LCP49_RS00030   10905 ..   10927 +   -22  -3.22476   GTACCACACGAGGAA           GGCCCCCGCC GTC GGCGGGGGCC           TTCCTCGTGCCTGGT  95 66
LCP49_RS00065   18088 ..   18098 +  -6.8  -3.57144   CGGCCTGGTCCGCGT                 CCGA CCC TCGG                 TTTGCCGCTCACACC  57 108
LCP49_RS00070 NONE
LCP49_RS00075   23598 ..   23637 +   -10  -2.72344   GTCGACGGCGGCGGG  GTCGCCCGTGAAG-CCG GTGCCGG CGGCCTTCACGAGCGCC  TCCTTCCGCGTCCAC  54 152
LCP49_RS00095 NONE
LCP49_RS00100   29100 ..   29118 +    -3  -3.30124   GCGCACGGGCCGGTC             CACGGG CTGCTCC CCCGCG             TTGTCCGGGATCCGG  47 407
LCP49_RS00110   30570 ..   30586 +  -7.2  -3.30124   GGCTCTCCGCTCCGG              CGGCGC AGCCC GCGCTG              TTCTGACCCGTCCGC  53 3
LCP49_RS00120 NONE
LCP49_RS00125   32972 ..   33001 + -25.1  -3.39327   CCCGGACACGCAGAA       GGGGCGGGGATCC ACGC GGATCCCCGCCCC        TTCTGCGTGTCCGGA 100 64
LCP49_RS00150 NONE
LCP49_RS00160   38228 ..   38246 +  -6.6  -2.80816   TGCAGCAGACCGTCC             ACGGGGAC CTG GTCCTCGA             TCTCCTCGCTCAGCG  48 521
LCP49_RS00180   42448 ..   42465 +  -2.5  -2.78384   CCGCTCGGGTCAGCT             CCGCGGC CTCG GCCACCG              TCTCCTGCCAGCCGA  39 517
LCP49_RS00190 NONE
LCP49_RS00195   44102 ..   44134 + -12.6  -3.14132   GGTCAGCCGCGGCGG     CCGCGGCGCTCCGCC TGAC GGCGG-GAGCGGCGG      TTCGTGCCCGCCGCG  65 126
        folP NONE
LCP49_RS00265 NONE
LCP49_RS00270 NONE
LCP49_RS00275 NONE
LCP49_RS00280   64273 ..   64295 +  -5.4  -3.40403   CCGGGTGCTGGGAGA           GGTGGGCGTC GAG GGCGCGCAGC           TTCTGCTCCGCCAGG  52 247
LCP49_RS11605 NONE
LCP49_RS00305   69557 ..   69602 +  -5.1  -2.99207   GCGGGCCGTCCTCGT GCGCCCCGGCCCGGTGCCCCTC CCG GACGCGCCCCGGCCCCCG-CGC TCCTTTGGTACTGTC  45 85
LCP49_RS00310   71161 ..   71196 + -23.4  -3.50853   CCGGGCCCGGGCATG    CGAGAAGGCCCCCAGC AGAT GCTGGGGGCCTTCTCC     TTCTCGTTGCGGGGG 100 109
LCP49_RS00330   77394 ..   77433 + -29.4  -2.62184   CTCCCGGCACGACGG  CGGCGGGCGGTCCGGCACC TCG GGTGC-GGGCCGCCCGCCG  TCGTGTCAGCCCGCG 100 45
LCP49_RS00340 NONE
LCP49_RS00365   85518 ..   85540 +  -6.1  -3.05844   CTTGAGCTCGAGGTC           GCGGCCCCG CGGCA CGGCGCCGG           TCTTCCAGTCGACGA  48 189
LCP49_RS00385   93887 ..   93902 +  -2.4  -2.62184   TACACGGGGCCGAGC              GGGGCC AGGT GGTCCA               TGATCTCGGCGGAGC  39 493
        brnQ NONE
LCP49_RS00405   98450 ..   98486 +    -8  -3.14344   CCGCCCACCACGCCC   GCCCGGTAG-GCTCCCCG CCA TGGGGAACACT-CTGGGC   TTCCTGCGCGGCGTC  53 106
LCP49_RS00410   98818 ..   98864 +    -5  -2.87931   AGCACTCCGGCCGCA TCCG-GC-GTGGGGGCCGTCCC GAGCA GGGGCAGACCCCGCCGCGCGCA TGTGTCCCGGGTCGG  45 93
LCP49_RS00445 NONE
LCP49_RS00450  107774 ..  107789 +    -6  -3.53224   ACGCGCCGCGCTGAC              CCGGCC GTCC GGCCCG               TTTCGCCCGCGGGTG  54 27
LCP49_RS00455  108124 ..  108154 + -26.2  -2.62263   GCCTCTTGACCCGCC       CGCACGCCCCGGTG ATC CGCCGGGGCGTGCG       TCGTCTCGGCCCCCT 100 32
LCP49_RS00460  109875 ..  109908 +  -7.9  -3.06183   GCGCCCGGCCCGGTT     CCACGGGGCGCCGCC CGTC GGCCGCTCCGCGTGC      TTGCCTCGCGATCGG  53 149
LCP49_RS00465  111884 ..  111916 + -13.4  -2.70932   CTTCTGCGCGAATGA      CCCTTCTGACCGCC TGCGC GGCGGCTGGAAGGG      TCATTCGCGCAACCG  61 65
LCP49_RS00475 NONE
LCP49_RS00480  116461 ..  116481 +  -6.7  -3.05384   GCGGTGTCCGCCTCC            GGAGTGGGC CGG GCCGACGCC            TTGGCTCCGCCGGGG  48 162
LCP49_RS00490 NONE
LCP49_RS00495 NONE
LCP49_RS00500  120635 ..  120672 + -13.4  -2.87132   TGCGGCGGCGCCGCC  CACGG-CGGCCGC-CCCG GCGG CGGGCGCGGTCGACCGGG   TCTGTGCGGCGGCAC  63 215
LCP49_RS00515  122993 ..  123009 + -11.5  -3.25823   GGCACTCCTTGAGCT              CGCGGGC CTC GTCCGCG              TTGATCTCCAGCACG  63 142
LCP49_RS00535 NONE
LCP49_RS00540 NONE
LCP49_RS00545  127074 ..  127108 +  -7.7  -3.01712   GGGCCTCGGAGAAGT     GGGCGGTGGCCCG ATGAGTGCC CAGGCCTCCGTCC     TCTTCGACGCCCCGG  49 9
LCP49_RS00550  128315 ..  128363 + -10.8  -3.28712   GTCCCAGTCCACGCC GGCCC-CCTCCAGCACCGCGCGC ACGT GCGCGTGGGCCTGGTCGAGGGTC TTGTCCGGAGCGAAC  63 366
        dapD  130255 ..  130273 +  -7.3  -3.54935   TCCCTCCCCGTTCCC             CGCCGCG TTCCT CGCTGCG             TTTGGGGGCGATTTC  57 73
LCP49_RS00565  131958 ..  131974 +  -7.9  -3.97139   GGCCGAAGCCCATCA              GGCGGAC GCC GTCCTCC              TTGTTCTTCACCTTC  69 499
        zupT  146415 ..  146425 +  -6.8  -2.70932   CGGTGATCCGGTCCC                 CCAC GTT GTGG                 TCGTTGACCAGGCGG  47 127
LCP49_RS00635 NONE
LCP49_RS00645  150265 ..  150291 +  -2.1  -2.79183   GTCCCCCACGGGACC        G-GGCCGGTGCG TGTC CGTCCCCGCCGC         TATGCTCGACCTGCG  40 81
LCP49_RS00650  151722 ..  151735 +  -4.5  -3.28712   ACGCGAAGTGGCCGG               CC-GCG CGC CGCAGG               TTCTGCAGCAGGAAG  48 445
LCP49_RS00660 NONE
        nadA NONE
        nadC NONE
LCP49_RS00675 NONE
LCP49_RS00680  158775 ..  158794 +  -9.2  -3.25823   TCACGCAGAAGGACT            GGTCCTCC GTGG GGAGGTCC             TTGATGTCCGCCAGG  58 484
LCP49_RS00705  163417 ..  163434 +  -4.1  -3.10732   AGCGCACGACGACGT             CGCTC ATCTCCTC GAGCG              TCTTGCCCTTGGTCT  46 170
LCP49_RS00715 NONE
LCP49_RS00720 NONE
        arfB  168727 ..  168779 + -15.3  -3.36492   CACGCGCCGCCGCCC CGGCCTCGACTGAGGCCGCTCGCCC GCC GGCCGCGCGGGCTCAGACGCGGGTG TTCTGCGATTCCGGG  76 13
LCP49_RS00735  171154 ..  171179 + -13.2  -2.82623   CGCCGGCGGCCACCA         CCGGCCCGGC GAAGCG GCCGAGCCGG          TCCTTGTACGCCACG  63 137
LCP49_RS00750  176300 ..  176339 +  -2.8  -3.21218   CCCGCCGAGGCCGAG  GCGGGCGGCGGTCTG CGAGAGGGGGA CGGACTGCCGAC-GC  TTCGTCATCACGCCT  46 519
LCP49_RS11610  177643 ..  177675 +  -3.9  -2.82516   ACCAGTTCACCGGAC      CGCGCAGGCTCTGCG GGG TGGAGAACCGGCGGG      TGTAGTGCTCCGCCC  44 299
LCP49_RS00795 NONE
LCP49_RS00800 NONE
LCP49_RS00805 NONE
LCP49_RS00810 NONE
LCP49_RS00815 NONE
LCP49_RS00820 NONE
LCP49_RS00825  188053 ..  188068 +  -5.4  -3.31144   GCGGGCGTGCAGCTC              GG-CGAG GTC CTCGGCC              TTGTAGCCGTCGGAG  50 405
LCP49_RS00845 NONE
LCP49_RS00850 NONE
LCP49_RS00855 NONE
LCP49_RS00860  193101 ..  193114 +  -3.7  -3.23393   CAGACGGACCCCTGC               GGTGC CCTG GCCCC                TGTTCTGAGGTGGAA  47 415
LCP49_RS00900 NONE
        rmuC  201273 ..  201295 +  -5.5  -3.70902   GGGCCTGGCGGGTGG          GACGTCG-CG GCCC CGACGTCGTC           TTTCCGTGTCCCAGG  61 55
LCP49_RS00910  203482 ..  203506 +    -7  -2.70932   CACGCGCTCGGCGCG          GGTGGCCCCG TACTC CGCGGCGACC          TCCTTGAGGCGCACC  47 425
        xseA NONE
LCP49_RS00930  207330 ..  207369 + -22.8  -3.14564   GCTTTCGTTCGAGAA  ACGGCG-GGGGCGGGGGCC GAC GGCCCCCGCCCCACGCGGC  TTGCTCCCGACGTCG  93 116
LCP49_RS00960 NONE
LCP49_RS00980 NONE
LCP49_RS00985  218215 ..  218265 +    -9  -2.82193   GCCCGGGGCGTCCGC CCGGCG-CGG-G-CCGC-GGCGGCAC GGC GCGCCGTCAGCGGACATCGTCGTCGG TCTCGTCCGTCTCGT  53 244
LCP49_RS01025  229941 ..  229957 +  -3.5  -3.28712   CCCCGTACTCCACCA              GGCCCCG CAC CGTCGCC              TTCTCGACGGCGGCC  47 260
LCP49_RS01045  235503 ..  235540 +  -6.9  -3.28712   CACGGAACCTGGAAA   CACGC-GGGTCCTGCC CCCGGAA GGCGAGACCCGGCGGG   TTCTGCCCACGGAAC  53 112
LCP49_RS01075 NONE
LCP49_RS01080 NONE
LCP49_RS01085 NONE
LCP49_RS01090 NONE
LCP49_RS01095  246506 ..  246562 + -10.9  -2.78384   GGCGGTCCTGGTCGT CCT-GGACGGCGTCGCCG-AGGCGG-CGC AGC GCGGCCTCCTGCGG-GGTGCCGGCCCAGG TCTGCTCGGCGGCGC  57 375
        coaA NONE
LCP49_RS01170  262180 ..  262195 +    -4  -2.79289   CCTGTACCGCGCCGC              CCT-CGT CAC ACGTAGG              ATTCTTCCCATGCTC  42 60
        mscL  262650 ..  262685 + -22.6  -3.39895   CTGTCCGACGCCGAA    GGGCCCGGGATGACTC ACGC GAGTCGCCCCGGGCCC     TTCCTTCATGCCCGC 100 48
LCP49_RS01190  265495 ..  265510 +  -6.8  -3.52539   ATGGCGGATGGCCTC              GAGGCG GGCG CGCTTC               TTGTCGTTCGACTTC  57 244
LCP49_RS01435  304720 ..  304732 +  -4.7  -3.24747   GTCCGCCACCTCGGC                GCCGG AGG CCGTC                TTGGTGATGTAGCCG  48 427
LCP49_RS01450 NONE
LCP49_RS01455 NONE
LCP49_RS01460  309564 ..  309621 +  -6.9  -2.78384   GCGCCCGCCTCATGG TG-CTG-GG-CCGCGGCGGTGACCGTCC CCACC GGACGGGCGGCGGCGCGGGCCTCGGGCG TGTCCTCCGCCGGCC  47 238
        mshD  313301 ..  313326 +   -14  -2.67515   AGACCCTCGGGCGGG         GGCCGGCCGGG CACAT CCCGGC-GGCC         TCGTATCCTGGTGGG  64 40
LCP49_RS01485 NONE
LCP49_RS01490 NONE
LCP49_RS01495 NONE
LCP49_RS01500 NONE
LCP49_RS01505 NONE
         asd  317780 ..  317826 +  -2.8   -4.4078   CGGCAACCTCTGAGC CGCGACGCCGGCGCGGCGGCGCG CACC CG-GCC-CAGCCCCGGCC-CACG TTTTCGTTCGGGAAA  70 28
LCP49_RS01550  324150 ..  324160 +  -2.4  -2.70932   GCAGGGCGGTCTCCC                 GGTC CAG GCCC                 TCCTTCACCGACAGC  39 299
LCP49_RS01570  329315 ..  329370 +  -9.5  -3.10796   CCCGGCCGACCACCG CGCCCACTGACGCGACGCCGGGCCGGC CAAG GCCGTGCCGGCG-CGC-TCGGGCGGCC TCTTCGCTCCTGCAC  56 16
LCP49_RS01575  330174 ..  330208 + -10.7  -3.21099   CCGTGGCGAACTCGC    GGACGGCGTCCA-CGG TGAG CGGCTCGACGCCGTCC     TTCATGATCACGCAG  61 205
LCP49_RS01590 NONE
LCP49_RS01595  333484 ..  333508 + -16.4  -3.08464   CCTCCCGCCACGGAA          CCCCGCGCCC GCTCA GGGCGTGGGG          TTCCGTGCGTCGTAG  74 201
        rarD NONE
LCP49_RS01615 NONE
LCP49_RS01620  338909 ..  338933 +  -9.2  -3.01712   AGCGCGCCGAGCATG         CCGGC-CGCGG CGAT CAGCGAGCCGG          TCTTGCCGGAGAGCA  54 523
LCP49_RS01655  348609 ..  348642 +  -8.8  -3.31792   GCGGCTGACGGTGTC     GTTGACCGCGG-CGG TGAGC TCGTCCGCGGACAGC     TTCTCCGCGTGCTCG  58 470
LCP49_RS01675 NONE
LCP49_RS01685  355583 ..  355617 +   -33  -2.62184   CTGACCCGCCACCCC     CGACGGCGGCGCACCG GGC CGGTGCGCCGCCGTCG     TCGTGTGCGGCGCGG 100 37
LCP49_RS01690  358048 ..  358083 +  -5.2  -2.88663   CGCGGAGGAGGCGGG    CGGCTCACCCCCGCCT CGCC AGGCGGGCCTAGGGCG     TGTCTGAGAATAGAT  44 153
LCP49_RS01695  359263 ..  359275 +  -3.3    -3.254   GGCGACGCTCGCGGT                GCCGA CAG TCGGG                TGTTGTAGATGCATG  47 268
LCP49_RS01715  363760 ..  363773 +  -2.3  -3.57263   ATCGACTTCTCCCTC               TTCCG CGAC CGGAC                TTTCACCGTCGCCAT  52 133
LCP49_RS01725 NONE
LCP49_RS01730 NONE
LCP49_RS01735  368036 ..  368048 +  -3.3  -3.24747   CATGGTGGTCAAGAT                CGCCA CCG TGCCG                TTCATGCTCTGACCG  47 1
LCP49_RS01740 NONE
LCP49_RS01745 NONE
LCP49_RS01755  371474 ..  371493 +  -6.3  -3.29144   GGAACGCCCACGAGC            GCTCGCC CGCCGC GGCGCGC             TTCTCCGCACGGTCC  52 388
LCP49_RS01785  377289 ..  377326 + -28.6  -2.78384   GATCGCCGTCCACGA   CGAAGCCGCCGTCCCC CCGGAA GGGGACGGCGGCTTCG    TCTCGTCAGCGCCCG 100 332
LCP49_RS01805 NONE
LCP49_RS01810  381249 ..  381274 +  -3.1  -3.37796   CGAGGTCGCCCATGC         CGCCGTCCAGG AACG CCTCCACGGCC          TTCTCGGTGGTGCCG  49 121
LCP49_RS01845 NONE
LCP49_RS01850  393300 ..  393337 +  -4.8  -3.01924   CCGCGCGGGCGCCCT  CCCGCGGGTCATGACCGG TCCT CCGGTGA-GGCG-GCGGG   TGTTCCGGGCCGCTG  45 373
LCP49_RS01885  399330 ..  399369 +  -4.9  -3.65046   CTCGCCGTCGTGCCG GGCCAC-GAGCTCCTG-GG ACAG CCGCAGGATCGCCGAGGCC  TTGTTCCGGTAGAAC  58 515
         acs  402090 ..  402111 +  -2.1  -3.28712   CCCCCGGGTGCGGAT           GGTGC-CGTG CGC CTCGAGCTCC           TTGTAGGCCCGGGCC  46 272
LCP49_RS01920  406633 ..  406658 +  -5.3  -2.73875   GCATCCGGGGGGTGC         CGTCGTCGCCG GCCT CGGTGACCAGG          TGGTATTCCGGCACG  44 102
LCP49_RS01940 NONE
LCP49_RS01945 NONE
LCP49_RS01950 NONE
LCP49_RS01955  415118 ..  415135 +    -4  -3.55444   ACTCACTCGCCTGAT             GGGCCC CGGGCC GGGCAC              TTTCGAACGTGAGAG  50 27
LCP49_RS01975  419089 ..  419125 +   -10  -3.71848   CAGGTGCGTCTTCAC    GGTGGCCTCGGAGATG AACAG CTCCTTCGCGGCCACC    TTGTTCGTGGCGCCC  69 164
LCP49_RS01990 NONE
LCP49_RS01995 NONE
LCP49_RS02000  424346 ..  424398 +    -6  -2.78384   GGGGGACGTCCTACC GGC-CGTCGAGGCGCGGG-CGTGACC ACC GGCTCCGTCCCGCGCCGCCGGGTGCC TGTCGTCGAGGGCCA  45 4
LCP49_RS02005  424793 ..  424821 +  -5.2  -3.21099   CGGCAGTCCTCTCGG       CGGCACCGACCGT TCGA ACG-TCGGCACCG        TTCCTCGTCGCGGGA  49 53
LCP49_RS02010 NONE
        purF NONE
        purM  428211 ..  428234 +  -7.3   -4.4078   GATGCGCGGCCAGTA          CGCCGCCTG ACCCCC CGGGGGGCG           TTTTCGTTCGGGAAA  78 16
LCP49_RS02040  432478 ..  432490 +  -6.9  -3.63068   TCCGTCTCACAGATG                CCGTC GGG GGCGG                TTTCGGGTGGTATCC  60 55
LCP49_RS02050  436678 ..  436699 +  -3.5  -3.14132   CAGGGCGATGTGGGC           CGCGTCCGG CACG CCGGGCACC            TTCGTGAAGGCCGCC  45 204
LCP49_RS02060 NONE
LCP49_RS02065 NONE
LCP49_RS02070  440198 ..  440225 +    -9  -3.62522   CTGCACCTTGGCGTC        GCG-GGCGCCCTC GAT GCGGGCGGCGCGC        TTCTTGGCGGCCTTG  66 257
LCP49_RS02080 NONE
LCP49_RS02085 NONE
        trmB NONE
LCP49_RS02120  450643 ..  450664 +  -7.9  -2.78384   GCGCGCAGCACGCCC           GCCCGCGTGC CGT GC-CGCGGGG           TCTCCTCCCGCGCCC  49 335
LCP49_RS02130 NONE
LCP49_RS02135  453818 ..  453836 + -10.2  -3.12999   GGCCGGGCGCCGGGA             CCGGAGCG GTA CGCTCCGC             TTAGGTGTAGCATCG  59 88
LCP49_RS02140  457205 ..  457244 + -30.1  -2.78596   TGACCGCCCCCGACT  GATGCCCGCCCCCGGCC CCGATC GGCCGGGGGCGGGCGTC   TATCCTGGGCGGATG 100 38
LCP49_RS02145 NONE
LCP49_RS02150  458636 ..  458675 + -30.8  -2.62616   CCGCCACCACCACGA  CGACGGCCGCCGCCCGGA GGGA TCCGGACGGCGGCCGTCG   TGCTATGCGGGGTGG 100 47
LCP49_RS02200  469200 ..  469219 +    -7  -2.71744   TCAATGACGACGCGG            GGCCGGTC GCAC GGCCGGGC             TGGTGTATGGTGGTG  47 59
LCP49_RS02205 NONE
LCP49_RS02215  471673 ..  471706 +  -5.9  -2.78384   GCGCCCCGACCGGCG     CGGGCCTCGGCGA TCGCCTCC TCGCTGGGGATCG      TGTACTGCACGCCGC  46 505
LCP49_RS02295 NONE
LCP49_RS02300  487474 ..  487496 +  -5.5  -2.83164   CCACCGGTTGCGGTC          CGCGAACTGC ATGT GCAGG-CGCG           TCTGCTCGTCCATGG  45 177
LCP49_RS02330 NONE
LCP49_RS02335  495251 ..  495269 + -11.6  -2.74012   TCCGGCCTCGTCCGC             GGCCGCGG CCT CCGCCGCC             TGCTTGGCCTGCTGC  57 138
        hisD NONE
LCP49_RS02350  498607 ..  498646 +  -2.7  -3.56325   GCCGTCGTGATGGCG  GCCTCATGCGGAGGGTGC GGTCA GCACCATCCGGAAC-GGC  TTGTCATTGTCCACC  49 70
LCP49_RS02360  500237 ..  500268 +  -9.4  -3.01791   CCGCCATCTTCACTG      CTCGTCAGC-CCGGC ATC GCCGGCGTCGATGAG      TGTTGGGCAAGCGGT  55 128
LCP49_RS02365  500599 ..  500632 + -29.7  -2.64794   CTGACGCACGGCTTC     CGACGCCCCCGGTCC GCAC GGACCGGGGGCGTCG      TCGTGTGCGCTTCCG 100 48
LCP49_RS02390  509701 ..  509738 +  -2.7  -3.14132   GGAGCGAGGACTGAC   GGCGCTCCATCCCCTT CAGGTCC GAGGCGATG-AGCGCG   TTGATCCAGCGGGCG  44 146
LCP49_RS02400 NONE
LCP49_RS02405  513822 ..  513838 +  -3.5  -2.94099   CTGCGCCCCCGGGGC              CCGGCCG GGG CGGGAGG              TCTGTGATGACGCCG  43 2
LCP49_RS02410 NONE
LCP49_RS02415  515143 ..  515159 +  -7.9  -3.14211   CAGAGCAGAACAGGT              CGGGACG GGT CGTCCCC              TTCGTCCACGGCGAT  53 119
LCP49_RS02420 NONE
LCP49_RS02425 NONE
LCP49_RS02430  519177 ..  519202 +  -2.4  -3.72576   AGGGGGTCCTGACCA         GGGC-GAGGCG ACGCC CGCCCCAGCGC         TTTCGTGGCCGAAAC  55 498
LCP49_RS02440 NONE
LCP49_RS02445 NONE
LCP49_RS02450  523452 ..  523482 + -11.1  -2.64616   GTCCTCGACGAGGTG       CACCGTGATGGTC TCGAT GACCGCCGCGGTG       TCCTCTCCGTCCCGC  56 152
LCP49_RS02460 NONE
LCP49_RS02465 NONE
LCP49_RS02525 NONE
LCP49_RS02530  542567 ..  542599 +  -3.4  -2.60723   CCTCCCGTCCTGACC     CTTCCGA-GCATCCC CTGC GGGGTGAATCCGAAG      ATTCCTTCGGAATAA  40 28
LCP49_RS02535  543110 ..  543164 +  -7.5  -3.07816   GCGGGCCGCGGCGGC GGCCACGCGGAAGGCGCTCGCGGCC GCCGA GGCCGTGGACCTCGCCCGCCTGCCC TTCGATGGGTCGCCG  50 222
LCP49_RS02550  545754 ..  545793 +  -4.4  -3.36327   GCAGGTGGCCACGTC CGT-GACCTCG-ATGC-CC TCGGC GGTGCAGGCGAGGTCGACG TTGTAGGTGCACTCG  51 71
LCP49_RS02560  547889 ..  547908 +  -3.5  -2.78384   GCGCTCCTAGCGTGA            GGCCATG AGCACC CATCGCC             TGTCCTCCACCGCCC  41 113
LCP49_RS02565  548658 ..  548679 +  -7.9  -3.53012   CGCGACGACTGAGGC           CGGCGTCGT CGGG AGGGCGCCG            TTTCCCGAACGACAG  59 29
LCP49_RS02590  556206 ..  556222 +  -3.6  -3.28712   GGCGGCCGGAGCGGG              CGGCGT CCACC ACGGCG              TTGTGCCCGGCCGAG  47 316
LCP49_RS02615 NONE
LCP49_RS02620  561120 ..  561136 +  -4.3  -2.62616   CTGGGCCGCGGCCCG              TCGGGAG GGC CGCTCGA              TCATCTGAGGCCTCC  42 1
LCP49_RS02625  561358 ..  561388 +  -5.3  -2.62184   CGCACCGGCGGCGCC       GTCATCGAGGGGG CCTGA CCCGCTCGATCCC       TGCTATACCGCGCCC  42 8
LCP49_RS02645 NONE
LCP49_RS02650 NONE
         ald NONE
LCP49_RS02685  573075 ..  573085 +  -4.6  -2.63596   TCGGGCCTGCATCGT                 CGGC CGC GTCG                 TGCTATAGGGTGCCG  42 69
LCP49_RS02690 NONE
LCP49_RS02695 NONE
LCP49_RS02700 NONE
        hpaE  578445 ..  578501 + -45.5  -3.14463   CCCCCGGCCCACCGA CGCGGGTTGAGTTGTCGCGGGTGCGGG CGC CCCGGACCCGCGACAACTCAACCCGCG TTCCTCGACGGCCTT 100 130
        hpaD  579898 ..  579912 +  -5.6  -2.70932   CCCCACGCCGTTCGA               GGCGGA AAA TCCACC               TCATTCGAGCCGGGA  45 155
LCP49_RS02715  581146 ..  581175 + -12.7  -2.52519   ACGCCCGAGGCCGTC       GCCGCCCGTGGGG GCCG CCCCGCCGCCGGC        ATGTTCCTCTCCTCC  60 214
LCP49_RS02720  582005 ..  582015 +  -3.2  -2.73124   ACGTCCGATCCTGGC                 CCAT GAC GTGG                 ATTTCCCGCCTCGAA  41 84
LCP49_RS02725  583186 ..  583204 +    -3  -3.55444   GTCATAGCACTCTGG             TCCACGCC CGT GGGGTCGA             TTTCCCGCCTCGAAA  49 105
LCP49_RS02730  584766 ..  584780 +  -4.2  -3.72576   CGTTCGTCACCTACT               GCGG CACCTGA CCGC               TTTCGTCGACGAAAC  57 15
LCP49_RS02745  588854 ..  588905 + -28.8  -3.23274   CCTGAGCACCCCGCC GGGACGACGTCGGCCCGCACCTGC GCGC GAAGGTGCGGGCCGACGTCGTCGG TTGAGTTATCACCGG 100 36
LCP49_RS02750  589986 ..  590039 + -12.4  -3.24747   AGCGAGGCGATCGCG GCCTCCTGGGCCACCGTGGACACCGC GAAC GGGGTGGCCACGGT-GCGCAGG-GCC TTCGTGATCTCCGGC  65 360
LCP49_RS02765 NONE
        paaA NONE
        paaB NONE
        paaC NONE
        paaJ NONE
        paaK NONE
LCP49_RS02805 NONE
LCP49_RS02810  602277 ..  602328 +  -3.7  -2.87132   CCCCTCCGGGAGGGC GCGCCGTCGTCGTGCGCGGC-CGG ACCGGCG CCGAGGCCCGCA-GAC-ACGCCGC TATCTCGGGGACGAA  42 94
LCP49_RS02815 NONE
LCP49_RS02820 NONE
LCP49_RS02825  605408 ..  605424 +  -3.5  -3.53091   TTCGACTACCGCTGA              GCCCCCG GGG CAGGCGC              TTTCGAACGGGAGAT  50 26
LCP49_RS11625 NONE
LCP49_RS02830  606160 ..  606191 + -12.2  -2.73364   TCCATGACGGCCCGG      CGCCCCGGCCG-GCT CAG AGCTCGGCCTGGGCC      TCGTTCCACTCGCGG  58 34
        paaZ NONE
LCP49_RS02850 NONE
