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 Gene3D G3DSA:3.40.50.150 166 407 7.6E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 PANTHER PTHR30195:SF2 127 390 6.6E-46 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 PANTHER PTHR30195 127 390 6.6E-46 T 23-04-2016 MSIP34_RS05565 e18891e162919bc02e70f2720ae33c07 497 Pfam PF12161 HsdM N-terminal domain 8 132 4.7E-13 T 23-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain MSIP34_RS01325 81a0c5b3b9a277c3c75692d042a8a430 214 PANTHER PTHR30093 1 63 5.9E-13 T 23-04-2016 MSIP34_RS01325 81a0c5b3b9a277c3c75692d042a8a430 214 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 1.1E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS01325 81a0c5b3b9a277c3c75692d042a8a430 214 SUPERFAMILY SSF54523 90 121 1.88E-10 T 23-04-2016 MSIP34_RS01325 81a0c5b3b9a277c3c75692d042a8a430 214 SUPERFAMILY SSF54523 7 63 1.88E-10 T 23-04-2016 MSIP34_RS01325 81a0c5b3b9a277c3c75692d042a8a430 214 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 8.9E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS01325 81a0c5b3b9a277c3c75692d042a8a430 214 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS07870 42f95b0500083f09c6fce8b2654712f9 207 PANTHER PTHR22854:SF6 2 202 3.9E-68 T 23-04-2016 MSIP34_RS07870 42f95b0500083f09c6fce8b2654712f9 207 SUPERFAMILY SSF51366 3 202 5.18E-63 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS07870 42f95b0500083f09c6fce8b2654712f9 207 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 205 42.181 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 MSIP34_RS07870 42f95b0500083f09c6fce8b2654712f9 207 PANTHER PTHR22854 2 202 3.9E-68 T 23-04-2016 MSIP34_RS07870 42f95b0500083f09c6fce8b2654712f9 207 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 199 1.7E-52 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 MSIP34_RS07870 42f95b0500083f09c6fce8b2654712f9 207 Gene3D G3DSA:3.20.20.70 2 202 3.9E-73 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS00285 569d8550aa9131f580d12d4a206f63e6 291 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 3 286 29.316 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 MSIP34_RS00285 569d8550aa9131f580d12d4a206f63e6 291 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 65 87 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site MSIP34_RS00285 569d8550aa9131f580d12d4a206f63e6 291 Pfam PF01040 UbiA prenyltransferase family 26 270 1.6E-61 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 MSIP34_RS00285 569d8550aa9131f580d12d4a206f63e6 291 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 10 285 1.3E-102 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 MSIP34_RS00285 569d8550aa9131f580d12d4a206f63e6 291 PANTHER PTHR11048:SF7 1 286 8.7E-80 T 23-04-2016 MSIP34_RS00285 569d8550aa9131f580d12d4a206f63e6 291 PANTHER PTHR11048 1 286 8.7E-80 T 23-04-2016 MSIP34_RS11605 e9ebcec292869413d52c921687356959 145 Pfam PF01152 Bacterial-like globin 30 142 4.8E-14 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 MSIP34_RS11605 e9ebcec292869413d52c921687356959 145 SUPERFAMILY SSF46458 26 143 4.52E-23 T 23-04-2016 IPR009050 Globin-like MSIP34_RS11605 e9ebcec292869413d52c921687356959 145 Gene3D G3DSA:1.10.490.10 22 144 1.5E-31 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 MSIP34_RS02495 15ade34b3255fc9a63c45706cda7fd38 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 43 50 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02495 15ade34b3255fc9a63c45706cda7fd38 211 PANTHER PTHR11002 1 211 1.0E-66 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02495 15ade34b3255fc9a63c45706cda7fd38 211 SMART SM00947 31 201 1.5E-60 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02495 15ade34b3255fc9a63c45706cda7fd38 211 SUPERFAMILY SSF53056 2 206 1.06E-60 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02495 15ade34b3255fc9a63c45706cda7fd38 211 Pfam PF00484 Carbonic anhydrase 38 197 5.6E-47 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS02495 15ade34b3255fc9a63c45706cda7fd38 211 Gene3D G3DSA:3.40.1050.10 1 208 1.5E-65 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 PANTHER PTHR34137 1 66 5.5E-13 T 23-04-2016 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 PIRSF PIRSF006488 1 77 6.0E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 11 66 1.7E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 Pfam PF02609 Exonuclease VII small subunit 12 63 3.6E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 Gene3D G3DSA:1.10.287.1040 8 69 9.2E-24 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 11 52 1.0E-10 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 SUPERFAMILY SSF116842 8 68 1.01E-18 T 23-04-2016 MSIP34_RS03040 22b190be93c59303566b81813cc21806 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 11 71 13.681 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS04840 25ba589876a8d320d2314515f4cf10df 242 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 10 241 1.4E-104 T 23-04-2016 IPR017792 Urea carboxylase-associated protein 2 MSIP34_RS04840 25ba589876a8d320d2314515f4cf10df 242 PANTHER PTHR31527 5 238 2.0E-31 T 23-04-2016 MSIP34_RS04840 25ba589876a8d320d2314515f4cf10df 242 PANTHER PTHR31527:SF0 5 238 2.0E-31 T 23-04-2016 MSIP34_RS04840 25ba589876a8d320d2314515f4cf10df 242 Pfam PF09347 Domain of unknown function (DUF1989) 14 186 4.3E-56 T 23-04-2016 IPR018959 Domain of unknown function DUF1989 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 251 2.4E-112 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 251 48.763 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 SUPERFAMILY SSF51366 3 251 1.81E-86 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 PANTHER PTHR21235 2 252 2.5E-125 T 23-04-2016 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 Gene3D G3DSA:3.20.20.70 5 252 9.2E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 Pfam PF00977 Histidine biosynthesis protein 6 235 1.6E-89 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 MSIP34_RS01415 0f2209ca64a82b8181384726761f1151 252 PANTHER PTHR21235:SF2 2 252 2.5E-125 T 23-04-2016 MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 Gene3D G3DSA:3.40.50.150 13 265 1.2E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 SUPERFAMILY SSF53335 12 273 7.67E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 PANTHER PTHR13090 7 280 1.1E-66 T 23-04-2016 MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 Pfam PF08241 Methyltransferase domain 53 155 1.1E-22 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 8 272 33.947 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 16 272 1.7E-76 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 MSIP34_RS02885 adb43bc3df3c4bd488587f870b480cf3 296 PANTHER PTHR13090:SF3 7 280 1.1E-66 T 23-04-2016 MSIP34_RS01425 d79aad9ceaa26fd320d58796634fbbf0 105 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 22.462 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 MSIP34_RS01425 d79aad9ceaa26fd320d58796634fbbf0 105 PANTHER PTHR21256 3 103 1.1E-41 T 23-04-2016 MSIP34_RS01425 d79aad9ceaa26fd320d58796634fbbf0 105 SUPERFAMILY SSF101386 3 92 1.87E-27 T 23-04-2016 MSIP34_RS01425 d79aad9ceaa26fd320d58796634fbbf0 105 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 88 1.3E-32 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 MSIP34_RS01425 d79aad9ceaa26fd320d58796634fbbf0 105 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 91 1.4E-18 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 2.1E-121 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 2.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 2.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 2.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 2.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 2.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 SUPERFAMILY SSF160544 244 351 2.35E-39 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PANTHER PTHR30531:SF4 1 361 1.0E-136 T 23-04-2016 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 Gene3D G3DSA:3.40.1690.10 218 357 1.1E-60 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 351 1.0E-119 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 MSIP34_RS04040 3b46087e2d13dcb5665ab14190adb95d 384 PANTHER PTHR30531 1 361 1.0E-136 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 MSIP34_RS03520 4c223b4d4d4e27a9d623eb9462d8b7ab 284 SUPERFAMILY SSF51735 5 278 2.33E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03520 4c223b4d4d4e27a9d623eb9462d8b7ab 284 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 165 3.1E-11 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 MSIP34_RS03520 4c223b4d4d4e27a9d623eb9462d8b7ab 284 PANTHER PTHR10366 4 278 5.1E-25 T 23-04-2016 MSIP34_RS03520 4c223b4d4d4e27a9d623eb9462d8b7ab 284 Gene3D G3DSA:3.40.50.720 6 202 9.5E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 PIRSF PIRSF000167 3 453 4.2E-169 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 SMART SM00729 49 270 4.1E-55 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 Pfam PF06969 HemN C-terminal domain 361 429 4.2E-11 T 23-04-2016 IPR010723 HemN, C-terminal MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 SUPERFAMILY SSF102114 4 439 5.49E-135 T 23-04-2016 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 PANTHER PTHR13932:SF6 1 447 4.3E-198 T 23-04-2016 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 444 5.3E-173 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 PANTHER PTHR13932 1 447 4.3E-198 T 23-04-2016 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 Pfam PF04055 Radical SAM superfamily 55 226 3.2E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS04230 8503c3bfdb2f0eb04e7c3956702dd8bc 464 Gene3D G3DSA:3.80.30.20 50 274 1.8E-28 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.2E-30 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 PANTHER PTHR30437 1 157 8.3E-64 T 23-04-2016 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 31.644 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 4.6E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 SUPERFAMILY SSF54534 83 157 1.07E-22 T 23-04-2016 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 SUPERFAMILY SSF46557 3 78 6.02E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 Gene3D G3DSA:1.10.287.180 1 75 8.1E-33 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 Gene3D G3DSA:3.10.50.30 82 157 3.2E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 9.6E-55 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 MSIP34_RS09495 83d1ad5158a7f9e972de3c52cf584e3d 158 PIRSF PIRSF006092 1 158 8.1E-52 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 MSIP34_RS00515 50cb8253293a0e5c140048036465775f 82 Gene3D G3DSA:3.30.110.40 1 79 1.7E-30 T 23-04-2016 IPR001455 TusA-like domain MSIP34_RS00515 50cb8253293a0e5c140048036465775f 82 Pfam PF01206 Sulfurtransferase TusA 5 79 1.2E-24 T 23-04-2016 IPR001455 TusA-like domain MSIP34_RS00515 50cb8253293a0e5c140048036465775f 82 PANTHER PTHR33279 1 81 5.5E-20 T 23-04-2016 MSIP34_RS00515 50cb8253293a0e5c140048036465775f 82 SUPERFAMILY SSF64307 2 79 5.62E-24 T 23-04-2016 IPR001455 TusA-like domain MSIP34_RS00515 50cb8253293a0e5c140048036465775f 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-04-2016 IPR001455 TusA-like domain MSIP34_RS01590 84913f34d3dc009eaf2f400be785ce67 106 Pfam PF00276 Ribosomal protein L23 16 102 6.1E-30 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01590 84913f34d3dc009eaf2f400be785ce67 106 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 15 105 22.49 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01590 84913f34d3dc009eaf2f400be785ce67 106 Gene3D G3DSA:3.30.70.330 13 104 3.4E-32 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 MSIP34_RS01590 84913f34d3dc009eaf2f400be785ce67 106 SUPERFAMILY SSF54189 12 100 1.62E-29 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01590 84913f34d3dc009eaf2f400be785ce67 106 PANTHER PTHR11620 16 103 4.9E-22 T 23-04-2016 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 Gene3D G3DSA:3.40.50.620 12 164 1.9E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 12 68 1.4E-14 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PANTHER PTHR21342:SF1 7 165 3.9E-73 T 23-04-2016 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 12 164 6.6E-55 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PANTHER PTHR21342 7 165 3.9E-73 T 23-04-2016 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 120 142 3.6E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 57 81 3.6E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 93 109 3.6E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 28 49 3.6E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 10 28 3.6E-50 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 10 166 34.243 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 Pfam PF01467 Cytidylyltransferase-like 13 141 1.3E-17 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 MSIP34_RS09710 8727ef6b301786b807c0ad850fccce44 171 SUPERFAMILY SSF52374 11 163 4.56E-42 T 23-04-2016 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 Pfam PF01327 Polypeptide deformylase 4 152 2.1E-51 T 23-04-2016 IPR023635 Peptide deformylase MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 Gene3D G3DSA:3.90.45.10 5 164 3.6E-65 T 23-04-2016 IPR023635 Peptide deformylase MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PANTHER PTHR10458:SF10 1 164 4.1E-93 T 23-04-2016 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 SUPERFAMILY SSF56420 2 164 4.84E-62 T 23-04-2016 IPR023635 Peptide deformylase MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.012 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.0E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PANTHER PTHR10458 1 164 4.1E-93 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PRINTS PR01576 Peptide deformylase signature 120 149 1.2E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PRINTS PR01576 Peptide deformylase signature 101 119 1.2E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PRINTS PR01576 Peptide deformylase signature 89 100 1.2E-38 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS00975 a3bc6eb0590b67791493857c1f30b688 166 PIRSF PIRSF004749 1 166 2.8E-56 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 5.2E-67 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 SUPERFAMILY SSF69765 1 158 1.57E-66 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.748 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 Pfam PF02542 YgbB family 2 156 7.8E-67 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 PANTHER PTHR32125 1 160 7.1E-54 T 23-04-2016 MSIP34_RS06025 0f5344666b76b13b32a24c966422a66c 160 Gene3D G3DSA:3.30.1330.50 1 157 1.1E-71 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 MSIP34_RS13160 d754e6337849c1936c10cd5e56b754c7 179 SUPERFAMILY SSF53850 45 166 1.87E-9 T 23-04-2016 MSIP34_RS13160 d754e6337849c1936c10cd5e56b754c7 179 Gene3D G3DSA:3.40.190.10 63 161 2.4E-7 T 23-04-2016 MSIP34_RS04355 744a93a553925de49150bbeee704036c 1195 Pfam PF03797 Autotransporter beta-domain 716 975 1.0E-34 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS04355 744a93a553925de49150bbeee704036c 1195 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 708 872 2.4E-14 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 MSIP34_RS04355 744a93a553925de49150bbeee704036c 1195 SMART SM00869 714 1001 1.3E-28 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS04355 744a93a553925de49150bbeee704036c 1195 SUPERFAMILY SSF54427 1082 1188 4.03E-6 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS04355 744a93a553925de49150bbeee704036c 1195 Gene3D G3DSA:2.40.128.130 675 1011 3.9E-57 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS04355 744a93a553925de49150bbeee704036c 1195 SUPERFAMILY SSF103515 666 1011 8.11E-39 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS06270 90e1155bdd30e0cd3d7aeee7baf44382 467 PANTHER PTHR35861:SF1 272 459 3.5E-40 T 23-04-2016 MSIP34_RS06270 90e1155bdd30e0cd3d7aeee7baf44382 467 Pfam PF04984 Phage tail sheath protein 276 459 2.3E-15 T 23-04-2016 IPR007067 Tail sheath protein MSIP34_RS06270 90e1155bdd30e0cd3d7aeee7baf44382 467 PANTHER PTHR35861 272 459 3.5E-40 T 23-04-2016 MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 SUPERFAMILY SSF90002 247 337 5.62E-18 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 Gene3D G3DSA:3.30.1220.10 240 339 7.4E-22 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 SUPERFAMILY SSF52540 6 192 4.88E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 SMART SM00833 247 340 9.8E-13 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 192 2.2E-41 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 PANTHER PTHR13748 1 339 6.5E-69 T 23-04-2016 MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 247 338 3.3E-16 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal MSIP34_RS04530 0e3f6c7decf258dd2c0a39bff4cb48bd 340 Gene3D G3DSA:3.40.50.300 6 212 9.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04890 ea4f4c655b7f821ae3c6b0e5edb7cfd6 360 SUPERFAMILY SSF51569 11 352 2.62E-133 T 23-04-2016 MSIP34_RS04890 ea4f4c655b7f821ae3c6b0e5edb7cfd6 360 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 353 6.4E-161 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS04890 ea4f4c655b7f821ae3c6b0e5edb7cfd6 360 PANTHER PTHR21225 1 358 2.4E-221 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS04890 ea4f4c655b7f821ae3c6b0e5edb7cfd6 360 PIRSF PIRSF001361 1 356 3.7E-158 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 MSIP34_RS04890 ea4f4c655b7f821ae3c6b0e5edb7cfd6 360 Pfam PF00793 DAHP synthetase I family 45 341 5.4E-102 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS04890 ea4f4c655b7f821ae3c6b0e5edb7cfd6 360 Gene3D G3DSA:3.20.20.70 13 355 1.5E-152 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS06900 10eb18a11d1434d12978e47cbb1a0a45 64 SUPERFAMILY SSF69047 1 63 2.48E-24 T 23-04-2016 IPR008462 CsbD-like MSIP34_RS06900 10eb18a11d1434d12978e47cbb1a0a45 64 Pfam PF05532 CsbD-like 4 55 1.0E-18 T 23-04-2016 IPR008462 CsbD-like MSIP34_RS06900 10eb18a11d1434d12978e47cbb1a0a45 64 PIRSF PIRSF039008 1 64 2.5E-31 T 23-04-2016 IPR026042 Stress response protein YjbJ MSIP34_RS06900 10eb18a11d1434d12978e47cbb1a0a45 64 Gene3D G3DSA:1.10.1470.10 1 64 4.1E-28 T 23-04-2016 IPR008462 CsbD-like MSIP34_RS06900 10eb18a11d1434d12978e47cbb1a0a45 64 PANTHER PTHR34977 1 63 3.3E-13 T 23-04-2016 MSIP34_RS07585 23e7634e06022927d9702b601c9711e3 131 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 15 102 2.6E-22 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 MSIP34_RS07585 23e7634e06022927d9702b601c9711e3 131 PANTHER PTHR12599 16 106 2.2E-13 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 MSIP34_RS07585 23e7634e06022927d9702b601c9711e3 131 SUPERFAMILY SSF55248 18 106 2.09E-25 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 MSIP34_RS07585 23e7634e06022927d9702b601c9711e3 131 Gene3D G3DSA:3.30.1360.20 14 105 5.9E-23 T 23-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 PANTHER PTHR10259 1 194 1.9E-67 T 23-04-2016 MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 211 38.655 T 23-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 SUPERFAMILY SSF53335 1 196 8.55E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 Gene3D G3DSA:3.40.50.150 16 202 9.5E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 PANTHER PTHR10259:SF16 1 194 1.9E-67 T 23-04-2016 MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 209 1.4E-80 T 23-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 192 9.9E-61 T 23-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 MSIP34_RS09780 1d3450d5f9f888f1676bd8299eef493c 215 PIRSF PIRSF023956 1 213 1.8E-79 T 23-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 MSIP34_RS05515 b7412b0b7c5ab19c7d9aa54a22de82c6 756 PANTHER PTHR30509 55 300 1.1E-74 T 23-04-2016 MSIP34_RS05515 b7412b0b7c5ab19c7d9aa54a22de82c6 756 PANTHER PTHR30509 372 708 1.1E-74 T 23-04-2016 MSIP34_RS05515 b7412b0b7c5ab19c7d9aa54a22de82c6 756 Pfam PF04632 Fusaric acid resistance protein family 65 739 1.5E-155 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 MSIP34_RS05515 b7412b0b7c5ab19c7d9aa54a22de82c6 756 PANTHER PTHR30509:SF6 55 300 1.1E-74 T 23-04-2016 MSIP34_RS05515 b7412b0b7c5ab19c7d9aa54a22de82c6 756 PANTHER PTHR30509:SF6 372 708 1.1E-74 T 23-04-2016 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 198 2.7E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.7E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.7E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 174 184 2.7E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 274 3.8E-117 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 PANTHER PTHR11451 1 240 1.7E-101 T 23-04-2016 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 Gene3D G3DSA:3.90.800.10 69 174 2.3E-18 T 23-04-2016 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 294 43.456 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 PANTHER PTHR11451:SF35 1 240 1.7E-101 T 23-04-2016 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 Gene3D G3DSA:3.40.50.620 3 68 1.6E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 Gene3D G3DSA:3.40.50.620 176 224 1.6E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 240 7.0E-43 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 MSIP34_RS05835 1f1b3d634c6cc0e49a1744c10c3e51a7 297 SUPERFAMILY SSF52374 3 289 9.48E-85 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Gene3D G3DSA:3.10.20.30 3 56 9.6E-7 T 23-04-2016 IPR012675 Beta-grasp domain MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615:SF115 350 471 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615:SF115 3 324 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615:SF115 591 661 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615:SF115 511 570 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 SUPERFAMILY SSF54292 1 74 1.82E-19 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 119 2.6E-16 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 SMART SM00929 83 123 6.3E-20 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615 350 471 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615 3 324 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615 591 661 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 PANTHER PTHR11615 511 570 1.3E-161 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Gene3D G3DSA:3.40.50.740 272 343 5.1E-48 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Gene3D G3DSA:3.40.50.740 376 413 5.1E-48 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Gene3D G3DSA:3.40.50.740 535 664 5.1E-48 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 SUPERFAMILY SSF50692 704 776 2.49E-8 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 SUPERFAMILY SSF54862 76 211 7.53E-38 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Pfam PF00384 Molybdopterin oxidoreductase 272 643 2.3E-39 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 SUPERFAMILY SSF53706 213 431 1.45E-90 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 SUPERFAMILY SSF53706 464 665 1.45E-90 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 642 2.6E-201 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Pfam PF01568 Molydopterin dinucleotide binding domain 714 776 2.2E-7 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 1.5E-18 T 23-04-2016 MSIP34_RS03460 f75db08a3b37049c0b34b172ff1d5d71 794 Gene3D G3DSA:2.40.40.20 707 775 5.5E-7 T 23-04-2016 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 Pfam PF13091 PLD-like domain 24 131 3.4E-12 T 23-04-2016 IPR025202 Phospholipase D-like domain MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 Pfam PF13091 PLD-like domain 216 340 5.4E-25 T 23-04-2016 IPR025202 Phospholipase D-like domain MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 PANTHER PTHR21248:SF5 1 382 3.0E-81 T 23-04-2016 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 SMART SM00155 108 135 0.093 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 SMART SM00155 287 314 0.017 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 385 49.347 T 23-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 SUPERFAMILY SSF56024 3 176 1.36E-41 T 23-04-2016 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 SUPERFAMILY SSF56024 192 361 3.36E-37 T 23-04-2016 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 PANTHER PTHR21248 1 382 3.0E-81 T 23-04-2016 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 Gene3D G3DSA:3.30.870.10 7 178 9.2E-39 T 23-04-2016 MSIP34_RS12300 7d27ce515eda8e9be797e79330e4561b 385 Gene3D G3DSA:3.30.870.10 211 356 9.9E-34 T 23-04-2016 MSIP34_RS13575 a5137136d4fcdee6abdac251d53850ea 177 SUPERFAMILY SSF50341 22 169 1.29E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13575 a5137136d4fcdee6abdac251d53850ea 177 Pfam PF01584 CheW-like domain 29 167 1.0E-36 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13575 a5137136d4fcdee6abdac251d53850ea 177 SMART SM00260 25 166 1.2E-35 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS13575 a5137136d4fcdee6abdac251d53850ea 177 Gene3D G3DSA:2.30.30.40 104 160 9.0E-7 T 23-04-2016 MSIP34_RS13575 a5137136d4fcdee6abdac251d53850ea 177 Gene3D G3DSA:2.40.50.180 67 103 7.3E-8 T 23-04-2016 MSIP34_RS13575 a5137136d4fcdee6abdac251d53850ea 177 PANTHER PTHR22617 25 174 6.1E-43 T 23-04-2016 MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 ProSitePatterns PS00080 Multicopper oxidases signature 2. 318 329 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 Pfam PF07732 Multicopper oxidase 88 195 1.2E-36 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 SUPERFAMILY SSF49503 174 329 6.56E-36 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 Gene3D G3DSA:2.60.40.420 202 329 2.8E-28 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 29 9.7E-6 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 PANTHER PTHR11709:SF33 85 286 4.4E-41 T 23-04-2016 MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 SUPERFAMILY SSF49503 65 196 2.06E-38 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 Gene3D G3DSA:2.60.40.420 50 190 3.1E-37 T 23-04-2016 IPR008972 Cupredoxin MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 PANTHER PTHR11709 85 286 4.4E-41 T 23-04-2016 MSIP34_RS02050 e82375ee7d4f139e64195f1dec8e8cfc 459 Pfam PF07731 Multicopper oxidase 220 333 3.1E-23 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 Pfam PF00672 HAMP domain 159 226 2.2E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 440 3.1E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 PANTHER PTHR24421:SF1 230 446 4.1E-53 T 23-04-2016 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 PANTHER PTHR24421 230 446 4.1E-53 T 23-04-2016 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 Pfam PF16448 LapD/MoxY periplasmic domain 25 152 1.3E-5 T 23-04-2016 IPR032244 LapD/MoxY, periplasmic domain MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 SMART SM00387 351 443 8.5E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 SMART SM00304 178 230 4.9E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 Pfam PF07730 Histidine kinase 246 312 2.7E-14 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 Gene3D G3DSA:3.30.565.10 349 445 1.2E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 1.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 1.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 440 1.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS03735 f76900120c6e193d2108d6755a5c4781 450 SUPERFAMILY SSF55874 320 440 3.01E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 PANTHER PTHR12526 154 291 9.1E-105 T 23-04-2016 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 PANTHER PTHR12526 354 471 9.1E-105 T 23-04-2016 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 SUPERFAMILY SSF51182 187 471 1.78E-84 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 Gene3D G3DSA:2.60.120.10 360 471 1.6E-45 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2 471 2.8E-217 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 Pfam PF01050 Mannose-6-phosphate isomerase 317 467 5.0E-74 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 Pfam PF00483 Nucleotidyl transferase 4 287 1.4E-64 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 PANTHER PTHR12526:SF387 154 291 9.1E-105 T 23-04-2016 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 PANTHER PTHR12526:SF387 354 471 9.1E-105 T 23-04-2016 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 Gene3D G3DSA:3.90.550.10 2 273 4.0E-95 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 Gene3D G3DSA:3.30.450.30 283 353 5.0E-5 T 23-04-2016 MSIP34_RS09210 2b8f7bb9759670ec3718de125945c7d6 472 SUPERFAMILY SSF53448 1 282 2.07E-71 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09245 fc82e7f02cc087f8d7ef7d372a6fbacb 433 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 55 414 1.4E-111 T 23-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 MSIP34_RS09245 fc82e7f02cc087f8d7ef7d372a6fbacb 433 SUPERFAMILY SSF48230 180 315 5.68E-5 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase MSIP34_RS09245 fc82e7f02cc087f8d7ef7d372a6fbacb 433 PANTHER PTHR35339:SF3 52 428 5.9E-159 T 23-04-2016 MSIP34_RS09245 fc82e7f02cc087f8d7ef7d372a6fbacb 433 PANTHER PTHR35339 52 428 5.9E-159 T 23-04-2016 MSIP34_RS09245 fc82e7f02cc087f8d7ef7d372a6fbacb 433 PIRSF PIRSF014753 37 430 2.7E-101 T 23-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 Gene3D G3DSA:3.40.1280.10 2 154 1.9E-56 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 PANTHER PTHR33603:SF1 1 154 1.3E-58 T 23-04-2016 MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 153 6.7E-52 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 SUPERFAMILY SSF75217 1 153 2.88E-51 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.4E-50 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 PIRSF PIRSF004505 1 154 2.4E-47 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 PANTHER PTHR33603 1 154 1.3E-58 T 23-04-2016 MSIP34_RS10930 1e1c42ec000eb5e93070b1464cdcc012 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 29.015 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 MSIP34_RS03050 82605bddcba51421d968203e63349068 216 SUPERFAMILY SSF53474 14 215 6.68E-52 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS03050 82605bddcba51421d968203e63349068 216 PANTHER PTHR10655:SF17 1 216 6.8E-79 T 23-04-2016 MSIP34_RS03050 82605bddcba51421d968203e63349068 216 Pfam PF02230 Phospholipase/Carboxylesterase 8 213 6.9E-53 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 MSIP34_RS03050 82605bddcba51421d968203e63349068 216 PANTHER PTHR10655 1 216 6.8E-79 T 23-04-2016 MSIP34_RS03050 82605bddcba51421d968203e63349068 216 Gene3D G3DSA:3.40.50.1820 8 215 3.4E-68 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS13380 0053c0698c4a885e31d5979224e511cf 216 PANTHER PTHR10204:SF16 1 199 1.3E-27 T 23-04-2016 MSIP34_RS13380 0053c0698c4a885e31d5979224e511cf 216 SUPERFAMILY SSF52218 1 208 6.74E-42 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS13380 0053c0698c4a885e31d5979224e511cf 216 Pfam PF02525 Flavodoxin-like fold 1 201 9.5E-34 T 23-04-2016 IPR003680 Flavodoxin-like fold MSIP34_RS13380 0053c0698c4a885e31d5979224e511cf 216 Gene3D G3DSA:3.40.50.360 1 207 2.4E-47 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS13380 0053c0698c4a885e31d5979224e511cf 216 PANTHER PTHR10204 1 199 1.3E-27 T 23-04-2016 MSIP34_RS13380 0053c0698c4a885e31d5979224e511cf 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 205 22.816 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 MSIP34_RS07315 2d2171da889668b73edbe29d9fb6b615 414 Pfam PF01435 Peptidase family M48 210 411 2.9E-40 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 MSIP34_RS07315 2d2171da889668b73edbe29d9fb6b615 414 PANTHER PTHR10120:SF24 3 411 3.8E-117 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 MSIP34_RS07315 2d2171da889668b73edbe29d9fb6b615 414 Gene3D G3DSA:3.30.2010.10 203 295 8.6E-22 T 23-04-2016 MSIP34_RS07315 2d2171da889668b73edbe29d9fb6b615 414 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 29 206 2.1E-57 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 MSIP34_RS07315 2d2171da889668b73edbe29d9fb6b615 414 PANTHER PTHR10120 3 411 3.8E-117 T 23-04-2016 MSIP34_RS05875 ada474a13286f94a9e14009e86c78df6 340 PANTHER PTHR10361 1 336 7.6E-108 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 MSIP34_RS05875 ada474a13286f94a9e14009e86c78df6 340 PANTHER PTHR10361:SF31 1 336 7.6E-108 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 MSIP34_RS05875 ada474a13286f94a9e14009e86c78df6 340 PIRSF PIRSF005508 1 340 4.2E-108 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 MSIP34_RS05875 ada474a13286f94a9e14009e86c78df6 340 Pfam PF01758 Sodium Bile acid symporter family 47 241 2.1E-32 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 MSIP34_RS05875 ada474a13286f94a9e14009e86c78df6 340 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 2 328 2.1E-108 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 378 1.5E-83 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 297 1.5E-15 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 PANTHER PTHR30158:SF3 1 387 1.3E-168 T 23-04-2016 MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 Gene3D G3DSA:2.40.50.100 70 101 5.1E-24 T 23-04-2016 MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 Gene3D G3DSA:2.40.50.100 176 211 5.1E-24 T 23-04-2016 MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 SUPERFAMILY SSF111369 55 304 8.89E-87 T 23-04-2016 MSIP34_RS13400 9b31050909009cca9bf65fa888452a0f 390 PANTHER PTHR30158 1 387 1.3E-168 T 23-04-2016 MSIP34_RS10650 be78f1ebe0e569b3c153f41ef9de3a3e 348 Pfam PF01032 FecCD transport family 26 340 2.1E-85 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 MSIP34_RS10650 be78f1ebe0e569b3c153f41ef9de3a3e 348 PANTHER PTHR30472:SF3 17 348 1.2E-112 T 23-04-2016 MSIP34_RS10650 be78f1ebe0e569b3c153f41ef9de3a3e 348 Gene3D G3DSA:1.10.3470.10 16 346 2.8E-97 T 23-04-2016 IPR029022 ABC transporter, BtuC-like MSIP34_RS10650 be78f1ebe0e569b3c153f41ef9de3a3e 348 PANTHER PTHR30472 17 348 1.2E-112 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 MSIP34_RS10650 be78f1ebe0e569b3c153f41ef9de3a3e 348 SUPERFAMILY SSF81345 12 340 3.66E-76 T 23-04-2016 IPR029022 ABC transporter, BtuC-like MSIP34_RS07390 1d0fa9f648eb9919979a5c01f732638e 338 PANTHER PTHR30465:SF24 1 335 4.8E-117 T 23-04-2016 MSIP34_RS07390 1d0fa9f648eb9919979a5c01f732638e 338 PANTHER PTHR30465 1 335 4.8E-117 T 23-04-2016 MSIP34_RS07390 1d0fa9f648eb9919979a5c01f732638e 338 Gene3D G3DSA:1.10.3720.10 105 330 3.7E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS07390 1d0fa9f648eb9919979a5c01f732638e 338 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 128 335 4.3E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS07390 1d0fa9f648eb9919979a5c01f732638e 338 SUPERFAMILY SSF161098 104 322 2.62E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS01255 8e052b40c3efa25f49e6635b2c84d2bc 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 132 4.8E-35 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 MSIP34_RS01255 8e052b40c3efa25f49e6635b2c84d2bc 142 PANTHER PTHR38767 17 140 2.8E-21 T 23-04-2016 MSIP34_RS01255 8e052b40c3efa25f49e6635b2c84d2bc 142 Gene3D G3DSA:3.40.50.10110 1 136 1.8E-37 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 MSIP34_RS01255 8e052b40c3efa25f49e6635b2c84d2bc 142 SUPERFAMILY SSF102400 1 136 9.68E-37 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 MSIP34_RS02825 6571b8b476717d518a90ce1320ce5442 151 Gene3D G3DSA:2.30.30.40 96 148 8.1E-5 T 23-04-2016 MSIP34_RS02825 6571b8b476717d518a90ce1320ce5442 151 Pfam PF06347 Bacterial SH3 domain 99 150 2.9E-7 T 23-04-2016 IPR010466 Protein of unknown function DUF1058 MSIP34_RS02825 6571b8b476717d518a90ce1320ce5442 151 Pfam PF06347 Bacterial SH3 domain 34 85 4.7E-7 T 23-04-2016 IPR010466 Protein of unknown function DUF1058 MSIP34_RS02825 6571b8b476717d518a90ce1320ce5442 151 SUPERFAMILY SSF50044 114 148 8.62E-5 T 23-04-2016 IPR001452 SH3 domain GO:0005515 MSIP34_RS13495 f0a2210d67ce1d0e9b8162473c8346b9 118 Gene3D G3DSA:3.10.50.30 38 114 4.3E-24 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS13495 f0a2210d67ce1d0e9b8162473c8346b9 118 PANTHER PTHR30437:SF5 24 113 1.2E-30 T 23-04-2016 MSIP34_RS13495 f0a2210d67ce1d0e9b8162473c8346b9 118 PANTHER PTHR30437 24 113 1.2E-30 T 23-04-2016 MSIP34_RS13495 f0a2210d67ce1d0e9b8162473c8346b9 118 SUPERFAMILY SSF54534 40 114 9.68E-18 T 23-04-2016 MSIP34_RS13495 f0a2210d67ce1d0e9b8162473c8346b9 118 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 41 114 2.9E-21 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 473 34.716 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 PANTHER PTHR23135 1 473 1.6E-193 T 23-04-2016 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 15 473 4.5E-161 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Gene3D G3DSA:3.40.1390.10 15 92 1.3E-23 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Gene3D G3DSA:3.40.1190.10 93 326 1.1E-82 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Pfam PF01225 Mur ligase family, catalytic domain 16 90 2.2E-11 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Pfam PF08245 Mur ligase middle domain 102 302 1.4E-51 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 SUPERFAMILY SSF53244 323 473 2.35E-52 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 PANTHER PTHR23135:SF4 1 473 1.6E-193 T 23-04-2016 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 407 7.7E-25 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 Gene3D G3DSA:3.90.190.20 327 466 2.3E-58 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 SUPERFAMILY SSF63418 9 92 8.5E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS02320 bba7564729284d5df1650b72e9713012 477 SUPERFAMILY SSF53623 93 322 3.66E-77 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS09560 ea2858793b8c085f05d2374879e5eb0f 187 Pfam PF13580 SIS domain 14 145 6.9E-29 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 MSIP34_RS09560 ea2858793b8c085f05d2374879e5eb0f 187 PANTHER PTHR30390:SF6 4 186 6.3E-80 T 23-04-2016 MSIP34_RS09560 ea2858793b8c085f05d2374879e5eb0f 187 SUPERFAMILY SSF53697 9 185 5.19E-55 T 23-04-2016 MSIP34_RS09560 ea2858793b8c085f05d2374879e5eb0f 187 Gene3D G3DSA:3.40.50.10490 7 185 1.6E-62 T 23-04-2016 MSIP34_RS09560 ea2858793b8c085f05d2374879e5eb0f 187 PANTHER PTHR30390 4 186 6.3E-80 T 23-04-2016 MSIP34_RS09560 ea2858793b8c085f05d2374879e5eb0f 187 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 187 34.566 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 676 4.2E-242 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 429 451 1.3E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 275 297 1.3E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 494 515 1.3E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 1.3E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 1.3E-17 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 Pfam PF00361 Proton-conducting membrane transporter 135 417 2.1E-82 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 2.0E-26 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PANTHER PTHR22773 1 454 1.1E-254 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PANTHER PTHR22773 471 628 1.1E-254 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 325 337 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 235 256 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 430 449 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 257 283 2.5E-66 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PANTHER PTHR22773:SF50 1 454 1.1E-254 T 23-04-2016 MSIP34_RS03485 f786777763173ac8e8fef9b82fb94d93 678 PANTHER PTHR22773:SF50 471 628 1.1E-254 T 23-04-2016 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 PANTHER PTHR10291 10 249 3.0E-115 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 17 241 4.2E-91 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 SUPERFAMILY SSF64005 16 237 7.46E-87 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 241 2.9E-80 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 242 40.512 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 MSIP34_RS07150 3364ccf4490d95e04f4561c780c03a6b 249 Gene3D G3DSA:3.40.1180.10 10 248 6.5E-95 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 PANTHER PTHR10366:SF41 4 353 6.4E-174 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 340 1.5E-151 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 SUPERFAMILY SSF51735 3 352 8.18E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 Gene3D G3DSA:3.90.25.10 194 350 4.4E-57 T 23-04-2016 MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 6.8E-101 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 PANTHER PTHR10366 4 353 6.4E-174 T 23-04-2016 MSIP34_RS07355 05c11ded9c10a482c9231a47f7070b68 358 Gene3D G3DSA:3.40.50.720 3 193 5.3E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 Gene3D G3DSA:1.50.10.10 32 337 2.2E-75 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 SUPERFAMILY SSF48208 18 338 3.78E-79 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 Pfam PF01270 Glycosyl hydrolases family 8 14 334 2.3E-76 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 PRINTS PR00735 Glycosyl hydrolase family 8 signature 324 338 2.3E-20 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 PRINTS PR00735 Glycosyl hydrolase family 8 signature 177 194 2.3E-20 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 PRINTS PR00735 Glycosyl hydrolase family 8 signature 240 249 2.3E-20 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 PRINTS PR00735 Glycosyl hydrolase family 8 signature 113 131 2.3E-20 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 PRINTS PR00735 Glycosyl hydrolase family 8 signature 217 228 2.3E-20 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS00210 a5f379466501ea8d56500e0b664efae8 342 PRINTS PR00735 Glycosyl hydrolase family 8 signature 57 70 2.3E-20 T 23-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 MSIP34_RS10505 bc809e99a63b9a582ecd190377e26de0 281 SUPERFAMILY SSF46955 53 106 9.15E-5 T 23-04-2016 IPR009061 Putative DNA-binding domain MSIP34_RS10505 bc809e99a63b9a582ecd190377e26de0 281 Gene3D G3DSA:1.10.10.10 54 107 1.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 PANTHER PTHR24362 5 292 5.1E-75 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 PANTHER PTHR24362 780 785 5.1E-75 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 SUPERFAMILY SSF55781 625 783 1.29E-10 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 PANTHER PTHR24362:SF160 5 292 5.1E-75 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 PANTHER PTHR24362:SF160 780 785 5.1E-75 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 SMART SM00220 8 261 1.1E-58 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 Gene3D G3DSA:1.10.3150.10 280 552 1.0E-53 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 SUPERFAMILY SSF109604 281 551 7.22E-45 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 Pfam PF00069 Protein kinase domain 8 255 3.9E-52 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 123 135 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 SUPERFAMILY SSF56112 5 258 1.62E-72 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 Gene3D G3DSA:3.30.200.20 4 68 2.7E-19 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 Gene3D G3DSA:3.30.450.40 625 783 7.0E-10 T 23-04-2016 IPR029016 GAF domain-like MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 Gene3D G3DSA:1.10.510.10 69 265 1.1E-50 T 23-04-2016 MSIP34_RS03645 a3ea2b63a65ec0a6e752bfc20209fdd9 785 Pfam PF08668 HDOD domain 293 480 2.8E-32 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS00270 6c75c75aad6cc3eb9137ef7b568d891d 126 Gene3D G3DSA:3.30.1330.40 4 125 7.8E-49 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like MSIP34_RS00270 6c75c75aad6cc3eb9137ef7b568d891d 126 SUPERFAMILY SSF55298 1 125 8.8E-45 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like MSIP34_RS00270 6c75c75aad6cc3eb9137ef7b568d891d 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 1.3E-50 T 23-04-2016 IPR006056 RidA family MSIP34_RS00270 6c75c75aad6cc3eb9137ef7b568d891d 126 PANTHER PTHR11803 1 125 4.1E-49 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family MSIP34_RS00270 6c75c75aad6cc3eb9137ef7b568d891d 126 Pfam PF01042 Endoribonuclease L-PSP 9 124 8.7E-39 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 SUPERFAMILY SSF52540 42 87 7.1E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 SUPERFAMILY SSF52540 463 589 7.1E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 667 43.369 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 SUPERFAMILY SSF46600 622 668 1.57E-10 T 23-04-2016 IPR001943 UVR domain GO:0005515 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 PANTHER PTHR24029 4 669 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 10 665 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Gene3D G3DSA:3.40.50.300 283 343 1.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Gene3D G3DSA:3.40.50.300 393 414 1.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Gene3D G3DSA:3.40.50.300 12 94 1.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 SUPERFAMILY SSF52540 10 419 2.18E-135 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Pfam PF04851 Type III restriction enzyme, res subunit 21 140 4.5E-9 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Gene3D G3DSA:3.30.2060.10 165 237 1.4E-11 T 23-04-2016 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Pfam PF02151 UvrB/uvrC motif 633 666 1.5E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 SMART SM00487 14 430 4.3E-28 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Pfam PF12344 Ultra-violet resistance protein B 556 598 7.3E-20 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Gene3D G3DSA:3.40.50.300 422 585 5.5E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 SMART SM00490 464 550 6.1E-20 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Pfam PF00271 Helicase conserved C-terminal domain 440 549 6.8E-18 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS06440 2ae4dde3b0e2adfdaed960eab23bd3c9 678 Gene3D G3DSA:4.10.860.10 627 669 7.0E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 MSIP34_RS01085 777dc2d40d053ca11aae8883ee5df2f5 174 Gene3D G3DSA:3.40.50.1000 5 169 2.5E-43 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS01085 777dc2d40d053ca11aae8883ee5df2f5 174 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 11 163 1.2E-42 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS01085 777dc2d40d053ca11aae8883ee5df2f5 174 PANTHER PTHR21485 4 166 2.1E-40 T 23-04-2016 MSIP34_RS01085 777dc2d40d053ca11aae8883ee5df2f5 174 PIRSF PIRSF006118 2 173 6.6E-58 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 MSIP34_RS01085 777dc2d40d053ca11aae8883ee5df2f5 174 Pfam PF08282 haloacid dehalogenase-like hydrolase 86 149 7.4E-6 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS01085 777dc2d40d053ca11aae8883ee5df2f5 174 SUPERFAMILY SSF56784 7 168 1.16E-41 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS08045 0e546093ebb589c0a8676149ddb963ed 146 Gene3D G3DSA:3.90.190.10 7 113 3.3E-31 T 23-04-2016 IPR029021 Protein-tyrosine phosphatase-like MSIP34_RS08045 0e546093ebb589c0a8676149ddb963ed 146 Pfam PF04273 Putative phosphatase (DUF442) 6 107 5.8E-28 T 23-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- MSIP34_RS08045 0e546093ebb589c0a8676149ddb963ed 146 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 7 107 8.2E-27 T 23-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 PANTHER PTHR30126 5 285 7.8E-115 T 23-04-2016 MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 Gene3D G3DSA:1.10.10.10 6 90 4.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 Gene3D G3DSA:3.40.190.10 186 258 3.3E-7 T 23-04-2016 MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 PANTHER PTHR30126:SF4 5 285 7.8E-115 T 23-04-2016 MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 Pfam PF03466 LysR substrate binding domain 92 287 1.1E-20 T 23-04-2016 IPR005119 LysR, substrate-binding MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 5.5E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 Gene3D G3DSA:3.40.190.10 93 185 2.0E-9 T 23-04-2016 MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 SUPERFAMILY SSF46785 4 111 1.72E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS04975 1cf130c5dc5303cf526954d9b5a47749 300 SUPERFAMILY SSF53850 93 293 2.17E-23 T 23-04-2016 MSIP34_RS05120 3ab0dbdfcb457f5881be387ffb9d33be 189 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 186 3.2E-56 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 MSIP34_RS05120 3ab0dbdfcb457f5881be387ffb9d33be 189 PANTHER PTHR14269:SF13 2 185 1.5E-68 T 23-04-2016 MSIP34_RS05120 3ab0dbdfcb457f5881be387ffb9d33be 189 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MSIP34_RS05120 3ab0dbdfcb457f5881be387ffb9d33be 189 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 76 3.0E-19 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 MSIP34_RS05120 3ab0dbdfcb457f5881be387ffb9d33be 189 PANTHER PTHR14269 2 185 1.5E-68 T 23-04-2016 MSIP34_RS05120 3ab0dbdfcb457f5881be387ffb9d33be 189 PIRSF PIRSF000847 1 189 1.3E-43 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 MSIP34_RS05620 953f3ef384a509935124c26bf5dcc573 387 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 7 386 33.616 T 23-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 MSIP34_RS05620 953f3ef384a509935124c26bf5dcc573 387 SUPERFAMILY SSF48452 151 280 1.38E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05620 953f3ef384a509935124c26bf5dcc573 387 Gene3D G3DSA:1.25.40.10 38 279 2.7E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05620 953f3ef384a509935124c26bf5dcc573 387 SUPERFAMILY SSF48452 39 172 4.55E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05620 953f3ef384a509935124c26bf5dcc573 387 Pfam PF13432 Tetratricopeptide repeat 53 97 0.0031 T 23-04-2016 MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 SUPERFAMILY SSF55920 3 254 2.88E-91 T 23-04-2016 IPR000994 Peptidase M24, structural domain MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 PANTHER PTHR10804:SF75 1 253 1.6E-150 T 23-04-2016 MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 PANTHER PTHR10804 1 253 1.6E-150 T 23-04-2016 MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 253 4.3E-98 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 41.702 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 Gene3D G3DSA:3.90.230.10 3 254 1.6E-98 T 23-04-2016 IPR000994 Peptidase M24, structural domain MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 Pfam PF00557 Metallopeptidase family M24 12 246 1.0E-55 T 23-04-2016 IPR000994 Peptidase M24, structural domain MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 8.8E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 8.8E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 8.8E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 8.8E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase MSIP34_RS07175 53d3fe591201abce6ee342f385b5b28f 265 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MSIP34_RS09690 cb49371f98ebedb9577fa64685e4428b 332 PANTHER PTHR23024 79 330 4.6E-95 T 23-04-2016 MSIP34_RS09690 cb49371f98ebedb9577fa64685e4428b 332 SUPERFAMILY SSF53474 38 331 6.32E-66 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS09690 cb49371f98ebedb9577fa64685e4428b 332 Pfam PF07859 alpha/beta hydrolase fold 97 304 2.8E-68 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 MSIP34_RS09690 cb49371f98ebedb9577fa64685e4428b 332 Gene3D G3DSA:3.40.50.1820 11 331 7.4E-91 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS09690 cb49371f98ebedb9577fa64685e4428b 332 PANTHER PTHR23024:SF128 79 330 4.6E-95 T 23-04-2016 MSIP34_RS09690 cb49371f98ebedb9577fa64685e4428b 332 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 97 113 - T 23-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 MSIP34_RS06745 6b8e04093ebbb5f9d580932f6426e77e 203 Pfam PF01794 Ferric reductase like transmembrane component 49 162 3.8E-14 T 23-04-2016 IPR013130 Ferric reductase transmembrane component-like domain MSIP34_RS06745 6b8e04093ebbb5f9d580932f6426e77e 203 PANTHER PTHR36964 1 191 4.8E-53 T 23-04-2016 MSIP34_RS06745 6b8e04093ebbb5f9d580932f6426e77e 203 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 2 200 24.558 T 23-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 SUPERFAMILY SSF52540 15 203 2.93E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 PANTHER PTHR30069 11 203 2.9E-59 T 23-04-2016 MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 27 6.9E-8 T 23-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 30 203 2.5E-64 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 Gene3D G3DSA:3.40.50.300 9 203 1.3E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 PIRSF PIRSF015617 8 203 2.8E-68 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS00810 d53df44258788727a13bd2cf91e0ffb6 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 34 203 5.6E-60 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 MSIP34_RS12135 4d6377e150634f2b7cd936e6cfcbaa03 198 PANTHER PTHR10204:SF42 3 177 1.3E-71 T 23-04-2016 MSIP34_RS12135 4d6377e150634f2b7cd936e6cfcbaa03 198 Gene3D G3DSA:3.40.50.360 3 176 3.6E-49 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS12135 4d6377e150634f2b7cd936e6cfcbaa03 198 PANTHER PTHR10204 3 177 1.3E-71 T 23-04-2016 MSIP34_RS12135 4d6377e150634f2b7cd936e6cfcbaa03 198 SUPERFAMILY SSF52218 3 178 1.61E-51 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS12135 4d6377e150634f2b7cd936e6cfcbaa03 198 Pfam PF02525 Flavodoxin-like fold 4 170 1.3E-42 T 23-04-2016 IPR003680 Flavodoxin-like fold MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 Pfam PF00994 Probable molybdopterin binding domain 10 149 2.0E-30 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 7 148 1.6E-39 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 SUPERFAMILY SSF53218 5 190 4.19E-50 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 SMART SM00852 9 155 2.6E-24 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 PANTHER PTHR10192 1 190 1.4E-84 T 23-04-2016 MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 71 84 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 MSIP34_RS10980 ad9ae0e6e432db66472f52cce7c62dea 196 Gene3D G3DSA:3.40.980.10 5 190 3.1E-56 T 23-04-2016 IPR001453 MoaB/Mog domain MSIP34_RS08650 0708375da366f8e0fb2b93e822c99402 246 PANTHER PTHR30616:SF3 8 246 2.9E-123 T 23-04-2016 MSIP34_RS08650 0708375da366f8e0fb2b93e822c99402 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 244 8.9E-61 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase MSIP34_RS08650 0708375da366f8e0fb2b93e822c99402 246 Gene3D G3DSA:3.60.140.10 5 244 7.8E-97 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase MSIP34_RS08650 0708375da366f8e0fb2b93e822c99402 246 SUPERFAMILY SSF64438 8 244 2.56E-85 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic MSIP34_RS08650 0708375da366f8e0fb2b93e822c99402 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 243 5.7E-76 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase MSIP34_RS08650 0708375da366f8e0fb2b93e822c99402 246 PANTHER PTHR30616 8 246 2.9E-123 T 23-04-2016 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 SUPERFAMILY SSF51569 3 331 6.15E-101 T 23-04-2016 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 Gene3D G3DSA:3.20.20.70 1 337 9.6E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 331 3.5E-92 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 330 4.1E-91 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 PANTHER PTHR30304 1 351 2.6E-113 T 23-04-2016 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 72 85 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 PIRSF PIRSF001359 1 331 5.4E-81 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 351 7.3E-184 T 23-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 MSIP34_RS02480 99af93c84087e98087cd2d70984b0d9a 361 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 MSIP34_RS04925 2cf1f37782f9b8964b8279b973c059cb 302 PANTHER PTHR30465:SF0 1 301 4.1E-121 T 23-04-2016 MSIP34_RS04925 2cf1f37782f9b8964b8279b973c059cb 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 300 1.4E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04925 2cf1f37782f9b8964b8279b973c059cb 302 SUPERFAMILY SSF161098 85 288 1.83E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04925 2cf1f37782f9b8964b8279b973c059cb 302 PANTHER PTHR30465 1 301 4.1E-121 T 23-04-2016 MSIP34_RS04925 2cf1f37782f9b8964b8279b973c059cb 302 Gene3D G3DSA:1.10.3720.10 84 298 4.9E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS01365 8852d5eb90c6de8c0b2489bd92d66b42 82 PANTHER PTHR12735:SF3 25 82 2.1E-18 T 23-04-2016 MSIP34_RS01365 8852d5eb90c6de8c0b2489bd92d66b42 82 Pfam PF01722 BolA-like protein 24 74 5.5E-19 T 23-04-2016 IPR002634 BolA protein MSIP34_RS01365 8852d5eb90c6de8c0b2489bd92d66b42 82 Gene3D G3DSA:3.30.300.90 1 80 5.8E-27 T 23-04-2016 IPR002634 BolA protein MSIP34_RS01365 8852d5eb90c6de8c0b2489bd92d66b42 82 PANTHER PTHR12735 25 82 2.1E-18 T 23-04-2016 MSIP34_RS01365 8852d5eb90c6de8c0b2489bd92d66b42 82 PIRSF PIRSF003113 1 82 8.2E-24 T 23-04-2016 IPR002634 BolA protein MSIP34_RS01365 8852d5eb90c6de8c0b2489bd92d66b42 82 SUPERFAMILY SSF82657 2 79 4.97E-27 T 23-04-2016 IPR002634 BolA protein MSIP34_RS12940 2037de4ab6f235160390bba3bc215e15 218 Gene3D G3DSA:2.30.110.10 31 148 4.4E-26 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS12940 2037de4ab6f235160390bba3bc215e15 218 SUPERFAMILY SSF50475 33 150 2.36E-17 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS12940 2037de4ab6f235160390bba3bc215e15 218 PANTHER PTHR30212:SF3 8 155 8.6E-27 T 23-04-2016 MSIP34_RS12940 2037de4ab6f235160390bba3bc215e15 218 PANTHER PTHR30212 8 155 8.6E-27 T 23-04-2016 MSIP34_RS12940 2037de4ab6f235160390bba3bc215e15 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 35 127 2.1E-14 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 MSIP34_RS10250 5379b538acb75484defd6edc1408b0cd 164 SUPERFAMILY SSF53335 12 134 7.39E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS10250 5379b538acb75484defd6edc1408b0cd 164 Gene3D G3DSA:3.40.50.150 18 136 2.8E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 SUPERFAMILY SSF52016 411 602 5.57E-59 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 600 43.581 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 PANTHER PTHR21000:SF11 7 361 0.0 T 23-04-2016 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 PANTHER PTHR21000:SF11 396 605 0.0 T 23-04-2016 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 SUPERFAMILY SSF143975 5 410 1.06E-134 T 23-04-2016 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 Pfam PF00920 Dehydratase family 24 597 1.3E-217 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 PANTHER PTHR21000 7 361 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 PANTHER PTHR21000 396 605 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 499 510 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 8 600 5.1E-252 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS01910 5fcfb4bf89f2adf0fe7719e2f4fac7ff 606 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 112 122 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 ProSitePatterns PS00460 Glutathione peroxidases active site. 30 45 - T 23-04-2016 IPR029759 Glutathione peroxidase active site MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 PANTHER PTHR11592:SF40 8 162 6.7E-50 T 23-04-2016 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 PANTHER PTHR11592 8 162 6.7E-50 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 SUPERFAMILY SSF52833 10 161 5.61E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 PRINTS PR01011 Glutathione peroxidase family signature 123 132 5.7E-10 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 PRINTS PR01011 Glutathione peroxidase family signature 28 45 5.7E-10 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 PRINTS PR01011 Glutathione peroxidase family signature 63 79 5.7E-10 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 Gene3D G3DSA:3.40.30.10 9 159 1.5E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 Pfam PF00255 Glutathione peroxidase 10 115 8.6E-30 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 MSIP34_RS08130 6dba6d4961487894dfa671d3951fe44a 162 PIRSF PIRSF000303 2 162 2.6E-54 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 PANTHER PTHR24423 193 478 5.8E-70 T 23-04-2016 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 Gene3D G3DSA:3.30.565.10 322 478 3.3E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 SMART SM00388 252 320 2.8E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 SUPERFAMILY SSF55874 309 476 1.96E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 SUPERFAMILY SSF47384 237 318 1.26E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 6.