LCP49_RS02855  612502 ..  612544 + -11.1  -2.62184   TCGGAGCGCACCGCC CCCGCGGCCTGGGCTGCCT CGAGC AGGTCGCCCAGACGCCGGG TGATCTCGCGCCGGC  56 208
LCP49_RS02875  619077 ..  619105 +  -3.8  -3.31144   CGGTCAGGTACCAGC       GGCCGTCCGGGGTG AAA CGCTCCG--CGGTC       TTCTCCGGCTCCCCG  47 419
LCP49_RS02885 NONE
        purB NONE
LCP49_RS02895 NONE
LCP49_RS02900  624737 ..  624755 +    -8  -3.02144   CCCTGGAAAGGAGCC             GCCGTGGC CCT GCCGCAGC             TGTTCGCCGAGCTGG  52 48
LCP49_RS02905 NONE
LCP49_RS02910  627308 ..  627323 +  -2.4  -3.29263   CGAGCCTTGCGATAT              GGCCCT TTCC GGGGCG               TTATAGGGGCCATAT  45 60
LCP49_RS02965  642543 ..  642561 +    -3  -3.06515   CGTTCCGGGAACGCC             TGCGGTCG GTA TGGGCGCA             CTTTTCAGGCTCAAA  43 153
LCP49_RS02970  643309 ..  643329 +  -7.5  -2.63257   TCCCCACGTCGGATG            CCCGGCC CCGCGCC GGCTGGG            TAGATTCTGTGCCAT  46 85
LCP49_RS02975 NONE
LCP49_RS02985  647223 ..  647257 +  -8.5  -2.72344   GGCTCTAGTCGATGC    CGCGGGCGGC--CAGGG CGT CCCCGACGTCGTCCGCG    TGCTTGAAGCTGAGC  50 134
LCP49_RS03005  650376 ..  650386 +  -2.4  -2.78384   GAGATCCGGCGCCTT                 GGCC ACC GCCC                 TGTCATCGAGCCGCG  39 113
LCP49_RS03015 NONE
LCP49_RS03020 NONE
LCP49_RS03025 NONE
LCP49_RS03030 NONE
LCP49_RS03035  655478 ..  655495 +  -5.5  -3.05384   CCGCCTCGTGCGCTC             CTGACGC CGGC GCATCAG              TTCGATCACGACCAG  48 22
LCP49_RS03040  656719 ..  656772 + -10.2  -3.78934   CCACGGCGGGGCTTC GTGC-TCTCGCTGGCAGCGACCATT CTCAT GATGGCCGCTGCCAGCGCGCCGTCC TTGTTCTACCCCCAG  71 71
LCP49_RS03045 NONE
LCP49_RS03050  658332 ..  658346 +   -10  -2.79679   ACAATCCTTGACTAG               TACCCC CTA GGGGTA               TATGGTAGGCATATT  54 77
LCP49_RS03055  658970 ..  658984 +  -2.8  -3.17075   GCGAGATCCAACCAG               CGTC CTGAGCC GACG               TTCGCTTGCCCGGCC  43 18
LCP49_RS03060 NONE
LCP49_RS03065  661656 ..  661669 +  -2.3  -2.70932   ACAAACCCTCAGGAT               GCCAG CGCG CTTGC                TCCTTGCCGACGCGC  39 80
LCP49_RS03070  662348 ..  662375 +  -4.2  -3.20382   CGATTGAATAACCCT        TGATACCCTATA GGGG TATGGGGTAGTA         TTGATGACTATGAAG  47 30
LCP49_RS03075  662755 ..  662771 +  -2.1  -4.62471   GACCGAACTGACAGA              GGAGGCA TCA TGCCCCG              TTTTTCCCGATTGAC  77 30
LCP49_RS03080  663267 ..  663295 +  -2.3  -3.16564   CCTGGTTGCTGGCCT       CACGCCGGGCGA CTGACT TCGCC-GGCGAC        TTGGTGCCCTGGCCG  43 10
LCP49_RS03085  663543 ..  663553 +  -2.4  -3.40403   GCGACTTCGAGAAGG                 GGCG ACA CGAC                 TTGTCGTAGAAGAAG  47 196
LCP49_RS03090  664587 ..  664619 +  -5.5  -2.70932   TCACACTCGACAATA      TCGCTCTAGCGCGAT ATG ATCGCCCTATGACGA      TGATTCAAGAGGAGG  45 136
LCP49_RS03095 NONE
LCP49_RS03100  666119 ..  666137 +  -4.4  -3.78775   CGAAAACCGCTGCAA             TCACCGTC GTG GTCGGTGC             TTTCCTGCTCACCGG  59 198
LCP49_RS03105 NONE
LCP49_RS03110  668186 ..  668211 +  -3.3  -3.09015   CGCCCACTCTGCGCC         GAGTTCACCGCG AGC CGTG-TGGATTC         TTCGCTACATCTCGA  44 69
LCP49_RS03115  669060 ..  669112 +  -3.1  -2.91681   TGGATCGTCACGGAC GCTTGCGCTCGGGCTTGGCGAAGC ACATGC GCGACGCCCTGCCCG-GTGCCACC TATCTCGGCTTCACC  42 287
LCP49_RS03130 NONE
LCP49_RS03135  675306 ..  675334 +  -2.9  -3.53091   TTCGCTGGAGGTGAT        CCTGGGGCGGTGG CCA CCGTCGATCTCGG        TTTGGCGGACCCAGT  51 316
LCP49_RS03170 NONE
LCP49_RS03175  682457 ..  682473 +  -2.2  -3.55801   CAGCTCCCACGCGAT              CCGC GCCAACTCA GCGG              TTTCACCCCATTCCT  50 425
LCP49_RS03185  684414 ..  684447 + -15.5  -3.12351   ATCCCGCCTGATATG     CGAAGAGTTCACCGCG CGT CGTG-TGAACTCTTCG     TTGCATCTCGACAGG  71 237
LCP49_RS03200  688783 ..  688802 +  -5.6  -2.71144   ACTTGCTCGGCTTCA            CGGTCCTGG AGA CC-GGTCCG            TGCTTCGCCCGCATC  45 468
LCP49_RS03215  690847 ..  690860 +  -3.7   -3.4072   GCACAACGGAGTAGT               GCGCC CAGC GGCCC                TTCTGCTCGCGCGTG  49 503
        arsB NONE
LCP49_RS03235 NONE
LCP49_RS03240  694132 ..  694167 +  -3.1  -3.48276   ACTGATCGAGCTCTC    CGTCG-GCCGATGAGC AAACA GCGGGACGGCACGACG    TTCTGTGCCGCCCCG  50 13
LCP49_RS03245  694586 ..  694614 +    -3  -3.02144   CCGGATGCGACGCAG       CTGGGGAGGGCGC ATGA GC-CTCACCTCGG        TCTTGCAGGCGATGG  42 9
LCP49_RS03250 NONE
LCP49_RS03265  698610 ..  698634 +  -3.3  -3.53811   AGATTCGGTCGTTTA          CGACGAGGGGC CCC GCCATGCGCCG          TTTGCGCCACCTCCG  50 43
LCP49_RS03270  700570 ..  700592 +  -8.4  -2.83894   GGCGGCCAGCACCTC          GC-CCCGGC GCAGCA GCCGGGCGC           TGTGGTCCTGGTCCT  51 517
        lysE  701725 ..  701764 +  -5.7  -3.44051   CTCACCCCGGAGGTC GGCGCGAG-CCTGACGCAA CGCC TCGCGGTAGGACTC-CGCC  TTCTGGTCGTAGAGC  53 87
LCP49_RS03315 NONE
LCP49_RS03320  709885 ..  709933 +    -2    -3.322   GGGTGGATGCGGGGC GCGACGACGTCGACTGAGGCCG AGACG CTGACGCGGACGCCGAGGTCGC TTAATGTGTGGCCAT  47 9
LCP49_RS03325  710702 ..  710732 +  -7.6  -3.17075   CCTCCGGCAGGAGGG      CCAGGGGT-GGGC GTGTCG GCCTGACCCTTGG       TTGACTTGCGACGAC  50 367
LCP49_RS03335 NONE
LCP49_RS03340 NONE
LCP49_RS03345 NONE
LCP49_RS03350  712463 ..  712519 + -10.9  -2.60257   GACGTCCGGAATCGA CTGCAGAAGTGACCCCTCTGACG CCCGCTGACAC CCCCAGAAGGGTCACTTCCGCAG TCGATTCTCAGGTGT  54 14
LCP49_RS03370 NONE
LCP49_RS03375 NONE
LCP49_RS03385 NONE
LCP49_RS03390  717608 ..  717636 +    -3  -2.78384   GGGCGGTGTGGTGGC       CCGGGCGG-CGTC CTGA GAAGACCGCTCGA        TGTGCTCAGGACCGC  39 10
LCP49_RS03400  718974 ..  718997 +  -9.5  -2.62184   CGAAGCCGGGGAACA          CGACGGCGG AGGGGG CGGCCGTCG           TCGTGTCCGCCCCGA  51 291
LCP49_RS03410  720330 ..  720359 +  -4.8  -3.14132   AGCGCCACGCAGGGT       TCGGGCGGCGGC TCCACC GCCGGTGCCGGG        TTCGTGCCCGAGGGC  46 459
LCP49_RS03415  721034 ..  721076 + -16.1  -2.78596   CACGACGCCCCCGGC CGCCGACCGGGCACCCCTC CCCAC GAAGGGCGCCCGGCCGGAG TCTCGTCACACGATC  70 208
LCP49_RS03440  730028 ..  730061 +  -6.5  -2.52543   GGCCCGGTGAGGGCG     TCGAGCCCGGGGTCG GCGT CGAACCGGGCCACGA      TCCGTTCGAGCCAGT  44 467
         idi  737976 ..  737992 +  -2.2  -3.28712   TGTCGACCTTGGCGA              ACACGA CGTCC TCGTGC              TTCTCCGAGGCGGCC  46 343
        aroQ NONE
LCP49_RS03505  739676 ..  739695 +  -6.4  -3.33361   TCTTGGCCAGCAGGT            CGG-CACGC CAC GCGTGGTCG            TTCATGTCCTTGATG  52 328
LCP49_RS03520  742349 ..  742390 + -22.4  -3.32844   CCACACCGACGCGAA GACCCGTCGGCC-CG-CCCC GCGA GGGGACGTGGCCGGCGGGTC TTCTCGCCTCCCAGG 100 45
LCP49_RS03530 NONE
LCP49_RS03535 NONE
LCP49_RS03540 NONE
LCP49_RS03545  748247 ..  748269 +  -6.8  -2.71144   CCGCGTGCTCGAGCA           GGGCCTCGAG GTC CGCGTGGTCC           TCGTTCCGAGCGATC  47 271
LCP49_RS03555  749169 ..  749179 +  -3.2  -3.90112   TCGGGAAACGGCGGC                 GTGT CGG GCAC                 TTTCGTTCGGGAAAC  59 66
LCP49_RS03570  751500 ..  751554 +  -5.5  -3.28714   GTCATCGCGATGGCC TGGCCGAACGCCTGCGG-GTGCACGGC CGT GACGAGCACGCCGTGGGCGC-CGCCGA TCTTCTCCTGGATCT  50 466
LCP49_RS03595  756949 ..  756968 +  -2.8  -3.14564   CGCCGTACTGCGCGG            CGGTCG CCAGCTCC TGACCG             TTCATGAGGAACTCG  44 347
LCP49_RS03605  759262 ..  759306 +    -9  -2.92192   GACTGACCCGGCCCG GCCCGCCAGGTGACCCGGCG CTGAA CGTCGGGGGACGGGGCGGCC TCTGGTTCCGTCGGC  55 35
LCP49_RS03610  760582 ..  760592 +  -2.4  -3.35679   TCAGCGCGATGTCGA                 CGCG CAG CGGG                 TTCTGCGTGCCGCCG  48 263
LCP49_RS03635  764868 ..  764884 +    -5  -3.35679   TGAGCACTCCCACGC              CCACGC CGACC GCGAGG              TTGTGGGTGGCCACG  52 380
LCP49_RS03715 NONE
        rlmC  782307 ..  782340 + -10.2  -3.65046   GACGGAAGCCGGGGC     GCGTCACCG-CGGGC TCCCC GCCCGACGGTTCCGC     TTCTTCAACTCGACG  69 39
LCP49_RS03730  786611 ..  786641 + -21.3  -3.53012   CCTTTGGGGGCGAAA       GTGGGCGGTATCC CGCGC GGATACCGCCCAC       TTTCGCCCCCGGACG  91 72
LCP49_RS03750 NONE
LCP49_RS03755 NONE
LCP49_RS03760  793997 ..  794023 +   -18  -2.87564   CGAGGCCCGCAGACA         CGCCGCTACGCC GTC GTCGTAGCGGCG         TGTCTGCGGGCCTCG  76 104
LCP49_RS03765 NONE
LCP49_RS03780 NONE
LCP49_RS03785 NONE
LCP49_RS11635  798535 ..  798570 +  -8.8  -2.62396   CCCTCACTCGCGCGC    TGCCCGGCGGCCGGCG TCGT CGTCGACCGTCCGGAA     TCGTCTGCAGAACTG  49 98
LCP49_RS03815  805548 ..  805568 + -12.5  -2.62184   CCGGTGCCGTGGTGG            CGGTCTCGG TGG CCGGGGCCG            TGGTCTGCGCGACGG  58 434
LCP49_RS03840 NONE
LCP49_RS03845 NONE
LCP49_RS03850 NONE
LCP49_RS03855  813547 ..  813588 +  -5.9  -2.64616   CGCGGGGACGGGGAC CGC-CGATGAGCGCCGACGG CATGA TCGT-GGCGCACA-CGCGCG TGGTGTCCGTGGAGC  44 17
LCP49_RS03860 NONE
LCP49_RS03865  815722 ..  815741 +  -5.6  -3.30124   GGAAGGTGTCCTGTT            CGCGGCCGC GCA GCA-CCGCG            TTGTAGACGATCCCC  50 376
LCP49_RS03885 NONE
LCP49_RS03890 NONE
LCP49_RS03895 NONE
LCP49_RS03900  822426 ..  822436 +  -2.4  -3.71848   CCAGCAGGTCCTGCA                 GGGC GTC GGCC                 TTCTTCCTGCCGCCG  54 249
LCP49_RS03920 NONE
LCP49_RS03925  825662 ..  825712 +  -8.1  -2.80935   TCGAGAGGTGGCCGG CCGGCAC-GTCGCCGAGCCGCTCCG TGA CGG-GTGCCTCGGGGGCCGCGGCGG TCTCGTACATGGCGT  51 292
LCP49_RS03950  830207 ..  830255 +  -7.2  -3.14132   CTGGTCCCACCGGCT CGCCACCGCGTAGACCG-CGAGC GCCG GCCCGGCGATGCCCGCGGTGGTG TTCATGAACCCGGCC  51 338
LCP49_RS03960 NONE
LCP49_RS03965  832888 ..  832898 +  -8.2  -2.70932   GCTCGCCCTTGAGGA                 GGCC GGC GGCC                 TCCTTCGCCAGCCCG  49 197
LCP49_RS03975  834200 ..  834247 +  -7.6  -2.62616   GGTTGCCGGGGTGCT GCGGGTCGGCCG-GGATGCCGC GGCTCA GGGGC-TCCACGGGCGGGCCGC TCGTCTCCGGGGTCA  46 390
LCP49_RS04000 NONE
LCP49_RS04005  838835 ..  838849 +  -5.7  -3.01712   TGGTGTTGAAGAACC               CGTAC ATCAG GTACG               TGTTCACCCCGAGCG  46 425
LCP49_RS04025 NONE
        ugpC  845127 ..  845168 + -14.3  -3.32844   TCAGCCCTGGCGCTC GGCCAGCTCCGCGAGCCGG TCGA TCGACGCGCGGAGCTGCTC  TTCTCCGGTCCGCAG  72 74
LCP49_RS04045  846809 ..  846859 + -10.9  -2.70932   GGGTCCTCCGCACCG GGGCCCGTCTGCG-GTCGGGGCCA CGGG TGGCCCCGGCGCGCCTCCGCCCCC TCGTTGAAACGACGC  55 66
LCP49_RS04055  848971 ..  848983 +  -3.3  -2.62396   GGCCGTGGCCTGACG                GGCGT TGA ACACC                TGCTGTCCGGCGGTG  40 443
        trpB  852829 ..  852849 + -10.4  -3.01791   TGGCCGGCCAGGCCT            CGTCCGGG CACCC CCCGGATG            TCTTGGCCGAGACAT  58 431
LCP49_RS04085  853986 ..  854001 +    -9  -3.23216   CGGGGCCATGTAGGT              CACCAC GGAC GTGGTG               TTGATGATCGTGGAA  58 377
LCP49_RS04105 NONE
LCP49_RS04110 NONE
LCP49_RS04120  862007 ..  862044 +  -4.7  -3.28712   CCGCCCACGCGCGGA   CGAGCGCCTCGGCGA-CC TCC GGCTGGTCCAGGTGCACG   TTGTGGCCGGCGGCG  48 77
LCP49_RS04155  869710 ..  869747 +  -3.2  -2.70932   ACGCCGGCGGAGTGA   TCTCGGGATGACCGCC CGGGCC GGCGGGTGGGCCGAGG    TGCTTGCGGAGGCGG  41 26
LCP49_RS04160  870513 ..  870525 +  -4.7  -3.71848   GCTGAGCGGCCAGAG                CAGGG CCA CCCCG                TTGTTGGTGAGGGCG  57 246
LCP49_RS04225  879736 ..  879746 +  -8.2  -2.64616   CCTCCCCCAAGCCGA                 GGCC GGT GGCC                 TCCTCTGGCTCAAGG  48 213
LCP49_RS04235 NONE
LCP49_RS04240 NONE
        glpK  884770 ..  884780 +  -6.8  -3.28712   TCCGCTGTGGAACCT                 CCTC GGA GAGG                 TTCTCCACGGCCACG  53 338
LCP49_RS04255  886908 ..  886926 +  -8.8  -3.14344   CCGGTTCCAGCTGCT             CTCCGACG CCC CGTGGGAG             TTGATCGCCCCGATA  53 100
LCP49_RS04270 NONE
LCP49_RS04275  890804 ..  890815 +  -2.2  -3.36749   CTCCGGACGTCGACG                CC-GC GCT GCAGG                TTGATCTTGACCATG  48 98
LCP49_RS04295  895316 ..  895326 +  -8.2  -2.88663   GCGGCGGGGACGGTG                 CGCC TAG GGCG                 TGTCTGAGAATAGAT  51 8
LCP49_RS04300 NONE
LCP49_RS04305 NONE
LCP49_RS04310 NONE
LCP49_RS04315 NONE
LCP49_RS04320  903499 ..  903513 +  -4.2  -3.40403   AATGAGCTGGGGCCG               TGGCAG GCC CTGTCG               TTCTGCTGCACGGAA  51 387
LCP49_RS04340 NONE
LCP49_RS04345  910383 ..  910399 +  -2.1  -3.25823   AGCAGAGCAGCCGGT              CGCCCTC CTC GAGGACC              TTGGTGTCCGCGGGG  46 199
LCP49_RS04355 NONE
LCP49_RS04360  913375 ..  913390 +  -6.1  -3.15861   GGCGACGCCGATCTC              GGTGG GCCGGA CCACC               TTGATCGCGATGGTC  50 270
LCP49_RS04370  915533 ..  915571 + -25.5  -2.65815   CGCGCCCACACACGA   TGATGCCCCGCCCGTTT GAGTG GAACGGGCGGGGCATCA   TCGTGTGGATGTCGC 100 153
LCP49_RS04400  920207 ..  920218 +  -5.8  -3.71848   CAGACCACGAACTGC                GGTG AGTA CACC                 TTGTTGGTGAGCACG  58 377
LCP49_RS04410  922971 ..  922996 +  -5.3  -3.31144   CGAGCACGAGCAGCC         GGTCCTCGCCG ACGG CCGCCAGGATC          TTCTCCCAGTCGCCC  50 372
LCP49_RS04430 NONE
LCP49_RS04435  929365 ..  929383 +  -2.3  -2.87132   GCCGGCGCTGGGTCG             TCTGCTG CGCGT CGGCTGA             TCTCTGGCCGCGACG  40 7
LCP49_RS04440  931673 ..  931683 +  -4.6  -3.40403   CGGAATACCCGCCCG                 TGGC TCC GCCG                 TTGTCCTGGAGGAGC  51 117
        trxB NONE
        trxA  933168 ..  933212 + -32.4  -3.36273   CCCCTCCCCCACTCA C-CACGACGGCCCCGTCACCC CAGA GGGTGACGGGGCCGTCGTGCG TTGATCTTCAGGACC 100 42
        dnaA  943306 ..  943342 + -21.8  -3.40498   GCCACCCACTGCCCC   CTCGAGTCCCGGTTCGA ACCT TCGA-CCGGGACTCGAG    TCTTCTTCCACATTG 100 41
        dnaN NONE
        recF NONE
LCP49_RS04510  947084 ..  947096 +  -4.7  -3.21276   TGAGCCGTGTCCCTG                GCCGC TGA GCGGG                TGTTCTCCCGCGGCG  49 165
        gyrB NONE
        gyrA NONE
LCP49_RS04525  952753 ..  952790 + -26.3    -3.272   GACTGAGCAGACCCT   CGACGACGCCCCGCGCG GATT TGCGCGGGGCGTCGGCG    TTCCTGTACAGTCAT 100 35
LCP49_RS04530  952929 ..  952954 + -12.5  -3.25942   CCCACTCCCACCACA         CAGAGCCCCGG TCCG CTGGGGCTCCG          TTCGTCTCCGGAGGT  68 36
LCP49_RS04535 NONE
LCP49_RS04540  953230 ..  953259 + -21.5  -3.83026   GCCTCCACCGAAGAA       GGGCCCGGGAGTC GTGA GATTCCCGGGCCC        TTTCGTATGCCCAGG  95 32
LCP49_RS04545 NONE
LCP49_RS04550  954734 ..  954755 +  -2.9  -2.78463   TGGATGGGGCGGGTG           TGCGTCGCCG CGA TGGCC-CGCA           TCTGGTCCACCACGT  41 192
LCP49_RS04565 NONE
LCP49_RS04570  958686 ..  958702 +  -6.5  -3.28712   GGCCGAGGATCAGCA              GGCCG AACATCA CGGCC              TTGTACACGGGGGAG  52 339
LCP49_RS04580  959863 ..  959889 +  -4.2  -3.01712   TCGGCGACGGCGTCG         CGGTCGCCGTCG GCT CGGGGGTGGGCG         TGTTCGAGGCGGACG  45 233
LCP49_RS04620  970536 ..  970548 +  -3.3  -3.55071   GCTGGTCCCACTCAC                CCGTT GGG GGCGG                TTTCGGGCGGTATCC  50 94
LCP49_RS04630 NONE
LCP49_RS04635  972711 ..  972727 +  -2.1  -3.32844   TGACCCTGCCCTCGG              GCATCCT GGG AGGTGGC              TTCTGACATGGAGAC  47 3
        tctA  974272 ..  974328 + -29.8  -3.96148   CACCCCCGAAGGCAA CGCGGGTTGAGTTGTCACCGGTGTGCGG CCT CCGCAC-CCA-TGACAACTCAACCCGCG TTTCTGGTGGGCGGC 100 57
LCP49_RS04650  977083 ..  977096 +  -2.3  -3.46106   ATGTGCCCCCGGCCC               GTGAC GTCC GTCTC                TATTTCGAATTTTGA  49 166
LCP49_RS04655  977819 ..  977843 + -19.3  -2.82834   CCTCGCGCGGCGAGA          CCGGGTCCCTC GAT GAGGGGCCCGG          TCTCCTCGTAGGGTG  79 52
LCP49_RS04660 NONE
LCP49_RS04665  979565 ..  979592 +    -4  -2.79183   CGCGGGCGAAGGGGC        GCCA-GCTCGCGC TGA GGGCGGGCCTGCC        TATGCTCGGAATGAC  42 11
LCP49_RS04670  981059 ..  981091 +  -2.6  -2.59055   GCCTCGCCCTGCCCG     CCCCCGCCCAGCGTT TTCG AACG-TGAAAGGGGG      GTTCTCAGCGCTTTC  38 61
LCP49_RS04680  983869 ..  983919 +  -3.8  -2.80816   CCGCGGCCGACGTCC GGCGCGGC-GCACCGTCCGCGTC CACACC GGTGCCGAGGGTCCAGTCGCGCA TGTGATCGATCGCCG  42 347
LCP49_RS04690 NONE
LCP49_RS04725 NONE
LCP49_RS04730  993745 ..  993776 +  -8.7  -3.05343   CTTCGGCAGCAGCGC      CCGCTTCATCCGCC CGTAC GGCGGGT-ACGCGG      TCTTGAGCGTGTCCA  53 60
LCP49_RS04750 NONE
LCP49_RS04755 NONE
LCP49_RS04760 1001869 .. 1001902 + -13.1  -2.73364   GAGCACGTTGACCAT     CGAGGTGTAGGGCGT GAAC GCGCACTGCGCCTCG      TAGTTGGCCTCGGGC  61 188
LCP49_RS04770 NONE
        pheA 1004684 .. 1004736 + -10.5  -3.53012   AAACGGGACGATCAC CGCGACGACGGGCCGTCGTCGCG CTTCCCGTC CGCG-CGTCGCCCCGGCGTC-CG TTTCCCGAACGAAAG  65 128
        serS 1007384 .. 1007415 +  -3.6  -3.06302   GCCCCCGCCGTTCAC      CCGCGCGTCGCCG TCGTGTC CGG-GCCGTGTGG      TTGGGTGGAGGTCAT  44 107
LCP49_RS04790 1008376 .. 1008392 +  -5.8  -3.40403   GCGCCGTGATCCCGA             GCGCGGC GGCC GCCG-GC              TTCTGCTGGCCGCGC  52 163
LCP49_RS04805 1011109 .. 1011119 +  -4.6  -2.87468   CGGGCTCTGATCCGA                 GGTC CGG GGCC                 TGTGATCTGATGGAG  44 31
LCP49_RS04810 NONE
        tilS NONE
         hpt 1014591 .. 1014625 +  -4.9  -3.28712   GCGCCCCCACCCGGA    CCAGCG-TGGCGGC GGTGCGGA GCCGTCGTCGCCGG     TTGTGCGCGGACGGG  50 459
        ftsH NONE
        folE NONE
        folP NONE
        folB NONE
        folK NONE
LCP49_RS04855 NONE
LCP49_RS04860 NONE
LCP49_RS04865 NONE
LCP49_RS04870 1024014 .. 1024062 +  -5.4   -4.4078   CTTTCGTTCGGGAAA CGG--CGGGTCCCGGGCCGTTTTC GTTCG GGAAACGGC--GGGCCCCGAGCCG TTTTCGTTCGGGAAA  73 60
LCP49_RS04880 1025329 .. 1025380 + -11.3  -3.02511   CCGGCGCCTGAGGCG CGGCGGGCACCGGGGCGGCCCGCC GTCAA GGCCG-CCACCCCGCCGTCCTCCG TGTTGCCCGGATCAC  61 30
LCP49_RS04885 1027597 .. 1027645 + -17.5  -3.01712   CGGGCCCGGCGCCGC GCATCGTGACGGGCGGCTGAAC CTCTCC GATCAGCCGCCCGTCACCG-GC TGTTCACCGGACGGG  77 58
LCP49_RS04890 1028999 .. 1029014 +  -2.5  -3.02144   CCGACCGGAGACGAT              CC-CGG CGGAC CCGAGG              TCTTCCGGCACGTCC  42 48
LCP49_RS04895 NONE
LCP49_RS04900 NONE
LCP49_RS04905 NONE
        panC NONE
LCP49_RS04915 1032984 .. 1033000 +  -3.6  -3.28712   TGGCCGCAACGTGCC              GGACTG ACCCC CAGACC              TTGTCGACCGCCCCG  47 19
LCP49_RS04920 1033565 .. 1033602 + -23.6  -2.64243   TGGCCGTCCCCTCGA   CGACGGGCA-CGCACCC GGCCA GGGTGCGGTGCCCGTCG   TCGTGTCCGGTGTCA  89 70
LCP49_RS04925 1035806 .. 1035853 +  -6.3  -2.79183   GGTCCTGCATCCGGG TCT-GACGCTCGGCG-GCCAGCCG GTC CAGCAGGCGCGTC-AGCGTCCGGA TGTCCTCGCGGTCCC  46 98
LCP49_RS04940 NONE
        lysS NONE
LCP49_RS04950 1041091 .. 1041117 +  -5.1  -2.62018   GGTGAGATTCCTTCC        CCGGCGTTGAAG AATC CTTCTGC-CCGG         CTTCGTTGCGGTATT  42 36
LCP49_RS04955 1041554 .. 1041589 + -14.6  -2.71144   CGCAAGTGAGCGCCC    CGCCCGGGTGCGTCGA GGAA TCGGCGTCCCCGGGCC     TCGTTCCGGCACCTC  64 32
LCP49_RS04960 1044440 .. 1044462 +  -3.3  -3.05384   CGCTGAACCGGCCCG          CCTC-CCCGC AGAC GCGAGAGGGG           TTCCCTCGCGGCGGG  44 206
LCP49_RS04965 1044786 .. 1044824 + -29.7  -2.87931   CTGCCGTCGACGCCG  CGGGAGCCCCCG-CCCGG TCCG CCGGGACGGGGGCTCCCG   TCTGTCCGGGGTCGG 100 43