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 6.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 6.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 6.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 474 1.7E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 Gene3D G3DSA:1.10.287.130 245 315 1.6E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 SMART SM00387 364 475 3.0E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS04510 c8bfc8f80e58965e278ae4a698468abc 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 315 2.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 MSIP34_RS09285 39aa8700828177e00f7d83c37ef0db6f 467 PANTHER PTHR32309 1 444 8.3E-49 T 23-04-2016 MSIP34_RS09285 39aa8700828177e00f7d83c37ef0db6f 467 Pfam PF13807 G-rich domain on putative tyrosine kinase 341 418 9.2E-8 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain MSIP34_RS09285 39aa8700828177e00f7d83c37ef0db6f 467 PANTHER PTHR32309:SF13 1 444 8.3E-49 T 23-04-2016 MSIP34_RS09285 39aa8700828177e00f7d83c37ef0db6f 467 TIGRFAM TIGR03017 EpsF: chain length determinant protein EpsF 1 445 3.2E-198 T 23-04-2016 IPR017468 Chain length determinant protein EpsF MSIP34_RS09285 39aa8700828177e00f7d83c37ef0db6f 467 Pfam PF02706 Chain length determinant protein 2 155 1.4E-16 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 Gene3D G3DSA:1.10.1900.20 55 117 1.5E-28 T 23-04-2016 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 PRINTS PR00062 Ribosomal protein L20 signature 42 71 6.0E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 PRINTS PR00062 Ribosomal protein L20 signature 75 101 6.0E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 PRINTS PR00062 Ribosomal protein L20 signature 12 41 6.0E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 PANTHER PTHR10986:SF12 2 117 7.2E-61 T 23-04-2016 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 SUPERFAMILY SSF74731 2 115 1.31E-48 T 23-04-2016 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.2E-48 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 Pfam PF00453 Ribosomal protein L20 3 108 5.4E-48 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 PANTHER PTHR10986 2 117 7.2E-61 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.86 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 MSIP34_RS03685 cd7b292d66baa2b5f6a2778203084cf9 120 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 6.0E-15 T 23-04-2016 MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 Gene3D G3DSA:3.40.50.720 2 251 3.8E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 250 1.7E-57 T 23-04-2016 MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 193 0.0011 T 23-04-2016 MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.3E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 SUPERFAMILY SSF51735 3 251 2.86E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.7E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.7E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 5.7E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 5.7E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.7E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 5.7E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PANTHER PTHR24322 157 188 2.1E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13695 ce048df50abdc505570f54a7dba4ba1b 252 PANTHER PTHR24322 8 141 2.1E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 Gene3D G3DSA:3.40.50.2000 219 363 1.1E-31 T 23-04-2016 MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 PANTHER PTHR12526 77 395 9.0E-86 T 23-04-2016 MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 PANTHER PTHR12526 1 39 9.0E-86 T 23-04-2016 MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 SUPERFAMILY SSF53756 18 396 1.22E-70 T 23-04-2016 MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 PANTHER PTHR12526:SF375 77 395 9.0E-86 T 23-04-2016 MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 PANTHER PTHR12526:SF375 1 39 9.0E-86 T 23-04-2016 MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 Pfam PF13439 Glycosyltransferase Family 4 97 207 1.7E-7 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS09230 4f7148b234ab547167b84267532e2964 399 Pfam PF00534 Glycosyl transferases group 1 221 367 8.6E-36 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 PANTHER PTHR11751:SF354 10 392 2.8E-120 T 23-04-2016 MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 Pfam PF00155 Aminotransferase class I and II 32 388 3.2E-41 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 SUPERFAMILY SSF53383 2 391 1.31E-82 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 Gene3D G3DSA:3.40.640.10 44 263 2.5E-57 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 PANTHER PTHR11751 10 392 2.8E-120 T 23-04-2016 MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 392 6.7E-187 T 23-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 MSIP34_RS06580 ffe909f82db1cb0063ee28b36272ab86 393 Gene3D G3DSA:3.90.1150.10 264 391 3.4E-20 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PANTHER PTHR30386:SF3 153 442 2.8E-101 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PANTHER PTHR30386:SF3 22 117 2.8E-101 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 421 441 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 363 386 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 306 327 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 421 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 339 363 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 1.7E-54 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 Gene3D G3DSA:2.40.50.100 65 96 8.9E-17 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 Gene3D G3DSA:2.40.50.100 291 325 8.9E-17 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 Pfam PF13533 Biotin-lipoyl like 72 104 9.1E-6 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 Pfam PF13437 HlyD family secretion protein 293 397 5.3E-16 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PANTHER PTHR30386 153 442 2.8E-101 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 PANTHER PTHR30386 22 117 2.8E-101 T 23-04-2016 MSIP34_RS04210 2ab366dcf7909f5aadae2a49fc438c2f 442 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 22 442 4.0E-116 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 Pfam PF00196 Bacterial regulatory proteins, luxR family 264 318 2.7E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 265 279 3.5E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 295 307 3.5E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 279 295 3.5E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 Gene3D G3DSA:1.10.10.10 259 324 8.6E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 SUPERFAMILY SSF46894 256 324 4.76E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS06910 b84be8f3c198369fa147e604afaa8278 348 SMART SM00421 262 319 2.1E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS01120 575611b50f4df6f4e8febe2ba205a830 147 PIRSF PIRSF010312 1 147 6.2E-33 T 23-04-2016 IPR016568 Sulphur oxidation, SoxY MSIP34_RS01120 575611b50f4df6f4e8febe2ba205a830 147 Pfam PF13501 Sulfur oxidation protein SoxY 51 146 3.3E-24 T 23-04-2016 IPR032711 Ig-like SoxY domain MSIP34_RS11580 721dbdc565758a8b9a717404f06e9dbe 136 SUPERFAMILY SSF55961 7 133 1.35E-31 T 23-04-2016 MSIP34_RS11580 721dbdc565758a8b9a717404f06e9dbe 136 Gene3D G3DSA:3.30.530.20 7 133 3.0E-53 T 23-04-2016 IPR023393 START-like domain MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 SUPERFAMILY SSF55347 135 305 1.03E-40 T 23-04-2016 MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 130 6.2E-22 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 PANTHER PTHR22604 1 339 1.6E-82 T 23-04-2016 MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 Gene3D G3DSA:3.40.50.720 2 148 1.3E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 SUPERFAMILY SSF51735 3 162 2.12E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 Gene3D G3DSA:3.30.360.10 149 258 1.1E-37 T 23-04-2016 MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 Gene3D G3DSA:3.30.360.10 290 339 1.1E-37 T 23-04-2016 MSIP34_RS04005 04ff11c36ae8bc16d3e2c777afa70032 341 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 143 247 2.8E-4 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 MSIP34_RS05545 e857b84652ad667cea5536ed7c27e3f9 290 SUPERFAMILY SSF103481 41 134 1.57E-10 T 23-04-2016 MSIP34_RS05545 e857b84652ad667cea5536ed7c27e3f9 290 Pfam PF00892 EamA-like transporter family 12 132 2.6E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS05545 e857b84652ad667cea5536ed7c27e3f9 290 SUPERFAMILY SSF103481 195 288 8.5E-6 T 23-04-2016 MSIP34_RS06780 d6a510cfff533a1dd7f766bea07a4c97 244 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 226 1.4E-12 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS06780 d6a510cfff533a1dd7f766bea07a4c97 244 Gene3D G3DSA:3.60.10.10 2 168 9.6E-12 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS06780 d6a510cfff533a1dd7f766bea07a4c97 244 SUPERFAMILY SSF56219 2 231 4.84E-29 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase MSIP34_RS04855 60f349ce0cebad839431dfb158b9292e 462 SUPERFAMILY SSF75304 3 446 6.67E-118 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS04855 60f349ce0cebad839431dfb158b9292e 462 Gene3D G3DSA:3.90.1300.10 4 448 8.0E-115 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS04855 60f349ce0cebad839431dfb158b9292e 462 PANTHER PTHR11895 1 454 1.4E-191 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS04855 60f349ce0cebad839431dfb158b9292e 462 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 40 451 6.5E-188 T 23-04-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 MSIP34_RS04855 60f349ce0cebad839431dfb158b9292e 462 Pfam PF01425 Amidase 53 437 3.1E-89 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 MSIP34_RS04855 60f349ce0cebad839431dfb158b9292e 462 PANTHER PTHR11895:SF24 1 454 1.4E-191 T 23-04-2016 MSIP34_RS04190 dbcae55734546daf1f017c900e90c514 64 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 MSIP34_RS04190 dbcae55734546daf1f017c900e90c514 64 Gene3D G3DSA:3.30.70.100 3 62 1.4E-18 T 23-04-2016 MSIP34_RS04190 dbcae55734546daf1f017c900e90c514 64 SUPERFAMILY SSF55008 3 63 3.01E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MSIP34_RS04190 dbcae55734546daf1f017c900e90c514 64 Pfam PF00403 Heavy-metal-associated domain 3 61 1.3E-10 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 Gene3D G3DSA:2.40.50.100 186 213 2.1E-11 T 23-04-2016 MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 Gene3D G3DSA:2.40.50.100 81 111 2.1E-11 T 23-04-2016 MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 78 296 1.2E-23 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 PANTHER PTHR30469 7 388 2.0E-126 T 23-04-2016 MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 377 4.2E-66 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 SUPERFAMILY SSF111369 67 300 4.71E-33 T 23-04-2016 MSIP34_RS13775 61a01cd06be5f0c548b57f8e471edb14 389 PANTHER PTHR30469:SF4 7 388 2.0E-126 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Gene3D G3DSA:2.30.42.10 383 471 2.4E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Gene3D G3DSA:2.30.42.10 270 366 1.0E-31 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 SUPERFAMILY SSF50494 93 277 1.51E-65 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 SUPERFAMILY SSF50494 6 45 1.51E-65 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PRINTS PR00834 HtrA/DegQ protease family signature 105 117 5.4E-52 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PRINTS PR00834 HtrA/DegQ protease family signature 126 146 5.4E-52 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 5.4E-52 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 5.4E-52 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 5.4E-52 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 5.4E-52 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 SMART SM00228 382 460 5.6E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 SMART SM00228 268 350 1.4E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 25 465 5.7E-154 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PANTHER PTHR22939:SF98 77 415 1.6E-130 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PANTHER PTHR22939:SF98 23 47 1.6E-130 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 SUPERFAMILY SSF50156 383 469 3.29E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 SUPERFAMILY SSF50156 250 358 1.29E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Pfam PF13180 PDZ domain 269 359 2.8E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Pfam PF13180 PDZ domain 391 469 1.4E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Gene3D G3DSA:2.40.10.10 83 160 4.6E-36 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Gene3D G3DSA:2.40.10.10 19 45 4.6E-36 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Gene3D G3DSA:2.40.10.10 161 269 2.2E-43 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 Pfam PF13365 Trypsin-like peptidase domain 96 229 1.7E-34 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PANTHER PTHR22939 77 415 1.6E-130 T 23-04-2016 MSIP34_RS09025 1ad744780bdb02a2b96fba35158e4057 473 PANTHER PTHR22939 23 47 1.6E-130 T 23-04-2016 MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 SMART SM00479 2 174 9.9E-52 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 228 1.9E-90 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 Pfam PF00929 Exonuclease 4 165 1.0E-34 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 Gene3D G3DSA:3.30.420.10 1 174 2.4E-65 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 PANTHER PTHR30231 1 228 2.0E-98 T 23-04-2016 MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 PANTHER PTHR30231:SF0 1 228 2.0E-98 T 23-04-2016 MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 203 2.0E-64 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS07360 fc54bca19d3f4a7f4aa2e0433937634d 234 SUPERFAMILY SSF53098 1 176 2.0E-55 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS08135 d2e5c78919c97cb87c7088b25b7a5ade 654 PANTHER PTHR23028:SF53 8 445 2.7E-67 T 23-04-2016 MSIP34_RS08135 d2e5c78919c97cb87c7088b25b7a5ade 654 Pfam PF01757 Acyltransferase family 9 336 1.5E-29 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 MSIP34_RS08135 d2e5c78919c97cb87c7088b25b7a5ade 654 PANTHER PTHR23028 8 445 2.7E-67 T 23-04-2016 MSIP34_RS00535 ee2ba9356f53f8c178c043ca7fb22d4c 248 SMART SM01007 24 199 0.0042 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS00535 ee2ba9356f53f8c178c043ca7fb22d4c 248 Gene3D G3DSA:3.40.225.10 47 220 7.6E-14 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS00535 ee2ba9356f53f8c178c043ca7fb22d4c 248 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 35 197 3.6E-11 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS00535 ee2ba9356f53f8c178c043ca7fb22d4c 248 SUPERFAMILY SSF53639 26 223 3.34E-27 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF00562 RNA polymerase Rpb2, domain 6 743 1312 3.8E-158 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF10385 RNA polymerase beta subunit external 1 domain 616 681 2.9E-24 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:2.40.270.10 818 845 1.2E-86 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:2.40.270.10 1098 1290 1.2E-86 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF04560 RNA polymerase Rpb2, domain 7 1314 1388 1.2E-26 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF04563 RNA polymerase beta subunit 26 525 4.6E-41 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 SUPERFAMILY SSF64484 447 964 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 SUPERFAMILY SSF64484 1077 1388 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 SUPERFAMILY SSF64484 348 416 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 SUPERFAMILY SSF64484 12 230 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1101 1113 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1386 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856 768 955 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856 1218 1390 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856 5 234 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856 1072 1166 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856 448 750 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856 345 421 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856:SF20 768 955 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856:SF20 1218 1390 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856:SF20 5 234 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856:SF20 1072 1166 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856:SF20 448 750 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 PANTHER PTHR20856:SF20 345 421 0.0 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1390 12.266 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF04565 RNA polymerase Rpb2, domain 3 538 605 1.2E-30 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF04561 RNA polymerase Rpb2, domain 2 445 479 6.7E-7 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 227 1.5E-7 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:2.40.50.100 740 817 1.8E-27 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:3.90.1100.10 470 616 6.7E-147 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:3.90.1100.10 684 738 6.7E-147 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:3.90.1100.10 20 155 6.7E-147 T 23-04-2016 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:2.30.150.10 617 681 1.3E-25 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:2.40.50.150 853 962 1.5E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:2.40.50.150 1083 1097 1.5E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:3.90.1110.10 351 469 1.0E-62 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS01545 aca086ca321635d19e10e005677c984d 1390 Gene3D G3DSA:3.90.1110.10 157 234 1.0E-62 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 MSIP34_RS07845 c66ddb91e07da11a6ab62ece33997a3c 247 SUPERFAMILY SSF110997 173 244 1.44E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS07845 c66ddb91e07da11a6ab62ece33997a3c 247 Gene3D G3DSA:3.30.70.1070 172 245 7.2E-13 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS07845 c66ddb91e07da11a6ab62ece33997a3c 247 Pfam PF05036 Sporulation related domain 173 245 3.7E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS02245 c804f55a96b384b8120b94c57863a0ac 91 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 4.2E-24 T 23-04-2016 IPR011893 Selenoprotein, Rdx type MSIP34_RS02245 c804f55a96b384b8120b94c57863a0ac 91 Gene3D G3DSA:3.40.30.10 2 91 1.6E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02245 c804f55a96b384b8120b94c57863a0ac 91 Pfam PF10262 Rdx family 6 78 6.2E-32 T 23-04-2016 IPR011893 Selenoprotein, Rdx type MSIP34_RS02245 c804f55a96b384b8120b94c57863a0ac 91 PANTHER PTHR36417:SF2 5 91 6.2E-38 T 23-04-2016 MSIP34_RS02245 c804f55a96b384b8120b94c57863a0ac 91 SUPERFAMILY SSF52833 4 87 6.04E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02245 c804f55a96b384b8120b94c57863a0ac 91 PANTHER PTHR36417 5 91 6.2E-38 T 23-04-2016 MSIP34_RS04995 f9af264dff50dc875ec097e584522579 358 PANTHER PTHR22893 1 358 1.0E-179 T 23-04-2016 MSIP34_RS04995 f9af264dff50dc875ec097e584522579 358 Gene3D G3DSA:3.20.20.70 1 354 3.0E-132 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS04995 f9af264dff50dc875ec097e584522579 358 PANTHER PTHR22893:SF14 1 358 1.0E-179 T 23-04-2016 MSIP34_RS04995 f9af264dff50dc875ec097e584522579 358 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 334 7.7E-85 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 MSIP34_RS04995 f9af264dff50dc875ec097e584522579 358 SUPERFAMILY SSF51395 1 356 1.1E-123 T 23-04-2016 MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 PIRSF PIRSF000485 1 482 1.9E-165 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 SUPERFAMILY SSF53271 251 484 8.65E-73 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 PANTHER PTHR11907:SF0 1 479 2.1E-252 T 23-04-2016 MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 467 45.355 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 Gene3D G3DSA:3.40.50.2020 272 445 3.9E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 PANTHER PTHR11907 1 479 2.1E-252 T 23-04-2016 MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 Pfam PF00156 Phosphoribosyl transferase domain 282 394 7.4E-7 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 Pfam PF13537 Glutamine amidotransferase domain 80 213 1.6E-14 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 SUPERFAMILY SSF56235 2 258 1.2E-70 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 Gene3D G3DSA:3.60.20.10 2 258 7.6E-64 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS07835 9ea7c36b8354da7463a6ed24fbc16106 512 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 465 5.7E-163 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 SMART SM00100 296 416 1.8E-14 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 Pfam PF00027 Cyclic nucleotide-binding domain 322 402 2.1E-16 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 Pfam PF03631 Virulence factor BrkB 46 291 6.6E-35 T 23-04-2016 IPR017039 Virulence factor BrkB MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 PANTHER PTHR30213 6 289 6.0E-24 T 23-04-2016 MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 SUPERFAMILY SSF51206 300 424 1.57E-25 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 39 291 5.1E-21 T 23-04-2016 IPR017039 Virulence factor BrkB MSIP34_RS11820 db2160ba6c3afe0a12990df44dd54d39 426 Gene3D G3DSA:2.60.120.10 300 423 5.5E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PANTHER PTHR24321:SF6 11 253 1.8E-38 T 23-04-2016 MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PANTHER PTHR24321 11 253 1.8E-38 T 23-04-2016 MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 SUPERFAMILY SSF51735 9 253 8.1E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 8.8E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 8.8E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 8.8E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 Gene3D G3DSA:3.40.50.720 4 253 6.5E-70 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 252 4.0E-51 T 23-04-2016 MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 4.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 4.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.8E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS13970 ae00fed2fe44ecc9f47ce407107756fb 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 173 0.0035 T 23-04-2016 MSIP34_RS11535 4d1816275685ae02adc3041bc688cb2b 295 PANTHER PTHR12715 7 287 1.1E-51 T 23-04-2016 MSIP34_RS11535 4d1816275685ae02adc3041bc688cb2b 295 SUPERFAMILY SSF103481 186 285 1.7E-8 T 23-04-2016 MSIP34_RS11535 4d1816275685ae02adc3041bc688cb2b 295 SUPERFAMILY SSF103481 40 139 4.84E-16 T 23-04-2016 MSIP34_RS11535 4d1816275685ae02adc3041bc688cb2b 295 Pfam PF00892 EamA-like transporter family 148 281 3.0E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS11535 4d1816275685ae02adc3041bc688cb2b 295 Pfam PF00892 EamA-like transporter family 6 136 1.3E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 291 4.2E-42 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 SUPERFAMILY SSF111369 75 293 3.14E-21 T 23-04-2016 MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 PANTHER PTHR30097:SF4 65 368 1.6E-69 T 23-04-2016 MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 PANTHER PTHR30097 65 368 1.6E-69 T 23-04-2016 MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 53 365 5.1E-54 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 Gene3D G3DSA:2.40.50.100 184 217 1.6E-12 T 23-04-2016 MSIP34_RS06035 d08169ce094eaf7d0ac8244ad7173917 372 Gene3D G3DSA:2.40.50.100 76 109 1.6E-12 T 23-04-2016 MSIP34_RS04415 561d05018b4c8c75dc027c4c54920c45 341 SUPERFAMILY SSF53300 47 196 1.67E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04415 561d05018b4c8c75dc027c4c54920c45 341 SMART SM00327 45 227 1.3E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04415 561d05018b4c8c75dc027c4c54920c45 341 Gene3D G3DSA:3.40.50.410 49 195 3.8E-4 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04415 561d05018b4c8c75dc027c4c54920c45 341 Pfam PF13519 von Willebrand factor type A domain 49 165 4.0E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS11660 7f58767dcba405ca084d254df5519e09 207 Pfam PF03350 Uncharacterized protein family, UPF0114 12 140 3.8E-32 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 MSIP34_RS11660 7f58767dcba405ca084d254df5519e09 207 PANTHER PTHR31721 1 182 2.7E-34 T 23-04-2016 MSIP34_RS11660 7f58767dcba405ca084d254df5519e09 207 PIRSF PIRSF026509 1 187 5.9E-42 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 MSIP34_RS08485 9a9cdc1c48d4629ae80221cf8394c916 423 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 239 416 6.3E-59 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 MSIP34_RS08485 9a9cdc1c48d4629ae80221cf8394c916 423 SUPERFAMILY SSF55073 231 416 2.67E-64 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS08485 9a9cdc1c48d4629ae80221cf8394c916 423 Gene3D G3DSA:3.30.70.1230 235 420 8.2E-70 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 MSIP34_RS08485 9a9cdc1c48d4629ae80221cf8394c916 423 ProSitePatterns PS00452 Guanylate cyclase signature. 349 372 - T 23-04-2016 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site GO:0009190|GO:0016849|GO:0035556 MSIP34_RS08485 9a9cdc1c48d4629ae80221cf8394c916 423 PANTHER PTHR11920 187 406 4.2E-88 T 23-04-2016 MSIP34_RS08485 9a9cdc1c48d4629ae80221cf8394c916 423 SMART SM00044 209 398 3.7E-73 T 23-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 MSIP34_RS01045 2bb23ef45e412d5da9bbc3a6cf80ad9a 135 Pfam PF03610 PTS system fructose IIA component 3 104 7.3E-16 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 MSIP34_RS01045 2bb23ef45e412d5da9bbc3a6cf80ad9a 135 PANTHER PTHR33799 2 130 1.7E-24 T 23-04-2016 MSIP34_RS01045 2bb23ef45e412d5da9bbc3a6cf80ad9a 135 Gene3D G3DSA:3.40.50.510 1 129 7.4E-35 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 MSIP34_RS01045 2bb23ef45e412d5da9bbc3a6cf80ad9a 135 SUPERFAMILY SSF53062 1 127 9.55E-30 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 112 129 3.3E-5 T 23-04-2016 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 130 149 3.3E-5 T 23-04-2016 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 150 170 3.3E-5 T 23-04-2016 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PRINTS PR01021 OMPA domain signature 97 112 1.5E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PRINTS PR01021 OMPA domain signature 112 128 1.5E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PRINTS PR01021 OMPA domain signature 67 89 1.5E-9 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PANTHER PTHR30128:SF12 34 168 3.9E-41 T 23-04-2016 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 Pfam PF00691 OmpA family 66 161 1.5E-21 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 PANTHER PTHR30128 34 168 3.9E-41 T 23-04-2016 MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 Gene3D G3DSA:3.30.1330.60 54 168 4.8E-34 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS02020 81c2f107691b32dbcaa3c85dfbb1c80b 170 SUPERFAMILY SSF103088 53 167 9.81E-33 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 Gene3D G3DSA:3.40.30.10 5 161 4.4E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 Pfam PF00578 AhpC/TSA family 5 138 1.1E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 Gene3D G3DSA:3.30.1020.10 162 194 6.7E-11 T 23-04-2016 MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 PIRSF PIRSF000239 1 198 9.7E-57 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 PANTHER PTHR10681 1 194 1.1E-84 T 23-04-2016 MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 7.3E-11 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS07815 5354d824affaf8bc73454b12cb8aba79 200 SUPERFAMILY SSF52833 3 193 9.74E-65 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS12075 965dd35d31b789590f5fce285eb73f6d 128 PANTHER PTHR30558 1 128 6.2E-26 T 23-04-2016 MSIP34_RS12075 965dd35d31b789590f5fce285eb73f6d 128 PANTHER PTHR30558:SF7 1 128 6.2E-26 T 23-04-2016 MSIP34_RS12075 965dd35d31b789590f5fce285eb73f6d 128 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 120 1.8E-24 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 MSIP34_RS01335 5418788df275dd2bd5ac72c5d1e389e9 263 PANTHER PTHR30188 1 261 9.3E-102 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 MSIP34_RS01335 5418788df275dd2bd5ac72c5d1e389e9 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 26 261 1.4E-86 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria MSIP34_RS01335 5418788df275dd2bd5ac72c5d1e389e9 263 PANTHER PTHR30188:SF4 1 261 9.3E-102 T 23-04-2016 MSIP34_RS01335 5418788df275dd2bd5ac72c5d1e389e9 263 Pfam PF02405 Permease MlaE 48 258 4.1E-76 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 MSIP34_RS02575 1c5df5520259469041c356567781c629 147 Pfam PF04314 Protein of unknown function (DUF461) 28 129 1.0E-35 T 23-04-2016 IPR007410 DR1885-like metal-binding protein MSIP34_RS02575 1c5df5520259469041c356567781c629 147 PANTHER PTHR36302 12 129 6.9E-25 T 23-04-2016 MSIP34_RS02575 1c5df5520259469041c356567781c629 147 SUPERFAMILY SSF110087 5 130 1.96E-40 T 23-04-2016 IPR007410 DR1885-like metal-binding protein MSIP34_RS02575 1c5df5520259469041c356567781c629 147 PANTHER PTHR36302:SF1 12 129 6.9E-25 T 23-04-2016 MSIP34_RS04300 cda555d99d5bdb3466af78ddbac2afb4 187 Pfam PF04350 Pilus assembly protein, PilO 50 177 1.4E-7 T 23-04-2016 IPR007445 Pilus assembly protein, PilO MSIP34_RS04300 cda555d99d5bdb3466af78ddbac2afb4 187 Gene3D G3DSA:3.30.70.60 86 184 1.1E-7 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 PANTHER PTHR11751 121 481 1.4E-96 T 23-04-2016 MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 Gene3D G3DSA:1.10.10.10 10 83 4.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 PANTHER PTHR11751:SF10 121 481 1.4E-96 T 23-04-2016 MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 SMART SM00345 23 82 8.4E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 Pfam PF00155 Aminotransferase class I and II 152 400 2.6E-16 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 82 3.9E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 SUPERFAMILY SSF53383 122 481 5.0E-72 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 SUPERFAMILY SSF46785 13 85 8.16E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS13385 84709043572d1b6ad5550db2103485c2 488 Gene3D G3DSA:3.40.640.10 152 367 3.1E-50 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 TIGRFAM TIGR00077 lspA: signal peptidase II 10 150 5.5E-40 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 PANTHER PTHR33695 1 148 4.1E-53 T 23-04-2016 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 1.1E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 128 144 1.1E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 1.1E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 PANTHER PTHR33695:SF1 1 148 4.1E-53 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 Pfam PF01252 Signal peptidase (SPase) II 9 147 6.2E-37 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 15.954 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS02660 cd57ebd1c845ebae109b055d1e188860 151 ProSitePatterns PS00855 Signal peptidases II signature. 95 107 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 Pfam PF01593 Flavin containing amine oxidoreductase 11 267 4.6E-17 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 SUPERFAMILY SSF51905 1 298 3.02E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 SUPERFAMILY SSF51905 378 405 3.02E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 PANTHER PTHR10742 1 409 1.7E-185 T 23-04-2016 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 PANTHER PTHR10742:SF275 1 409 1.7E-185 T 23-04-2016 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 Gene3D G3DSA:3.50.50.60 138 139 5.7E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 Gene3D G3DSA:3.50.50.60 198 299 5.7E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06630 2716442855f26da2c54bced71ec3caee 412 Gene3D G3DSA:3.50.50.60 1 93 5.7E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 113 2.7E-53 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.72 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 Gene3D G3DSA:1.10.8.50 1 71 9.8E-30 T 23-04-2016 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.8E-33 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 PANTHER PTHR10871 1 116 4.4E-66 T 23-04-2016 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 Gene3D G3DSA:4.10.910.10 72 119 1.6E-27 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 PIRSF PIRSF002134 1 120 3.2E-44 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01690 02acc7021197f25a0fec31061eb15459 120 SUPERFAMILY SSF46946 2 112 6.62E-46 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 MSIP34_RS12985 c5eb71a9cb737bc87706dc6e215a2722 88 Pfam PF04380 Membrane fusogenic activity 2 74 5.5E-15 T 23-04-2016 IPR007475 Membrane fusogenic activity MSIP34_RS02950 14ccf19c3ca2fb3980e47b39a1304715 329 Gene3D G3DSA:3.90.1200.10 90 318 5.3E-74 T 23-04-2016 MSIP34_RS02950 14ccf19c3ca2fb3980e47b39a1304715 329 PANTHER PTHR33540:SF1 9 323 2.0E-116 T 23-04-2016 MSIP34_RS02950 14ccf19c3ca2fb3980e47b39a1304715 329 Pfam PF01636 Phosphotransferase enzyme family 23 242 1.6E-31 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase MSIP34_RS02950 14ccf19c3ca2fb3980e47b39a1304715 329 PANTHER PTHR33540 9 323 2.0E-116 T 23-04-2016 MSIP34_RS02950 14ccf19c3ca2fb3980e47b39a1304715 329 Gene3D G3DSA:3.30.200.20 2 89 1.0E-33 T 23-04-2016 MSIP34_RS02950 14ccf19c3ca2fb3980e47b39a1304715 329 SUPERFAMILY SSF56112 5 316 1.36E-60 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 414 2.5E-27 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 SUPERFAMILY SSF102735 1 131 1.7E-38 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 TIGRFAM TIGR00115 tig: trigger factor 11 414 6.1E-121 T 23-04-2016 IPR005215 Trigger factor GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 2.4E-38 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 Gene3D G3DSA:1.10.3120.10 203 391 2.0E-49 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 Gene3D G3DSA:3.30.70.1050 1 118 7.0E-37 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 Hamap MF_00303 Trigger factor [tig]. 1 420 19.087 T 23-04-2016 IPR005215 Trigger factor GO:0015031 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 SUPERFAMILY SSF54534 132 247 1.07E-22 T 23-04-2016 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 SUPERFAMILY SSF109998 248 431 3.01E-42 T 23-04-2016 IPR027304 Trigger factor/SurA domain MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 PANTHER PTHR30560 1 432 1.7E-92 T 23-04-2016 MSIP34_RS07440 eb358771c9b8a69079c955445c384ad2 433 PIRSF PIRSF003095 1 433 1.6E-106 T 23-04-2016 IPR005215 Trigger factor GO:0015031 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 131 2.5E-25 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 SUPERFAMILY SSF51971 355 468 6.71E-11 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PRINTS PR00419 Adrenodoxin reductase family signature 284 298 8.2E-21 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 8.2E-21 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.2E-21 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.2E-21 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 SUPERFAMILY SSF46548 2 154 6.02E-40 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 Gene3D G3DSA:3.40.50.720 147 233 2.4E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 Gene3D G3DSA:3.40.50.720 402 473 2.4E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 Gene3D G3DSA:3.50.50.60 234 398 2.5E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 SUPERFAMILY SSF51971 142 398 3.77E-69 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 474 4.8E-224 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 Gene3D G3DSA:1.10.1060.10 3 146 2.4E-42 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PANTHER PTHR11938 36 317 2.9E-146 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PANTHER PTHR11938 333 468 2.9E-146 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PANTHER PTHR11938:SF75 36 317 2.9E-146 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 PANTHER PTHR11938:SF75 333 468 2.9E-146 T 23-04-2016 MSIP34_RS14055 5a538d28ae3cd25dcdf348a4082f97f2 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 456 2.8E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 8.5E-72 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 Pfam PF01895 PhoU domain 126 211 4.8E-16 T 23-04-2016 IPR026022 PhoU domain MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 Pfam PF01895 PhoU domain 22 108 1.2E-19 T 23-04-2016 IPR026022 PhoU domain MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 PIRSF PIRSF003107 4 225 1.7E-65 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 Gene3D G3DSA:1.20.58.220 6 117 1.5E-34 T 23-04-2016 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 PANTHER PTHR10010:SF14 4 231 1.2E-72 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 Gene3D G3DSA:1.20.58.220 125 232 6.7E-33 T 23-04-2016 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 PANTHER PTHR10010 4 231 1.2E-72 T 23-04-2016 MSIP34_RS00875 0ea66d020a7f0fd60eb33ce6939864d4 235 SUPERFAMILY SSF109755 8 229 6.28E-71 T 23-04-2016 MSIP34_RS08370 652f7589957564b4ca45722550dc97df 81 SUPERFAMILY SSF47413 19 72 3.77E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS08370 652f7589957564b4ca45722550dc97df 81 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 13 76 1.7E-21 T 23-04-2016 IPR031856 Putative bacterial antitoxin YdaS MSIP34_RS08370 652f7589957564b4ca45722550dc97df 81 Gene3D G3DSA:1.10.260.40 12 78 2.7E-20 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 5 376 47.787 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 SUPERFAMILY SSF52317 155 375 1.12E-61 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 SMART SM01097 5 135 4.4E-87 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 Gene3D G3DSA:3.50.30.20 6 145 1.0E-60 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 262 273 1.0E-9 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 1.0E-9 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.0E-9 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 7 134 4.8E-51 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 SUPERFAMILY SSF52021 6 151 7.45E-57 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 304 315 2.9E-40 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 262 278 2.9E-40 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 279 296 2.9E-40 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 2.9E-40 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 192 206 2.9E-40 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 PANTHER PTHR11405 5 378 5.1E-232 T 23-04-2016 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 Pfam PF00117 Glutamine amidotransferase class-I 195 370 7.0E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 Gene3D G3DSA:3.40.50.880 155 375 3.5E-79 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS09505 38bcf550b713a2e1ff9642a200472af4 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 7 374 4.9E-145 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 MSIP34_RS05345 135642997884824ceba6ac71b31f34a7 100 Pfam PF08895 Domain of unknown function (DUF1840) 1 99 4.6E-26 T 23-04-2016 IPR014991 Protein of unknown function DUF1840 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Pfam PF02321 Outer membrane efflux protein 279 461 1.5E-29 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Pfam PF02321 Outer membrane efflux protein 65 254 7.4E-29 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 SUPERFAMILY SSF56954 5 465 1.15E-113 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Gene3D G3DSA:1.20.1600.10 352 465 9.7E-101 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Gene3D G3DSA:1.20.1600.10 142 314 9.7E-101 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Gene3D G3DSA:1.20.1600.10 54 90 9.7E-101 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 PANTHER PTHR30203:SF15 10 465 9.1E-174 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 465 7.7E-132 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 PANTHER PTHR30203 10 465 9.1E-174 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Gene3D G3DSA:2.20.200.10 100 141 1.0E-24 T 23-04-2016 MSIP34_RS13390 d75ec9a518eb56249034f67531b7cf82 467 Gene3D G3DSA:2.20.200.10 315 350 1.0E-24 T 23-04-2016 MSIP34_RS01420 ebb2bd2546189307163edf15b12cc2c7 130 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 31 105 4.5E-36 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 MSIP34_RS01420 ebb2bd2546189307163edf15b12cc2c7 130 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 54 108 6.0E-26 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 MSIP34_RS01420 ebb2bd2546189307163edf15b12cc2c7 130 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 5 109 32.205 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 MSIP34_RS01420 ebb2bd2546189307163edf15b12cc2c7 130 SUPERFAMILY SSF141734 3 119 1.96E-49 T 23-04-2016 MSIP34_RS01420 ebb2bd2546189307163edf15b12cc2c7 130 PANTHER PTHR21256 4 120 1.2E-59 T 23-04-2016 MSIP34_RS05065 b0751e4a5778181d64a790c8f4adacc0 232 Gene3D G3DSA:1.10.10.10 4 49 1.5E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05065 b0751e4a5778181d64a790c8f4adacc0 232 SUPERFAMILY SSF51306 134 223 2.09E-14 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C MSIP34_RS05065 b0751e4a5778181d64a790c8f4adacc0 232 Gene3D G3DSA:2.10.109.10 116 223 4.0E-11 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain MSIP34_RS05065 b0751e4a5778181d64a790c8f4adacc0 232 PANTHER PTHR40661 131 232 3.8E-13 T 23-04-2016 MSIP34_RS05065 b0751e4a5778181d64a790c8f4adacc0 232 SUPERFAMILY SSF46955 3 58 8.51E-8 T 23-04-2016 IPR009061 Putative DNA-binding domain MSIP34_RS05065 b0751e4a5778181d64a790c8f4adacc0 232 Pfam PF00717 Peptidase S24-like 141 200 2.7E-7 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 Pfam PF02514 CobN/Magnesium Chelatase 591 1298 1.9E-185 T 23-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 Pfam PF02514 CobN/Magnesium Chelatase 170 502 4.6E-49 T 23-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 PANTHER PTHR23304 302 473 6.7E-196 T 23-04-2016 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 PANTHER PTHR23304 1066 1302 6.7E-196 T 23-04-2016 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 PANTHER PTHR23304 569 1024 6.7E-196 T 23-04-2016 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 PANTHER PTHR23304:SF113 302 473 6.7E-196 T 23-04-2016 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 PANTHER PTHR23304:SF113 1066 1302 6.7E-196 T 23-04-2016 MSIP34_RS00800 ad3b2366b2f72364f805315a95749dd9 1446 PANTHER PTHR23304:SF113 569 1024 6.7E-196 T 23-04-2016 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 Gene3D G3DSA:3.20.10.10 132 293 1.5E-61 T 23-04-2016 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 ProSitePatterns PS00770 Aminotransferases class-IV signature. 192 220 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 Pfam PF01063 Amino-transferase class IV 34 264 4.6E-56 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 SUPERFAMILY SSF56752 1 301 6.8E-106 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 9 304 1.3E-137 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 PANTHER PTHR11825 7 303 8.2E-117 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 PANTHER PTHR11825:SF7 7 303 8.2E-117 T 23-04-2016 MSIP34_RS10780 53d9460f8479c6c8d88911c3bbe3038f 304 Gene3D G3DSA:3.30.470.10 6 128 1.1E-40 T 23-04-2016 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 SUPERFAMILY SSF48498 75 179 5.63E-6 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 5.8E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 SUPERFAMILY SSF46689 3 72 2.0E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.3E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.3E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 Gene3D G3DSA:1.10.357.10 3 177 1.0E-28 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 PANTHER PTHR30328:SF4 4 180 5.5E-23 T 23-04-2016 MSIP34_RS13210 06111a247aa0c80c1443e947271b894f 184 PANTHER PTHR30328 4 180 5.5E-23 T 23-04-2016 MSIP34_RS05905 48ae75fc7d748a9da4b3795e3bc7575e 242 PANTHER PTHR37314:SF1 28 240 1.2E-29 T 23-04-2016 MSIP34_RS05905 48ae75fc7d748a9da4b3795e3bc7575e 242 Pfam PF06912 Protein of unknown function (DUF1275) 28 235 2.0E-31 T 23-04-2016 IPR010699 Protein of unknown function DUF1275 MSIP34_RS05905 48ae75fc7d748a9da4b3795e3bc7575e 242 PANTHER PTHR37314 28 240 1.2E-29 T 23-04-2016 MSIP34_RS06415 a15389101faf10b432066585c73c20a1 257 SUPERFAMILY SSF54427 1 108 7.25E-17 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS06415 a15389101faf10b432066585c73c20a1 257 Gene3D G3DSA:3.10.450.50 42 106 2.7E-5 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS06415 a15389101faf10b432066585c73c20a1 257 Gene3D G3DSA:3.10.450.50 130 238 4.8E-7 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS06415 a15389101faf10b432066585c73c20a1 257 SUPERFAMILY SSF54427 131 253 2.37E-21 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS06415 a15389101faf10b432066585c73c20a1 257 Pfam PF12680 SnoaL-like domain 138 235 4.0E-9 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain MSIP34_RS00165 83a62692195548536a0e477c85b81c7a 267 Pfam PF02602 Uroporphyrinogen-III synthase HemD 27 254 2.5E-45 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00165 83a62692195548536a0e477c85b81c7a 267 PANTHER PTHR38042:SF1 9 266 1.2E-54 T 23-04-2016 MSIP34_RS00165 83a62692195548536a0e477c85b81c7a 267 Gene3D G3DSA:3.40.50.10090 11 130 5.3E-22 T 23-04-2016 MSIP34_RS00165 83a62692195548536a0e477c85b81c7a 267 Gene3D G3DSA:3.40.50.10090 136 256 9.3E-13 T 23-04-2016 MSIP34_RS00165 83a62692195548536a0e477c85b81c7a 267 SUPERFAMILY SSF69618 14 256 1.96E-55 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 MSIP34_RS00165 83a62692195548536a0e477c85b81c7a 267 PANTHER PTHR38042 9 266 1.2E-54 T 23-04-2016 MSIP34_RS01125 20ea91dace693db43a13779ac4b26b22 105 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 6 101 1.3E-36 T 23-04-2016 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ MSIP34_RS01125 20ea91dace693db43a13779ac4b26b22 105 Gene3D G3DSA:2.60.40.10 5 103 2.1E-32 T 23-04-2016 IPR013783 Immunoglobulin-like fold MSIP34_RS01125 20ea91dace693db43a13779ac4b26b22 105 Pfam PF08770 Sulphur oxidation protein SoxZ 7 100 3.6E-35 T 23-04-2016 IPR014880 Sulphur oxidation protein SoxZ MSIP34_RS01125 20ea91dace693db43a13779ac4b26b22 105 SUPERFAMILY SSF81296 2 102 3.08E-29 T 23-04-2016 IPR014756 Immunoglobulin E-set MSIP34_RS04135 4224c9b4ddc8fcc0fd2806e510af72c1 121 Pfam PF00072 Response regulator receiver domain 5 116 8.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04135 4224c9b4ddc8fcc0fd2806e510af72c1 121 Gene3D G3DSA:3.40.50.2300 3 120 2.1E-36 T 23-04-2016 MSIP34_RS04135 4224c9b4ddc8fcc0fd2806e510af72c1 121 SMART SM00448 3 116 9.7E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS04135 4224c9b4ddc8fcc0fd2806e510af72c1 121 SUPERFAMILY SSF52172 3 120 1.85E-36 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS04135 4224c9b4ddc8fcc0fd2806e510af72c1 121 PANTHER PTHR26402 3 120 9.8E-40 T 23-04-2016 MSIP34_RS00545 5260bba9be5ef26aeadabad769f9b739 367 PANTHER PTHR30024 1 354 2.6E-19 T 23-04-2016 MSIP34_RS00545 5260bba9be5ef26aeadabad769f9b739 367 Gene3D G3DSA:3.40.190.10 129 252 1.6E-16 T 23-04-2016 MSIP34_RS00545 5260bba9be5ef26aeadabad769f9b739 367 Pfam PF09084 NMT1/THI5 like 69 259 2.1E-13 T 23-04-2016 IPR015168 SsuA/THI5-like MSIP34_RS00545 5260bba9be5ef26aeadabad769f9b739 367 SUPERFAMILY SSF53850 63 270 2.3E-31 T 23-04-2016 MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 Pfam PF05036 Sporulation related domain 251 321 1.8E-15 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 Gene3D G3DSA:3.30.70.1070 251 322 1.4E-17 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 PANTHER PTHR34183:SF1 53 323 1.7E-80 T 23-04-2016 MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 SUPERFAMILY SSF110997 251 321 1.57E-14 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 Gene3D G3DSA:2.40.40.10 142 187 1.2E-4 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 PANTHER PTHR34183 53 323 1.7E-80 T 23-04-2016 MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 105 197 2.6E-40 T 23-04-2016 IPR012997 Rare lipoprotein A MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 Pfam PF03330 Lytic transglycolase 103 190 1.0E-23 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain MSIP34_RS12765 f2c41da509b384b103ab3b52c54032fe 323 SUPERFAMILY SSF50685 97 184 1.22E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 3.3E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 3.3E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 3.3E-18 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 Pfam PF00364 Biotin-requiring enzyme 76 149 6.2E-24 T 23-04-2016 IPR000089 Biotin/lipoyl attachment MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 149 7.7E-57 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 SUPERFAMILY SSF51230 74 149 3.4E-24 T 23-04-2016 IPR011053 Single hybrid motif MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 Gene3D G3DSA:2.40.50.100 74 149 6.4E-31 T 23-04-2016 MSIP34_RS00120 e228dbb44a3cbd983ed322c704ff0dcb 150 PANTHER PTHR23151 1 149 3.9E-47 T 23-04-2016 MSIP34_RS12515 94ee4ec217ceb8842abb023efe97076a 275 Gene3D G3DSA:1.10.3150.10 5 262 7.9E-71 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS12515 94ee4ec217ceb8842abb023efe97076a 275 PANTHER PTHR33525 5 275 3.4E-52 T 23-04-2016 MSIP34_RS12515 94ee4ec217ceb8842abb023efe97076a 275 PANTHER PTHR33525:SF3 5 275 3.4E-52 T 23-04-2016 MSIP34_RS12515 94ee4ec217ceb8842abb023efe97076a 275 TIGRFAM TIGR00277 HDIG: HDIG domain 108 202 1.9E-9 T 23-04-2016 IPR006675 HDIG domain MSIP34_RS12515 94ee4ec217ceb8842abb023efe97076a 275 SUPERFAMILY SSF109604 5 262 5.61E-64 T 23-04-2016 MSIP34_RS12515 94ee4ec217ceb8842abb023efe97076a 275 Pfam PF08668 HDOD domain 14 207 4.4E-56 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS00540 335398971e05f8416d68a9851e2377e9 363 Pfam PF09084 NMT1/THI5 like 90 277 2.9E-7 T 23-04-2016 IPR015168 SsuA/THI5-like MSIP34_RS00540 335398971e05f8416d68a9851e2377e9 363 SUPERFAMILY SSF53850 86 295 3.56E-15 T 23-04-2016 MSIP34_RS00540 335398971e05f8416d68a9851e2377e9 363 Gene3D G3DSA:3.40.190.10 108 265 3.0E-22 T 23-04-2016 MSIP34_RS01235 ace957517d6c4bfba3e4e913b8802af2 141 PANTHER PTHR36115:SF2 11 132 3.1E-22 T 23-04-2016 MSIP34_RS01235 ace957517d6c4bfba3e4e913b8802af2 141 Pfam PF06271 RDD family 8 128 1.1E-20 T 23-04-2016 IPR010432 RDD MSIP34_RS01235 ace957517d6c4bfba3e4e913b8802af2 141 PANTHER PTHR36115 11 132 3.1E-22 T 23-04-2016 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 PANTHER PTHR11236 1 455 1.2E-168 T 23-04-2016 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 SUPERFAMILY SSF56322 12 449 1.31E-149 T 23-04-2016 IPR005801 ADC synthase GO:0009058 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 Gene3D G3DSA:3.60.120.10 8 450 2.9E-161 T 23-04-2016 IPR005801 ADC synthase GO:0009058 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 Pfam PF00425 chorismate binding enzyme 188 441 1.6E-100 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 144 6.2E-28 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 PRINTS PR00095 Anthranilate synthase component I signature 303 316 6.1E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 PRINTS PR00095 Anthranilate synthase component I signature 398 412 6.1E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 PRINTS PR00095 Anthranilate synthase component I signature 289 302 6.1E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 PRINTS PR00095 Anthranilate synthase component I signature 383 397 6.1E-19 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 MSIP34_RS07595 084da349476296c2bb400c53c3733bbd 456 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 98 443 5.6E-115 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 MSIP34_RS04760 6348a78ece0ec0fa0717f60f8fcdc002 627 PANTHER PTHR30540:SF7 14 558 2.9E-239 T 23-04-2016 MSIP34_RS04760 6348a78ece0ec0fa0717f60f8fcdc002 627 PANTHER PTHR30540 14 558 2.9E-239 T 23-04-2016 MSIP34_RS04760 6348a78ece0ec0fa0717f60f8fcdc002 627 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 7 627 34.247 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup MSIP34_RS04760 6348a78ece0ec0fa0717f60f8fcdc002 627 Pfam PF02705 K+ potassium transporter 16 549 7.2E-213 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 MSIP34_RS04930 d9be4754ebba06c13b6eadaff2ebb17a 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 255 1.4E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04930 d9be4754ebba06c13b6eadaff2ebb17a 262 PANTHER PTHR30465:SF2 7 262 5.2E-85 T 23-04-2016 MSIP34_RS04930 d9be4754ebba06c13b6eadaff2ebb17a 262 SUPERFAMILY SSF161098 56 243 1.44E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04930 d9be4754ebba06c13b6eadaff2ebb17a 262 Gene3D G3DSA:1.10.3720.10 55 258 3.2E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS04930 d9be4754ebba06c13b6eadaff2ebb17a 262 PANTHER PTHR30465 7 262 5.2E-85 T 23-04-2016 MSIP34_RS00500 d0b566db8e78646e027a6387613627f8 150 SUPERFAMILY SSF141322 81 145 2.22E-6 T 23-04-2016 MSIP34_RS00500 d0b566db8e78646e027a6387613627f8 150 PANTHER PTHR33507:SF3 2 148 4.7E-24 T 23-04-2016 MSIP34_RS00500 d0b566db8e78646e027a6387613627f8 150 Gene3D G3DSA:2.40.50.140 87 145 5.3E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS00500 d0b566db8e78646e027a6387613627f8 150 PANTHER PTHR33507 2 148 4.7E-24 T 23-04-2016 MSIP34_RS00500 d0b566db8e78646e027a6387613627f8 150 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 146 2.4E-16 T 23-04-2016 IPR002810 NfeD-like, C-terminal domain MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 PANTHER PTHR19211:SF45 1 574 1.0E-223 T 23-04-2016 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Gene3D G3DSA:3.40.50.300 138 284 4.7E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Gene3D G3DSA:3.40.50.300 4 102 4.7E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Pfam PF12848 ABC transporter 226 301 9.1E-12 T 23-04-2016 IPR032781 ABC-transporter extension domain MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Pfam PF00005 ABC transporter 19 187 9.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Pfam PF00005 ABC transporter 338 471 6.0E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Gene3D G3DSA:3.40.50.300 323 543 6.2E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 Pfam PF16326 ABC transporter C-terminal domain 564 632 4.0E-22 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 PANTHER PTHR19211 1 574 1.0E-223 T 23-04-2016 MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 SUPERFAMILY SSF52540 4 236 1.26E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 SMART SM00382 28 232 6.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 SMART SM00382 346 516 2.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS05385 c549a156b2d3f9eaca9bda8c5639c1d6 635 SUPERFAMILY SSF52540 315 532 5.18E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Gene3D G3DSA:1.10.1060.10 795 896 6.4E-13 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF01565 FAD binding domain 165 310 9.3E-22 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 SUPERFAMILY SSF56176 126 394 4.5E-55 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF11880 Domain of unknown function (DUF3400) 1227 1270 1.7E-25 T 23-04-2016 IPR021817 Protein of unknown function DUF3400 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 863 874 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF12447 Protein of unknown function (DUF3683) 4 115 5.0E-52 T 23-04-2016 IPR022153 Protein of unknown function DUF3683 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF13183 4Fe-4S dicluster domain 799 877 1.4E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 PANTHER PTHR11748:SF35 355 449 1.1E-31 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 PANTHER PTHR11748:SF35 120 313 1.1E-31 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 PANTHER PTHR11748:SF35 568 810 1.1E-31 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 SUPERFAMILY SSF55103 404 546 6.54E-13 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 SUPERFAMILY SSF46548 796 897 2.44E-13 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF02754 Cysteine-rich domain 1010 1099 2.9E-8 T 23-04-2016 IPR004017 Cysteine-rich domain MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF02754 Cysteine-rich domain 1135 1223 3.2E-5 T 23-04-2016 IPR004017 Cysteine-rich domain MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 PANTHER PTHR11748 355 449 1.1E-31 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 PANTHER PTHR11748 120 313 1.1E-31 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 PANTHER PTHR11748 568 810 1.1E-31 T 23-04-2016 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 SUPERFAMILY SSF55103 640 764 2.94E-27 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Gene3D G3DSA:3.30.43.10 120 281 1.7E-34 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF02913 FAD linked oxidases, C-terminal domain 430 541 1.5E-4 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 MSIP34_RS11375 397728da4f53d5fd6881bf73596a3ca9 1270 Pfam PF02913 FAD linked oxidases, C-terminal domain 670 762 3.1E-18 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 MSIP34_RS09440 db5318e0ffaef3187feb782af83a3b94 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 19 120 3.3E-33 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 MSIP34_RS09440 db5318e0ffaef3187feb782af83a3b94 122 PANTHER PTHR34299 1 121 1.6E-36 T 23-04-2016 MSIP34_RS09440 db5318e0ffaef3187feb782af83a3b94 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 73 84 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 MSIP34_RS09440 db5318e0ffaef3187feb782af83a3b94 122 Gene3D G3DSA:1.10.3830.10 6 121 9.3E-43 T 23-04-2016 MSIP34_RS09440 db5318e0ffaef3187feb782af83a3b94 122 PANTHER PTHR34299:SF1 1 121 1.6E-36 T 23-04-2016 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 Hamap MF_00187 Protein FdhD [fdhD]. 