        istA NONE
        istB 1047653 .. 1047670 +  -5.5  -3.40403   AAACGGGCAAACCAG             CTGGCCA CCAG TGGGCAG              TTCTGATGGCCACCA  53 70
LCP49_RS04990 1049647 .. 1049671 +  -4.9  -3.25823   GGCCTCACCCGCGAC         CGCGCGCGCG ATCACC CG-GCGCACG          TTGGTGTCCACGACG  50 519
LCP49_RS05000 NONE
        pstS 1055096 .. 1055154 + -25.3  -2.93723   CTTCTTGTCGGCTGA -CCC-ACCGCCGCTTCGGCCGCCGGGCCC CAC GGGCCCGGCGGCTGAAGCCGCGTCAGGGC TCTCGTTCGTCGCGG  95 46
        pstC NONE
        pstA NONE
        pstB NONE
LCP49_RS05050 NONE
LCP49_RS05055 NONE
LCP49_RS05060 1062975 .. 1063004 + -12.1  -2.80816   GCTCGAGGGTGCGCG       CGGTCTGCTCGCCG TCC CAGCGGGC-GACCG       TCTCCTCGATCACCC  60 270
LCP49_RS05070 1065170 .. 1065219 + -12.6  -2.79796   GCCTGAGGGCGCCGC GCCGCACGCGCAGACGTGGCCG GCGTTG CGTCCCCGCCCGCGCTTGTGGC TATAGTCACGTCCAG  62 35
LCP49_RS05075 NONE
LCP49_RS05080 1068114 .. 1068128 +  -2.1  -2.94416   CTCCTACGGCCTCAT              CG-ACC CGAG GGTGCG               TGTCTCATGAGCGTG  42 1
LCP49_RS05085 NONE
LCP49_RS05090 1071318 .. 1071340 +  -6.8  -3.29144   CCAGGGCGTTGCGGG           CGCGGCCGTC CCC GGAGGCGGCG           TTCTCCAGCACCTGG  53 459
LCP49_RS05105 1075766 .. 1075802 +    -5  -3.35679   GGGGGGTGAGCCGGC   GGCGG-GGGCGAGGCAC ACTG GTGCCATGATCGTCGCC    TTCTCCGTCGCCCCC  51 32
LCP49_RS05110 1076185 .. 1076228 +  -2.3  -2.93853   CCCCCTCCCCGCTGC CCCCCCGG-ACGCTTTCGTT CGAGA AACGGCGGCGTGTCGAGGCG CTTTCGTTCGAGAAA  42 42
LCP49_RS05115 NONE
LCP49_RS05120 NONE
LCP49_RS05125 NONE
LCP49_RS05135 1079470 .. 1079480 +  -5.4  -3.63895   CACGACGCTCGGAGG                 CTCT GCT AGAG                 TTTCCACTCGTTGCG  56 90
LCP49_RS05140 1079629 .. 1079668 +  -7.1  -2.92389   GCATTCGGAAACGGA  GTCCGGTGACGCATGGTC CTGGT GACGAAG-GTCGCCGGGC  TCTGTAGCTCAGTTG  49 60
LCP49_RS05145 1079751 .. 1079774 +   -21  -3.21099   CCACCACTTCGAGAA          GGCCCCCCGC AGAC GCGGGGGGCC           TTCGTCGTCCGGGGC  90 35
LCP49_RS05150 1080756 .. 1080772 +  -5.7  -2.62184   GCGGGCGGGCCCGTC              CGGCGCC GCC GTCGTCG              TGGTGTCCCACACCC  44 333
LCP49_RS05160 NONE
        pyrE 1091649 .. 1091671 +  -5.5  -3.44325   AAGATGATCGCCGCC           CAGGACGAG ATCTG CTTGACCTG           TTCGTTCTGGGCGAT  52 218
LCP49_RS05210 NONE
LCP49_RS05215 1094098 .. 1094142 +    -7  -2.98072   GGCGGTTCGTCAGGC CCTCCTCGCGGGA-GTAGTCG AACA CGGCCACCTGCCGTGTGGGGG TGTCGTTGTAGTAGG  50 479
        fbaA 1097618 .. 1097633 +  -2.4  -3.37796   CACGGAGAGGGCGAA              CAGTCC GTCG GGGCCG               TTCTCGATCATCGAG  48 352
        aceA NONE
        aceB 1102492 .. 1102509 +  -8.3  -2.83343   GGCCGGTGGGGATCT             CCCGGGC CTGG GCCAGGG              TCTCCTCGTCCATCT  51 327
LCP49_RS05255 NONE
LCP49_RS05260 1104850 .. 1104884 + -25.1  -2.78816   GTGCGAGTGATGACA     GGCGAAGGGCCCCGG TGATC CCGGGGCCCTTCGTC     TGTCCTGCCACGTCC  93 137
LCP49_RS05275 1107195 .. 1107232 +  -2.5  -2.54193   GGTGGGGAATGAGCG   TGAGTGGCGGTGGCGCA TCGG TGTGGCACCTCCCCTGG    TGGGTTCGGCTGGTG  38 114
LCP49_RS05280 1107641 .. 1107655 +  -2.8  -3.06492   CCCCGCTCCTGAACA               CTGTTC AAT GAACAC               TGTTAGAGTCCCTCG  43 57
        bioB NONE
LCP49_RS05295 1111308 .. 1111324 +  -5.7   -3.4072   GGTCCACCGCCTCGG              AGTCGGC GGC GCCGGCC              TTCTGGTCCAGGCTG  52 383
LCP49_RS05305 1114233 .. 1114245 +  -4.7  -2.62184   CCCTCGCTCGCCAAC                CGCCG CAC CGACG                TCCTCTGAGCCGCCC  42 5
LCP49_RS05310 1114968 .. 1115001 + -26.7  -3.37975   CCGGTCACAGAGAAA     GGCCCCGGTCCCGGC TCTC GCCGGGCCCGGGGCC      TTCTCCGTCATCACT 100 65
LCP49_RS05320 NONE
LCP49_RS05325 NONE
        hutI NONE
        hutH 1122272 .. 1122306 +    -4   -3.4252   GGGTGCCGGTGCACT     CGAGCTTCTCGCGCTG GGC CAGGACGCGGGGCACG     TTGTCGTCGATCACG  51 303
LCP49_RS05350 NONE
LCP49_RS05355 NONE
LCP49_RS05360 1129948 .. 1129959 +  -2.2  -3.03243   CTCCAGTTTCTATGA                CTGC TCAC GTAG                 TGTTCAGACATGACT  42 88
LCP49_RS05365 1130587 .. 1130597 +  -6.8  -2.98015   AAAGCTCTGGAAGAT                 GCAG AAT CTGC                 TATCTGATCATTGCA  49 8
LCP49_RS05405 NONE
LCP49_RS05410 NONE
LCP49_RS05415 NONE
LCP49_RS05420 1142841 .. 1142853 +  -4.7  -2.67515   CCGGGTGGGCCGGCG                GGCCG CCA CGGCA                TGATGTCCTGATGGA  42 200
LCP49_RS05425 1144191 .. 1144204 +  -3.1  -3.30441   CCTCGGCGATCTGCC               CGACGC ACG GC-TCG               TTCTGCAGGCTCGTG  47 63
LCP49_RS05435 1147903 .. 1147917 +  -2.7  -3.79906   ATCGCCAGGATCAGG               CGGTC CGTGC GTCCG               TTGTTCTGCGAGTCG  57 154
LCP49_RS05455 NONE
LCP49_RS05460 NONE
LCP49_RS05465 1153951 .. 1153986 + -33.4  -2.87564   CCCGGCCCACGGCGG    CGGCGGCCCGCCTCCC CTCG GGGAGGCGGGCCGCCG     TGTCTGCGCGGGTCA 100 41
LCP49_RS05480 1155768 .. 1155809 +   -10  -2.80935   CGGTGGTCCTCGCCC TCGCCGCCGTCGTC-CTCA CCGGC TGCGCGCCGTCGGCGGCGG TCTCCTCCCTCCCGT  54 97
LCP49_RS05485 1156501 .. 1156514 +  -3.8  -2.60496   GACGCAGCACACCGC               GGGA GAGGAG TCCC                ATGTTTGAGGACGAC  40 88
LCP49_RS11640 1156911 .. 1156931 +  -8.9  -3.14344   TTGGGTCCGCCCCAG            GACGAGGTG CTG CGCCTCGCC            TTCCTGGAGGACCTG  53 296
LCP49_RS05495 1157871 .. 1157927 + -36.9  -2.63079   AGCCCTGAGATACGA CGAGCCCTGCGCAGTGGGGCCTATC GGTACTG GATAGGCACCACTGCGCAGGGCTCG TCGCTTCTGTCCCAG 100 43
LCP49_RS05515 NONE
LCP49_RS05520 1162457 .. 1162471 +  -9.2  -3.28924   GCGAGCGGGAGCGAG               GGGTCG TAG CGGCCC               TTCTCGAGGGAGATG  58 393
LCP49_RS05540 1164146 .. 1164160 + -11.4  -2.79302   GGGTGCCCTGGCTGT               CCGCTG CGG CAGCGG               TGTGGTGGGAGTGGT  60 108
LCP49_RS05560 1171942 .. 1171981 +  -4.8   -3.2614   CTCCTCGGCGTCGAG  GC-CGAAGGCGGCGTGCAC GGC GCGGACGGCGTCGTCGAGC  TTGCTCTCGGCGGTG  48 199
LCP49_RS05570 NONE
LCP49_RS05575 1175962 .. 1175986 +    -2  -3.14132   GCGGACGTGCAGCTG         CTCGG-GGCCG ATGC CGGCGATCGGG          TTGATGGCCCCGCCG  44 312
LCP49_RS05590 1181050 .. 1181075 +  -8.2  -3.31144   GGTCCACGCCCTGCG         CCAGGTCGTC CACGAC GACGGCCAGG          TTGTACGCGTACGCC  55 412
LCP49_RS05605 1182051 .. 1182077 + -17.3  -4.16943   ATCCTCCGCGGGCAA         GCCCCGGGACC CCAGT GGTTCCGGGGC         TTTTCGCATGTCGGG 100 33
LCP49_RS05610 1183994 .. 1184004 +  -2.4  -3.20723   TGCGCATGGCGTAGA                 GCGC GAA GCCC                 TTGGCTTGCTCGAAC  46 196
LCP49_RS05625 1187788 .. 1187817 + -25.1  -2.62983   GATGATGTGGTGATC       CGAAGGCCCCGCC TCAC GGCGGGGCCTTCG        TCATGTCCCCGTCCC  93 113
LCP49_RS05630 1188886 .. 1188934 +  -2.2  -2.96274   ATCGGGTGCGGTCAG CGGCCCTCGTGGACCGCCCGC AGCTCGTA GCC-GCGCTCCTCCACGGCCG TCTGCTTCTCGGCGC  42 50
LCP49_RS05650 NONE
LCP49_RS05655 NONE
LCP49_RS05660 1196416 .. 1196428 +  -3.3   -3.5627   CGACGGCCCCTCCTC                CTCCC ACC GGGAC                TTTCGAACGTGATCT  50 54
LCP49_RS05670 1199078 .. 1199132 + -10.5  -3.15544   GGTCAGGTCCGCTCC GCGCGCGGCCAGCCGGCGCTG-GGCCT CGT GGGCCACGGCGACGGC-GGTCGGGGAC TTGGTGCGGATGGCC  58 333
LCP49_RS05695 1204614 .. 1204640 +  -2.2  -3.28712   TGGACCTGCAGGAGC         GCGGACGC CTTGGACATCC GCATCCGC         TTCTCGCGCGAGAAG  46 368
LCP49_RS05710 1208057 .. 1208067 +  -2.4  -2.55351   GGGCGGGCCCTCACC                 GGCG TCT CGGC                 CTTCGTGTGAGCCAC  38 5
        gcvP NONE
        gcvT 1215962 .. 1215974 +  -4.7  -3.06796   GGCCCACCGCTCGGC                GGTCC CGG GGCCC                TTCGCTAGACTCGGG  46 61
LCP49_RS05740 1217149 .. 1217168 +  -2.8  -3.14132   CCGTCGGCCGGTCCC            GCTCGATCG AGG CGAGC-AGC            TTGGTCGCCACGGCG  44 297
LCP49_RS05750 1217880 .. 1217923 + -18.2  -2.71144   ACCTGTCGCCACTTC GGCATCTGGTGC-GACTGACC CCG GGTCGGTCCGCCCCTGATGCC TGATTCGAGCCCATC  74 8
LCP49_RS05755 1219384 .. 1219409 + -19.1  -4.05446   ACGCGGTTCCGAGAA         GGACGATGGCC ATCC GGCCATCGTCC          TTTCTCGTTGCGGGC 100 231
LCP49_RS05775 NONE
LCP49_RS05780 1222900 .. 1222942 + -25.7  -2.87931   CCCCGGCCGGAGGAG GCGACGGCGCCC-GCGTCAC GAGC GTGACGCAGGGCGCCGTCCC TGTATCCGGGGTCAC 100 47
LCP49_RS05785 1223753 .. 1223771 + -11.6  -3.28712   GGCCGGGGCGTGGAG             CCACGCCC GCA GGGCGCGG             TTGTGGACGGCCACC  63 165
LCP49_RS05795 1225630 .. 1225659 + -11.3   -2.5655   GGTGCGCACGCCCCC       CTGCCGCCGATTC GTCT GGCTCGGCGGCCG        ATTCATCTGGCTCAC  57 85
LCP49_RS05850 NONE
LCP49_RS11645 1251965 .. 1251978 +  -3.7  -3.06183   GCCGCCCGCCGTCGT               CGGGC GCGA GCGCG                TTCAGTCGCGCTGGG  44 242
         upp 1254360 .. 1254394 +   -20  -2.62184   TCCGCCACGAGACGA     CCACGGCCCCCGCC CCCACCC GGCGGGGACCGTGG     TCGTCTCACGGGAGC  81 59
LCP49_RS05920 NONE
LCP49_RS05925 1256408 .. 1256424 +  -4.3  -2.88249   GGCGAAGTGCAAATC              GACGGTC TGC GGCGGTC              TGTGTCGGGGGTGTG  44 248
LCP49_RS05935 1258662 .. 1258687 +  -7.5  -2.75074   CGAAGTGCATCACAC         CCTCGACGGTCG TGA CGCCC-TCGGGG         TCCTGTTCGGGTCGC  47 260
LCP49_RS05950 1262978 .. 1263002 + -11.3  -3.14564   CTCGCCCCCGAACAC          GGCGGACTTGG CGG CCATGACCGCC          TTGATGAAGGAGTGG  61 498
LCP49_RS05960 1265441 .. 1265486 +  -3.9  -3.28712   GATCATCTGCTGGTA GGTCACGCAGTAGGTGT-CCTC CTC GACGCAGACCTCCCGCATGACC TTCTCCACAGCCGGG  48 182
LCP49_RS05970 1267789 .. 1267815 + -18.1  -2.87132   GCGCAGACGCGAAGA         GGGCCGGAATC GCGTG GATTCCGGCCC         TCTCTGGCGGAGACG  76 72
        istA NONE
        istB 1275394 .. 1275404 +  -2.4  -3.89354   ATGGCCCTTGACACG                 GGTG GGG CTCC                 TTCTTCATTTCGGCC  60 155
LCP49_RS06060 1283751 .. 1283761 +  -2.4  -3.40403   CGAGCTGGAGGCCCA                 CCAG GAT CGGG                 TTGTGGTCCGAGGAC  48 316
LCP49_RS06080 1289975 .. 1289999 +  -4.1  -3.05463   GGCCGTCCGGCGACC          GCGCATGAGGG GGC CCTTCGCACGC          TTCCGTCAGGAGCGT  44 18
LCP49_RS06085 1290520 .. 1290536 +  -2.1  -3.53224   CCCCCTGCCGGATTC              GAACCGG CGA CCTGCTC              TTTACGAGGGAGCTG  49 117
LCP49_RS06095 1291791 .. 1291849 +  -2.4  -3.62096   ACGTCGATCATGGCC CGG-TCCAGCGAGTCCCGGA-CGGCGCGGC GCC GCCG-GCGGGTCTGGTCCTC-CTCGAGCCG TTTGACGTGGTGGCG  54 323
LCP49_RS06110 NONE
LCP49_RS06120 NONE
LCP49_RS06130 NONE
LCP49_RS06135 1298458 .. 1298487 +  -2.8  -3.28712   GCCAGGTCGGCGGTG      CC-G-CCGTTGCCG GAGA CGGTCACGGGCAGG       TTCTCGCCGACCCAC  46 259
LCP49_RS06145 1299566 .. 1299606 + -38.5  -3.72576   ACGAGCAGCACACGA  CAGGGGAGGGGCCCGCGTC CAC GACGCGGGCCCCTCCCCTG  TTTCGTCCCCGGCCG 100 40
        ispF NONE
        cysS NONE
        rlmB 1303670 .. 1303704 + -11.5  -2.82015   TGACGCCGATCACAT    GGCAGGATGTCGCGTG GATG CGCGC-ACGTCTTGCC     TGTGATGCGTGTCAC  60 126
LCP49_RS06165 NONE
LCP49_RS06170 1305912 .. 1305926 +  -2.7  -2.74563   CGCCGCATCCGTCTC               CGAGG AGGCC CCCCG               TGCTTGAGATCTCAC  39 4
LCP49_RS06175 1306739 .. 1306783 +   -17  -3.28712   CGTCCGGCGCCCCGT C-CCCGGCCCGCCCCTCCGCC CCAC GGCGGGCGGGCAGGCCGGCCG TTCTCACCGGCGCGG  77 47
LCP49_RS06180 NONE
        glgB 1311406 .. 1311420 +  -3.4  -3.40511   CCCTTGACCGCACGC               CGGGTG CCG CCCCTG               ATTTTGTGTTCGGTG  49 142
LCP49_RS06190 1313752 .. 1313773 +  -6.5  -4.17309   CTGGAACAGCAGGTG           CCCTGACCT GTGA GGGTTGGGG            TTGTTGTTTCTGGTG  69 223
LCP49_RS06195 1317131 .. 1317141 +  -2.4  -3.59946   GGTGGGTGTTCGCGT                 CCAC TGT GCGG                 TTGTCTGATTGCAAC  52 73
         rrf 1317463 .. 1317487 + -13.5  -3.41878   GAGGATTCATCGGGC          GGGCCCGTGCG ATC TGCACGGGGCC          TTCTGCGTTCCCGGG  70 96
LCP49_RS06210 1318162 .. 1318188 + -25.2   -3.4678   CACCCCGACCAGCAA         GAGCCCCCGCCG GAT CGGCGGGGGCTC         TTCTCGTCTCCGGGT 100 30
LCP49_RS06240 NONE
LCP49_RS06245 1324097 .. 1324151 +  -4.3  -3.08813   CCTGCCGCTGCGTCC GGCCCCGTGAC-C-GCGTCCGCCGCCG TCCGT CGG-GCCTGATGCCGCGTCG-GGGGCC TCTGTTAGCGTCGCC  46 16
        treY NONE
        treZ 1328948 .. 1328996 +  -8.8  -3.41051   GTCCATGTACGGGTC CCACTCCCGGCGGGCGGCCTCG ATGTCGA CGAG-CAGCC-GCCGGGCCTGG TTCTCCTGGACCTCG  60 336
LCP49_RS06265 1331019 .. 1331054 + -18.2  -2.75382   CTTGTACGCTGAAAG    GGCCGGCCG-CGGCGCC CCG GGCGCCGGCCGCAGGCC    TCCTTAGCTCAGCTG  74 112
LCP49_RS06270 1331143 .. 1331185 + -32.9  -2.62184   ACCCCACCGCGGGCC CGACGGCGCCGCGCACCTCC GCCG GGAGG-GCGCGGCGCCGTCG TCGTGTCCGGCGCGG 100 40
LCP49_RS06275 1332864 .. 1332903 + -12.8  -3.53012   GCTCCTGACCGGAGC  CCGCCCCGGGCG-CCGG GACCTCG TTGGTCGCCCAGGGCGG  TTTCGAGCCCGGCGC  71 33
LCP49_RS06280 1333139 .. 1333160 + -17.3  -3.59979   AGATCCACCGCAGCA           GGGCCCTCC TCCG GGAGGGCCC            TTTCGCATCCCCGGG  91 33
LCP49_RS06285 1335447 .. 1335477 +  -5.2  -2.78384   AGCGGGGTGCCGCGC       GCACAGAGGGCCCG CAC CGCGGCCTCCGTGA       TCTGCTCCCAGCCGA  44 253
LCP49_RS06295 NONE
LCP49_RS06300 1337373 .. 1337430 +  -8.2  -4.16943   CGGGGCGCCTCCCGA GGCGTGCTGT-CGGGGGCCGTCC-GCCG TCCG CGGAAGGGCGGGCCCCGCACCGCGGACC TTTTGCACTCTCCCG  74 90
        groL 1339373 .. 1339386 +  -5.2  -2.70932   AGGCGCCCCGCTCAG               GCCG ACAGCG CGGC                TCGTTCCGCCGCCAG  42 140
LCP49_RS06335 NONE
LCP49_RS06340 1345074 .. 1345114 +  -8.9  -3.14132   CGCGCGAGGAGGAGT CGG-CGGTGCGGGC-GGTC ATCGC GTCCAGCCCGCCCTGACCG TTCATCCAGCGCAGC  56 441
LCP49_RS06350 NONE
LCP49_RS06355 1347440 .. 1347456 +  -9.3  -3.17763   GAAGCGGAATCGCGC              CCGCCCG TGC CCGGCGG              TTCCTAGACTCTCCA  56 46
LCP49_RS06360 1349488 .. 1349514 +  -2.1  -3.53012   CGCGTCGCGCGCGCC         GGTCCGGTGAG CGAGT CTAGCCGAGCC         TTTCAGGCCGCCCGC  49 149
        pcrA 1354450 .. 1354494 +  -9.8  -3.06696   GGCCCGGCCACGGAG GGGGC-GTCGACGTCGGCCGC GCCC GCGGGCGAGGCCGGCAGACCC TGTCTTCGACCAAGA  56 137
        sucC NONE
        sucD 1357139 .. 1357151 +  -3.3   -3.6968   CTTGTTGGCGTCGGT                GAGCG TGT CGGTC                TTCTTCGAGTTGTCG  55 524
LCP49_RS06405 NONE
LCP49_RS06410 1360425 .. 1360467 +  -3.1   -3.2614   GGGCGACTTGATCCA GGCCTTGCCGAAGTCCACC GGGAA GGTGCCCTCCTGCTCGGCC TTCGTCTCCGCGATC  47 320
LCP49_RS06425 NONE
        speB NONE
LCP49_RS06435 1366721 .. 1366736 +  -3.2  -2.60496   CCCTGAGAGTGTGCG              CCACCT TTCC AGGTGC               ATGTTTCAGCAACGG  40 71
LCP49_RS06440 NONE
LCP49_RS06445 1367974 .. 1368026 +    -9  -2.73364   CGGCGGACGTGGGCT GAGCC-GTCCGGCTCAGCC-CGGGCG TCC CGCCTGCGGCTCAGTCGGTCTGGGAC TCGTTGCGCTCGGGG  52 44
LCP49_RS06460 NONE
LCP49_RS06465 NONE
LCP49_RS06470 1372011 .. 1372025 +  -3.4  -2.79183   TCTCCCGGCGGATGC               TGGCGC GGC GGGCCG               TGTCGTCACCGTCGA  41 307
LCP49_RS06495 1378960 .. 1378973 +  -2.3   -2.7419   CCCCTCACCCTACGA               TGGGC GCAT GCGCA                TCGTTGCCCTCGTCT  39 489
        purN NONE
        purH NONE
        mgtE 1384338 .. 1384351 +  -5.2  -3.05384   CGCCGGGTAGATTGG               CGGG GAGTCA CCCG                TTCCCTGCCGACGAG  46 193
LCP49_RS06525 1386644 .. 1386682 + -32.5  -3.46602   ACGATCTGAGCGCCT   GGGGCCGGGCCGCGTGC GTGGA GCGCGCGGCCCGGCCCC   TTCTCGTGTCCGCAA 100 40
LCP49_RS06535 NONE
LCP49_RS06545 NONE
LCP49_RS06550 NONE
LCP49_RS06555 NONE
LCP49_RS06560 NONE
        ugpC 1398714 .. 1398770 +  -7.9  -3.01712   TCGTGACGGTGCGGT CC-GCGCCGGGCACGTCGCCCGCGCGTC GGCG GAC-CGCG-GTGACGCGCACGTCCCAGG TCTTGAGCAGGCGGA  52 472
LCP49_RS06585 1402741 .. 1402753 +  -3.3  -3.66018   GATGCGCTGGCCGAT                CGTAG CGT CCACG                TTCTTCCAGTACTCG  55 218
LCP49_RS06595 NONE
LCP49_RS06600 1406618 .. 1406634 + -13.7  -3.14132   CCGCCCAGCGGCGAA              CCCTGCG AAT CGCAGGG              TTCGTCGCCGAGGGG  67 48
LCP49_RS06605 1407748 .. 1407794 +   -17  -2.62184   GCCGCTGCGCCCGCC GGTCACCGCGGCGGCGTCCGCG GAG CGCGTGAGGCGCCGCGGCGTCC TGCTCTACGCCGAAC  70 94
LCP49_RS06615 NONE
LCP49_RS06625 NONE
LCP49_RS06630 1412643 .. 1412655 +  -3.4  -2.58544   ACCACGCCCCGCTCG                TGGT CGACT ACCA                GTTCTGACCGTGCAG  40 6
        trpS 1413801 .. 1413846 + -24.8  -3.31144   GCCCCGCGGCCTCCC GACGATGGCCCGCG-CCCCCG ACCTG CGGGGGACGCGGGCCGTCGTG TTCTCCGACTCGAGG 100 55
LCP49_RS06640 NONE
LCP49_RS06645 NONE
LCP49_RS06650 NONE
LCP49_RS06655 NONE
LCP49_RS06660 1418144 .. 1418174 +   -11  -3.51329   CGCGTCGGTGCAGTT       GAAGGTCGTGCGGC AGC GCCACACGCCCTCC       TTGTCGTTCAGGATC  67 296
LCP49_RS06685 NONE
LCP49_RS06690 1424380 .. 1424406 + -12.3  -3.53012   ACTCGCGCTCATCCG         GACGGGGCC ACCCGCACG GGCCCCGTC         TTTCCGCGGCCACCG  68 88
LCP49_RS06695 NONE
LCP49_RS06700 NONE
LCP49_RS06705 NONE
LCP49_RS06710 NONE
LCP49_RS06715 NONE
LCP49_RS06720 NONE
LCP49_RS06725 NONE
LCP49_RS06730 NONE
LCP49_RS06735 1434722 .. 1434760 +  -7.2  -3.17075   CTGAGGTCCCCGCTA   GGCTGAGGCCGTGTCCAC GCC GCGGGCACGACTTCCGAC   TTCGATTGAAGGAGA  50 142
         eno NONE
LCP49_RS06745 NONE
LCP49_RS06755 NONE
LCP49_RS06760 NONE
LCP49_RS06765 1440280 .. 1440323 +  -5.1  -3.28791   CGGCGTGTTGCGGGT TCGAGTCCCGCCGGGGGCAC CACGC GTCTCCCCG-CGCGCCTCGC TTCTGCGCCCACCGT  49 4
LCP49_RS06770 1441464 .. 1441478 +  -2.7  -3.72576   TGAGGGGGTCCCTCG               CCGCC ACTCA GGAGG               TTTCGTGACCGAGAC  55 128
LCP49_RS06775 NONE
LCP49_RS06780 NONE
        ilvA NONE
         mca 1448093 .. 1448110 +    -4  -2.91681   CGGGGCCGGTAGAGT             GGGGCG GCGTGA CACCCC              TGTCTGGCCTTCCCC  42 66
LCP49_RS06810 1448600 .. 1448644 +  -4.9  -3.14344   CTACGGCATGACCGT AGGCGTCTGCGGGCCTCGGCG CTGCC CGGCGGGGC--GCAGACCCCC TTCCTCGACACGCTC  46 120
LCP49_RS06820 1450585 .. 1450605 +  -2.4  -3.04263   GGGCGGCCAGCGGGC            CGAGGACG AGCAG CGCCGTCG            TGTTGCCGATCAGGT  42 354
LCP49_RS06830 1452660 .. 1452696 +  -2.2  -2.98823   ACCGAGGAAGCCCGC    CACCATGGCCCC TTGAAACGGGATT GAGGCCATGGGG    TCTGTGTGAGCCCCG  42 133
LCP49_RS06835 1453502 .. 1453526 + -10.7  -3.31792   GGATCACTCCGGGTG          GGTCATGGACA TGG TGTCCAGGGCC          TTGTCCAGCTGCTCC  63 128
        glpX 1457735 .. 1457766 + -12.2  -3.28712   GCTCGGGCACGTCCA      CGTGCTTCGGGGTG AGCC CGCCGCGCAGCACG       TTGTCCGAGGCCGCC  65 405
LCP49_RS06880 NONE
LCP49_RS11655 1464465 .. 1464478 +  -3.7  -3.28924   CGTCCAGGGAGCCCA               GCCGG TCCA CCGCC                TTCTCGACGGCGGTC  47 386
LCP49_RS06900 NONE
        ahcY NONE
LCP49_RS06910 1468387 .. 1468399 +  -4.8  -3.61398   CGCCTCCTCCATGGG                CGTG GGGTA CACG                TTCTTGCCGCCGGCG  57 469
        rsmI NONE
LCP49_RS06935 1475070 .. 1475108 +    -3  -2.78384   TCGGCATCGCCGACC  CGTGGGCGGCCGCGAAGG CCTGA CCCTCGC-GCCGAGC-CG  TGTCCTCCGGGGGCG  39 3
LCP49_RS06940 NONE
LCP49_RS06945 NONE