4 278 34.813 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 36 277 2.8E-65 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 Pfam PF02634 FdhD/NarQ family 40 277 1.2E-72 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 Gene3D G3DSA:3.10.20.10 42 127 4.6E-27 T 23-04-2016 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 PANTHER PTHR30592 36 278 2.0E-103 T 23-04-2016 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 PANTHER PTHR30592:SF1 36 278 2.0E-103 T 23-04-2016 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 Gene3D G3DSA:3.40.140.10 142 278 5.5E-49 T 23-04-2016 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 PIRSF PIRSF015626 12 280 7.3E-82 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 MSIP34_RS06010 8c3223dbc2ebdde27e82fd6c515f9edc 286 SUPERFAMILY SSF53927 31 278 4.81E-78 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Gene3D G3DSA:2.20.200.10 100 143 3.1E-16 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Gene3D G3DSA:2.20.200.10 315 350 3.1E-16 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 PANTHER PTHR30203:SF3 4 466 1.8E-109 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Pfam PF02321 Outer membrane efflux protein 282 463 1.3E-31 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Pfam PF02321 Outer membrane efflux protein 64 256 3.9E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 SUPERFAMILY SSF56954 1 466 8.37E-117 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Gene3D G3DSA:1.20.1600.10 144 314 3.6E-103 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Gene3D G3DSA:1.20.1600.10 53 90 3.6E-103 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 Gene3D G3DSA:1.20.1600.10 352 466 3.6E-103 T 23-04-2016 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 465 3.9E-119 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS08590 2487d2ee561c9fae0ed4d998e34a0a22 471 PANTHER PTHR30203 4 466 1.8E-109 T 23-04-2016 MSIP34_RS10640 2a12a3ef8ad52c0edc0153aa9fc1cdee 357 SUPERFAMILY SSF144064 14 351 6.97E-119 T 23-04-2016 MSIP34_RS10640 2a12a3ef8ad52c0edc0153aa9fc1cdee 357 Gene3D G3DSA:3.40.1570.10 213 335 4.6E-7 T 23-04-2016 MSIP34_RS10640 2a12a3ef8ad52c0edc0153aa9fc1cdee 357 Gene3D G3DSA:3.40.1570.10 16 171 2.1E-4 T 23-04-2016 MSIP34_RS10640 2a12a3ef8ad52c0edc0153aa9fc1cdee 357 Pfam PF05171 Haemin-degrading HemS.ChuX domain 32 167 6.6E-42 T 23-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 MSIP34_RS10640 2a12a3ef8ad52c0edc0153aa9fc1cdee 357 Pfam PF05171 Haemin-degrading HemS.ChuX domain 219 350 7.8E-41 T 23-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 MSIP34_RS14680 20aac03f824c6e39fe1e457b780ac973 347 SMART SM00382 112 258 3.0E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS14680 20aac03f824c6e39fe1e457b780ac973 347 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 116 250 1.7E-11 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS14680 20aac03f824c6e39fe1e457b780ac973 347 SUPERFAMILY SSF52540 73 296 2.03E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14680 20aac03f824c6e39fe1e457b780ac973 347 Gene3D G3DSA:3.40.50.300 90 292 2.2E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05865 cd117426a6680f25aa586fa1784c6ecd 161 Gene3D G3DSA:3.10.180.10 2 119 2.8E-17 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS05865 cd117426a6680f25aa586fa1784c6ecd 161 PANTHER PTHR41294:SF1 2 151 2.3E-33 T 23-04-2016 MSIP34_RS05865 cd117426a6680f25aa586fa1784c6ecd 161 PANTHER PTHR41294 2 151 2.3E-33 T 23-04-2016 MSIP34_RS05865 cd117426a6680f25aa586fa1784c6ecd 161 SUPERFAMILY SSF54593 3 123 5.77E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 PANTHER PTHR30002:SF4 9 362 6.3E-169 T 23-04-2016 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 14 328 49.349 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 Pfam PF13484 4Fe-4S double cluster binding domain 205 269 3.9E-20 T 23-04-2016 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 Gene3D G3DSA:3.30.70.20 203 270 1.1E-6 T 23-04-2016 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 SUPERFAMILY SSF54862 182 337 5.02E-18 T 23-04-2016 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 PANTHER PTHR30002 9 362 6.3E-169 T 23-04-2016 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 21 362 1.5E-153 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 Pfam PF08331 Domain of unknown function (DUF1730) 69 153 1.4E-23 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 MSIP34_RS06540 150def304bd6eff17c32c5d994493de9 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 206 217 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 PIRSF PIRSF003085 21 423 4.5E-125 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 Gene3D G3DSA:3.40.50.150 135 411 4.3E-100 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 PANTHER PTHR10108 69 327 5.6E-122 T 23-04-2016 MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 PANTHER PTHR10108 345 421 5.6E-122 T 23-04-2016 MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 SUPERFAMILY SSF53335 26 367 6.12E-92 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 Pfam PF02353 Mycolic acid cyclopropane synthetase 141 403 2.2E-87 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 PANTHER PTHR10108:SF795 69 327 5.6E-122 T 23-04-2016 MSIP34_RS06620 e6052f2773b3d3b597a58d8b43b7db05 424 PANTHER PTHR10108:SF795 345 421 5.6E-122 T 23-04-2016 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 Gene3D G3DSA:3.20.20.70 2 205 3.7E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 Pfam PF01081 KDPG and KHG aldolase 9 198 4.1E-67 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 PANTHER PTHR30246:SF0 1 205 4.9E-87 T 23-04-2016 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 PANTHER PTHR30246 1 205 4.9E-87 T 23-04-2016 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 23-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 7 204 3.1E-71 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 MSIP34_RS09595 f48de40ee269277f01126f2d37ab85d6 208 SUPERFAMILY SSF51569 2 204 4.21E-63 T 23-04-2016 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 SUPERFAMILY SSF52540 4 554 9.03E-226 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 23-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 Pfam PF01268 Formate--tetrahydrofolate ligase 3 555 6.5E-252 T 23-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 45.586 T 23-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 Gene3D G3DSA:3.10.410.10 444 532 8.8E-27 T 23-04-2016 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 PANTHER PTHR10025 1 555 1.2E-289 T 23-04-2016 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 Gene3D G3DSA:3.30.1510.10 129 247 6.6E-55 T 23-04-2016 MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 Gene3D G3DSA:3.40.50.300 15 128 1.8E-141 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 Gene3D G3DSA:3.40.50.300 248 441 1.8E-141 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02425 176bc5a90b6df406daf733c5302b3574 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 23-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 PANTHER PTHR11241 1 189 4.5E-75 T 23-04-2016 MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 Gene3D G3DSA:2.70.40.10 3 189 3.4E-66 T 23-04-2016 IPR029054 dUTPase-like MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 PANTHER PTHR11241:SF1 1 189 4.5E-75 T 23-04-2016 MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 Pfam PF00692 dUTPase 73 184 2.5E-6 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 189 28.445 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 189 1.1E-47 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 MSIP34_RS05575 60fc9b1ce77ff281e7354781c3911fe6 189 SUPERFAMILY SSF51283 3 189 9.16E-51 T 23-04-2016 IPR029054 dUTPase-like MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 Gene3D G3DSA:1.10.760.10 14 168 1.1E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 Gene3D G3DSA:1.10.760.10 200 227 1.1E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 PANTHER PTHR10422:SF23 21 159 1.3E-74 T 23-04-2016 MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 SUPERFAMILY SSF46626 196 224 1.63E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 SUPERFAMILY SSF46626 15 154 1.63E-23 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 237 5.3E-94 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 230 1.8E-92 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO MSIP34_RS10765 948435a25742ecd0a5365b9953ce8101 244 PANTHER PTHR10422 21 159 1.3E-74 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 SUPERFAMILY SSF51556 64 126 1.3E-40 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 SUPERFAMILY SSF51556 206 497 1.3E-40 T 23-04-2016 IPR032466 Metal-dependent hydrolase MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 SUPERFAMILY SSF51338 496 542 1.33E-19 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 SUPERFAMILY SSF51338 5 65 1.33E-19 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 Pfam PF07969 Amidohydrolase family 54 537 4.9E-123 T 23-04-2016 IPR013108 Amidohydrolase 3 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 Gene3D G3DSA:2.30.40.10 5 66 5.1E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 Gene3D G3DSA:2.30.40.10 496 538 5.1E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 PANTHER PTHR22642:SF2 4 555 8.9E-165 T 23-04-2016 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 Gene3D G3DSA:3.20.20.140 206 486 1.0E-16 T 23-04-2016 MSIP34_RS13455 5a2e4afd3a70b591c5d55c2c24332c9c 626 PANTHER PTHR22642 4 555 8.9E-165 T 23-04-2016 MSIP34_RS02610 cec7c84ea8cc1bfe30403780d6a58c95 104 PANTHER PTHR21349 1 102 1.6E-44 T 23-04-2016 MSIP34_RS02610 cec7c84ea8cc1bfe30403780d6a58c95 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.9E-39 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02610 cec7c84ea8cc1bfe30403780d6a58c95 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 28.391 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02610 cec7c84ea8cc1bfe30403780d6a58c95 104 SUPERFAMILY SSF141091 1 101 2.75E-39 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 MSIP34_RS02610 cec7c84ea8cc1bfe30403780d6a58c95 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02610 cec7c84ea8cc1bfe30403780d6a58c95 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.0E-42 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.696 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 SUPERFAMILY SSF56762 16 417 2.35E-139 T 23-04-2016 IPR029014 NiFe hydrogenase-like MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 6.5E-187 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 PANTHER PTHR11993 3 164 4.1E-241 T 23-04-2016 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 PANTHER PTHR11993 190 412 4.1E-241 T 23-04-2016 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 PANTHER PTHR11993:SF10 3 164 4.1E-241 T 23-04-2016 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 PANTHER PTHR11993:SF10 190 412 4.1E-241 T 23-04-2016 MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 Gene3D G3DSA:1.10.645.10 257 403 7.6E-18 T 23-04-2016 IPR029014 NiFe hydrogenase-like MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 Gene3D G3DSA:1.10.645.10 7 256 4.0E-46 T 23-04-2016 IPR029014 NiFe hydrogenase-like MSIP34_RS03445 7b01087e0e092e87b41528f5fd7ebb9a 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 8.6E-125 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 MSIP34_RS04690 06146abf5a6def26e226524ce485142d 212 PANTHER PTHR22939:SF104 35 200 1.1E-49 T 23-04-2016 MSIP34_RS04690 06146abf5a6def26e226524ce485142d 212 PANTHER PTHR22939 35 200 1.1E-49 T 23-04-2016 MSIP34_RS04690 06146abf5a6def26e226524ce485142d 212 Pfam PF02163 Peptidase family M50 128 186 6.1E-8 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 PANTHER PTHR13847:SF206 266 672 1.3E-53 T 23-04-2016 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 PANTHER PTHR13847:SF206 218 240 1.3E-53 T 23-04-2016 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Gene3D G3DSA:3.40.50.150 3 241 2.9E-87 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 287 673 1.1E-128 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 PANTHER PTHR13847 266 672 1.3E-53 T 23-04-2016 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 PANTHER PTHR13847 218 240 1.3E-53 T 23-04-2016 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Pfam PF01266 FAD dependent oxidoreductase 288 647 1.8E-50 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 SUPERFAMILY SSF51905 608 672 2.07E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 SUPERFAMILY SSF51905 287 497 2.07E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 115 234 3.4E-40 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 1 672 26.408 T 23-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 SUPERFAMILY SSF54373 498 588 9.81E-9 T 23-04-2016 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Gene3D G3DSA:3.50.50.60 589 672 3.9E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Gene3D G3DSA:3.50.50.60 416 496 3.9E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS06610 54fe0462055fd71b02e33d67c954b146 688 Gene3D G3DSA:3.50.50.60 287 361 3.9E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 6.5E-163 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 Gene3D G3DSA:3.20.20.10 36 266 3.5E-81 T 23-04-2016 IPR029066 PLP-binding barrel MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 3.8E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 3.8E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 3.8E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 3.8E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 3.8E-24 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PANTHER PTHR11482:SF5 7 413 9.4E-170 T 23-04-2016 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 388 3.3E-19 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PANTHER PTHR11482 7 413 9.4E-170 T 23-04-2016 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 42.129 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 Gene3D G3DSA:2.40.37.10 267 413 1.3E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 226 241 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 2.4E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 2.4E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.4E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.4E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 SUPERFAMILY SSF50621 253 411 9.84E-56 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 SUPERFAMILY SSF51419 27 282 4.36E-80 T 23-04-2016 IPR029066 PLP-binding barrel MSIP34_RS13045 425f9b8cec4c2756bd0afece18f607f7 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 37 280 1.8E-68 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 Gene3D G3DSA:2.30.33.40 2 95 1.9E-36 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 SUPERFAMILY SSF50129 1 95 1.53E-33 T 23-04-2016 IPR011032 GroES-like MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 SMART SM00883 2 94 3.8E-55 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.172 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 PANTHER PTHR10772 1 104 1.9E-44 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 1.6E-33 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 PRINTS PR00297 10kDa chaperonin signature 60 72 1.2E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 PRINTS PR00297 10kDa chaperonin signature 3 18 1.2E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 PRINTS PR00297 10kDa chaperonin signature 25 46 1.2E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS11545 9a715baeac46bf26151253acc70ad26d 105 PRINTS PR00297 10kDa chaperonin signature 81 94 1.2E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 19 478 4.6E-223 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 PANTHER PTHR10422 1 479 5.2E-272 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 SUPERFAMILY SSF81442 20 476 3.27E-126 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 216 271 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 PANTHER PTHR10422:SF21 1 479 5.2E-272 T 23-04-2016 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 24 454 9.8E-118 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS10770 626b51bbe77b1a45ba6822eca273c26a 487 Gene3D G3DSA:1.20.210.10 16 478 8.7E-74 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 PANTHER PTHR24221 1 613 1.7E-187 T 23-04-2016 MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 Gene3D G3DSA:1.20.1560.10 32 350 5.3E-69 T 23-04-2016 MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 Pfam PF00005 ABC transporter 386 534 3.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 Gene3D G3DSA:3.40.50.300 366 598 6.0E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 SMART SM00382 394 583 2.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 Pfam PF00664 ABC transporter transmembrane region 52 321 2.9E-39 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 SUPERFAMILY SSF52540 361 603 2.51E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00620 d5561499c3dbec9c3d937b1b9029a2ca 619 SUPERFAMILY SSF90123 32 354 2.22E-68 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS00950 1257b0bd62dcb722430bab6f32610e42 113 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 5.6E-31 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV MSIP34_RS00950 1257b0bd62dcb722430bab6f32610e42 113 PANTHER PTHR37309 1 112 6.2E-31 T 23-04-2016 MSIP34_RS00950 1257b0bd62dcb722430bab6f32610e42 113 PANTHER PTHR37309:SF1 1 112 6.2E-31 T 23-04-2016 MSIP34_RS08125 b35f4aa48e55b81449894a708a76c8d3 337 PANTHER PTHR39573:SF1 6 335 8.9E-146 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 MSIP34_RS08125 b35f4aa48e55b81449894a708a76c8d3 337 Hamap MF_01497 Stress response kinase A [srkA]. 8 325 47.364 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 MSIP34_RS08125 b35f4aa48e55b81449894a708a76c8d3 337 PANTHER PTHR39573 6 335 8.9E-146 T 23-04-2016 MSIP34_RS08125 b35f4aa48e55b81449894a708a76c8d3 337 Pfam PF01636 Phosphotransferase enzyme family 40 268 8.4E-38 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase MSIP34_RS08125 b35f4aa48e55b81449894a708a76c8d3 337 SUPERFAMILY SSF56112 11 329 1.46E-85 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS08125 b35f4aa48e55b81449894a708a76c8d3 337 Gene3D G3DSA:3.90.1200.10 111 330 6.7E-53 T 23-04-2016 MSIP34_RS06400 bdab6b18d2360035508fbd9559175de4 130 Gene3D G3DSA:2.40.10.220 9 125 4.6E-12 T 23-04-2016 MSIP34_RS06400 bdab6b18d2360035508fbd9559175de4 130 Pfam PF07238 PilZ domain 8 116 6.7E-7 T 23-04-2016 IPR009875 PilZ domain GO:0035438 MSIP34_RS12010 14e522bc6df9a0abcd129ef90bdd0313 126 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 2 124 26.125 T 23-04-2016 IPR023006 Uncharacterised protein family UPF0225 MSIP34_RS12010 14e522bc6df9a0abcd129ef90bdd0313 126 Pfam PF01473 Putative cell wall binding repeat 110 126 4.8E-5 T 23-04-2016 IPR018337 Cell wall/choline-binding repeat MSIP34_RS12010 14e522bc6df9a0abcd129ef90bdd0313 126 SUPERFAMILY SSF54427 29 123 5.7E-28 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS12010 14e522bc6df9a0abcd129ef90bdd0313 126 Gene3D G3DSA:3.10.450.50 5 123 2.3E-39 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS12010 14e522bc6df9a0abcd129ef90bdd0313 126 Pfam PF02810 SEC-C motif 4 20 4.7E-6 T 23-04-2016 IPR004027 SEC-C motif MSIP34_RS05555 701bf6836a0f74000153ed03ac4cb341 383 Gene3D G3DSA:1.10.620.20 50 357 4.2E-111 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 MSIP34_RS05555 701bf6836a0f74000153ed03ac4cb341 383 PANTHER PTHR23409 47 378 1.2E-146 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 MSIP34_RS05555 701bf6836a0f74000153ed03ac4cb341 383 PANTHER PTHR23409:SF18 47 378 1.2E-146 T 23-04-2016 MSIP34_RS05555 701bf6836a0f74000153ed03ac4cb341 383 SUPERFAMILY SSF47240 47 354 5.95E-97 T 23-04-2016 IPR009078 Ferritin-like superfamily MSIP34_RS05555 701bf6836a0f74000153ed03ac4cb341 383 PIRSF PIRSF000355 36 383 2.1E-135 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 MSIP34_RS05555 701bf6836a0f74000153ed03ac4cb341 383 Pfam PF00268 Ribonucleotide reductase, small chain 63 350 1.4E-83 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 SUPERFAMILY SSF52833 20 192 1.35E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 Pfam PF01323 DSBA-like thioredoxin domain 89 191 1.2E-11 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 PIRSF PIRSF001488 1 207 1.2E-45 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 ProSitePatterns PS00194 Thioredoxin family active site. 44 62 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 PANTHER PTHR35891:SF2 4 209 1.8E-47 T 23-04-2016 MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 PANTHER PTHR35891 4 209 1.8E-47 T 23-04-2016 MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 Gene3D G3DSA:3.40.30.10 1 117 2.4E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS14080 d05a35f97c673e0fa131f9fdaee15e35 210 Gene3D G3DSA:3.40.30.10 122 200 9.0E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 Pfam PF08281 Sigma-70, region 4 126 174 2.0E-18 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 SUPERFAMILY SSF88659 94 185 1.03E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 PANTHER PTHR30173 4 184 2.3E-26 T 23-04-2016 MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 Gene3D G3DSA:1.10.1740.10 5 77 3.1E-8 T 23-04-2016 MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 Gene3D G3DSA:1.10.10.10 118 184 2.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 Pfam PF04542 Sigma-70 region 2 11 75 1.5E-5 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 177 7.1E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS01220 7647e108e3ea06c923b4eb4e053b7602 198 SUPERFAMILY SSF88946 9 84 8.63E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS05095 69a9e64f6f4ce562074cfa36e6be4de2 173 PANTHER PTHR10003 18 173 8.8E-43 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 MSIP34_RS05095 69a9e64f6f4ce562074cfa36e6be4de2 173 PANTHER PTHR10003:SF40 18 173 8.8E-43 T 23-04-2016 MSIP34_RS05095 69a9e64f6f4ce562074cfa36e6be4de2 173 Gene3D G3DSA:2.60.40.200 26 173 7.2E-46 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS05095 69a9e64f6f4ce562074cfa36e6be4de2 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS05095 69a9e64f6f4ce562074cfa36e6be4de2 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 36 172 4.1E-33 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS05095 69a9e64f6f4ce562074cfa36e6be4de2 173 SUPERFAMILY SSF49329 24 173 1.57E-46 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 Gene3D G3DSA:3.30.70.270 238 341 9.8E-10 T 23-04-2016 MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 Gene3D G3DSA:3.20.20.450 410 642 9.8E-40 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 SUPERFAMILY SSF141868 414 642 2.22E-41 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 PANTHER PTHR33121 410 636 4.9E-29 T 23-04-2016 MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 SMART SM00267 224 412 4.7E-6 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 PANTHER PTHR33121:SF10 410 636 4.9E-29 T 23-04-2016 MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 SUPERFAMILY SSF55073 241 339 1.73E-8 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 Pfam PF16448 LapD/MoxY periplasmic domain 24 145 3.5E-39 T 23-04-2016 IPR032244 LapD/MoxY, periplasmic domain MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 SMART SM00052 407 640 9.7E-10 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 Pfam PF00563 EAL domain 413 642 1.3E-43 T 23-04-2016 IPR001633 EAL domain MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 Pfam PF00672 HAMP domain 153 218 1.7E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS05170 b5d6fe4b878b7dec23373b285526e4ef 644 Pfam PF00990 Diguanylate cyclase, GGDEF domain 235 332 7.4E-10 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS00555 a3bb4e9675ef6f91b1636e6656ec8456 283 PANTHER PTHR33446:SF2 88 281 1.3E-20 T 23-04-2016 MSIP34_RS00555 a3bb4e9675ef6f91b1636e6656ec8456 283 Gene3D G3DSA:3.30.1150.10 200 281 1.3E-15 T 23-04-2016 MSIP34_RS00555 a3bb4e9675ef6f91b1636e6656ec8456 283 SUPERFAMILY SSF74653 199 279 3.92E-23 T 23-04-2016 MSIP34_RS00555 a3bb4e9675ef6f91b1636e6656ec8456 283 PANTHER PTHR33446 88 281 1.3E-20 T 23-04-2016 MSIP34_RS00555 a3bb4e9675ef6f91b1636e6656ec8456 283 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 203 281 1.5E-22 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS00555 a3bb4e9675ef6f91b1636e6656ec8456 283 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 205 281 1.5E-21 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS13645 0e571a832c41fc906008ee68646438ca 286 Gene3D G3DSA:3.20.20.70 30 205 1.6E-5 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS13645 0e571a832c41fc906008ee68646438ca 286 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 41 236 3.6E-41 T 23-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN MSIP34_RS13645 0e571a832c41fc906008ee68646438ca 286 SUPERFAMILY SSF159501 25 277 3.19E-47 T 23-04-2016 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 Gene3D G3DSA:3.40.640.10 69 347 7.0E-86 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 PANTHER PTHR11986 1 442 1.5E-184 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 PANTHER PTHR11986:SF8 1 442 1.5E-184 T 23-04-2016 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 Pfam PF00202 Aminotransferase class-III 29 439 8.8E-121 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 18 439 5.7E-162 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 SUPERFAMILY SSF53383 15 441 3.1E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 PIRSF PIRSF000521 22 442 8.9E-36 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 Gene3D G3DSA:3.90.1150.10 7 68 6.9E-51 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS02200 219ca1d409d57e1b91114bae898a9447 443 Gene3D G3DSA:3.90.1150.10 349 441 6.9E-51 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Pfam PF12833 Helix-turn-helix domain 114 191 3.9E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 PANTHER PTHR10815:SF9 166 357 1.6E-101 T 23-04-2016 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 PANTHER PTHR10815 166 357 1.6E-101 T 23-04-2016 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 328 334 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Gene3D G3DSA:3.30.160.70 189 276 4.7E-33 T 23-04-2016 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 SUPERFAMILY SSF46689 93 141 2.48E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 SUPERFAMILY SSF57884 12 90 3.27E-32 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Gene3D G3DSA:1.10.10.60 92 145 2.1E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 SUPERFAMILY SSF46767 277 357 4.32E-30 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 SUPERFAMILY SSF53155 196 275 6.28E-21 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 279 357 1.0E-31 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Gene3D G3DSA:1.10.10.60 150 188 7.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 SMART SM00342 108 190 5.0E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 278 357 1.0E-34 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 PIRSF PIRSF000409 3 360 5.8E-140 T 23-04-2016 IPR016221 Bifunctional regulatory protein Ada MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Gene3D G3DSA:1.10.10.10 277 358 3.2E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Pfam PF02805 Metal binding domain of Ada 18 81 1.1E-32 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 MSIP34_RS05855 b271242a5fc255693b33480c528233b5 360 Gene3D G3DSA:3.40.10.10 15 91 4.3E-34 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 MSIP34_RS05210 732adb3504e56f25745f5df7fa8a92e3 87 PANTHER PTHR34477:SF1 3 87 3.6E-30 T 23-04-2016 MSIP34_RS05210 732adb3504e56f25745f5df7fa8a92e3 87 PANTHER PTHR34477 3 87 3.6E-30 T 23-04-2016 MSIP34_RS05210 732adb3504e56f25745f5df7fa8a92e3 87 SUPERFAMILY SSF82771 9 78 1.57E-10 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS05210 732adb3504e56f25745f5df7fa8a92e3 87 Pfam PF01541 GIY-YIG catalytic domain 10 79 9.2E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily MSIP34_RS10960 166e5a1b8e6b555a1daa0b6c100c543f 455 PANTHER PTHR30624:SF1 12 455 9.0E-154 T 23-04-2016 MSIP34_RS10960 166e5a1b8e6b555a1daa0b6c100c543f 455 SUPERFAMILY SSF111283 17 454 1.31E-126 T 23-04-2016 MSIP34_RS10960 166e5a1b8e6b555a1daa0b6c100c543f 455 Pfam PF01523 Putative modulator of DNA gyrase 38 329 2.5E-53 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS10960 166e5a1b8e6b555a1daa0b6c100c543f 455 PANTHER PTHR30624 12 455 9.0E-154 T 23-04-2016 MSIP34_RS03145 2ef8f9249808600ece53130b0784606b 191 Pfam PF02325 YGGT family 12 78 2.8E-15 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 MSIP34_RS03145 2ef8f9249808600ece53130b0784606b 191 Pfam PF02325 YGGT family 114 178 1.3E-12 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 MSIP34_RS03145 2ef8f9249808600ece53130b0784606b 191 PANTHER PTHR33219 1 183 2.0E-29 T 23-04-2016 MSIP34_RS03145 2ef8f9249808600ece53130b0784606b 191 PANTHER PTHR33219:SF5 1 183 2.0E-29 T 23-04-2016 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 Pfam PF00285 Citrate synthase, C-terminal domain 52 416 1.6E-129 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 ProSitePatterns PS00480 Citrate synthase signature. 307 319 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 Gene3D G3DSA:1.10.580.10 56 284 7.7E-95 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 20 427 1.5E-231 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PIRSF PIRSF001369 42 433 1.2E-165 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PANTHER PTHR11739 43 433 2.5E-198 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 Gene3D G3DSA:1.10.230.10 285 378 2.7E-39 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PRINTS PR00143 Citrate synthase signature 245 273 2.37E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PRINTS PR00143 Citrate synthase signature 169 182 2.37E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PRINTS PR00143 Citrate synthase signature 223 238 2.37E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PRINTS PR00143 Citrate synthase signature 364 380 2.37E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PRINTS PR00143 Citrate synthase signature 384 398 2.37E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 PRINTS PR00143 Citrate synthase signature 300 320 2.37E-53 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS00320 fc10cbe5639f53a08af204fb132efce6 433 SUPERFAMILY SSF48256 12 433 1.03E-164 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 Gene3D G3DSA:3.10.50.40 257 390 1.9E-45 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 PANTHER PTHR10657:SF11 1 164 2.3E-86 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 PANTHER PTHR10657:SF11 239 520 2.3E-86 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 Pfam PF13624 SurA N-terminal domain 1 161 1.3E-44 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 Pfam PF13616 PPIC-type PPIASE domain 252 368 1.4E-34 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 306 327 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 PANTHER PTHR10657 1 164 2.3E-86 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 PANTHER PTHR10657 239 520 2.3E-86 T 23-04-2016 MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 SUPERFAMILY SSF109998 199 238 1.14E-29 T 23-04-2016 IPR027304 Trigger factor/SurA domain MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 SUPERFAMILY SSF109998 43 165 1.14E-29 T 23-04-2016 IPR027304 Trigger factor/SurA domain MSIP34_RS07405 cf30849b66c6d2bab7b38a749b49b74b 632 SUPERFAMILY SSF54534 257 367 4.25E-35 T 23-04-2016 MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 SUPERFAMILY SSF53448 1 185 6.07E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 Pfam PF12804 MobA-like NTP transferase domain 5 155 4.3E-36 T 23-04-2016 IPR025877 MobA-like NTP transferase MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 PANTHER PTHR19136:SF81 2 190 1.6E-47 T 23-04-2016 MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 Gene3D G3DSA:3.90.550.10 1 190 9.6E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 3 185 5.3E-70 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 PANTHER PTHR19136 2 190 1.6E-47 T 23-04-2016 MSIP34_RS11725 fb19333e3a5df4c8a8569e37e55e0c70 192 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 188 29.291 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 SMART SM01382 124 252 3.7E-88 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.7E-31 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 SMART SM01383 42 118 1.2E-40 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 PIRSF PIRSF002158 7 275 9.3E-98 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 SUPERFAMILY SSF50249 3 125 1.54E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.603 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.9E-54 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 3.6E-128 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 Gene3D G3DSA:4.10.950.10 196 272 7.3E-33 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 Gene3D G3DSA:2.40.50.140 1 113 3.2E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 PANTHER PTHR13691:SF5 1 277 2.0E-134 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 SUPERFAMILY SSF50104 126 272 2.53E-59 T 23-04-2016 IPR008991 Translation protein SH3-like domain MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 Gene3D G3DSA:2.30.30.30 119 195 4.5E-33 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 MSIP34_RS01595 c99dfea20c334b4a14110faf71b9196e 277 PANTHER PTHR13691 1 277 2.0E-134 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS02310 54d00542cacb44d27e44f52c6948f252 90 PANTHER PTHR37479 3 87 9.2E-23 T 23-04-2016 MSIP34_RS02310 54d00542cacb44d27e44f52c6948f252 90 PANTHER PTHR37479:SF1 3 87 9.2E-23 T 23-04-2016 MSIP34_RS02310 54d00542cacb44d27e44f52c6948f252 90 Pfam PF04999 Cell division protein FtsL 3 85 2.8E-25 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 MSIP34_RS02310 54d00542cacb44d27e44f52c6948f252 90 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 16.589 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 MSIP34_RS02310 54d00542cacb44d27e44f52c6948f252 90 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 84 8.0E-26 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 MSIP34_RS06790 73de320f8fa522048093ece5512550f3 176 Gene3D G3DSA:1.20.1260.10 33 165 2.2E-9 T 23-04-2016 IPR012347 Ferritin-related MSIP34_RS06790 73de320f8fa522048093ece5512550f3 176 Pfam PF13628 Domain of unknown function (DUF4142) 34 170 7.6E-43 T 23-04-2016 IPR025419 Domain of unknown function DUF4142 MSIP34_RS06790 73de320f8fa522048093ece5512550f3 176 PANTHER PTHR38593 33 176 1.2E-18 T 23-04-2016 MSIP34_RS02945 d959960817c6e3f12d4672315cb172d7 848 PANTHER PTHR30189 67 156 1.4E-56 T 23-04-2016 MSIP34_RS02945 d959960817c6e3f12d4672315cb172d7 848 PANTHER PTHR30189 205 791 1.4E-56 T 23-04-2016 MSIP34_RS02945 d959960817c6e3f12d4672315cb172d7 848 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 28 814 20.001 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 MSIP34_RS02945 d959960817c6e3f12d4672315cb172d7 848 Pfam PF04453 Organic solvent tolerance protein 359 754 1.7E-93 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 MSIP34_RS02945 d959960817c6e3f12d4672315cb172d7 848 Pfam PF03968 OstA-like protein 66 139 3.7E-4 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal MSIP34_RS02945 d959960817c6e3f12d4672315cb172d7 848 Gene3D G3DSA:2.60.450.10 65 148 7.1E-11 T 23-04-2016 MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 SUPERFAMILY SSF117143 79 363 4.45E-81 T 23-04-2016 MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 PANTHER PTHR30435:SF1 280 402 3.1E-95 T 23-04-2016 MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 PANTHER PTHR30435:SF1 1 123 3.1E-95 T 23-04-2016 MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 Pfam PF00460 Flagella basal body rod protein 3 33 1.7E-11 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 323 401 2.0E-19 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 Pfam PF07559 Flagellar basal body protein FlaE 176 283 2.6E-25 T 23-04-2016 IPR011491 Flagellar hook protein FlgE MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 384 1.5E-102 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 PANTHER PTHR30435 280 402 3.1E-95 T 23-04-2016 MSIP34_RS03965 19d6fbee356e83e7d14c56f925a12251 402 PANTHER PTHR30435 1 123 3.1E-95 T 23-04-2016 MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 5.1E-24 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 PANTHER PTHR10374 1 125 4.0E-61 T 23-04-2016 MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 SUPERFAMILY SSF54593 1 126 1.88E-37 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 Gene3D G3DSA:3.10.180.10 1 127 3.0E-47 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 1.4E-66 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS09695 df97100e79b43fc74559fe756649e9b1 129 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 61 80 1.9E-20 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 301 323 1.9E-20 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 436 449 1.9E-20 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 359 373 1.9E-20 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 374 388 1.9E-20 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PANTHER PTHR30023 14 481 9.9E-79 T 23-04-2016 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 25 476 1.7E-90 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 SUPERFAMILY SSF56601 22 479 3.48E-93 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 PANTHER PTHR30023:SF0 14 481 9.9E-79 T 23-04-2016 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 Gene3D G3DSA:3.40.710.10 39 79 1.9E-4 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 52 458 2.4E-67 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 MSIP34_RS02205 08ed754a73eaf9b76a97df238109de1d 481 Gene3D G3DSA:3.40.710.10 243 479 2.2E-68 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like MSIP34_RS03185 f1531c29a8a31cb46ebbf2703c3ef586 165 Gene3D G3DSA:3.40.50.2020 15 140 2.1E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS03185 f1531c29a8a31cb46ebbf2703c3ef586 165 PANTHER PTHR11608 23 165 3.6E-48 T 23-04-2016 MSIP34_RS03185 f1531c29a8a31cb46ebbf2703c3ef586 165 Pfam PF00156 Phosphoribosyl transferase domain 24 129 9.0E-15 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 MSIP34_RS03185 f1531c29a8a31cb46ebbf2703c3ef586 165 SUPERFAMILY SSF53271 20 141 9.96E-33 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 8.3E-11 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 8.3E-11 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 8.3E-11 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 PANTHER PTHR30413 14 258 3.1E-59 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 Pfam PF01061 ABC-2 type transporter 13 222 2.6E-36 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 PANTHER PTHR30413:SF2 14 258 3.1E-59 T 23-04-2016 MSIP34_RS01360 ad7d1204b0feabd589b832c2e7bba8ca 259 PIRSF PIRSF006648 1 256 5.0E-26 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 SUPERFAMILY SSF46626 29 108 4.73E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 PRINTS PR00606 Class ID cytochrome C signature 31 44 4.1E-24 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 PRINTS PR00606 Class ID cytochrome C signature 84 94 4.1E-24 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 PRINTS PR00606 Class ID cytochrome C signature 69 82 4.1E-24 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 PRINTS PR00606 Class ID cytochrome C signature 46 59 4.1E-24 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 PRINTS PR00606 Class ID cytochrome C signature 97 107 4.1E-24 T 23-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 Gene3D G3DSA:1.10.760.10 28 108 1.8E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01920 19223aed6e132cf542f197ba92d4edd3 108 Pfam PF00034 Cytochrome c 27 108 2.6E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 185 1.5E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 PANTHER PTHR32552:SF10 34 756 4.2E-92 T 23-04-2016 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 89 756 2.2E-68 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 Gene3D G3DSA:2.170.130.10 50 193 4.2E-30 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 PANTHER PTHR32552 34 756 4.2E-92 T 23-04-2016 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 Pfam PF00593 TonB dependent receptor 501 747 1.4E-22 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 Gene3D G3DSA:2.40.170.20 200 756 1.0E-109 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS05355 38289224f8b764fb8becddf5a4bee1d3 756 SUPERFAMILY SSF56935 50 756 9.42E-116 T 23-04-2016 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 SUPERFAMILY SSF51569 1 316 1.78E-114 T 23-04-2016 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 Hamap MF_00492 Transaldolase [tal]. 2 317 50.042 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 TIGRFAM TIGR00874 talAB: transaldolase 3 317 1.5E-148 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 Gene3D G3DSA:3.20.20.70 3 316 2.4E-129 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 Pfam PF00923 Transaldolase 14 312 6.4E-97 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 PANTHER PTHR10683 1 317 8.9E-175 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS07635 956d287cd1993632267e7da9674f4cfd 317 PANTHER PTHR10683:SF18 1 317 8.9E-175 T 23-04-2016 MSIP34_RS09950 26bd53813658a1028c42bd5d07c576de 430 SMART SM00052 170 416 3.0E-106 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09950 26bd53813658a1028c42bd5d07c576de 430 Pfam PF00563 EAL domain 176 411 1.7E-71 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09950 26bd53813658a1028c42bd5d07c576de 430 SUPERFAMILY SSF141868 175 423 9.55E-90 T 23-04-2016 IPR001633 EAL domain MSIP34_RS09950 26bd53813658a1028c42bd5d07c576de 430 PANTHER PTHR33121:SF13 165 421 5.5E-85 T 23-04-2016 MSIP34_RS09950 26bd53813658a1028c42bd5d07c576de 430 PANTHER PTHR33121 165 421 5.5E-85 T 23-04-2016 MSIP34_RS09950 26bd53813658a1028c42bd5d07c576de 430 Gene3D G3DSA:3.20.20.450 174 423 3.5E-96 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13585 2fb8242dd3ab4f92bd0419bbc5d2418a 228 Pfam PF10677 Protein of unknown function (DUF2490) 32 216 1.4E-52 T 23-04-2016 IPR019619 Protein of unknown function DUF2490 MSIP34_RS02515 49ef74ac570c205ed3710aed2a1bef70 250 Gene3D G3DSA:3.40.50.300 5 235 4.5E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02515 49ef74ac570c205ed3710aed2a1bef70 250 SUPERFAMILY SSF52540 7 233 1.36E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02515 49ef74ac570c205ed3710aed2a1bef70 250 Pfam PF00005 ABC transporter 27 168 4.9E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS02515 49ef74ac570c205ed3710aed2a1bef70 250 PANTHER PTHR24220 12 249 5.4E-72 T 23-04-2016 MSIP34_RS02515 49ef74ac570c205ed3710aed2a1bef70 250 SMART SM00382 35 216 1.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS02515 49ef74ac570c205ed3710aed2a1bef70 250 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS02230 74c1cc7749d534c4d68bbf7544bc7775 104 Pfam PF10084 Uncharacterized protein conserved in bacteria (DUF2322) 4 101 2.2E-39 T 23-04-2016 IPR016755 Uncharacterised conserved protein UCP019302 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 PANTHER PTHR32089 49 499 9.1E-100 T 23-04-2016 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 SUPERFAMILY SSF58104 234 499 8.72E-63 T 23-04-2016 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 497 6.6E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 356 383 1.2E-32 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.2E-32 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 1.2E-32 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.2E-32 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 1.2E-32 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 178 9.7E-23 T 23-04-2016 IPR024478 4HB MCP domain MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 Gene3D G3DSA:1.10.287.950 274 470 5.2E-45 T 23-04-2016 MSIP34_RS13595 11d040664e1c84718eed68129ea0678f 499 SMART SM00283 265 498 1.3E-73 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS09995 d2b0c327290c0f12f3952ceb5733efe3 144 Pfam PF00892 EamA-like transporter family 7 141 1.8E-22 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS09995 d2b0c327290c0f12f3952ceb5733efe3 144 PANTHER PTHR22911 1 141 7.2E-23 T 23-04-2016 MSIP34_RS09995 d2b0c327290c0f12f3952ceb5733efe3 144 SUPERFAMILY SSF103481 46 143 2.35E-17 T 23-04-2016 MSIP34_RS10615 f12a0ee42d08d2d3e234ccce97ae50ba 74 Pfam PF05433 Glycine zipper 2TM domain 30 65 1.0E-5 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 Gene3D G3DSA:1.25.40.10 41 93 6.7E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 SUPERFAMILY SSF54427 294 400 3.68E-8 T 23-04-2016 IPR032710 NTF2-like domain MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 SUPERFAMILY SSF141523 143 272 8.37E-15 T 23-04-2016 MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 Gene3D G3DSA:2.40.440.10 140 272 1.2E-14 T 23-04-2016 MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 PANTHER PTHR36699 76 394 3.8E-18 T 23-04-2016 MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 SUPERFAMILY SSF48452 40 92 5.14E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11320 a27b31888336b6033cebe953e5dbcb40 404 Pfam PF03734 L,D-transpeptidase catalytic domain 145 278 2.7E-17 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 MSIP34_RS13245 7441948c350aad52035340a2604f16ae 251 PANTHER PTHR30151 1 249 2.3E-59 T 23-04-2016 MSIP34_RS13245 7441948c350aad52035340a2604f16ae 251 SUPERFAMILY SSF161098 50 237 8.76E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS13245 7441948c350aad52035340a2604f16ae 251 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 243 6.6E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS13245 7441948c350aad52035340a2604f16ae 251 Gene3D G3DSA:1.10.3720.10 68 246 1.1E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS01280 47c0914a916f80d7e0123cd22e55cb7c 310 Gene3D G3DSA:3.40.50.620 25 204 9.5E-24 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS01280 47c0914a916f80d7e0123cd22e55cb7c 310 PANTHER PTHR11807 11 267 6.5E-102 T 23-04-2016 MSIP34_RS01280 47c0914a916f80d7e0123cd22e55cb7c 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 7 268 54.634 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 MSIP34_RS01280 47c0914a916f80d7e0123cd22e55cb7c 310 SUPERFAMILY SSF52402 25 254 1.28E-54 T 23-04-2016 MSIP34_RS01280 47c0914a916f80d7e0123cd22e55cb7c 310 PANTHER PTHR11807:SF16 11 267 6.5E-102 T 23-04-2016 MSIP34_RS01280 47c0914a916f80d7e0123cd22e55cb7c 310 Pfam PF01171 PP-loop family 39 202 2.3E-14 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal MSIP34_RS05040 bd0955ea25a4c60f710ddfcd2bfdbc1f 197 Gene3D G3DSA:3.40.50.360 1 196 2.4E-66 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS05040 bd0955ea25a4c60f710ddfcd2bfdbc1f 197 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 195 3.3E-43 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 MSIP34_RS05040 bd0955ea25a4c60f710ddfcd2bfdbc1f 197 SUPERFAMILY SSF52218 1 195 3.67E-57 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS05040 bd0955ea25a4c60f710ddfcd2bfdbc1f 197 Pfam PF03358 NADPH-dependent FMN reductase 65 140 1.8E-5 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 MSIP34_RS05040 bd0955ea25a4c60f710ddfcd2bfdbc1f 197 PANTHER PTHR30546 1 197 3.2E-72 T 23-04-2016 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 Gene3D G3DSA:3.55.30.10 7 178 4.0E-61 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 Gene3D G3DSA:1.10.287.480 182 228 1.2E-18 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 PIRSF PIRSF005261 2 287 4.8E-76 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 PANTHER PTHR30111 4 291 9.2E-65 T 23-04-2016 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 Gene3D G3DSA:3.90.1280.10 229 285 9.3E-24 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 SUPERFAMILY SSF118352 228 285 3.79E-19 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 Hamap MF_00117 33 kDa chaperonin [hslO]. 9 287 28.768 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 PANTHER PTHR30111:SF1 4 291 9.2E-65 T 23-04-2016 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 SUPERFAMILY SSF64397 10 235 1.11E-68 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 MSIP34_RS05830 3237457fd9c4ab622950592f4baa50ea 297 Pfam PF01430 Hsp33 protein 10 276 2.1E-85 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 SUPERFAMILY SSF117892 137 246 3.14E-18 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 Pfam PF12221 Bacterial membrane protein N terminal 3 35 6.0E-12 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 TIGRFAM TIGR01933 hflK: HflK protein 68 345 7.6E-86 T 23-04-2016 IPR010201 HflK GO:0016021 MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 Pfam PF01145 SPFH domain / Band 7 family 69 258 5.6E-25 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 SMART SM00244 66 243 7.2E-18 T 23-04-2016 IPR001107 Band 7 domain MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 PANTHER PTHR10264:SF51 3 378 2.0E-106 T 23-04-2016 IPR010201 HflK GO:0016021 MSIP34_RS08565 d5811b377a3c0ca3a4db5f588a6764d6 394 PANTHER PTHR10264 3 378 2.0E-106 T 23-04-2016 IPR001972 Stomatin family GO:0016020 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.6E-24 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 Gene3D G3DSA:3.30.230.70 12 235 2.8E-32 T 23-04-2016 IPR027408 PNPase/RNase PH domain MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.892 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 Pfam PF03725 3' exoribonuclease family, domain 2 158 222 6.1E-9 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 SUPERFAMILY SSF55666 154 236 1.18E-24 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 PANTHER PTHR11953 1 236 1.8E-85 T 23-04-2016 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 6.6E-117 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 SUPERFAMILY SSF54211 1 181 1.62E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS00235 d7b950602d702e8b5d7d7ee43d65da14 238 PANTHER PTHR11953:SF0 1 236 1.8E-85 T 23-04-2016 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 Pfam PF01835 MG2 domain 633 725 6.5E-13 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 SMART SM01359 995 1176 8.1E-45 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 SMART SM01360 1234 1324 2.0E-19 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 PANTHER PTHR40094 1105 1910 6.7E-62 T 23-04-2016 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 PANTHER PTHR40094 27 1072 6.7E-62 T 23-04-2016 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 Pfam PF00207 Alpha-2-macroglobulin family 1236 1321 9.8E-10 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 996 1176 1.3E-17 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 SUPERFAMILY SSF48239 1438 1688 4.08E-6 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 522 623 4.5E-30 T 23-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 PANTHER PTHR40094:SF1 1105 1910 6.7E-62 T 23-04-2016 MSIP34_RS05490 e237d18d9312812afa2e38cac92f5044 1911 PANTHER PTHR40094:SF1 27 1072 6.7E-62 T 23-04-2016 MSIP34_RS12795 0af24fd38370128abdaca94c62e853b4 167 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 47 88 2.3E-4 T 23-04-2016 IPR001434 Domain of unknown function DUF11 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 1.3E-128 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 SUPERFAMILY SSF102886 5 298 3.53E-135 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PIRSF PIRSF000166 2 299 1.6E-124 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 273 53.64 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 Gene3D G3DSA:3.40.1500.10 4 298 6.8E-131 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PANTHER PTHR10755 9 299 3.8E-170 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 121 143 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 27 43 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 230 257 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 86 110 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 44 65 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 158 187 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS01940 d0456d5afedc866c8679f59f6a1204fd 299 PRINTS PR00073 Coprogen oxidase signature 258 284 1.4E-84 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 MSIP34_RS06305 e067d6f64cc882ce6eab78a6698ce967 925 Pfam PF12705 PD-(D/E)XK nuclease superfamily 633 899 1.2E-21 T 23-04-2016 MSIP34_RS06305 e067d6f64cc882ce6eab78a6698ce967 925 SUPERFAMILY SSF52540 219 581 2.28E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06305 e067d6f64cc882ce6eab78a6698ce967 925 TIGRFAM TIGR03623 TIGR03623: probable DNA repair protein 22 906 1.8E-269 T 23-04-2016 IPR019925 DNA repair protein, predicted MSIP34_RS11500 cbb0dcfffdfe2014f86825a951884c33 153 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 149 1.3E-40 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 MSIP34_RS11500 cbb0dcfffdfe2014f86825a951884c33 153 PANTHER PTHR23091 1 153 3.6E-33 T 23-04-2016 MSIP34_RS11500 cbb0dcfffdfe2014f86825a951884c33 153 Pfam PF00583 Acetyltransferase (GNAT) family 54 127 3.8E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS11500 cbb0dcfffdfe2014f86825a951884c33 153 SUPERFAMILY SSF55729 9 150 2.87E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS11500 cbb0dcfffdfe2014f86825a951884c33 153 Gene3D G3DSA:3.40.630.30 9 151 3.1E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS11500 cbb0dcfffdfe2014f86825a951884c33 153 PANTHER PTHR23091:SF247 1 153 3.6E-33 T 23-04-2016 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 25.16 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 354 533 1.9E-72 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PANTHER PTHR12428:SF14 173 538 6.3E-111 T 23-04-2016 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 Pfam PF14849 YidC periplasmic domain 72 344 3.3E-91 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 78 99 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 252 267 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 499 522 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 416 439 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 325 345 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 463 485 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 219 237 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR00701 60kDa inner membrane protein signature 166 186 2.6E-81 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 Pfam PF02096 60Kd inner membrane protein 355 533 2.3E-61 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 353 2.5E-119 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR01900 YidC translocation/secretion protein signature 340 356 1.1E-23 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR01900 YidC translocation/secretion protein signature 469 484 1.1E-23 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 1.1E-23 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS14175 6ffa19384850385b3f20e83ff0532aba 549 PANTHER PTHR12428 173 538 6.3E-111 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 SUPERFAMILY SSF52833 487 598 2.35E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 Pfam PF13899 Thioredoxin-like 505 576 1.2E-11 T 23-04-2016 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 SUPERFAMILY SSF74863 38 157 3.53E-29 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 194 402 1.8E-19 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 ProSitePatterns PS00194 Thioredoxin family active site. 513 531 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 PANTHER PTHR32234 8 609 3.2E-158 T 23-04-2016 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 PANTHER PTHR32234:SF0 8 609 3.2E-158 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 Gene3D G3DSA:2.60.40.1250 35 158 1.3E-34 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 Pfam PF11412 Disulphide bond corrector protein DsbC 41 156 1.9E-29 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 605 33.957 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 MSIP34_RS00135 0a1e85ba9ba52a44f028ad7f74484d12 613 Gene3D G3DSA:3.40.30.10 494 600 1.8E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 223 8.8E-54 T 23-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 242 3.7E-21 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 2.0E-36 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 SUPERFAMILY SSF117143 77 204 6.02E-20 T 23-04-2016 MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 PANTHER PTHR30435 1 242 1.7E-86 T 23-04-2016 MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 Pfam PF00460 Flagella basal body rod protein 5 35 2.3E-4 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MSIP34_RS03960 33b4fab58f3447090760d05ce120df22 246 PANTHER PTHR30435:SF18 1 242 1.7E-86 T 23-04-2016 MSIP34_RS05415 aeedb067fac0bc926954549216ea22ab 602 Pfam PF03814 Potassium-transporting ATPase A subunit 11 596 5.9E-245 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MSIP34_RS05415 aeedb067fac0bc926954549216ea22ab 602 PANTHER PTHR30607 245 602 0.0 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MSIP34_RS05415 aeedb067fac0bc926954549216ea22ab 602 PANTHER PTHR30607 2 215 0.0 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MSIP34_RS05415 aeedb067fac0bc926954549216ea22ab 602 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 598 36.606 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MSIP34_RS05415 aeedb067fac0bc926954549216ea22ab 602 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 236 598 7.8E-165 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MSIP34_RS05415 aeedb067fac0bc926954549216ea22ab 602 PIRSF PIRSF001294 1 600 8.3E-244 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 MSIP34_RS08910 5eb444367d69ba2c8ff5cdf6b2cea12c 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 138 2.8E-31 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 MSIP34_RS08910 5eb444367d69ba2c8ff5cdf6b2cea12c 141 PANTHER PTHR30558:SF3 16 141 5.5E-32 T 23-04-2016 MSIP34_RS08910 5eb444367d69ba2c8ff5cdf6b2cea12c 141 PANTHER PTHR30558 16 141 5.5E-32 T 23-04-2016 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PANTHER PTHR11706 35 443 9.5E-191 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 326 345 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 117 143 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 371 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 170 191 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 145 164 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 386 405 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 222 245 3.7E-53 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 36 410 1.6E-115 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 442 37.781 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS02440 bbc2c342fb7a00a3919b6661d0784e40 444 Pfam PF01566 Natural resistance-associated macrophage protein 58 416 1.7E-132 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS09665 c78844773c1f18516923d10dd513b44c 304 Gene3D G3DSA:3.40.50.2000 10 104 8.6E-20 T 23-04-2016 MSIP34_RS09665 c78844773c1f18516923d10dd513b44c 304 PANTHER PTHR30160:SF7 10 282 9.2E-25 T 23-04-2016 MSIP34_RS09665 c78844773c1f18516923d10dd513b44c 304 Gene3D G3DSA:3.40.50.2000 160 296 1.5E-24 T 23-04-2016 MSIP34_RS09665 c78844773c1f18516923d10dd513b44c 304 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 142 264 8.1E-21 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS09665 c78844773c1f18516923d10dd513b44c 304 SUPERFAMILY SSF53756 9 300 1.36E-55 T 23-04-2016 MSIP34_RS09665 c78844773c1f18516923d10dd513b44c 304 PANTHER PTHR30160 10 282 9.2E-25 T 23-04-2016 MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 PANTHER PTHR10909:SF299 104 303 3.3E-90 T 23-04-2016 MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 270 7.6E-30 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 Gene3D G3DSA:3.40.50.620 1 181 3.2E-53 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 Gene3D G3DSA:3.40.50.1220 184 307 5.8E-53 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 SMART SM00893 3 181 4.6E-40 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 Pfam PF01012 Electron transfer flavoprotein domain 3 169 2.6E-34 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 SUPERFAMILY SSF52467 188 306 4.5E-41 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 PIRSF PIRSF000089 1 308 6.8E-97 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 PANTHER PTHR10909 104 303 3.3E-90 T 23-04-2016 MSIP34_RS09755 df02e5a8f7e73afda6541a754bf19764 308 SUPERFAMILY SSF52402 2 182 1.4E-47 T 23-04-2016 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 143 7.0E-66 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 Pfam PF04060 Putative Fe-S cluster 9 41 5.6E-15 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 PANTHER PTHR11938 1 130 4.8E-52 T 23-04-2016 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 SUPERFAMILY SSF54862 5 136 9.42E-29 T 23-04-2016 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 Pfam PF14697 4Fe-4S dicluster domain 74 128 4.7E-18 T 23-04-2016 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 PANTHER PTHR11938:SF64 1 130 4.8E-52 T 23-04-2016 MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 81 92 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site MSIP34_RS09095 6d8ce870fa58073a659324b68f250280 260 Gene3D G3DSA:3.30.70.20 64 130 2.2E-16 T 23-04-2016 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 SMART SM00228 101 172 3.5E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 Pfam PF03572 Peptidase family S41 200 380 8.8E-56 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 SMART SM00245 174 381 2.8E-68 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 PANTHER PTHR32060 56 403 2.9E-119 T 23-04-2016 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 Gene3D G3DSA:3.30.750.44 56 106 5.1E-9 T 23-04-2016 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 Pfam PF13180 PDZ domain 101 181 1.2E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 SUPERFAMILY SSF52096 36 119 1.19E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 SUPERFAMILY SSF52096 193 385 1.19E-80 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 386 1.8E-102 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 Gene3D G3DSA:2.30.42.10 107 183 1.1E-29 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 SUPERFAMILY SSF50156 92 184 3.87E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 Gene3D G3DSA:3.90.226.10 444 465 2.6E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS02240 7b0495bc4936e9658debcb7568f390c6 471 Gene3D G3DSA:3.90.226.10 184 383 2.6E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain MSIP34_RS04565 8c37207012fe7f493fd2164cb79f3375 124 SUPERFAMILY SSF101386 4 115 5.49E-37 T 23-04-2016 MSIP34_RS04565 8c37207012fe7f493fd2164cb79f3375 124 PANTHER PTHR14552 4 116 2.9E-38 T 23-04-2016 MSIP34_RS04565 8c37207012fe7f493fd2164cb79f3375 124 Gene3D G3DSA:1.10.287.1080 4 95 1.9E-23 T 23-04-2016 MSIP34_RS04565 8c37207012fe7f493fd2164cb79f3375 124 PIRSF PIRSF029826 1 116 2.3E-44 T 23-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 MSIP34_RS04565 8c37207012fe7f493fd2164cb79f3375 124 Pfam PF12643 MazG-like family 36 114 5.9E-10 T 23-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 Gene3D G3DSA:3.30.230.10 6 120 1.2E-28 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 SUPERFAMILY SSF54211 8 118 1.04E-26 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 90 2.0E-24 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 8 117 16.487 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 Pfam PF00825 Ribonuclease P 8 114 2.7E-26 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 16 115 1.6E-18 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 MSIP34_RS14180 1d456d9699f5d8c8ba10845e925be3e7 125 PANTHER PTHR33992 4 118 6.1E-21 T 23-04-2016 MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 SMART SM01323 15 97 5.7E-44 T 23-04-2016 IPR003849 Preprotein translocase YajC MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 18 97 2.3E-29 T 23-04-2016 IPR003849 Preprotein translocase YajC MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 Pfam PF02699 Preprotein translocase subunit 19 94 8.1E-31 T 23-04-2016 IPR003849 Preprotein translocase YajC MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 PANTHER PTHR33909:SF1 1 105 4.5E-28 T 23-04-2016 MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 PRINTS PR01853 Bacterial YajC preprotein translocase signature 17 37 1.8E-17 T 23-04-2016 IPR003849 Preprotein translocase YajC MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 PRINTS PR01853 Bacterial YajC preprotein translocase signature 55 73 1.8E-17 T 23-04-2016 IPR003849 Preprotein translocase YajC MSIP34_RS11225 249428cfeef64fba30b1820d3ec3e595 105 PANTHER PTHR33909 1 105 4.5E-28 T 23-04-2016 MSIP34_RS10645 834b79d6e2a0a624261f54aab8a15fb0 300 PANTHER PTHR30535:SF4 40 293 4.2E-83 T 23-04-2016 MSIP34_RS10645 834b79d6e2a0a624261f54aab8a15fb0 300 SUPERFAMILY SSF53807 40 293 4.71E-50 T 23-04-2016 MSIP34_RS10645 834b79d6e2a0a624261f54aab8a15fb0 300 Gene3D G3DSA:3.40.50.1980 40 158 5.5E-25 T 23-04-2016 MSIP34_RS10645 834b79d6e2a0a624261f54aab8a15fb0 300 Pfam PF01497 Periplasmic binding protein 43 270 3.4E-33 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 MSIP34_RS10645 834b79d6e2a0a624261f54aab8a15fb0 300 PANTHER PTHR30535 40 293 4.2E-83 T 23-04-2016 MSIP34_RS10645 834b79d6e2a0a624261f54aab8a15fb0 300 Gene3D G3DSA:3.40.50.1980 171 293 1.1E-20 T 23-04-2016 MSIP34_RS01900 b2c0517b12de884778601633d3805c52 260 PANTHER PTHR30589 1 260 6.1E-104 T 23-04-2016 MSIP34_RS01900 b2c0517b12de884778601633d3805c52 260 PANTHER PTHR30589:SF0 1 260 6.1E-104 T 23-04-2016 MSIP34_RS01900 b2c0517b12de884778601633d3805c52 260 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 259 1.7E-79 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 MSIP34_RS01900 b2c0517b12de884778601633d3805c52 260 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 253 2.3E-83 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 MSIP34_RS01900 b2c0517b12de884778601633d3805c52 260 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 259 19.782 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 MSIP34_RS01900 b2c0517b12de884778601633d3805c52 260 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 MSIP34_RS05305 b882d93712e024f69c973abeef8c20e2 188 Pfam PF00578 AhpC/TSA family 40 164 8.6E-40 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS05305 b882d93712e024f69c973abeef8c20e2 188 PANTHER PTHR10681 2 185 2.8E-53 T 23-04-2016 MSIP34_RS05305 b882d93712e024f69c973abeef8c20e2 188 SUPERFAMILY SSF52833 36 185 1.04E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS05305 b882d93712e024f69c973abeef8c20e2 188 Gene3D G3DSA:3.40.30.10 31 185 3.0E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 306 325 5.0E-7 T 23-04-2016 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 288 305 5.0E-7 T 23-04-2016 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 90 5.0E-7 T 23-04-2016 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 259 285 5.0E-7 T 23-04-2016 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 Gene3D G3DSA:2.40.160.20 18 212 3.4E-19 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 Pfam PF13505 Outer membrane protein beta-barrel domain 10 190 1.7E-18 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PANTHER PTHR30128 177 349 6.1E-35 T 23-04-2016 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 SUPERFAMILY SSF56925 29 194 1.05E-21 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 Gene3D G3DSA:3.30.1330.60 231 349 2.2E-39 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01021 OMPA domain signature 288 304 7.9E-18 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01021 OMPA domain signature 241 263 7.9E-18 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 PRINTS PR01021 OMPA domain signature 273 288 7.9E-18 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 Pfam PF00691 OmpA family 240 331 4.6E-21 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS08520 589709fcb30710d29e4a1f7b53c14d49 356 SUPERFAMILY SSF103088 233 349 6.67E-32 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS01075 6933534be3d3386adcce88beb3fa9e50 185 Gene3D G3DSA:2.60.450.10 22 170 4.8E-34 T 23-04-2016 MSIP34_RS01075 6933534be3d3386adcce88beb3fa9e50 185 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 11 173 26.192 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 MSIP34_RS01075 6933534be3d3386adcce88beb3fa9e50 185 PANTHER PTHR36504 1 175 8.4E-19 T 23-04-2016 MSIP34_RS01075 6933534be3d3386adcce88beb3fa9e50 185 Pfam PF03968 OstA-like protein 33 145 1.1E-28 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal MSIP34_RS01075 6933534be3d3386adcce88beb3fa9e50 185 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 173 1.1E-43 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 Gene3D G3DSA:3.40.50.720 2 251 1.6E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 Pfam PF00899 ThiF family 12 250 6.7E-37 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 SUPERFAMILY SSF69572 3 189 5.23E-55 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 SUPERFAMILY SSF69572 214 251 5.23E-55 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 PANTHER PTHR10953:SF159 2 157 4.2E-89 T 23-04-2016 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 PANTHER PTHR10953:SF159 195 251 4.2E-89 T 23-04-2016 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 PANTHER PTHR10953 2 157 4.2E-89 T 23-04-2016 MSIP34_RS08975 ad72f2e6fc901eccc0a035f163a31db3 252 PANTHER PTHR10953 195 251 4.2E-89 T 23-04-2016 MSIP34_RS00770 d2aa056e5ca4d0dcc9f1a712ba4b6d02 175 PIRSF PIRSF006135 2 175 2.4E-53 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 MSIP34_RS00770 d2aa056e5ca4d0dcc9f1a712ba4b6d02 175 PANTHER PTHR34848 4 175 3.8E-65 T 23-04-2016 MSIP34_RS00770 d2aa056e5ca4d0dcc9f1a712ba4b6d02 175 Gene3D G3DSA:3.40.50.300 4 174 7.6E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00770 d2aa056e5ca4d0dcc9f1a712ba4b6d02 175 SUPERFAMILY SSF52540 4 174 1.43E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00770 d2aa056e5ca4d0dcc9f1a712ba4b6d02 175 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 173 2.3E-58 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 MSIP34_RS10100 b066dd41c48d90aacf509c60330df9ef 274 SUPERFAMILY SSF109604 14 264 3.18E-28 T 23-04-2016 MSIP34_RS10100 b066dd41c48d90aacf509c60330df9ef 274 Pfam PF08668 HDOD domain 21 213 1.5E-11 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS10100 b066dd41c48d90aacf509c60330df9ef 274 Gene3D G3DSA:1.10.3150.10 18 265 9.1E-35 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD MSIP34_RS10670 2fad7ed1f3560aa445c2bc27f2987d9c 155 PANTHER PTHR22881 1 146 2.6E-47 T 23-04-2016 MSIP34_RS10670 2fad7ed1f3560aa445c2bc27f2987d9c 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 137 1.1E-33 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 MSIP34_RS10670 2fad7ed1f3560aa445c2bc27f2987d9c 155 Gene3D G3DSA:3.40.390.30 16 145 2.1E-46 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 MSIP34_RS10670 2fad7ed1f3560aa445c2bc27f2987d9c 155 SUPERFAMILY SSF55486 3 142 2.93E-44 T 23-04-2016 MSIP34_RS10670 2fad7ed1f3560aa445c2bc27f2987d9c 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 140 23.648 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 MSIP34_RS10670 2fad7ed1f3560aa445c2bc27f2987d9c 155 Pfam PF02130 Uncharacterized protein family UPF0054 16 136 3.0E-35 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 MSIP34_RS01110 5bd82d89a0792b6b8d073f8eff51b3c1 161 SUPERFAMILY SSF55040 11 155 2.22E-60 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 MSIP34_RS01110 5bd82d89a0792b6b8d073f8eff51b3c1 161 Pfam PF01967 MoaC family 15 150 1.3E-53 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 MSIP34_RS01110 5bd82d89a0792b6b8d073f8eff51b3c1 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 4.0E-61 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 MSIP34_RS01110 5bd82d89a0792b6b8d073f8eff51b3c1 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 35.702 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 MSIP34_RS01110 5bd82d89a0792b6b8d073f8eff51b3c1 161 PANTHER PTHR22960 1 158 5.4E-90 T 23-04-2016 MSIP34_RS01110 5bd82d89a0792b6b8d073f8eff51b3c1 161 Gene3D G3DSA:3.30.70.640 3 157 9.8E-68 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 SUPERFAMILY SSF52540 7 226 2.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 PANTHER PTHR24220:SF111 7 227 7.8E-112 T 23-04-2016 MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 Gene3D G3DSA:3.40.50.300 5 226 1.3E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 222 4.0E-96 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 Pfam PF00005 ABC transporter 23 171 1.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 PANTHER PTHR24220 7 227 7.8E-112 T 23-04-2016 MSIP34_RS03215 f5f997c33759a67119f4c89af0090a49 234 SMART SM00382 32 219 3.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 457 5.2E-90 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 PANTHER PTHR30290 1 552 9.4E-137 T 23-04-2016 MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 PIRSF PIRSF002741 7 546 4.0E-137 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 Gene3D G3DSA:3.10.105.10 291 510 3.7E-67 T 23-04-2016 MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 Gene3D G3DSA:3.90.76.10 57 215 2.3E-36 T 23-04-2016 MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 PANTHER PTHR30290:SF9 1 552 9.4E-137 T 23-04-2016 MSIP34_RS07385 c503b2921f71b1da2adf7e204f337aba 554 SUPERFAMILY SSF53850 44 543 3.8E-134 T 23-04-2016 MSIP34_RS03890 27d655087ef45d201147490fc8d76b3a 414 PRINTS PR01007 Flagellar hook-length control protein signature 337 360 3.4E-11 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 MSIP34_RS03890 27d655087ef45d201147490fc8d76b3a 414 PRINTS PR01007 Flagellar hook-length control protein signature 279 301 3.4E-11 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 MSIP34_RS03890 27d655087ef45d201147490fc8d76b3a 414 PRINTS PR01007 Flagellar hook-length control protein signature 304 322 3.4E-11 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 MSIP34_RS03890 27d655087ef45d201147490fc8d76b3a 414 PRINTS PR01007 Flagellar hook-length control protein signature 397 413 3.4E-11 T 23-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 MSIP34_RS03890 27d655087ef45d201147490fc8d76b3a 414 Pfam PF02120 Flagellar hook-length control protein FliK 289 372 5.3E-21 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal MSIP34_RS03890 27d655087ef45d201147490fc8d76b3a 414 PANTHER PTHR37533 147 414 1.8E-29 T 23-04-2016 MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 Gene3D G3DSA:3.40.50.300 9 219 3.2E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 12 182 1.8E-47 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 PANTHER PTHR21343:SF13 8 233 4.4E-84 T 23-04-2016 MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 PANTHER PTHR21343 8 233 4.4E-84 T 23-04-2016 MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 Pfam PF13500 AAA domain 11 214 3.6E-39 T 23-04-2016 MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 PIRSF PIRSF006755 7 232 1.9E-68 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 SUPERFAMILY SSF52540 9 216 2.89E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS02890 636cbe698c5717e202067220dfdaa333 242 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 8 218 28.75 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 MSIP34_RS09405 f23e272def50dd29f5a0becce982f615 334 Gene3D G3DSA:3.40.190.10 31 175 5.4E-36 T 23-04-2016 MSIP34_RS09405 f23e272def50dd29f5a0becce982f615 334 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 18 295 2.9E-99 T 23-04-2016 IPR011862 Phosphate binding protein GO:0006810 MSIP34_RS09405 f23e272def50dd29f5a0becce982f615 334 Pfam PF12727 PBP superfamily domain 47 279 1.2E-34 T 23-04-2016 IPR024370 PBP domain MSIP34_RS09405 f23e272def50dd29f5a0becce982f615 334 SUPERFAMILY SSF53850 22 310 2.06E-74 T 23-04-2016 MSIP34_RS09405 f23e272def50dd29f5a0becce982f615 334 PANTHER PTHR30570:SF1 1 332 1.2E-98 T 23-04-2016 MSIP34_RS09405 f23e272def50dd29f5a0becce982f615 334 PANTHER PTHR30570 1 332 1.2E-98 T 23-04-2016 MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 Gene3D G3DSA:3.40.50.300 1 242 1.8E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 Gene3D G3DSA:3.40.50.300 258 499 1.0E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 PANTHER PTHR34383 4 488 5.3E-241 T 23-04-2016 MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 SUPERFAMILY SSF52540 41 238 1.78E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 PANTHER PTHR34383:SF3 4 488 5.3E-241 T 23-04-2016 MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 491 9.1E-225 T 23-04-2016 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 SUPERFAMILY SSF52540 299 483 1.26E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 10 234 1.4E-45 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related MSIP34_RS05850 93c50fe0f35abb5b1fd7189c672e05b4 502 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 269 492 1.2E-87 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 451 548 1.8E-13 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 271 1.5E-39 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Gene3D G3DSA:3.30.413.10 408 548 2.2E-38 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Gene3D G3DSA:3.90.480.10 48 117 1.4E-38 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Gene3D G3DSA:3.90.480.10 321 403 1.4E-38 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 SUPERFAMILY SSF56014 120 285 1.83E-46 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 SUPERFAMILY SSF56014 409 550 4.32E-41 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 PANTHER PTHR11493:SF47 327 556 3.4E-151 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 PANTHER PTHR11493:SF47 1 294 3.4E-151 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 SUPERFAMILY SSF55124 1 126 2.13E-31 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 PANTHER PTHR11493 327 556 3.4E-151 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 PANTHER PTHR11493 1 294 3.4E-151 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Gene3D G3DSA:3.30.413.10 120 278 1.1E-41 T 23-04-2016 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 2.5E-16 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 328 398 2.8E-16 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 SUPERFAMILY SSF55124 315 421 1.14E-26 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS07725 9501597fd22e940396a1d930c3d084b5 556 SUPERFAMILY SSF55124 252 276 1.14E-26 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 MSIP34_RS01985 c98b8aa3e0df1c7deee9faac619c7f8b 89 Pfam PF04324 BFD-like [2Fe-2S] binding domain 13 60 3.1E-10 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain MSIP34_RS00485 9cdb4981d57bf643f882a0ad281ddf37 249 PANTHER PTHR10953 1 246 1.2E-95 T 23-04-2016 MSIP34_RS00485 9cdb4981d57bf643f882a0ad281ddf37 249 SUPERFAMILY SSF69572 2 246 2.35E-86 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MSIP34_RS00485 9cdb4981d57bf643f882a0ad281ddf37 249 PANTHER PTHR10953:SF158 1 246 1.2E-95 T 23-04-2016 MSIP34_RS00485 9cdb4981d57bf643f882a0ad281ddf37 249 Gene3D G3DSA:3.40.50.720 4 247 7.5E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00485 9cdb4981d57bf643f882a0ad281ddf37 249 Pfam PF00899 ThiF family 9 243 5.4E-64 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 SUPERFAMILY SSF116734 320 344 1.36E-39 T 23-04-2016 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 SUPERFAMILY SSF116734 369 569 4.25E-34 T 23-04-2016 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 PANTHER PTHR30408:SF7 91 270 2.2E-26 T 23-04-2016 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 PANTHER PTHR30408 91 270 2.2E-26 T 23-04-2016 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 Pfam PF01420 Type I restriction modification DNA specificity domain 102 275 3.1E-12 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 Pfam PF01420 Type I restriction modification DNA specificity domain 444 562 2.2E-8 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 MSIP34_RS05570 d00b547d26fbe0cfad2abeef3346e020 795 SUPERFAMILY SSF116734 87 274 1.36E-39 T 23-04-2016 MSIP34_RS06145 05a84ef34ebfdc4612c59ae5a3c97fee 191 SUPERFAMILY SSF52833 36 190 8.93E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS06145 05a84ef34ebfdc4612c59ae5a3c97fee 191 Pfam PF02630 SCO1/SenC 11 176 6.2E-41 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC MSIP34_RS06145 05a84ef34ebfdc4612c59ae5a3c97fee 191 Gene3D G3DSA:3.40.30.10 6 191 1.6E-59 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS06145 05a84ef34ebfdc4612c59ae5a3c97fee 191 PANTHER PTHR12151 41 191 3.0E-54 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 PANTHER PTHR11808:SF12 264 423 2.1E-245 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 PANTHER PTHR11808:SF12 1 234 2.1E-245 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 Gene3D G3DSA:3.40.640.10 2 285 1.7E-123 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 Gene3D G3DSA:3.90.1150.10 287 423 1.8E-52 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 PANTHER PTHR11808 264 423 2.1E-245 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 PANTHER PTHR11808 1 234 2.1E-245 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 SUPERFAMILY SSF53383 1 420 2.93E-133 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 1.8E-146 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 1.9E-199 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 MSIP34_RS09800 3d934d9a4418cf38e37c67bdd0821e48 423 PIRSF PIRSF001434 1 423 4.1E-139 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 PANTHER PTHR30097 53 389 1.6E-68 T 23-04-2016 MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 67 307 1.6E-66 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 SUPERFAMILY SSF111369 80 311 1.22E-19 T 23-04-2016 MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 57 383 1.2E-43 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 PANTHER PTHR30097:SF4 53 389 1.6E-68 T 23-04-2016 MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 Gene3D G3DSA:2.40.50.100 85 117 2.3E-10 T 23-04-2016 MSIP34_RS11295 91709da3f0b34643903043c88c4900a5 389 Gene3D G3DSA:2.40.50.100 201 232 2.3E-10 T 23-04-2016 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 Gene3D G3DSA:3.40.50.1100 135 305 2.6E-77 T 23-04-2016 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 6.0E-138 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 1.2E-70 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 PANTHER PTHR10314:SF110 1 309 7.1E-169 T 23-04-2016 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 SUPERFAMILY SSF53686 2 305 1.31E-102 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 Gene3D G3DSA:3.40.50.1100 38 134 1.4E-37 T 23-04-2016 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 7.1E-134 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 MSIP34_RS03310 2c2986da209b256e28a5b0ce7999494f 310 PANTHER PTHR10314 1 309 7.1E-169 T 23-04-2016 MSIP34_RS13480 8ef0efdd06bd1fd474041dc2d5998c74 498 Pfam PF13372 Alginate export 103 489 8.3E-87 T 23-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Pfam PF13432 Tetratricopeptide repeat 7 70 7.9E-4 T 23-04-2016 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Pfam PF13414 TPR repeat 187 224 2.3E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Gene3D G3DSA:1.25.40.10 3 261 5.1E-64 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 PANTHER PTHR23083 15 246 1.7E-51 T 23-04-2016 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 PANTHER PTHR23083 435 443 1.7E-51 T 23-04-2016 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SUPERFAMILY SSF48452 5 250 7.86E-45 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Pfam PF13424 Tetratricopeptide repeat 71 134 1.7E-8 T 23-04-2016 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 3 36 9.4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 180 213 1.4E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 146 179 2.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 71 104 0.41 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 214 247 2.5E-9 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 105 138 1.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 SMART SM00028 37 70 9.8 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Pfam PF13844 Glycosyl transferase family 41 500 693 6.7E-54 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Pfam PF13844 Glycosyl transferase family 41 336 487 2.5E-39 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 MSIP34_RS06605 02c3d2d21dfa3b2b0294433b0a608066 697 Pfam PF07719 Tetratricopeptide repeat 150 179 7.0E-7 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 MSIP34_RS13190 8f957cfc3088b781e5b599fa83505d9b 186 Pfam PF00857 Isochorismatase family 14 163 4.2E-25 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS13190 8f957cfc3088b781e5b599fa83505d9b 186 PANTHER PTHR14119:SF3 15 186 1.5E-51 T 23-04-2016 MSIP34_RS13190 8f957cfc3088b781e5b599fa83505d9b 186 Gene3D G3DSA:3.40.50.850 13 186 1.9E-54 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS13190 8f957cfc3088b781e5b599fa83505d9b 186 SUPERFAMILY SSF52499 13 186 1.19E-44 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS13190 8f957cfc3088b781e5b599fa83505d9b 186 PANTHER PTHR14119 15 186 1.5E-51 T 23-04-2016 MSIP34_RS01930 c66f5e3aa4daa7d3f476ebb0cb48e511 468 PANTHER PTHR11785 4 465 1.6E-164 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS01930 c66f5e3aa4daa7d3f476ebb0cb48e511 468 Pfam PF13520 Amino acid permease 23 451 1.0E-51 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS01930 c66f5e3aa4daa7d3f476ebb0cb48e511 468 PANTHER PTHR11785:SF405 4 465 1.6E-164 T 23-04-2016 MSIP34_RS01930 c66f5e3aa4daa7d3f476ebb0cb48e511 468 PIRSF PIRSF006060 7 467 5.7E-91 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 SMART SM00382 122 256 0.0041 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 PANTHER PTHR30486:SF6 2 345 1.3E-194 T 23-04-2016 MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 Pfam PF00437 Type II/IV secretion system protein 12 265 1.0E-47 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 343 6.0E-156 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 Gene3D G3DSA:3.40.50.300 100 341 7.7E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 SUPERFAMILY SSF52540 5 335 2.52E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03160 11e2736adb1636784313f42057fe1951 347 PANTHER PTHR30486 2 345 1.3E-194 T 23-04-2016 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 Pfam PF00589 Phage integrase family 108 274 7.9E-46 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 PANTHER PTHR30349:SF17 1 292 7.5E-129 T 23-04-2016 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 PANTHER PTHR30349 1 292 7.5E-129 T 23-04-2016 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 291 7.1E-108 T 23-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 SUPERFAMILY SSF56349 3 282 5.0E-56 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 Gene3D G3DSA:1.10.150.130 3 94 7.5E-23 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 85 2.1E-18 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 289 34.134 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD MSIP34_RS00915 18f4a8c5c1e1c605a4f4efc1ffcd6123 292 Gene3D G3DSA:1.10.443.10 107 283 5.6E-53 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 282 403 1.2E-36 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 Gene3D G3DSA:1.20.810.10 10 423 6.7E-157 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 Pfam PF00033 Cytochrome b/b6/petB 27 215 4.8E-66 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 PIRSF PIRSF038885 2 427 4.4E-155 T 23-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 PANTHER PTHR19271:SF9 5 425 1.2E-226 T 23-04-2016 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 SUPERFAMILY SSF81342 11 284 6.75E-97 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 PANTHER PTHR19271 5 425 1.2E-226 T 23-04-2016 MSIP34_RS01465 f9dd434639d1e59c2938394397c56313 427 SUPERFAMILY SSF81648 285 419 4.09E-23 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 MSIP34_RS05925 1bec3e08fcf80f5ad32b54ddf6aaa95a 537 SUPERFAMILY SSF103515 251 537 6.02E-61 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS05925 1bec3e08fcf80f5ad32b54ddf6aaa95a 537 Gene3D G3DSA:2.40.128.130 260 537 9.7E-63 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS05925 1bec3e08fcf80f5ad32b54ddf6aaa95a 537 SMART SM00869 262 527 1.4E-52 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS05925 1bec3e08fcf80f5ad32b54ddf6aaa95a 537 Pfam PF03797 Autotransporter beta-domain 260 521 5.3E-53 T 23-04-2016 IPR005546 Autotransporter beta-domain MSIP34_RS05925 1bec3e08fcf80f5ad32b54ddf6aaa95a 537 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 247 537 9.3E-34 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 MSIP34_RS11340 ae8fbc3467851648a5798fbc174ad623 232 SMART SM00240 22 72 4.7E-10 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 MSIP34_RS11340 ae8fbc3467851648a5798fbc174ad623 232 SUPERFAMILY SSF49879 2 98 5.74E-26 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 MSIP34_RS11340 ae8fbc3467851648a5798fbc174ad623 232 Gene3D G3DSA:2.60.200.20 10 99 2.4E-23 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 MSIP34_RS11340 ae8fbc3467851648a5798fbc174ad623 232 Pfam PF00498 FHA domain 24 86 6.3E-17 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 MSIP34_RS06110 362e2b661ede74a06bdde94ff0bc6c0c 357 SUPERFAMILY SSF55729 194 332 1.59E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS06110 362e2b661ede74a06bdde94ff0bc6c0c 357 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 192 353 1.5E-11 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition MSIP34_RS06110 362e2b661ede74a06bdde94ff0bc6c0c 357 Gene3D G3DSA:3.40.630.30 190 331 1.0E-8 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 PANTHER PTHR30308 3 150 2.4E-69 T 23-04-2016 MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 3.0E-66 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 PANTHER PTHR30308:SF2 3 150 2.4E-69 T 23-04-2016 MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 69.58 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 SUPERFAMILY SSF74982 3 127 3.01E-49 T 23-04-2016 IPR023620 Small protein B MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 4.3E-53 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 Pfam PF01668 SmpB protein 3 64 2.0E-28 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 MSIP34_RS06265 f26cf5bac5d3ed4e3c18cdae78e3b3b2 152 Gene3D G3DSA:2.40.280.10 3 122 9.3E-49 T 23-04-2016 IPR023620 Small protein B MSIP34_RS04985 7ebd0f618ec41562a898d8b5afebf86a 189 PANTHER PTHR30546 1 186 9.3E-31 T 23-04-2016 MSIP34_RS04985 7ebd0f618ec41562a898d8b5afebf86a 189 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 MSIP34_RS04985 7ebd0f618ec41562a898d8b5afebf86a 189 Gene3D G3DSA:3.40.50.360 1 187 7.0E-60 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS04985 7ebd0f618ec41562a898d8b5afebf86a 189 PANTHER PTHR30546:SF0 1 186 9.3E-31 T 23-04-2016 MSIP34_RS04985 7ebd0f618ec41562a898d8b5afebf86a 189 SUPERFAMILY SSF52218 1 186 2.49E-48 T 23-04-2016 IPR029039 Flavoprotein-like domain MSIP34_RS04985 7ebd0f618ec41562a898d8b5afebf86a 189 Pfam PF03358 NADPH-dependent FMN reductase 38 104 1.0E-12 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 MSIP34_RS10115 d311fc454b5c5c4bb12c5292cc3e2b1a 295 Pfam PF14238 Domain of unknown function (DUF4340) 70 240 2.7E-16 T 23-04-2016 IPR025641 Domain of unknown function DUF4340 MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 Pfam PF06725 3D domain 326 399 2.3E-24 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 PIRSF PIRSF019422 1 407 1.0E-131 T 23-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 PANTHER PTHR30124 67 401 8.6E-112 T 23-04-2016 MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 PANTHER PTHR30124:SF0 67 401 8.6E-112 T 23-04-2016 MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 SUPERFAMILY SSF50685 63 404 6.28E-135 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 Gene3D G3DSA:2.40.40.10 64 207 5.0E-33 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 Gene3D G3DSA:2.40.40.10 216 404 3.7E-56 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 Pfam PF03562 MltA specific insert domain 75 305 3.4E-84 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 MSIP34_RS13930 87374a512a21eda2205d3c8575dfd179 413 SMART SM00925 148 305 2.1E-93 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 Gene3D G3DSA:1.10.150.20 47 77 1.8E-6 T 23-04-2016 MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 Gene3D G3DSA:3.40.140.10 100 224 6.7E-48 T 23-04-2016 MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 SUPERFAMILY SSF47781 17 90 1.93E-11 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 PANTHER PTHR30471:SF5 1 224 1.9E-117 T 23-04-2016 MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 5.5E-74 T 23-04-2016 IPR001405 RadC protein MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 Pfam PF04002 RadC-like JAB domain 104 223 1.3E-42 T 23-04-2016 IPR025657 RadC-like JAB domain MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site MSIP34_RS01760 e3d977eb8601c5ac00d288a7003650d0 224 PANTHER PTHR30471 1 224 1.9E-117 T 23-04-2016 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 Gene3D G3DSA:3.40.50.880 642 797 4.8E-41 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 SUPERFAMILY SSF52317 642 760 8.33E-19 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PRINTS PR00067 Catalase signature 140 163 1.1E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PRINTS PR00067 Catalase signature 444 470 1.1E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PRINTS PR00067 Catalase signature 203 221 1.1E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PRINTS PR00067 Catalase signature 224 241 1.1E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PRINTS PR00067 Catalase signature 412 439 1.1E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PRINTS PR00067 Catalase signature 243 261 1.1E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 SUPERFAMILY SSF56634 108 611 4.71E-219 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 Pfam PF00199 Catalase 127 511 1.1E-179 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 Pfam PF06628 Catalase-related immune-responsive 541 604 2.7E-22 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PANTHER PTHR11465 105 676 0.0 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 Gene3D G3DSA:2.40.180.10 109 482 1.4E-179 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 Pfam PF01965 DJ-1/PfpI family 643 754 1.8E-9 T 23-04-2016 IPR002818 DJ-1/PfpI MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PIRSF PIRSF038927 91 798 0.0 T 23-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 SMART SM01060 127 515 3.6E-278 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 PANTHER PTHR11465:SF7 105 676 0.0 T 23-04-2016 MSIP34_RS11055 30cf9289a3535dd5af0b46fe43a9da1d 799 ProSitePatterns PS00438 Catalase proximal active site signature. 163 179 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 Gene3D G3DSA:3.30.420.40 143 321 1.6E-73 T 23-04-2016 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 363 7.9E-143 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 SUPERFAMILY SSF53067 66 111 4.25E-27 T 23-04-2016 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 SUPERFAMILY SSF53067 141 318 4.25E-27 T 23-04-2016 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 SUPERFAMILY SSF53067 5 39 4.25E-27 T 23-04-2016 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 PANTHER PTHR30605 1 362 3.6E-154 T 23-04-2016 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 PANTHER PTHR30605:SF0 1 362 3.6E-154 T 23-04-2016 MSIP34_RS00325 cb3341d75017e03d39eb8a2d09f3a076 364 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 364 42.182 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 MSIP34_RS07985 cae96234ffa398e632ad144011997399 98 Gene3D G3DSA:1.20.5.570 55 69 1.9E-4 T 23-04-2016 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 SUPERFAMILY SSF55620 1 115 6.12E-34 T 23-04-2016 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 Pfam PF02152 Dihydroneopterin aldolase 4 112 1.1E-28 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 113 1.2E-21 T 23-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 Gene3D G3DSA:3.30.1130.10 1 115 8.0E-36 T 23-04-2016 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 SMART SM00905 4 114 3.0E-37 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 PANTHER PTHR20941 1 114 3.9E-18 T 23-04-2016 MSIP34_RS12000 fd63eeac6d38130d2557b386faf4f8d2 116 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 2.3E-25 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 PANTHER PTHR33280 1 80 3.8E-34 T 23-04-2016 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 SUPERFAMILY SSF143800 1 80 5.1E-24 T 23-04-2016 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 23.95 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 Pfam PF01197 Ribosomal protein L31 1 79 7.9E-32 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.0E-21 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 1.1E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.1E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS11685 5aab311c7a74d50eec8592c97b31661f 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 1.1E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 SUPERFAMILY SSF55874 347 461 1.31E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 SUPERFAMILY SSF55785 108 236 1.74E-12 T 23-04-2016 IPR000014 PAS domain MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 PANTHER PTHR24421 144 461 9.4E-45 T 23-04-2016 MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 Gene3D G3DSA:3.30.565.10 307 330 8.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 Gene3D G3DSA:3.30.565.10 368 462 8.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 Pfam PF08447 PAS fold 144 227 3.1E-9 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 Pfam PF07730 Histidine kinase 266 333 3.3E-13 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 462 6.8E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 SMART SM00387 370 464 3.0E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 PANTHER PTHR24421:SF1 144 461 9.4E-45 T 23-04-2016 MSIP34_RS03810 38d16fcb656934aefc7094733e1ff211 465 Gene3D G3DSA:3.30.450.20 109 236 2.6E-17 T 23-04-2016 MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 Pfam PF00460 Flagella basal body rod protein 5 35 2.5E-13 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 3.2E-120 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 PANTHER PTHR30435 1 260 2.9E-135 T 23-04-2016 MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.2E-49 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 243 5.0E-32 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 PANTHER PTHR30435:SF19 1 260 2.9E-135 T 23-04-2016 MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 SUPERFAMILY SSF117143 94 222 1.96E-37 T 23-04-2016 MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 6.1E-26 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain MSIP34_RS03955 bc8ad57e65e24e5fe4c535a5bcdcf9b9 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site MSIP34_RS08940 ddf851656d7105dfadd8c69a5f95a089 495 PANTHER PTHR21588:SF5 66 493 3.2E-28 T 23-04-2016 MSIP34_RS08940 ddf851656d7105dfadd8c69a5f95a089 495 Pfam PF07589 PEP-CTERM motif 469 493 2.3E-4 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS08940 ddf851656d7105dfadd8c69a5f95a089 495 SUPERFAMILY SSF50969 49 243 1.33E-10 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like MSIP34_RS08940 ddf851656d7105dfadd8c69a5f95a089 495 PANTHER PTHR21588 66 493 3.2E-28 T 23-04-2016 MSIP34_RS08940 ddf851656d7105dfadd8c69a5f95a089 495 Gene3D G3DSA:2.130.10.10 406 465 2.7E-16 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 MSIP34_RS08940 ddf851656d7105dfadd8c69a5f95a089 495 Gene3D G3DSA:2.130.10.10 48 297 2.7E-16 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 TIGRFAM TIGR00761 argB: acetylglutamate kinase 28 268 5.0E-76 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 PANTHER PTHR23342 1 292 6.2E-112 T 23-04-2016 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 Hamap MF_00082_B Acetylglutamate kinase [argB]. 25 293 36.962 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 Gene3D G3DSA:3.40.1160.10 26 292 4.6E-105 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 Hamap MF_00082_A Acetylglutamate kinase [argB]. 28 278 28.776 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 Pfam PF00696 Amino acid kinase family 27 270 2.3E-46 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 SUPERFAMILY SSF53633 7 292 1.14E-93 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 PIRSF PIRSF000728 11 293 7.4E-105 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 PRINTS PR00474 Glutamate 5-kinase family signature 243 263 1.2E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 1.2E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS02420 05c55bbcc3107bd4bb6f63ab1e6792b9 294 PRINTS PR00474 Glutamate 5-kinase family signature 193 220 1.2E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 Gene3D G3DSA:2.40.50.100 71 103 1.8E-10 T 23-04-2016 MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 Gene3D G3DSA:2.40.50.100 184 220 1.8E-10 T 23-04-2016 MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 SUPERFAMILY SSF111369 78 294 1.96E-14 T 23-04-2016 MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 PANTHER PTHR30097 1 363 2.1E-52 T 23-04-2016 MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 PANTHER PTHR30097:SF3 1 363 2.1E-52 T 23-04-2016 MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 290 1.8E-34 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS11090 8c90ca0e1a12ebbe338760d269b418da 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 71 362 2.6E-30 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS04555 6eb40eb8cc4766c081cd27bc72c73204 277 SUPERFAMILY SSF53335 5 248 3.94E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04555 6eb40eb8cc4766c081cd27bc72c73204 277 Gene3D G3DSA:3.40.50.150 23 258 9.9E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS04555 6eb40eb8cc4766c081cd27bc72c73204 277 Pfam PF01564 Spermine/spermidine synthase 64 184 3.4E-5 T 23-04-2016 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 PANTHER PTHR30203:SF15 19 458 2.1E-130 T 23-04-2016 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 14 458 3.1E-112 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 PANTHER PTHR30203 19 458 2.1E-130 T 23-04-2016 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 Pfam PF02321 Outer membrane efflux protein 61 248 3.4E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 Pfam PF02321 Outer membrane efflux protein 273 457 2.6E-27 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 SUPERFAMILY SSF56954 5 458 6.28E-103 T 23-04-2016 MSIP34_RS13620 bb70ebed7d586b4859d3155135f99fad 459 Gene3D G3DSA:1.20.1600.10 50 458 1.1E-106 T 23-04-2016 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 Gene3D G3DSA:3.30.2010.10 58 144 7.1E-22 T 23-04-2016 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 PANTHER PTHR22726:SF10 1 343 3.5E-80 T 23-04-2016 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 Pfam PF14559 Tetratricopeptide repeat 347 411 5.0E-8 T 23-04-2016 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 475 30.729 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 Pfam PF01435 Peptidase family M48 65 252 5.0E-34 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 SUPERFAMILY SSF48452 263 449 2.85E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 PANTHER PTHR22726 1 343 3.5E-80 T 23-04-2016 MSIP34_RS01115 ef7f9fdf748e2de4c471bfb8cc3a9bd1 478 Gene3D G3DSA:1.25.40.10 339 436 4.4E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS03315 2a085cdbccb6bbca7233ab98a1432bae 670 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 228 290 6.4E-16 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal MSIP34_RS03315 2a085cdbccb6bbca7233ab98a1432bae 670 Gene3D G3DSA:3.10.350.10 218 274 4.2E-4 T 23-04-2016 IPR018392 LysM domain MSIP34_RS03390 c19827c87ff8c18a02c7817c680277e2 328 PANTHER PTHR39569 2 200 5.9E-47 T 23-04-2016 MSIP34_RS03390 c19827c87ff8c18a02c7817c680277e2 328 SMART SM01118 2 206 2.7E-32 T 23-04-2016 IPR023577 CYTH domain MSIP34_RS03390 c19827c87ff8c18a02c7817c680277e2 328 Gene3D G3DSA:2.40.320.10 4 214 7.7E-33 T 23-04-2016 IPR023577 CYTH domain MSIP34_RS03390 c19827c87ff8c18a02c7817c680277e2 328 PANTHER PTHR39569:SF1 2 200 5.9E-47 T 23-04-2016 MSIP34_RS03390 c19827c87ff8c18a02c7817c680277e2 328 SUPERFAMILY SSF55154 1 216 4.74E-42 T 23-04-2016 IPR033469 CYTH-like domain MSIP34_RS03390 c19827c87ff8c18a02c7817c680277e2 328 Pfam PF01928 CYTH domain 4 200 2.9E-26 T 23-04-2016 IPR023577 CYTH domain MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 PANTHER PTHR10146 4 231 1.1E-93 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 Pfam PF01168 Alanine racemase, N-terminal domain 8 227 8.2E-32 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 SUPERFAMILY SSF51419 1 224 7.72E-80 T 23-04-2016 IPR029066 PLP-binding barrel MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 Gene3D G3DSA:3.20.20.10 2 230 2.8E-89 T 23-04-2016 IPR029066 PLP-binding barrel MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 226 2.6E-74 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 MSIP34_RS03155 8377b1af126bee525aa6e35d65bdfae9 233 PIRSF PIRSF004848 1 231 2.5E-71 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 MSIP34_RS10015 cefdaa6dfe1878ecc5cb32d0b4e7d479 241 SUPERFAMILY SSF53639 4 196 4.51E-31 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS10015 cefdaa6dfe1878ecc5cb32d0b4e7d479 241 Gene3D G3DSA:3.40.225.10 3 212 7.3E-38 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS10015 cefdaa6dfe1878ecc5cb32d0b4e7d479 241 PANTHER PTHR22789 1 196 7.9E-23 T 23-04-2016 MSIP34_RS10015 cefdaa6dfe1878ecc5cb32d0b4e7d479 241 SMART SM01007 3 195 3.5E-24 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS10015 cefdaa6dfe1878ecc5cb32d0b4e7d479 241 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 5 194 4.6E-28 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS03320 c97ef8f58b38e5c62c1d37e1719eff02 194 PANTHER PTHR30466 3 184 4.0E-37 T 23-04-2016 MSIP34_RS03320 c97ef8f58b38e5c62c1d37e1719eff02 194 SMART SM00903 15 167 1.7E-28 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 MSIP34_RS03320 c97ef8f58b38e5c62c1d37e1719eff02 194 Gene3D G3DSA:2.30.110.10 7 187 1.5E-52 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS03320 c97ef8f58b38e5c62c1d37e1719eff02 194 Pfam PF01613 Flavin reductase like domain 19 164 1.2E-20 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 MSIP34_RS03320 c97ef8f58b38e5c62c1d37e1719eff02 194 SUPERFAMILY SSF50475 9 189 5.4E-44 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS03320 c97ef8f58b38e5c62c1d37e1719eff02 194 PANTHER PTHR30466:SF6 3 184 4.0E-37 T 23-04-2016 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.196 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 PANTHER PTHR11758 1 131 1.1E-53 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 Pfam PF00410 Ribosomal protein S8 5 130 1.2E-49 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 Gene3D G3DSA:3.30.1490.10 75 130 1.2E-26 T 23-04-2016 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 Gene3D G3DSA:3.30.1370.30 2 72 2.5E-28 T 23-04-2016 MSIP34_RS01650 220ab6c02f8539f7bbb0824cf5576e56 131 SUPERFAMILY SSF56047 2 130 1.83E-47 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS11900 8019e6e72463712f9e155805d6154e54 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 24 93 1.5E-17 T 23-04-2016 IPR007711 Toxin HigB-1 MSIP34_RS11900 8019e6e72463712f9e155805d6154e54 93 PANTHER PTHR40266:SF2 1 93 1.2E-38 T 23-04-2016 MSIP34_RS11900 8019e6e72463712f9e155805d6154e54 93 SUPERFAMILY SSF143011 20 93 4.32E-13 T 23-04-2016 MSIP34_RS11900 8019e6e72463712f9e155805d6154e54 93 PANTHER PTHR40266 1 93 1.2E-38 T 23-04-2016 MSIP34_RS02150 2548133375f9ce216b2120bc10c64b42 348 Pfam PF16220 Domain of unknown function (DUF4880) 20 55 1.4E-12 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS02150 2548133375f9ce216b2120bc10c64b42 348 Pfam PF04773 FecR protein 121 213 1.9E-18 T 23-04-2016 IPR006860 FecR protein MSIP34_RS02150 2548133375f9ce216b2120bc10c64b42 348 PANTHER PTHR30273 12 332 1.0E-64 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS02150 2548133375f9ce216b2120bc10c64b42 348 PANTHER PTHR30273:SF3 12 332 1.0E-64 T 23-04-2016 MSIP34_RS02150 2548133375f9ce216b2120bc10c64b42 348 PIRSF PIRSF018266 9 328 1.6E-71 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS04670 e480c4777703ce34929e2511a2830d9f 100 PANTHER PTHR33606 1 95 3.9E-30 T 23-04-2016 MSIP34_RS04670 e480c4777703ce34929e2511a2830d9f 100 SUPERFAMILY SSF54909 1 97 2.95E-30 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel MSIP34_RS04670 e480c4777703ce34929e2511a2830d9f 100 Gene3D G3DSA:3.30.70.1060 1 97 1.3E-33 T 23-04-2016 MSIP34_RS04670 e480c4777703ce34929e2511a2830d9f 100 Pfam PF03795 YCII-related domain 1 95 1.1E-25 T 23-04-2016 IPR005545 YCII-related MSIP34_RS14665 0a3623d320cd779575b67d1ac931487c 232 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 44 216 8.3E-40 T 23-04-2016 IPR014263 Methanolan biosynthesis EpsI MSIP34_RS14665 0a3623d320cd779575b67d1ac931487c 232 Pfam PF11984 Protein of unknown function (DUF3485) 15 222 3.4E-47 T 23-04-2016 IPR014263 Methanolan biosynthesis EpsI MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 SUPERFAMILY SSF56770 9 153 1.7E-66 T 23-04-2016 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 1.4E-22 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 PANTHER PTHR11995 11 156 3.9E-122 T 23-04-2016 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 41.69 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 2.2E-77 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 Gene3D G3DSA:3.40.50.700 24 150 5.3E-32 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 MSIP34_RS03435 bdaffb40ee1d580ce9522faed33edb66 158 PANTHER PTHR11995:SF19 11 156 3.9E-122 T 23-04-2016 MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 PANTHER PTHR10799 201 211 2.4E-19 T 23-04-2016 MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 PANTHER PTHR10799 469 594 2.4E-19 T 23-04-2016 MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 592 2.0E-43 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 SUPERFAMILY SSF55073 441 594 6.67E-46 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 PANTHER PTHR10799:SF750 201 211 2.4E-19 T 23-04-2016 MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 PANTHER PTHR10799:SF750 469 594 2.4E-19 T 23-04-2016 MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 Gene3D G3DSA:3.30.70.270 439 595 3.8E-51 T 23-04-2016 MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 434 594 1.2E-46 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS13885 781dd5b854a3b8976d1968800dae41b6 622 SMART SM00267 425 596 1.1E-55 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 Gene3D G3DSA:3.40.1190.10 11 288 4.6E-87 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 SUPERFAMILY SSF53244 291 423 2.56E-27 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 Pfam PF08245 Mur ligase middle domain 51 264 5.6E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 Gene3D G3DSA:3.90.190.20 291 423 2.0E-39 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 423 3.0E-99 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 PANTHER PTHR11136 10 423 2.6E-119 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 PIRSF PIRSF001563 6 428 1.3E-107 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 PANTHER PTHR11136:SF0 10 423 2.6E-119 T 23-04-2016 MSIP34_RS07850 6c100b197288c2ba25160c0a17b124db 430 SUPERFAMILY SSF53623 10 287 9.73E-86 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 MSIP34_RS09105 1acc1b1ded5e4646e6771f1d1a1fd5f0 420 Pfam PF06804 NlpB/DapX lipoprotein 34 415 1.1E-42 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein MSIP34_RS00480 78e082f576d4b508f5a90d0f7671a146 217 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS00480 78e082f576d4b508f5a90d0f7671a146 217 SUPERFAMILY SSF54523 11 116 1.73E-8 T 23-04-2016 MSIP34_RS00480 78e082f576d4b508f5a90d0f7671a146 217 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 29 1.3E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 SUPERFAMILY SSF161098 26 277 1.23E-56 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 27 286 8.9E-127 T 23-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 Gene3D G3DSA:1.10.3720.10 29 285 6.3E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 PANTHER PTHR30406:SF1 12 292 3.0E-163 T 23-04-2016 MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 PANTHER PTHR30406 12 292 3.0E-163 T 23-04-2016 MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 281 9.2E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS10850 63a9d0e8fd5f05943aa7236c964155f9 298 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 20 283 4.2E-98 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 MSIP34_RS04705 7066de013d87257405fd31fcb732ec09 260 Pfam PF02616 Segregation and condensation protein ScpA 47 256 1.4E-27 T 23-04-2016 IPR003768 Segregation and condensation protein A MSIP34_RS04705 7066de013d87257405fd31fcb732ec09 260 PANTHER PTHR33969 14 260 4.9E-76 T 23-04-2016 MSIP34_RS04705 7066de013d87257405fd31fcb732ec09 260 Hamap MF_01805 Segregation and condensation protein A [scpA]. 