        rsmA NONE
LCP49_RS06955 NONE
LCP49_RS06960 1481904 .. 1481916 +  -3.3  -3.70417   GTGCGGCAGGTCGCA                CAGCC GGC GACTG                TTTCCGTCCTATAAT  57 62
LCP49_RS06965 1483479 .. 1483496 +  -8.3  -3.01924   ACCGTCAAGGCCGTG             GTCGCCG CCGA CGGCGCC              TATTGACCCCGGATC  52 2
LCP49_RS06970 NONE
        glmU 1485205 .. 1485224 + -13.6  -3.28712   GTCGGCGTGTCACAA            CCGTACCG ATTC CGGTACGG             TTGTGACACCAGAGA  70 61
LCP49_RS06980 NONE
LCP49_RS06985 NONE
LCP49_RS06990 NONE
        lepB NONE
LCP49_RS07000 1490126 .. 1490158 +  -3.1  -3.06796   GGCGAGGGAGGAGGT      CTGGGGGACGAGCGC CTC GAGCGCGGCCACGAG      TTCCATGGCCTCCGC  43 512
LCP49_RS07010 NONE
LCP49_RS07015 1492919 .. 1492946 +  -5.5  -3.22475   GGCGGCCATGGCCCA        GGGGTG-GTGGG CATGA CCGACGCGCCCC        TCTTCTGGCGCTCCG  51 10
LCP49_RS07020 NONE
LCP49_RS07025 NONE
LCP49_RS07030 NONE
LCP49_RS07035 NONE
LCP49_RS07040 NONE
LCP49_RS07045 NONE
LCP49_RS07050 NONE
        galE 1502356 .. 1502372 +    -3  -3.14132   AAGCGGCGACGAATA             GGC-GAA TCGG TTCAGCC              TTGCTGAGGGGACGA  43 25
LCP49_RS07075 NONE
LCP49_RS07080 1508184 .. 1508221 + -13.3  -3.29471   CCCTCCTGCCTGGCG   GGC-CGCCGCGGCGGCTC GCC GGGTCGCCTCAGCGAGCC   TTGATGTCGTGCGCG  68 49
        rfbB NONE
LCP49_RS07105 NONE
LCP49_RS07110 1514323 .. 1514347 + -12.8  -2.85847   AGCAGCTGAACCGGG          CCACCCGCCC CCGTC GTGCGGGTGG          TGTCCTGTCGGGGTT  62 32
LCP49_RS07120 1517340 .. 1517383 + -12.9  -2.68434   GGACCGCATCGTGGA GCGGTCCCGGCGCGCGGGC GTCTGA GCCGGCCCGCCGGCGCCGG TGCTATCCTGTCCAG  61 1
LCP49_RS07125 NONE
         pth 1519071 .. 1519110 +  -4.7   -2.9155   AGCACGGTGAACACC  CGCGCGACGGCCTGCGG CACCTC CCGCAGCGCGAAGCGCA   TGTGCTCTTGAGCCG  44 340
LCP49_RS07145 NONE
         mfd 1525222 .. 1525232 +  -8.2  -3.14132   GGTCTCAACGGTCAC                 GGCG CAC CGCC                 TTCGTCCAGGCCCAG  53 365
LCP49_RS07165 1527000 .. 1527027 + -20.6  -3.35679   GAGCGCCACCGCGAA        GGGTCCCGCCTC CTCA GAGGCGGGGCCC         TTCTGCATCCCCGGG  90 47
LCP49_RS07175 1530414 .. 1530433 +  -3.5  -3.19192   GGTCGAGCAGCGGAC            CCGGGACG GTCAG CG-CCTGG            TTCGGTTCCGTGCCC  45 500
LCP49_RS07210 1537193 .. 1537236 + -26.4  -2.52676   CATCTGACCCAGAGA CGACTTTCGGTCGTGAGATAG GCC CTATCTCACGACCGAAAG-CG TCCATTCCCCCGATG 100 34
LCP49_RS07245 NONE
LCP49_RS07250 NONE
LCP49_RS07255 NONE
LCP49_RS07260 NONE
        ligA NONE
LCP49_RS07270 NONE
LCP49_RS07275 NONE
LCP49_RS07280 1553148 .. 1553180 +  -4.1  -2.55216   TCTCCCGCCTCGAAG     C-GGTGGCGGCGGCC GGGCA GGCC-CCGGCACTAG     ATGTTGTGGGTCATG  40 125
LCP49_RS07285 NONE
        gatC NONE
        gatA NONE
        gatB 1557969 .. 1558012 +  -5.8  -3.41051   CCCCGAGCCACACGC GG-GCCCGGCGCGCCTCGG CCGCGTC CCGGGCCAGGTCGGGCACC TTCTCCTCGCCGTGC  52 193
LCP49_RS07310 1560058 .. 1560106 +  -3.5  -3.02511   TGGACCTGGCCGTCC TCGTCCTCGCCGCCCAGCCACTC GGC GAGGCGCTCGGGGGAGCCGGCGA TGTTCAGGCGCTCGA  43 150
LCP49_RS07320 NONE
LCP49_RS07325 1563937 .. 1563980 +  -6.6  -3.57039   CCTTGAGCGACCACA TGTCCGGCACCAGCGCGTCGT GCC GCAGCGCGATGGTGC-GCACG TTCTCGTTGTAGATC  56 454
LCP49_RS07335 NONE
LCP49_RS07345 NONE
LCP49_RS07350 NONE
LCP49_RS07355 1569180 .. 1569215 +  -9.6  -3.05384   CGGCGCCCAGCCCCG    CCGTCAGCGCCCCGCGG CGT CC-CAGGGCGGTGAGGG    TTCGGTCGCCCGCGA  54 371
        merA 1572968 .. 1572984 +  -4.4  -3.37796   TAAGGACCACGACTC             GCATCGC GCGG GCG-TGC              TTGTCGGTGCTGGGA  51 103
LCP49_RS07415 NONE
        dusB NONE
LCP49_RS07425 NONE
LCP49_RS07455 1590656 .. 1590690 +  -5.6  -2.78463   ACCGCCCAGAATGTT    GCCTTACCGTGACCG GAATCA CGGTCCCGG-GTGGC     TATGGTGGGCGACAT  45 40
LCP49_RS07460 NONE
        dnaG 1593297 .. 1593334 + -10.5  -2.82623   CCCAGGTCGTGTCAT   CGTCGTCGGCATCCACCG CGA CGATG-ATGCCGTCGCCG   TACTTCTCCAGGACC  56 432
LCP49_RS07475 1593931 .. 1593967 + -23.1  -3.18264   CGGGGGAGCCGAGCA    GAGGCCCCTGCACCGAC CAT GTCGGTGTGGGGGCTTC    TTCGTGCCTGGAGGA 100 30
LCP49_RS07525 NONE
LCP49_RS07530 1605028 .. 1605045 +  -3.3  -3.37796   AAGGCTGAGCGTCGG             GGTCGGC GAGT GTGGACC              TTGTGAATCGTGAAG  49 53
LCP49_RS07540 1606502 .. 1606539 +  -9.9  -3.28712   TGGACTCGCCGCCGT   CGTCGACG-GTTCCGG TGAGGGC CCGGATCGCGTCGATG   TTCTCGGGGACGACG  61 215
LCP49_RS07575 1614326 .. 1614336 +  -6.8  -3.53224   GCACCACCCCTGCCC                 TGGG TTG CCCA                 TTTCCGGCCCCCGTG  57 405
LCP49_RS07580 1616575 .. 1616599 +  -4.1  -2.98823   ATTGGAGATGGAGAA          CGAGGTCCTAC GGC GTGCGGCCGCG          TATCTGTCCCAGGCG  43 477
        glsA 1620951 .. 1621003 + -16.2  -2.59748   CGCGTTGACGCCTAG C-CGCCGCGGCGCCGTCGTC-GCGTG GGC CACGCCGCCGACGACGCCGCGCCCCG TCCCTTGTCACCCTC  70 44
LCP49_RS07605 NONE
LCP49_RS07610 NONE
LCP49_RS07615 1623979 .. 1624021 + -13.3  -3.73224   GATCCAGCCGCCATC GCGCGCACCCGGCCCGTCCC CCTG GGGGCGGGCC-GGTGATAGC TTTGCTCGAGAATGC  77 39
LCP49_RS11660 1625048 .. 1625079 +   -26  -2.62184   CGCCCTCCCAGCCCC      CGAGGCCCCGATCC CCAC GGATCGGGGCCTCG       TCGTCTGCGGGGAGG 100 53
LCP49_RS07625 1625833 .. 1625845 +  -4.7  -3.16564   TCGCGCATCCTCGTG                CCGGC GCC GACGG                TTGCTACCGTGGGAC  46 46
LCP49_RS07630 1627177 .. 1627210 +  -2.1  -3.08133   CCCGTCGGTAGGATG     GGCGGGTCCCGCGCG ATGC CGCGGGGGAGGGGCG      TTAGCTCAGTCGGTC  43 43
LCP49_RS07635 1627441 .. 1627458 +  -5.5  -2.80816   GGGCGAGCTGGCCGC             CGCCCAT GTAC ATGGCCG              TGTGGTAGATGCGGC  45 187
LCP49_RS07645 NONE
        rpsB NONE
         tsf NONE
        pyrH NONE
         frr NONE
LCP49_RS07675 NONE
LCP49_RS07680 NONE
        pdhA NONE
LCP49_RS07690 NONE
LCP49_RS07695 1639723 .. 1639743 +  -9.6  -2.82516   TGTCCTCGGGCACGT            GCGCCCGC AGCGG GCGGGCGG            TGTGCTCCTCCAGGA  53 271
LCP49_RS07710 NONE
LCP49_RS07715 NONE
LCP49_RS07720 NONE
LCP49_RS07725 NONE
LCP49_RS07730 1647409 .. 1647436 +  -3.4  -2.79302   GGGCGCGCTTGACGA        CGCAC-CCCTG GGGCCGA CAGAGTGTGCG        TGTCATCACAGTGAT  42 144
LCP49_RS07735 NONE
LCP49_RS07740 NONE
         dxr NONE
LCP49_RS07750 1652205 .. 1652215 +  -8.2  -3.21276   GGCGGACATCGTGGA                 GCCG GTC CGGC                 TGTTCTGAGCCCGGC  56 7
        ispG NONE
LCP49_RS07760 NONE
LCP49_RS07765 NONE
LCP49_RS07770 NONE
LCP49_RS07775 NONE
        nusA 1658906 .. 1658916 +  -3.2  -3.91897   CGGACGCGCTAGGAT                 GGAT GAG GTCC                 TTTCTCGATCCGACG  59 66
LCP49_RS07785 NONE
        infB NONE
        rbfA NONE
        truB NONE
LCP49_RS07805 NONE
LCP49_RS07810 NONE
LCP49_RS07815 NONE
LCP49_RS07820 1666484 .. 1666528 + -11.4  -2.78816   CCACCGCCACCGAGA GCAGCGTGGCCGCCGGGGAGCC GGC GG-TCTCCG-CGCCCACGTAGC TGTCCTCGACGGTGC  57 107
        rpsO 1667794 .. 1667838 + -35.7  -3.83026   CAAGTGACCTGAGGA GGCGGCGCCGGAGCCCGCGGG AGA CCCGCGAGCGCCGGCGCCGCC TTTCGTCTGCCCCCG 100 34
LCP49_RS07835 NONE
LCP49_RS07840 NONE
        dapB NONE
LCP49_RS07850 NONE
        dapA NONE
LCP49_RS07865 1677056 .. 1677114 + -23.3  -2.70932   GAGGCCTGACCCCTC CGGGTCGCCATGCCTGCCGTG-T-CCGCG GTT CGCGGTAGTTTGGTGGGCATGGCGACCCG TACTTCCCCCACGCG  89 32
LCP49_RS07870 NONE
        pgsA NONE
LCP49_RS07880 1681439 .. 1681460 +    -5  -2.52543   CGGCGCCCCGTCCCT           GGTGCCGG CCCAAC CCGGCGCG            TAGGTTCGGCGCGAT  41 71
LCP49_RS07885 NONE
LCP49_RS07890 NONE
LCP49_RS07895 1683602 .. 1683614 + -10.5  -3.02263   CCGCGACGCGCTGGC                GGGGC ACT GCCCC                TGTTCGAACACGTGT  58 43
        recA NONE
LCP49_RS07905 1685881 .. 1685897 + -13.7  -2.50113   CGAGGAGTGAGCGGA              TCCGGGC CGC GCCCGGA              GTTCCTAGAATGGTG  63 31
        miaB NONE
        miaA NONE
        dapF 1689523 .. 1689550 +  -4.7  -3.78934   GAGCATCCGGTCGAT        CCACGGCAGCAG CGAGT CCGC-GCCGAGG        TTCTTCTGCACCACC  60 185
        hflX NONE
LCP49_RS07940 1695598 .. 1695635 + -11.9  -3.30771   GGAAGGTCTTCACGG   TGGCCTCGTCGTCGAGG AGGG CCGCGACGATGTCGCCA    TTCTCCGCCGTGTCC  65 197
LCP49_RS07950 1696854 .. 1696878 +  -6.9  -3.16564   CGGCCACGCGGTGAC          GCACGGCGGGC CTC GCCCTCCACGC          TTCCTAGACTGGCGG  50 27
LCP49_RS07955 NONE
        hisB NONE
        hisH NONE
LCP49_RS07970 NONE
        priA NONE
LCP49_RS07980 NONE
LCP49_RS07985 1703217 .. 1703238 +  -2.8  -3.34398   CAGCAGGTTGTAGTC           GGCCAGCG ACATGC CGCAGTCC            TGTTTCAGGCGGCGC  48 461
LCP49_RS08005 1705997 .. 1706039 +  -8.3  -2.52896   GCGCAGCAACGGCTG AGTCCGCCGAGCGCGCGGCCG TCT CGGCGGCGC-CTCCG-GGGCG TGCCTTGACGCCTCC  48 25
LCP49_RS08010 1707862 .. 1707892 +  -3.9  -2.78384   GAGGCCTCCTGGTGC       TCGGCACACGC CCGCATGCC GCGTCGGCCGA       TCTCCTCGAAGCCGA  42 415
LCP49_RS08025 NONE
LCP49_RS08030 NONE
LCP49_RS08035 NONE
LCP49_RS08040 1715140 .. 1715167 +  -7.6  -2.62263   GCCATCTCCCAGGTG        TCCCAGGGCG-GC TGA GCATGCCCCGGGG        TGCTGTCCACGCCGT  46 11
LCP49_RS08045 NONE
LCP49_RS08050 NONE
LCP49_RS08055 NONE
LCP49_RS08060 NONE
        prfB 1718490 .. 1718503 +  -2.3  -2.52464   CGCCCCCGCGCGCCG               GTCCG GCAC CAGAC                TCCATTCCCACCCAG  38 195
LCP49_RS08070 1719720 .. 1719746 +  -3.7  -2.80056   GCGTCGTCGCCTGGC        GC-GCCTGTGAC CGGG GTCATAGACTGC         ATTTGAGTGAATCGT  42 140
LCP49_RS08075 NONE
LCP49_RS08080 NONE
LCP49_RS08085 NONE
        smpB 1723153 .. 1723192 + -15.6  -3.64198   CCGGCGTGGCCTGAG  CGCGGCAGGCCCCTTGGG AATG CCCGGGGGGCGTGCTACG   TTGTATCTCTCGCAG  83 27
        ssrA 1723668 .. 1723704 + -20.9  -2.62184   CCACTCACCACCACG    GGAAGGCCCCGGAATCG TCA CGATTCCGGGGCCCTCG    TCGTGTCCGCGCCCG  83 35
LCP49_RS08125 NONE
        rsrA 1729383 .. 1729421 + -25.4  -2.89564   CGGGCGCCCCGACGA   TGACGAAGGGCCGTCCCC TGA GGGGACGGCCCTTCGTGG   TCTCTGCGGTCGCCG 100 73
LCP49_RS08145 1735718 .. 1735732 +  -8.5  -2.78463   CCTGCTCGTTCCGCC               GGGGC CTGAC GCCCC               TATACTGGGCGGACT  50 55
LCP49_RS08150 NONE
LCP49_RS08155 1738245 .. 1738267 + -10.5  -2.73875   TTCCGGCCCGCGTGA           GCGTCGCGC GGTCG GCGCGGTGC           TACTGTTGAGAACCG  55 26
LCP49_RS08160 NONE
LCP49_RS08165 NONE
LCP49_RS08170 1741438 .. 1741451 +  -5.9  -3.30124   TGCGGTCCAGGGCTC               GGTCG ACGG CGGCC                TTCTGCCGGGTCGCC  52 418
LCP49_RS08180 NONE
LCP49_RS08185 1743259 .. 1743292 +  -4.3  -3.28712   GGGCCCGGCTCAGGC     GCGCGTGGCCCGGGC GAGC GCCTGACGCACCCGC      TTCTCGGAGACCGAG  49 56
        putP 1749079 .. 1749104 +  -6.7  -3.15663   ACCGCAGCCGCCGCA         GATCCGCGCGC GCAG GCGTGAGGCTC          TTCCTCGCGATCCGT  50 5
        thpR 1749759 .. 1749780 +  -5.1  -3.62046   TCAGCCCTCCAGGGG           GC-CCTGCAC CGC GTACAGGCGC           TTGTTGGCGAACTCG  56 95
        thiD 1759372 .. 1759407 + -24.8  -3.10796   CCGCAGAACCCAGAA    GAGCCGGACCACCGTG TCGC CACGGGGGTCCGGCTC     TGTTCGCTCGTGCCC 100 176
LCP49_RS08255 NONE
        thiS NONE
LCP49_RS08265 NONE
        moeB 1763891 .. 1763939 + -36.2  -3.33696   CCCCATCCCGACGAA CCCTGCGAGATGGCCCCCACCG CGGGC CGGAGGGGGCCATCTCGCAGGG TTCGTTCGCACGCGC 100 42
        argS NONE
        lysA 1767217 .. 1767245 +  -7.9  -2.52464   CGGACACCGAGTGTC        GCGCGGTGGGACG GGC CGGGGCGCCGCGC        TAGATTCGAGGCCAG  48 102
LCP49_RS08285 NONE
        thrC NONE
        thrB NONE
         rho 1773134 .. 1773145 +  -2.2  -2.62184   GCACGGCCCCGTCTC                GC-CC GGG GGAGC                TCGTCTCCGCCGGAC  38 51
        prfA NONE
        prmC NONE
LCP49_RS08315 1775945 .. 1775981 +  -2.1  -2.96692   CGCTGCGGCGCGCCC   CGC-CGACCGGGAGGCC TGACC GGCCCCCATG-CGCGCG   TATCTCGTCCTGGTC  42 7
LCP49_RS08320 NONE
LCP49_RS08325 1777572 .. 1777592 +  -5.3  -3.32844   CGAAGACACCGAGCC            GGGGGCCAT GCC GTGGGTCCC            TTCTGCGGTACGGAG  51 54
        atpB NONE
LCP49_RS08335 NONE
LCP49_RS08340 NONE
LCP49_RS08345 NONE
        atpA NONE
LCP49_RS08355 NONE
        atpD NONE
LCP49_RS08365 NONE
LCP49_RS08370 1785640 .. 1785695 +  -8.1  -2.70932   CGAGGGTGTGGCCGT CGCCGAGCAGGCTGATCTGC-TCGGC CAGCA GACGCTGCAGATCCGCCTCCACGCCG TCCTTGACGAGGCCG  49 354
LCP49_RS08380 NONE
LCP49_RS08390 1788869 .. 1788883 +  -3.4  -3.18264   GGCCGCAGCGCTGTT               CTGAGG GAC CCACGG               TTCATCCCTGAGGAG  47 22
LCP49_RS08395 NONE
LCP49_RS08400 1791335 .. 1791347 +  -4.7  -3.28712   GGCCGAGACCTACCA                GGCCG TGG CCGCC                TTCTGAGGGGCGCGG  49 7
LCP49_RS08405 NONE
LCP49_RS08410 NONE
LCP49_RS08415 NONE
        clpS NONE
LCP49_RS08440 NONE
        murI NONE
LCP49_RS08450 NONE
         rph NONE
LCP49_RS08460 NONE
LCP49_RS08465 1804142 .. 1804199 +    -6  -2.79302   AGGGCGCCGGGGGCG CCGGGGTCGGCGTCGACGGTGCCGGCC AGGTC GACCGCCGCGGT-GACGGCGGCGCGGG TCTCCTCGGCCTCCT  46 371
LCP49_RS08475 NONE
LCP49_RS08480 1809756 .. 1809796 +  -5.3  -3.14344   AGGTCATGCCGCGGT  CGCGGCGGTACTGGTTGAT CAG GTCGATCAGCACGATCGCG  TTCGTCACCACGATG  48 494
        ilvD NONE
        nagB NONE
LCP49_RS08530 1821314 .. 1821332 +    -3  -4.06491   ACCCCGACCGCCCGG             TCGTCTCA CGA TGTGACGC             TTTATCTCACATTGC  60 64
LCP49_RS08535 NONE
        ilvN NONE
        ilvC 1825157 .. 1825172 +    -6  -3.05384   AGGCTCGGACCGGAG              CGCGGG CCGG CCCGCC               TTCCATCCCACCGCA  48 124
        serA 1826821 .. 1826849 +  -7.2  -3.09289   CGTCGACGCCCGGGC        GGGCATCGCGGG GCCGG CGCGCGTCGCCC        TGTGTTGAGATGGTG  50 43
LCP49_RS08555 1827592 .. 1827630 +  -8.9  -4.08216   TGGTGCAAGGCGGCA  GGAGCA-C-GGTCGAGGGC ATG GCCGTCGACCAGGTGCTCG  TTTTCACCCGCCTGG  71 498
        ribA 1830249 .. 1830263 +  -8.5  -3.05844   TCGCGTCGCCGGCCG               GCGCC GACGG GGCGC               TGTTCGGCTGCCCGG  53 492
LCP49_RS08595 1834807 .. 1834822 + -11.8  -3.14344   ACGCATGGCAATGGC              CGCCGC GGAG GCGGCG               TTGATGGACCGGGTG  63 79
LCP49_RS08610 1837003 .. 1837023 +  -4.6  -2.87132   CCATCTGTGGGCACC           GCG-GCCGC AAGG GCGACCCGC            TCTATGCCGCCCGCC  44 107
LCP49_RS08620 NONE
        metG NONE
LCP49_RS08630 1841038 .. 1841051 +  -3.1  -3.01712   GAGGAGTGATCCCAC               CGTGTC CGA GAC-CG               TGTTCACGCGGCAAC  43 170
LCP49_RS08635 NONE
LCP49_RS08640 NONE
LCP49_RS08645 1844804 .. 1844858 +  -3.4  -3.72576   CATCGGGTGGGGTGT CCGGCGACGGCGC-CCGCCGCTCACCC ACTA GGCTG-GCGGCCATGCGCA-TCGCCCG TTTCGTGGACCAGGC  57 174
LCP49_RS08650 NONE
        gltX NONE
LCP49_RS08660 NONE
LCP49_RS08665 1848300 .. 1848314 +  -5.6  -2.62396   GGAGACGCTCGGACG               TGGCGC ACG GCCCCA               TCGTATAGCGGCCTA  44 70
LCP49_RS08670 NONE
LCP49_RS08675 1848588 .. 1848619 + -20.2  -2.64616   GGTCACCCGAGTGAC      AGGAAGCCCGGTCC CTGC GGACCGGGCTTCCG       TCGTCTGCGTCGGCC  81 34
LCP49_RS08680 NONE
LCP49_RS08685 NONE
LCP49_RS08690 NONE
        leuC NONE
        leuD 1858084 .. 1858130 + -14.2  -2.78384   CACGGCCGGCTGACC GGCCGCCGCCGGGAGCGCAC CATTGCC GCGCGTGCCCGGCGACGCCC TATGCTGGGAGGCGA  64 28
        murA NONE
LCP49_RS08720 NONE
LCP49_RS08725 NONE
LCP49_RS08730 1862633 .. 1862687 +  -8.6  -3.45023   CGAGCTGGCCTGGTC CTTGCCGAACAGCACCTCTACGGCCG GGTCA CGGCCGTAG-G-TGGTGATCCGCCAG TTCTCGTCCTCGTCC  58 151
LCP49_RS08740 NONE
LCP49_RS08745 NONE
LCP49_RS08750 NONE
        rsmD 1868033 .. 1868050 +  -3.3   -4.4078   CTTTCGTTCGGGAAA             CGGCGGCG TGT CGGC-CCG             TTTTCGTTCGGGAAA  71 54
        coaD 1870080 .. 1870126 +  -6.3  -2.55544   GGCCGCGGTCCTGCG CGGCCTCGACGGCGGGGCCTGAC CCC GCCCGGCCCACCCG-CG-GGCCA TCCCTTCGCTCGTCC  44 4
        galU 1871090 .. 1871116 +  -8.6  -3.53012   CGGGCTCTGAGCCGG         GCCGGCGACG CGCGGAC CGCCGCTGGC         TTTGGCCGAGGCGGA  59 31
LCP49_RS08775 NONE
        rpmF 1872046 .. 1872093 +  -8.3  -3.03771   CGCCTGAGATGGCGT CCCCATC-GGCTC-GCCGCGGGC CTGA GCCCGCGCCCGAGCCAGAAGAGC TGTTCGAGCGTCTCG  52 34
         rnc NONE
        mutM NONE
LCP49_RS08795 NONE
LCP49_RS08800 1876167 .. 1876185 +  -3.1  -3.54424   GCCCGACGTGCGTTG             CGGTC TTCCTGTGC GACCG             TTTCGACGAATGAGG  50 139
        wecC NONE
LCP49_RS08810 1879317 .. 1879336 +  -2.8  -3.16564   GAGCCCCGAGATGCG            CCGTCGC CTGTCCC GCG-CGG            TTCGTGCGATGCCCG  44 119
LCP49_RS08820 NONE
LCP49_RS08825 NONE
LCP49_RS08830 NONE
LCP49_RS08835 NONE
LCP49_RS08840 NONE
LCP49_RS08845 NONE
LCP49_RS08850 1888125 .. 1888139 +  -3.5  -2.73875   CGAGGGGAGGAGAAC               GCATG AGCGC CGTGC               TGCTGTTGACGGCCG  41 20
LCP49_RS08855 1890255 .. 1890286 +    -5  -2.78384   GCGCGGCCGTCGGTC      TGGACGCCTGAGCCG GGC CGGGCCAGGTG-CCG      TCTCGTCCCGGCCCG  42 15
        wecB NONE
LCP49_RS08885 NONE
LCP49_RS08895 1903142 .. 1903164 +  -2.6  -2.65264   GCCCGTGTGACAGAC           TGGGCCCG TGGAAAT CGTGCTCA           TAGTCTCAGTCGTGG  38 66
        ftsY 1904377 .. 1904407 + -22.6  -3.12351   CCGCACCCCGGTCCT       GGGCCCCTACCGAC GTC GTCGGGAGGGGCCC       TTCCCTGTCACGGAG  93 45
LCP49_RS08905 1905823 .. 1905843 +  -3.1  -3.18681   CGCGGTGAGCCGCCG            CGGACGGGT GAG GCCGGTCGG            TTGCTAGGCTTGGCG  47 33
         ffh NONE
        rpsP NONE
LCP49_RS08920 1908418 .. 1908458 + -21.9  -2.62184   CCTGACGGCCCGTGA CGCACGGCCCGCCCGCCC CTCACC GGGCCGGCGGGCCGT-CG  TCGTCTGCGGCCCCG  86 36
        rimM NONE
        trmD NONE
        rplS NONE
        lepB NONE
        lepB NONE
LCP49_RS08950 NONE
LCP49_RS08955 NONE
LCP49_RS08960 NONE
LCP49_RS08965 NONE
LCP49_RS08970 NONE
LCP49_RS08975 1917578 .. 1917591 +  -5.2  -2.70932   CACCGCGACACGCAG               GGCG CCGCGC CGCC                TCGTTGCCGGCCCAG  42 77
LCP49_RS08980 1918639 .. 1918668 + -14.9  -2.66435   CGCGCATCGCACGGG       TCGCGCCCAGGCC CTCG GGCTCGGGCGCGG        TGATGTGGTGGGAGT  66 464
LCP49_RS09015 NONE
LCP49_RS09020 NONE
LCP49_RS09025 NONE
LCP49_RS09030 NONE
LCP49_RS09035 1929114 .. 1929168 +  -8.3  -3.32343   CTCGGCCAGGGCCGC CGCCACCGCGAGCG-GAACGTCCGCCC GGC GTGCGG-CGGCCACGATCGCCGCGGCG TTGTCGAGGTGTCGG  55 453
LCP49_RS09045 1929878 .. 1929907 + -12.7  -3.14132   CGACGAGCTCCTGGG       CGTCGGCCCGCGC GGCT GAGCCGGCCGGCG        TTCGTCGGCCCGGGG  65 7
        ppk2 NONE
        gndA 1933066 .. 1933104 + -18.8   -3.0263   GGATCTCGATGCCCG   TGGCCGCCCGCGTGACCT GCG AGAGCACGCGGGCGGGCA   TCTTCAGCCGGTCAT  82 434
LCP49_RS09075 NONE
LCP49_RS09080 NONE
LCP49_RS09085 NONE
LCP49_RS09090 1937948 .. 1937970 +  -6.9  -2.90194   CCCCGCCTCCAGGAG          CGCGCGGGCC ACGA GGCC-GCGGG           TGTGCTTGGCGAAGT  48 213
LCP49_RS09100 1939057 .. 1939073 +  -7.9  -3.51924   CGTGAGGCGGGACGG              ACCGGCT GTA AGCCGGG              TTCTGTGCCTCGCGC  59 55
LCP49_RS09110 1941030 .. 1941064 + -25.1  -2.62184   TGACCCGCCGATGAC     CGATGGCCCGTCCCC GCGGA GGGGACGGGCCGTCG     TCGTGTGCCGACCGG  93 38