30 259 21.418 T 23-04-2016 IPR003768 Segregation and condensation protein A MSIP34_RS04705 7066de013d87257405fd31fcb732ec09 260 PANTHER PTHR33969:SF2 14 260 4.9E-76 T 23-04-2016 MSIP34_RS11895 f85dc1bf09356b304e6a52e58c7cf5d2 101 PANTHER PTHR36924 2 99 1.2E-39 T 23-04-2016 MSIP34_RS11895 f85dc1bf09356b304e6a52e58c7cf5d2 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 83 2.1E-31 T 23-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 MSIP34_RS11895 f85dc1bf09356b304e6a52e58c7cf5d2 101 Gene3D G3DSA:1.10.260.40 2 94 6.3E-31 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS11895 f85dc1bf09356b304e6a52e58c7cf5d2 101 PANTHER PTHR36924:SF1 2 99 1.2E-39 T 23-04-2016 MSIP34_RS11895 f85dc1bf09356b304e6a52e58c7cf5d2 101 SUPERFAMILY SSF47413 10 94 2.68E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 1.5E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 1.5E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 SUPERFAMILY SSF46689 8 76 7.17E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 Pfam PF02954 Bacterial regulatory protein, Fis family 37 72 1.0E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 PANTHER PTHR32071 10 77 5.7E-16 T 23-04-2016 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 Gene3D G3DSA:1.10.10.60 8 77 5.1E-24 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS01960 8977b68747aa52d063039194f9b6715d 77 PIRSF PIRSF002097 1 77 9.2E-31 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 MSIP34_RS04765 34abfafe79bc74c4b37896c1a6599d34 261 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 232 255 5.4E-6 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS04765 34abfafe79bc74c4b37896c1a6599d34 261 Pfam PF07589 PEP-CTERM motif 231 255 2.7E-7 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS00855 af5df69682f5cbfa1fa2f1e9a66c4987 187 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 98 8.1E-12 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 MSIP34_RS00855 af5df69682f5cbfa1fa2f1e9a66c4987 187 Gene3D G3DSA:2.30.110.10 3 123 1.4E-18 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS00855 af5df69682f5cbfa1fa2f1e9a66c4987 187 PANTHER PTHR39336:SF2 3 176 1.3E-57 T 23-04-2016 MSIP34_RS00855 af5df69682f5cbfa1fa2f1e9a66c4987 187 PANTHER PTHR39336 3 176 1.3E-57 T 23-04-2016 MSIP34_RS00855 af5df69682f5cbfa1fa2f1e9a66c4987 187 SUPERFAMILY SSF50475 8 112 4.49E-15 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 MSIP34_RS12860 2ccc7e411d366ba3b5d83377cac61bb4 214 Gene3D G3DSA:1.10.760.10 28 185 2.5E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS12860 2ccc7e411d366ba3b5d83377cac61bb4 214 SUPERFAMILY SSF46626 90 185 3.78E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS12860 2ccc7e411d366ba3b5d83377cac61bb4 214 SUPERFAMILY SSF46626 6 63 3.78E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS12860 2ccc7e411d366ba3b5d83377cac61bb4 214 PANTHER PTHR10422:SF23 38 158 1.4E-20 T 23-04-2016 MSIP34_RS12860 2ccc7e411d366ba3b5d83377cac61bb4 214 PANTHER PTHR10422 38 158 1.4E-20 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 MSIP34_RS12860 2ccc7e411d366ba3b5d83377cac61bb4 214 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 148 3.4E-32 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO MSIP34_RS05715 9d989d2769bf88763875c3c68be08605 104 PANTHER PTHR30561 1 104 7.5E-45 T 23-04-2016 MSIP34_RS05715 9d989d2769bf88763875c3c68be08605 104 SUPERFAMILY SSF103481 5 101 1.96E-18 T 23-04-2016 MSIP34_RS05715 9d989d2769bf88763875c3c68be08605 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.7E-29 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 MSIP34_RS05715 9d989d2769bf88763875c3c68be08605 104 PANTHER PTHR30561:SF0 1 104 7.5E-45 T 23-04-2016 MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 Gene3D G3DSA:2.60.300.12 2 96 3.3E-36 T 23-04-2016 IPR000361 FeS cluster biogenesis MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 SUPERFAMILY SSF89360 1 96 8.11E-34 T 23-04-2016 IPR000361 FeS cluster biogenesis MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 1.3E-37 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 PANTHER PTHR10072:SF48 1 107 3.5E-54 T 23-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 1.2E-26 T 23-04-2016 IPR000361 FeS cluster biogenesis MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 6.0E-58 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 MSIP34_RS09360 1590b2ad1a91f6e1cb3cbb69bead919f 107 PANTHER PTHR10072 1 107 3.5E-54 T 23-04-2016 MSIP34_RS05910 bd43742d6bf122d223082b471014d84e 155 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 112 1.0E-38 T 23-04-2016 IPR020378 Protein of unknown function DUF4186 MSIP34_RS05910 bd43742d6bf122d223082b471014d84e 155 Pfam PF13811 Domain of unknown function (DUF4186) 6 113 1.5E-46 T 23-04-2016 IPR020378 Protein of unknown function DUF4186 MSIP34_RS06395 6c054a89e1a1b9971f19ec328635b7b0 167 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 95 148 9.4E-13 T 23-04-2016 IPR018637 Domain of unknown function DUF2059 MSIP34_RS00130 86806b6250a42302725bfe7722a8d8e3 184 Pfam PF00578 AhpC/TSA family 49 158 1.4E-20 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS00130 86806b6250a42302725bfe7722a8d8e3 184 SUPERFAMILY SSF52833 4 178 1.15E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS00130 86806b6250a42302725bfe7722a8d8e3 184 PANTHER PTHR10681:SF125 48 165 5.2E-26 T 23-04-2016 MSIP34_RS00130 86806b6250a42302725bfe7722a8d8e3 184 Gene3D G3DSA:3.40.30.10 7 180 1.9E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS00130 86806b6250a42302725bfe7722a8d8e3 184 PANTHER PTHR10681 48 165 5.2E-26 T 23-04-2016 MSIP34_RS00130 86806b6250a42302725bfe7722a8d8e3 184 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 MSIP34_RS10925 bfb7bab2932006c56bf52944f66f3f99 120 SUPERFAMILY SSF81301 4 109 5.72E-38 T 23-04-2016 MSIP34_RS10925 bfb7bab2932006c56bf52944f66f3f99 120 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 10 105 1.3E-36 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS MSIP34_RS10925 bfb7bab2932006c56bf52944f66f3f99 120 PANTHER PTHR21043 10 106 1.3E-38 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS MSIP34_RS10925 bfb7bab2932006c56bf52944f66f3f99 120 Gene3D G3DSA:3.30.460.10 7 107 7.8E-38 T 23-04-2016 MSIP34_RS10925 bfb7bab2932006c56bf52944f66f3f99 120 Pfam PF02410 Ribosomal silencing factor during starvation 11 105 1.2E-28 T 23-04-2016 MSIP34_RS10925 bfb7bab2932006c56bf52944f66f3f99 120 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 106 24.615 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS MSIP34_RS13105 b4d875a67cb054963bd487f8a825f484 896 Pfam PF05170 AsmA family 1 517 9.8E-33 T 23-04-2016 IPR007844 AsmA MSIP34_RS13105 b4d875a67cb054963bd487f8a825f484 896 PANTHER PTHR30441 567 887 1.8E-81 T 23-04-2016 MSIP34_RS13105 b4d875a67cb054963bd487f8a825f484 896 PANTHER PTHR30441 1 502 1.8E-81 T 23-04-2016 MSIP34_RS13105 b4d875a67cb054963bd487f8a825f484 896 Pfam PF13502 AsmA-like C-terminal region 593 810 3.8E-27 T 23-04-2016 IPR032712 AsmA-like, C-terminal MSIP34_RS13105 b4d875a67cb054963bd487f8a825f484 896 PANTHER PTHR30441:SF4 567 887 1.8E-81 T 23-04-2016 MSIP34_RS13105 b4d875a67cb054963bd487f8a825f484 896 PANTHER PTHR30441:SF4 1 502 1.8E-81 T 23-04-2016 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 23-04-2016 IPR019844 Cold-shock conserved site MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 PRINTS PR00050 Cold shock protein signature 4 19 2.2E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 PRINTS PR00050 Cold shock protein signature 25 34 2.2E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 PRINTS PR00050 Cold shock protein signature 40 58 2.2E-18 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 SMART SM00357 3 67 9.7E-31 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 PANTHER PTHR11544 1 67 2.8E-38 T 23-04-2016 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 PIRSF PIRSF002599 1 67 9.3E-25 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 SUPERFAMILY SSF50249 1 65 5.14E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.9E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 MSIP34_RS02990 188522b6c3ded10396bda811fe80ca9f 67 Gene3D G3DSA:2.40.50.140 1 65 9.1E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS09080 409f242a9fe28872388ffe8332d43b68 146 Pfam PF08897 Domain of unknown function (DUF1841) 7 140 4.0E-60 T 23-04-2016 IPR014993 Protein of unknown function DUF1841 MSIP34_RS10105 47db184c4a21ba0dc606fa6c5b761c3d 501 Pfam PF00474 Sodium:solute symporter family 30 426 7.3E-37 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 MSIP34_RS10105 47db184c4a21ba0dc606fa6c5b761c3d 501 PANTHER PTHR11819:SF141 1 463 1.4E-91 T 23-04-2016 MSIP34_RS10105 47db184c4a21ba0dc606fa6c5b761c3d 501 PANTHER PTHR11819 1 463 1.4E-91 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 PANTHER PTHR30093 1 62 2.2E-13 T 23-04-2016 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 Pfam PF13633 Prokaryotic N-terminal methylation site 5 30 1.6E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 SUPERFAMILY SSF54523 7 122 3.98E-17 T 23-04-2016 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 3.5E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 2.7E-8 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 2.7E-8 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 PANTHER PTHR30093:SF3 1 62 2.2E-13 T 23-04-2016 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 Gene3D G3DSA:3.30.700.10 7 77 6.7E-9 T 23-04-2016 MSIP34_RS05275 b5d6209b3a82364d4dc84d3d8ab9ac44 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS11135 a226abd0c7b54506831af8efe06be09d 206 SUPERFAMILY SSF46689 12 88 4.34E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS11135 a226abd0c7b54506831af8efe06be09d 206 PANTHER PTHR30055 8 188 8.4E-20 T 23-04-2016 MSIP34_RS11135 a226abd0c7b54506831af8efe06be09d 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 72 1.2E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS11135 a226abd0c7b54506831af8efe06be09d 206 Gene3D G3DSA:1.10.357.10 8 197 5.7E-25 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS11135 a226abd0c7b54506831af8efe06be09d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 47 70 6.5E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS11135 a226abd0c7b54506831af8efe06be09d 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 39 6.5E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 PANTHER PTHR24220 7 263 1.1E-137 T 23-04-2016 MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 PANTHER PTHR24220:SF368 7 263 1.1E-137 T 23-04-2016 MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 SMART SM00382 30 203 1.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 Pfam PF00005 ABC transporter 22 169 1.9E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 SUPERFAMILY SSF52540 5 233 3.84E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01330 fa0f0c0bb4c0221f5c715abd0946581b 268 Gene3D G3DSA:3.40.50.300 2 232 4.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 Pfam PF02814 UreE urease accessory protein, N-terminal domain 11 64 7.8E-19 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 SMART SM00988 1 64 4.3E-21 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 Gene3D G3DSA:3.30.70.790 72 142 6.5E-33 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 Gene3D G3DSA:2.60.260.20 1 70 9.1E-24 T 23-04-2016 MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 PIRSF PIRSF036402 2 150 1.9E-49 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 SUPERFAMILY SSF69737 71 137 1.96E-21 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 Hamap MF_00822 Urease accessory protein UreE [ureE]. 3 138 25.993 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 Pfam PF05194 UreE urease accessory protein, C-terminal domain 71 147 1.1E-29 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 MSIP34_RS03615 65ac48dd131d826de0adc8e4b99a4cfb 165 SUPERFAMILY SSF69287 1 69 3.53E-18 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal MSIP34_RS07670 045b05eeca37864540fe8ff701db8819 432 Gene3D G3DSA:3.40.50.1220 74 163 1.1E-5 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain MSIP34_RS07670 045b05eeca37864540fe8ff701db8819 432 PIRSF PIRSF005646 14 430 8.1E-49 T 23-04-2016 IPR016457 Formylmethanofuran dehydrogenase, subunit B GO:0015948|GO:0018493 KEGG: 00680+1.2.99.5|MetaCyc: PWY-5209|UniPathway: UPA00640 MSIP34_RS07670 045b05eeca37864540fe8ff701db8819 432 SUPERFAMILY SSF53706 214 359 4.87E-5 T 23-04-2016 MSIP34_RS07670 045b05eeca37864540fe8ff701db8819 432 SUPERFAMILY SSF53706 20 169 4.87E-5 T 23-04-2016 MSIP34_RS07245 602f1fed14475d0902520ed720839048 209 Pfam PF09997 Predicted membrane protein (DUF2238) 39 179 2.7E-54 T 23-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 MSIP34_RS07245 602f1fed14475d0902520ed720839048 209 PIRSF PIRSF020606 1 201 1.2E-74 T 23-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 MSIP34_RS05460 9ec83db87342c512f1f939d201043aca 279 SUPERFAMILY SSF143631 9 264 3.31E-47 T 23-04-2016 IPR003374 ApbE-like domain MSIP34_RS05460 9ec83db87342c512f1f939d201043aca 279 PANTHER PTHR30040 10 262 1.0E-30 T 23-04-2016 MSIP34_RS05460 9ec83db87342c512f1f939d201043aca 279 Pfam PF02424 ApbE family 16 262 1.7E-35 T 23-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 Gene3D G3DSA:1.25.40.10 204 372 2.1E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 PANTHER PTHR23083 197 360 2.4E-18 T 23-04-2016 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 SUPERFAMILY SSF48452 200 358 3.04E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 Pfam PF14559 Tetratricopeptide repeat 205 268 2.9E-9 T 23-04-2016 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 SMART SM00028 228 261 0.0043 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 SMART SM00028 329 362 0.5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00445 138c9b6c0438fae1409a796bae4d8a10 381 SMART SM00028 295 328 0.7 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 692 48.77 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 PANTHER PTHR32331 2 722 0.0 T 23-04-2016 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 Pfam PF11842 Domain of unknown function (DUF3362) 595 692 1.6E-47 T 23-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 PANTHER PTHR32331:SF3 2 722 0.0 T 23-04-2016 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 Gene3D G3DSA:3.80.30.20 375 615 1.8E-50 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 Pfam PF08497 Radical SAM N-terminal 24 380 3.1E-145 T 23-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 SUPERFAMILY SSF102114 364 441 5.23E-14 T 23-04-2016 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 SUPERFAMILY SSF102114 471 615 5.23E-14 T 23-04-2016 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 SMART SM00729 377 630 2.1E-12 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 Pfam PF04055 Radical SAM superfamily 381 586 7.9E-19 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 645 2.6E-263 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 MSIP34_RS05700 d702db98f0a23a7878ced84176c7cbbd 724 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 381 401 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 MSIP34_RS09795 8b3346e94ca26456f6379845b63aa055 367 SUPERFAMILY SSF56935 78 367 1.91E-12 T 23-04-2016 MSIP34_RS09795 8b3346e94ca26456f6379845b63aa055 367 Pfam PF07396 Phosphate-selective porin O and P 42 197 4.1E-8 T 23-04-2016 IPR010870 Phosphate-selective porin O/P MSIP34_RS09795 8b3346e94ca26456f6379845b63aa055 367 Gene3D G3DSA:2.40.160.10 44 273 1.5E-17 T 23-04-2016 IPR023614 Porin domain MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 SUPERFAMILY SSF53300 317 452 1.17E-6 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 SUPERFAMILY SSF50998 778 1172 2.35E-10 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 Pfam PF05567 Neisseria PilC beta-propeller domain 763 1073 1.5E-52 T 23-04-2016 IPR008707 PilC beta-propeller domain MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 SMART SM00564 933 964 52.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 SMART SM00564 796 827 0.11 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 Gene3D G3DSA:2.140.10.10 761 959 4.6E-8 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS13015 81444214471f22c7f54b94828152117a 1229 Gene3D G3DSA:2.140.10.10 1004 1156 4.6E-8 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS08005 6f803bf74ff6794bdec1c7743ee22ae3 169 Pfam PF04982 HPP family 51 166 1.4E-37 T 23-04-2016 IPR007065 HPP MSIP34_RS08005 6f803bf74ff6794bdec1c7743ee22ae3 169 PANTHER PTHR33741 14 169 3.4E-35 T 23-04-2016 MSIP34_RS10655 6d41b4adf0c6f6e151bb6a7f9b5e37fd 280 PANTHER PTHR24220 15 226 5.1E-44 T 23-04-2016 MSIP34_RS10655 6d41b4adf0c6f6e151bb6a7f9b5e37fd 280 PANTHER PTHR24220:SF558 15 226 5.1E-44 T 23-04-2016 MSIP34_RS10655 6d41b4adf0c6f6e151bb6a7f9b5e37fd 280 SUPERFAMILY SSF52540 25 227 1.09E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10655 6d41b4adf0c6f6e151bb6a7f9b5e37fd 280 Gene3D G3DSA:3.40.50.300 32 230 7.6E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10655 6d41b4adf0c6f6e151bb6a7f9b5e37fd 280 Pfam PF00005 ABC transporter 32 175 1.9E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS10655 6d41b4adf0c6f6e151bb6a7f9b5e37fd 280 SMART SM00382 37 225 1.6E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS06625 879aa69cf92ac5ca9d2de48c8e1e3348 268 PANTHER PTHR33973 17 265 4.2E-78 T 23-04-2016 MSIP34_RS06625 879aa69cf92ac5ca9d2de48c8e1e3348 268 Pfam PF07103 Protein of unknown function (DUF1365) 20 262 6.0E-77 T 23-04-2016 IPR010775 Protein of unknown function DUF1365 MSIP34_RS01660 c55c8be2916cdd882243c4e137abf2cb 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 117 5.1E-37 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01660 c55c8be2916cdd882243c4e137abf2cb 117 Gene3D G3DSA:3.30.420.100 23 117 5.3E-37 T 23-04-2016 MSIP34_RS01660 c55c8be2916cdd882243c4e137abf2cb 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.983 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01660 c55c8be2916cdd882243c4e137abf2cb 117 PANTHER PTHR12899 6 117 5.5E-40 T 23-04-2016 MSIP34_RS01660 c55c8be2916cdd882243c4e137abf2cb 117 SUPERFAMILY SSF53137 6 115 1.09E-51 T 23-04-2016 MSIP34_RS01660 c55c8be2916cdd882243c4e137abf2cb 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 117 9.3E-39 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01265 f3743cd598b27ac40252ae75ae1ec787 127 Pfam PF01597 Glycine cleavage H-protein 7 125 1.5E-35 T 23-04-2016 IPR002930 Glycine cleavage system H-protein MSIP34_RS01265 f3743cd598b27ac40252ae75ae1ec787 127 PANTHER PTHR11715 1 123 4.8E-46 T 23-04-2016 IPR002930 Glycine cleavage system H-protein MSIP34_RS01265 f3743cd598b27ac40252ae75ae1ec787 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 126 25.363 T 23-04-2016 IPR002930 Glycine cleavage system H-protein MSIP34_RS01265 f3743cd598b27ac40252ae75ae1ec787 127 SUPERFAMILY SSF51230 4 125 4.32E-34 T 23-04-2016 IPR011053 Single hybrid motif MSIP34_RS01265 f3743cd598b27ac40252ae75ae1ec787 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 125 2.2E-37 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 MSIP34_RS01265 f3743cd598b27ac40252ae75ae1ec787 127 Gene3D G3DSA:2.40.50.100 6 125 2.3E-38 T 23-04-2016 MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 PANTHER PTHR10625 1 305 1.5E-100 T 23-04-2016 IPR000286 Histone deacetylase superfamily MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 Gene3D G3DSA:3.40.800.20 3 305 4.4E-104 T 23-04-2016 IPR023801 Histone deacetylase domain MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 Pfam PF00850 Histone deacetylase domain 20 303 3.0E-82 T 23-04-2016 IPR023801 Histone deacetylase domain MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 1.1E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 1.1E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 1.1E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily MSIP34_RS07330 35ff1ab9b364ba275b53436e3be837c5 305 SUPERFAMILY SSF52768 1 305 3.98E-101 T 23-04-2016 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 62 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 SUPERFAMILY SSF46689 8 77 2.33E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 5.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 5.4E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 Gene3D G3DSA:1.10.357.10 78 201 2.8E-37 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 PANTHER PTHR30055:SF34 3 201 4.5E-72 T 23-04-2016 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 Gene3D G3DSA:1.10.10.60 9 71 7.1E-23 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 PANTHER PTHR30055 3 201 4.5E-72 T 23-04-2016 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 1.4E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS05685 7c2c5a6d5f145e6e2f8941f884f2e8e5 202 SUPERFAMILY SSF48498 90 199 3.26E-25 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS06275 256a3e7cb617f04a8b47e966788d56c7 859 Gene3D G3DSA:3.30.450.20 115 209 2.2E-6 T 23-04-2016 MSIP34_RS06275 256a3e7cb617f04a8b47e966788d56c7 859 Pfam PF01584 CheW-like domain 702 839 7.1E-20 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS06275 256a3e7cb617f04a8b47e966788d56c7 859 SUPERFAMILY SSF50341 701 842 1.7E-18 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS06275 256a3e7cb617f04a8b47e966788d56c7 859 Gene3D G3DSA:2.40.50.180 740 787 8.1E-6 T 23-04-2016 MSIP34_RS06275 256a3e7cb617f04a8b47e966788d56c7 859 SMART SM00260 697 840 4.5E-7 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 MSIP34_RS06275 256a3e7cb617f04a8b47e966788d56c7 859 PANTHER PTHR22617 700 856 3.0E-18 T 23-04-2016 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PANTHER PTHR30332 164 572 7.2E-95 T 23-04-2016 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PANTHER PTHR30332:SF7 164 572 7.2E-95 T 23-04-2016 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 Pfam PF00263 Bacterial type II and III secretion system protein 392 553 1.5E-45 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PRINTS PR00811 Bacterial general secretion pathway protein D signature 541 555 3.0E-12 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PRINTS PR00811 Bacterial general secretion pathway protein D signature 386 410 3.0E-12 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PRINTS PR00811 Bacterial general secretion pathway protein D signature 518 536 3.0E-12 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PRINTS PR00811 Bacterial general secretion pathway protein D signature 421 431 3.0E-12 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 PRINTS PR00811 Bacterial general secretion pathway protein D signature 312 322 3.0E-12 T 23-04-2016 IPR001775 GspD/PilQ family MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 Gene3D G3DSA:1.25.40.10 55 145 1.0E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 Gene3D G3DSA:1.25.40.10 195 216 1.0E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 Pfam PF03958 Bacterial type II/III secretion system short domain 253 308 1.6E-9 T 23-04-2016 IPR005644 NolW-like MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 SUPERFAMILY SSF48452 201 215 3.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS05270 857968a5d97c82387923bd6fa3a1c2fd 655 SUPERFAMILY SSF48452 62 151 3.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00930 6abfe0a476e285b2cfa695047863b629 287 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 271 5.6E-35 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 MSIP34_RS00930 6abfe0a476e285b2cfa695047863b629 287 PIRSF PIRSF026649 1 281 7.5E-71 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 MSIP34_RS00930 6abfe0a476e285b2cfa695047863b629 287 PANTHER PTHR30606 1 271 1.0E-46 T 23-04-2016 MSIP34_RS11740 49e59638671834aa2c83e2a1d8ac8935 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 5.2E-8 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain MSIP34_RS11740 49e59638671834aa2c83e2a1d8ac8935 127 Gene3D G3DSA:3.10.180.10 5 122 2.8E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS11740 49e59638671834aa2c83e2a1d8ac8935 127 SUPERFAMILY SSF54593 3 125 3.3E-20 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS06990 b42b061164653e3875c27364c8f33b6f 329 PANTHER PTHR30388:SF4 5 311 6.1E-83 T 23-04-2016 MSIP34_RS06990 b42b061164653e3875c27364c8f33b6f 329 PANTHER PTHR30388 5 311 6.1E-83 T 23-04-2016 MSIP34_RS06990 b42b061164653e3875c27364c8f33b6f 329 Gene3D G3DSA:3.40.50.720 164 245 3.6E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06990 b42b061164653e3875c27364c8f33b6f 329 SUPERFAMILY SSF51735 165 262 2.89E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS06990 b42b061164653e3875c27364c8f33b6f 329 Pfam PF02625 XdhC and CoxI family 15 83 2.8E-22 T 23-04-2016 IPR003777 XdhC- CoxI MSIP34_RS06990 b42b061164653e3875c27364c8f33b6f 329 Pfam PF13478 XdhC Rossmann domain 165 305 3.9E-38 T 23-04-2016 IPR027051 XdhC Rossmann domain MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 3 88 22.796 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 Gene3D G3DSA:3.30.70.1460 3 88 4.9E-33 T 23-04-2016 IPR027471 YbeD-like domain MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 PANTHER PTHR38036 1 88 2.5E-25 T 23-04-2016 MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 Pfam PF04359 Protein of unknown function (DUF493) 6 88 1.5E-33 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 SUPERFAMILY SSF117991 4 88 3.79E-28 T 23-04-2016 IPR027471 YbeD-like domain MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 ProDom PD061650 JHP0447 HP0495 CJ0253 9 88 1.0E-5 T 23-04-2016 MSIP34_RS12780 dd7a600b44fafe1bbdb0a8e640fce19c 88 PANTHER PTHR38036:SF1 1 88 2.5E-25 T 23-04-2016 MSIP34_RS04065 bd7e2a8cdb4bff49b6dff8285c968930 333 PANTHER PTHR30273 11 333 1.2E-92 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS04065 bd7e2a8cdb4bff49b6dff8285c968930 333 Pfam PF04773 FecR protein 127 219 5.8E-23 T 23-04-2016 IPR006860 FecR protein MSIP34_RS04065 bd7e2a8cdb4bff49b6dff8285c968930 333 Pfam PF16220 Domain of unknown function (DUF4880) 20 60 8.1E-12 T 23-04-2016 IPR032623 FecR, N-terminal MSIP34_RS04065 bd7e2a8cdb4bff49b6dff8285c968930 333 PANTHER PTHR30273:SF3 11 333 1.2E-92 T 23-04-2016 MSIP34_RS04065 bd7e2a8cdb4bff49b6dff8285c968930 333 PIRSF PIRSF018266 9 332 1.4E-95 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component MSIP34_RS04960 25ed469157a3089f72c8d162fb947184 325 PANTHER PTHR34351:SF1 14 322 4.2E-52 T 23-04-2016 MSIP34_RS04960 25ed469157a3089f72c8d162fb947184 325 Pfam PF01882 Protein of unknown function DUF58 219 295 1.4E-15 T 23-04-2016 IPR002881 Domain of unknown function DUF58 MSIP34_RS04960 25ed469157a3089f72c8d162fb947184 325 PANTHER PTHR34351 14 322 4.2E-52 T 23-04-2016 MSIP34_RS07620 171a8407461251490935d3b3f7c3d787 178 SUPERFAMILY SSF54211 6 175 1.14E-56 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07620 171a8407461251490935d3b3f7c3d787 178 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 8 175 1.6E-62 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS07620 171a8407461251490935d3b3f7c3d787 178 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 9 175 2.0E-66 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS07620 171a8407461251490935d3b3f7c3d787 178 Gene3D G3DSA:3.30.230.60 5 176 3.4E-72 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 SUPERFAMILY SSF89447 1 134 1.99E-42 T 23-04-2016 MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 PANTHER PTHR34701 2 146 1.6E-46 T 23-04-2016 MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 Pfam PF02381 MraZ protein, putative antitoxin-like 80 134 1.6E-14 T 23-04-2016 IPR020603 MraZ domain MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 Pfam PF02381 MraZ protein, putative antitoxin-like 1 74 3.4E-16 T 23-04-2016 IPR020603 MraZ domain MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 137 9.0E-64 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 136 5.9E-40 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 MSIP34_RS02300 68531e7fbea2a31299a375185c4aed58 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 52.262 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PANTHER PTHR24322 155 186 3.0E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PANTHER PTHR24322 11 139 3.0E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 SUPERFAMILY SSF51735 5 247 2.08E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 Gene3D G3DSA:3.40.50.720 9 219 1.8E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PIRSF PIRSF000126 1 265 1.6E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 Pfam PF00106 short chain dehydrogenase 9 194 7.9E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.104705E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.104705E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.104705E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.104705E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.104705E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.124771E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.124771E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.124771E-9 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PANTHER PTHR24322:SF468 155 186 3.0E-42 T 23-04-2016 MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 PANTHER PTHR24322:SF468 11 139 3.0E-42 T 23-04-2016 MSIP34_RS13660 9f9e6901548abd21e86a6cbbaf30d3e4 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 MSIP34_RS03910 ce5523aed90048073c86770a3708f627 137 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 36 103 1.4E-20 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 MSIP34_RS03910 ce5523aed90048073c86770a3708f627 137 Pfam PF04347 Flagellar biosynthesis protein, FliO 48 129 7.5E-20 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 MSIP34_RS01745 d02b9bce45e44317e88f062a7a12fea0 150 Pfam PF00692 dUTPase 18 148 4.8E-37 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 MSIP34_RS01745 d02b9bce45e44317e88f062a7a12fea0 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 15 149 3.1E-47 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 MSIP34_RS01745 d02b9bce45e44317e88f062a7a12fea0 150 PANTHER PTHR11241 1 149 3.6E-49 T 23-04-2016 MSIP34_RS01745 d02b9bce45e44317e88f062a7a12fea0 150 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 149 32.888 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 MSIP34_RS01745 d02b9bce45e44317e88f062a7a12fea0 150 Gene3D G3DSA:2.70.40.10 7 149 8.5E-52 T 23-04-2016 IPR029054 dUTPase-like MSIP34_RS01745 d02b9bce45e44317e88f062a7a12fea0 150 SUPERFAMILY SSF51283 9 149 8.9E-52 T 23-04-2016 IPR029054 dUTPase-like MSIP34_RS01685 d740cd29309ba454f6ca4d5f53abbf80 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 2.7E-36 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 MSIP34_RS01685 d740cd29309ba454f6ca4d5f53abbf80 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.4E-26 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 MSIP34_RS01685 d740cd29309ba454f6ca4d5f53abbf80 72 Gene3D G3DSA:2.40.50.140 1 72 1.2E-37 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01685 d740cd29309ba454f6ca4d5f53abbf80 72 PANTHER PTHR33370 1 72 2.5E-47 T 23-04-2016 MSIP34_RS01685 d740cd29309ba454f6ca4d5f53abbf80 72 SUPERFAMILY SSF50249 1 70 6.28E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01685 d740cd29309ba454f6ca4d5f53abbf80 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.868 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 MSIP34_RS10385 7381bb2ae040173b2af0c0df041b031f 116 Pfam PF13143 Protein of unknown function (DUF3986) 58 97 2.2E-4 T 23-04-2016 IPR025047 Protein of unknown function DUF3986 MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 Gene3D G3DSA:3.40.50.150 66 341 1.0E-78 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 PANTHER PTHR10108 267 347 9.8E-132 T 23-04-2016 MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 PANTHER PTHR10108 1 251 9.8E-132 T 23-04-2016 MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 Pfam PF02353 Mycolic acid cyclopropane synthetase 69 330 7.6E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 SUPERFAMILY SSF53335 70 338 8.13E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 PANTHER PTHR10108:SF915 267 347 9.8E-132 T 23-04-2016 MSIP34_RS06660 0cd0527dc47259c1c7aeff67a18ce871 348 PANTHER PTHR10108:SF915 1 251 9.8E-132 T 23-04-2016 MSIP34_RS00295 63a37aaa3c7d3c16ed6792a0a379dc70 130 SUPERFAMILY SSF54211 5 130 1.06E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS00295 63a37aaa3c7d3c16ed6792a0a379dc70 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 7.6E-46 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00295 63a37aaa3c7d3c16ed6792a0a379dc70 130 PANTHER PTHR21569 7 130 8.1E-63 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 MSIP34_RS00295 63a37aaa3c7d3c16ed6792a0a379dc70 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.239 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid MSIP34_RS00295 63a37aaa3c7d3c16ed6792a0a379dc70 130 Gene3D G3DSA:3.30.230.10 5 130 2.8E-49 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup MSIP34_RS00295 63a37aaa3c7d3c16ed6792a0a379dc70 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 PANTHER PTHR11645 2 270 7.7E-97 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 PANTHER PTHR11645:SF0 2 270 7.7E-97 T 23-04-2016 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 263 26.188 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 SUPERFAMILY SSF51735 3 156 1.26E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 3.1E-33 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 Gene3D G3DSA:1.10.3730.10 159 263 1.6E-33 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 263 4.8E-78 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 219 241 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 95 6.0E-19 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 PIRSF PIRSF000193 1 266 9.3E-75 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 SUPERFAMILY SSF48179 159 266 3.06E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 MSIP34_RS03150 dd57048a321824398c8a6100ad32a3a1 270 Gene3D G3DSA:3.40.50.720 2 156 4.4E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13080 5b7bbc18945d16577ac2fb988b75d460 147 SUPERFAMILY SSF55729 16 147 5.65E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS13080 5b7bbc18945d16577ac2fb988b75d460 147 Pfam PF13673 Acetyltransferase (GNAT) domain 30 146 4.2E-24 T 23-04-2016 IPR000182 GNAT domain GO:0008080 MSIP34_RS13080 5b7bbc18945d16577ac2fb988b75d460 147 Gene3D G3DSA:3.40.630.30 23 145 5.4E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase MSIP34_RS13080 5b7bbc18945d16577ac2fb988b75d460 147 PANTHER PTHR13355 10 147 2.8E-29 T 23-04-2016 MSIP34_RS13080 5b7bbc18945d16577ac2fb988b75d460 147 PANTHER PTHR13355:SF8 10 147 2.8E-29 T 23-04-2016 MSIP34_RS13280 7650279fada9a4ab1ade90aadcb75ab2 293 PANTHER PTHR12715 5 283 1.2E-66 T 23-04-2016 MSIP34_RS13280 7650279fada9a4ab1ade90aadcb75ab2 293 SUPERFAMILY SSF103481 37 139 4.71E-11 T 23-04-2016 MSIP34_RS13280 7650279fada9a4ab1ade90aadcb75ab2 293 Pfam PF00892 EamA-like transporter family 151 283 2.4E-19 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS13280 7650279fada9a4ab1ade90aadcb75ab2 293 Pfam PF00892 EamA-like transporter family 4 136 4.2E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS13280 7650279fada9a4ab1ade90aadcb75ab2 293 SUPERFAMILY SSF103481 188 288 1.57E-13 T 23-04-2016 MSIP34_RS13280 7650279fada9a4ab1ade90aadcb75ab2 293 PANTHER PTHR12715:SF12 5 283 1.2E-66 T 23-04-2016 MSIP34_RS05970 0c2685b1d1f9a79385f0cc7115a8a333 423 PANTHER PTHR35093:SF2 10 423 2.7E-103 T 23-04-2016 MSIP34_RS05970 0c2685b1d1f9a79385f0cc7115a8a333 423 SUPERFAMILY SSF56935 31 423 3.62E-93 T 23-04-2016 MSIP34_RS05970 0c2685b1d1f9a79385f0cc7115a8a333 423 Gene3D G3DSA:2.40.160.60 31 423 3.2E-122 T 23-04-2016 MSIP34_RS05970 0c2685b1d1f9a79385f0cc7115a8a333 423 PANTHER PTHR35093 10 423 2.7E-103 T 23-04-2016 MSIP34_RS05970 0c2685b1d1f9a79385f0cc7115a8a333 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 26 423 1.7E-109 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) MSIP34_RS00675 6ac6ec2542b9db0be82dea7c2caec250 305 PANTHER PTHR22916 9 300 2.1E-40 T 23-04-2016 MSIP34_RS00675 6ac6ec2542b9db0be82dea7c2caec250 305 SUPERFAMILY SSF53448 10 224 1.53E-45 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00675 6ac6ec2542b9db0be82dea7c2caec250 305 Pfam PF00535 Glycosyl transferase family 2 12 123 1.2E-30 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS00675 6ac6ec2542b9db0be82dea7c2caec250 305 Gene3D G3DSA:3.90.550.10 9 222 2.8E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS00985 c882c77c4db1ea5d5c963aebbf6e9a41 280 Pfam PF01435 Peptidase family M48 69 279 3.7E-39 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 MSIP34_RS00985 c882c77c4db1ea5d5c963aebbf6e9a41 280 Hamap MF_00188 Protease HtpX [htpX]. 5 279 27.884 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 MSIP34_RS00985 c882c77c4db1ea5d5c963aebbf6e9a41 280 PANTHER PTHR10120:SF19 1 280 1.6E-97 T 23-04-2016 MSIP34_RS00985 c882c77c4db1ea5d5c963aebbf6e9a41 280 Gene3D G3DSA:3.30.2010.10 57 147 1.3E-34 T 23-04-2016 MSIP34_RS00985 c882c77c4db1ea5d5c963aebbf6e9a41 280 PANTHER PTHR10120 1 280 1.6E-97 T 23-04-2016 MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 SUPERFAMILY SSF47781 20 82 1.45E-29 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 Pfam PF12836 Helix-hairpin-helix motif 20 80 1.8E-25 T 23-04-2016 MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 Gene3D G3DSA:1.10.150.320 18 82 2.1E-24 T 23-04-2016 MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 SMART SM00278 60 79 440.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 SMART SM00278 30 49 0.0047 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 20 80 3.6E-24 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain MSIP34_RS05610 647a1d70190aaa565dbcd641fa9be89c 99 PANTHER PTHR21180 14 82 3.4E-26 T 23-04-2016 MSIP34_RS09610 17f524713fd5c9103c9f2074fb4a9126 498 SUPERFAMILY SSF56112 295 451 2.73E-13 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS09610 17f524713fd5c9103c9f2074fb4a9126 498 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 294 465 1.7E-13 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 MSIP34_RS09610 17f524713fd5c9103c9f2074fb4a9126 498 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 64 212 3.3E-7 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 MSIP34_RS09610 17f524713fd5c9103c9f2074fb4a9126 498 Gene3D G3DSA:1.10.510.10 392 464 3.3E-5 T 23-04-2016 MSIP34_RS09610 17f524713fd5c9103c9f2074fb4a9126 498 SUPERFAMILY SSF56112 39 200 3.88E-5 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS13980 18ca51878f557e51af87ccd2450c1796 434 Gene3D G3DSA:3.40.50.720 60 126 9.1E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS13980 18ca51878f557e51af87ccd2450c1796 434 SUPERFAMILY SSF53335 20 434 1.05E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS13980 18ca51878f557e51af87ccd2450c1796 434 Pfam PF05050 Methyltransferase FkbM domain 233 395 1.4E-8 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS13980 18ca51878f557e51af87ccd2450c1796 434 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 229 393 1.4E-13 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- MSIP34_RS13980 18ca51878f557e51af87ccd2450c1796 434 Gene3D G3DSA:3.40.50.150 222 433 6.9E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00600 d7ae66e4289a22f3af64f6d0ee5535f5 469 PANTHER PTHR11699 3 464 1.1E-187 T 23-04-2016 MSIP34_RS00600 d7ae66e4289a22f3af64f6d0ee5535f5 469 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 240 247 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 MSIP34_RS00600 d7ae66e4289a22f3af64f6d0ee5535f5 469 SUPERFAMILY SSF53720 3 464 1.28E-149 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 MSIP34_RS00600 d7ae66e4289a22f3af64f6d0ee5535f5 469 Pfam PF00171 Aldehyde dehydrogenase family 20 464 6.1E-148 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS00600 d7ae66e4289a22f3af64f6d0ee5535f5 469 Gene3D G3DSA:3.40.605.10 3 254 2.4E-86 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 MSIP34_RS00600 d7ae66e4289a22f3af64f6d0ee5535f5 469 Gene3D G3DSA:3.40.309.10 255 436 1.5E-62 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 SUPERFAMILY SSF50249 12 88 3.68E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 ProSitePatterns PS00056 Ribosomal protein S17 signature. 62 74 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 PANTHER PTHR10744 12 89 6.8E-38 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 PRINTS PR00973 Ribosomal protein S17 family signature 30 53 6.5E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 PRINTS PR00973 Ribosomal protein S17 family signature 72 79 6.5E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 PRINTS PR00973 Ribosomal protein S17 family signature 62 72 6.5E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 Pfam PF00366 Ribosomal protein S17 16 82 1.2E-32 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 81 7.0E-28 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 Gene3D G3DSA:2.40.50.140 12 89 3.5E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 87 25.656 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01625 5155f6bbf30361992f591b430dfeb2da 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 81 9.1E-36 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07960 44b321e497335e2f7921f914ff18db58 277 SUPERFAMILY SSF103481 174 272 1.96E-10 T 23-04-2016 MSIP34_RS07960 44b321e497335e2f7921f914ff18db58 277 PANTHER PTHR22911 1 272 9.5E-51 T 23-04-2016 MSIP34_RS07960 44b321e497335e2f7921f914ff18db58 277 SUPERFAMILY SSF103481 30 130 2.22E-15 T 23-04-2016 MSIP34_RS07960 44b321e497335e2f7921f914ff18db58 277 Pfam PF00892 EamA-like transporter family 1 126 3.0E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS07960 44b321e497335e2f7921f914ff18db58 277 Pfam PF00892 EamA-like transporter family 140 266 2.7E-8 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS04605 9b8f2d73d4677a888a8ae23887e31d17 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 91 245 2.4E-13 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region MSIP34_RS04605 9b8f2d73d4677a888a8ae23887e31d17 290 Gene3D G3DSA:2.120.10.30 23 284 1.2E-35 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS04605 9b8f2d73d4677a888a8ae23887e31d17 290 SUPERFAMILY SSF63829 26 275 1.05E-32 T 23-04-2016 MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 SUPERFAMILY SSF52540 5 282 1.27E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 PANTHER PTHR12131 1 468 2.6E-144 T 23-04-2016 MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 Pfam PF12513 Mitochondrial degradasome RNA helicase subunit C terminal 422 467 2.3E-12 T 23-04-2016 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain GO:0016817 MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 Gene3D G3DSA:3.40.50.300 167 172 3.8E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 Gene3D G3DSA:3.40.50.300 10 114 3.8E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 SMART SM00490 186 275 7.4E-19 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 Gene3D G3DSA:3.40.50.300 173 295 2.4E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03720 46288c11fd56b30dab68da06a4d03c0a 484 Pfam PF00271 Helicase conserved C-terminal domain 168 275 8.7E-12 T 23-04-2016 IPR001650 Helicase, C-terminal MSIP34_RS06040 5b78d0578568094607bcd4509020d740 428 Gene3D G3DSA:1.20.1600.10 32 422 5.9E-51 T 23-04-2016 MSIP34_RS06040 5b78d0578568094607bcd4509020d740 428 PANTHER PTHR30203 35 422 2.0E-47 T 23-04-2016 MSIP34_RS06040 5b78d0578568094607bcd4509020d740 428 SUPERFAMILY SSF56954 1 422 4.71E-65 T 23-04-2016 MSIP34_RS06040 5b78d0578568094607bcd4509020d740 428 Pfam PF02321 Outer membrane efflux protein 37 222 3.5E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS06040 5b78d0578568094607bcd4509020d740 428 Pfam PF02321 Outer membrane efflux protein 253 422 1.8E-15 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 89 7.0E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 105 7.0E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 PRINTS PR00598 Bacterial regulatory protein MarR family signature 109 125 7.0E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 Pfam PF01047 MarR family 58 113 2.5E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 PANTHER PTHR33164:SF4 8 167 1.0E-24 T 23-04-2016 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 ProSitePatterns PS01117 MarR-type HTH domain signature. 88 122 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 SUPERFAMILY SSF46785 26 163 4.34E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 Gene3D G3DSA:1.10.10.10 31 164 1.6E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 PANTHER PTHR33164 8 167 1.0E-24 T 23-04-2016 MSIP34_RS05505 f8cebb0743b200b1df652f981d1de4e4 167 SMART SM00347 47 149 2.5E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 MSIP34_RS01800 7c50b84354887d1f833b5d5b69a25edc 403 Pfam PF07690 Major Facilitator Superfamily 23 349 6.7E-40 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS01800 7c50b84354887d1f833b5d5b69a25edc 403 PANTHER PTHR23515 1 395 1.4E-196 T 23-04-2016 MSIP34_RS01800 7c50b84354887d1f833b5d5b69a25edc 403 Gene3D G3DSA:1.20.1250.20 12 193 2.8E-21 T 23-04-2016 MSIP34_RS01800 7c50b84354887d1f833b5d5b69a25edc 403 PANTHER PTHR23515:SF4 1 395 1.4E-196 T 23-04-2016 MSIP34_RS01800 7c50b84354887d1f833b5d5b69a25edc 403 Gene3D G3DSA:1.20.1250.20 207 387 3.8E-20 T 23-04-2016 MSIP34_RS01800 7c50b84354887d1f833b5d5b69a25edc 403 SUPERFAMILY SSF103473 5 390 1.29E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS09085 861c4ae941747c8cff00fc0ca9b0cef0 354 Pfam PF10442 FIST C domain 212 334 2.4E-17 T 23-04-2016 IPR019494 FIST, C-domain MSIP34_RS09085 861c4ae941747c8cff00fc0ca9b0cef0 354 SMART SM01204 184 335 2.9E-19 T 23-04-2016 IPR019494 FIST, C-domain MSIP34_RS10415 89e0b6cc5096b0fd951697ccf3882921 554 SUPERFAMILY SSF52540 290 443 6.64E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10415 89e0b6cc5096b0fd951697ccf3882921 554 Gene3D G3DSA:3.40.50.300 274 441 7.1E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10415 89e0b6cc5096b0fd951697ccf3882921 554 PANTHER PTHR35372 217 445 4.2E-13 T 23-04-2016 MSIP34_RS13335 eaba5cfacb805ac4cbbd1979afab7c56 114 Pfam PF13997 YqjK-like protein 11 83 1.2E-16 T 23-04-2016 IPR025612 YqjK-like protein MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 Pfam PF13438 Domain of unknown function (DUF4113) 380 429 1.3E-17 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 PANTHER PTHR11076:SF40 11 412 1.7E-139 T 23-04-2016 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 Gene3D G3DSA:1.10.150.20 181 241 6.7E-15 T 23-04-2016 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 Gene3D G3DSA:3.30.70.270 78 164 6.8E-20 T 23-04-2016 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 SUPERFAMILY SSF56672 10 246 2.4E-59 T 23-04-2016 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 Pfam PF11799 impB/mucB/samB family C-terminal domain 251 365 1.3E-11 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 Pfam PF00817 impB/mucB/samB family 15 158 2.6E-29 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 Gene3D G3DSA:3.30.1490.100 258 344 4.0E-5 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 MSIP34_RS05930 da1f32020f17b446c5fc5cc27601c8be 430 PANTHER PTHR11076 11 412 1.7E-139 T 23-04-2016 MSIP34_RS00645 b8e1b18a127d6e9f756870416c530249 199 SUPERFAMILY SSF55469 6 193 1.23E-45 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS00645 b8e1b18a127d6e9f756870416c530249 199 Pfam PF00881 Nitroreductase family 91 162 7.7E-7 T 23-04-2016 IPR029479 Nitroreductase MSIP34_RS00645 b8e1b18a127d6e9f756870416c530249 199 Pfam PF00881 Nitroreductase family 16 58 2.7E-12 T 23-04-2016 IPR029479 Nitroreductase MSIP34_RS00645 b8e1b18a127d6e9f756870416c530249 199 Gene3D G3DSA:3.40.109.10 5 193 1.4E-46 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS00645 b8e1b18a127d6e9f756870416c530249 199 PANTHER PTHR23026 14 198 5.4E-27 T 23-04-2016 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Gene3D G3DSA:3.40.50.300 757 907 1.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Gene3D G3DSA:3.40.50.300 485 601 1.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070 27 90 1.5E-130 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070 337 804 1.5E-130 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070 117 202 1.5E-130 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070 847 1081 1.5E-130 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Pfam PF13361 UvrD-like helicase C-terminal domain 723 871 1.7E-14 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Pfam PF13361 UvrD-like helicase C-terminal domain 483 651 2.1E-6 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070:SF24 27 90 1.5E-130 T 23-04-2016 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070:SF24 337 804 1.5E-130 T 23-04-2016 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070:SF24 117 202 1.5E-130 T 23-04-2016 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 PANTHER PTHR11070:SF24 847 1081 1.5E-130 T 23-04-2016 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 469 1.6E-43 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Gene3D G3DSA:3.40.50.300 27 77 2.6E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Gene3D G3DSA:3.40.50.300 125 187 2.6E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Gene3D G3DSA:3.40.50.300 365 470 2.6E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 SUPERFAMILY SSF52540 848 881 2.76E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 SUPERFAMILY SSF52540 355 796 2.76E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 SUPERFAMILY SSF52540 21 81 2.76E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 SUPERFAMILY SSF52540 117 200 2.76E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 SUPERFAMILY SSF52980 964 1105 8.58E-8 T 23-04-2016 IPR011335 Restriction endonuclease type II-like MSIP34_RS06310 bf466e8d62744a9f3664ab4b04242623 1137 Gene3D G3DSA:1.10.486.10 610 705 2.0E-5 T 23-04-2016 MSIP34_RS02255 8198101b65178592576ebdb6044842ed 178 PANTHER PTHR21666 34 166 2.0E-37 T 23-04-2016 MSIP34_RS02255 8198101b65178592576ebdb6044842ed 178 SUPERFAMILY SSF54001 39 165 3.17E-43 T 23-04-2016 MSIP34_RS02255 8198101b65178592576ebdb6044842ed 178 Pfam PF00877 NlpC/P60 family 58 164 1.8E-31 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS02255 8198101b65178592576ebdb6044842ed 178 Gene3D G3DSA:3.90.1720.10 38 167 2.2E-47 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS08880 872ebb7a5c326f56bcd73563dde7179a 125 SUPERFAMILY SSF52172 5 121 4.7E-38 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS08880 872ebb7a5c326f56bcd73563dde7179a 125 Gene3D G3DSA:3.40.50.2300 5 122 5.0E-39 T 23-04-2016 MSIP34_RS08880 872ebb7a5c326f56bcd73563dde7179a 125 SMART SM00448 4 117 1.4E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08880 872ebb7a5c326f56bcd73563dde7179a 125 Pfam PF00072 Response regulator receiver domain 6 118 3.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08880 872ebb7a5c326f56bcd73563dde7179a 125 PANTHER PTHR26402 4 124 4.2E-39 T 23-04-2016 MSIP34_RS08815 8eb53356495de5364afbb0f3384b459d 137 PANTHER PTHR10681 14 134 1.5E-15 T 23-04-2016 MSIP34_RS08815 8eb53356495de5364afbb0f3384b459d 137 SUPERFAMILY SSF46458 14 134 2.67E-36 T 23-04-2016 IPR009050 Globin-like MSIP34_RS08815 8eb53356495de5364afbb0f3384b459d 137 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 63 87 - T 23-04-2016 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 MSIP34_RS08815 8eb53356495de5364afbb0f3384b459d 137 Pfam PF01152 Bacterial-like globin 14 125 3.8E-39 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 MSIP34_RS08815 8eb53356495de5364afbb0f3384b459d 137 Gene3D G3DSA:1.10.490.10 12 135 7.0E-44 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 MSIP34_RS06295 0776634264bf7e1accc37b9117545eac 374 PIRSF PIRSF015557 3 374 3.7E-144 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 MSIP34_RS06295 0776634264bf7e1accc37b9117545eac 374 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 8 370 4.7E-147 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 MSIP34_RS06295 0776634264bf7e1accc37b9117545eac 374 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 8 371 7.0E-145 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 MSIP34_RS07145 ce15c2a81cfabc0f8adcbd4c33f734e7 279 PANTHER PTHR13773:SF0 1 263 2.3E-53 T 23-04-2016 MSIP34_RS07145 ce15c2a81cfabc0f8adcbd4c33f734e7 279 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 222 248 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 MSIP34_RS07145 ce15c2a81cfabc0f8adcbd4c33f734e7 279 Pfam PF01148 Cytidylyltransferase family 3 262 5.3E-56 T 23-04-2016 MSIP34_RS07145 ce15c2a81cfabc0f8adcbd4c33f734e7 279 PANTHER PTHR13773 1 263 2.3E-53 T 23-04-2016 MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 SUPERFAMILY SSF52540 4 224 9.78E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 Gene3D G3DSA:3.40.50.300 2 233 7.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 SMART SM00382 30 211 9.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 PANTHER PTHR24220:SF160 7 225 2.3E-86 T 23-04-2016 MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 Pfam PF13732 Domain of unknown function (DUF4162) 217 304 5.2E-7 T 23-04-2016 IPR025302 Domain of unknown function DUF4162 MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 Pfam PF00005 ABC transporter 22 164 2.2E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS10130 edc0c110522f789d691c026723432c6f 310 PANTHER PTHR24220 7 225 2.3E-86 T 23-04-2016 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 Gene3D G3DSA:3.30.200.20 5 118 7.0E-45 T 23-04-2016 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 PANTHER PTHR11609 10 294 8.7E-140 T 23-04-2016 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 13 294 27.055 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 ProSitePatterns PS01058 SAICAR synthetase signature 2. 206 214 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 16 295 4.4E-84 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 Pfam PF01259 SAICAR synthetase 15 269 2.2E-102 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 SUPERFAMILY SSF56104 6 296 8.17E-106 T 23-04-2016 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 Gene3D G3DSA:3.30.470.20 119 249 8.8E-55 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 MSIP34_RS02490 3af8efbeda0c08dec26df77d756a30a4 299 PANTHER PTHR11609:SF6 10 294 8.7E-140 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PRINTS PR00113 Alkaline phosphatase signature 159 179 1.6E-32 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PRINTS PR00113 Alkaline phosphatase signature 214 229 1.6E-32 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PRINTS PR00113 Alkaline phosphatase signature 259 279 1.6E-32 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PRINTS PR00113 Alkaline phosphatase signature 429 458 1.6E-32 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PANTHER PTHR11596 612 653 7.1E-104 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PANTHER PTHR11596 135 338 7.1E-104 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PANTHER PTHR11596 359 564 7.1E-104 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PANTHER PTHR11596:SF5 612 653 7.1E-104 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PANTHER PTHR11596:SF5 135 338 7.1E-104 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 PANTHER PTHR11596:SF5 359 564 7.1E-104 T 23-04-2016 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 Pfam PF00245 Alkaline phosphatase 159 654 9.5E-76 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 SUPERFAMILY SSF53649 152 324 6.8E-99 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 SUPERFAMILY SSF53649 612 658 6.8E-99 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 SUPERFAMILY SSF53649 358 509 6.8E-99 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 Gene3D G3DSA:3.40.720.10 603 659 9.8E-113 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 Gene3D G3DSA:3.40.720.10 151 555 9.8E-113 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS05225 2161cddda1a05fd382bf3687f63fd200 664 SMART SM00098 160 662 1.9E-30 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 MSIP34_RS12320 02ae3e01f1c7796d4957b6e7369facd3 175 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 171 6.6E-70 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 MSIP34_RS12320 02ae3e01f1c7796d4957b6e7369facd3 175 Gene3D G3DSA:3.40.50.2020 2 173 7.9E-70 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS12320 02ae3e01f1c7796d4957b6e7369facd3 175 Pfam PF00156 Phosphoribosyl transferase domain 36 157 7.1E-17 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 MSIP34_RS12320 02ae3e01f1c7796d4957b6e7369facd3 175 SUPERFAMILY SSF53271 2 172 2.13E-53 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS12320 02ae3e01f1c7796d4957b6e7369facd3 175 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 172 37.582 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 MSIP34_RS12320 02ae3e01f1c7796d4957b6e7369facd3 175 PANTHER PTHR32315 2 175 6.8E-82 T 23-04-2016 MSIP34_RS00940 371765ae006910d6a668d55898fa1a1b 415 Pfam PF01966 HD domain 174 295 1.3E-13 T 23-04-2016 IPR006674 HD domain MSIP34_RS00940 371765ae006910d6a668d55898fa1a1b 415 Pfam PF11871 Domain of unknown function (DUF3391) 2 141 4.1E-33 T 23-04-2016 IPR021812 Protein of unknown function DUF3391 MSIP34_RS00940 371765ae006910d6a668d55898fa1a1b 415 SUPERFAMILY SSF109604 166 333 4.94E-33 T 23-04-2016 MSIP34_RS00940 371765ae006910d6a668d55898fa1a1b 415 TIGRFAM TIGR00277 HDIG: HDIG domain 173 263 4.3E-8 T 23-04-2016 IPR006675 HDIG domain MSIP34_RS00940 371765ae006910d6a668d55898fa1a1b 415 SMART SM00471 169 305 2.2E-8 T 23-04-2016 IPR003607 HD/PDEase domain MSIP34_RS00940 371765ae006910d6a668d55898fa1a1b 415 Gene3D G3DSA:1.10.3210.10 156 332 2.3E-27 T 23-04-2016 IPR006674 HD domain MSIP34_RS04865 564e18c37eac01f1b1e3366f0412a25b 293 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 33 293 2.9E-34 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 MSIP34_RS04865 564e18c37eac01f1b1e3366f0412a25b 293 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 12 293 3.8E-22 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 MSIP34_RS09940 69575aad16773e943dbd18b100f93de2 134 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 21 125 1.4E-32 T 23-04-2016 IPR018673 Protein of unknown function DUF2141 MSIP34_RS05425 6b19036e74494afa9164827aafc575bc 378 PANTHER PTHR23501 1 377 4.0E-132 T 23-04-2016 MSIP34_RS05425 6b19036e74494afa9164827aafc575bc 378 PANTHER PTHR23501:SF4 1 377 4.0E-132 T 23-04-2016 MSIP34_RS05425 6b19036e74494afa9164827aafc575bc 378 Pfam PF07690 Major Facilitator Superfamily 9 320 6.8E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS05425 6b19036e74494afa9164827aafc575bc 378 SUPERFAMILY SSF103473 4 377 6.8E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS05425 6b19036e74494afa9164827aafc575bc 378 Gene3D G3DSA:1.20.1250.20 5 181 1.0E-27 T 23-04-2016 MSIP34_RS05425 6b19036e74494afa9164827aafc575bc 378 Gene3D G3DSA:1.20.1250.20 198 376 1.5E-13 T 23-04-2016 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 SMART SM00448 2 115 2.4E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 SUPERFAMILY SSF46894 131 206 5.1E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 Pfam PF00072 Response regulator receiver domain 4 116 3.1E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 SMART SM00421 142 199 1.8E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 Gene3D G3DSA:3.40.50.2300 2 119 9.3E-23 T 23-04-2016 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 PANTHER PTHR26402 2 205 5.1E-36 T 23-04-2016 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 2.7E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 SUPERFAMILY SSF52172 1 128 3.7E-22 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 5.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 5.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 5.3E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 Gene3D G3DSA:1.10.10.10 120 206 7.4E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS06865 4c52794ceb41e17ddc4329252cdc6096 214 PANTHER PTHR26402:SF458 2 205 5.1E-36 T 23-04-2016 MSIP34_RS05365 d3fef3c4dff760d7a87cc6d0c99c544e 90 Pfam PF13670 Peptidase propeptide and YPEB domain 10 87 1.2E-25 T 23-04-2016 IPR025711 PepSY domain MSIP34_RS04945 459c892f3a1d135bb4595655e8193e2d 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 221 1.3E-46 T 23-04-2016 MSIP34_RS04945 459c892f3a1d135bb4595655e8193e2d 229 PANTHER PTHR23291 6 221 3.9E-58 T 23-04-2016 IPR006214 Bax inhibitor 1-related MSIP34_RS04945 459c892f3a1d135bb4595655e8193e2d 229 PANTHER PTHR23291:SF37 6 221 3.9E-58 T 23-04-2016 MSIP34_RS05205 8a4931ca38650f692a3ab391da149e7b 523 PANTHER PTHR38657:SF1 7 523 4.3E-226 T 23-04-2016 MSIP34_RS05205 8a4931ca38650f692a3ab391da149e7b 523 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 19 236 1.6E-74 T 23-04-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein MSIP34_RS05205 8a4931ca38650f692a3ab391da149e7b 523 PANTHER PTHR38657 7 523 4.3E-226 T 23-04-2016 MSIP34_RS05205 8a4931ca38650f692a3ab391da149e7b 523 Gene3D G3DSA:1.10.579.10 326 414 1.8E-5 T 23-04-2016 MSIP34_RS05205 8a4931ca38650f692a3ab391da149e7b 523 Gene3D G3DSA:1.25.40.80 240 325 2.7E-10 T 23-04-2016 MSIP34_RS05205 8a4931ca38650f692a3ab391da149e7b 523 SUPERFAMILY SSF48173 244 508 2.35E-63 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain MSIP34_RS01340 177f5d942c82115eba8486f642672e15 159 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 147 7.0E-57 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 MSIP34_RS01340 177f5d942c82115eba8486f642672e15 159 Pfam PF02470 MlaD protein 39 116 5.4E-21 T 23-04-2016 IPR003399 Mce/MlaD MSIP34_RS01340 177f5d942c82115eba8486f642672e15 159 PANTHER PTHR33371 1 146 1.1E-39 T 23-04-2016 MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 SUPERFAMILY SSF75217 75 242 1.44E-51 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 240 1.1E-63 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 PANTHER PTHR30027 1 243 2.2E-81 T 23-04-2016 MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 PANTHER PTHR30027:SF3 1 243 2.2E-81 T 23-04-2016 MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 Gene3D G3DSA:3.40.1280.10 2 242 3.5E-83 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 SUPERFAMILY SSF88697 4 67 1.02E-15 T 23-04-2016 IPR015947 PUA-like domain MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 Pfam PF04452 RNA methyltransferase 19 237 2.3E-71 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS02445 8bc4924b5510d9753dcf721cf6eb43cc 243 PIRSF PIRSF015601 3 242 2.1E-58 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 MSIP34_RS01350 1c43bea4069ba63fb435db2fdfc3edfc 97 Pfam PF13466 STAS domain 13 88 6.8E-14 T 23-04-2016 IPR002645 STAS domain MSIP34_RS01350 1c43bea4069ba63fb435db2fdfc3edfc 97 SUPERFAMILY SSF52091 10 93 4.12E-10 T 23-04-2016 IPR002645 STAS domain MSIP34_RS01350 1c43bea4069ba63fb435db2fdfc3edfc 97 Gene3D G3DSA:3.30.750.24 12 93 6.7E-10 T 23-04-2016 IPR002645 STAS domain MSIP34_RS02075 079019bb565fd1e5622fb0af41f39114 163 Pfam PF04073 Aminoacyl-tRNA editing domain 30 148 1.1E-27 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MSIP34_RS02075 079019bb565fd1e5622fb0af41f39114 163 SUPERFAMILY SSF55826 3 155 3.14E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MSIP34_RS02075 079019bb565fd1e5622fb0af41f39114 163 PANTHER PTHR30411 6 152 2.9E-20 T 23-04-2016 MSIP34_RS02075 079019bb565fd1e5622fb0af41f39114 163 Gene3D G3DSA:3.90.960.10 5 152 4.5E-34 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 53 73 - T 23-04-2016 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 Pfam PF12706 Beta-lactamase superfamily domain 22 204 1.1E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 PANTHER PTHR13754:SF15 1 257 2.0E-61 T 23-04-2016 MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 SUPERFAMILY SSF56281 1 225 1.05E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 PANTHER PTHR13754 1 257 2.0E-61 T 23-04-2016 MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 Gene3D G3DSA:3.60.15.10 1 228 2.4E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS09110 306a349e1505e6051178c9a7609652a1 257 SMART SM00849 11 200 6.0E-8 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS06650 780b6589c85f59b9040f1b1799b1dcaa 261 Pfam PF06966 Protein of unknown function (DUF1295) 22 245 2.7E-65 T 23-04-2016 IPR010721 Protein of unknown function DUF1295 MSIP34_RS06650 780b6589c85f59b9040f1b1799b1dcaa 261 PANTHER PTHR32251 1 257 7.8E-69 T 23-04-2016 MSIP34_RS12235 c4a55ae54f7bbe628e047453fbc61dec 314 Pfam PF02470 MlaD protein 45 112 1.4E-12 T 23-04-2016 IPR003399 Mce/MlaD MSIP34_RS12235 c4a55ae54f7bbe628e047453fbc61dec 314 PANTHER PTHR36698:SF2 2 312 1.1E-34 T 23-04-2016 MSIP34_RS12235 c4a55ae54f7bbe628e047453fbc61dec 314 PANTHER PTHR36698 2 312 1.1E-34 T 23-04-2016 MSIP34_RS02550 33c38c23e7a055b184658ca8bf73c7aa 67 PANTHER PTHR35175 10 66 1.1E-16 T 23-04-2016 MSIP34_RS02550 33c38c23e7a055b184658ca8bf73c7aa 67 Pfam PF06945 Protein of unknown function (DUF1289) 12 59 1.9E-21 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 MSIP34_RS01865 ea6a8774ca0eb7226ba7495d3c6b70ec 65 Pfam PF04328 Protein of unknown function (DUF466) 10 65 9.9E-21 T 23-04-2016 IPR007423 Protein of unknown function DUF466 MSIP34_RS02285 cec7680b73b8c57b1af1b14b495fb550 405 Gene3D G3DSA:3.10.180.10 291 385 9.2E-5 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS02285 cec7680b73b8c57b1af1b14b495fb550 405 SUPERFAMILY SSF54593 44 387 1.13E-5 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 Pfam PF00005 ABC transporter 350 500 2.