LCP49_RS09125 1942911 .. 1942921 +  -8.2  -3.28712   TCGGCTACACCGCCC                 GGCC GTC GGCC                 TTCTGACACCGCCCC  56 9
LCP49_RS09130 1945133 .. 1945155 +  -6.9  -3.36273   CGAGCTCCGGGCCGG           CGCCCTCGG GGACG CTGATGGCG           TTGATCTTCACGACG  56 204
        tcmP 1947818 .. 1947828 +  -5.4  -3.02471   GCAGTGAGCGCTTCG                 TCAG CGC CTGA                 TATGTGTGCTGCGGC  46 401
LCP49_RS09155 NONE
LCP49_RS09160 NONE
LCP49_RS09165 1950158 .. 1950194 +  -5.6  -3.61398   GCGGCGGCCGCGGGC   GGTCTTGG-GGACGCCG AGGA CGGCGCCCTCCTTGCCC    TTCTTCCAGGCGCGG  58 500
        mptB NONE
        mptB NONE
LCP49_RS09195 1956987 .. 1957042 +    -4  -3.29144   ACGTGGCCAGCTCGT CGCCGATGTC-CCCGTG-CAGCCCG-AC GTGG GTGCGGGCCGTCAGGTGCGGCA-CGGCG TTGTCGGCGGCCTCG  48 262
LCP49_RS09210 1959265 .. 1959277 +  -4.7   -2.5547   CACCGACTAGCCTGG                GCCGC ATG GCGGA                ATTCATCTACACGAT  42 119
        ettA 1961276 .. 1961334 +  -9.2  -3.04144   TGGCCACGAGCGTCC CGTCCTCGGTGAACACGGCGCCCGTGCC GAG GCCGCGCGCGCCCTGGGCGCTGGGGGAG TCTTGGACGTAGAGC  54 349
LCP49_RS09225 1962962 .. 1962993 +  -2.1  -3.29144   GCCCGCGCCCCATGT      CGGGGCGCGGACCG CGGGC CGGTCAG-GCCGAG      TTCTGCAGGGAGTGG  45 41
LCP49_RS09250 NONE
LCP49_RS09255 1970329 .. 1970382 + -18.2  -3.29829   AGCCGGCCCGCCCCG GGGCAGGGGGTCGGGTGGGG-CCGTC AGTA GACTGACCCCACCCGACCGTC-GTCC TTCTGGAGGAGTCTG  81 40
LCP49_RS09260 NONE
LCP49_RS09265 NONE
LCP49_RS09275 1973032 .. 1973048 +  -2.1  -3.14132   GCGTCGGGGACGACG              GCGGGGT GTA GCTCAGC              TTGGTAGAGCGCGCG  43 108
LCP49_RS09280 NONE
         tig 1974654 .. 1974690 +  -7.3  -2.62983   CGCCAACAGCGAAAC  GCCGACGGCGTCCCGCGC GCTG GCCCGG-ACGCC--CGGC   TAGTGTCGGACTCGA  46 166
LCP49_RS09290 NONE
LCP49_RS09295 1976137 .. 1976167 + -11.8  -2.54523   GGTCCGGCCGCGCGG      CCGGGCCCCTCGG CGCCGA CCG-GGGACCCGG       TCCCTTAACGTGTCC  57 60
        clpX NONE
LCP49_RS09305 1978747 .. 1978765 +  -2.3  -3.55801   TGGCCACGGGAACTG             CCCGGTG CTGGC CATCTGG             TTTGCCCGCGTTGCT  49 524
        istA NONE
        istB 1981220 .. 1981237 +  -5.5  -3.40403   AAACGGGCAAACCAG             CTGGCCA CCAG TGGGCAG              TTCTGATGGCCACCA  53 70
LCP49_RS09330 NONE
LCP49_RS09335 1986178 .. 1986191 +  -3.7  -3.16564   GTCGACGATCTTGGG               GCCGG CATG CCGGG                TTCCTAGCGTGGCGG  44 112
LCP49_RS09340 NONE
LCP49_RS09345 NONE
        cysD NONE
LCP49_RS09355 NONE
LCP49_RS09360 NONE
LCP49_RS09365 NONE
        cobA NONE
LCP49_RS09375 NONE
LCP49_RS09380 1996253 .. 1996277 +  -7.7  -2.70932   ACCGCGTCCGCGGCC          GGCCGGAGGGT CGG GCCCTCGGGCG          TCCTTGCACGGAACC  47 239
        ileS NONE
LCP49_RS09390 NONE
LCP49_RS09400 NONE
         ndk 2002573 .. 2002589 +  -2.1  -2.62184   CACGATCATGCAGTA              GAGGCAC AGC GTGCCGA              TGCTGTAGACGGCCG  39 316
LCP49_RS09415 2006605 .. 2006663 + -13.8  -2.57501   CCGCCGCGGCCGCTG AC-CGTCGTCG-GT-GCCGCCGCCCCGGG CCCG CCCCGGGCGGCGGCGACGCGCCGACACGC CTCTGTTTGGTCCGG  63 25
        rplU NONE
        rpmA 2007437 .. 2007449 +  -4.7  -2.63102   GGTCGTGGACATCGT                CCCCG CCG CGGAG                TGATCTGACACTCGT  42 10
        obgE NONE
        proB NONE
LCP49_RS09440 NONE
LCP49_RS09445 2012105 .. 2012159 +   -25  -3.29471   TCCGGTCACTGACGT CTCACCGGCCCGCCGCGTCGCCGCC TCCGCC GGGGGCGACGCGGCGGGCCG-TCCG TTCGTCTCCTGAGCG 100 29
        nadD NONE
        rsfS NONE
LCP49_RS09460 2013937 .. 2013947 +  -2.4  -3.53012   TGAGGGCACCCCGGC                 CCGG ACG CCGA                 TTTGGCGCCCGCGCG  49 38
LCP49_RS09465 2014129 .. 2014152 + -19.6  -3.23216   CTCCACGAGTCAGAA          GGCCCGGTCC ATAC GGACCGGGCC           TTCGTCGTCGTCGGG  89 34
LCP49_RS09475 2015591 .. 2015614 + -19.6  -3.23216   CTCCACCAGTCAGAA          GGCCCGGTCC ATGC GGACCGGGCC           TTCGTCGTCGTGGGC  89 33
LCP49_RS09485 2016122 .. 2016145 + -19.6  -3.23216   CTCCACCAGTCAGAA          GGCCCGGTCC ATGC GGACCGGGCC           TTCGTCGTCGTACCG  89 33
LCP49_RS09490 NONE
LCP49_RS09500 NONE
LCP49_RS09505 2022082 .. 2022103 +  -2.1  -3.37796   CTTCGCGACCTGGGT           GTGCGCGGGC TTC GCCGGC-CTC           TTCTACGTCGTCACG  47 472
LCP49_RS09515 2024425 .. 2024449 +  -4.1  -2.73681   GAGCACGCCGATGAA          CAGCACCGCGT TCG ACGGGGTCCGG          TACTTCGGGTGGATG  42 500
LCP49_RS09525 2026266 .. 2026303 +  -7.7  -3.41051   CGATCGCCATCATCG   CGCCG-CGGCCGCG GACCTCGGCGA TGCGGTCGTCGGCG   TTCTGCTCGAAGTGG  56 322
LCP49_RS09535 NONE
LCP49_RS09540 NONE
LCP49_RS09545 NONE
LCP49_RS09550 2031808 .. 2031845 +  -4.9  -2.56596   GAGTCGATAGCGCTT  CGTCAC-CGGACAGTGA CCCGCC TCAC-GTCCGCGCGGCG   TAGATTCGTGCCGAA  42 87
LCP49_RS09555 2033081 .. 2033104 +   -21  -3.16191   CACATCGGCACGATG          CGGCGGCCCC CTGC GGGGCCGCCG           TTCGTCGCGATGTCC  88 114
        nrdH NONE
        nrdI NONE
        nrdE 2036660 .. 2036680 +  -7.6  -3.55444   GGCGTATTCCGCGCT           TCTGAGCGC AGGT GCGCTC-GA            TTTCCCGCCTCGAAG  57 68
        nrdF 2037877 .. 2037916 + -35.2  -2.62396   TGAGCCCCGTCCCGA  CGACGGCCGGTCGCCTCC CCAC GGAGGCGACCGGCCGTCG   TCGTCTCGCGAGATG 100 52
LCP49_RS09585 NONE
LCP49_RS09590 NONE
LCP49_RS09595 2041052 .. 2041104 + -26.4  -3.30159   CCCCGGCTCGGCCCA CGCCG-TGACGGCCGGTGACATCCC CGCG GGGAGGTCACCGGCCGTCGTCGTCG TTCTGGCAGACTTCG 100 42
LCP49_RS09600 NONE
LCP49_RS09605 2042794 .. 2042819 +  -3.2  -3.05596   GGGCGGCCCGTCAGG         CCGTGAGATC CGCGAT GATCTCCCGC          TTGCGTCGCGGGGTG  44 62
LCP49_RS09625 NONE
LCP49_RS09630 2046595 .. 2046608 +  -3.1  -3.32963   GTGATCGGATCGAGA               CGGATC CGA GA-CCG               TTCTGAACTCCCCCT  49 100
LCP49_RS09635 2047470 .. 2047513 + -29.6  -2.78384   CCCGGCCGACGAGTG GGCCGCGGGGCGGTGGACGG GAGA CCGTCGGCCGCCCCGCGGTC TGTGCTCAGCCGGCC 100 45
LCP49_RS09650 NONE
        dnaE NONE
        thrS NONE
LCP49_RS09665 NONE
LCP49_RS09670 2057586 .. 2057632 + -11.3  -3.65046   CGCCGGCGGCCTCGA GGGCGGCGACGGCCGGCGTGG CCGCC CCGTGCCGGGCGCCGCGATCC TTCTTGCGCTGGCCC  71 506
        zapE NONE
LCP49_RS09715 NONE
         def 2062598 .. 2062612 +  -3.5  -2.62184   GCCCGATGACCGCCC              CGACGC CCCT GCG-CG               TGCTCTACGCCGGCA  40 32
LCP49_RS09725 NONE
LCP49_RS09730 NONE
         rpe NONE
        pnuC NONE
        ribD NONE
LCP49_RS09750 NONE
LCP49_RS09755 NONE
        ribH 2070632 .. 2070656 +  -7.7  -3.26649   GGGCGGCCGGGCGGG          GGGCGGCCTGC TGG GTCGGCTGCTC          TTGATGTGGCCCTGT  53 41
LCP49_RS09765 2071913 .. 2071959 +    -5   -2.9302   ATCTTCGTGCTCAGC CCGCCACGGGAGC-GCCCGAT GCCGTG ATCGGCCGGCTCCTCACGCGG ATTCTTGTAGTTCGA  45 483
LCP49_RS09780 NONE
LCP49_RS09785 NONE
LCP49_RS09790 2074266 .. 2074298 +  -2.5  -4.84311   CAGGTCCGATACGCA      GGGGTGCCAGTAAGT AGG GCTGATCGGCGCCCA      TTTTCTTGTCTCGCG  79 200
LCP49_RS09825 NONE
        hisG NONE
        hisF NONE
        hisI NONE
LCP49_RS09845 NONE
LCP49_RS09850 NONE
LCP49_RS09855 NONE
        trpC NONE
        trpB NONE
        trpA NONE
         lgt 2091080 .. 2091108 +  -2.2  -2.62184   TCGGCCCCGAGCGTC       GGGGCCAGCGCCG TCCC CGTC-CGAGCCCC        TGCTCTCCGGAAAGG  38 177
        gltB NONE
LCP49_RS09885 2097261 .. 2097300 + -14.8  -2.80935   TCTCATCTTCCGACG  CCACGCGGGCCCGCCCTC CACC GAGGGCGGGCCCGCCCCC   TATCGTGGGTCGCAT  68 49
         pyk 2099031 .. 2099044 +  -3.7  -3.05384   CGCAGCTCGTCGAAG               CGGGC CACG GCCAG                TTCGATGGCGGGGAC  43 255
LCP49_RS09900 2099683 .. 2099694 +  -2.2  -2.62735   CGGGCACCGTCGGCG                CGCGG CCA CC-CG                TCGTGTGCGCCGTGT  38 35
LCP49_RS09905 NONE
LCP49_RS09910 NONE
LCP49_RS09915 NONE
LCP49_RS09920 NONE
LCP49_RS09925 NONE
LCP49_RS09930 2106152 .. 2106168 + -13.7  -2.75064   GGGCGCCGCCGTGCA              GCAGCCC GAC GGGCTGC              TCGTTGCCTGCCACG  64 320
        polA NONE
LCP49_RS09945 2110656 .. 2110671 +  -4.6  -2.86492   TCTGATACGCTGGAC              GAGCAC ATTC GTGCGC               ATTTGATACATGTCC  44 36
        rpsA NONE
        coaE NONE
        coaE NONE
        uvrB NONE
LCP49_RS09980 NONE
LCP49_RS09985 NONE
LCP49_RS09990 NONE
LCP49_RS09995 2123850 .. 2123898 +  -7.1  -3.21276   TCGAGCGAGAGGTCC CGGTCCACGTACACGTCGTCGGC GTA GACGGCGGCGGCCACGGGGACGG TGTTCTGCGCCAGGG  53 250
LCP49_RS10010 NONE
        uvrA NONE
LCP49_RS10025 NONE
        uvrC NONE
        rapZ NONE
        yvcK NONE
        whiA NONE
LCP49_RS10050 2138934 .. 2138947 +  -5.2  -2.66316   GGCCTGATCCACACC               GCGC ACCGGG GCGC                TGATGTCGTGGCCCC  42 34
         gap 2140135 .. 2140154 + -10.6  -3.18264   GAGCCCGCACGGCGC            CCGACGGC CCGG GCCGACGG             TTCCTCCGTCGGCCC  61 39
LCP49_RS10060 NONE
        tpiA 2142251 .. 2142293 +  -2.5  -3.35679   AGTTTGCTAAGATCG TCCGGTTCGACCAGGCCTGA TCCG TCCGGCCCGACCGA-CCGCA TTCTCCGTGACGGCC  47 6
        secG NONE
LCP49_RS10100 NONE
LCP49_RS10120 NONE
        sufB NONE
        sufD NONE
        sufC NONE
LCP49_RS10140 2159251 .. 2159265 +  -7.8  -2.78384   ACTGGCGGATGTCGG               GCTCCT GCT GGGAGC               TCTGGTAGCCGCGCA  49 184
LCP49_RS10150 2162145 .. 2162155 +  -6.8  -3.30124   CCTCGTCCAGGGTGG                 GCTC GAC GAGC                 TTCTGCGGCATCGAC  53 301
LCP49_RS10170 NONE
LCP49_RS10175 2165531 .. 2165543 +  -3.4  -2.90194   CCGCAGCCGGCCGCC                TCGA GCAGG TCGA                TGTCGTTGGCGCCGT  42 211
LCP49_RS10185 NONE
LCP49_RS10190 NONE
LCP49_RS10195 NONE
LCP49_RS10200 NONE
LCP49_RS10205 2170409 .. 2170422 +  -5.9  -3.63782   CCGTCCGGCACGCTT               CCGTC CGGG GGCGG                TTTGCGGTGGTATTC  58 63
LCP49_RS10210 2171481 .. 2171507 + -19.4  -2.78935   GGAATGGTCACGACA         CGCCGCCTCGCC CGA GGGGAGGCGGCG         TGTCGTGACCACTCT  77 44
        glgA 2176905 .. 2176948 + -12.3  -2.57132   GACGGGGGCCCGTGT GCGTC-CGGGGGCGGCCACGG TCAG CCGCGGC-GACCCCGCGCCGC CTTCTCGCGGGCGCG  57 82
LCP49_RS10240 NONE
LCP49_RS10245 NONE
LCP49_RS10250 NONE
LCP49_RS10265 NONE
LCP49_RS10275 NONE
LCP49_RS10280 NONE
        mshC 2191618 .. 2191633 +  -4.6  -2.79302   GACTCGCCCGAGGCC              TCCGGC AGCT GCTGGG               TGTCCTGGGCCTCCT  42 112
LCP49_RS10295 NONE
LCP49_RS10300 NONE
LCP49_RS10305 NONE
         arc NONE
         dop 2199131 .. 2199159 +  -6.5   -3.2614   TGCGCAGGACGCCCT        CCAGGCCCTCGTC GCG GAGGGGGCCCAGG        TTGGTCTCGAGGGTG  52 136
LCP49_RS10330 NONE
        pafA 2201825 .. 2201882 + -11.4  -2.60075   CCGTCGACCGGCTGT TCGAGCGGATCG-CCTGACAGCGCGCGTC CAG GACGCGC-C-GTTAGGGTGACCCGCATGA GTTCGTTCGAGACCC  57 9
LCP49_RS10340 NONE
LCP49_RS10345 NONE
LCP49_RS10350 NONE
LCP49_RS10355 NONE
        tatC NONE
LCP49_RS10365 2209758 .. 2209779 +  -7.2  -3.01712   ACTGACACGGGCTAG           GGTGGGCG GGTGAG CGCACACC            TGTTGACCCGCGGCA  49 36
LCP49_RS10370 NONE
LCP49_RS10375 2211752 .. 2211796 +  -9.8  -3.65522   GTCGTGCATGGGGGA GCGGCGGGTCAGGCGTCGACG TCCT CGCCG-CGGCTGGCGCGCAGC TTGTTGAGCTGGATC  66 94
LCP49_RS10395 2216225 .. 2216235 +  -4.6  -2.62184   TCAGGGCTACGGTCG                 GGGC ATG GCTC                 TCATCTACACCGCAC  42 81
LCP49_RS10400 2217187 .. 2217231 +  -9.8  -3.05463   CCACATCGGGACCTG GCCCAGG-AGGTCGCGCCGGC CGAC GCCGGCGCCGCGTGCCGGGGA TTCACTCCCCCGGGT  56 435
LCP49_RS10415 NONE
LCP49_RS10420 2218851 .. 2218893 +  -8.3  -3.01924   CAGCGGTCCAGGACG TCACGCGCGGCGCCGGAGTC GATC GACTC-GGCGGCCCGCGCCA TGTTGGCCGCCAGTC  52 117
LCP49_RS10430 NONE
LCP49_RS10435 NONE
LCP49_RS10440 NONE
LCP49_RS10445 2224590 .. 2224602 +  -6.2  -2.92463   CCAGCGCCCCGCCCC                CCCG ACTGC CGGG                TCTCTGCGTCCTGCG  47 176
LCP49_RS10485 2234830 .. 2234874 +  -6.2  -3.04461   CGAGGCGCTCGGCGA GCGCCCC-GACGGCGCGCACG TCGT CGTCCGCCAGGTCCGGGGCGA TCTTCACGGTCAGTG  48 433
LCP49_RS10495 2237067 .. 2237120 +  -7.9  -2.71144   CGCATCCGGCCGGCC CGGACCTCCTCGGCGATGGCCTGGAC GCC GTCCAGGATCTCGGCGCGGCTG-CCG TAGTTCACGCACATG  50 311
LCP49_RS10550 2248410 .. 2248432 +  -7.6  -2.78816   CGAGCACTGATCTCG           GCGCGGCC CCCGCCC GCCCGCGC           TATGCTGGCCCATGC  47 31
LCP49_RS10555 2248911 .. 2248964 +  -8.6  -2.70932   TCAACCTGCGCATCC TGCGCT-GACCCGGGGCCGGCCGGT CAGAA GCCGGCCAGCGCCCGGACGATCGCG TCGTTGAGCAGCCGC  50 18
LCP49_RS10570 2253003 .. 2253040 +  -5.3  -2.79327   CTGTTCATGCGGCGC   CCGGACCCTCGTCCGCG CCGC CGACGACGAAGGACCCG    ATTTGGCTAACATCA  44 181
        rpsT 2253331 .. 2253368 + -29.9  -2.62616   CCCCCCGGCTGTGAC   CGCGGCCCCCGCCCCGA GCGA TCGGTGCGGGGGCCGCG    TCGTGTCCGGGCTGC 100 47
LCP49_RS11670 NONE
LCP49_RS10590 2257106 .. 2257147 + -15.8  -4.21773   CACCGGAAACACGAA TGGCCCCGACCATCCCAT CTCGCA ACGGGAGGGCCGGGGCCA  TTGTTTCTGTTCAAG  91 419
LCP49_RS10635 2263876 .. 2263902 + -14.4   -3.7347   ATCGGTGTGGTTGGA         CGCCGCTCCC AGGGCGA GGGGGCGGCG         TTCTTCCATGTTCGG  81 86
LCP49_RS10680 NONE
LCP49_RS10815 2304444 .. 2304457 +  -3.7  -2.53995   GACACCGCGCGCTGG               CCGGG ACGT CACGG                TCCGTTCACATCCGT  40 87
LCP49_RS10820 2306300 .. 2306314 +  -2.8  -2.57132   GGCGCGTTGCAGAAT               GGCT GCATGAG AGCC               GTTCTGCAACGCGCC  38 64
         dtd 2306963 .. 2307004 + -10.8  -2.71364   AGCAGGGCGACCACG CGGT-CCCAGCCGAAC-GCG ATGC CGCCGTGCGGCGGGGCGCCG TACTTGAAGCCCTCG  57 230
LCP49_RS10835 2310261 .. 2310274 +  -9.5  -2.83233   AGACGAACGGGATGC               CGCGG CGAT CCGCG                TACTTGATCTGCTTG  53 243
LCP49_RS10845 2313206 .. 2313258 + -32.8  -2.87564   GAGCCCCACCCGTCT CGAGCACGCCCCCGCGGCCCGCCTG TCCA CAGGCGG-CCGCGGGGGCGTCCCCG TCTCTGGCAGGCTCC 100 39
LCP49_RS10850 2314314 .. 2314351 + -10.6  -3.14132   GTGCCAGCTTGGCCA  TGACGCCGCCGTCGC-CG TCCA CGAGC-ACGCCGGCGTCG   TTGGTGGCCCGCGCG  58 444
LCP49_RS10895 2325112 .. 2325144 +  -3.9  -2.62184   GCGCCGTCGGGGGCT      GGCGGACGCCGCG GCCTGAG CGCGGTCAGCGCC      TCCTGTCGCCGGGGC  40 7
        msrB NONE
LCP49_RS10910 NONE
LCP49_RS10915 2329166 .. 2329215 +  -6.4  -2.62263   GAGCCCCCGACGCGG CCGGCCGGATCGGTCCGTCGCGTCG CGT CGACGCGGAGG-CT-ACTCG-CCGG TAGTGTGACCCGCAT  44 39
LCP49_RS10920 NONE
LCP49_RS10930 2333102 .. 2333132 + -18.3  -3.29144   CTCGGCCAGGTCCTC      CGCGGTGGCGAGCC AGTC GGC-CGCCGCCGCG       TTCTCCACGACCTGC  82 422
LCP49_RS10955 NONE
LCP49_RS10960 NONE
LCP49_RS10965 2340390 .. 2340406 +  -2.1   -3.7282   CCTGAGAAAAGAGTT              GGGCATG CCA CTTGCCA              TTGTTGCTCCGATCC  55 204
LCP49_RS10970 2341012 .. 2341033 + -10.1  -2.62184   ACCGGTCTTCAGTTG           GCTTGAGGC CCAG GCCTCATGC            TCCTCTGCAGCGGCG  54 20
        istA NONE
        istB 2344387 .. 2344404 +  -5.5  -3.40403   AAACGGGCAAACCAG             CTGGCCA CCAG TGGGCAG              TTCTGATGGCCACCA  53 70
LCP49_RS11010 NONE
LCP49_RS11015 2353268 .. 2353281 +  -3.7  -3.14132   ACACCGCGAACGCGA               GGCCG TAGG CGGCG                TTGGTGACGAAGCCC  45 306
LCP49_RS11040 2356155 .. 2356183 +  -3.7  -3.61398   GTGCCTTCAGCTCCT        CGATGGAGTTCTG GCT CAGCTCTTCCTCG        TTCTTGCGAGGGGCG  55 284
        sepH NONE
LCP49_RS11070 2365244 .. 2365268 +  -5.5  -3.05844   GTGGCCGTGTCCGCG          GACTGACCCCG GTC CGGGGCGAGCC          TGTTCGCCTCGGGCC  48 20
LCP49_RS11075 NONE
LCP49_RS11080 NONE
LCP49_RS11085 2370497 .. 2370515 +  -5.8  -3.90112   GCTTTCGTTCGGGAA             ACGGCGCG GGT CACGCCGC             TTTCGTTCGGGAAAC  63 75
LCP49_RS11095 2373208 .. 2373235 + -24.2  -3.21416   GCCCGGCATGACGAA        GGGCCGGACCCC CGCG GGGGTCCGGCCC         TTCGTCATGCCGCTG 100 44
LCP49_RS11115 NONE
        lpdA NONE
        sucB NONE
LCP49_RS11130 2382647 .. 2382667 +  -2.3  -3.28712   GGCTGACGCCGCACC            ACGCCGCGG GCC CCGGGGAGC            TTCTCCCCGGGGCCC  45 52
        lipB NONE
        lipA NONE
LCP49_RS11150 2387081 .. 2387128 +   -43  -2.62616   GCCGACGCACCCGCG CGAAAGGGGGGCGCCCCGCCGA GGAT TCGGCGGGGCGCCCCCCTTTCG TCGTGTCCGGCCTCG 100 43
        glnA 2389239 .. 2389265 +  -5.7  -3.25823   CTACTCGGTCTGATC        CGCCCGCCG-CG GCCC CGACGACGGCCG         TTCGTCTCCCACGCC  51 28
LCP49_RS11165 2390420 .. 2390456 + -25.1  -2.71011   GCGACACCGGAGCAC    GGCCGGCCCGCCACCCC GTC GAGGTGGCGGGCCGGCG    TCGTTCAGAGCCCGT  93 51
        panB 2395853 .. 2395883 + -29.8  -2.78384   CGCCCCGTGCGACGA       CCGGGCCCCCGTCC GAG GGACGGGGGCCCGG       TGTCGTCCGGCGCCG 100 44
         map NONE
LCP49_RS11195 2397951 .. 2397995 + -19.4  -3.01712   AACTGAGGGCGCAGA C-ACCGAGGGCGGTTCCGG CTTCCCCT CCGGAACCGCCCTCGGCAG TCTTGCCGGGCCGAC  81 35
LCP49_RS11320 2426870 .. 2426880 +  -4.6  -3.02511   GGCCTGGGCGCGGCG                 CCGG ATC TCGG                 TCTTCCGGCCGTCCC  45 96
LCP49_RS11330 2428631 .. 2428661 + -20.5  -2.79796   ATGTTCTGATCCGCC      GGCGGCGGACCGCC CCGA GG-GGTCCGCCGCC       TGTCCTACCCTGGGA  83 32
        pknB 2430902 .. 2430914 +  -3.3  -3.33261   GTCCATCACGTCCTC                GAACC GGC GGGTC                TTGTAGCCGTTGGCC  47 311
LCP49_RS11350 2433685 .. 2433698 +  -3.7   -3.3514   GAGTCGCGCCCGGAC               CCTGC CGCT GCCGG                TTGTAGAGTGTGCGT  49 39
LCP49_RS11355 2436049 .. 2436068 +  -7.1  -3.01791   ATGGGTGAACACGGC            CGC-CGGC ACGGG GCCGAGCG            TGTTGGCGCGGAGGT  50 453
LCP49_RS11400 2446446 .. 2446460 +  -4.2  -3.37796   GTGAAGTCCGCGGCC               CGGTAG TTG TTGCCG               TTGTCCGTGATCACC  51 417
LCP49_RS11450 NONE
LCP49_RS11455 NONE
LCP49_RS11460 2457516 .. 2457530 + -11.4  -3.01712   CAGACAGCGGGGAAG               CCGACG ACG CGTCGG               TATTCGCCGGAGGAG  61 112
LCP49_RS11525 2472449 .. 2472470 +  -4.4  -3.02263   ACCGCGTACTCCTCG           CCGT-CGGC CATCT GCCGCATGG           TCTTGCGCAGGATCT  45 115
LCP49_RS11535 NONE
LCP49_RS11540 2476729 .. 2476745 +  -3.5  -3.46117   AGGCCGACCTCGCCG              CCGCCCC GAA GGGCCTG              TTCTGATGCTGTACT  50 3
        prpB NONE
LCP49_RS11550 2478989 .. 2479032 + -37.6  -2.83164   GCGGTGCCGCGTGCA CGACGACGGCGGGTCGCCCC GGGT GGGGCGGCCCGCCGTCGTCG TGTCGTCATCGGTGC 100 123
LCP49_RS11600 2489033 .. 2489058 -  -5.5  -3.37245   GGACGCGAACACCAA         CCCATCACCTTG AAG CAA-GCAATGGG         ATAAGAGTGTGTGTA  53 34
         rrf 2488710 .. 2488751 - -21.7  -3.93673   GAAACAGTCCAGAAA TGCGGGAAGGGCCTCGCACC AAC AGTGCGAGGCCCT-CCCTCA AAGAATGTCCGGCGG  95 32
LCP49_RS11590 NONE
LCP49_RS11585 NONE
LCP49_RS11580 2485500 .. 2485531 -    -5  -2.82193   AGGATAGCCACGAGA      CCGGACACGCGAACC GGT GGCCC-CGCGCCCGT      GGATGGGCGGTGTCC  44 53
LCP49_RS11575 NONE
        recN NONE
LCP49_RS11565 NONE
        xerD NONE
LCP49_RS11555 2479074 .. 2479094 - -11.1  -2.78935   AGAGTGGTCACGACA            CGCCGCG TGCCGGG CGCGGCG            ACGGCGTGTCGTGAC  55 68
LCP49_RS11530 NONE
LCP49_RS11520 NONE
LCP49_RS11515 2467264 .. 2467294 - -29.8  -3.48924   CGAGCGCGCAGAGAA       CCGGCCCGGTCCCG CGA CGGGACCGGGCCGG       CGTCGTCGGCGCTCA 100 49
LCP49_RS11510 NONE
LCP49_RS11505 NONE
         cmk NONE
         der 2462641 .. 2462674 -  -3.7  -3.16742   GCGAAGGTGGACGAA     CGGTGGGAGCTTGCCG GGA CGACGACGTCCC-CCG     GCGCGGGTGGCCGAG  44 65
LCP49_RS11490 2461888 .. 2461920 - -11.3  -3.68222   CCGGAACGTGAACAA      GGGGCCCACGTCC TCTTCAC AGACGTGAACCCC      TCATCCCTTGACCGA  72 235
LCP49_RS11485 2461592 .. 2461630 - -23.2   -3.6682   TGTCAGGCACGGAAA   GAGGCCCAGGCGCTCCCC TCG AGGGAGTACCTGGGCCTC   ATTCCATTTTCCCTC 100 71
        istA NONE
        istB 2458489 .. 2458506 -  -5.5  -3.40403   TGGTGGCCATCAGAA             CTGCCCA CTGG TGGCCAG              CTGGTTTGCCCGTTT  53 70
LCP49_RS11435 2452266 .. 2452284 -  -6.7  -2.54193   CAGCAGCCGAATGCA             CTCGACG GTCTA CGTCGAA             GTCGTGGTCTGGTCC  46 16
LCP49_RS11430 NONE
LCP49_RS11425 NONE
LCP49_RS11420 2449893 .. 2449906 -  -3.7  -3.76402   ACTGGACCTACGAAA               CGGGG TCAG CCCAG                GGGAGACCTTTGCGT  57 4
LCP49_RS11415 2448459 .. 2448477 - -11.7  -3.27475   CCTCGGAGGAGAACA             CGGCCGA GTGCT TCGGCCG             GAACACTGATGTGCC  64 220
LCP49_RS11405 2446116 .. 2446144 - -10.2  -3.21099   GCCGGGTACGACGAA        GCCGGAGCCCCG AACTG CTGAACTCCGGC        TTCGTCGACGTGGTC  61 44
LCP49_RS11395 2443864 .. 2443891 - -11.3  -2.62184   TCGTCTCGCAGACTA        CCGAGCGGCGCG TGATT CGCGCCACT-GG        CGCGCTCAGAGCACG  57 31
        gcvH 2443375 .. 2443421 - -14.9  -3.32993   GGAGGGAGAGACGAA GGGGACGCCGTCGCCCCGCCG GCCAG CGGCGGGGCGAGGGCGGACGG GGCTCAGCTGGTGTG  76 29
LCP49_RS11385 NONE
LCP49_RS11380 NONE
LCP49_RS11375 2441596 .. 2441628 -  -7.6  -3.33696   GGGGCGGTCAACGAA     GCC--GGCGGCGCGGC CGC GCCGTGTCGCCCCGGC     TCCGCTCAGGCGAAG  55 31
LCP49_RS11370 2440823 .. 2440862 -  -2.6  -2.88959   CGAGACGAAAGATGA  CTGACTCGGC-CCTCCGGG GCG CCCCGCGGTGGAGGGTCAG  GCGGAGCGGCGGGCC  40 22
LCP49_RS11365 2437160 .. 2437197 - -22.7  -2.78463   ATGCCTCCCAGGATA   GGCACGGGCCCGGACGC GGTG GCGTCCGGGCCCGTGGG    GCGGCCCGCCGGCGG  87 57
LCP49_RS11360 2435623 .. 2435677 - -16.9  -3.23274   CCCCGCAGAACTGAA CGCCCCTCGACGACGGCGCCCGGCC CCCGC GGCCGGGCGTCGTCGTCCCCGCGGG TCCGGTCAGAGCAGA  77 31
LCP49_RS11345 NONE
LCP49_RS11340 NONE
LCP49_RS11325 2426520 .. 2426544 -  -4.2  -2.73364   GCGGGAGGGGAAGCA          GACGGTGC TCATCGCCC GCGCCGTC          GAGCTGCTCGCCCCG  42 324
        dinB 2424279 .. 2424291 -  -2.6  -2.78384   TTGCCCTCCAGGATA                GGAC CTGCC GCCC                CACCCTAGCCAGGTG  39 66
LCP49_RS11310 2423747 .. 2423773 - -23.8  -3.59979   CTCGGGCAGCGGAAA         GGCCCCGATCCG GAG CGGATCGGGGCC         TGGAGTGGAGGATAG 100 64
        mraZ 2423064 .. 2423081 -  -4.8  -3.31144   TGGTCACGGTCAGAA             GACGCC GGGCAG GACGTC              CTCGTCGGTCTCGGA  49 2
        rsmH NONE
LCP49_RS11295 NONE
LCP49_RS11290 NONE
LCP49_RS11285 NONE
LCP49_RS11280 NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murG NONE
        murC NONE
LCP49_RS11250 2408602 .. 2408617 -  -4.6  -5.08255   ACGTGCAAAAGAAAA              CGGCGT GTCC ACGCGG               AAAAGACGGCCTCCG  89 162
        ftsZ NONE
LCP49_RS11240 NONE
LCP49_RS11235 NONE
        sepF NONE
LCP49_RS11225 2404536 .. 2404582 -  -7.1  -2.73875   CTGCCGCGAAGACTA CCACCGGGGCC-GA-CAGCCGCC CCG GGCCGCGGGTCAGGCCACGCCGG CCAGGCTCACCACCA  47 12
LCP49_RS11220 NONE
        lspA NONE
LCP49_RS11210 NONE
        dnaE NONE
        nrdR 2397953 .. 2397992 - -26.6  -2.87931   CTGAGGGCGCAGACA  CCGAGGGCGGTTCCGG CTTCCCCT CCGGAACCGCCCTCGG   CAGTCTTGCCGGGCC 100 133
LCP49_RS11185 NONE
        glnA NONE
LCP49_RS11170 NONE
LCP49_RS11155 2387086 .. 2387123 - -35.7  -3.53811   CGCACCCGCGCGAAA   GGGGGGCGCCCCGCCGA GGAT TCGGCGGGGCGCCCCCC    TTTCGTCGTGTCCGG 100 88
LCP49_RS11135 2382460 .. 2382474 -  -4.2  -2.91274   GGGAGCCGAACCACA               TGAAGC TGG GCGTCA               AGTTCCTGATCGGCG  44 288
LCP49_RS11110 2376079 .. 2376097 -  -6.7  -2.70932   CCCGCGGTGGAATCA            GTCC-CCG TCGT CGGTGGAC             GGACGGCCGGGTCCG  47 4
LCP49_RS11105 2374826 .. 2374840 -  -4.2  -3.00022   TGCAGTCCATAGACA               CGTGAC CCT GTCAAG               TCGCGGCCTCGGACG  43 166
LCP49_RS11100 2373208 .. 2373235 - -24.2  -3.21099   GCCCGGCATGACGAA        GGGCCGGACCCC CGCG GGGGTCCGGCCC         TTCGTCATGCCGCTG 100 45
LCP49_RS11090 2370530 .. 2370549 - -16.4  -3.53012   CTTTCGTTCGGGAAA            CGGCGGCG GCTG CGCCGCCG             ACGCCTCGGTGCCCG  81 98
LCP49_RS11065 NONE
LCP49_RS11060 NONE
LCP49_RS11055 NONE
LCP49_RS11045 2355622 .. 2355634 -  -4.7  -2.52464   TGGTGCGCGAACGCA                CCCTC CAG GTGGG                CCGCGCCAGCATCGA  41 307
         dut NONE
LCP49_RS11030 NONE
LCP49_RS11025 NONE
LCP49_RS11020 2352573 .. 2352612 -  -5.6  -3.61398   GGCTCGCGTCAACAA  CCCGCTCAACGACTGGCTC TTC GA-CGAGTCGTGGGGCGTG  GACGTGGCCGTGTCC  58 352
LCP49_RS11005 NONE
LCP49_RS11000 NONE
        acnA 2344837 .. 2344869 -  -5.4  -3.14564   GCACTGGGGGATGAA     GAGCGTCCTGCACCG GCGT CGGCCCCGG-CGCCC      ACGACGACGGCGGCC  46 109
         dxs NONE
LCP49_RS10945 NONE
LCP49_RS10940 NONE
LCP49_RS10935 2332519 .. 2332560 -  -2.3  -3.14344   GACCGCCTTCACCAA CGTGTGCACGCACCAGG-GC TGCCT GCTCCAGGT-CGTGGAC-CG GCAGGAGGGCCCGGC  44 178
LCP49_RS10925 2331079 .. 2331101 -    -7  -2.71144   GATCTGGGCCAAGGA          CGTC-CGCC CGGACC GGCGCGACG           AGGAGGCCGCCGGCG  47 366
LCP49_RS10900 2324992 .. 2325011 -  -6.3  -3.30441   GATGACGCGGGAGAA            CGGCCGC CGGTTC GCGGACG             AGCTGCTCTCGCGGG  52 151
LCP49_RS10890 NONE
        ruvC NONE
        ruvA NONE
        ruvB NONE
        yajC NONE
        secD NONE
        secF 2316294 .. 2316320 -  -7.8  -3.13403   CCCGCCCCAGGAAGA         CCACCGGGGCCG CAG CGGCTCCGTCAG         AGCCGTGCGCCGTCG  53 22
LCP49_RS10855 2313724 .. 2313764 -  -3.9  -3.03124   CCGGACGGTCGAAGA CCTGCTGCTCAGCGCCG ACCCGGATG CGGCGCGGCGC-GC-GG CCGCCGTGATCGGCG  45 168
        hisS 2310049 .. 2310075 -  -7.3  -2.52464   GGGCCGGTGAACCGA        CGCGCGGACG GGTGTCGG CGT-CGCGCG         CCGGGGCCGGCGCAG  46 53
        aspS 2306596 .. 2306626 -  -9.7  -2.75481   GGCGAAGGGCAACCA      GGCCGAG--CCGCTC TAC GAGCGGTTCACGGCC      GAGCTCGAGGCCGCC  52 181
LCP49_RS10810 2302275 .. 2302286 -  -7.2  -3.29511   CTCATCCCTGGACAA                CCGG TGAT CCGG                 GCGTCTTTATTCCGC  53 81
LCP49_RS10805 2301444 .. 2301471 -  -6.9  -2.79183   GCGATCCTGAGGAGA        GCTGAGGGGCG TGCCGC CGCCCGTCATC         CACTGATGCGCTGCG  48 160
        rpsD NONE
LCP49_RS10795 NONE
        alaS NONE
        ruvX NONE
        mltG NONE
LCP49_RS10775 2294623 .. 2294659 -  -6.6  -2.70932   CCCCGCTGTCAACCA   GCGCACCATGGCGTGCAG TCT CT-CACGC-ACGGGGCAC   CGCGCCGCCGCGTGT  47 77
        aroC NONE
LCP49_RS10765 NONE
        aroB NONE
         efp NONE
        nusB 2290375 .. 2290393 -  -2.2  -2.71924   GACGCGGTGCGAAAC             GGGCCTCG TGA CGGAGCTC             TCGGCGGCTCAGGCG  39 34
        pyrR 2289611 .. 2289629 -  -4.4  -2.62184   CGGCGGTGGACAGCA             GGTGGCGC ACG GCTCAACC             CTCCCGGGTCGCGAC  42 20
LCP49_RS10740 NONE
LCP49_RS10735 NONE
LCP49_RS10730 NONE
        carA NONE
        carB NONE
        pyrF 2281211 .. 2281226 -  -4.6  -3.66378   CACAGCCGATCGAAA              GGGAAG ATAC CATCCC               GTCCACACGGCACGG  56 63
LCP49_RS10710 NONE
         gmk 2279729 .. 2279749 -  -8.9  -3.35679   GCCCGGCAGGGAGAA            GTCGCCGAA GTC CTCGGCGGC            CAGGTCGGCCTCCGG  58 365
       coaBC NONE
        metK 2276984 .. 2277031 -  -3.3  -3.04144   CCGGGAGGGCGAACA GCGCGTCCGTGATGCCCGCCCCCG GGT CAGAGGCCGGCGGCA-G--CGCGC AGCTGCTCGACGCGG  43 4
LCP49_RS10685 2274626 .. 2274647 -  -5.7  -2.62184   GGTGCCGGCACAGGA           GGCGCTCGC CGCG GCGATCGAC            GACGCGGGCGGCACG  43 212
LCP49_RS10675 NONE
        leuS NONE
LCP49_RS10665 2268369 .. 2268380 -  -3.6  -3.14132   GGCGGTGTGCAGGAA                CGGA CGCG CCCG                 TCTCCTCGGCTCGCC  44 54
LCP49_RS10660 NONE
LCP49_RS10655 NONE
LCP49_RS10650 2264876 .. 2264895 -    -2  -3.73775   GCGACGCGGAGCAAA            TGGCCCGT GCCG ACGGGGTA             TGTCCCTCTCGCGCC  55 252
LCP49_RS10645 NONE
LCP49_RS10640 2263668 .. 2263687 -  -4.8  -3.47078   GACGGCACAGCACAA            CCTCGGCC CGGT GGCCGCGC             GCCACGGCACGGTCC  52 261
LCP49_RS10630 NONE
LCP49_RS10625 2261869 .. 2261904 -  -3.3  -2.83522   AGGGTTCTAGGAAAC    TTTCTATAGCTCCCC TCGCGT GGGGAGGTTTACAAA     TACCCTTCACCACCC  42 50
LCP49_RS10620 NONE
LCP49_RS10615 NONE
LCP49_RS10610 NONE
LCP49_RS10605 2259975 .. 2260014 - -22.9  -2.70932   TTGCTCCTTGAAGTA  GCGGCGACGGCCCACGC TGGTGT GCGTGAGCCGTCGCCGT   CATGCGTGGTGTGCG  87 44
LCP49_RS10595 2257106 .. 2257147 - -20.9  -3.46285   CACCGGAAACACGAA TGGCCCCGACCATCCCATC TCGC AACGGGAGGGCCGGGGCCA  TTGTTTCTGTTCAAG  91 173
LCP49_RS10585 NONE
LCP49_RS10580 2253153 .. 2253174 - -12.3  -3.28712   CCGCGCCGTGGACAA           GGCCGTCGCC GCC GGCGA-GGCC           GAGGCCGCCGCCGCC  65 263
        lepA NONE
        hemW 2248506 .. 2248554 -  -9.9  -3.01791   AGCCCCTCGTGAACA CCCGCGCGCAGCCCGACGCCGGC CGC ACCGGCCACGGCCCGCCCGCCTG GCTCGTCTCGGCCGG  57 405
        hrcA NONE
        dnaJ NONE
LCP49_RS10535 NONE
LCP49_RS10530 NONE
        ybeY NONE
LCP49_RS10520 NONE
         era 2240476 .. 2240486 -  -8.2  -3.28712   GCCTCGGGCTCAGAA                 GCCG AGT CGGC                 CGAGCTGTTTGGGGT  56 9
        leuA NONE
        recO NONE
LCP49_RS10500 NONE
LCP49_RS10490 2234430 .. 2234471 - -24.6  -2.85351   CCGCCTGACACGACA CCGCGCCACGGCCCGGACCC CGGT GGGTCCGGGCCGT--CGCGG CCCCGGCGAGCAGAC  93 43
LCP49_RS10480 2232192 .. 2232202 -  -3.2  -2.87132   TCCTCTGCGGACAGA                 GCCA TCG TGAC                 CTCCTCAGATCATGG  42 138
        erpA 2231655 .. 2231673 -  -6.6  -3.66654   CAGTCTAAGCCGAAA             CGCGCGGA TTC TCCGCACC             GTGACACGTGCCGAT  60 156
        coxB NONE
        ctaD NONE
LCP49_RS10460 2228445 .. 2228483 - -28.2  -3.71378   CAGCGCACAGGGAAA   CGCCGCAGGCCGGACCCC GAG GGGATCCGGCCTGCGGTG   GTGGAACGACGGACG 100 43
        istA NONE
        istB 2225054 .. 2225093 -    -4  -3.64822   ACCCCGGCAGGGAAA  GACCGGCGCCAGACGCCTC AGC GGGTCGCC-GCCGCAGGCC  TGTCAAGGGCCATTG  54 153
        trpD 2218514 .. 2218527 -  -4.5  -3.98172   ATCAAGACCGACAAA               TCCAG CATC CCGGA                GACCGCCGAGACCCT  63 312
LCP49_RS10410 NONE
LCP49_RS10405 2216330 .. 2216343 -  -3.1  -3.30124   CGTGACCGCCGAGAA               GGT-CG GCT CGTACC               GGCTCGACGATCCCG  47 476
LCP49_RS10390 NONE
LCP49_RS10385 NONE
LCP49_RS10380 2211704 .. 2211740 - -30.3  -2.71483   ACAGCCCCCGAACGA    CGACGGGGCCGGATCCA TGG CGGATCCGGCCCCGTCG    TGCATGGGGGAGCGG 100 45
LCP49_RS10325 NONE
LCP49_RS10320 NONE
LCP49_RS10290 2191158 .. 2191175 -  -2.7  -3.22475   TGGACGGCGAGAAGA             TGTCCAAG TCC CTCGG-CA             ACCTCGAACTCGTCT  46 404
LCP49_RS10270 2188396 .. 2188408 -  -6.9  -3.09834   GACGTGACCATCGAA                CCCGA GCA CCGGG                ACGTCGCCCTGGAGA  51 361
LCP49_RS10260 2187119 .. 2187153 - -27.2  -3.03124   CCGGACGGGGGAACA     CGCAGGGCCCCGGTCG TGA CGACCGGGGCCCTGCT     GCTCGACGAGTGGTG 100 36
        malQ 2183279 .. 2183292 -  -9.5  -3.14211   ACTGTTCGGCATGAA               GGGCG CGAT CGCCC                ACGGGATGTTCCTGG  56 305
LCP49_RS10235 NONE
LCP49_RS10230 2176805 .. 2176819 -  -3.5  -2.62184   TCTCGTGGGAGACCA               TCGCG GAGCG CACGA               TCGAGGTCTACGAGG  40 131
        glgC 2174240 .. 2174297 -  -3.2  -2.87564   CGACGCGCGGACACA CCGGGGCGTGCCCGCGCGTCGGCGGT GGTCCGGG ACCGGCGGCCCG-GGGC-CGCGTCAG TGCGGCGTCGGGACG  42 22
        pepN 2171481 .. 2171507 - -19.4  -2.79831   GGAATGGTCACGACA         CGCCGCCTCGCC CGA GGGGAGGCGGCG         TGTCGTGACCACTCT  79 60
        serB 2165367 .. 2165397 -   -27  -2.64243   CCACACCCCAGACGA       CGAGGGCCGGATCC GTG GGATCCGGCCCTCG       TGACCTCCGGGAGCG 100 47
LCP49_RS10165 NONE
LCP49_RS10160 NONE
LCP49_RS10155 2161686 .. 2161738 - -11.2   -3.7282   CGAGCCCACGAACAA CCTCGACCCCGC-CAGCCGCGAGGAG ATC CTCCACGCG-CTGCGCCAGTACGAGG GCGCCGTGGTGCTCG  71 187
LCP49_RS10145 2158786 .. 2158813 -  -9.9  -2.80988   GGAGACCACGAACCA        GGCGCCCACGGA GGACA TCCGTGAG-GCC        CTCAAGGACGTGATC  56 413
LCP49_RS10115 NONE
LCP49_RS10110 NONE
LCP49_RS10105 2151485 .. 2151519 - -20.1  -2.64616   CCGGGACGCAGACGA    CG-ACGGCCCCGCACC TGCC GGTGCGGGACCGTTCG     CGTGCGCGGGGCGTC  81 39
         tkt NONE
         tal NONE
LCP49_RS10085 NONE
         zwf NONE
LCP49_RS10075 2142432 .. 2142449 -  -2.5  -3.28924   CATCCTGCTGCACAA             GGGCCGC GGCG GCGGCGT              CTCGGACATGTTCGG  46 273
LCP49_RS10015 2128767 .. 2128814 - -14.9  -3.28924   CATGGCGGGGCAGAA GCCGGCCTGACGCTGGGCCCGGG ACCG CCCGGGCGCACCGTCA--CCAGC CGCGCTCGGCCCACT  73 18
LCP49_RS10005 2125124 .. 2125147 -  -6.6  -3.06796   CTCGAGGGGAGCGAA          GCCGC-GCGGG TCG CCCGCCACGGG          CCGTCCTGCCGCCCG  50 55
LCP49_RS10000 2123214 .. 2123234 -  -7.6  -3.84406   CCTGCACGAGAACAA           CCTGCCGTT CATC AACGGC-GG            CGAGAACGTGCCCGT  65 469
LCP49_RS09960 NONE
LCP49_RS09955 2112080 .. 2112098 -  -8.1  -3.31144   CTGGGAGGCCCACAA             GGAGCAG GTGCG CCGCTCC             CTCCAGGAGGAGGCC  55 308
LCP49_RS09935 2105805 .. 2105820 -  -8.2  -2.78463   AGCTCGCCGAGGATA              CCCCCG GCCG CGAGGG               TGGCCGAGCGGCCCC  49 94
LCP49_RS09895 2098693 .. 2098705 -  -9.1  -3.14132   CGTGGGCTCCACGAA                CACGC TGC GCGTG                CACCGCGTGGGCGAC  56 140
LCP49_RS09820 NONE
LCP49_RS09815 2078117 .. 2078146 - -23.6  -2.62184   TCTTTGTCCACACCA       CCGCGGGGGCCG TTTCAG CGGCCCCCGCGG        TGGTGTTGCCGAGGT  89 47
LCP49_RS09805 NONE
        merA 2074103 .. 2074128 -  -3.2  -3.53811   GTGACGCGGCCCAAA        CGGACCGCGGCC TCAT GGCGGCG--CCG         CAAGGCGGTCATCGC  50 260
LCP49_RS09770 2071108 .. 2071122 -  -3.5  -3.44051   GGGCCACTATGAGAA              GCG-CG AACC CGTCGC               CTCCGCCTACGCCGA  49 344
LCP49_RS09710 NONE
LCP49_RS09705 NONE
LCP49_RS09700 NONE
LCP49_RS09695 2060438 .. 2060460 - -20.6  -3.21099   GCCGGCCACGACGAA           GGCCCCTCCC GAG GGGAGGGGCC           TTCAGATCGGAGCGG  89 35
LCP49_RS09685 NONE
LCP49_RS09680 NONE
LCP49_RS09675 NONE
LCP49_RS09645 2048175 .. 2048187 -  -3.3  -2.72511   GGCAGCTCTCGAAAT                CCGGA TTG CCCAG                CTGCCCTGAGAAGCA  41 307
LCP49_RS09640 2047455 .. 2047476 -  -5.7  -2.87931   GCCAGGTCTGACACA           CCCGGCCGA CGAG TGGGCCGCG            GGGCGGTGGACGGGA  46 68
LCP49_RS09620 NONE
LCP49_RS09615 NONE
LCP49_RS09610 2042681 .. 2042695 -  -8.5  -2.82516   TGCGGGAGGAGTACA               CGGCG TGGGC CGCCG               CCGCCGGGCTCGAGG  51 119
LCP49_RS09560 2032743 .. 2032785 -  -6.8  -3.31792   CTACGACTGGGAGAA CGGGCGGATCCCGGGG TTCGTGACCTT CCCCGTGGCCGGCCCG TTCGACGACGCTCCG  53 242
        gabT 2025756 .. 2025774 -  -6.6  -3.28712   GGCCGGTCTCGAGAA             GGAGCAGC TGC GCCGCTTC             GAGAAGGGGCTGGCC  52 302
LCP49_RS09520 2023826 .. 2023837 -  -7.2  -3.09492   TGGCCAACGTCAACA                CGCC GGCG GGCG                 AGGGGGCGGAGATCC  51 220
LCP49_RS09495 2017482 .. 2017528 - -15.2  -2.87132   CCCGCCGCGCACAGA TCCGTCGACGCGCCGCCCCTCT CGCAC AGAGGGGCGGCGCGTC--CGTG TCGGCCTGACACGCG  68 57
LCP49_RS09480 2015552 .. 2015576 -  -8.5  -3.36327   GCATGGCATGCAGAA          GGTCAGGGGTT CGA ATCCCCTTACC          TCCACCAGTCAGAAG  58 34
LCP49_RS09470 2014129 .. 2014152 - -19.6  -3.37796   CTCCACGAGTCAGAA          GGCCCGGTCC ATAC GGACCGGGCC           TTCGTCGTCGTCGGG  90 81
LCP49_RS09410 2002143 .. 2002197 -  -8.2  -3.01712   CGCTGGCCGGCAAGA CCGACCCCACCGTGGCCGCCCCGG GCACCAT CCGCGGCGACCTGGGCCGGGACTG GGGCGAGGCCGTCCA  52 197
        valS 1981216 .. 1981233 -  -6.3  -3.64236   ACCCAAACGGGCAAA             CCAGCTGG CCA CCAG-TGG             GCAGTTCTGATGGCC  58 472
LCP49_RS09310 1978268 .. 1978304 - -28.9  -2.78384   CCGGCTCGCACGAGA    CCGGCCCCACACCTTCA GCG CGAAGGTGTGGGGCCGG    CGTCGTCGGGGTGCG 100 53
LCP49_RS09270 1971857 .. 1971902 - -24.9  -3.89822   GACGCACCCGAGAAA GCCATGAGCCGGGCCATCGTG TGCA CACGATGACCCGGCTCATGAG GTCCGGAGGGGATGA 100 28
LCP49_RS09245 NONE
        pepN 1963653 .. 1963665 -  -4.8  -3.14564   CGAGTTCGCGATGAA                GCAC AGCCG GTGC                GCCTCGGCGTGGAGG  46 508
LCP49_RS09230 1962756 .. 1962767 -  -2.2  -3.01712   CGCTGGTCCGCAAGA                TCCG GGCG CAGA                 TGTGGGGACCCCTGC  42 242
LCP49_RS09220 1960883 .. 1960915 -  -7.6  -3.66018   CTACGAGGCCAACAA     GGTCGATCGG-CTCG GCCC CGAGGCCGCCCGCCC      GCACCGGATGACGCA  61 249
LCP49_RS09205 NONE
LCP49_RS09200 1956572 .. 1956590 -    -3  -2.90075   CGGTGGTCAAGGACA             TCCTGGAC CCC GTCCGCGA             CCCGGTGCGCCGCAC  42 222
         orn 1951225 .. 1951245 -  -7.5  -2.68434   GTCCACAGTACACGA            GATCCCGCG CAG CGCCGAATC            GGGGCGGCGAGGCCG  47 52
LCP49_RS09175 1951057 .. 1951086 - -20.9   -3.6075   ACCAAGACGAGATAA       GGCCCGGAATCAT CCGC ATGATTCCGGGCC        TTACGGTGGGGTGAG  93 32
LCP49_RS09170 1949725 .. 1949776 - -33.3  -3.17194   AGGCCGCGAAGGGAA GCGCAA-GAGAGGCCCCGTCCAGC AGCCA GCTGGACGGGGCCTCTCGCTGCGC CAGGGGTCAGGCGCC 100 32
LCP49_RS09150 1947364 .. 1947377 -  -3.7  -3.34947   CAAGAATCTCCAGAA               GGCCG GGAT CGCCC                AGGGCTACACCAAAG  49 62
LCP49_RS09135 1944564 .. 1944612 -   -10  -2.78547   TGACGGCATCAACGA CGCCCCGGCCCTGGCGACGGCG GACAT CGGCGTGGCCATGGGCGCGGCC GGCTCCGGCGTGGCC  54 283
LCP49_RS09120 1941824 .. 1941838 -  -4.2  -2.62184   CCGCCGGGGACACCA               CGACGA CGG CCGTCA               TTCCGCGGCGAGGGC  40 23
         def 1940936 .. 1940951 -  -7.6  -3.40403   CGTCTGGTACGACAA              CGAGTA CGGC TACTCG               CACCAGGTGATCCGC  56 174
        rnpB NONE
LCP49_RS09095 1937580 .. 1937597 -  -4.8  -2.75064   CCCGGGACTGAACCA             CCTGGCC TTCCG GGCC-GG             ATCACGCTCCCGCGT  42 223
        msrA NONE
        cysK 1933258 .. 1933268 -  -2.4  -3.21924   TGATGCGGGAGAACA                 GTCC CAC GGGC                 GGCCCCTTCGGGTCG  45 65
        cysE NONE
LCP49_RS09040 NONE
        aceE NONE
LCP49_RS09005 NONE
LCP49_RS09000 NONE
LCP49_RS08995 1919948 .. 1919984 -  -9.4  -3.12668   TACGTGGACAGTGAA   TCAGACGGCGCCGCCTC AGGG GAGGCGG-ACCACCTGG    GCGCCGTAGACCAGC  56 4
LCP49_RS08990 NONE