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 Gene3D G3DSA:1.20.1560.10 19 316 2.1E-37 T 23-04-2016 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 Pfam PF00664 ABC transporter transmembrane region 29 285 8.9E-14 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 SUPERFAMILY SSF52540 325 561 8.81E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 PANTHER PTHR24222:SF0 1 561 2.4E-194 T 23-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 Gene3D G3DSA:3.40.50.300 334 561 2.5E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 22 560 1.5E-185 T 23-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 SMART SM00382 359 548 2.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 SUPERFAMILY SSF90123 18 320 2.49E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 MSIP34_RS04205 edca094fcaebcfa2622ee85003148c01 581 PANTHER PTHR24222 1 561 2.4E-194 T 23-04-2016 MSIP34_RS03125 2e2ec8b32751012f701323fbabb942ef 211 PANTHER PTHR33508 1 211 7.1E-80 T 23-04-2016 MSIP34_RS03125 2e2ec8b32751012f701323fbabb942ef 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 202 2.7E-61 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 MSIP34_RS03125 2e2ec8b32751012f701323fbabb942ef 211 PANTHER PTHR33508:SF1 1 211 7.1E-80 T 23-04-2016 MSIP34_RS03125 2e2ec8b32751012f701323fbabb942ef 211 Pfam PF01914 MarC family integral membrane protein 5 206 5.4E-62 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 432 2.2E-170 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 Gene3D G3DSA:3.20.20.30 350 438 4.8E-137 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 Gene3D G3DSA:3.20.20.30 2 311 4.8E-137 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 SUPERFAMILY SSF51679 5 438 1.02E-133 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 PANTHER PTHR30011 2 442 2.4E-196 T 23-04-2016 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 PIRSF PIRSF000337 4 443 8.2E-156 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 Pfam PF00296 Luciferase-like monooxygenase 19 383 9.9E-64 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS08955 a4b5cea9ab3eebb09c95969f16cc1035 443 PANTHER PTHR30011:SF18 2 442 2.4E-196 T 23-04-2016 MSIP34_RS04770 79e52a633b23e2ec6e34df52e5e6dae4 400 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 395 28.552 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS04770 79e52a633b23e2ec6e34df52e5e6dae4 400 Pfam PF13742 OB-fold nucleic acid binding domain 9 100 3.4E-28 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 MSIP34_RS04770 79e52a633b23e2ec6e34df52e5e6dae4 400 PANTHER PTHR30008:SF0 1 397 2.8E-153 T 23-04-2016 MSIP34_RS04770 79e52a633b23e2ec6e34df52e5e6dae4 400 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 10 394 4.1E-150 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 MSIP34_RS04770 79e52a633b23e2ec6e34df52e5e6dae4 400 Pfam PF02601 Exonuclease VII, large subunit 125 392 5.4E-88 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 MSIP34_RS04770 79e52a633b23e2ec6e34df52e5e6dae4 400 PANTHER PTHR30008 1 397 2.8E-153 T 23-04-2016 MSIP34_RS04755 ec0d84635680df2d184120e566d9d052 279 PANTHER PTHR22726 2 275 1.6E-68 T 23-04-2016 MSIP34_RS04755 ec0d84635680df2d184120e566d9d052 279 Gene3D G3DSA:3.30.2010.10 68 156 3.2E-19 T 23-04-2016 MSIP34_RS04755 ec0d84635680df2d184120e566d9d052 279 Pfam PF01435 Peptidase family M48 71 263 8.6E-39 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 MSIP34_RS07780 d808bd4bfbebf383b6fc8c4987b854e0 305 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 305 164.259 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 MSIP34_RS07780 d808bd4bfbebf383b6fc8c4987b854e0 305 Gene3D G3DSA:3.60.15.10 1 305 1.1E-116 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07780 d808bd4bfbebf383b6fc8c4987b854e0 305 Pfam PF12706 Beta-lactamase superfamily domain 50 272 8.6E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07780 d808bd4bfbebf383b6fc8c4987b854e0 305 SUPERFAMILY SSF56281 1 305 5.53E-60 T 23-04-2016 IPR001279 Metallo-beta-lactamase MSIP34_RS07780 d808bd4bfbebf383b6fc8c4987b854e0 305 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 305 1.8E-140 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 MSIP34_RS07370 52b7eed8b65666b246eaa209ed9e0d13 239 PANTHER PTHR10108 67 217 7.2E-24 T 23-04-2016 MSIP34_RS07370 52b7eed8b65666b246eaa209ed9e0d13 239 PANTHER PTHR10108:SF836 67 217 7.2E-24 T 23-04-2016 MSIP34_RS07370 52b7eed8b65666b246eaa209ed9e0d13 239 Gene3D G3DSA:3.40.50.150 69 205 9.6E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS07370 52b7eed8b65666b246eaa209ed9e0d13 239 Pfam PF08241 Methyltransferase domain 67 115 4.8E-8 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 MSIP34_RS07370 52b7eed8b65666b246eaa209ed9e0d13 239 SUPERFAMILY SSF53335 68 205 1.13E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05085 2ee776af88ff2eac9f41104f9edd8773 179 PANTHER PTHR38596 1 178 6.0E-72 T 23-04-2016 MSIP34_RS05085 2ee776af88ff2eac9f41104f9edd8773 179 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 179 86.119 T 23-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 MSIP34_RS05085 2ee776af88ff2eac9f41104f9edd8773 179 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 17 176 4.3E-60 T 23-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria MSIP34_RS05085 2ee776af88ff2eac9f41104f9edd8773 179 PANTHER PTHR38596:SF1 1 178 6.0E-72 T 23-04-2016 MSIP34_RS05085 2ee776af88ff2eac9f41104f9edd8773 179 Pfam PF03350 Uncharacterized protein family, UPF0114 21 137 5.6E-41 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 MSIP34_RS00640 46f87924d2f73fca79b5d93771b4a2f1 230 SUPERFAMILY SSF53639 16 210 2.16E-19 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS00640 46f87924d2f73fca79b5d93771b4a2f1 230 Gene3D G3DSA:3.40.225.10 86 205 9.4E-12 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS00640 46f87924d2f73fca79b5d93771b4a2f1 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 72 187 7.4E-8 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal MSIP34_RS04425 bda07342420dec73b0e0761bc3fa700f 326 SUPERFAMILY SSF53300 80 236 2.52E-20 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04425 bda07342420dec73b0e0761bc3fa700f 326 Gene3D G3DSA:3.40.50.410 80 200 1.4E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04425 bda07342420dec73b0e0761bc3fa700f 326 SMART SM00327 79 251 1.3E-10 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04425 bda07342420dec73b0e0761bc3fa700f 326 Pfam PF13519 von Willebrand factor type A domain 82 196 1.3E-14 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS03845 8533501eacdc324c6d9d8b470344c041 106 Pfam PF05400 Flagellar protein FliT 20 104 1.1E-22 T 23-04-2016 IPR008622 Flagellar protein FliT MSIP34_RS03845 8533501eacdc324c6d9d8b470344c041 106 Gene3D G3DSA:1.20.58.380 7 91 1.9E-25 T 23-04-2016 MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 PANTHER PTHR33693:SF1 181 370 6.7E-75 T 23-04-2016 MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 Pfam PF03167 Uracil DNA glycosylase superfamily 206 352 5.8E-45 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 192 353 8.2E-63 T 23-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 PANTHER PTHR33693 181 370 6.7E-75 T 23-04-2016 MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 SMART SM00987 206 353 1.4E-43 T 23-04-2016 MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 Gene3D G3DSA:3.40.470.10 181 364 1.7E-71 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 SUPERFAMILY SSF52141 181 362 6.87E-62 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS11495 760dd7fee97a63588265198203cbaeed 377 SMART SM00986 206 353 1.4E-43 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS07450 121920f7cfdb46041a2ec1a6a7ea8f67 338 PANTHER PTHR30349:SF20 85 337 2.8E-30 T 23-04-2016 MSIP34_RS07450 121920f7cfdb46041a2ec1a6a7ea8f67 338 SUPERFAMILY SSF56349 58 324 5.0E-41 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS07450 121920f7cfdb46041a2ec1a6a7ea8f67 338 Pfam PF00589 Phage integrase family 186 318 7.0E-22 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS07450 121920f7cfdb46041a2ec1a6a7ea8f67 338 Gene3D G3DSA:1.10.443.10 159 332 9.3E-33 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 MSIP34_RS07450 121920f7cfdb46041a2ec1a6a7ea8f67 338 PANTHER PTHR30349 85 337 2.8E-30 T 23-04-2016 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 Pfam PF04333 MlaA lipoprotein 27 220 3.1E-80 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 PANTHER PTHR30035:SF3 24 236 1.0E-68 T 23-04-2016 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 PRINTS PR01805 VacJ lipoprotein signature 28 41 6.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 PRINTS PR01805 VacJ lipoprotein signature 96 113 6.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 PRINTS PR01805 VacJ lipoprotein signature 45 61 6.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 PRINTS PR01805 VacJ lipoprotein signature 132 149 6.3E-27 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 MSIP34_RS10955 f8f3528d89ef33a8d0c2bd89d1939699 246 PANTHER PTHR30035 24 236 1.0E-68 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 PIRSF PIRSF000443 1 378 1.7E-143 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 Pfam PF00561 alpha/beta hydrolase fold 48 356 2.1E-33 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 PANTHER PTHR32268:SF11 3 373 2.6E-178 T 23-04-2016 MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 18 371 2.0E-143 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 Gene3D G3DSA:3.40.50.1820 238 372 5.7E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 Gene3D G3DSA:3.40.50.1820 17 205 5.7E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 5 372 49.987 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 SUPERFAMILY SSF53474 10 372 7.46E-105 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS12690 cc7022ec613b62b377c1bdade142170a 379 PANTHER PTHR32268 3 373 2.6E-178 T 23-04-2016 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 Gene3D G3DSA:3.40.50.1470 4 191 3.3E-72 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 SUPERFAMILY SSF53178 4 189 1.02E-67 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 35.269 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 PANTHER PTHR17224 4 191 4.1E-75 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 Pfam PF01195 Peptidyl-tRNA hydrolase 6 186 2.8E-57 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 PANTHER PTHR17224:SF1 4 191 4.1E-75 T 23-04-2016 MSIP34_RS10165 6c7db7d27202d1726a48e7c738c131b9 195 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 189 3.6E-62 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 MSIP34_RS06965 a19f61cf0e637f42e72dc0e81694f5e7 334 PANTHER PTHR30365 1 334 5.0E-166 T 23-04-2016 MSIP34_RS06965 a19f61cf0e637f42e72dc0e81694f5e7 334 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 323 9.9E-100 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MSIP34_RS06965 a19f61cf0e637f42e72dc0e81694f5e7 334 PANTHER PTHR30365:SF4 1 334 5.0E-166 T 23-04-2016 MSIP34_RS06965 a19f61cf0e637f42e72dc0e81694f5e7 334 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 213 9.7E-44 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MSIP34_RS06965 a19f61cf0e637f42e72dc0e81694f5e7 334 PIRSF PIRSF000267 1 334 1.7E-89 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 SUPERFAMILY SSF103473 3 384 3.92E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 362 1.9E-72 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 Gene3D G3DSA:1.20.1250.20 207 386 3.3E-9 T 23-04-2016 MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 Gene3D G3DSA:1.20.1250.20 7 187 1.6E-26 T 23-04-2016 MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 PANTHER PTHR23502:SF19 3 380 4.9E-86 T 23-04-2016 MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 Pfam PF07690 Major Facilitator Superfamily 11 349 6.7E-44 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS03730 c64375274265c1f35b6065b40ff241d4 395 PANTHER PTHR23502 3 380 4.9E-86 T 23-04-2016 MSIP34_RS06205 046df8e9a0b20730e9a8cf3ca225fd41 406 Pfam PF02687 FtsX-like permease family 288 399 1.2E-21 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 MSIP34_RS06205 046df8e9a0b20730e9a8cf3ca225fd41 406 PANTHER PTHR30572 9 406 1.9E-119 T 23-04-2016 MSIP34_RS06205 046df8e9a0b20730e9a8cf3ca225fd41 406 Pfam PF12704 MacB-like periplasmic core domain 20 244 2.4E-38 T 23-04-2016 IPR025857 MacB-like periplasmic core domain MSIP34_RS06205 046df8e9a0b20730e9a8cf3ca225fd41 406 PANTHER PTHR30572:SF7 9 406 1.9E-119 T 23-04-2016 MSIP34_RS13110 0384f8777dac7cf1f7cde943df70e493 211 PANTHER PTHR41795 5 204 2.4E-14 T 23-04-2016 MSIP34_RS13110 0384f8777dac7cf1f7cde943df70e493 211 Pfam PF06055 Exopolysaccharide synthesis, ExoD 9 190 2.0E-40 T 23-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD MSIP34_RS13110 0384f8777dac7cf1f7cde943df70e493 211 PIRSF PIRSF033239 1 205 3.6E-31 T 23-04-2016 IPR010331 Exopolysaccharide synthesis, ExoD MSIP34_RS07590 8013132b04d8af0069c56289a0821733 208 SUPERFAMILY SSF53633 1 141 1.83E-12 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS07590 8013132b04d8af0069c56289a0821733 208 Pfam PF00696 Amino acid kinase family 2 83 2.1E-7 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS07590 8013132b04d8af0069c56289a0821733 208 Gene3D G3DSA:3.40.1160.10 1 47 3.1E-5 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 SUPERFAMILY SSF56752 8 266 8.37E-63 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 PANTHER PTHR11825:SF55 12 277 1.7E-56 T 23-04-2016 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 8 267 2.5E-82 T 23-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 PANTHER PTHR11825 12 277 1.7E-56 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 Gene3D G3DSA:3.20.10.10 128 267 3.4E-38 T 23-04-2016 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 Gene3D G3DSA:3.30.470.10 8 110 9.4E-24 T 23-04-2016 MSIP34_RS07035 5a09470b0e0af1e78c9be46e8d3a064e 277 Pfam PF01063 Amino-transferase class IV 29 250 5.1E-39 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 MSIP34_RS01455 0c031fdccb215e94a318b9fff5bf9ebc 258 SUPERFAMILY SSF102705 11 257 1.44E-73 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MSIP34_RS01455 0c031fdccb215e94a318b9fff5bf9ebc 258 Gene3D G3DSA:3.40.1390.30 11 117 5.3E-36 T 23-04-2016 MSIP34_RS01455 0c031fdccb215e94a318b9fff5bf9ebc 258 PANTHER PTHR13799 2 254 1.2E-66 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MSIP34_RS01455 0c031fdccb215e94a318b9fff5bf9ebc 258 Gene3D G3DSA:3.40.1390.30 118 225 3.5E-24 T 23-04-2016 MSIP34_RS01455 0c031fdccb215e94a318b9fff5bf9ebc 258 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 11 256 4.0E-56 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MSIP34_RS01455 0c031fdccb215e94a318b9fff5bf9ebc 258 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 16 246 3.0E-50 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 MSIP34_RS13905 8bf7c9d47257d91084f7afe257a1a9c1 398 SUPERFAMILY SSF103473 15 391 8.37E-28 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS13905 8bf7c9d47257d91084f7afe257a1a9c1 398 Pfam PF07690 Major Facilitator Superfamily 18 356 3.4E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS13905 8bf7c9d47257d91084f7afe257a1a9c1 398 Gene3D G3DSA:1.20.1250.20 13 189 1.8E-12 T 23-04-2016 MSIP34_RS13905 8bf7c9d47257d91084f7afe257a1a9c1 398 PANTHER PTHR23513:SF8 1 393 8.7E-114 T 23-04-2016 MSIP34_RS13905 8bf7c9d47257d91084f7afe257a1a9c1 398 PANTHER PTHR23513 1 393 8.7E-114 T 23-04-2016 MSIP34_RS05985 cf73f80c46d08c1f3de4c2ff62e50ec0 124 PIRSF PIRSF009151 1 122 1.0E-50 T 23-04-2016 IPR008497 Protein of unknown function DUF779 MSIP34_RS05985 cf73f80c46d08c1f3de4c2ff62e50ec0 124 Pfam PF05610 Protein of unknown function (DUF779) 15 108 5.4E-45 T 23-04-2016 IPR008497 Protein of unknown function DUF779 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 Pfam PF01964 Radical SAM ThiC family 143 588 6.4E-200 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 PANTHER PTHR30557 191 624 0.0 T 23-04-2016 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 PANTHER PTHR30557 134 164 0.0 T 23-04-2016 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 PANTHER PTHR30557 23 100 0.0 T 23-04-2016 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 141 594 56.304 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 Pfam PF13667 ThiC-associated domain 25 102 4.9E-34 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 141 592 2.2E-215 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 PANTHER PTHR30557:SF1 191 624 0.0 T 23-04-2016 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 PANTHER PTHR30557:SF1 134 164 0.0 T 23-04-2016 MSIP34_RS13130 0e424b6b4905fbfe6020ef54c05957c4 627 PANTHER PTHR30557:SF1 23 100 0.0 T 23-04-2016 MSIP34_RS04950 2233eea9d9b812c798ec4c30591018b3 175 SUPERFAMILY SSF53927 9 165 7.61E-58 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 MSIP34_RS04950 2233eea9d9b812c798ec4c30591018b3 175 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 20 161 48.439 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 MSIP34_RS04950 2233eea9d9b812c798ec4c30591018b3 175 Pfam PF14437 MafB19-like deaminase 16 161 3.4E-34 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 MSIP34_RS04950 2233eea9d9b812c798ec4c30591018b3 175 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 65 102 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MSIP34_RS04950 2233eea9d9b812c798ec4c30591018b3 175 Gene3D G3DSA:3.40.140.10 7 158 1.8E-61 T 23-04-2016 MSIP34_RS04950 2233eea9d9b812c798ec4c30591018b3 175 PANTHER PTHR11079 5 164 7.9E-52 T 23-04-2016 MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 PANTHER PTHR10108:SF910 12 237 1.4E-117 T 23-04-2016 MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 Gene3D G3DSA:3.40.50.150 28 220 8.7E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 15 239 36.628 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 SUPERFAMILY SSF53335 21 221 8.98E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 PANTHER PTHR10108 12 237 1.4E-117 T 23-04-2016 MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 Pfam PF13489 Methyltransferase domain 48 208 6.9E-26 T 23-04-2016 MSIP34_RS08510 3c51c83d5968d3cd8dfce912f309e53c 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 17 234 2.0E-84 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 MSIP34_RS10000 9c8e87b9ea02018a568b5540e16f34be 415 PANTHER PTHR11706:SF43 9 415 5.9E-118 T 23-04-2016 MSIP34_RS10000 9c8e87b9ea02018a568b5540e16f34be 415 PANTHER PTHR11706 9 415 5.9E-118 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS10000 9c8e87b9ea02018a568b5540e16f34be 415 Pfam PF01566 Natural resistance-associated macrophage protein 28 390 6.4E-84 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 MSIP34_RS09830 ec679d5fe5b6f4cdc4c01260f3f88f3b 293 PANTHER PTHR11795:SF398 1 293 9.8E-70 T 23-04-2016 MSIP34_RS09830 ec679d5fe5b6f4cdc4c01260f3f88f3b 293 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 278 8.1E-26 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 MSIP34_RS09830 ec679d5fe5b6f4cdc4c01260f3f88f3b 293 PANTHER PTHR11795 1 293 9.8E-70 T 23-04-2016 MSIP34_RS09530 936bd0f7a512498ad7674881f1a5a7e8 287 Hamap MF_00361 NAD kinase [nadK]. 6 286 33.825 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 MSIP34_RS09530 936bd0f7a512498ad7674881f1a5a7e8 287 Pfam PF01513 ATP-NAD kinase 43 269 1.1E-62 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 MSIP34_RS09530 936bd0f7a512498ad7674881f1a5a7e8 287 Gene3D G3DSA:3.40.50.10330 1 147 1.5E-36 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 MSIP34_RS09530 936bd0f7a512498ad7674881f1a5a7e8 287 Gene3D G3DSA:2.60.200.30 148 260 9.3E-44 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 MSIP34_RS09530 936bd0f7a512498ad7674881f1a5a7e8 287 PANTHER PTHR20275 2 287 3.1E-88 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 MSIP34_RS09530 936bd0f7a512498ad7674881f1a5a7e8 287 SUPERFAMILY SSF111331 7 287 1.57E-87 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain MSIP34_RS09255 ca5427930e78d6ed76d66a859e486acd 318 PANTHER PTHR22916 1 286 1.0E-50 T 23-04-2016 MSIP34_RS09255 ca5427930e78d6ed76d66a859e486acd 318 SUPERFAMILY SSF53448 4 234 3.58E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS09255 ca5427930e78d6ed76d66a859e486acd 318 Pfam PF00535 Glycosyl transferase family 2 6 169 6.8E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like MSIP34_RS09255 ca5427930e78d6ed76d66a859e486acd 318 Gene3D G3DSA:3.90.550.10 4 237 7.9E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases MSIP34_RS13790 330e4a1d4b4c07caf33069972e620f37 1199 Pfam PF05359 Domain of Unknown Function (DUF748) 146 283 6.1E-20 T 23-04-2016 IPR008023 Protein of unknown function DUF748 MSIP34_RS13790 330e4a1d4b4c07caf33069972e620f37 1199 Pfam PF05359 Domain of Unknown Function (DUF748) 796 942 1.8E-36 T 23-04-2016 IPR008023 Protein of unknown function DUF748 MSIP34_RS13790 330e4a1d4b4c07caf33069972e620f37 1199 Pfam PF05359 Domain of Unknown Function (DUF748) 563 712 1.2E-28 T 23-04-2016 IPR008023 Protein of unknown function DUF748 MSIP34_RS13790 330e4a1d4b4c07caf33069972e620f37 1199 Gene3D G3DSA:3.30.1330.60 1009 1053 2.2E-7 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS13790 330e4a1d4b4c07caf33069972e620f37 1199 Gene3D G3DSA:3.30.1330.60 1144 1175 2.2E-7 T 23-04-2016 IPR006665 OmpA-like domain MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 PANTHER PTHR22769:SF28 1 145 8.3E-22 T 23-04-2016 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 Gene3D G3DSA:3.90.79.10 4 150 1.2E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 SUPERFAMILY SSF55811 4 149 1.62E-22 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 PANTHER PTHR22769 1 145 8.3E-22 T 23-04-2016 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 Pfam PF00293 NUDIX domain 7 142 2.2E-13 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 PRINTS PR01404 DATP pyrophosphohydrolase signature 4 21 4.3E-9 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 PRINTS PR01404 DATP pyrophosphohydrolase signature 131 144 4.3E-9 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 MSIP34_RS12315 7250b3f88cfd811e46c42984fd63dd04 155 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 4.3E-9 T 23-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 MSIP34_RS09410 5182d272548c676304fcd06e563e2206 315 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 30 310 2.7E-81 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 MSIP34_RS09410 5182d272548c676304fcd06e563e2206 315 PANTHER PTHR30425 2 315 8.4E-144 T 23-04-2016 MSIP34_RS09410 5182d272548c676304fcd06e563e2206 315 SUPERFAMILY SSF161098 39 305 6.45E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09410 5182d272548c676304fcd06e563e2206 315 PANTHER PTHR30425:SF3 2 315 8.4E-144 T 23-04-2016 MSIP34_RS09410 5182d272548c676304fcd06e563e2206 315 Gene3D G3DSA:1.10.3720.10 86 312 1.8E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09410 5182d272548c676304fcd06e563e2206 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 312 2.3E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09275 d8f06641cc3716d2a9dd64e8fbb75cfe 300 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 189 282 7.3E-19 T 23-04-2016 IPR026392 Exosortase/Archaeosortase domain MSIP34_RS09275 d8f06641cc3716d2a9dd64e8fbb75cfe 300 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 25 280 9.6E-57 T 23-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- MSIP34_RS09275 d8f06641cc3716d2a9dd64e8fbb75cfe 300 TIGRFAM TIGR02602 8TM_EpsH: exosortase 42 279 4.4E-34 T 23-04-2016 IPR013426 Exosortase, EpsH MSIP34_RS09275 d8f06641cc3716d2a9dd64e8fbb75cfe 300 TIGRFAM TIGR03113 exosortase_2: exosortase B 20 286 2.2E-108 T 23-04-2016 IPR017544 Exosortase 2 MSIP34_RS04255 5fe052cdd2f08c207d85d63504f8d605 160 PANTHER PTHR30455:SF2 2 156 9.0E-66 T 23-04-2016 MSIP34_RS04255 5fe052cdd2f08c207d85d63504f8d605 160 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 81.439 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MSIP34_RS04255 5fe052cdd2f08c207d85d63504f8d605 160 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.5E-59 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 MSIP34_RS04255 5fe052cdd2f08c207d85d63504f8d605 160 Pfam PF03477 ATP cone domain 50 136 4.6E-13 T 23-04-2016 IPR005144 ATP-cone domain MSIP34_RS04255 5fe052cdd2f08c207d85d63504f8d605 160 PANTHER PTHR30455 2 156 9.0E-66 T 23-04-2016 MSIP34_RS11995 c108f297c827130e830870676eae6446 196 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 194 20.302 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 MSIP34_RS11995 c108f297c827130e830870676eae6446 196 PANTHER PTHR30309:SF0 1 190 2.5E-67 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 MSIP34_RS11995 c108f297c827130e830870676eae6446 196 PANTHER PTHR30309 1 190 2.5E-67 T 23-04-2016 MSIP34_RS11995 c108f297c827130e830870676eae6446 196 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 191 1.3E-58 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 MSIP34_RS11995 c108f297c827130e830870676eae6446 196 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 185 1.9E-52 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 MSIP34_RS11995 c108f297c827130e830870676eae6446 196 SMART SM01207 9 186 1.3E-89 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 113 318 1.8E-33 T 23-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 Gene3D G3DSA:3.90.15.10 118 248 3.2E-39 T 23-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 SUPERFAMILY SSF56349 109 354 1.39E-70 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 SUPERFAMILY SSF55869 53 114 3.92E-22 T 23-04-2016 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 153 172 2.0E-7 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 262 276 2.0E-7 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 197 213 2.0E-7 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 176 190 2.0E-7 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 MSIP34_RS02085 3a3bb2254c51c5fdcf2d01e1c195cab0 374 Gene3D G3DSA:1.20.120.380 263 356 1.3E-29 T 23-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 MSIP34_RS11175 ecaefab3d5cefc3e9862875a94b3e0ca 102 PANTHER PTHR34606 32 101 8.4E-17 T 23-04-2016 MSIP34_RS11175 ecaefab3d5cefc3e9862875a94b3e0ca 102 SMART SM00749 38 101 1.2E-4 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria MSIP34_RS11175 ecaefab3d5cefc3e9862875a94b3e0ca 102 Pfam PF04972 BON domain 33 101 5.3E-19 T 23-04-2016 IPR007055 BON domain MSIP34_RS13460 f3c0a9b95c3661de6475e65361f875b8 546 PANTHER PTHR23513 2 433 1.9E-138 T 23-04-2016 MSIP34_RS13460 f3c0a9b95c3661de6475e65361f875b8 546 SUPERFAMILY SSF103473 19 405 1.96E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS13460 f3c0a9b95c3661de6475e65361f875b8 546 Pfam PF05977 Transmembrane secretion effector 11 529 1.3E-170 T 23-04-2016 IPR010290 Transmembrane secretion effector MSIP34_RS13460 f3c0a9b95c3661de6475e65361f875b8 546 PANTHER PTHR23513:SF7 2 433 1.9E-138 T 23-04-2016 MSIP34_RS13460 f3c0a9b95c3661de6475e65361f875b8 546 Gene3D G3DSA:1.20.1250.20 238 405 4.6E-16 T 23-04-2016 MSIP34_RS13460 f3c0a9b95c3661de6475e65361f875b8 546 Gene3D G3DSA:1.20.1250.20 16 202 1.2E-20 T 23-04-2016 MSIP34_RS11710 df61b0678fe39b8e820ad6def6b15f35 506 Pfam PF07396 Phosphate-selective porin O and P 109 506 4.5E-40 T 23-04-2016 IPR010870 Phosphate-selective porin O/P MSIP34_RS11710 df61b0678fe39b8e820ad6def6b15f35 506 Gene3D G3DSA:2.40.160.10 82 506 2.1E-106 T 23-04-2016 IPR023614 Porin domain MSIP34_RS11710 df61b0678fe39b8e820ad6def6b15f35 506 SUPERFAMILY SSF56935 423 506 7.87E-17 T 23-04-2016 MSIP34_RS11710 df61b0678fe39b8e820ad6def6b15f35 506 SUPERFAMILY SSF56935 103 393 7.87E-17 T 23-04-2016 MSIP34_RS04730 638e9a50c6eaa9f9d9569ff92694715d 650 SUPERFAMILY SSF56935 48 649 1.49E-87 T 23-04-2016 MSIP34_RS04730 638e9a50c6eaa9f9d9569ff92694715d 650 Gene3D G3DSA:2.40.170.20 168 649 4.3E-68 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04730 638e9a50c6eaa9f9d9569ff92694715d 650 Gene3D G3DSA:2.170.130.10 39 167 2.9E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04730 638e9a50c6eaa9f9d9569ff92694715d 650 PANTHER PTHR32552 1 649 1.4E-41 T 23-04-2016 MSIP34_RS04730 638e9a50c6eaa9f9d9569ff92694715d 650 Pfam PF00593 TonB dependent receptor 413 644 4.0E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS04730 638e9a50c6eaa9f9d9569ff92694715d 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 165 2.4E-15 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS01715 e84ff965e4c3c4357ad9276ac5ca7921 81 Gene3D G3DSA:3.40.30.10 3 79 2.8E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01715 e84ff965e4c3c4357ad9276ac5ca7921 81 PANTHER PTHR34386:SF2 1 80 2.9E-12 T 23-04-2016 MSIP34_RS01715 e84ff965e4c3c4357ad9276ac5ca7921 81 PANTHER PTHR34386 1 80 2.9E-12 T 23-04-2016 MSIP34_RS01715 e84ff965e4c3c4357ad9276ac5ca7921 81 SUPERFAMILY SSF52833 3 79 2.25E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01715 e84ff965e4c3c4357ad9276ac5ca7921 81 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 77 8.2E-14 T 23-04-2016 IPR008554 Glutaredoxin-like MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 SUPERFAMILY SSF56954 5 465 7.98E-83 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Gene3D G3DSA:2.20.200.10 313 347 4.1E-7 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Gene3D G3DSA:2.20.200.10 120 137 4.1E-7 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Gene3D G3DSA:1.20.1600.10 54 91 4.8E-69 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Gene3D G3DSA:1.20.1600.10 138 312 4.8E-69 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Gene3D G3DSA:1.20.1600.10 349 463 4.8E-69 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 462 7.0E-94 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 PANTHER PTHR30203 8 481 6.2E-66 T 23-04-2016 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Pfam PF02321 Outer membrane efflux protein 282 460 4.6E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS09865 fc08c8b0cc2fdba6fe6c8b403e5aa322 482 Pfam PF02321 Outer membrane efflux protein 66 250 1.6E-15 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 Gene3D G3DSA:3.30.1150.10 163 255 7.6E-11 T 23-04-2016 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 172 193 3.2E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 111 121 3.2E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 PRINTS PR01374 Gram-negative bacterial tonB protein signature 193 211 3.2E-6 T 23-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 179 253 1.3E-13 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 177 254 1.2E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS08920 5f195a42a9e5b4c1dce07f3d9b736916 256 SUPERFAMILY SSF74653 171 252 6.15E-19 T 23-04-2016 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 SMART SM00283 583 830 4.9E-82 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 646 829 3.0E-55 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 Gene3D G3DSA:1.10.287.950 598 802 2.2E-56 T 23-04-2016 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 PANTHER PTHR32089 143 249 1.5E-118 T 23-04-2016 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 PANTHER PTHR32089 565 833 1.5E-118 T 23-04-2016 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 SUPERFAMILY SSF58104 603 833 2.75E-63 T 23-04-2016 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 183 2.5E-20 T 23-04-2016 IPR024478 4HB MCP domain MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 SMART SM00304 259 312 0.1 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 SMART SM00304 582 635 31.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 SMART SM00304 439 492 87.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 SMART SM00304 345 402 6.9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 PANTHER PTHR32089:SF63 143 249 1.5E-118 T 23-04-2016 MSIP34_RS11070 ec8444196bf7118ed8cff7130a869051 850 PANTHER PTHR32089:SF63 565 833 1.5E-118 T 23-04-2016 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 Gene3D G3DSA:3.40.50.1360 3 140 1.3E-51 T 23-04-2016 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 PANTHER PTHR11934 4 217 1.6E-76 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 SUPERFAMILY SSF100950 2 144 3.84E-40 T 23-04-2016 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 Gene3D G3DSA:3.30.70.260 141 203 6.2E-19 T 23-04-2016 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 218 1.0E-64 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 SUPERFAMILY SSF75445 129 205 4.32E-20 T 23-04-2016 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 223 28.35 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS05805 c8a28cbb99b4f300e4369619b1a0167a 225 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 217 3.2E-51 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 SUPERFAMILY SSF53335 13 242 4.53E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 PANTHER PTHR10108:SF864 5 243 1.3E-144 T 23-04-2016 MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 PANTHER PTHR10108 5 243 1.3E-144 T 23-04-2016 MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 Gene3D G3DSA:3.40.50.150 20 244 5.1E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 243 1.3E-76 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 243 1.0E-87 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 MSIP34_RS10085 0ee2f1de0006c8146608d9305b1b8f3f 245 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 243 36.659 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 MSIP34_RS07395 c59078ed11f01b0b342a65f25bad0cd4 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 275 1.2E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS07395 c59078ed11f01b0b342a65f25bad0cd4 278 SUPERFAMILY SSF161098 69 257 2.22E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS07395 c59078ed11f01b0b342a65f25bad0cd4 278 Gene3D G3DSA:1.10.3720.10 65 272 3.4E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS07395 c59078ed11f01b0b342a65f25bad0cd4 278 PANTHER PTHR30465 5 276 2.9E-122 T 23-04-2016 MSIP34_RS07395 c59078ed11f01b0b342a65f25bad0cd4 278 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 51 3.3E-11 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain MSIP34_RS07395 c59078ed11f01b0b342a65f25bad0cd4 278 PANTHER PTHR30465:SF2 5 276 2.9E-122 T 23-04-2016 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PANTHER PTHR12534 3 239 2.9E-112 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 Gene3D G3DSA:1.10.287.610 99 151 4.6E-23 T 23-04-2016 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PRINTS PR00395 Ribosomal protein S2 signature 174 185 1.1E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PRINTS PR00395 Ribosomal protein S2 signature 86 103 1.1E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PRINTS PR00395 Ribosomal protein S2 signature 195 209 1.1E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PRINTS PR00395 Ribosomal protein S2 signature 157 174 1.1E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PRINTS PR00395 Ribosomal protein S2 signature 5 23 1.1E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 PRINTS PR00395 Ribosomal protein S2 signature 36 45 1.1E-34 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 SUPERFAMILY SSF52313 5 237 9.68E-93 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 Gene3D G3DSA:3.40.50.10490 22 98 3.4E-62 T 23-04-2016 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 Gene3D G3DSA:3.40.50.10490 157 244 3.4E-62 T 23-04-2016 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 Pfam PF00318 Ribosomal protein S2 8 223 1.1E-91 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 3.8E-99 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 40.498 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 MSIP34_RS07170 4d4a3d26e33ff96c6b6eb5a1348dee41 249 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 157 181 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 MSIP34_RS09625 26993a66a2ef2313980b210ad055ba3e 276 PIRSF PIRSF037318 9 270 4.0E-90 T 23-04-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 MSIP34_RS09625 26993a66a2ef2313980b210ad055ba3e 276 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 26 236 7.8E-43 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 MSIP34_RS09625 26993a66a2ef2313980b210ad055ba3e 276 SUPERFAMILY SSF56112 41 247 8.17E-7 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 2.7E-18 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.1E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.1E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 SUPERFAMILY SSF46689 1 76 1.33E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 SUPERFAMILY SSF48498 87 194 3.2E-6 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 87 202 4.6E-10 T 23-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 Gene3D G3DSA:1.10.357.10 2 200 2.5E-35 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 MSIP34_RS08605 596ce262b66fa1346bc4183809cead1e 211 PANTHER PTHR30055 1 202 6.6E-25 T 23-04-2016 MSIP34_RS07270 c601939d7ae9f24270ae0110abae8a8b 389 Gene3D G3DSA:3.90.1150.10 260 386 2.1E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 MSIP34_RS07270 c601939d7ae9f24270ae0110abae8a8b 389 PANTHER PTHR11808 9 388 4.4E-101 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07270 c601939d7ae9f24270ae0110abae8a8b 389 Gene3D G3DSA:3.40.640.10 32 256 6.1E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 MSIP34_RS07270 c601939d7ae9f24270ae0110abae8a8b 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 25 383 6.5E-78 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07270 c601939d7ae9f24270ae0110abae8a8b 389 PIRSF PIRSF001434 2 386 3.3E-102 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 MSIP34_RS07270 c601939d7ae9f24270ae0110abae8a8b 389 SUPERFAMILY SSF53383 31 384 2.45E-83 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase MSIP34_RS08075 e6602ff5e626b7c79f20b28b74f5cfa0 120 Pfam PF00072 Response regulator receiver domain 5 114 2.3E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08075 e6602ff5e626b7c79f20b28b74f5cfa0 120 Gene3D G3DSA:3.40.50.2300 2 117 3.7E-28 T 23-04-2016 MSIP34_RS08075 e6602ff5e626b7c79f20b28b74f5cfa0 120 SMART SM00448 3 115 2.7E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS08075 e6602ff5e626b7c79f20b28b74f5cfa0 120 PANTHER PTHR26402 3 116 1.1E-23 T 23-04-2016 MSIP34_RS08075 e6602ff5e626b7c79f20b28b74f5cfa0 120 SUPERFAMILY SSF52172 3 118 2.28E-27 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS10245 9cdb6ccfe0aac19279236f780580fc61 248 Pfam PF04473 Transglutaminase-like domain 17 190 1.4E-9 T 23-04-2016 IPR007562 Transglutaminase-like domain MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 415 446 3.7E-5 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 PANTHER PTHR23083 30 212 2.6E-34 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Gene3D G3DSA:3.40.50.2000 414 476 8.1E-11 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SUPERFAMILY SSF48439 32 211 6.8E-26 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SMART SM00028 53 86 10.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SMART SM00028 155 187 0.02 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SMART SM00028 121 154 0.092 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SMART SM00028 87 120 5.3E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SMART SM00028 19 52 32.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 SUPERFAMILY SSF53756 242 479 2.42E-18 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Pfam PF13432 Tetratricopeptide repeat 159 207 4.1E-6 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Pfam PF13432 Tetratricopeptide repeat 93 154 6.7E-10 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Pfam PF13432 Tetratricopeptide repeat 24 87 0.0069 T 23-04-2016 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Gene3D G3DSA:1.25.40.10 22 137 1.7E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS00740 16c760ae96160ec45d0194705d15ea3c 500 Gene3D G3DSA:1.25.40.10 138 213 4.1E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04045 a8dddf4fb51f2143cab6124fb09ace27 105 SUPERFAMILY SSF63592 1 98 1.83E-35 T 23-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 MSIP34_RS04045 a8dddf4fb51f2143cab6124fb09ace27 105 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 6.8E-43 T 23-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 MSIP34_RS04045 a8dddf4fb51f2143cab6124fb09ace27 105 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 24.524 T 23-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 MSIP34_RS04045 a8dddf4fb51f2143cab6124fb09ace27 105 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 10 97 2.0E-35 T 23-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 MSIP34_RS05075 a064bb172b00c1b56fba7b146fa41cb7 170 Pfam PF11454 Protein of unknown function (DUF3016) 30 163 3.5E-44 T 23-04-2016 IPR021557 Protein of unknown function DUF3016 MSIP34_RS01770 da757f072ae11d48889099996f8819df 845 Pfam PF14403 Circularly permuted ATP-grasp type 2 82 476 3.0E-152 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 MSIP34_RS01770 da757f072ae11d48889099996f8819df 845 SUPERFAMILY SSF56059 49 220 1.2E-19 T 23-04-2016 MSIP34_RS01770 da757f072ae11d48889099996f8819df 845 SUPERFAMILY SSF56059 343 436 1.2E-19 T 23-04-2016 MSIP34_RS01770 da757f072ae11d48889099996f8819df 845 PANTHER PTHR34595 5 797 7.2E-250 T 23-04-2016 MSIP34_RS01770 da757f072ae11d48889099996f8819df 845 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 526 837 2.0E-59 T 23-04-2016 IPR007296 Domain of unknown function DUF403 MSIP34_RS01770 da757f072ae11d48889099996f8819df 845 PANTHER PTHR34595:SF1 5 797 7.2E-250 T 23-04-2016 MSIP34_RS00425 7cb1fcb9273b78df9cbb334612666a6c 104 SUPERFAMILY SSF52833 17 102 3.75E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS00425 7cb1fcb9273b78df9cbb334612666a6c 104 Pfam PF00085 Thioredoxin 12 98 3.3E-12 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 MSIP34_RS00425 7cb1fcb9273b78df9cbb334612666a6c 104 Gene3D G3DSA:3.40.30.10 14 102 1.1E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS10975 1010fea6bd683115b54d73c7fb859767 258 SMART SM00228 171 244 6.3E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS10975 1010fea6bd683115b54d73c7fb859767 258 Gene3D G3DSA:2.30.42.10 183 257 1.8E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS10975 1010fea6bd683115b54d73c7fb859767 258 Pfam PF13180 PDZ domain 183 252 5.5E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS10975 1010fea6bd683115b54d73c7fb859767 258 SUPERFAMILY SSF50156 186 257 7.36E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 MSIP34_RS07365 852c104cf52d6bd18b10d1be26c7e87f 154 PANTHER PTHR10642 8 144 6.7E-59 T 23-04-2016 MSIP34_RS07365 852c104cf52d6bd18b10d1be26c7e87f 154 Hamap MF_00042 Ribonuclease H [rnhA]. 5 154 32.701 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 MSIP34_RS07365 852c104cf52d6bd18b10d1be26c7e87f 154 SUPERFAMILY SSF53098 6 144 1.26E-57 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS07365 852c104cf52d6bd18b10d1be26c7e87f 154 Pfam PF00075 RNase H 8 144 2.1E-49 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 MSIP34_RS07365 852c104cf52d6bd18b10d1be26c7e87f 154 Gene3D G3DSA:3.30.420.10 6 147 4.3E-61 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 Gene3D G3DSA:3.40.50.1000 74 215 3.4E-39 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 SUPERFAMILY SSF56784 5 215 5.12E-53 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 1.8E-35 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 Gene3D G3DSA:1.10.150.240 33 73 1.8E-6 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 PANTHER PTHR18901:SF40 1 215 2.0E-53 T 23-04-2016 MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 180 9.5E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 MSIP34_RS06455 0a5bdc32a038187790d83feccbe8bd64 219 PANTHER PTHR18901 1 215 2.0E-53 T 23-04-2016 MSIP34_RS10715 70d5a4124516a85de7943c6b3b9b23e5 236 PANTHER PTHR30399 3 235 2.2E-47 T 23-04-2016 MSIP34_RS10715 70d5a4124516a85de7943c6b3b9b23e5 236 Gene3D G3DSA:3.30.2010.10 138 205 7.1E-4 T 23-04-2016 MSIP34_RS10715 70d5a4124516a85de7943c6b3b9b23e5 236 Pfam PF01863 Protein of unknown function DUF45 23 227 4.5E-60 T 23-04-2016 IPR002725 Protein of unknown function DUF45 MSIP34_RS08790 5b6253a00cc5f676f70ee7a1e4869a26 169 Pfam PF08239 Bacterial SH3 domain 31 73 2.3E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 1.1E-50 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 PANTHER PTHR21012 2 125 3.0E-65 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 71.939 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 PIRSF PIRSF006246 1 130 1.6E-51 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 PANTHER PTHR21012:SF0 2 125 3.0E-65 T 23-04-2016 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 Pfam PF02261 Aspartate decarboxylase 1 114 2.1E-50 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 SUPERFAMILY SSF50692 1 121 7.7E-49 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 Gene3D G3DSA:2.40.40.20 1 124 6.9E-55 T 23-04-2016 MSIP34_RS10920 10f79a959f33129bbeb21405b36aa832 130 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 5.0E-52 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 MSIP34_RS09515 c9cff19a1516a59663c728e4fbbe7177 281 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 2 127 27.092 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE MSIP34_RS09515 c9cff19a1516a59663c728e4fbbe7177 281 Pfam PF04355 SmpA / OmlA family 34 101 1.5E-22 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 MSIP34_RS09515 c9cff19a1516a59663c728e4fbbe7177 281 PANTHER PTHR37482 2 159 1.3E-27 T 23-04-2016 MSIP34_RS09515 c9cff19a1516a59663c728e4fbbe7177 281 PANTHER PTHR37482:SF1 2 159 1.3E-27 T 23-04-2016 MSIP34_RS06690 f156df25d925468b27973de77889d142 345 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 318 342 0.0015 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS06690 f156df25d925468b27973de77889d142 345 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 70 305 5.8E-61 T 23-04-2016 IPR026588 Choice-of-anchor A domain MSIP34_RS06690 f156df25d925468b27973de77889d142 345 Pfam PF07589 PEP-CTERM motif 317 342 7.0E-6 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS03530 10a9d11eae4c496a6e02d63d65072421 207 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 109 201 2.3E-20 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 MSIP34_RS03530 10a9d11eae4c496a6e02d63d65072421 207 SMART SM00702 16 201 5.3E-23 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 MSIP34_RS03530 10a9d11eae4c496a6e02d63d65072421 207 PANTHER PTHR12907:SF14 7 207 5.2E-56 T 23-04-2016 MSIP34_RS03530 10a9d11eae4c496a6e02d63d65072421 207 SUPERFAMILY SSF51197 10 156 5.95E-5 T 23-04-2016 MSIP34_RS03530 10a9d11eae4c496a6e02d63d65072421 207 PANTHER PTHR12907 7 207 5.2E-56 T 23-04-2016 MSIP34_RS07155 2f2baf89fcf0323a3faf291b5c50a5c9 185 PANTHER PTHR20982 1 185 1.2E-77 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 MSIP34_RS07155 2f2baf89fcf0323a3faf291b5c50a5c9 185 Pfam PF01765 Ribosome recycling factor 20 183 6.4E-61 T 23-04-2016 IPR023584 Ribosome recycling factor domain MSIP34_RS07155 2f2baf89fcf0323a3faf291b5c50a5c9 185 SUPERFAMILY SSF55194 1 185 7.46E-71 T 23-04-2016 IPR023584 Ribosome recycling factor domain MSIP34_RS07155 2f2baf89fcf0323a3faf291b5c50a5c9 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.0E-69 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 MSIP34_RS07155 2f2baf89fcf0323a3faf291b5c50a5c9 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.374 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 MSIP34_RS07155 2f2baf89fcf0323a3faf291b5c50a5c9 185 Gene3D G3DSA:1.10.132.20 67 185 2.3E-44 T 23-04-2016 IPR023584 Ribosome recycling factor domain MSIP34_RS13035 7bef295005b0f69d9a204a20f7fc94b8 188 SUPERFAMILY SSF54523 9 132 3.06E-15 T 23-04-2016 MSIP34_RS13035 7bef295005b0f69d9a204a20f7fc94b8 188 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 9.0E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS13035 7bef295005b0f69d9a204a20f7fc94b8 188 Gene3D G3DSA:3.30.700.10 9 67 9.0E-9 T 23-04-2016 MSIP34_RS13035 7bef295005b0f69d9a204a20f7fc94b8 188 Pfam PF12019 Type II transport protein GspH 44 158 6.6E-13 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 MSIP34_RS13035 7bef295005b0f69d9a204a20f7fc94b8 188 Pfam PF13633 Prokaryotic N-terminal methylation site 8 32 3.1E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS12265 e4d589590562a7adb16922cb4e08158e 268 PANTHER PTHR12905 1 227 1.6E-12 T 23-04-2016 MSIP34_RS12265 e4d589590562a7adb16922cb4e08158e 268 Gene3D G3DSA:3.60.21.10 4 237 3.9E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS12265 e4d589590562a7adb16922cb4e08158e 268 SUPERFAMILY SSF56300 1 237 4.98E-43 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like MSIP34_RS12265 e4d589590562a7adb16922cb4e08158e 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 191 5.3E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 MSIP34_RS12265 e4d589590562a7adb16922cb4e08158e 268 PANTHER PTHR12905:SF17 1 227 1.6E-12 T 23-04-2016 MSIP34_RS03620 4a1b45ff76b28bbb718d7a8e16e3d1d1 228 PANTHER PTHR33620 7 228 1.2E-36 T 23-04-2016 MSIP34_RS03620 4a1b45ff76b28bbb718d7a8e16e3d1d1 228 PIRSF PIRSF009467 4 228 6.7E-64 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MSIP34_RS03620 4a1b45ff76b28bbb718d7a8e16e3d1d1 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 7 228 31.545 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MSIP34_RS03620 4a1b45ff76b28bbb718d7a8e16e3d1d1 228 Pfam PF01730 UreF 39 185 8.0E-39 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 PANTHER PTHR34182 2 110 7.0E-26 T 23-04-2016 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 Pfam PF03840 Preprotein translocase SecG subunit 5 73 6.3E-21 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.1E-37 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.1E-37 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.1E-37 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.1E-37 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MSIP34_RS03420 549501bfd3a8a91feb80db904afd14c9 116 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 4.0E-26 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 MSIP34_RS04435 8037629c5925ebbc853d2593c3bc5210 287 Pfam PF01882 Protein of unknown function DUF58 47 117 1.0E-4 T 23-04-2016 IPR002881 Domain of unknown function DUF58 MSIP34_RS04435 8037629c5925ebbc853d2593c3bc5210 287 PANTHER PTHR33608 16 286 8.3E-18 T 23-04-2016 MSIP34_RS04435 8037629c5925ebbc853d2593c3bc5210 287 SUPERFAMILY SSF53300 72 183 1.66E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 294 2.0E-88 T 23-04-2016 MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 Gene3D G3DSA:3.40.50.150 106 286 3.1E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 PANTHER PTHR18895:SF69 16 279 1.2E-86 T 23-04-2016 MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 288 2.4E-69 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 PIRSF PIRSF000401 1 295 1.5E-89 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 PANTHER PTHR18895 16 279 1.2E-86 T 23-04-2016 MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 SUPERFAMILY SSF53335 87 293 1.34E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS00110 e7962de12f2a698a09a9e90c4df3e688 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 294 31.024 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 SUPERFAMILY SSF54611 5 148 4.14E-52 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 151 33.225 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 Pfam PF02556 Preprotein translocase subunit SecB 11 150 2.3E-55 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 12 148 1.4E-53 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 Gene3D G3DSA:3.10.420.10 9 156 4.4E-58 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 2.3E-34 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 2.3E-34 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 2.3E-34 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 2.3E-34 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 PANTHER PTHR36918:SF1 1 159 7.2E-55 T 23-04-2016 MSIP34_RS02820 39c17a18bdc2c21cb15d4e2ba77db683 160 PANTHER PTHR36918 1 159 7.2E-55 T 23-04-2016 MSIP34_RS12720 075c535597ae41759ab8bb06bbca3d2f 179 SMART SM00986 8 169 3.2E-10 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS12720 075c535597ae41759ab8bb06bbca3d2f 179 SUPERFAMILY SSF52141 7 171 6.21E-35 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS12720 075c535597ae41759ab8bb06bbca3d2f 179 Gene3D G3DSA:3.40.470.10 7 173 1.2E-34 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS12720 075c535597ae41759ab8bb06bbca3d2f 179 Pfam PF03167 Uracil DNA glycosylase superfamily 12 165 1.0E-11 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like MSIP34_RS12720 075c535597ae41759ab8bb06bbca3d2f 179 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 165 1.4E-47 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase MSIP34_RS12720 075c535597ae41759ab8bb06bbca3d2f 179 SMART SM00987 8 169 3.2E-10 T 23-04-2016 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 3.5E-32 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.9E-24 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.9E-24 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.9E-24 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 PANTHER PTHR34040:SF2 1 89 6.8E-37 T 23-04-2016 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 PIRSF PIRSF004669 1 89 1.5E-34 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 PANTHER PTHR34040 1 89 6.8E-37 T 23-04-2016 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 3.8E-33 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 MSIP34_RS03920 99eaf63fdde31d03108723eaa0d2af01 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 7 84 2.2E-22 T 23-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 SUPERFAMILY SSF63380 3 97 5.02E-21 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 Pfam PF00970 Oxidoreductase FAD-binding domain 30 91 1.1E-4 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 Gene3D G3DSA:2.40.30.10 3 92 2.4E-22 T 23-04-2016 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 SUPERFAMILY SSF52343 103 247 2.23E-35 T 23-04-2016 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 PANTHER PTHR19370 4 235 2.7E-67 T 23-04-2016 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 4.9E-17 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 Gene3D G3DSA:3.40.50.80 96 247 5.3E-43 T 23-04-2016 MSIP34_RS06955 0dff3df386edaa6e221591e9d0e90032 247 PANTHER PTHR19370:SF98 4 235 2.7E-67 T 23-04-2016 MSIP34_RS12750 19cc7c8f059b17b0c86b51b3b2e0a2d0 158 PANTHER PTHR37484 1 158 6.2E-26 T 23-04-2016 MSIP34_RS12750 19cc7c8f059b17b0c86b51b3b2e0a2d0 158 Pfam PF04093 rod shape-determining protein MreD 8 145 3.4E-17 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 MSIP34_RS12750 19cc7c8f059b17b0c86b51b3b2e0a2d0 158 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 146 1.1E-32 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 MSIP34_RS12750 19cc7c8f059b17b0c86b51b3b2e0a2d0 158 PIRSF PIRSF018472 1 154 3.1E-43 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 Gene3D G3DSA:2.40.230.10 157 390 4.1E-57 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 Pfam PF02253 Phospholipase A1 171 388 1.2E-36 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 PANTHER PTHR40457 172 390 9.2E-14 T 23-04-2016 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 SUPERFAMILY SSF56931 152 389 1.22E-55 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 PRINTS PR01486 Bacterial phospholipase A1 protein signature 299 317 2.8E-11 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 187 2.8E-11 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 PRINTS PR01486 Bacterial phospholipase A1 protein signature 360 380 2.8E-11 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS06685 0bf3cddfcb91a9c16200f8e4d2ab5a68 390 PRINTS PR01486 Bacterial phospholipase A1 protein signature 247 261 2.8E-11 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 MSIP34_RS11120 4b9efea6c43363e58b10b6f09df83e02 415 Pfam PF07995 Glucose / Sorbosone dehydrogenase 133 409 1.0E-58 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 MSIP34_RS11120 4b9efea6c43363e58b10b6f09df83e02 415 PANTHER PTHR19328 149 343 1.3E-17 T 23-04-2016 MSIP34_RS11120 4b9efea6c43363e58b10b6f09df83e02 415 SUPERFAMILY SSF50952 216 404 1.7E-16 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 MSIP34_RS11120 4b9efea6c43363e58b10b6f09df83e02 415 SUPERFAMILY SSF50952 149 178 1.7E-16 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 MSIP34_RS11120 4b9efea6c43363e58b10b6f09df83e02 415 Gene3D G3DSA:2.120.10.30 109 408 1.9E-42 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like MSIP34_RS00525 7d9ced6fbeb176b6a4f47dea1f0837a8 186 Pfam PF02397 Bacterial sugar transferase 2 179 2.6E-49 T 23-04-2016 IPR003362 Bacterial sugar transferase MSIP34_RS00525 7d9ced6fbeb176b6a4f47dea1f0837a8 186 PANTHER PTHR30576 1 186 2.3E-68 T 23-04-2016 MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 PANTHER PTHR23502 16 415 2.3E-101 T 23-04-2016 MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 