        fabF 1917935 .. 1917952 -  -6.9  -2.62184   TGCGCTTCGAGATCA             CGGAGGA GCCG TCCGCCG              GGGTCGACGGCTCGC  46 308
LCP49_RS08890 1899276 .. 1899286 -  -6.8  -4.10161   GACCATGGGGGAAAA                 GGTG TCC CACC                 GAGCTCTCTTCGGTG  69 503
LCP49_RS08875 NONE
LCP49_RS08870 1894592 .. 1894618 -  -7.2  -2.63596   CGGCAGCCCACACGA         CCGCCGGAAG GGTGAGG CCCCCGACGG         CGCCGCGTGCCCAGC  46 161
LCP49_RS08865 NONE
LCP49_RS11665 1890030 .. 1890080 -  -5.4  -3.21276   GCTTCCCCTACAAGA CCATGTCCTTG-ATC-GAGCGCGG CTACC CCGTGCTCTGCTTCGCGGACATGG GGATCGCGGACTTCC  50 252
LCP49_RS08815 1879227 .. 1879240 -  -2.3  -4.09864   ACCGATGCCTGAAAA               GCCGT TGTC ACGCC                GGGTCGTCAGCGCCG  63 19
LCP49_RS08760 1868066 .. 1868083 -  -3.3  -3.53012   TTTTCGTTCGGGAAA             CGGCGGCG TGT CGGC-CCG             TTCTCACGGGGGAGA  50 184
LCP49_RS08735 1862210 .. 1862240 -    -4  -2.73364   CTTCGAGTCGAAGTA      CCAGGACA-CCGG CACCAC CCAGCTGTCCTGC       CCGGCCGAGCTGCCG  42 310
LCP49_RS08700 1854968 .. 1855024 -  -4.9  -3.63569   TGAACGCGGGAAGAA CGGGGTGTCTCCGCGGCGCGTCCCGTCG GTGG CG-CGGG-CGGGCCTCAG-GCCTCGCCG GCGCGGATGAGCTCG  56 13
LCP49_RS08695 1853094 .. 1853128 -  -6.3  -2.70932   CGGCCTGGGCAAGGA    CGCGCACCGCATGGCGG CCG CCACCG-GCGGGGC-CG    ACTCCGCGCCGGCAC  46 319
LCP49_RS08600 NONE
LCP49_RS08590 1832851 .. 1832861 -  -2.4  -2.73364   TTCCGAGCCTAACCA                 CGCG GGC CGGG                 ATCGGGATAGCGGAT  39 8
LCP49_RS08585 NONE
LCP49_RS08580 NONE
LCP49_RS08575 1830323 .. 1830353 - -15.5  -3.16881   GACCGAGTTGATGAA      CGCGGCCTGCC-AGC ACC GCTCGGC-GGCCGCG      CGCCATCCCAATTCG  71 266
LCP49_RS08515 1816727 .. 1816737 -  -6.8  -3.63895   TGCAACGAGGTGAAA                 CCCT ACC AGGG                 GTTTCAGACGCCGTG  60 29
LCP49_RS08510 NONE
         bcp NONE
LCP49_RS08500 NONE
LCP49_RS08495 NONE
LCP49_RS08490 NONE
LCP49_RS08485 1808974 .. 1809005 -  -7.9  -2.79302   ACTACGTGGACGAGA      CGCGCCACCCG GCCACGCTCT CGGGCGGCGAG       ACCTTCATGGCCTCC  49 354
LCP49_RS08470 1803531 .. 1803548 - -10.5  -3.05343   GTCAGAGTGCCAAGA             CGCGCGC GGCC GCGCACG              GCGCGCAGACCGCGA  57 279
LCP49_RS08430 NONE
LCP49_RS08425 NONE
LCP49_RS08420 1795496 .. 1795518 - -10.5  -3.14132   GCTGCGCGCCATGAA           GCCCGGCCC GCACG AGGCCGAGC           GGCTCGGCGATCTCG  58 94
LCP49_RS08385 1786288 .. 1786332 -  -6.3  -2.86164   CGGTGAAGGACTACA CGTGC-CCCGGCTGCGGCCGG GTGAT CCGGCAGG-GCCAGGCGCACC TCGTGGCCTGGCGCG  47 161
        nucS NONE
        thiE 1759540 .. 1759559 -  -7.2  -2.63596   GTCGACTCTACACCA            TCA-GGACG GCC CGTCCGTGA            CCTCCCCGCGGGGCG  46 43
LCP49_RS08245 1759372 .. 1759407 - -24.8  -3.45054   CCGCAGAACCCAGAA    GAGCCGGACCACCGTG TCGC CACGGGGGTCCGGCTC     TGTTCGCTCGTGCCC 100 34
LCP49_RS08235 NONE
        thiC 1754989 .. 1755028 -  -2.1  -3.05384   GTGGGTGTGAGTCAA  GAGGCATCACCACTCGAT CGACC ACCGAGC-GCACTGCCCC  GTCCGTGGGGCCGCG  43 171
LCP49_RS08225 NONE
LCP49_RS08220 NONE
LCP49_RS08215 NONE
LCP49_RS08210 NONE
LCP49_RS08205 NONE
        hrpA 1743135 .. 1743160 -  -3.9  -3.28712   GGCCCGCGTGGACAA         CGCCCCCGATCC GGC GGACCTGG-ACG         ACGCCGCCGCCCGCC  48 118
LCP49_RS08175 1740943 .. 1740998 -  -2.3  -3.30124   GCTCACGGTCGAGAA CCTGGA-CATCGCGTACGGCCGGGGC GCCCT GCACGGGCCCTCCACGGCGGTCGAGG ACGCGGCGGACTTCC  46 97
LCP49_RS08140 NONE
LCP49_RS08135 1729390 .. 1729414 - -22.9  -3.23216   CCCGACGATGACGAA          GGGCCGTCCCC TGA GGGGACGGCCC          TTCGTGGTCTCTGCG  95 204
        aroA NONE
        rsgA NONE
        hisN 1724643 .. 1724688 - -11.8  -2.63596   CCGCACCGCACAGCA CGCCCGCGGCACCGCCGAGGGC CACC GCACCCG-CAGTGCCG-GGCCG GCGATCTGTCCCGCG  57 82
LCP49_RS08105 NONE
LCP49_RS08100 1723264 .. 1723274 -  -6.8  -3.35798   AGTGGTGATTGACAA                 CCTC ATA GAGG                 AGTCGCCCCCCTGGG  55 490
LCP49_RS08020 1708137 .. 1708150 -  -2.3  -3.61517   ATCGGGGGCGAAGAA               GAGAG GTGG CTCGC                GTCTGTCGCCACGGG  52 477
LCP49_RS08015 NONE
LCP49_RS08000 NONE
LCP49_RS07995 NONE
LCP49_RS07990 1702569 .. 1702625 -  -5.5  -3.12351   GTCGCGCAGACCGAA CAGGGCGGCTTCGCCTCCGTCACCGTC ACG GCCTATGACGCGGACGGCACCGTCCTG GGCCAGGACGGCCTG  48 281
        lexA NONE
LCP49_RS07930 NONE
LCP49_RS07925 1689414 .. 1689431 -    -4  -3.53012   CTGTCGTTCGGGAAA             CGGCGC CTCAGC GCGCCC              GCGCCACCCGCAGGA  50 15
LCP49_RS07855 NONE
LCP49_RS07825 1666057 .. 1666082 -  -5.3  -2.70932   CGCGGTGTGGAACCA         GCTCGACACGGC GGT GCCGTGG-GTGC         ACCGTCTCACCCGGA  44 323
LCP49_RS07705 NONE
LCP49_RS07700 1639117 .. 1639139 -  -6.9  -2.75481   GCCGAACGTCAAGGA           CGCCCAGGC GATGA GCCTGAGGG           AGCTGGCCGACGCCA  47 469
LCP49_RS07650 1629178 .. 1629190 -  -4.8   -3.4252   GTTCATGGACTACAA                GGAC GTCGA GTCC                CTCGTGGCGGCCGCG  51 504
LCP49_RS07640 1627286 .. 1627324 - -26.8  -4.52857   ACGCCCTACAGAAAA  CGGCCCCCGG-CCGCGC GGTATG GCGCGGGCCGGGGGCCG   TCGTCGTGCCGGTGC 100 41
LCP49_RS07595 NONE
LCP49_RS07590 1617702 .. 1617715 -  -5.2  -3.61398   TCTCTGCGCGAACAA               GGCC GTCGCA GGCC                GCGGCGGTGCAGCCG  56 311
LCP49_RS07570 NONE
LCP49_RS07565 NONE
LCP49_RS07560 NONE
LCP49_RS07555 1608304 .. 1608325 -  -5.7   -2.8547   AGGGTTCATATCAGA           GTTAGCGCC AAGA GGCGCGATC            AGGAGGTCGCGGGTT  46 24
LCP49_RS07550 NONE
LCP49_RS07545 1605969 .. 1605990 -  -4.4   -3.4072   CACCCGCTACGACAA           GCTCGCGAT CGTCT ACCGCG-GC           GCCGCCGTCCTACGC  51 454
LCP49_RS07520 1601578 .. 1601590 -  -2.6  -3.76402   ACTGGACCTACGAAA                CGGG GTCAG CCCA                CTGGGCCATCTGGCG  55 446
LCP49_RS07510 1599864 .. 1599901 - -23.5  -3.30124   CCTCACGTCGCACAA   CGGCGCCCGCACCCT CGCGCGGT AGGGCGCGGGCGCCG    TCGTGGAGGTGAAAG 100 481
LCP49_RS07500 1597490 .. 1597500 -  -8.2  -2.87211   AGCTGGTGTCAGACA                 CGCC CTG GGCG                 CGCCCGGCGCCGTAG  51 156
        istA NONE
        istB 1594545 .. 1594562 -  -5.5  -3.40403   TGGTGGCCATCAGAA             CTGCCCA CTGG TGGCCAG              CTGGTTTGCCCGTTT  53 70
LCP49_RS07470 1592947 .. 1592959 -  -6.9  -3.53012   GTTTCGTTCGGGAAA                CGGCG GTC CGCCA                GCCGCGCGGCGTCAG  57 37
LCP49_RS07450 1588135 .. 1588169 -  -3.3  -3.04248   GAATACCGCCGAATA     TCGCCCCCGGACCAC GGTGT GGGGTCAGGCGACGT     CGGGCGCCGTCGTCG  43 15
LCP49_RS07445 NONE
LCP49_RS07440 1585835 .. 1585872 -  -3.1  -3.13403   CGGTGCGCAGGAACA   GGTAGCCGATGGGGACG AGCG CGACCGCCGCGGCCACG    AGGGCCGCGGCGGTC  44 102
LCP49_RS07435 NONE
LCP49_RS07430 1583105 .. 1583117 -  -9.1  -2.79183   TCGAGTGGCATCACA                CCCTG GTG CAGGG                CGCGGAGTTCCGGCG  52 72
LCP49_RS07410 1579467 .. 1579480 -  -2.3  -3.09635   AGTTCGACCATGCAA               CCAAG CTTA CGTGG                ACGAGTGTTGCAACC  43 51
LCP49_RS07405 1577835 .. 1577846 -  -2.2  -3.33261   GGGGAACGTCGATAA                CGAC AGAC ATCG                 GAAGTCCTCAGACAT  47 205
LCP49_RS07400 1577164 .. 1577174 -  -4.6  -3.03243   AGCGAGGGCGGAACA                 GGCC GCT GACC                 AGGCATGTTGTTGCA  45 235
LCP49_RS07395 1575602 .. 1575621 -  -3.4  -3.02144   CGACCCCCTGGAAGA            GCGCATCG CGTT CGGTGCTC             ATGCGGCACCTCCGA  43 24
LCP49_RS07390 NONE
LCP49_RS07385 NONE
LCP49_RS07380 1572778 .. 1572795 -  -3.3  -3.01791   ACGTGCTCGGCAAGA             CGGTCGCC GAG GTCG-CCG             ACGCCTGGGCCCCCT  43 490
LCP49_RS07370 NONE
LCP49_RS07365 NONE
LCP49_RS07360 1568492 .. 1568543 - -12.8  -3.14344   CATGGCGGCCACGAA GATCGGCGACCCCGAGCCGCCGGCC GCG GGCGTGCTGCTGGGGGCGGCCG-TC GGCTCGCTCCTCGTG  66 324
LCP49_RS07340 1565193 .. 1565244 -  -6.4  -2.78547   TCACGCGATCAACGA GCAGGAGCTGGGCCACGTGAAGGAG TAC CTCGCCCACATGGTGCCGCCCC-GC GGCTGACGCACCGGA  45 84
LCP49_RS07330 1563558 .. 1563580 - -12.6  -3.53012   CTGTCGTTCGGGAAA           CGGCCACCGG TCC CCGCCGGCCG           GGCTCAGGGCTCGAC  71 29
LCP49_RS07315 NONE
LCP49_RS07305 1557353 .. 1557392 - -12.1  -2.78384   GCGTGCTGGACGAGA TCGGCGCGACCGTGGAGGC CGGT GCCTCCGCGG-CG-GCCGC  CCGCAAGTGGTGGAT  59 450
LCP49_RS07240 NONE
LCP49_RS07235 NONE
LCP49_RS07230 NONE
LCP49_RS07225 1540848 .. 1540863 -  -7.5  -3.53012   CCCGGTGGGGCGAAA              GGCGC GGGACG GCGCC               GACTCTGACCAGCAC  57 92
LCP49_RS07220 1538869 .. 1538905 - -13.6  -2.72661   CACCATGTGGAACCA    GCCCACAACGCCGGCG CTCCC CGCCGTCGTCGCCGGC    GGCTCACTCCGCGTC  64 29
LCP49_RS07215 1537193 .. 1537236 - -26.4  -2.91582   CATCTGACCCAGAGA CGACTTTCGGTCGTGAGATAG GCC CTATCTCACGACCGAAAG-CG TCCATTCCCCCGATG 100 90
LCP49_RS07205 NONE
LCP49_RS07200 NONE
        deoC NONE
LCP49_RS07190 1531937 .. 1531981 - -31.6  -3.51924   CCGCGATGGAGACAA GCCGAAGGGCGTCCACCCCC GTGTT GCGGGTGGACGCCCTTCGGC GCGCGGCGGCCGGAC 100 75
LCP49_RS07185 NONE
LCP49_RS07180 1529485 .. 1529505 -  -2.3  -3.01712   GGCTGCGCTCGAACA            TCCAGGCCG AGA CGGCCGTGC            GCGTCGCGGAGACGC  42 470
LCP49_RS07170 1526939 .. 1526954 -  -5.4  -3.28712   GGCCGCGGTGGACAA              GGCC-TG CTT CACGGCC              ACCCCGCCGTCGGCT  49 158
LCP49_RS07160 NONE
LCP49_RS07155 1524564 .. 1524589 -  -6.8  -2.74012   GGAGGAGCTCAAGGA         CCGG-TACGGC CCGCT GCCGGAGCCGG         TGGAGGCGCTCGTCG  47 325
LCP49_RS07140 1519393 .. 1519430 - -13.3  -3.05384   CGTCCGGCGAGGGAA   GGGCCCGGCGCC-CCCGC CGG GCAGGCGGAGCCGAGCTC   GACAGCGCCGGGCGA  65 54
LCP49_RS07135 1518711 .. 1518727 -  -7.9  -3.29144   GGACGCCGTGGAGAA              GCTCGTC ACG GACGGGC              TCGAGCCCGCCCAGC  55 98
LCP49_RS07115 1514431 .. 1514472 - -17.9  -2.87132   GCCGGCTCGCACAGA CGTAGTGGGGCCCCGCACC GGAA GGTGCGGGGCCCCAGCGTG  TGGAGGGGACTGGCG  76 41
LCP49_RS07095 1509873 .. 1509885 -  -4.7  -2.82933   CGGGAACCCAGGACA                CGGGG TCG CCGCG                GCGGATCGCTTTCAG  44 227
LCP49_RS07090 1509048 .. 1509064 -  -4.4  -3.33815   ACCGGCTTGAATGAA              CCATGC GCCCA GCATAG              CCAAGGGCGGTTCCC  51 64
LCP49_RS07085 NONE
LCP49_RS07070 NONE
        rfbA NONE
LCP49_RS07060 1502356 .. 1502372 -    -3  -3.13899   AAGCGGCGACGAATA             GGC-GAA TCGG TTCAGCC              TTGCTGAGGGGACGA  43 20
LCP49_RS07005 NONE
LCP49_RS06925 NONE
LCP49_RS06920 NONE
LCP49_RS06915 1467925 .. 1467962 -  -2.5  -2.62184   CTGGGCCCGAGAGGA   CGACGCCGTGGTGCG CTGACCGC CGCCGGACGGCACCG    GGAACGGGCCGGGAG  38 84
LCP49_RS06895 1463952 .. 1463972 -  -4.6  -2.57132   TTCTTCCCGGAGAAG           GGCGGCTCC ACGC GG-GACGCC            AAACGCGTGTGCGAG  41 213
LCP49_RS06885 1462478 .. 1462509 -  -7.8  -3.21099   GTTCCTGATCATGAA      CGCGATCGGGCTGG GGAT CCAGGCCGGCTGCG       TGGCGATCGCGCAGT  55 304
LCP49_RS06875 NONE
        purE 1460281 .. 1460299 -    -8  -2.62184   TGGCGGGCGACATCA             GCGGTCGG CGG CCATCCGC             TCGCGCAGGCGGGCC  49 4
LCP49_RS06865 NONE
        manA 1457106 .. 1457136 -  -3.9  -3.56325   CGCCGAGAAGCAGAA      GGCCCTCGACGCCG GCCT CGACCTCGACG-CC       GTGCTGACCACGGAC  52 268
LCP49_RS06850 NONE
LCP49_RS06845 NONE
LCP49_RS06840 1453404 .. 1453440 - -27.4  -2.70932   TGCTGGCGTGAACGA    CGAGCGGCCGCCCTCC GCACG GGAGGACGGCCGCTCG    TCGTCGTGGCCCGGG 100 75
LCP49_RS06825 1449778 .. 1449800 - -12.6  -2.65442   AGATCATCCAGACGA           CGGCGGAGCG CCT CGCCCAGCCG           GCCGAGGGCCGCGCC  58 460
LCP49_RS06815 1448442 .. 1448454 -  -7.7  -3.40403   CCGCCTGCAGGAGAA                GTACC CCG GGTAC                CTCCAGGAGCCGGCC  56 229
LCP49_RS06800 1446341 .. 1446371 -  -3.1  -3.59979   CGCCCGCATGCGAAA      GACCCCGC-CGACC AGGA GGACGCGCGTGACC       CGAGGGCTCCGTGCG  54 152
        greA 1445665 .. 1445708 -  -2.8  -3.24747   GGGCCAGAGTAGCAA CGGGGGCGCGG-TGGGACCCG GGA CGGACGACGGCCGCGGCCCCT GGAGGGGACCGCGGC  45 62
LCP49_RS06790 1444770 .. 1444799 - -12.1  -2.62184   CGGGGCGCTATATGA       CCGTGCGCATCCCG CTG CGGGAC-CGCCCGG       GCGAGCTGGCCACGA  58 236
        sdhC NONE
LCP49_RS06675 1420725 .. 1420736 -  -3.6  -3.31144   GGGTCAGCCGCAGAA                GGCC GGGG AGCC                 CTCGAGCAGGGCGCC  47 2
        sdhA NONE
LCP49_RS06665 1418063 .. 1418074 -  -5.8  -3.40403   TGCGGGGGATCAGAA                CTGG CGGG CCAG                 GATGGCCTGCTTCAC  53 8
LCP49_RS06620 1409298 .. 1409310 -  -7.7  -2.78935   AGACGTTCCAGCACA                TGGAC TGG GTCCA                GATCGTGCTGATGCC  47 283
LCP49_RS06590 1402559 .. 1402617 - -18.2  -2.78813   GCTGACCGGAACAAC CGCCCCACGACGACGGCGGCCGCCCCCTC GTGT GAGGGAGCGGCCGCCG-CG-CGTTCAGC- GGAGCCCGCGCGGGC  74 62
LCP49_RS06580 1399912 .. 1399924 -  -6.9  -3.05844   GGGCTCAGCTGAAGA                CGACG GTC CGCCG                GCCGTCCGTGAGGAC  50 2
LCP49_RS06575 1399282 .. 1399300 - -14.6  -3.07962   GGGGAGAGCGGAAGA             GGTGGGCA TGG TGCCCACC             GTCCCACATCCTCCG  67 49
LCP49_RS06570 1397790 .. 1397814 -  -8.4  -3.28712   GGTGCCGCCCGAGAA          GGCCCGCGCC GCCGA GGGGCGGGAC          ATCGTGTTCCTCGGC  55 506
LCP49_RS06540 1388952 .. 1388965 -  -8.1  -3.40403   CGCGGCCGACCAGAA               GGTCC TGGC GGACC                GGCTGGTCGCCTCCG  58 146
LCP49_RS06530 1386424 .. 1386450 - -10.7  -2.90194   AGCTGGCGAAGCAGA         CCGAGGACGCC GAGCT GGCGGCCGCGG         CGAAGCCGATCGCCG  56 350
LCP49_RS06510 1379146 .. 1379167 -  -8.7  -2.70932   GGTGTCCCCGAAGGA           CCACGCG GACCGGCG CGCGTGG            GACGAGGCGCTCGCG  49 375
LCP49_RS06500 1378149 .. 1378193 -  -2.9  -2.58544   CGGGAGGGGGAGAAC CACCTCGACGACTGGC-TGCAC ACCC GT-CACGGCAGCCG-CGCGGTG TCCTTGACACTGTCC  40 339
LCP49_RS06490 NONE
LCP49_RS06485 1374593 .. 1374615 - -10.4  -3.00525   GTTGCCGAAATGAGA           CGCGGGCCAC CCC GGGCCCCGCG           TTCGGCTCAGCGCGG  58 32
        gdhA 1373039 .. 1373095 - -43.4  -2.52464   GGTGCCCTCAAGCGA CCGCCGCCCTGCGACATCACCGCGCGT CAGA ACG-GCGGTGATGTCGCAGGGCGGCGG AGGATCACGGAAGGG 100 54
LCP49_RS06475 1371780 .. 1371798 - -10.2  -2.64616   CGCCCAGCGACATCA             CCGCCGTG CAG CACGGCTG             CGATGTCGCAGAGCG  54 98
LCP49_RS06455 NONE
LCP49_RS06450 1367656 .. 1367672 - -10.1  -2.57132   GTGTTCCCGGACAAG              GCGTCCA TCA CGGACGC              GACGAACAACGTCCT  53 364
LCP49_RS06420 1361500 .. 1361550 -  -7.3   -2.7035   TGTACGGAGACACTA GGGGCCGGGGGGAGCCCGCGGG AAGGGTCG CCCGCCGCCGCCCGCC-GCACC ACGTGGCCTCGGCCA  47 94
LCP49_RS06415 1360021 .. 1360056 -    -3  -3.06183   CGCAGGCGGACGGAA    TCG-CGCGGGAGCAGGC CCG GCCGGCCCTGGCGTCGG    TGGCCTGCATGGTCG  43 175
LCP49_RS06400 1357768 .. 1357795 -  -5.5   -3.7108   AGGTGGAGATGGAAA        GTGAGCGTCGC CGAGAT GCCACACCCAC         GAGGATCTGGAGACG  61 377
LCP49_RS06395 1356550 .. 1356568 -  -2.2  -3.65046   CGCGCAGGCCAAGAA             GGAGGCCC TCG AGGCCGCG             GGCGTGAAGGTCGGC  54 206
LCP49_RS06375 NONE
LCP49_RS06370 NONE
LCP49_RS06365 1349365 .. 1349388 -  -6.6  -2.72344   GCCGACGCGGAATGA          GGCGGCGGCCG GAC CGGCCACC-CG          GGTGCCCCAGGCCGG  47 27
        serC 1344736 .. 1344766 - -25.4  -3.12351   GGGGCGGACACGCAA       CGGGCCCGCGGTGG AGT CCCCCGCGGGCCCG       TGTCCCCGTCCGGGG 100 46
LCP49_RS06330 1343265 .. 1343275 -  -6.8  -3.03124   CCCGACCTGGGAACA                 CCCT GAA AGGG                 TGCTGGATGTCACGG  49 61
LCP49_RS06325 NONE
LCP49_RS06320 NONE
LCP49_RS06315 1340318 .. 1340361 - -27.4  -3.16564   CCCCCACTCTAGGAA GCACGGACCGGGGCGCGGCC GGCC GGCCGCACCCCGGACCGTTC CGGGCGCTCAGAACC 100 33
LCP49_RS06310 1339201 .. 1339216 -  -6.8  -3.34233   GGACAAGCCCGAGAA              GGCCGCC GCC GGC-GCC              GAGGGCATGGACCCG  56 178
LCP49_RS06290 1335196 .. 1335210 -  -4.2  -3.05384   CTGCTGCCCACCGAA               CTCGTG ATG CACCAG               CGCGGCTGACCGGCG  44 48
LCP49_RS06260 NONE
LCP49_RS06235 NONE
LCP49_RS06230 NONE
LCP49_RS06225 1319163 .. 1319209 -  -4.4  -3.29461   CAATGTCTCGCAGAA CGGAACGGTGGGCCAGGGACCGG GTGC CCGG-CCC-GGACGAGC-TTCCG GCTCAGATCCGGCCC  49 49
LCP49_RS06220 NONE
LCP49_RS06215 1318162 .. 1318188 - -25.2  -3.21416   CACCCCGACCAGCAA         GAGCCCCCGCCG GAT CGGCGGGGGCTC         TTCTCGTCTCCGGGT 100 60
LCP49_RS06205 1317301 .. 1317327 -  -2.8  -3.53563   ATAGCGTGGGGGAAA         CGCCCGGTTCCA TTC CGAACCCGGAAG         CTAAGGCCCACAGCG  50 219
LCP49_RS06140 1297804 .. 1297835 -   -10  -3.39327   CTCGGAGATCGACAA      GGTCGTCGGCCTCG AGCT CGGGGCGGACGACT       ACGTGACCAAGCCGT  63 506
        phoU 1295135 .. 1295145 -  -6.8  -2.71364   CGAGGCCCTCAAGCA                 GGTC ATC GACC                 GCCTGCTGCCCTACT  47 366
LCP49_RS06115 1293725 .. 1293775 -  -5.9  -2.78384   GCCCCCGCCAGGACA TG-GGCCCGGCCCTGCGCCGCTGAG GAC CCC-GCGCCGCCGGCGCGGCCCTCA TGACGACGGCGCCAC  45 23
         tmk NONE
LCP49_RS06100 1291351 .. 1291363 -  -6.2  -2.66316   CCGCGGAGGACATGA                CGGC CGGGC GCCG                CGCGGGGGCCGGACT  45 185
LCP49_RS06090 1290466 .. 1290497 - -27.4   -2.9155   GGCCCGAAGACGAGA      GGACCCCGCCGCGT GATC ACGCGGCGGGGTCC       GGGGGAGCCCCCTGC 100 30
LCP49_RS06075 1288653 .. 1288682 - -26.5  -2.73364   CCTCCAGGTGAACGA       GAGGCGGCGGGCC GTCC GGCCCGCCGCCTC        TCGTCGTGTGCACGC 100 40
LCP49_RS06070 NONE
LCP49_RS06065 NONE
LCP49_RS06055 1280216 .. 1280265 -  -4.7  -3.60627   CCAGGGCAGGGCAAA GGAACGCCGTGCTCACG-GGCGGG ATC CCCACCGCGCACGAGCGGGGCCCC GGATCCATGGATCCG  56 95
LCP49_RS06050 1280014 .. 1280042 - -18.2  -3.65425   CGCAGACATGGGAAA        GGCCCCGTAACC ACTGG GGTCACGGGGCC        TTATCGCGGAGACGG  91 32
LCP49_RS06045 NONE
LCP49_RS06040 NONE
LCP49_RS06035 NONE
LCP49_RS06030 NONE
LCP49_RS06025 NONE
LCP49_RS06020 NONE
LCP49_RS11650 NONE
LCP49_RS06015 1275085 .. 1275096 -  -5.8  -3.96148   GCCGCCTACGAGAAA                CGCT CCGT AGCG                 ATCAGCTCGAACCTG  64 177
LCP49_RS06000 NONE
LCP49_RS05995 NONE
LCP49_RS05990 NONE
LCP49_RS05985 1271120 .. 1271133 -  -5.2  -3.57144   GGTCTCAGCCCGAAA               CGCG GGGGCT CGCG                TCCTTCGTTCGGCAC  52 91
LCP49_RS05980 1270232 .. 1270250 -  -4.4  -2.87931   CCCAGCGGGCATAGA             GCGTGTCC CCG GGCCAGGC             GGACGGGTCAAAGGC  44 106
LCP49_RS05975 1268485 .. 1268534 - -22.9  -3.54741   CACCACCCCCGGAAA CACGAA-TGGCCCCGACCATCCCG CAA CGGGACGGCCGGGGCCGCTTCGGG TGTGAATCAAGCGCA 100 32
LCP49_RS05965 NONE
LCP49_RS05955 1262291 .. 1262347 -  -5.7  -3.01712   GGCCGGGCGGCAACA GCGCCTACCGGCTCG-GGTCCGTGTAC GGCCG GTTCGCCGTCCCCGAGGCGAT-GGCGC AGATGCTGCGCACCG  46 194
LCP49_RS05945 1259739 .. 1259757 -  -5.8  -2.85351   CTTTGCCAGATTACA             CCCGGCCG TCG CCGTCGGG             AACTCGCCCCCGGCC  46 48
LCP49_RS05940 1258406 .. 1258424 -  -9.5  -3.31144   CTTCGAGGCGCAGAA             GGCCCGG TTCGC CCAGGCC             TGAGCCCCGCCGCAC  59 96