Pfam PF07690 Major Facilitator Superfamily 21 357 2.1E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 SUPERFAMILY SSF103473 4 401 1.18E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 379 2.5E-75 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 PANTHER PTHR23502:SF19 16 415 2.3E-101 T 23-04-2016 MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 Gene3D G3DSA:1.20.1250.20 211 401 1.2E-11 T 23-04-2016 MSIP34_RS00060 ec6f94c25825e10813bed3261157def9 418 Gene3D G3DSA:1.20.1250.20 18 198 3.6E-27 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 Gene3D G3DSA:2.170.130.10 26 165 1.4E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 162 2.8E-12 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 PANTHER PTHR32552 264 759 4.2E-57 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 PANTHER PTHR32552 20 229 4.2E-57 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 PANTHER PTHR32552:SF0 264 759 4.2E-57 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 PANTHER PTHR32552:SF0 20 229 4.2E-57 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 SUPERFAMILY SSF56935 24 229 3.26E-91 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 SUPERFAMILY SSF56935 267 759 3.26E-91 T 23-04-2016 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 Pfam PF00593 TonB dependent receptor 505 757 2.0E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS02730 747449c428cd492a67a88089d877597a 759 Gene3D G3DSA:2.40.170.20 166 757 2.4E-72 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 MSIP34_RS06885 87d8b46ceb53c4bcf5626b99bee41a72 315 Gene3D G3DSA:3.40.630.10 11 228 1.9E-26 T 23-04-2016 MSIP34_RS06885 87d8b46ceb53c4bcf5626b99bee41a72 315 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 13 112 5.2E-14 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 MSIP34_RS06885 87d8b46ceb53c4bcf5626b99bee41a72 315 SUPERFAMILY SSF53187 185 312 8.6E-56 T 23-04-2016 MSIP34_RS06885 87d8b46ceb53c4bcf5626b99bee41a72 315 SUPERFAMILY SSF53187 9 156 8.6E-56 T 23-04-2016 MSIP34_RS09195 c796b3ab8d7e1b9497f50524b2801c35 214 PANTHER PTHR21666 39 176 3.5E-29 T 23-04-2016 MSIP34_RS09195 c796b3ab8d7e1b9497f50524b2801c35 214 Gene3D G3DSA:1.10.530.10 42 178 1.5E-42 T 23-04-2016 MSIP34_RS09195 c796b3ab8d7e1b9497f50524b2801c35 214 SUPERFAMILY SSF53955 51 180 2.5E-38 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS09195 c796b3ab8d7e1b9497f50524b2801c35 214 Pfam PF01464 Transglycosylase SLT domain 59 156 7.2E-22 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 PANTHER PTHR31566 232 414 1.1E-38 T 23-04-2016 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 PANTHER PTHR31566 1 211 1.1E-38 T 23-04-2016 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 PANTHER PTHR31566 517 637 1.1E-38 T 23-04-2016 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 PANTHER PTHR31566:SF0 232 414 1.1E-38 T 23-04-2016 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 PANTHER PTHR31566:SF0 1 211 1.1E-38 T 23-04-2016 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 PANTHER PTHR31566:SF0 517 637 1.1E-38 T 23-04-2016 MSIP34_RS01310 b2fe1e1ce6bf81155e0c50ac1cc7e771 637 Pfam PF05140 ResB-like family 1 624 2.2E-153 T 23-04-2016 IPR007816 ResB-like domain MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 PANTHER PTHR21666 162 298 4.5E-31 T 23-04-2016 MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 SUPERFAMILY SSF53955 173 303 5.63E-40 T 23-04-2016 IPR023346 Lysozyme-like domain MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 Gene3D G3DSA:1.10.530.10 181 308 3.1E-40 T 23-04-2016 MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 SUPERFAMILY SSF81901 73 129 1.2E-8 T 23-04-2016 MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 Pfam PF01464 Transglycosylase SLT domain 190 281 1.8E-22 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 SMART SM00671 87 122 1.6E-8 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS02775 3e8a2c5b72cdd7b5c42049ab8f7d620d 320 Gene3D G3DSA:1.25.40.10 73 130 2.2E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11865 7ce074bbe83768eaabefb6cd3dac3f29 1452 SUPERFAMILY SSF52540 187 339 8.89E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS03480 9b0e92a8796eaf34f832ad8316116ec0 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 4.1E-23 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MSIP34_RS03480 9b0e92a8796eaf34f832ad8316116ec0 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.504 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MSIP34_RS03480 9b0e92a8796eaf34f832ad8316116ec0 101 PANTHER PTHR11434 4 101 1.5E-39 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 MSIP34_RS10070 923546aac9ef05a2d4a063174e006f16 68 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 5 47 2.9E-18 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type MSIP34_RS10070 923546aac9ef05a2d4a063174e006f16 68 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 5.1E-13 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type MSIP34_RS11590 765393a71f4793a7e8ab84da5a60d5c9 242 SUPERFAMILY SSF56235 2 239 7.73E-34 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS11590 765393a71f4793a7e8ab84da5a60d5c9 242 Gene3D G3DSA:3.60.20.10 2 217 1.4E-16 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal MSIP34_RS11590 765393a71f4793a7e8ab84da5a60d5c9 242 PIRSF PIRSF009120 1 242 1.2E-110 T 23-04-2016 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 MSIP34_RS11590 765393a71f4793a7e8ab84da5a60d5c9 242 Pfam PF00227 Proteasome subunit 4 184 8.6E-7 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 MSIP34_RS05870 64e3b989f3c170cf9cf83c166694a19c 170 PANTHER PTHR11717 3 156 1.9E-38 T 23-04-2016 MSIP34_RS05870 64e3b989f3c170cf9cf83c166694a19c 170 SUPERFAMILY SSF52788 5 144 1.22E-42 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily MSIP34_RS05870 64e3b989f3c170cf9cf83c166694a19c 170 SMART SM00226 6 144 3.2E-44 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily MSIP34_RS05870 64e3b989f3c170cf9cf83c166694a19c 170 Gene3D G3DSA:3.40.50.270 4 142 9.2E-43 T 23-04-2016 MSIP34_RS05870 64e3b989f3c170cf9cf83c166694a19c 170 PANTHER PTHR11717:SF18 3 156 1.9E-38 T 23-04-2016 MSIP34_RS05870 64e3b989f3c170cf9cf83c166694a19c 170 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 141 2.8E-21 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily MSIP34_RS06655 c905405631687bcf14897bc9031803f5 183 Pfam PF11086 Protein of unknown function (DUF2878) 4 159 1.4E-43 T 23-04-2016 IPR021306 Protein of unknown function DUF2878 MSIP34_RS13415 05ec455b0333d033bc2ae6327559e4bd 267 Gene3D G3DSA:3.20.20.450 24 241 4.2E-46 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13415 05ec455b0333d033bc2ae6327559e4bd 267 SUPERFAMILY SSF141868 24 241 2.22E-55 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13415 05ec455b0333d033bc2ae6327559e4bd 267 SMART SM00052 1 244 6.0E-19 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13415 05ec455b0333d033bc2ae6327559e4bd 267 Pfam PF00563 EAL domain 24 241 9.1E-47 T 23-04-2016 IPR001633 EAL domain MSIP34_RS13415 05ec455b0333d033bc2ae6327559e4bd 267 PANTHER PTHR33121:SF15 23 267 6.2E-83 T 23-04-2016 MSIP34_RS13415 05ec455b0333d033bc2ae6327559e4bd 267 PANTHER PTHR33121 23 267 6.2E-83 T 23-04-2016 MSIP34_RS04910 7f95b6a47a1e192292121706729837da 200 Pfam PF00857 Isochorismatase family 6 191 6.1E-43 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS04910 7f95b6a47a1e192292121706729837da 200 PANTHER PTHR11080:SF34 1 199 3.3E-80 T 23-04-2016 MSIP34_RS04910 7f95b6a47a1e192292121706729837da 200 PANTHER PTHR11080 1 199 3.3E-80 T 23-04-2016 MSIP34_RS04910 7f95b6a47a1e192292121706729837da 200 SUPERFAMILY SSF52499 2 198 3.27E-48 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS04910 7f95b6a47a1e192292121706729837da 200 Gene3D G3DSA:3.40.50.850 2 199 8.7E-53 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 MSIP34_RS10260 e07673086bb339c23fe086917781d1f9 598 Pfam PF13475 Domain of unknown function (DUF4116) 114 150 1.6E-6 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS10260 e07673086bb339c23fe086917781d1f9 598 Pfam PF13475 Domain of unknown function (DUF4116) 251 289 2.9E-7 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 PANTHER PTHR10799 126 132 1.8E-18 T 23-04-2016 MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 Gene3D G3DSA:3.30.70.270 147 312 1.4E-43 T 23-04-2016 MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 PANTHER PTHR10799:SF750 126 132 1.8E-18 T 23-04-2016 MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 PANTHER PTHR10799:SF750 186 307 1.8E-18 T 23-04-2016 MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 308 5.3E-34 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 SUPERFAMILY SSF55073 150 311 1.88E-38 T 23-04-2016 IPR029787 Nucleotide cyclase MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 SMART SM00267 134 310 4.1E-32 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 PANTHER PTHR10799 186 307 1.8E-18 T 23-04-2016 MSIP34_RS02455 155373b89c255213e17866f35b1e5797 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 147 306 1.4E-32 T 23-04-2016 IPR000160 GGDEF domain MSIP34_RS03575 5e73e18f1324e2e4af76c2ccf6dd06a8 305 PANTHER PTHR11795:SF349 12 304 6.6E-95 T 23-04-2016 MSIP34_RS03575 5e73e18f1324e2e4af76c2ccf6dd06a8 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 290 1.9E-45 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 MSIP34_RS03575 5e73e18f1324e2e4af76c2ccf6dd06a8 305 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 15 304 2.3E-121 T 23-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type MSIP34_RS03575 5e73e18f1324e2e4af76c2ccf6dd06a8 305 PANTHER PTHR11795 12 304 6.6E-95 T 23-04-2016 MSIP34_RS14640 11ae4baeb4bd2fd8b6081cf86a783698 622 Pfam PF04233 Phage Mu protein F like protein 150 261 1.3E-10 T 23-04-2016 IPR006528 Phage head morphogenesis domain MSIP34_RS14640 11ae4baeb4bd2fd8b6081cf86a783698 622 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 160 265 4.1E-15 T 23-04-2016 IPR006528 Phage head morphogenesis domain MSIP34_RS14640 11ae4baeb4bd2fd8b6081cf86a783698 622 SUPERFAMILY SSF55486 525 594 5.49E-6 T 23-04-2016 MSIP34_RS14640 11ae4baeb4bd2fd8b6081cf86a783698 622 Gene3D G3DSA:3.40.390.10 530 595 1.6E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 MSIP34_RS13155 62224ac967142924c5d5d9a36444360e 213 Pfam PF12261 Thermostable hemolysin 43 210 2.6E-61 T 23-04-2016 IPR022050 Thermostable hemolysin MSIP34_RS14155 b5babcd5b351cb2d3b556f4307f5f18a 260 SUPERFAMILY SSF52540 1 252 7.89E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14155 b5babcd5b351cb2d3b556f4307f5f18a 260 Gene3D G3DSA:3.40.50.300 2 252 5.7E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS14155 b5babcd5b351cb2d3b556f4307f5f18a 260 PANTHER PTHR13696 1 260 6.9E-92 T 23-04-2016 MSIP34_RS14155 b5babcd5b351cb2d3b556f4307f5f18a 260 Pfam PF13614 AAA domain 1 177 6.1E-65 T 23-04-2016 IPR025669 AAA domain MSIP34_RS14155 b5babcd5b351cb2d3b556f4307f5f18a 260 PANTHER PTHR13696:SF52 1 260 6.9E-92 T 23-04-2016 MSIP34_RS04825 0756c168b8db2179dbc7479575b88be8 256 PANTHER PTHR35005 1 251 1.6E-45 T 23-04-2016 MSIP34_RS04825 0756c168b8db2179dbc7479575b88be8 256 PANTHER PTHR35005:SF1 1 251 1.6E-45 T 23-04-2016 MSIP34_RS04825 0756c168b8db2179dbc7479575b88be8 256 SUPERFAMILY SSF102215 1 237 1.06E-62 T 23-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 MSIP34_RS04825 0756c168b8db2179dbc7479575b88be8 256 Gene3D G3DSA:3.40.50.10310 2 238 8.3E-67 T 23-04-2016 IPR024087 Creatininase-like domain KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 MSIP34_RS04825 0756c168b8db2179dbc7479575b88be8 256 Pfam PF02633 Creatinine amidohydrolase 7 236 2.8E-56 T 23-04-2016 IPR003785 Creatininase/formamide hydrolase KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|KEGG: 00740+3.5.1.102|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-6167|UniPathway: UPA00071|UniPathway: UPA00275 MSIP34_RS05590 cdba58d96f6ce24277fb500e787588e6 237 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 23 222 8.1E-63 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 MSIP34_RS05590 cdba58d96f6ce24277fb500e787588e6 237 SUPERFAMILY SSF100950 17 230 5.5E-61 T 23-04-2016 MSIP34_RS05590 cdba58d96f6ce24277fb500e787588e6 237 Gene3D G3DSA:3.40.50.1360 17 229 3.3E-67 T 23-04-2016 MSIP34_RS05590 cdba58d96f6ce24277fb500e787588e6 237 PANTHER PTHR11054 21 232 5.7E-58 T 23-04-2016 MSIP34_RS05590 cdba58d96f6ce24277fb500e787588e6 237 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 21 212 4.0E-54 T 23-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 MSIP34_RS00035 67a2bd6336957c6bf5a9308f1c4e5512 127 TIGRFAM TIGR00494 crcB: protein CrcB 7 119 9.7E-31 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MSIP34_RS00035 67a2bd6336957c6bf5a9308f1c4e5512 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 1.5E-22 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MSIP34_RS00035 67a2bd6336957c6bf5a9308f1c4e5512 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.15 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 MSIP34_RS00035 67a2bd6336957c6bf5a9308f1c4e5512 127 PANTHER PTHR28259 1 127 9.2E-33 T 23-04-2016 MSIP34_RS02795 612d774086025bf97386f72b3b776aac 403 SUPERFAMILY SSF53756 17 379 1.07E-75 T 23-04-2016 MSIP34_RS02795 612d774086025bf97386f72b3b776aac 403 Gene3D G3DSA:3.40.50.2000 183 361 1.8E-26 T 23-04-2016 MSIP34_RS02795 612d774086025bf97386f72b3b776aac 403 PANTHER PTHR12526 16 393 1.6E-96 T 23-04-2016 MSIP34_RS02795 612d774086025bf97386f72b3b776aac 403 Pfam PF13439 Glycosyltransferase Family 4 29 192 6.0E-23 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS02795 612d774086025bf97386f72b3b776aac 403 PANTHER PTHR12526:SF363 16 393 1.6E-96 T 23-04-2016 MSIP34_RS02795 612d774086025bf97386f72b3b776aac 403 Pfam PF00534 Glycosyl transferases group 1 204 360 6.7E-27 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS01290 fc0eb7c39f73f3915ff54185722d1ecd 385 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 91 313 3.0E-51 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA MSIP34_RS01290 fc0eb7c39f73f3915ff54185722d1ecd 385 SUPERFAMILY SSF53335 23 377 6.0E-95 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS01290 fc0eb7c39f73f3915ff54185722d1ecd 385 PANTHER PTHR12049 1 365 1.8E-66 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA MSIP34_RS01030 d3b4576fd9452b43ed16f20e47805c21 118 Pfam PF09685 Domain of unknown function (DUF4870) 19 117 8.6E-30 T 23-04-2016 IPR019109 Protein of unknown function DUF4870 MSIP34_RS09980 660381dafb871496ad1a3b501a60f257 209 Pfam PF04403 Paraquat-inducible protein A 46 197 4.9E-40 T 23-04-2016 IPR007498 Paraquat-inducible protein A MSIP34_RS09980 660381dafb871496ad1a3b501a60f257 209 PANTHER PTHR30462:SF3 6 203 1.3E-21 T 23-04-2016 MSIP34_RS09980 660381dafb871496ad1a3b501a60f257 209 PANTHER PTHR30462 6 203 1.3E-21 T 23-04-2016 MSIP34_RS03475 39c23419ff223a8ea6cb8a89c7635156 213 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 165 5.0E-40 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 MSIP34_RS03475 39c23419ff223a8ea6cb8a89c7635156 213 PANTHER PTHR33269:SF1 7 196 4.8E-60 T 23-04-2016 MSIP34_RS03475 39c23419ff223a8ea6cb8a89c7635156 213 PANTHER PTHR33269 7 196 4.8E-60 T 23-04-2016 MSIP34_RS06740 f301122688e0f5ca9df8d529c0aa11c7 324 PANTHER PTHR19372:SF1 52 319 2.1E-133 T 23-04-2016 MSIP34_RS06740 f301122688e0f5ca9df8d529c0aa11c7 324 Gene3D G3DSA:3.90.420.10 70 323 5.0E-68 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 MSIP34_RS06740 f301122688e0f5ca9df8d529c0aa11c7 324 PANTHER PTHR19372 52 319 2.1E-133 T 23-04-2016 MSIP34_RS06740 f301122688e0f5ca9df8d529c0aa11c7 324 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 6 324 59.185 T 23-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 MSIP34_RS06740 f301122688e0f5ca9df8d529c0aa11c7 324 Pfam PF00174 Oxidoreductase molybdopterin binding domain 103 259 1.4E-27 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 MSIP34_RS06740 f301122688e0f5ca9df8d529c0aa11c7 324 SUPERFAMILY SSF56524 71 320 2.75E-91 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 MSIP34_RS03595 bec30f232a111c6e3aba43b210baab96 289 Hamap MF_01384 Urease accessory protein UreD [ureD]. 20 273 27.286 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MSIP34_RS03595 bec30f232a111c6e3aba43b210baab96 289 PANTHER PTHR33643 7 286 1.7E-32 T 23-04-2016 MSIP34_RS03595 bec30f232a111c6e3aba43b210baab96 289 Pfam PF01774 UreD urease accessory protein 64 262 1.2E-43 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 MSIP34_RS03595 bec30f232a111c6e3aba43b210baab96 289 PANTHER PTHR33643:SF1 7 286 1.7E-32 T 23-04-2016 MSIP34_RS00795 b958cafd0b31a660a670b881db891b98 142 Pfam PF01618 MotA/TolQ/ExbB proton channel family 44 141 5.5E-9 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS12245 8a396bc5bda6534f6a1eeee2cf15c42a 625 SUPERFAMILY SSF81901 111 341 9.02E-10 T 23-04-2016 MSIP34_RS12245 8a396bc5bda6534f6a1eeee2cf15c42a 625 Gene3D G3DSA:1.25.40.10 86 228 1.2E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS10215 61cbce8cabbf8a02885481b9fd9855a9 251 Gene3D G3DSA:3.80.10.10 44 145 7.5E-5 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like MSIP34_RS13065 0cf0de574e24b22c240afe5c6b9aebf3 308 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 38.974 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 MSIP34_RS13065 0cf0de574e24b22c240afe5c6b9aebf3 308 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 282 1.3E-103 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 MSIP34_RS13065 0cf0de574e24b22c240afe5c6b9aebf3 308 Pfam PF02401 LytB protein 3 279 5.4E-95 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 MSIP34_RS13065 0cf0de574e24b22c240afe5c6b9aebf3 308 PANTHER PTHR30426 1 306 4.9E-160 T 23-04-2016 MSIP34_RS09305 9a3e1ef9424510991d3f662baf059982 169 SMART SM00100 27 149 1.3E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS09305 9a3e1ef9424510991d3f662baf059982 169 Gene3D G3DSA:2.60.120.10 15 157 3.3E-24 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS09305 9a3e1ef9424510991d3f662baf059982 169 SUPERFAMILY SSF51206 14 148 8.25E-25 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like MSIP34_RS09305 9a3e1ef9424510991d3f662baf059982 169 Pfam PF00027 Cyclic nucleotide-binding domain 53 131 1.1E-12 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain MSIP34_RS06750 3a48cc52376e18fff368d0c183273f76 167 PANTHER PTHR33452:SF7 2 165 2.5E-46 T 23-04-2016 MSIP34_RS06750 3a48cc52376e18fff368d0c183273f76 167 PANTHER PTHR33452 2 165 2.5E-46 T 23-04-2016 MSIP34_RS06750 3a48cc52376e18fff368d0c183273f76 167 Pfam PF07681 DoxX 25 107 2.4E-16 T 23-04-2016 IPR032808 DoxX family MSIP34_RS07900 016e5fd20fde0b0480e7697cf727c98a 40 Pfam PF08085 Entericidin EcnA/B family 19 38 1.8E-11 T 23-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 MSIP34_RS00615 3b09919b094bd1fac9c6fb571936f430 341 Gene3D G3DSA:3.40.190.10 91 246 8.4E-23 T 23-04-2016 MSIP34_RS00615 3b09919b094bd1fac9c6fb571936f430 341 SUPERFAMILY SSF53850 67 271 1.9E-17 T 23-04-2016 MSIP34_RS03580 7fa0fca23252107d513292503a11c795 388 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 338 8.2E-32 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 MSIP34_RS03580 7fa0fca23252107d513292503a11c795 388 PANTHER PTHR30482 113 374 1.1E-97 T 23-04-2016 MSIP34_RS03580 7fa0fca23252107d513292503a11c795 388 PANTHER PTHR30482 23 82 1.1E-97 T 23-04-2016 MSIP34_RS03580 7fa0fca23252107d513292503a11c795 388 PANTHER PTHR30482:SF4 113 374 1.1E-97 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC MSIP34_RS03580 7fa0fca23252107d513292503a11c795 388 PANTHER PTHR30482:SF4 23 82 1.1E-97 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC MSIP34_RS03580 7fa0fca23252107d513292503a11c795 388 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 31 348 4.2E-134 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC MSIP34_RS02735 f18bc6884725a8d6f412c1c508ab5765 420 SUPERFAMILY SSF50939 55 305 5.89E-14 T 23-04-2016 IPR011040 Sialidases MSIP34_RS02735 f18bc6884725a8d6f412c1c508ab5765 420 Gene3D G3DSA:2.120.10.10 311 386 1.3E-4 T 23-04-2016 IPR011040 Sialidases MSIP34_RS02735 f18bc6884725a8d6f412c1c508ab5765 420 Gene3D G3DSA:2.120.10.10 48 310 1.0E-13 T 23-04-2016 IPR011040 Sialidases MSIP34_RS02735 f18bc6884725a8d6f412c1c508ab5765 420 SUPERFAMILY SSF50939 282 388 7.85E-5 T 23-04-2016 IPR011040 Sialidases MSIP34_RS10970 b5a12f98d9a6a75ceb9b133c995cf393 661 PIRSF PIRSF015380 3 661 6.2E-177 T 23-04-2016 IPR011385 Site-specific recombinase Gcr MSIP34_RS10970 b5a12f98d9a6a75ceb9b133c995cf393 661 Pfam PF10136 Site-specific recombinase 16 647 8.7E-249 T 23-04-2016 IPR011385 Site-specific recombinase Gcr MSIP34_RS10970 b5a12f98d9a6a75ceb9b133c995cf393 661 Gene3D G3DSA:1.20.1080.10 330 447 2.2E-4 T 23-04-2016 IPR023271 Aquaporin-like MSIP34_RS03980 0f3b6fe4f2ec46afaef438db810752bd 142 PIRSF PIRSF002889 1 142 6.5E-39 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 MSIP34_RS03980 0f3b6fe4f2ec46afaef438db810752bd 142 Pfam PF00460 Flagella basal body rod protein 10 38 4.1E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 MSIP34_RS03980 0f3b6fe4f2ec46afaef438db810752bd 142 PANTHER PTHR30435:SF12 1 142 1.4E-36 T 23-04-2016 MSIP34_RS03980 0f3b6fe4f2ec46afaef438db810752bd 142 PANTHER PTHR30435 1 142 1.4E-36 T 23-04-2016 MSIP34_RS03980 0f3b6fe4f2ec46afaef438db810752bd 142 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 140 3.0E-34 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 MSIP34_RS13705 6fb4692bd8f8e0250cfa95db034224bc 63 Pfam PF01679 Proteolipid membrane potential modulator 1 47 1.3E-6 T 23-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 MSIP34_RS09155 ef734ae7a54a666c92dedd04f4640d7d 492 PANTHER PTHR30250:SF0 1 457 9.6E-52 T 23-04-2016 MSIP34_RS09155 ef734ae7a54a666c92dedd04f4640d7d 492 PANTHER PTHR30250 1 457 9.6E-52 T 23-04-2016 MSIP34_RS09155 ef734ae7a54a666c92dedd04f4640d7d 492 Pfam PF13440 Polysaccharide biosynthesis protein 29 318 9.2E-73 T 23-04-2016 MSIP34_RS02395 f83fb0b0fad9176db4399539cc2e1b6d 315 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 213 1.2E-20 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 MSIP34_RS02395 f83fb0b0fad9176db4399539cc2e1b6d 315 SUPERFAMILY SSF51735 1 261 2.24E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS02395 f83fb0b0fad9176db4399539cc2e1b6d 315 PANTHER PTHR12126 6 297 2.2E-71 T 23-04-2016 MSIP34_RS02395 f83fb0b0fad9176db4399539cc2e1b6d 315 Gene3D G3DSA:3.40.50.720 4 224 1.5E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS07230 e0db0dddc3b10cdf425c7bea315a3cb6 131 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 7 110 1.2E-29 T 23-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV MSIP34_RS07230 e0db0dddc3b10cdf425c7bea315a3cb6 131 PANTHER PTHR37309 6 125 1.0E-30 T 23-04-2016 MSIP34_RS07230 e0db0dddc3b10cdf425c7bea315a3cb6 131 PANTHER PTHR37309:SF1 6 125 1.0E-30 T 23-04-2016 MSIP34_RS12565 906c5b490ea0a61fa71641faab979f5b 410 Gene3D G3DSA:2.40.160.10 34 394 3.4E-20 T 23-04-2016 IPR023614 Porin domain MSIP34_RS12565 906c5b490ea0a61fa71641faab979f5b 410 SUPERFAMILY SSF56935 30 410 2.44E-32 T 23-04-2016 MSIP34_RS11350 427cb1ae63d3226b1fff6bfc4efa1ba0 149 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 149 27.75 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS11350 427cb1ae63d3226b1fff6bfc4efa1ba0 149 Gene3D G3DSA:3.40.50.960 7 147 5.8E-54 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS11350 427cb1ae63d3226b1fff6bfc4efa1ba0 149 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 145 2.7E-40 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS11350 427cb1ae63d3226b1fff6bfc4efa1ba0 149 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 146 3.3E-48 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS11350 427cb1ae63d3226b1fff6bfc4efa1ba0 149 PANTHER PTHR21058 8 149 2.2E-55 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS11350 427cb1ae63d3226b1fff6bfc4efa1ba0 149 SUPERFAMILY SSF52121 8 149 1.44E-51 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 SMART SM00564 180 217 28.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 SMART SM00564 521 552 0.025 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 SMART SM00564 81 115 23.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 SMART SM00564 134 166 0.22 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 SUPERFAMILY SSF50998 31 237 1.2E-154 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 SUPERFAMILY SSF50998 272 614 1.2E-154 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 PANTHER PTHR32303:SF6 270 392 5.3E-181 T 23-04-2016 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 PANTHER PTHR32303:SF6 425 592 5.3E-181 T 23-04-2016 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 PANTHER PTHR32303:SF6 1 219 5.3E-181 T 23-04-2016 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 Pfam PF13360 PQQ-like domain 68 222 3.1E-11 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 295 316 - T 23-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 Gene3D G3DSA:2.140.10.10 277 592 7.2E-148 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 Gene3D G3DSA:2.140.10.10 30 242 7.2E-148 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 Pfam PF01011 PQQ enzyme repeat 527 558 1.5E-4 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 PANTHER PTHR32303 270 392 5.3E-181 T 23-04-2016 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 PANTHER PTHR32303 425 592 5.3E-181 T 23-04-2016 MSIP34_RS12805 cce5e96abca72f4361061a8f641f7567 623 PANTHER PTHR32303 1 219 5.3E-181 T 23-04-2016 MSIP34_RS08960 e50f4eaed6d391ceba750081e78f0bb1 443 SUPERFAMILY SSF103473 29 433 4.19E-68 T 23-04-2016 IPR020846 Major facilitator superfamily domain MSIP34_RS08960 e50f4eaed6d391ceba750081e78f0bb1 443 Gene3D G3DSA:1.20.1250.20 231 439 3.5E-22 T 23-04-2016 MSIP34_RS08960 e50f4eaed6d391ceba750081e78f0bb1 443 Pfam PF07690 Major Facilitator Superfamily 36 373 2.6E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 MSIP34_RS08960 e50f4eaed6d391ceba750081e78f0bb1 443 PANTHER PTHR23505 1 435 3.6E-64 T 23-04-2016 MSIP34_RS08960 e50f4eaed6d391ceba750081e78f0bb1 443 Gene3D G3DSA:1.20.1250.20 31 205 5.5E-33 T 23-04-2016 MSIP34_RS09010 4eb83a19c5dd0d25b96898c6d1c31988 123 Pfam PF16137 Domain of unknown function (DUF4845) 28 113 5.7E-25 T 23-04-2016 IPR032314 Protein of unknown function DUF4845 MSIP34_RS00190 ec8cb365a7a4366486381f8c651732ad 285 Gene3D G3DSA:3.40.50.1820 3 281 6.6E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS00190 ec8cb365a7a4366486381f8c651732ad 285 SUPERFAMILY SSF53474 34 246 2.22E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS00190 ec8cb365a7a4366486381f8c651732ad 285 Pfam PF12740 Chlorophyllase enzyme 43 181 7.5E-9 T 23-04-2016 IPR017395 Chlorophyllase GO:0015996|GO:0047746 KEGG: 00860+3.1.1.14|MetaCyc: PWY-5098|MetaCyc: PWY-6927|MetaCyc: PWY-7164|UniPathway: UPA00674 MSIP34_RS00190 ec8cb365a7a4366486381f8c651732ad 285 PANTHER PTHR10272 36 239 5.9E-15 T 23-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 PANTHER PTHR35457:SF1 234 321 1.6E-53 T 23-04-2016 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 PANTHER PTHR35457:SF1 6 48 1.6E-53 T 23-04-2016 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 PANTHER PTHR35457:SF1 64 211 1.6E-53 T 23-04-2016 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 Pfam PF02628 Cytochrome oxidase assembly protein 9 319 1.6E-77 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 PANTHER PTHR35457 234 321 1.6E-53 T 23-04-2016 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 PANTHER PTHR35457 6 48 1.6E-53 T 23-04-2016 MSIP34_RS06155 edecf9a39afc4697f719b6f31c2ada4b 334 PANTHER PTHR35457 64 211 1.6E-53 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 PANTHER PTHR19375 65 248 1.1E-82 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 PANTHER PTHR19375 1 46 1.1E-82 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 PANTHER PTHR19375 278 410 1.1E-82 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 SUPERFAMILY SSF53067 1 181 2.2E-26 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 Gene3D G3DSA:3.30.420.40 3 198 2.1E-30 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 Pfam PF00012 Hsp70 protein 299 412 1.2E-6 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 Pfam PF00012 Hsp70 protein 108 239 1.1E-9 T 23-04-2016 IPR013126 Heat shock protein 70 family MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 SUPERFAMILY SSF53067 187 255 9.36E-33 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 SUPERFAMILY SSF53067 294 414 9.36E-33 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 PANTHER PTHR19375:SF182 65 248 1.1E-82 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 PANTHER PTHR19375:SF182 1 46 1.1E-82 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 PANTHER PTHR19375:SF182 278 410 1.1E-82 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 Gene3D G3DSA:3.90.640.10 296 341 7.7E-4 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 Gene3D G3DSA:3.30.420.40 342 390 9.8E-12 T 23-04-2016 MSIP34_RS13715 06d7050326e8064e6d7878f09720c09d 418 Gene3D G3DSA:3.30.420.40 199 278 9.8E-12 T 23-04-2016 MSIP34_RS06280 d2a4127439be84fee148bfcbe3f225f6 411 SUPERFAMILY SSF102114 45 181 9.68E-15 T 23-04-2016 MSIP34_RS06280 d2a4127439be84fee148bfcbe3f225f6 411 PANTHER PTHR21180:SF9 134 410 3.2E-116 T 23-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative MSIP34_RS06280 d2a4127439be84fee148bfcbe3f225f6 411 SUPERFAMILY SSF47781 307 380 1.63E-10 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 MSIP34_RS06280 d2a4127439be84fee148bfcbe3f225f6 411 PANTHER PTHR21180 134 410 3.2E-116 T 23-04-2016 MSIP34_RS06280 d2a4127439be84fee148bfcbe3f225f6 411 Gene3D G3DSA:3.80.30.20 64 264 3.7E-9 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe MSIP34_RS06280 d2a4127439be84fee148bfcbe3f225f6 411 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 393 9.7E-171 T 23-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 Gene3D G3DSA:3.40.30.10 1 90 2.6E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 PANTHER PTHR11260 1 198 4.1E-65 T 23-04-2016 MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 SUPERFAMILY SSF52833 1 101 3.23E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 184 7.0E-7 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 SUPERFAMILY SSF47616 73 197 4.41E-23 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 PANTHER PTHR11260:SF44 1 198 4.1E-65 T 23-04-2016 MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 72 5.8E-16 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 MSIP34_RS01475 c16a36e22e7c2a4e70f81cda400b6592 199 Gene3D G3DSA:1.20.1050.10 91 190 1.9E-16 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like MSIP34_RS09790 f82544a33ee6eadeed72507eae46f074 144 Pfam PF09980 Predicted membrane protein (DUF2214) 4 142 8.8E-43 T 23-04-2016 IPR018706 Protein of unknown function DUF2214, membrane MSIP34_RS06285 4ce6081837836ef0eb663ad235414afe 286 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 7 249 1.5E-66 T 23-04-2016 IPR023875 DNA metabolism protein, putative MSIP34_RS06285 4ce6081837836ef0eb663ad235414afe 286 PANTHER PTHR33693 154 278 1.0E-32 T 23-04-2016 MSIP34_RS06285 4ce6081837836ef0eb663ad235414afe 286 PANTHER PTHR33693:SF3 154 278 1.0E-32 T 23-04-2016 MSIP34_RS06285 4ce6081837836ef0eb663ad235414afe 286 Pfam PF13566 Domain of unknown function (DUF4130 91 248 6.5E-43 T 23-04-2016 IPR025404 Domain of unknown function DUF4130 MSIP34_RS04080 dab41126220c6b43f782f258191ef595 384 Pfam PF03929 PepSY-associated TM region 9 358 4.2E-52 T 23-04-2016 IPR005625 PepSY-associated TM protein MSIP34_RS04080 dab41126220c6b43f782f258191ef595 384 PANTHER PTHR34219:SF3 1 365 1.4E-84 T 23-04-2016 MSIP34_RS04080 dab41126220c6b43f782f258191ef595 384 PANTHER PTHR34219 1 365 1.4E-84 T 23-04-2016 MSIP34_RS04480 03d4b5c905a44cf8bcdfe1dd147f6954 175 Pfam PF03413 Peptidase propeptide and YPEB domain 31 89 8.5E-9 T 23-04-2016 IPR025711 PepSY domain MSIP34_RS04480 03d4b5c905a44cf8bcdfe1dd147f6954 175 Pfam PF03413 Peptidase propeptide and YPEB domain 106 165 4.8E-13 T 23-04-2016 IPR025711 PepSY domain MSIP34_RS12470 70138c1c3d22c61331a9aaf9ee299d02 268 Pfam PF07859 alpha/beta hydrolase fold 43 236 7.0E-51 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 MSIP34_RS12470 70138c1c3d22c61331a9aaf9ee299d02 268 PANTHER PTHR23024:SF24 41 237 2.6E-54 T 23-04-2016 MSIP34_RS12470 70138c1c3d22c61331a9aaf9ee299d02 268 PANTHER PTHR23024 41 237 2.6E-54 T 23-04-2016 MSIP34_RS12470 70138c1c3d22c61331a9aaf9ee299d02 268 SUPERFAMILY SSF53474 34 236 4.16E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS12470 70138c1c3d22c61331a9aaf9ee299d02 268 Gene3D G3DSA:3.40.50.1820 13 236 6.2E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS06230 20a34b0ae78ead2a629a117678b6e9fd 200 SUPERFAMILY SSF55469 1 196 2.75E-55 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS06230 20a34b0ae78ead2a629a117678b6e9fd 200 PANTHER PTHR23026:SF111 1 200 2.3E-57 T 23-04-2016 MSIP34_RS06230 20a34b0ae78ead2a629a117678b6e9fd 200 PANTHER PTHR23026 1 200 2.3E-57 T 23-04-2016 MSIP34_RS06230 20a34b0ae78ead2a629a117678b6e9fd 200 Pfam PF00881 Nitroreductase family 7 177 1.4E-36 T 23-04-2016 IPR029479 Nitroreductase MSIP34_RS06230 20a34b0ae78ead2a629a117678b6e9fd 200 Gene3D G3DSA:3.40.109.10 1 195 3.3E-59 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS11520 689a4c0fafd4eb4dbf3fc946ea477a04 73 PANTHER PTHR40613 1 71 5.9E-22 T 23-04-2016 MSIP34_RS11520 689a4c0fafd4eb4dbf3fc946ea477a04 73 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 67 1.2E-30 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor MSIP34_RS11520 689a4c0fafd4eb4dbf3fc946ea477a04 73 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 8.0E-23 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor MSIP34_RS11520 689a4c0fafd4eb4dbf3fc946ea477a04 73 PANTHER PTHR40613:SF1 1 71 5.9E-22 T 23-04-2016 MSIP34_RS05755 ac9f4a792638d124c783cc7599edf51a 77 Pfam PF04972 BON domain 14 71 1.6E-11 T 23-04-2016 IPR007055 BON domain MSIP34_RS03500 9743017f64e92dbf8155ccb905aa65ff 98 Pfam PF10993 Protein of unknown function (DUF2818) 4 94 3.8E-38 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane MSIP34_RS03500 9743017f64e92dbf8155ccb905aa65ff 98 PIRSF PIRSF019883 1 98 7.2E-33 T 23-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane MSIP34_RS00665 5cb13bc8698bd97a5e3310d91bceebe3 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 219 6.8E-29 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 MSIP34_RS00665 5cb13bc8698bd97a5e3310d91bceebe3 323 Gene3D G3DSA:3.40.50.720 3 307 6.4E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS00665 5cb13bc8698bd97a5e3310d91bceebe3 323 PANTHER PTHR10366:SF329 4 307 5.4E-97 T 23-04-2016 MSIP34_RS00665 5cb13bc8698bd97a5e3310d91bceebe3 323 PANTHER PTHR10366 4 307 5.4E-97 T 23-04-2016 MSIP34_RS00665 5cb13bc8698bd97a5e3310d91bceebe3 323 SUPERFAMILY SSF51735 3 310 1.27E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain MSIP34_RS05055 37ca036db49b9d38370502a4f319f1f6 138 SUPERFAMILY SSF47473 80 124 2.45E-6 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS05055 37ca036db49b9d38370502a4f319f1f6 138 ProSitePatterns PS00018 EF-hand calcium-binding domain. 88 100 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site MSIP34_RS05055 37ca036db49b9d38370502a4f319f1f6 138 Gene3D G3DSA:1.10.238.10 81 127 5.7E-5 T 23-04-2016 IPR011992 EF-hand domain pair MSIP34_RS10870 8e78a6f4c02bee6ef13159513e26f738 134 PANTHER PTHR30574 8 127 4.3E-35 T 23-04-2016 MSIP34_RS10870 8e78a6f4c02bee6ef13159513e26f738 134 PANTHER PTHR30574:SF1 8 127 4.3E-35 T 23-04-2016 MSIP34_RS13200 f3a2216a5e7e14c53c112d782f366c22 159 Pfam PF00190 Cupin 64 140 1.6E-6 T 23-04-2016 IPR006045 Cupin 1 GO:0045735 MSIP34_RS13200 f3a2216a5e7e14c53c112d782f366c22 159 SUPERFAMILY SSF51182 27 156 1.86E-22 T 23-04-2016 IPR011051 RmlC-like cupin domain MSIP34_RS13200 f3a2216a5e7e14c53c112d782f366c22 159 Gene3D G3DSA:2.60.120.10 25 145 1.2E-18 T 23-04-2016 IPR014710 RmlC-like jelly roll fold MSIP34_RS05295 7aef8c1d04b84f84db34a1c0187b6f00 119 SUPERFAMILY SSF141488 43 112 1.83E-6 T 23-04-2016 IPR018660 C-type lysozyme, inhibitor MSIP34_RS10255 1eebaf4971abfdb3166e2c40be28eae4 400 Pfam PF08401 Domain of unknown function (DUF1738) 27 183 2.9E-9 T 23-04-2016 IPR013610 Domain of unknown function DUF1738 MSIP34_RS12110 15c57d645f481637d86a6c7ff4e6c597 305 SUPERFAMILY SSF103481 44 141 3.14E-17 T 23-04-2016 MSIP34_RS12110 15c57d645f481637d86a6c7ff4e6c597 305 PANTHER PTHR22911 10 297 1.3E-50 T 23-04-2016 MSIP34_RS12110 15c57d645f481637d86a6c7ff4e6c597 305 SUPERFAMILY SSF103481 188 293 1.7E-17 T 23-04-2016 MSIP34_RS12110 15c57d645f481637d86a6c7ff4e6c597 305 Pfam PF00892 EamA-like transporter family 12 141 1.9E-26 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS12110 15c57d645f481637d86a6c7ff4e6c597 305 Pfam PF00892 EamA-like transporter family 152 288 1.1E-24 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 MSIP34_RS08735 6f323ed0bc2739bb78d4d724f9bd44cd 204 Gene3D G3DSA:3.40.50.2020 28 202 1.6E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS08735 6f323ed0bc2739bb78d4d724f9bd44cd 204 Pfam PF00156 Phosphoribosyl transferase domain 37 187 1.9E-23 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 MSIP34_RS08735 6f323ed0bc2739bb78d4d724f9bd44cd 204 PANTHER PTHR22573 36 201 1.7E-46 T 23-04-2016 MSIP34_RS08735 6f323ed0bc2739bb78d4d724f9bd44cd 204 PANTHER PTHR22573:SF56 36 201 1.7E-46 T 23-04-2016 MSIP34_RS08735 6f323ed0bc2739bb78d4d724f9bd44cd 204 SUPERFAMILY SSF53271 24 203 5.38E-47 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like MSIP34_RS05370 52cd7313ef2fcc55ce685aef9092bda6 167 Gene3D G3DSA:1.20.950.20 28 161 1.5E-4 T 23-04-2016 MSIP34_RS05370 52cd7313ef2fcc55ce685aef9092bda6 167 Pfam PF01292 Prokaryotic cytochrome b561 6 162 1.1E-16 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 MSIP34_RS05370 52cd7313ef2fcc55ce685aef9092bda6 167 SUPERFAMILY SSF81342 6 162 4.63E-22 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 MSIP34_RS13735 45bb662d7488d0d97c32c1f153a93a1f 522 PANTHER PTHR32057 1 522 3.0E-206 T 23-04-2016 MSIP34_RS13735 45bb662d7488d0d97c32c1f153a93a1f 522 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 21 487 4.3E-134 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 MSIP34_RS13735 45bb662d7488d0d97c32c1f153a93a1f 522 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 505 41.732 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 MSIP34_RS04420 362058d3679127a1225d39794cb9c1a8 178 Gene3D G3DSA:1.25.40.10 49 146 4.3E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS04420 362058d3679127a1225d39794cb9c1a8 178 SUPERFAMILY SSF48452 34 151 4.64E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS12225 bbf0323fded4d621a46d543afb225a84 371 PANTHER PTHR30188 37 365 5.3E-72 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 MSIP34_RS12225 bbf0323fded4d621a46d543afb225a84 371 PANTHER PTHR30188:SF3 37 365 5.3E-72 T 23-04-2016 MSIP34_RS12225 bbf0323fded4d621a46d543afb225a84 371 Pfam PF02405 Permease MlaE 154 364 8.5E-63 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 MSIP34_RS02210 8e362a8f22a0dfe3973507c051a4b755 119 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 20 116 9.8E-33 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 MSIP34_RS02210 8e362a8f22a0dfe3973507c051a4b755 119 SUPERFAMILY SSF54534 7 119 1.79E-39 T 23-04-2016 MSIP34_RS02210 8e362a8f22a0dfe3973507c051a4b755 119 Gene3D G3DSA:3.10.50.40 4 119 8.6E-45 T 23-04-2016 MSIP34_RS02210 8e362a8f22a0dfe3973507c051a4b755 119 PANTHER PTHR10516 8 119 4.1E-48 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type MSIP34_RS10665 5edcf0ea64010bb26fe8c30977e10a12 327 Gene3D G3DSA:3.40.50.300 103 306 3.4E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10665 5edcf0ea64010bb26fe8c30977e10a12 327 PANTHER PTHR30473 1 327 3.3E-157 T 23-04-2016 MSIP34_RS10665 5edcf0ea64010bb26fe8c30977e10a12 327 SUPERFAMILY SSF52540 82 280 1.41E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10665 5edcf0ea64010bb26fe8c30977e10a12 327 PANTHER PTHR30473:SF1 1 327 3.3E-157 T 23-04-2016 MSIP34_RS10665 5edcf0ea64010bb26fe8c30977e10a12 327 Pfam PF02562 PhoH-like protein 104 306 3.2E-92 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 MSIP34_RS03430 53e70c592fc2bbdcda80bee04f8c675f 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 117 1.6E-40 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 MSIP34_RS03430 53e70c592fc2bbdcda80bee04f8c675f 118 PANTHER PTHR11058 1 118 4.5E-66 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 MSIP34_RS03430 53e70c592fc2bbdcda80bee04f8c675f 118 PANTHER PTHR11058:SF10 1 118 4.5E-66 T 23-04-2016 MSIP34_RS03430 53e70c592fc2bbdcda80bee04f8c675f 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.601 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 MSIP34_RS05885 842d19c8fc08cf1fdd82174d74a832e7 162 PIRSF PIRSF034445 2 161 6.5E-23 T 23-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 MSIP34_RS05885 842d19c8fc08cf1fdd82174d74a832e7 162 Pfam PF13801 Heavy-metal resistance 17 146 1.2E-15 T 23-04-2016 IPR025961 Heavy-metal resistance protein MSIP34_RS05885 842d19c8fc08cf1fdd82174d74a832e7 162 PANTHER PTHR38102 6 153 2.2E-14 T 23-04-2016 MSIP34_RS13165 4a8f29f43f3accc0a02d7c3244e4527b 331 Gene3D G3DSA:2.40.160.10 72 173 9.6E-5 T 23-04-2016 IPR023614 Porin domain MSIP34_RS13165 4a8f29f43f3accc0a02d7c3244e4527b 331 SUPERFAMILY SSF56935 35 313 2.42E-15 T 23-04-2016 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 10 139 1.6E-40 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 PIRSF PIRSF004681 1 139 1.7E-48 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 Gene3D G3DSA:2.60.120.460 1 139 1.5E-53 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 PANTHER PTHR30615 8 139 7.5E-59 T 23-04-2016 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 SUPERFAMILY SSF111038 1 139 2.88E-47 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 1.4E-37 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS02785 bd9e09d54618264fa081b7526e119259 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 Gene3D G3DSA:3.40.50.1400 217 334 7.5E-34 T 23-04-2016 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 Pfam PF00762 Ferrochelatase 15 333 4.9E-114 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 TIGRFAM TIGR00109 hemH: ferrochelatase 14 334 5.2E-96 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 SUPERFAMILY SSF53800 14 345 5.1E-110 T 23-04-2016 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 ProSitePatterns PS00534 Ferrochelatase signature. 204 222 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 Hamap MF_00323 Ferrochelatase [hemH]. 14 335 37.173 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 PANTHER PTHR11108 14 335 2.8E-123 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 MSIP34_RS09550 9cb072d5b0e2c7a692e0ea7faf992877 369 Gene3D G3DSA:3.40.50.1400 14 216 1.6E-72 T 23-04-2016 MSIP34_RS12005 12ef671a0be8e980292be025b29249d6 350 TIGRFAM TIGR03790 TIGR03790: TIGR03790 family protein 37 326 4.0E-72 T 23-04-2016 IPR022265 Conserved hypothetical protein CHP03790 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 SUPERFAMILY SSF161098 257 294 5.23E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 SUPERFAMILY SSF161098 39 230 5.23E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 Gene3D G3DSA:1.10.3720.10 27 308 2.4E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 PANTHER PTHR30425:SF2 1 312 6.4E-138 T 23-04-2016 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 PANTHER PTHR30425 1 312 6.4E-138 T 23-04-2016 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 309 2.9E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS09415 efb53f076a260afb8fc7ec5c5c780902 312 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 27 307 2.9E-77 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 MSIP34_RS05110 9b9c0c6c6e745aa185d90a99e48255d1 60 Gene3D G3DSA:3.30.429.20 1 60 3.3E-19 T 23-04-2016 MSIP34_RS05110 9b9c0c6c6e745aa185d90a99e48255d1 60 Pfam PF01361 Tautomerase enzyme 2 58 3.9E-15 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 MSIP34_RS05110 9b9c0c6c6e745aa185d90a99e48255d1 60 SUPERFAMILY SSF55331 2 59 4.09E-18 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily MSIP34_RS05940 95ad746cf34bf20d2db8607951654279 190 Gene3D G3DSA:1.10.340.30 9 185 9.9E-75 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS05940 95ad746cf34bf20d2db8607951654279 190 PANTHER PTHR30037:SF4 9 185 4.8E-93 T 23-04-2016 MSIP34_RS05940 95ad746cf34bf20d2db8607951654279 190 SUPERFAMILY SSF48150 8 186 1.66E-70 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 MSIP34_RS05940 95ad746cf34bf20d2db8607951654279 190 PANTHER PTHR30037 9 185 4.8E-93 T 23-04-2016 MSIP34_RS05940 95ad746cf34bf20d2db8607951654279 190 Pfam PF03352 Methyladenine glycosylase 12 184 2.7E-73 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 MSIP34_RS00045 64ac4b327f9849a21d00f42ba78754b0 170 Pfam PF13441 YMGG-like Gly-zipper 67 107 3.7E-7 T 23-04-2016 IPR027367 YMGG-like Gly-zipper MSIP34_RS07710 dea154c3b4605fbcf812f579a370b677 182 Pfam PF03625 Domain of unknown function DUF302 85 145 2.1E-10 T 23-04-2016 IPR005180 Domain of unknown function DUF302 MSIP34_RS07710 dea154c3b4605fbcf812f579a370b677 182 SUPERFAMILY SSF103247 51 177 1.44E-20 T 23-04-2016 IPR005180 Domain of unknown function DUF302 MSIP34_RS07710 dea154c3b4605fbcf812f579a370b677 182 Gene3D G3DSA:3.30.310.70 55 177 2.6E-20 T 23-04-2016 IPR005180 Domain of unknown function DUF302 MSIP34_RS07320 11ec7e35a7ed3369837bfd3ab82c781d 102 Gene3D G3DSA:1.10.760.10 5 37 7.0E-4 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS07320 11ec7e35a7ed3369837bfd3ab82c781d 102 SUPERFAMILY SSF46626 2 94 1.8E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS07320 11ec7e35a7ed3369837bfd3ab82c781d 102 Gene3D G3DSA:1.10.760.10 38 94 9.5E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 SUPERFAMILY SSF52540 10 239 8.57E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 PANTHER PTHR24220 11 262 1.1E-117 T 23-04-2016 MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 PANTHER PTHR24220:SF361 11 262 1.1E-117 T 23-04-2016 MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 Gene3D G3DSA:3.40.50.300 7 227 1.1E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 SMART SM00382 38 221 1.9E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 Pfam PF00005 ABC transporter 29 171 3.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 MSIP34_RS01825 926d362b5546e95a01af097a7b830d38 268 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 29 259 6.9E-107 T 23-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 MSIP34_RS03705 ee7f58a98423f7fa4979b56679df42cf 136 PANTHER PTHR30204 11 92 1.5E-27 T 23-04-2016 MSIP34_RS03705 ee7f58a98423f7fa4979b56679df42cf 136 SUPERFAMILY SSF46955 17 97 1.33E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain MSIP34_RS03705 ee7f58a98423f7fa4979b56679df42cf 136 SMART SM00422 19 89 5.0E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MSIP34_RS03705 ee7f58a98423f7fa4979b56679df42cf 136 PANTHER PTHR30204:SF15 11 92 1.5E-27 T 23-04-2016 MSIP34_RS03705 ee7f58a98423f7fa4979b56679df42cf 136 Gene3D G3DSA:1.10.1660.10 16 87 1.7E-18 T 23-04-2016 MSIP34_RS03705 ee7f58a98423f7fa4979b56679df42cf 136 Pfam PF13411 MerR HTH family regulatory protein 19 87 3.5E-23 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 PANTHER PTHR11911 15 141 4.4E-35 T 23-04-2016 MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 SMART SM00116 14 61 0.028 T 23-04-2016 IPR000644 CBS domain MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 SMART SM00116 79 126 9.6E-11 T 23-04-2016 IPR000644 CBS domain MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 SUPERFAMILY SSF54631 4 140 2.15E-33 T 23-04-2016 MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 Gene3D G3DSA:3.10.580.10 4 127 4.9E-34 T 23-04-2016 MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 Pfam PF00571 CBS domain 15 60 1.3E-6 T 23-04-2016 IPR000644 CBS domain MSIP34_RS12125 0ec94211277e957b355b508311bf7709 142 Pfam PF00571 CBS domain 72 124 1.7E-15 T 23-04-2016 IPR000644 CBS domain MSIP34_RS07615 ec7be20011441eea132494cd14c82688 193 SUPERFAMILY SSF54211 27 190 4.55E-56 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold MSIP34_RS07615 ec7be20011441eea132494cd14c82688 193 Pfam PF08714 Formaldehyde-activating enzyme (Fae) 30 190 1.5E-64 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS07615 ec7be20011441eea132494cd14c82688 193 Gene3D G3DSA:3.30.230.60 26 191 2.2E-69 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS07615 ec7be20011441eea132494cd14c82688 193 PANTHER PTHR35039 45 189 3.0E-22 T 23-04-2016 MSIP34_RS07615 ec7be20011441eea132494cd14c82688 193 PANTHER PTHR35039:SF1 45 189 3.0E-22 T 23-04-2016 MSIP34_RS07615 ec7be20011441eea132494cd14c82688 193 TIGRFAM TIGR03126 one_C_fae: formaldehyde-activating enzyme 29 190 2.5E-62 T 23-04-2016 IPR014826 Formaldehyde-activating enzyme GO:0016051|GO:0016840 KEGG: 00030+4.1.2.43|KEGG: 00680+4.2.1.147+4.1.2.43|MetaCyc: PWY-1723|MetaCyc: PWY-1861|UniPathway: UPA00293 MSIP34_RS11195 ca4b584d5db3ff7484b039c3a43d43d5 268 PANTHER PTHR38034 5 267 2.4E-48 T 23-04-2016 MSIP34_RS11195 ca4b584d5db3ff7484b039c3a43d43d5 268 Pfam PF01578 Cytochrome C assembly protein 43 265 5.4E-33 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 MSIP34_RS11830 e59b706658a4aa77c13e84015a2e2515 331 Gene3D G3DSA:3.20.20.30 3 323 3.5E-92 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS11830 e59b706658a4aa77c13e84015a2e2515 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 2.0E-136 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 MSIP34_RS11830 e59b706658a4aa77c13e84015a2e2515 331 PANTHER PTHR30137:SF2 1 324 1.0E-140 T 23-04-2016 MSIP34_RS11830 e59b706658a4aa77c13e84015a2e2515 331 Pfam PF00296 Luciferase-like monooxygenase 5 296 2.1E-38 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS11830 e59b706658a4aa77c13e84015a2e2515 331 PANTHER PTHR30137 1 324 1.0E-140 T 23-04-2016 MSIP34_RS11830 e59b706658a4aa77c13e84015a2e2515 331 SUPERFAMILY SSF51679 4 323 9.54E-88 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 MSIP34_RS05375 48e7a1dca8192c6c63922bdc5251c053 230 Pfam PF16357 Putative PepSY_TM-like 20 219 5.2E-12 T 23-04-2016 IPR032307 Putative PepSY TM-like protein MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 PANTHER PTHR13847:SF214 12 410 1.5E-181 T 23-04-2016 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 SUPERFAMILY SSF51905 13 282 1.14E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 Gene3D G3DSA:3.50.50.60 14 90 1.3E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 Gene3D G3DSA:3.50.50.60 156 338 1.3E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 14 501 9.5E-234 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 15 499 5.0E-209 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 11 501 49.982 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 MSIP34_RS00050 9551a22e85200c7b8190593b2956f11d 503 PANTHER PTHR13847 12 410 1.5E-181 T 23-04-2016 MSIP34_RS09745 57feaa0e0de26999f82519c05e9ba93f 200 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 2 200 37.735 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS09745 57feaa0e0de26999f82519c05e9ba93f 200 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 8 200 5.6E-71 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS09745 57feaa0e0de26999f82519c05e9ba93f 200 Pfam PF00925 GTP cyclohydrolase II 6 176 1.4E-66 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS09745 57feaa0e0de26999f82519c05e9ba93f 200 PANTHER PTHR21327 4 200 1.3E-96 T 23-04-2016 MSIP34_RS09745 57feaa0e0de26999f82519c05e9ba93f 200 SUPERFAMILY SSF142695 3 178 1.96E-57 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 MSIP34_RS05705 41ffc7aa8a5d80dd0bc14c5271fb23fa 288 PANTHER PTHR40590 7 287 1.9E-12 T 23-04-2016 MSIP34_RS05705 41ffc7aa8a5d80dd0bc14c5271fb23fa 288 Pfam PF01963 TraB family 33 286 1.4E-48 T 23-04-2016 IPR002816 Pheromone shutdown, TraB MSIP34_RS05080 4cc495498356d92c93525791aa0c0bb0 211 SUPERFAMILY SSF88659 11 76 7.52E-5 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 6.2E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 Gene3D G3DSA:3.30.700.10 7 83 3.0E-4 T 23-04-2016 MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 5.8E-5 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 5.8E-5 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 SUPERFAMILY SSF54523 34 157 3.24E-15 T 23-04-2016 MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 2.2E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS04285 59d7502fa24b7bc2d7e0879acee14a88 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 SMART SM00418 19 97 9.0E-23 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 Pfam PF01022 Bacterial regulatory protein, arsR family 28 71 9.9E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 Gene3D G3DSA:1.10.10.10 7 101 3.9E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 PANTHER PTHR33154 4 100 1.0E-22 T 23-04-2016 MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 SUPERFAMILY SSF46785 12 101 4.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 1.9E-15 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 1.9E-15 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 51 1.9E-15 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS08050 593201596ffd3862c069a18c0e98e3d9 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 1.9E-15 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 MSIP34_RS06200 1b70208f0ec8695ab61e0e28a4432b62 196 Pfam PF06930 Protein of unknown function (DUF1282) 10 176 1.4E-19 T 23-04-2016 IPR009698 Protein of unknown function DUF1282 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 SUPERFAMILY SSF53927 6 147 5.69E-47 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 PANTHER PTHR11079 6 226 8.4E-67 T 23-04-2016 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 102 1.6E-20 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 Gene3D G3DSA:3.40.430.10 132 361 6.1E-73 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 PANTHER PTHR11079:SF10 6 226 8.4E-67 T 23-04-2016 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 PIRSF PIRSF006769 2 366 7.2E-132 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 91 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 Pfam PF01872 RibD C-terminal domain 150 357 1.8E-47 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 359 1.6E-121 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 Gene3D G3DSA:3.40.140.10 6 131 3.9E-34 T 23-04-2016 MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 SUPERFAMILY SSF53597 148 360 2.1E-56 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain MSIP34_RS04260 ad124950ea84e880f1c60a6d4e4e02f3 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 149 362 8.3E-59 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 MSIP34_RS09985 ff71d2be46f783f11f06af8d3121c5b6 283 Gene3D G3DSA:3.40.50.1820 123 259 4.0E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS09985 ff71d2be46f783f11f06af8d3121c5b6 283 SUPERFAMILY SSF53474 72 260 3.41E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS11510 42df41f0d64b13826cd8fa5e774e97a0 134 SUPERFAMILY SSF75620 4 96 1.61E-11 T 23-04-2016 MSIP34_RS11510 42df41f0d64b13826cd8fa5e774e97a0 134 Pfam PF00472 RF-1 domain 4 128 1.3E-24 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MSIP34_RS11510 42df41f0d64b13826cd8fa5e774e97a0 134 PANTHER PTHR11075 4 133 9.0E-33 T 23-04-2016 MSIP34_RS11510 42df41f0d64b13826cd8fa5e774e97a0 134 Gene3D G3DSA:3.30.160.200 3 102 1.6E-31 T 23-04-2016 MSIP34_RS11510 42df41f0d64b13826cd8fa5e774e97a0 134 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 17 33 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 MSIP34_RS06320 48a047e0ee721effe4cfa3b997f1beb6 303 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 30 263 1.4E-52 T 23-04-2016 IPR026588 Choice-of-anchor A domain MSIP34_RS02810 c5e72c7faa775cf1dd73567f5fcc192c 134 SMART SM00450 33 130 1.8E-27 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS02810 c5e72c7faa775cf1dd73567f5fcc192c 134 PANTHER PTHR12231:SF138 41 134 2.4E-22 T 23-04-2016 MSIP34_RS02810 c5e72c7faa775cf1dd73567f5fcc192c 134 Gene3D G3DSA:3.40.250.10 18 134 4.6E-35 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS02810 c5e72c7faa775cf1dd73567f5fcc192c 134 PANTHER PTHR12231 41 134 2.4E-22 T 23-04-2016 MSIP34_RS02810 c5e72c7faa775cf1dd73567f5fcc192c 134 Pfam PF00581 Rhodanese-like domain 34 126 4.2E-21 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS02810 c5e72c7faa775cf1dd73567f5fcc192c 134 SUPERFAMILY SSF52821 10 133 1.31E-36 T 23-04-2016 IPR001763 Rhodanese-like domain MSIP34_RS04700 cc5ffa5195f1caaacf38d4554d313a70 110 PANTHER PTHR30561 1 110 4.5E-53 T 23-04-2016 MSIP34_RS04700 cc5ffa5195f1caaacf38d4554d313a70 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 1.3E-27 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 MSIP34_RS04700 cc5ffa5195f1caaacf38d4554d313a70 110 SUPERFAMILY SSF103481 7 105 3.66E-20 T 23-04-2016 MSIP34_RS04700 cc5ffa5195f1caaacf38d4554d313a70 110 PANTHER PTHR30561:SF1 1 110 4.5E-53 T 23-04-2016 MSIP34_RS14245 cda94f6b93a6483b340e7ba792f6ba5e 78 PANTHER PTHR13847 1 66 1.4E-29 T 23-04-2016 MSIP34_RS14245 cda94f6b93a6483b340e7ba792f6ba5e 78 SUPERFAMILY SSF51905 3 72 1.55E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS14245 cda94f6b93a6483b340e7ba792f6ba5e 78 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 3 78 9.6E-36 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 MSIP34_RS14245 cda94f6b93a6483b340e7ba792f6ba5e 78 Gene3D G3DSA:3.50.50.60 3 57 5.8E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 MSIP34_RS14245 cda94f6b93a6483b340e7ba792f6ba5e 78 PANTHER PTHR13847:SF214 1 66 1.4E-29 T 23-04-2016 MSIP34_RS01830 e14fd7da2f9ce5ae6af5f5fdc4aa79e1 305 PANTHER PTHR30151 59 304 6.9E-92 T 23-04-2016 MSIP34_RS01830 e14fd7da2f9ce5ae6af5f5fdc4aa79e1 305 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 99 293 3.6E-75 T 23-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 MSIP34_RS01830 e14fd7da2f9ce5ae6af5f5fdc4aa79e1 305 SUPERFAMILY SSF161098 109 293 1.09E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS01830 e14fd7da2f9ce5ae6af5f5fdc4aa79e1 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 301 2.1E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS01830 e14fd7da2f9ce5ae6af5f5fdc4aa79e1 305 Gene3D G3DSA:1.10.3720.10 106 302 3.5E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 MSIP34_RS01830 e14fd7da2f9ce5ae6af5f5fdc4aa79e1 305 PANTHER PTHR30151:SF7 59 304 6.9E-92 T 23-04-2016 MSIP34_RS06970 7d30084acce770227e116f24971a2e02 472 PANTHER PTHR30365 1 455 4.7E-270 T 23-04-2016 MSIP34_RS06970 7d30084acce770227e116f24971a2e02 472 PANTHER PTHR30365:SF8 1 455 4.7E-270 T 23-04-2016 MSIP34_RS06970 7d30084acce770227e116f24971a2e02 472 PIRSF PIRSF006446 1 455 3.7E-212 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 MSIP34_RS06970 7d30084acce770227e116f24971a2e02 472 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 434 1.9E-163 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 MSIP34_RS13925 176fe54f1e18f56e92c1866313e457f1 256 PANTHER PTHR30096 1 254 1.9E-96 T 23-04-2016 MSIP34_RS13925 176fe54f1e18f56e92c1866313e457f1 256 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 3 250 1.8E-45 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 MSIP34_RS13925 176fe54f1e18f56e92c1866313e457f1 256 SUPERFAMILY SSF53213 3 254 3.4E-83 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 MSIP34_RS13925 176fe54f1e18f56e92c1866313e457f1 256 PIRSF PIRSF006157 1 256 1.1E-86 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 MSIP34_RS13925 176fe54f1e18f56e92c1866313e457f1 256 Gene3D G3DSA:3.40.830.10 1 254 9.3E-91 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 MSIP34_RS13925 176fe54f1e18f56e92c1866313e457f1 256 PANTHER PTHR30096:SF0 1 254 1.9E-96 T 23-04-2016 MSIP34_RS13135 030b4639f0a3f818c1c33bd084048490 215 SUPERFAMILY SSF48452 61 183 1.21E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13135 030b4639f0a3f818c1c33bd084048490 215 Pfam PF13181 Tetratricopeptide repeat 162 185 0.0041 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS13135 030b4639f0a3f818c1c33bd084048490 215 Pfam PF13181 Tetratricopeptide repeat 138 155 0.0051 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS13135 030b4639f0a3f818c1c33bd084048490 215 Gene3D G3DSA:1.25.40.10 96 186 1.3E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS02500 9dae55e1df1aef2ecb8f6460b3d2ca49 175 Gene3D G3DSA:3.90.80.10 4 174 3.6E-61 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 MSIP34_RS02500 9dae55e1df1aef2ecb8f6460b3d2ca49 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.9E-53 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 MSIP34_RS02500 9dae55e1df1aef2ecb8f6460b3d2ca49 175 PANTHER PTHR10286 5 175 3.3E-72 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 MSIP34_RS02500 9dae55e1df1aef2ecb8f6460b3d2ca49 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.92 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 MSIP34_RS02500 9dae55e1df1aef2ecb8f6460b3d2ca49 175 SUPERFAMILY SSF50324 3 174 1.03E-68 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 MSIP34_RS01675 a2bc38fe89fe0de62a4a42c6a8049c98 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.517 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01675 a2bc38fe89fe0de62a4a42c6a8049c98 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 4.6E-46 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01675 a2bc38fe89fe0de62a4a42c6a8049c98 144 PANTHER PTHR12934 1 144 4.0E-61 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 MSIP34_RS01675 a2bc38fe89fe0de62a4a42c6a8049c98 144 Gene3D G3DSA:3.100.10.10 32 143 1.4E-22 T 23-04-2016 MSIP34_RS01675 a2bc38fe89fe0de62a4a42c6a8049c98 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.4E-28 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P MSIP34_RS01675 a2bc38fe89fe0de62a4a42c6a8049c98 144 SUPERFAMILY SSF52080 4 142 4.19E-43 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P MSIP34_RS01855 31a9b168060410e253038c4149b4f67b 74 Pfam PF05433 Glycine zipper 2TM domain 33 70 5.7E-6 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 PANTHER PTHR23083 11 131 2.9E-18 T 23-04-2016 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 Pfam PF13844 Glycosyl transferase family 41 350 526 4.3E-23 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 Pfam PF13844 Glycosyl transferase family 41 173 313 1.8E-25 T 23-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 Gene3D G3DSA:1.25.40.10 12 134 4.0E-22 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 SUPERFAMILY SSF53756 188 500 1.0E-6 T 23-04-2016 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 Pfam PF14559 Tetratricopeptide repeat 68 124 6.0E-10 T 23-04-2016 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 SUPERFAMILY SSF48452 20 134 2.33E-21 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 SMART SM00028 19 52 64.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 SMART SM00028 53 86 25.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS13950 8bd4f40e1b3f577da22b48ee6dc63fdc 560 SMART SM00028 87 120 5.5E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 MSIP34_RS05645 1c9db384429e806c52ccd2c257040892 68 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 1.8E-23 T 23-04-2016 IPR018638 Domain of unknown function DUF2061, membrane MSIP34_RS03020 fa2e06d8292141c2f3e22ef2188f66ad 214 SUPERFAMILY SSF50630 98 202 2.39E-17 T 23-04-2016 IPR021109 Aspartic peptidase domain MSIP34_RS03020 fa2e06d8292141c2f3e22ef2188f66ad 214 PANTHER PTHR41535 19 204 1.8E-17 T 23-04-2016 MSIP34_RS03020 fa2e06d8292141c2f3e22ef2188f66ad 214 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 118 129 - T 23-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 MSIP34_RS03020 fa2e06d8292141c2f3e22ef2188f66ad 214 PANTHER PTHR41535:SF1 19 204 1.8E-17 T 23-04-2016 MSIP34_RS03020 fa2e06d8292141c2f3e22ef2188f66ad 214 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 94 208 1.3E-29 T 23-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal MSIP34_RS03020 fa2e06d8292141c2f3e22ef2188f66ad 214 Pfam PF13975 gag-polyprotein putative aspartyl protease 108 198 1.5E-20 T 23-04-2016 MSIP34_RS00160 889e2fee0155a8d18ad922656a9904a4 374 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 39 356 1.1E-62 T 23-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX MSIP34_RS00160 889e2fee0155a8d18ad922656a9904a4 374 PANTHER PTHR38043 4 356 4.1E-35 T 23-04-2016 MSIP34_RS04775 a77e10c0c4c1f4becdca98dc4bb6700f 166 Pfam PF02600 Disulfide bond formation protein DsbB 10 159 8.3E-42 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 MSIP34_RS04775 a77e10c0c4c1f4becdca98dc4bb6700f 166 PANTHER PTHR36570:SF1 3 162 7.7E-35 T 23-04-2016 MSIP34_RS04775 a77e10c0c4c1f4becdca98dc4bb6700f 166 PANTHER PTHR36570 3 162 7.7E-35 T 23-04-2016 MSIP34_RS04775 a77e10c0c4c1f4becdca98dc4bb6700f 166 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 165 21.652 T 23-04-2016 IPR022920 Disulphide bond formation protein DsbB MSIP34_RS04775 a77e10c0c4c1f4becdca98dc4bb6700f 166 SUPERFAMILY SSF158442 13 160 1.26E-40 T 23-04-2016 MSIP34_RS04775 a77e10c0c4c1f4becdca98dc4bb6700f 166 Gene3D G3DSA:1.20.1550.10 3 163 4.1E-49 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain MSIP34_RS01925 52be07743d16d765b507eae1ac423a61 117 Gene3D G3DSA:3.30.1330.40 9 115 3.8E-25 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like MSIP34_RS01925 52be07743d16d765b507eae1ac423a61 117 PANTHER PTHR11803:SF17 12 115 5.4E-39 T 23-04-2016 MSIP34_RS01925 52be07743d16d765b507eae1ac423a61 117 Pfam PF01042 Endoribonuclease L-PSP 6 115 1.0E-26 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family MSIP34_RS01925 52be07743d16d765b507eae1ac423a61 117 PANTHER PTHR11803 12 115 5.4E-39 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family MSIP34_RS01925 52be07743d16d765b507eae1ac423a61 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 92 110 - T 23-04-2016 IPR019897 RidA, conserved site MSIP34_RS01925 52be07743d16d765b507eae1ac423a61 117 SUPERFAMILY SSF55298 5 115 2.83E-29 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like MSIP34_RS03570 85e3f8deebf3c0a5341c13d2ed174c6a 416 SUPERFAMILY SSF53822 53 403 4.37E-93 T 23-04-2016 IPR028082 Periplasmic binding protein-like I MSIP34_RS03570 85e3f8deebf3c0a5341c13d2ed174c6a 416 Gene3D G3DSA:3.40.50.2300 171 355 9.4E-66 T 23-04-2016 MSIP34_RS03570 85e3f8deebf3c0a5341c13d2ed174c6a 416 PANTHER PTHR30483 32 416 1.8E-177 T 23-04-2016 MSIP34_RS03570 85e3f8deebf3c0a5341c13d2ed174c6a 416 Pfam PF13433 Periplasmic binding protein domain 54 413 1.5E-129 T 23-04-2016 MSIP34_RS03570 85e3f8deebf3c0a5341c13d2ed174c6a 416 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 54 411 1.7E-157 T 23-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA MSIP34_RS03570 85e3f8deebf3c0a5341c13d2ed174c6a 416 PANTHER PTHR30483:SF8 32 416 1.8E-177 T 23-04-2016 MSIP34_RS10565 91dd74bc3e9a195e6b860e93c65e4469 119 Pfam PF11860 Protein of unknown function (DUF3380) 5 118 4.4E-40 T 23-04-2016 IPR024408 Domain of unknown function DUF3380 MSIP34_RS01060 c47e2d9b98b9286e00d36b9323b6f21e 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 2.5E-32 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 MSIP34_RS01060 c47e2d9b98b9286e00d36b9323b6f21e 109 PANTHER PTHR33231 1 99 1.3E-37 T 23-04-2016 MSIP34_RS01060 c47e2d9b98b9286e00d36b9323b6f21e 109 SUPERFAMILY SSF69754 2 103 2.22E-36 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 MSIP34_RS01060 c47e2d9b98b9286e00d36b9323b6f21e 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 3.5E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 MSIP34_RS01060 c47e2d9b98b9286e00d36b9323b6f21e 109 Gene3D G3DSA:3.30.160.100 1 95 1.4E-36 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 MSIP34_RS08780 a700aad02cf437fc4192d1e8564ae862 451 PANTHER PTHR30563 29 449 5.9E-77 T 23-04-2016 MSIP34_RS08780 a700aad02cf437fc4192d1e8564ae862 451 Pfam PF02646 RmuC family 152 429 4.2E-64 T 23-04-2016 IPR003798 DNA recombination RmuC MSIP34_RS13525 0c64a4542cbcfd885256d7e5b8ff5d65 328 SUPERFAMILY SSF53300 41 188 4.0E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS13525 0c64a4542cbcfd885256d7e5b8ff5d65 328 Pfam PF13519 von Willebrand factor type A domain 43 158 2.3E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS11755 599642bb7ed8cb40693affa5c70a9a40 175 Pfam PF01292 Prokaryotic cytochrome b561 7 175 5.5E-35 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 MSIP34_RS11755 599642bb7ed8cb40693affa5c70a9a40 175 SUPERFAMILY SSF81342 6 175 6.12E-41 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 MSIP34_RS11755 599642bb7ed8cb40693affa5c70a9a40 175 PANTHER PTHR30529:SF5 1 175 3.5E-59 T 23-04-2016 MSIP34_RS11755 599642bb7ed8cb40693affa5c70a9a40 175 PANTHER PTHR30529 1 175 3.5E-59 T 23-04-2016 MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 182 1.6E-11 T 23-04-2016 MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 PANTHER PTHR11260 3 203 1.4E-22 T 23-04-2016 MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 Gene3D G3DSA:1.20.1050.10 92 195 1.4E-14 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 Gene3D G3DSA:3.40.30.10 4 91 3.3E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 78 5.0E-20 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 SUPERFAMILY SSF52833 4 95 1.16E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11260 e92c7c4cba325821048b6b7917df553e 203 SUPERFAMILY SSF47616 88 191 7.24E-20 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like MSIP34_RS04935 0f871de4eecb753010a4f190d3687611 224 Pfam PF02592 Putative vitamin uptake transporter 35 195 1.7E-45 T 23-04-2016 IPR003744 Protein of unknown function DUF165 MSIP34_RS04935 0f871de4eecb753010a4f190d3687611 224 PANTHER PTHR34300 1 219 1.5E-55 T 23-04-2016 MSIP34_RS04935 0f871de4eecb753010a4f190d3687611 224 PANTHER PTHR34300:SF2 1 219 1.5E-55 T 23-04-2016 MSIP34_RS04935 0f871de4eecb753010a4f190d3687611 224 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 2 202 9.0E-35 T 23-04-2016 IPR003744 Protein of unknown function DUF165 MSIP34_RS11265 e29c4c4f5f783d038602a68b4871e315 67 Pfam PF11127 Protein of unknown function (DUF2892) 1 62 9.5E-18 T 23-04-2016 IPR021309 Protein of unknown function DUF2892 MSIP34_RS12975 c90769ae08b3e87caaf47ec1a3401999 347 Pfam PF01988 VIT family 130 339 2.1E-63 T 23-04-2016 IPR008217 Ccc1 family MSIP34_RS12975 c90769ae08b3e87caaf47ec1a3401999 347 PANTHER PTHR31851 130 342 1.3E-64 T 23-04-2016 MSIP34_RS09430 478a941f1bf2da1bd13cb110c74fae5a 384 Pfam PF00534 Glycosyl transferases group 1 195 359 2.7E-41 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 MSIP34_RS09430 478a941f1bf2da1bd13cb110c74fae5a 384 Pfam PF13439 Glycosyltransferase Family 4 14 182 2.3E-31 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain MSIP34_RS09430 478a941f1bf2da1bd13cb110c74fae5a 384 Gene3D G3DSA:3.40.50.2000 175 359 1.3E-31 T 23-04-2016 MSIP34_RS09430 478a941f1bf2da1bd13cb110c74fae5a 384 SUPERFAMILY SSF53756 2 381 1.23E-84 T 23-04-2016 MSIP34_RS09430 478a941f1bf2da1bd13cb110c74fae5a 384 PANTHER PTHR12526 2 383 1.1E-74 T 23-04-2016 MSIP34_RS13610 273b3c5f1b58242d86c395a1b786efe5 122 PANTHER PTHR26402 3 121 1.5E-35 T 23-04-2016 MSIP34_RS13610 273b3c5f1b58242d86c395a1b786efe5 122 PANTHER PTHR26402:SF586 3 121 1.5E-35 T 23-04-2016 MSIP34_RS13610 273b3c5f1b58242d86c395a1b786efe5 122 SMART SM00448 3 116 9.1E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13610 273b3c5f1b58242d86c395a1b786efe5 122 Gene3D G3DSA:3.40.50.2300 3 120 1.2E-34 T 23-04-2016 MSIP34_RS13610 273b3c5f1b58242d86c395a1b786efe5 122 Pfam PF00072 Response regulator receiver domain 5 116 4.2E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS13610 273b3c5f1b58242d86c395a1b786efe5 122 SUPERFAMILY SSF52172 3 120 8.68E-34 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS10515 78cb3956c8741bee0d80e66679439e30 487 Gene3D G3DSA:3.40.1140.10 207 296 7.6E-16 T 23-04-2016 MSIP34_RS10515 78cb3956c8741bee0d80e66679439e30 487 Gene3D G3DSA:3.40.1140.10 29 112 7.6E-16 T 23-04-2016 MSIP34_RS10515 78cb3956c8741bee0d80e66679439e30 487 SUPERFAMILY SSF52540 25 276 1.11E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS10515 78cb3956c8741bee0d80e66679439e30 487 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 148 273 4.2E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 MSIP34_RS06755 28fafd411115bc0bc28b0e8a1b3789b2 225 Pfam PF05552 Conserved TM helix 12 58 2.1E-13 T 23-04-2016 IPR008910 Conserved TM helix MSIP34_RS06755 28fafd411115bc0bc28b0e8a1b3789b2 225 Pfam PF05552 Conserved TM helix 107 151 1.7E-12 T 23-04-2016 IPR008910 Conserved TM helix MSIP34_RS06875 e7a36a54bf9f37f6f596512f6584d5c9 220 Pfam PF07077 Protein of unknown function (DUF1345) 36 208 1.3E-53 T 23-04-2016 IPR009781 Protein of unknown function DUF1345 MSIP34_RS11795 5d083109a5a2521874423230233932d8 179 Gene3D G3DSA:1.10.760.10 68 173 2.6E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11795 5d083109a5a2521874423230233932d8 179 SUPERFAMILY SSF46626 62 171 6.08E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11795 5d083109a5a2521874423230233932d8 179 SUPERFAMILY SSF46626 2 24 6.08E-22 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS11795 5d083109a5a2521874423230233932d8 179 Pfam PF00034 Cytochrome c 84 170 3.3E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 MSIP34_RS12950 40460c1e2274b8bdb9cbf488567d8f3a 105 PANTHER PTHR11780 6 103 3.2E-28 T 23-04-2016 MSIP34_RS12950 40460c1e2274b8bdb9cbf488567d8f3a 105 Gene3D G3DSA:3.40.30.10 6 104 5.0E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS12950 40460c1e2274b8bdb9cbf488567d8f3a 105 PANTHER PTHR11780:SF12 6 103 3.2E-28 T 23-04-2016 MSIP34_RS12950 40460c1e2274b8bdb9cbf488567d8f3a 105 SUPERFAMILY SSF52833 5 103 1.9E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS12950 40460c1e2274b8bdb9cbf488567d8f3a 105 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 90 2.6E-6 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 Pfam PF03069 Acetamidase/Formamidase family 7 384 1.0E-176 T 23-04-2016 IPR004304 Acetamidase/Formamidase GO:0016811 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 PANTHER PTHR31891 1 396 1.1E-240 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 SUPERFAMILY SSF141130 213 383 3.79E-77 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 SUPERFAMILY SSF141130 14 164 3.79E-77 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 Gene3D G3DSA:2.60.120.580 3 94 4.6E-67 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 Gene3D G3DSA:2.60.120.580 147 164 4.6E-67 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 Gene3D G3DSA:2.60.120.580 213 281 4.6E-67 T 23-04-2016 MSIP34_RS03560 c9a696391dfbba461f1916c0c8ce88ea 407 PANTHER PTHR31891:SF1 1 396 1.1E-240 T 23-04-2016 MSIP34_RS09460 12584df079f7b8759b75276a37a7548a 177 PANTHER PTHR14969 1 176 1.4E-26 T 23-04-2016 MSIP34_RS09460 12584df079f7b8759b75276a37a7548a 177 Pfam PF01569 PAP2 superfamily 67 175 7.9E-21 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS09460 12584df079f7b8759b75276a37a7548a 177 Gene3D G3DSA:1.20.144.10 13 174 2.2E-36 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS09460 12584df079f7b8759b75276a37a7548a 177 SUPERFAMILY SSF48317 12 176 3.4E-35 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS09460 12584df079f7b8759b75276a37a7548a 177 SMART SM00014 65 174 1.2E-14 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase MSIP34_RS02485 a2d39504d675f0bc4dddacca2e8d1205 137 PANTHER PTHR37819:SF1 1 136 9.9E-29 T 23-04-2016 MSIP34_RS02485 a2d39504d675f0bc4dddacca2e8d1205 137 PIRSF PIRSF029598 1 132 7.9E-32 T 23-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 MSIP34_RS02485 a2d39504d675f0bc4dddacca2e8d1205 137 PANTHER PTHR37819 1 136 9.9E-29 T 23-04-2016 MSIP34_RS02485 a2d39504d675f0bc4dddacca2e8d1205 137 Pfam PF06146 Phosphate-starvation-inducible E 48 113 3.2E-17 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like MSIP34_RS11775 2d2bf9c35810caca5add2274533de13c 150 Pfam PF00578 AhpC/TSA family 3 129 2.8E-32 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 MSIP34_RS11775 2d2bf9c35810caca5add2274533de13c 150 SUPERFAMILY SSF52833 2 150 1.3E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11775 2d2bf9c35810caca5add2274533de13c 150 PANTHER PTHR10681 1 150 1.5E-43 T 23-04-2016 MSIP34_RS11775 2d2bf9c35810caca5add2274533de13c 150 PIRSF PIRSF000239 1 150 4.0E-27 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 MSIP34_RS11775 2d2bf9c35810caca5add2274533de13c 150 Gene3D G3DSA:3.40.30.10 2 150 2.2E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS11930 02d96aad34301cbc7d83518bf58b0cb4 372 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 254 5.9E-25 T 23-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 65 134 7.1E-24 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 PRINTS PR00956 Flagellar motor switch protein FliN signature 110 125 2.0E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 PRINTS PR00956 Flagellar motor switch protein FliN signature 64 80 2.0E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 PRINTS PR00956 Flagellar motor switch protein FliN signature 97 110 2.0E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 PRINTS PR00956 Flagellar motor switch protein FliN signature 81 97 2.0E-28 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 SUPERFAMILY SSF101801 61 143 2.62E-25 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 Gene3D G3DSA:2.30.330.10 55 144 7.3E-39 T 23-04-2016 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 PANTHER PTHR30034:SF1 41 143 1.9E-31 T 23-04-2016 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 61 135 1.3E-32 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 MSIP34_RS03905 047f290713bae84934c4452e93fbf9d9 145 PANTHER PTHR30034 41 143 1.9E-31 T 23-04-2016 MSIP34_RS01645 1e978ac8e36a146b844182b0f1f026d3 101 Gene3D G3DSA:4.10.830.10 43 101 3.8E-29 T 23-04-2016 MSIP34_RS01645 1e978ac8e36a146b844182b0f1f026d3 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 2.3E-25 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01645 1e978ac8e36a146b844182b0f1f026d3 101 PANTHER PTHR19836 1 101 6.3E-50 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MSIP34_RS01645 1e978ac8e36a146b844182b0f1f026d3 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.171 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid MSIP34_RS01645 1e978ac8e36a146b844182b0f1f026d3 101 SUPERFAMILY SSF57716 2 101 7.84E-36 T 23-04-2016 MSIP34_RS05595 e49801e63c6559bb74b494b33cf475f7 245 Gene3D G3DSA:3.40.50.150 105 232 2.1E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05595 e49801e63c6559bb74b494b33cf475f7 245 SUPERFAMILY SSF53335 87 236 5.64E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05595 e49801e63c6559bb74b494b33cf475f7 245 Pfam PF13489 Methyltransferase domain 85 226 1.5E-28 T 23-04-2016 MSIP34_RS11080 fe4f5590816a540e5bb3cb35129e1886 111 Gene3D G3DSA:3.30.70.120 9 103 1.6E-15 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal MSIP34_RS11080 fe4f5590816a540e5bb3cb35129e1886 111 Pfam PF11582 Protein of unknown function (DUF3240) 8 103 1.9E-11 T 23-04-2016 IPR021634 Protein of unknown function DUF3240 MSIP34_RS08795 93ba0c5d0fa0be5f1a0c4b892ab039c9 298 PANTHER PTHR22726 70 274 1.4E-49 T 23-04-2016 MSIP34_RS08795 93ba0c5d0fa0be5f1a0c4b892ab039c9 298 Gene3D G3DSA:3.30.2010.10 93 175 1.5E-19 T 23-04-2016 MSIP34_RS08795 93ba0c5d0fa0be5f1a0c4b892ab039c9 298 PANTHER PTHR22726:SF10 70 274 1.4E-49 T 23-04-2016 MSIP34_RS08795 93ba0c5d0fa0be5f1a0c4b892ab039c9 298 Pfam PF01435 Peptidase family M48 96 275 4.1E-31 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 SUPERFAMILY SSF46894 123 217 3.68E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 Pfam PF00072 Response regulator receiver domain 3 113 2.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 SUPERFAMILY SSF52172 1 118 2.7E-36 T 23-04-2016 IPR011006 CheY-like superfamily MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 PANTHER PTHR26402:SF518 1 217 1.7E-77 T 23-04-2016 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 SMART SM00448 1 112 7.6E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 SMART SM00862 146 217 6.3E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 PANTHER PTHR26402 1 217 1.7E-77 T 23-04-2016 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 Gene3D G3DSA:3.40.50.2300 1 120 1.1E-36 T 23-04-2016 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 216 9.9E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 MSIP34_RS11885 5138022ee02fbea1d9e9e52f00c6f94e 221 Gene3D G3DSA:1.10.10.10 126 218 1.8E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain MSIP34_RS03630 9605843842e3c4a6d99818d5cb9a83ac 192 PIRSF PIRSF016919 4 192 1.1E-43 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein MSIP34_RS03630 9605843842e3c4a6d99818d5cb9a83ac 192 Pfam PF04955 HupE / UreJ protein 14 189 1.3E-47 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein MSIP34_RS05765 18d62c9562103ec269de3f49f4f65a5c 113 Pfam PF04972 BON domain 45 109 2.3E-12 T 23-04-2016 IPR007055 BON domain MSIP34_RS11300 cf804d3d4480c6d0d8ba86b2e6acdb83 435 Gene3D G3DSA:1.20.1600.10 43 428 2.5E-61 T 23-04-2016 MSIP34_RS11300 cf804d3d4480c6d0d8ba86b2e6acdb83 435 Pfam PF02321 Outer membrane efflux protein 252 427 6.3E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS11300 cf804d3d4480c6d0d8ba86b2e6acdb83 435 Pfam PF02321 Outer membrane efflux protein 51 229 5.2E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 MSIP34_RS11300 cf804d3d4480c6d0d8ba86b2e6acdb83 435 PANTHER PTHR30203:SF1 43 430 3.2E-53 T 23-04-2016 MSIP34_RS11300 cf804d3d4480c6d0d8ba86b2e6acdb83 435 SUPERFAMILY SSF56954 22 428 2.75E-69 T 23-04-2016 MSIP34_RS11300 cf804d3d4480c6d0d8ba86b2e6acdb83 435 PANTHER PTHR30203 43 430 3.2E-53 T 23-04-2016 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 SUPERFAMILY SSF111369 45 254 3.66E-23 T 23-04-2016 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 374 1.7E-47 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 PANTHER PTHR30572 32 387 5.1E-88 T 23-04-2016 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 Gene3D G3DSA:2.40.50.100 178 209 2.1E-16 T 23-04-2016 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 Gene3D G3DSA:2.40.50.100 57 89 2.1E-16 T 23-04-2016 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 PANTHER PTHR30572:SF3 32 387 5.1E-88 T 23-04-2016 MSIP34_RS02180 301fb4c4c3e1800087e3de5941c8e6e1 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 259 9.1E-19 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain MSIP34_RS04795 91e6eac5b89b5221aabfeb38761e162f 139 Pfam PF07027 Protein of unknown function (DUF1318) 41 139 1.6E-23 T 23-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 MSIP34_RS04795 91e6eac5b89b5221aabfeb38761e162f 139 PIRSF PIRSF025560 6 139 3.5E-23 T 23-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 MSIP34_RS05800 73da6827c27ef61488fd7c6b09e73f64 184 Pfam PF12276 Protein of unknown function (DUF3617) 21 176 6.0E-37 T 23-04-2016 IPR022061 Protein of unknown function DUF3617 MSIP34_RS10815 452b1401b6bab989aa5fa5fa967ef0de 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 69 1.7E-20 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 MSIP34_RS10815 452b1401b6bab989aa5fa5fa967ef0de 71 Gene3D G3DSA:2.40.50.100 6 69 8.2E-22 T 23-04-2016 MSIP34_RS10815 452b1401b6bab989aa5fa5fa967ef0de 71 SUPERFAMILY SSF50331 6 69 1.36E-17 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal MSIP34_RS10815 452b1401b6bab989aa5fa5fa967ef0de 71 Pfam PF03459 TOBE domain 8 67 1.2E-16 T 23-04-2016 IPR005116 Transport-associated OB, type 1 MSIP34_RS07730 b66bb688644fb3932d35fcb233a63703 206 Pfam PF06073 Bacterial protein of unknown function (DUF934) 86 195 2.1E-35 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 SUPERFAMILY SSF81901 39 246 8.46E-46 T 23-04-2016 MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 Pfam PF08238 Sel1 repeat 101 137 1.6E-10 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 Pfam PF08238 Sel1 repeat 140 173 1.9E-8 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 Pfam PF08238 Sel1 repeat 174 206 0.0024 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 Pfam PF08238 Sel1 repeat 65 99 6.2E-11 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 SMART SM00671 174 209 4.5E-5 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 SMART SM00671 101 137 7.9E-12 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 SMART SM00671 138 173 1.3E-8 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 SMART SM00671 65 100 5.6E-12 T 23-04-2016 IPR006597 Sel1-like repeat MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 PANTHER PTHR11102 49 226 1.8E-50 T 23-04-2016 MSIP34_RS13740 bc43da9aaa409e37a32a4c5e5f4820c2 255 Gene3D G3DSA:1.25.40.10 45 210 5.7E-55 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS11585 37645760b80126ba65309a23b47dc21a 242 Pfam PF13563 2'-5' RNA ligase superfamily 60 205 2.4E-13 T 23-04-2016 MSIP34_RS11585 37645760b80126ba65309a23b47dc21a 242 Gene3D G3DSA:3.90.1140.10 44 201 1.2E-6 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase MSIP34_RS11585 37645760b80126ba65309a23b47dc21a 242 SUPERFAMILY SSF55144 44 221 1.1E-7 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase MSIP34_RS10200 c753b5e01e260e703279ccabb2960019 88 Gene3D G3DSA:1.20.59.10 1 84 1.4E-14 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS10200 c753b5e01e260e703279ccabb2960019 88 SUPERFAMILY SSF48600 1 85 1.83E-17 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS10200 c753b5e01e260e703279ccabb2960019 88 SMART SM00830 7 87 4.8E-12 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS10200 c753b5e01e260e703279ccabb2960019 88 Pfam PF01817 Chorismate mutase type II 7 81 3.2E-12 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 MSIP34_RS09740 cf6985c48168eae1c62ac53406c1c715 300 PIRSF PIRSF003097 2 295 4.0E-70 T 23-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 MSIP34_RS09740 cf6985c48168eae1c62ac53406c1c715 300 Pfam PF02687 FtsX-like permease family 175 287 2.1E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 MSIP34_RS09740 cf6985c48168eae1c62ac53406c1c715 300 PANTHER PTHR30489 32 297 9.0E-27 T 23-04-2016 MSIP34_RS09260 0663c2cf28435a8e9b832f7f3450d45d 301 Pfam PF04230 Polysaccharide pyruvyl transferase 56 184 1.9E-7 T 23-04-2016 IPR007345 Polysaccharide pyruvyl transferase MSIP34_RS05785 a92428dfe494c7cd0c2c58d611537415 157 PANTHER PTHR35146 1 152 8.0E-55 T 23-04-2016 MSIP34_RS05785 a92428dfe494c7cd0c2c58d611537415 157 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 4.7E-48 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 MSIP34_RS05785 a92428dfe494c7cd0c2c58d611537415 157 PANTHER PTHR35146:SF1 1 152 8.0E-55 T 23-04-2016 MSIP34_RS05785 a92428dfe494c7cd0c2c58d611537415 157 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.0 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 MSIP34_RS02160 0dc79cdbe9037941948415e528888795 88 Pfam PF12365 Protein of unknown function (DUF3649) 57 80 9.0E-11 T 23-04-2016 IPR022109 Protein of unknown function DUF3649 MSIP34_RS12195 ad796e6d36fc4f62766257547182c41e 219 SUPERFAMILY SSF103025 5 217 6.47E-19 T 23-04-2016 MSIP34_RS12195 ad796e6d36fc4f62766257547182c41e 219 Pfam PF04268 Sarcosine oxidase, gamma subunit family 62 206 4.3E-7 T 23-04-2016 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 MSIP34_RS12195 ad796e6d36fc4f62766257547182c41e 219 Gene3D G3DSA:3.30.1360.120 6 54 3.0E-8 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS12195 ad796e6d36fc4f62766257547182c41e 219 Gene3D G3DSA:3.30.1360.120 128 215 3.0E-8 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 MSIP34_RS09590 2ae270bd7a0c54363d6ca62ff11ca248 220 Gene3D G3DSA:3.40.50.1000 6 203 2.2E-9 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS09590 2ae270bd7a0c54363d6ca62ff11ca248 220 SUPERFAMILY SSF56784 1 217 6.89E-19 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS09590 2ae270bd7a0c54363d6ca62ff11ca248 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 187 7.1E-7 T 23-04-2016 IPR023214 HAD-like domain MSIP34_RS02915 5baa32b85ab406395cf87d5af36939de 176 Pfam PF04390 Lipopolysaccharide-assembly 18 163 2.7E-17 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 MSIP34_RS02915 5baa32b85ab406395cf87d5af36939de 176 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 12 168 24.602 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 MSIP34_RS02915 5baa32b85ab406395cf87d5af36939de 176 Gene3D G3DSA:3.30.160.150 27 169 3.8E-38 T 23-04-2016 MSIP34_RS02915 5baa32b85ab406395cf87d5af36939de 176 PANTHER PTHR38098 8 164 3.6E-16 T 23-04-2016 MSIP34_RS02915 5baa32b85ab406395cf87d5af36939de 176 PANTHER PTHR38098:SF1 8 164 3.6E-16 T 23-04-2016 MSIP34_RS12955 75cfb00fe927d424075405eaa3da2e14 314 SUPERFAMILY SSF74653 89 98 8.37E-17 T 23-04-2016 MSIP34_RS12955 75cfb00fe927d424075405eaa3da2e14 314 SUPERFAMILY SSF74653 201 309 8.37E-17 T 23-04-2016 MSIP34_RS12955 75cfb00fe927d424075405eaa3da2e14 314 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 228 305 2.2E-13 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS12955 75cfb00fe927d424075405eaa3da2e14 314 Gene3D G3DSA:3.30.1150.10 203 309 8.4E-23 T 23-04-2016 MSIP34_RS12955 75cfb00fe927d424075405eaa3da2e14 314 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 229 306 1.1E-13 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 MSIP34_RS11945 adf83a0063ed8252b952f96e83f43dc4 345 Pfam PF03432 Relaxase/Mobilisation nuclease domain 129 214 1.1E-6 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 MSIP34_RS00835 2d69e8bf3987cd4320da07adb6bde76e 76 Gene3D G3DSA:1.20.5.170 12 53 1.9E-6 T 23-04-2016 MSIP34_RS04800 b803024a89a942eef4cd229896c819e7 259 SUPERFAMILY SSF53098 4 223 2.17E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS04800 b803024a89a942eef4cd229896c819e7 259 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 256 7.7E-93 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like MSIP34_RS04800 b803024a89a942eef4cd229896c819e7 259 Gene3D G3DSA:3.30.420.10 5 214 1.3E-31 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 MSIP34_RS06165 13010f89c38d0072e565017b422122ae 255 Pfam PF02104 SURF1 family 25 229 4.8E-36 T 23-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 MSIP34_RS06165 13010f89c38d0072e565017b422122ae 255 PANTHER PTHR23427 18 236 5.0E-16 T 23-04-2016 MSIP34_RS06165 13010f89c38d0072e565017b422122ae 255 PANTHER PTHR23427:SF2 18 236 5.0E-16 T 23-04-2016 MSIP34_RS06195 d56a50f4993545482da54c5c48be28f2 112 Pfam PF10003 Integral membrane protein (DUF2244) 1 108 8.5E-34 T 23-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane MSIP34_RS08270 364985c75785b15af2592ade553e3962 482 Pfam PF13264 Domain of unknown function (DUF4055) 243 391 7.5E-51 T 23-04-2016 IPR025129 Domain of unknown function DUF4055 MSIP34_RS13515 5badf09795613680f02e71b53dad2fa1 327 Gene3D G3DSA:3.40.50.410 81 198 2.1E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS13515 5badf09795613680f02e71b53dad2fa1 327 Pfam PF13519 von Willebrand factor type A domain 82 196 7.1E-11 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS13515 5badf09795613680f02e71b53dad2fa1 327 SUPERFAMILY SSF53300 81 224 3.25E-15 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS13515 5badf09795613680f02e71b53dad2fa1 327 SMART SM00327 79 253 1.1E-6 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS04490 4a6dc3a6df47ca57c3b1ad8164707ad7 143 Pfam PF13488 Glycine zipper 42 81 1.3E-5 T 23-04-2016 MSIP34_RS05220 8b51442e07550723ce5b0c611822e27d 226 Pfam PF07589 PEP-CTERM motif 200 225 5.9E-6 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS00100 57b5662d4acae96b64e00faa8d52d249 150 Pfam PF11906 Protein of unknown function (DUF3426) 3 146 6.4E-43 T 23-04-2016 IPR021834 Protein of unknown function DUF3426 MSIP34_RS03770 d62dc8c6b217e21b1027462a307e1c18 94 Pfam PF02315 Methanol dehydrogenase beta subunit 14 94 7.0E-44 T 23-04-2016 IPR003420 Methanol dehydrogenase, beta subunit GO:0004022|GO:0015946|GO:0055114 KEGG: 00010+1.1.2.7|KEGG: 00625+1.1.2.7|KEGG: 00680+1.1.2.7|MetaCyc: PWY-6966 MSIP34_RS03770 d62dc8c6b217e21b1027462a307e1c18 94 PIRSF PIRSF029163 3 94 9.8E-50 T 23-04-2016 IPR003420 Methanol dehydrogenase, beta subunit GO:0004022|GO:0015946|GO:0055114 KEGG: 00010+1.1.2.7|KEGG: 00625+1.1.2.7|KEGG: 00680+1.1.2.7|MetaCyc: PWY-6966 MSIP34_RS03770 d62dc8c6b217e21b1027462a307e1c18 94 SUPERFAMILY SSF48666 26 94 9.68E-39 T 23-04-2016 IPR003420 Methanol dehydrogenase, beta subunit GO:0004022|GO:0015946|GO:0055114 KEGG: 00010+1.1.2.7|KEGG: 00625+1.1.2.7|KEGG: 00680+1.1.2.7|MetaCyc: PWY-6966 MSIP34_RS03770 d62dc8c6b217e21b1027462a307e1c18 94 Gene3D G3DSA:4.10.160.10 26 94 2.8E-42 T 23-04-2016 IPR003420 Methanol dehydrogenase, beta subunit GO:0004022|GO:0015946|GO:0055114 KEGG: 00010+1.1.2.7|KEGG: 00625+1.1.2.7|KEGG: 00680+1.1.2.7|MetaCyc: PWY-6966 MSIP34_RS05030 e0cce5b5083c6456545c1f964e4a6f10 129 Pfam PF09842 Predicted membrane protein (DUF2069) 9 109 7.4E-36 T 23-04-2016 IPR018643 Protein of unknown function DUF2069, membrane MSIP34_RS11440 3819be95fca6505fdb3f673b247fef10 565 SUPERFAMILY SSF53649 236 515 1.05E-25 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 MSIP34_RS11440 3819be95fca6505fdb3f673b247fef10 565 Gene3D G3DSA:3.40.720.10 238 515 3.3E-21 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 MSIP34_RS11440 3819be95fca6505fdb3f673b247fef10 565 PANTHER PTHR30443 3 556 1.1E-19 T 23-04-2016 MSIP34_RS11440 3819be95fca6505fdb3f673b247fef10 565 Pfam PF00884 Sulfatase 238 500 6.9E-26 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 MSIP34_RS05520 85756d081b94fc957eaea17e77edfe98 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 58 9.0E-19 T 23-04-2016 IPR012451 Protein of unknown function DUF1656 MSIP34_RS05825 7d4217c2c10a76cc532c66523aab8011 185 PANTHER PTHR40547:SF1 1 181 1.2E-15 T 23-04-2016 MSIP34_RS05825 7d4217c2c10a76cc532c66523aab8011 185 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 26 177 1.6E-40 T 23-04-2016 IPR018639 Domain of unknown function DUF2062 MSIP34_RS05825 7d4217c2c10a76cc532c66523aab8011 185 PANTHER PTHR40547 1 181 1.2E-15 T 23-04-2016 MSIP34_RS05140 39337199f98c8f579235ccecf2bceedc 132 Pfam PF07769 psiF repeat 22 53 5.0E-17 T 23-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat MSIP34_RS05140 39337199f98c8f579235ccecf2bceedc 132 Pfam PF07769 psiF repeat 97 128 2.2E-19 T 23-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat MSIP34_RS05140 39337199f98c8f579235ccecf2bceedc 132 Pfam PF07769 psiF repeat 59 90 3.9E-17 T 23-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat MSIP34_RS06535 676950fae7c7efd1f61f31b650a8314a 539 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 92 240 2.8E-7 T 23-04-2016 MSIP34_RS11525 055df6865faf39723a2660d31e6451ba 205 PANTHER PTHR41729:SF1 2 197 2.5E-49 T 23-04-2016 MSIP34_RS11525 055df6865faf39723a2660d31e6451ba 205 Pfam PF13875 Domain of unknown function (DUF4202) 7 189 4.0E-68 T 23-04-2016 IPR025255 Protein of unknown function DUF4202 MSIP34_RS11525 055df6865faf39723a2660d31e6451ba 205 PANTHER PTHR41729 2 197 2.5E-49 T 23-04-2016 MSIP34_RS02740 ef04de7fdaa7bbf891166627c31180d4 176 Gene3D G3DSA:3.40.30.10 24 166 1.2E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS02740 ef04de7fdaa7bbf891166627c31180d4 176 SUPERFAMILY SSF52833 55 159 9.42E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS13960 b1e5b76b64c312335900097c0467b537 74 Gene3D G3DSA:1.10.1200.10 4 71 4.9E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS13960 b1e5b76b64c312335900097c0467b537 74 SUPERFAMILY SSF47336 1 71 1.22E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PIRSF PIRSF003085 26 391 5.5E-120 T 23-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PANTHER PTHR10108:SF795 314 391 1.1E-95 T 23-04-2016 MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PANTHER PTHR10108:SF795 26 102 1.1E-95 T 23-04-2016 MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PANTHER PTHR10108:SF795 126 298 1.1E-95 T 23-04-2016 MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 SUPERFAMILY SSF53335 127 381 2.46E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 Gene3D G3DSA:3.40.50.150 119 381 1.9E-93 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 Pfam PF02353 Mycolic acid cyclopropane synthetase 117 377 4.2E-96 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PANTHER PTHR10108 314 391 1.1E-95 T 23-04-2016 MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PANTHER PTHR10108 26 102 1.1E-95 T 23-04-2016 MSIP34_RS05975 3b4ec5cef58d7f14e03e0dab80c7b1ed 392 PANTHER PTHR10108 126 298 1.1E-95 T 23-04-2016 MSIP34_RS09235 7c4eae91a4701bfb687a9d5907320a41 442 Pfam PF04932 O-Antigen ligase 232 372 3.4E-12 T 23-04-2016 IPR007016 O-antigen ligase-related MSIP34_RS06170 1e9c401627ce447e02ce04643641bab7 64 Pfam PF11137 Protein of unknown function (DUF2909) 3 62 2.6E-20 T 23-04-2016 IPR021313 Protein of unknown function DUF2909 MSIP34_RS08090 fa0964b19db1e8bd19eaabd386803fcb 282 Gene3D G3DSA:3.40.50.1820 29 277 2.4E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS08090 fa0964b19db1e8bd19eaabd386803fcb 282 Pfam PF07859 alpha/beta hydrolase fold 62 251 1.2E-21 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 MSIP34_RS08090 fa0964b19db1e8bd19eaabd386803fcb 282 PANTHER PTHR23024 48 261 1.2E-47 T 23-04-2016 MSIP34_RS08090 fa0964b19db1e8bd19eaabd386803fcb 282 PANTHER PTHR23024:SF175 48 261 1.2E-47 T 23-04-2016 MSIP34_RS08090 fa0964b19db1e8bd19eaabd386803fcb 282 SUPERFAMILY SSF53474 23 259 6.13E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold MSIP34_RS09070 33b1ce11a6413a723618899850dfcc7c 83 Pfam PF13490 Putative zinc-finger 4 38 9.1E-8 T 23-04-2016 IPR027383 Putative zinc-finger MSIP34_RS09445 dd8c5cb740526069659ed23b3232ed26 282 Pfam PF00882 Zinc dependent phospholipase C 30 146 3.6E-15 T 23-04-2016 IPR029002 Phospholipase C/D MSIP34_RS01885 0fa997dccfbfbc98cd92b7dd1d6266cd 263 SUPERFAMILY SSF50494 200 219 5.86E-10 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS01885 0fa997dccfbfbc98cd92b7dd1d6266cd 263 SUPERFAMILY SSF50494 30 150 5.86E-10 T 23-04-2016 IPR009003 Peptidase S1, PA clan MSIP34_RS01225 1b9c71ed218b09992aa33f8c2f51a733 124 Pfam PF12279 Protein of unknown function (DUF3619) 4 121 4.0E-27 T 23-04-2016 IPR022064 Protein of unknown function DUF3619 MSIP34_RS12240 f59bf786af6fddcdcd641d00d797cffc 191 Gene3D G3DSA:3.40.50.10610 23 189 2.9E-37 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component MSIP34_RS12240 f59bf786af6fddcdcd641d00d797cffc 191 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 46 179 3.3E-10 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component MSIP34_RS12240 f59bf786af6fddcdcd641d00d797cffc 191 SUPERFAMILY SSF159594 37 187 1.39E-31 T 23-04-2016 MSIP34_RS14630 ec944e30256e4cbd9533536e1caf0434 1459 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 207 276 3.9E-22 T 23-04-2016 IPR013491 Caudovirus, tape measure, N-terminal MSIP34_RS02525 c2d0f568f830a022832f9341d049a6bb 140 Pfam PF05258 Protein of unknown function (DUF721) 16 89 5.1E-12 T 23-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 MSIP34_RS06340 50c7ad3a616ab1b9afb11852addf84aa 93 Pfam PF11154 Protein of unknown function (DUF2934) 55 89 1.6E-11 T 23-04-2016 IPR021327 Protein of unknown function DUF2934 MSIP34_RS09825 c82ef6b1bc9e1f1cf23c82cda4860fec 355 PANTHER PTHR30482:SF5 1 353 2.0E-80 T 23-04-2016 MSIP34_RS09825 c82ef6b1bc9e1f1cf23c82cda4860fec 355 PANTHER PTHR30482 1 353 2.0E-80 T 23-04-2016 MSIP34_RS09825 c82ef6b1bc9e1f1cf23c82cda4860fec 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 330 3.1E-34 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 MSIP34_RS13520 e447ac6b55260cf79e5bf9762283d2ee 178 Gene3D G3DSA:1.25.40.10 56 150 3.0E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS13520 e447ac6b55260cf79e5bf9762283d2ee 178 SUPERFAMILY SSF48452 45 153 9.11E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS06095 2292b30e1e9d22308e9fa2b8bcc2caef 127 SMART SM00530 37 93 0.0074 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 MSIP34_RS06095 2292b30e1e9d22308e9fa2b8bcc2caef 127 Pfam PF13744 Helix-turn-helix domain 33 93 1.5E-6 T 23-04-2016 MSIP34_RS06095 2292b30e1e9d22308e9fa2b8bcc2caef 127 Gene3D G3DSA:1.10.260.40 30 93 3.8E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS06095 2292b30e1e9d22308e9fa2b8bcc2caef 127 SUPERFAMILY SSF47413 27 94 8.31E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS13675 b83361f060f6f4aff9d8be23210ad08d 178 Pfam PF01863 Protein of unknown function DUF45 110 158 4.3E-9 T 23-04-2016 IPR002725 Protein of unknown function DUF45 MSIP34_RS13675 b83361f060f6f4aff9d8be23210ad08d 178 PANTHER PTHR30399:SF4 10 169 1.1E-81 T 23-04-2016 MSIP34_RS13675 b83361f060f6f4aff9d8be23210ad08d 178 PANTHER PTHR30399 10 169 1.1E-81 T 23-04-2016 MSIP34_RS09320 9f3ad8f089f73f2e092c7bc508915967 190 Pfam PF07589 PEP-CTERM motif 159 183 2.4E-6 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS00580 db60b128bb52ecdb87ad6a7d1483b781 343 SUPERFAMILY SSF53850 64 277 2.17E-16 T 23-04-2016 MSIP34_RS00580 db60b128bb52ecdb87ad6a7d1483b781 343 Gene3D G3DSA:3.40.190.10 88 250 2.9E-18 T 23-04-2016 MSIP34_RS11950 fb4ec18e166a23f8f13fb4ecf8edcdb9 99 Pfam PF05713 Bacterial mobilisation protein (MobC) 39 65 1.5E-7 T 23-04-2016 IPR008687 Bacterial mobilisation MSIP34_RS11950 fb4ec18e166a23f8f13fb4ecf8edcdb9 99 Gene3D G3DSA:1.20.1050.20 45 98 5.3E-4 T 23-04-2016 IPR013800 STAT transcription factor, all-alpha domain GO:0006355|GO:0007165 MSIP34_RS12280 5ed75069f32550d517760c17cb08b1b1 196 Pfam PF07589 PEP-CTERM motif 170 194 7.4E-6 T 23-04-2016 IPR013424 PEP-CTERM protein-sorting domain MSIP34_RS05840 ea8c46cf626235ae40846b13c118dc36 103 Pfam PF11743 Protein of unknown function (DUF3301) 3 97 4.2E-29 T 23-04-2016 IPR021732 Protein of unknown function DUF3301 MSIP34_RS12370 bcbe9d5664e04f82d7aab64e17d7f682 565 Pfam PF13520 Amino acid permease 29 494 3.2E-85 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS12370 bcbe9d5664e04f82d7aab64e17d7f682 565 PANTHER PTHR11785 346 513 1.6E-30 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS12370 bcbe9d5664e04f82d7aab64e17d7f682 565 PANTHER PTHR11785 22 142 1.6E-30 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS12370 bcbe9d5664e04f82d7aab64e17d7f682 565 PANTHER PTHR11785 167 323 1.6E-30 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS12370 bcbe9d5664e04f82d7aab64e17d7f682 565 PIRSF PIRSF006060 15 543 1.9E-77 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 MSIP34_RS11140 58472aff761dde8d7fd6d26ee36cd56c 242 PANTHER PTHR23026 18 96 5.0E-26 T 23-04-2016 MSIP34_RS11140 58472aff761dde8d7fd6d26ee36cd56c 242 PANTHER PTHR23026 157 228 5.0E-26 T 23-04-2016 MSIP34_RS11140 58472aff761dde8d7fd6d26ee36cd56c 242 Pfam PF00881 Nitroreductase family 18 220 1.7E-27 T 23-04-2016 IPR029479 Nitroreductase MSIP34_RS11140 58472aff761dde8d7fd6d26ee36cd56c 242 SUPERFAMILY SSF55469 159 240 2.36E-38 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS11140 58472aff761dde8d7fd6d26ee36cd56c 242 SUPERFAMILY SSF55469 18 93 2.36E-38 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS11140 58472aff761dde8d7fd6d26ee36cd56c 242 Gene3D G3DSA:3.40.109.10 16 239 1.4E-52 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 MSIP34_RS12870 330663551d00675e10fab65f50435626 82 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 7 46 4.6E-8 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type MSIP34_RS12870 330663551d00675e10fab65f50435626 82 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 8 45 2.4E-8 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type MSIP34_RS13055 b22ac863b419be2b242e7f6b675d94cd 177 SUPERFAMILY SSF55136 32 156 1.36E-6 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain MSIP34_RS13055 b22ac863b419be2b242e7f6b675d94cd 177 Gene3D G3DSA:3.20.80.10 31 160 7.9E-10 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain MSIP34_RS08170 45e41ab356bffc9be55ed75dccc051a5 118 Pfam PF16083 LydA holin phage, holin superfamily III 21 98 1.8E-17 T 23-04-2016 IPR032126 LydA-like holin MSIP34_RS13655 21c5dceb6cdfc0ceba74bba9bc5fee3d 78 Pfam PF11391 Protein of unknown function (DUF2798) 17 74 1.4E-18 T 23-04-2016 IPR021529 Protein of unknown function DUF2798 MSIP34_RS09680 8f71d39e986fc909da2c1c860e5d3dea 321 Pfam PF06258 Mitochondrial fission ELM1 18 304 1.2E-64 T 23-04-2016 IPR009367 Mitochondrial fission protein ELM1-like MSIP34_RS07015 e99aa5d3d02d8f13f2faa47a003cacd8 126 Pfam PF07238 PilZ domain 25 111 1.4E-9 T 23-04-2016 IPR009875 PilZ domain GO:0035438 MSIP34_RS10390 28bbaaca762a8de78e2c26728de58e87 295 Pfam PF13475 Domain of unknown function (DUF4116) 57 105 3.5E-13 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS10390 28bbaaca762a8de78e2c26728de58e87 295 Pfam PF13475 Domain of unknown function (DUF4116) 133 179 1.3E-16 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS10390 28bbaaca762a8de78e2c26728de58e87 295 Pfam PF13475 Domain of unknown function (DUF4116) 107 154 1.8E-18 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS10390 28bbaaca762a8de78e2c26728de58e87 295 Pfam PF13475 Domain of unknown function (DUF4116) 11 55 6.8E-13 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS05470 074a79adf0f19dc1d404ddbc9bf41ca6 293 SUPERFAMILY SSF56925 188 243 4.45E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS05470 074a79adf0f19dc1d404ddbc9bf41ca6 293 SUPERFAMILY SSF56925 87 154 4.45E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS05470 074a79adf0f19dc1d404ddbc9bf41ca6 293 Gene3D G3DSA:2.40.160.20 200 244 9.3E-4 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 MSIP34_RS03230 11f0c0b06b72ab23ab9d3d2458db3846 201 Pfam PF01618 MotA/TolQ/ExbB proton channel family 66 187 1.2E-33 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 MSIP34_RS03230 11f0c0b06b72ab23ab9d3d2458db3846 201 PANTHER PTHR30625 1 197 4.0E-44 T 23-04-2016 MSIP34_RS09575 d64c9d251563a661d52fc56d1d7a5ec1 519 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 68 219 3.7E-6 T 23-04-2016 MSIP34_RS09055 970d2b22a021f04e22aeae815987f896 262 Pfam PF09836 Putative DNA-binding domain 13 99 1.8E-24 T 23-04-2016 IPR018640 Putative DNA-binding domain, bacteria MSIP34_RS01165 7ee64fb54f3c82d8453b711170be3d19 234 Pfam PF11306 Protein of unknown function (DUF3108) 17 230 1.9E-31 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 MSIP34_RS10810 5491c2151e92598e1195dcc89cfd4c68 113 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 4 91 8.7E-13 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 MSIP34_RS00585 ba3c6c41739de6ee1c2db73437bc9ac9 144 SUPERFAMILY SSF46689 14 137 4.84E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 MSIP34_RS09150 df3e800b6329b84239156efa8f57a6c8 125 SUPERFAMILY SSF54534 16 103 1.18E-15 T 23-04-2016 MSIP34_RS08275 36aca6b6acbe0ec9afe333be1d78e8a1 428 Pfam PF03237 Terminase-like family 24 409 5.5E-53 T 23-04-2016 IPR004921 Terminase, large subunit MSIP34_RS06015 de80a4c94434c9787191af55d5b19a6f 74 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 66 3.2E-25 T 23-04-2016 IPR021074 Formate dehydrogenase, delta subunit MSIP34_RS10120 ff0f7f961600ff6aab2b87f7abbb7586 462 Pfam PF09822 ABC-type uncharacterized transport system 41 261 6.5E-32 T 23-04-2016 IPR019196 ABC-type uncharacterised transport system MSIP34_RS10120 ff0f7f961600ff6aab2b87f7abbb7586 462 Gene3D G3DSA:3.40.30.10 50 116 2.2E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold MSIP34_RS10120 ff0f7f961600ff6aab2b87f7abbb7586 462 SUPERFAMILY SSF52317 149 397 6.87E-24 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like MSIP34_RS01200 523ce26ceee88d2e1afde9798daf02a6 333 Pfam PF01699 Sodium/calcium exchanger protein 194 332 3.6E-10 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 MSIP34_RS01200 523ce26ceee88d2e1afde9798daf02a6 333 Pfam PF01699 Sodium/calcium exchanger protein 6 160 2.1E-16 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 MSIP34_RS02000 ac988329d769c5a5a603b2b3feb58f7c 110 Pfam PF11191 Protein of unknown function (DUF2782) 26 110 2.6E-32 T 23-04-2016 IPR021357 Protein of unknown function DUF2782 MSIP34_RS02170 5cde4680216caf92bfbf45916ca11911 120 Pfam PF11804 Protein of unknown function (DUF3325) 9 110 2.2E-24 T 23-04-2016 IPR021762 Protein of unknown function DUF3325 MSIP34_RS07530 fc08bdd5a59af3f7de3b54e3d52dc15c 247 Pfam PF08861 Domain of unknown function DUF1828 31 120 1.9E-16 T 23-04-2016 IPR014960 Domain of unknown function DUF1828 MSIP34_RS13070 afda87451edde45c5e6b4c64f31609b1 126 Pfam PF07681 DoxX 7 89 1.2E-8 T 23-04-2016 IPR032808 DoxX family MSIP34_RS06560 23432a1fd59829abcf86d071d3b86bc3 123 SUPERFAMILY SSF54909 1 96 3.45E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel MSIP34_RS06560 23432a1fd59829abcf86d071d3b86bc3 123 Gene3D G3DSA:3.30.70.900 1 92 4.6E-30 T 23-04-2016 MSIP34_RS03850 82021b638b46fb9b33880c2a490ca3fa 373 Pfam PF02120 Flagellar hook-length control protein FliK 306 370 4.5E-13 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal MSIP34_RS07770 2416f45dc2b8fbc17dae0c3845a2ed1d 94 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 5 92 22.27 T 23-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 MSIP34_RS07770 2416f45dc2b8fbc17dae0c3845a2ed1d 94 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 90 7.3E-13 T 23-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 MSIP34_RS07770 2416f45dc2b8fbc17dae0c3845a2ed1d 94 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 12 91 9.5E-33 T 23-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 MSIP34_RS06250 42fc067bb0dde9d0819b99bcabb3d280 158 Pfam PF13511 Domain of unknown function (DUF4124) 10 62 3.0E-14 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 MSIP34_RS12630 2207127f853cea5de6feb4efddb0c186 153 Pfam PF11948 Protein of unknown function (DUF3465) 38 153 6.4E-49 T 23-04-2016 IPR021856 Protein of unknown function DUF3465 MSIP34_RS09585 927bfc743cab67593d36e9b9fade41e2 231 SUPERFAMILY SSF56112 48 222 3.21E-12 T 23-04-2016 IPR011009 Protein kinase-like domain MSIP34_RS08555 ee399b8be523021461c85fe9b9daeac1 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 4.8E-23 T 23-04-2016 IPR019201 Protein of unknown function DUF2065 MSIP34_RS03800 cf63e30e1b803072e2eb6d06f4c427c9 325 SUPERFAMILY SSF53300 252 282 4.3E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS03800 cf63e30e1b803072e2eb6d06f4c427c9 325 SUPERFAMILY SSF53300 37 159 4.3E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A MSIP34_RS11870 ee3d1d56c8a968579ab4c4c5431317b7 1312 Gene3D G3DSA:3.40.50.300 285 371 1.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS11870 ee3d1d56c8a968579ab4c4c5431317b7 1312 SUPERFAMILY SSF52540 283 449 9.51E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase MSIP34_RS00095 3640d7bf9bc8348582bf4d6d7f81775b 23 Hamap MF_00656 Coenzyme PQQ synthesis protein A [pqqA]. 1 23 11.926 T 23-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 MSIP34_RS00095 3640d7bf9bc8348582bf4d6d7f81775b 23 TIGRFAM TIGR02107 PQQ_syn_pqqA: coenzyme PQQ precursor peptide PqqA 2 22 2.2E-12 T 23-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 MSIP34_RS00095 3640d7bf9bc8348582bf4d6d7f81775b 23 Pfam PF08042 PqqA family 1 19 1.3E-10 T 23-04-2016 IPR011725 Coenzyme PQQ biosynthesis protein A GO:0018189 UniPathway: UPA00539 MSIP34_RS12930 faebcbbeaacf7ae9a3d2375234a8fbef 267 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 133 227 3.6E-12 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 MSIP34_RS02030 3201727a76e7eee112bd9c64604c0ed6 174 Pfam PF13689 Domain of unknown function (DUF4154) 32 168 3.0E-35 T 23-04-2016 IPR025293 Protein of unknown function DUF4154 MSIP34_RS07090 947674d8ad46ceb26e0f54966bef1776 478 Pfam PF13598 Domain of unknown function (DUF4139) 361 478 4.4E-10 T 23-04-2016 IPR011935 Conserved hypothetical protein CHP02231 MSIP34_RS07090 947674d8ad46ceb26e0f54966bef1776 478 PANTHER PTHR38075 2 478 1.4E-49 T 23-04-2016 MSIP34_RS05325 7447aed7a34092a0c05225417ba4af2c 175 Pfam PF11684 Protein of unknown function (DUF2380) 28 143 5.1E-12 T 23-04-2016 IPR021698 Protein of unknown function DUF2380 MSIP34_RS11205 2839c4885b703f34342024ee925255c5 221 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 3 208 6.1E-32 T 23-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 MSIP34_RS10475 deccbb50936a5180460703b81cdc3023 734 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 31 637 1.4E-107 T 23-04-2016 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY MSIP34_RS03405 815126faf8b0178874605cb486f5bf80 308 Pfam PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 49 173 1.2E-6 T 23-04-2016 IPR004456 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GO:0003824|GO:0046537 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 MSIP34_RS03650 2d83a74b61b3eaad17e565708c2aa0ff 86 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 9.0E-32 T 23-04-2016 IPR021250 Protein of unknown function DUF2789 MSIP34_RS04725 6b7ab263195b1ab7749c634de7d12e14 174 Pfam PF13689 Domain of unknown function (DUF4154) 30 165 1.6E-34 T 23-04-2016 IPR025293 Protein of unknown function DUF4154 MSIP34_RS11565 36e740e8eccfd63b1f4229e146bc14fe 88 Pfam PF11391 Protein of unknown function (DUF2798) 25 82 1.7E-20 T 23-04-2016 IPR021529 Protein of unknown function DUF2798 MSIP34_RS12165 d18768468e7f621315f0a387afffc564 337 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 68 156 6.5E-5 T 23-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 MSIP34_RS11555 b0b01ad9b6fd489ec7db4efa18caddc8 121 Pfam PF02656 Domain of unknown function (DUF202) 5 82 1.5E-13 T 23-04-2016 IPR003807 Domain of unknown function DUF202 MSIP34_RS01230 edeab510e0b44d92cc093d35f6e1c047 148 Pfam PF11304 Protein of unknown function (DUF3106) 32 134 5.3E-34 T 23-04-2016 IPR021455 Protein of unknown function DUF3106 MSIP34_RS03795 e6195a255e00049a60967d5f0b96a6e4 195 SUPERFAMILY SSF48452 47 155 2.09E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 MSIP34_RS09660 46ad41a0af60081a75bd38aa48e5747c 422 Pfam PF04932 O-Antigen ligase 201 354 5.9E-14 T 23-04-2016 IPR007016 O-antigen ligase-related MSIP34_RS11600 c26d80d58db86c1330093021c6092cd1 294 Pfam PF11231 Protein of unknown function (DUF3034) 37 290 5.4E-105 T 23-04-2016 IPR021393 Protein of unknown function DUF3034 MSIP34_RS10420 b08c77d6ab3ab1e74936f3b4dd075d2c 256 SUPERFAMILY SSF53335 22 217 2.7E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase MSIP34_RS08365 9a9dc71be4dc81e8365b00e50a3ee6b2 123 Gene3D G3DSA:1.10.260.40 44 83 5.3E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS13730 3ac4de69503fb41f28782f1f908174de 63 Pfam PF14070 Putative motility protein 7 62 2.2E-16 T 23-04-2016 IPR025906 Putative motility protein MSIP34_RS09225 c80735b8eabf6a225ed1383d8d050f4d 138 Pfam PF04138 GtrA-like protein 16 134 3.6E-14 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 MSIP34_RS08450 3a1f45fd0d54af5928c0069605f46811 159 Pfam PF07799 Protein of unknown function (DUF1643) 12 146 3.2E-41 T 23-04-2016 IPR012441 Protein of unknown function DUF1643 MSIP34_RS13465 b124cf9fab8455b23dc17a27c353d3d0 78 TIGRFAM TIGR03510 XapX: XapX domain 3 49 1.4E-16 T 23-04-2016 IPR020017 XapX domain MSIP34_RS14645 0cead5d8e578fa8d370019895a7dbe52 336 Pfam PF07120 Protein of unknown function (DUF1376) 1 88 1.3E-8 T 23-04-2016 IPR010781 Protein of unknown function DUF1376 MSIP34_RS07500 8e35fce1bffa265b1c885a5b68aa45df 78 Gene3D G3DSA:1.10.260.40 14 43 2.9E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS07500 8e35fce1bffa265b1c885a5b68aa45df 78 SUPERFAMILY SSF47413 13 50 7.95E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 MSIP34_RS13330 cbeb8cc35e11817810f5ea36bb904f8d 130 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 16 127 1.0E-14 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III MSIP34_RS09490 1f16101e44abdf9ff6e30a76b4d2097d 150 Pfam PF13664 Domain of unknown function (DUF4149) 11 109 4.1E-21 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 MSIP34_RS12810 3c16b88382c0086e81e9c42061aab01b 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 7 68 1.1E-22 T 23-04-2016 IPR018684 Protein of unknown function DUF2171 MSIP34_RS12540 4f4947cf084ffcb664675c80e9196f9a 163 Pfam PF13511 Domain of unknown function (DUF4124) 10 71 7.2E-8 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 MSIP34_RS08280 39a8c1f5c0ef528a01e04ca0c6daebfa 160 Gene3D G3DSA:1.10.10.700 32 86 5.4E-8 T 23-04-2016 MSIP34_RS08900 37936e2ee56d6998035b038c592c8862 227 Pfam PF13852 Protein of unknown function (DUF4197) 25 223 2.0E-78 T 23-04-2016 IPR025245 Protein of unknown function DUF4197 MSIP34_RS04805 f74bf40f972b69487611fb394106a7bb 196 Pfam PF11776 Nickel/cobalt transporter regulator 160 188 2.6E-6 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB MSIP34_RS12290 d9f61309fade83d8e90268136d9fa86d 172 Pfam PF06271 RDD family 3 161 2.8E-25 T 23-04-2016 IPR010432 RDD MSIP34_RS08225 626af9e5824e6b687930df9229054ec3 135 Pfam PF13554 Bacteriophage related domain of unknown function 5 129 2.1E-38 T 23-04-2016 IPR025395 Protein of unknown function DUF4128 MSIP34_RS10410 4e33686c8cea1e6c548956ba35cbb1ac 195 Pfam PF13475 Domain of unknown function (DUF4116) 18 66 2.0E-10 T 23-04-2016 IPR025197 Domain of unknown function DUF4116 MSIP34_RS06670 97082547b15184bf66d6a4855b74d44b 233 Pfam PF10099 Anti-sigma-K factor rskA 62 228 1.9E-23 T 23-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 MSIP34_RS00995 5704f891444f78b5b7871cc6769d1786 196 Pfam PF14334 Domain of unknown function (DUF4390) 35 191 1.8E-57 T 23-04-2016 IPR025500 Protein of unknown function DUF4390 MSIP34_RS11875 b59a5b7f776c096dd179b4adc347eae9 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 193 242 4.6E-11 T 23-04-2016 IPR007136 Protein of unknown function DUF347 MSIP34_RS11875 b59a5b7f776c096dd179b4adc347eae9 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 138 188 2.0E-13 T 23-04-2016 IPR007136 Protein of unknown function DUF347 MSIP34_RS11875 b59a5b7f776c096dd179b4adc347eae9 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 73 120 1.1E-13 T 23-04-2016 IPR007136 Protein of unknown function DUF347 MSIP34_RS11875 b59a5b7f776c096dd179b4adc347eae9 252 Pfam PF03988 Repeat of Unknown Function (DUF347) 18 68 1.6E-18 T 23-04-2016 IPR007136 Protein of unknown function DUF347 MSIP34_RS00685 e76432393a6d6a54576e8ff47fa1cc89 393 Pfam PF04230 Polysaccharide pyruvyl transferase 60 287 1.4E-18 T 23-04-2016 IPR007345 Polysaccharide pyruvyl transferase MSIP34_RS06375 3897488acd31b6a3ce297e7783d8cfa2 179 Pfam PF07813 LTXXQ motif family protein 57 150 3.2E-9 T 23-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 MSIP34_RS08415 733b547ee166c682708e24bd9e7f30c8 267 Pfam PF12705 PD-(D/E)XK nuclease superfamily 11 263 7.9E-13 T 23-04-2016 MSIP34_RS04970 6244c158716e2ecbc398862b5d52ab80 160 Pfam PF06146 Phosphate-starvation-inducible E 76 144 1.1E-8 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like