LCP49_RS05930 1256230 .. 1256255 - -21.9  -3.24747   CGCCGACATGACGAA         GGCCCCGCTCC AGCA GGAGCGGGGCC          TTCCGATCGTGCGCC  95 34
LCP49_RS05910 NONE
LCP49_RS05905 1251947 .. 1251974 -  -5.4  -3.53012   GGCGGCGCGCCCAAA        CCGGCCGCCCGCC GTC GTCGGGCG-CGAG        CGCGTTCAGTCGCGC  52 31
LCP49_RS05900 1251782 .. 1251806 - -18.6  -3.57144   CCCGGCATGGCGAAA          GCCCGGGAGC GCAGG GCTCCCGGGC          TTCACATCTGGCGGT  88 34
LCP49_RS05890 NONE
LCP49_RS05885 1245000 .. 1245012 -  -6.9  -3.23274   CCCGTGACAACTCAA                CCCGC GTT GCGGA                CGGACGGAAGGACGG  53 59
LCP49_RS05880 NONE
LCP49_RS05875 NONE
LCP49_RS05870 NONE
LCP49_RS05865 NONE
LCP49_RS05860 NONE
LCP49_RS05855 1237934 .. 1237944 -  -6.8  -3.06492   CCACCGACCCGAAGA                 GGTC ATG GACC                 TGGCCGAGGCCGCCG  50 289
LCP49_RS05845 NONE
LCP49_RS05840 NONE
LCP49_RS05835 1235055 .. 1235086 -  -7.2  -3.25823   GGTGCGCCACACGAA      CCGCACCCCGGAG GGCGTGT CACCGGGG-ACGG      GGCCGGCTCTCGACG  53 60
LCP49_RS05830 NONE
LCP49_RS05825 NONE
LCP49_RS05820 NONE
LCP49_RS05815 1229107 .. 1229123 -  -2.9  -3.21276   CCGGCGTTCAGAACA              TTCCACG CTG CTCGGAA              CCGGGGTCCCGCTTG  45 1
LCP49_RS05810 1228324 .. 1228342 - -13.1  -3.17075   TTCCGTCCAACCGAA             CCCCCGC CCCGC GCGGGGG             TTTCGTGTATCCGAT  65 42
         tgt 1226793 .. 1226812 -  -4.8  -4.08571   TCAGAACAGCAGAAA            CGTCTGGC TCGC GCCCGTCG             CAGCGTGCTGGCTCC  64 74
LCP49_RS05800 1225456 .. 1225475 -  -7.8  -3.35996   CATCCTCATCCAGAA            CGAGGTGG CCCG CCACTTCG             CGGACATCGAGGCGA  58 221
LCP49_RS05790 1223592 .. 1223609 -  -3.3  -3.28712   GTTCGGGGCGGAGAA             CGCGCAGG TCG CCGGC-CG             CTGAGGGCGGGGCGT  47 40
LCP49_RS05770 NONE
LCP49_RS05765 NONE
LCP49_RS05760 1219384 .. 1219409 - -19.1  -3.28791   ACGCGGTTCCGAGAA         GGACGATGGCC ATCC GGCCATCGTCC          TTTCTCGTTGCGGGC  84 45
LCP49_RS05745 1216846 .. 1216872 -  -7.9  -3.08015   TGAAGGACCTCAACA        CGCGGCGCAACG AGAT CGCGGC-CCGCG         GCTGACCCCGCCGCG  53 42
LCP49_RS05725 1210916 .. 1210943 - -20.6  -3.53012   CTTTCGTTGCCGAAA        CGGGAGGCGCCG TCGT CGACGCCTCCCG         TCACCGTGCCCGCGC  90 41
LCP49_RS05720 NONE
LCP49_RS05715 1207555 .. 1207588 -    -3  -3.37796   GCGGATCATGCAGAA     CGCGGACA-TCACCC TGGAC GTGCGCCTGCCCGCG     GACGCGATCCTGCCC  49 489
LCP49_RS05705 1204873 .. 1204895 -    -9  -2.62184   TGGCGCTCCAGACTA           GCGGCGCACC GGG GGTCCCCCGC           CACCGCCGGACACGG  52 67
LCP49_RS05700 1203848 .. 1203863 -    -9  -3.14132   GGTCCTGGCGATCAA              CACGGT CGGC ACCGTG               TCGATGATGGCCCAG  56 463
LCP49_RS05690 NONE
        mmsB NONE
LCP49_RS05680 NONE
LCP49_RS05675 1198608 .. 1198624 -  -5.7  -3.08679   CGTGGCCACCGAACA              CGGCTAC GAG GCCGCCG              ACACCGCCCTGCAGC  48 260
LCP49_RS05665 1196455 .. 1196499 - -28.9  -2.71011   ATCTCGGGGGAATGA GCGCTTTCGAACGTGAGATAG GCC CTTTCTCACGTTCGAAAGCGC TCGGGTGCTCGGGCG 100 50
LCP49_RS05645 1191597 .. 1191610 -  -3.7  -2.68434   GTGCAGACCAGACTA               GGGGC ACGG GGCCC                TGCAGGCCATGGGGT  41 106
LCP49_RS05640 NONE
LCP49_RS05635 1188747 .. 1188770 -    -6  -3.52539   CAAGGCCAACGACAA          CTCGGGCATCT ACC ACATGCCCG-G          TCAGCAGCACTACGG  56 137
LCP49_RS05620 1185768 .. 1185781 -  -2.3  -3.05844   CTGGTCAGCGCAACA               GGTCG CGCT CCACC                CAGCGCAGCAGGGAC  43 1
        poxB NONE
         ffs 1181707 .. 1181721 -  -6.4  -3.53224   GATCTCCTGGGGAAA               GTGAAG ACC CCTCAC               GCACCTGCCAGAGCC  54 10
      gluQRS 1180207 .. 1180223 -  -7.9  -3.72324   GACCGCCATGAACAA              CCAGCCG CTG CGGCTCG              ACGTCGTGGACAGCC  63 505
LCP49_RS05585 NONE
        recR 1175527 .. 1175551 -  -7.7  -2.78384   GCGGTCTCGACCAGA          GCGGCGTGCCG GAC CGGCAGGGCAC          CTGGCCGGTGTGGCC  47 193
LCP49_RS05565 1171810 .. 1171868 - -20.6  -2.50994   CGGAACGGGAGGAAC CGCCCGCACGACGCCGGCCCCGCACCTTCA CGC TGAAGGTGCGGGGCCGGCGTCGTG-GT--- GGGTGGGGGAGGGGC  80 51
LCP49_RS05555 1167448 .. 1167468 -  -3.9  -2.73364   CGGCCATCCTAATCA            TGGACGTGC GCT GGAAGTCCA            CTCGGCGTCCGGCCC  41 2
LCP49_RS05550 1165377 .. 1165389 -  -4.7  -3.23274   CCCGCGACAACTCAA                CCAGC GTT GCAGG                GCCGCCCCGGGCGCG  49 114
LCP49_RS05545 1163898 .. 1163923 -  -7.5  -3.62522   CAAGCGCGTGAAGAA         CCGCGCCCA CATGGACC TGCGCGCGG          CCGCCGGCTCGACGC  61 385
LCP49_RS05535 NONE
LCP49_RS05530 NONE
LCP49_RS05525 1162137 .. 1162153 -  -4.3  -2.57132   GTGCCGCGTCAGAAG              GCGGAGA AGA TCCCGGC              GCCCACGCTGAGGAC  42 2
        purS NONE
        purQ NONE
        purL 1157871 .. 1157927 - -36.9   -2.6927   AGCCCTGAGATACGA CGAGCCCTGCGCAGTGGGGCCTATC GGTACTG GATAGGCACCACTGCGCAGGGCTCG TCGCTTCTGTCCCAG 100 43
LCP49_RS05475 NONE
LCP49_RS05470 1153851 .. 1153863 -  -2.6  -3.14132   GTCCGCCGGCACGAA                GGCC GTGGT GACC                CTCTCCGAGATGGGC  44 161
LCP49_RS05450 NONE
LCP49_RS05445 NONE
LCP49_RS05440 1147338 .. 1147350 -  -4.7  -3.04144   GCCGCACCTTCAACA                CCGGC ACG GCCGC                GCTGCCCAAGGACGA  45 481
         acs 1143868 .. 1143893 -  -5.3  -2.72344   GGTGACGGCCAACGA         CGCGGACG-CGG TGG CCTTCGTCCGCC         GGACCGTGGAGGACC  44 234
LCP49_RS05400 NONE
LCP49_RS05395 NONE
LCP49_RS05390 1135079 .. 1135091 - -10.5  -3.23274   CCGGTGATAACTCAA                CCCGC GTT GCGGG                GAGCGGGCGGCCCGT  61 44
LCP49_RS05385 1133864 .. 1133920 - -15.4  -3.05384   GCCGGTGGCATGCAA CGCAGGTTGAGTTATCACCGGT TACGCGGGCCTGG ACCCGTGACAACTCAACCCGCG TTGGACGGGACCCGT  71 76
LCP49_RS05380 NONE
LCP49_RS05375 1131822 .. 1131858 - -15.9  -2.70932   GCGGGTGCGCAACGA   GGGCCGGACGACGCCC GACACG GGGCGTCGTCC-GCCT    AGCGGTCCAGTTCCT  67 24
        hutG 1130723 .. 1130747 -  -9.9  -2.52464   CCCCGCCTGAAGGGA          CCCCCGGCCTG CCT CAGGCCAGCAG          CGACGCGTCCGTCCG  51 14
LCP49_RS05345 NONE
LCP49_RS05340 1122034 .. 1122060 -  -4.9  -2.78935   AGAGTGGTCACGACA         CGCCGTCTGCC ATTCG GGCGCGCGGCG         AGTCGTGAGCACAAC  42 70
LCP49_RS05315 1114968 .. 1115001 - -26.7  -4.12532   CCGGTCACAGAGAAA     GGCCCCGGTCCCGGC TCTC GCCGGGCCCGGGGCC      TTCTCCGTCATCACT 100 67
LCP49_RS05300 1110559 .. 1110580 - -10.1  -3.01791   AGTTCGGCGTGAACA           CCGGC-CGCC CGC GGCGCACCGG           CTGGTACGACGCCGT  57 523
LCP49_RS05290 1108708 .. 1108738 -  -6.1  -2.62983   CGGACCTGCAGATGA      TCGCCGACGC-CGGC TTC ACCGTGC-TCGGCGC      CGAGGAGCGTGCGCA  45 260
LCP49_RS05250 1101947 .. 1101962 -  -4.6  -3.29144   GCAGTGGGCCCACAA              CGGCAC CGGT GTGCAG               CTGACCGAGGGCGGC  48 319
LCP49_RS05235 1097141 .. 1097171 -  -3.1  -3.30771   GCACATGTTCGAGAA      CTACGACGGCGTCC TGAA GGTCGACGGCG-AG       GTCGGCGACAAGAAG  47 205
LCP49_RS05225 NONE
LCP49_RS05220 1093720 .. 1093747 - -10.5  -3.28712   GCTCGCCGCGCAGAA        CGGCGCAGGACC GCGCA GGACC-GCGCCG        ACGACGTGCGGCGTG  61 47
LCP49_RS05205 1091278 .. 1091316 - -18.1  -2.78384   TCGTGCTGGAGGACA   CCTCGACGACGGGCGGC TCCGC GCTGACCGCCGTCGAGG   GTGTGCGCAACGCGG  76 192
LCP49_RS05195 1089683 .. 1089703 -    -9  -3.29144   GGATCTCGCTCATAA           CCCGAGCCT AGCC AGGC-CGGG            ACGGAATCGGCAGGG  59 56
LCP49_RS05190 NONE
        nadE 1088243 .. 1088270 -    -4  -3.06796   GGCCAGGCTATCGAA        GGGCGCGGACACC GTG GG-ATCGGCGCCT        CAGCGCCACCAGTCG  44 25
LCP49_RS05180 NONE
LCP49_RS05175 NONE
LCP49_RS05170 NONE
LCP49_RS05165 1082821 .. 1082850 - -25.1  -3.40403   CGGCCCCGACGAGAA       CGGCCCCTGTCCC GCGC GGGACAGGGGCCG        TCGTCGTCGTGGGGG 100 41
LCP49_RS05155 1080331 .. 1080348 -  -4.8  -3.01924   GATCGCCTCCGAAGA             GCCGGCG CTGGC CGC-GGC             GATGCTCGACTTCCT  45 133
LCP49_RS05130 1078324 .. 1078348 -  -6.3  -2.62184   GCGCGGGGGACAGGA          CCGCCGTCG TGGTGGG CGTCGACGG          TTCCGAGCAGGGCCG  45 487
         pta NONE
LCP49_RS05095 1070917 .. 1070943 -   -10  -3.28712   CGGTCGGGTGCAGAA         GCGCCCCGTTCG TGT CGACCGAGCCGC         AGCGACATCACTGCC  59 95
LCP49_RS05065 1062712 .. 1062741 - -11.3  -3.83568   CGACAGGCAGAAGAA       GGGCAAGCCCGCC GCCT GACGGCCCCGCCC        CCGCGCGTCCGTCGC  76 143
LCP49_RS05045 NONE
LCP49_RS05040 NONE
LCP49_RS05035 1058186 .. 1058204 -  -6.6  -2.80816   CCTCGAGCCAGCAGA             CCGAGGAC TAC GTCTCCGG             CCGTTTCGGCTGAGC  48 131
LCP49_RS05010 NONE
        radA 1050531 .. 1050578 -  -4.1  -2.52516   CTGGGCATCACGAAC CTCTCCTCGACCCCGTGCCGCAC GGAT GTG-GGCACGGC-CCGACAGGAG TTCAGGATCCGCACG  41 489
LCP49_RS04995 1048745 .. 1048760 -  -4.6  -3.28712   CGTGCTGCTCCAGAA              GGAGGC TGTG GCCTAC               TACGAGGCCATCCAG  48 456
LCP49_RS04935 NONE
LCP49_RS04930 1035649 .. 1035668 -  -3.4  -3.62046   CCAGGTGGTCAAGAA            CCTCGACG CCTT CCACGAGG             CGTTCGGCACGCGCG  55 131
LCP49_RS04875 1023730 .. 1023785 -  -9.6  -3.28712   CGCCGCGCTGGAGAA CG-CGCTCACCGACGGCGACGGCGCC CTCACC GGCCCCGTGGCCCGCGGCGA-CGTCG ACACGCTGCGGACCC  58 377
LCP49_RS04825 1014046 .. 1014068 -  -4.1  -2.73681   CATCGACGTGAAGTA           CGTCGGG CGGGACATC CCCAACG           AGTTCGTGGTGGGCT  42 150
LCP49_RS04800 1008925 .. 1008960 - -29.8  -2.62616   CCAGCCCGCAGACGA    CGCCGGCCGCCCACCC CGAG GGGTGAGCGGCCGGCG     TCGCGCGCGTGGGCG 100 50
LCP49_RS04795 1008057 .. 1008075 - -10.2  -2.78384   TGGCCCCCGAGGACA             CCGTGGCC GTG GGCGACGG             CCGCAACGACATCGA  54 216
LCP49_RS04780 1004672 .. 1004719 -   -17  -3.72576   CTTTCGTTGACGAAA CG-GGACGATCACCGCGACGACG GGC CGTCGTCGCGCTTCCCGTCCGCG CGTCGCCCCGGCGTC  88 103
LCP49_RS04765 1001696 .. 1001740 - -15.8  -2.78384   CCCTGGGTGACTACA CCTCGACCTG--ACCGGCCGGC TCA GCCGGCCAGCAGCAGCTCGAGG TGCGCGGCCAGGGCG  67 1
LCP49_RS04745  997191 ..  997240 -  -9.9  -3.03124   GCGGACGGGGGAAGA CGCGCGGCCCACCGGG-GCGAC GCCGGCG GTCACTCCCGGCAGCCGGCGCA CAGCCCCCAGTAGTA  55 5
         pgm  995370 ..  995386 -  -5.7  -3.90291   ATTTCCCGAACGAAA              GCGGTGC GAC ACGCCGC              CGTTTCCCGAACGAA  63 73
LCP49_RS04735 NONE
LCP49_RS04720 NONE
LCP49_RS04715 NONE
LCP49_RS04710 NONE
LCP49_RS04705 NONE
LCP49_RS04700 NONE
LCP49_RS04695  985418 ..  985462 - -10.1  -3.28712   GCCGGGCGTGCACAA GGCCGCGACCCTCGCCGAGTTCG CCA CGAGC-CGG-G-GGGTCGCG-CC GGCCGACGTCGTCGC  61 235
LCP49_RS04685  983621 ..  983633 -  -3.3  -3.29511   GGGACGCCCCCAGAA                GGGTC AGA GACGC                AGACGATCCCGGCCG  47 43
LCP49_RS04675  980912 ..  980924 -  -3.3  -3.30124   GTTCATGGCCGAGAA                CCGGT TCC ACCTG                TGCCCGCCGCTGAAC  47 264
LCP49_RS04645  974272 ..  974328 -   -32  -3.17392   CACCCCCGAAGGCAA CGCGGGTTGAGTTGTCACCGGTGTGCGG CCT CCGCAC-CC-ATGACAACTCAACCCGCG TTTCTGGTGGGCGGC 100 49
LCP49_RS04625  970479 ..  970506 - -22.8  -3.22298   CGCACCGAGGACGAA        GGCCCCGGAACC GTGT GGTTCCGGGGCC         TTCGGCGTTCCCAGG  95 161
LCP49_RS04615 NONE
LCP49_RS04610 NONE
LCP49_RS04605  966940 ..  966953 -  -3.7  -2.62184   GTGCGGGGGAGATCA               CCTCG GTCA CGGGG                CCTCACCTCCCGTCG  40 18
LCP49_RS04600 NONE
LCP49_RS04595 NONE
LCP49_RS04590  961973 ..  961984 -  -5.8  -2.87132   CTGCTCGTCCACAGA                CACG TCCG CGTG                 GTCGTCCCGCCCGCC  46 43
        pknB  959159 ..  959197 -  -5.1  -2.78384   TCGCTGCCGAGCACA  CGGCGGTGCTCATCTCGCC CGG GCCGGG-CGCGC-CCGCCG  ACGCCGGTGTCTCCC  44 521
LCP49_RS04575  958455 ..  958478 -  -5.2  -3.29829   CACACCTGTGGACAA          CTCCGGGGACA ACT CGTCTCCGG-G          CGGGATCGTGCGGAT  49 87
LCP49_RS04560  955325 ..  955382 -  -2.5  -3.28712   CCCGGCGGTGGACAA GGCCCGCGCCCCGTTCGACGGCGA CCCACCGACTC CCGCC-CCGACCGGCGCCCGGACG CGCGCCGGCCCGCGC  45 111
LCP49_RS04555  954610 ..  954629 -    -7  -3.28712   CCCCGTGCCTCAGAA            CCTCCAGG GCTC CCCGGGGG             CCAGGCGTCGGTAGT  53 0
        rpmH NONE
        rnpA NONE
        yidD NONE
        yidC NONE
LCP49_RS04470 NONE
        rsmG NONE
LCP49_RS04460  937054 ..  937082 - -18.2  -3.79747   TCACTCACGACGAAA       CCCGCCGG-GGGA CTGC TCCCTCCGGCGGG        CTTACGTCGTCGTCA  93 82
LCP49_RS04455  933073 ..  933089 -  -9.4  -3.28712   CGTGGGCTTCCAGAA              CGGCGA GAAGG TCGCCG              AGTCCGTGGGCGCCA  58 205
LCP49_RS04425 NONE
LCP49_RS04420  924972 ..  925013 - -12.1  -3.53224   TATTCCGCTCTCAAA GCACCGGGTTCCGCCCCCGG AAG CGGGGGGCGGGCGCCGGT-C AGTGGTTCCGCAGCG  68 24
LCP49_RS04415  922423 ..  922452 -  -8.5  -3.40403   CTCGCTCGAGTACAA       GCTCGAGGTGTGGG ACT CCCCCAACTCG-GC       CGGCGTGATCATCGA  58 302
LCP49_RS04405  919726 ..  919741 - -11.8  -3.37493   GCGCGAACAGATGAA              GGCGGC CACG GCCGCC               TCCGGGGCGCAGTGC  67 130
LCP49_RS04395  917868 ..  917898 -  -3.3  -3.64703   CTTCTCCGACCGAAA      TCTCTGGCTCGCGG CCAT CCAGGAG-CAGAAA       TCTCTGGCTCGCCCC  54 59
        rpsF NONE
LCP49_RS04385 NONE
        rpsR NONE
        rplI  915530 ..  915574 - -30.3  -2.87344   TATCGCGCCCACACA CGATGATGCCCCGCCCGTT TGAGTGG AACGGGCGGGGCATCATCG TGTGGATGTCGCGGG 100 65
LCP49_RS04365  912847 ..  912871 -  -3.3  -2.78816   CCACCGGCGAGGACA          CCGCCGCCGTG CAC CCCGACGTCGT          CGACGGTGAGCAGGA  41 325
        rimK  910015 ..  910072 - -16.4  -2.59742   GGCAAGCTGGACAAC TGCCGCGTGGCCATCG-GCATCGCGCGGG AGG CCCGCGAGATGCTCGGCGG-CA-ACGGCA TCACCCTGGAGCACT  69 178
LCP49_RS04335  906636 ..  906653 -  -2.6  -2.57211   ACTCCTGTGGACAAG             GTGCCC GGATCT GGGGAC              GGCGAAGTTGACAGC  38 66
        dnaB NONE
LCP49_RS04325  902868 ..  902888 -  -2.4  -3.44146   CTCCCGCAGAAGGAA            GCGCCGGT CCCCT ACCGCCTC            TCCGACGCGACGCAC  48 276
LCP49_RS04290  892295 ..  892311 -  -2.1  -3.71848   GCGTCCGAGCAAGAA              GGCGCGA TGC TCGTGCT              TCCTCGTCCTTCAAT  55 440
LCP49_RS04285  891161 ..  891175 -  -5.7   -4.4261   GTTGCAATACTAAAA               TGCCA TGTTC TGGCA               GGAACAATATATTGA  76 48
LCP49_RS04280  890299 ..  890323 -  -2.6  -3.14132   GTGGCCGTCCACCAA          CCGGACGCGG AACCA CCGCCGCCTG          TGCACGCTGAGCATT  44 451
LCP49_RS04265  886860 ..  886874 -  -2.8  -2.66274   TGTCTGACAATGAAT               CCAG GGGTCGG CTGG               CCTCCTCGAAGACGT  39 312
LCP49_RS04250  885130 ..  885140 -  -2.4  -2.56914   TATTCGAGGAATTCA                 GCGG TGG CTGC                 TGTGCCTGGATGGCG  38 127
LCP49_RS04230  879406 ..  879435 -  -6.4  -3.02511   TGGATGCCCGCAACA      CG-GCGTC-CGCCC GACT GGCCGAGACGCTCG       GTATGCGTCGAGAGG  48 204
LCP49_RS04205 NONE
LCP49_RS04200 NONE
LCP49_RS04195 NONE
LCP49_RS04190 NONE
LCP49_RS04185  873276 ..  873288 -  -5.5  -2.90723   CGATGGCGAAGGAGA                CCATC GAG GACGG                CGGCAGGCACCACAC  46 50
LCP49_RS04180 NONE
LCP49_RS04175 NONE
LCP49_RS04170  871188 ..  871237 - -14.2  -2.74563   CGGACACGGTAAGGA GGCCG-CCGCGGCCGGAGCGGGTCG AGG CGGCT-GC-CCGGCCGGGGGCGGCC GCCCGGCCCTCACCC  64 35
LCP49_RS04165  870300 ..  870317 -  -8.3  -2.94218   AGGCGTGAGGAGACA             GCGGCCG GGTG CTGCCGC              TCAGAACAGTGCCGC  52 26
LCP49_RS04150 NONE
LCP49_RS04145  865871 ..  865894 -    -3  -2.87132   TCGGCCGGCCAGACA          CGCCG-TGCCG CCC CCGCACCGGCT          CACCCCTGCCCCGCT  40 25
LCP49_RS04140 NONE
LCP49_RS04135 NONE
LCP49_RS04130  862951 ..  862985 -  -7.7  -3.86015   GATTCGGCCCACAAA    GTGCTCGGCCGG-GCC GCCC GGTGCCGGCCGGTCAC     CAGAGCAGCTGGTCC  65 22
LCP49_RS04125  861678 ..  861716 -  -2.4  -2.62184   CGCGGCGGCAGATCA CGTGGCGGG-TG-GTGTGG TTGT CCACGCTCATCCCGCT-CG  CCTGGCTGGCGTTCA  39 272
LCP49_RS04115  860468 ..  860499 -    -5  -3.17212   GGACGAGCCGACGAA      CCACCTCTCCCCCG CGCT CGTGGACGAGATGA       CCGAGGCCCTGCAGG  48 190
LCP49_RS04100 NONE
LCP49_RS04095  854664 ..  854683 -  -7.1  -2.78596   CAGCCCCCCAGCAGA            GCCACGGC TGACC GCCG-GGC            CACCGGACATGCCCC  47 145
LCP49_RS04090  853652 ..  853678 -  -6.5   -3.2794   GCCCAGGGACAGGAA        CGCCCGACTCCG GTCA CGGGGT-GGGCA         TGCCGCCGGTCACCG  51 12
LCP49_RS04080 NONE
LCP49_RS04070  850254 ..  850292 - -12.3  -2.78384   CCCGGCGCGACGAGA   CCGAGCGCCACGGACGA GGGCG TCGCCTCCGGCGCCCGG   CCGGCTCAGAGCGTG  58 31
LCP49_RS04065 NONE
LCP49_RS04060 NONE
LCP49_RS04050  846500 ..  846515 -    -6  -3.01712   TGCTGCTGGTGAACA              TCGGCG ACGA CGCCGG               CCTGCGCTTCCTGGG  48 294
LCP49_RS04040 NONE
LCP49_RS04035  845072 ..  845098 -  -9.2  -3.07816   CGGCGAGCGACTCAA         CCGCTGACGGCG GCG CGACGGCGGCGG         GCGTCGCCTGCCCTC  56 39
LCP49_RS04020 NONE
LCP49_RS04015 NONE
LCP49_RS04010  838371 ..  838391 -  -4.6  -2.62184   GCCTGCCGTACACGA           CCGGTCCGC TGCT GCGG-CAGG            TGGGCTCCGCGTGGA  42 110
LCP49_RS03990  834590 ..  834610 -  -3.1  -3.06915   ACCCACGCTAGTGAA            GGCCCCCGT CAG ACGGCACCC            CCTGCCGCCCCGCTC  44 39
LCP49_RS03985 NONE
LCP49_RS03980  833699 ..  833719 -  -8.1  -3.22475   TCCACCCGGAGAACA            CGGCCTCGC GGC GGGTGGCCG            AGCGGATTGGGATGA  55 173
LCP49_RS03970  832232 ..  832276 -  -2.2  -3.04144   CGCCCACGGTGAACA CGCAGG-GGT-ACGCCGAGCCC GTGCA GGGC-CG-CGTGACCTCCCGCT TCGGGCCCCGCCCCA  42 455
LCP49_RS03955  829602 ..  829616 -  -2.7  -2.62184   TCGTGCTCGAGACCA               CGGGC TCCTG GCCCC               TGCTCCTCCACGAGT  39 325
LCP49_RS03945 NONE
LCP49_RS03940 NONE
LCP49_RS03935  825968 ..  825994 -  -4.9  -2.52464   GGGGTGCGGAAGTCA         TCCCCGCTCAG GCCTG CAGCGCGGGGT         GCAGGTCCTTCATGC  41 6
LCP49_RS03930  825272 ..  825284 -  -9.1  -3.28712   GGTGGCCGGGCAGAA                CACGG ATT CCGTG                CCCGGGGCCCAGACC  58 149
LCP49_RS03915 NONE
LCP49_RS03910 NONE
LCP49_RS03905  822147 ..  822183 -  -5.6  -3.53811   CGGAGGGGCCGGAAA    GCCCGCGGAGTGGTCA GGACA CGCCGTCTCCGCGTGC    GCGACGCGGCGTGTC  54 62
LCP49_RS03880 NONE
        glsA  816252 ..  816283 -  -8.6  -3.92178   AGCAGTTCAACGAAA      GGGAGCGAGACG GAGAACAT CGCCGCGCCCCC       CTCCTGCCCGCCCCG  68 46
LCP49_RS03870  815297 ..  815314 -    -4  -3.33696   GCCGTGCTCAACGAA             CCGGGC ACGGTG GGCCGG              AAGATCGACTTCGTG  51 110
LCP49_RS03835  808455 ..  808471 -    -3  -2.62616   GGATTGCGGACATCA             GC-GTGA CTCG TCACAGC              CCTGACGCATCCGGC  38 89
LCP49_RS03830  807392 ..  807418 - -12.3  -2.87243   TCAGGATCAGAAGGA        CGCCGGCGCCGA TGCG TCGG-GCCAGCG         ACGTGGGCCGCCTGC  60 79
LCP49_RS03825 NONE
LCP49_RS03820  805170 ..  805202 - -27.8  -2.87132   CCCGCCCCGGACACA      CCGCGACCCCCGCC GGAGG GGCGGGGGTCGCGG      TCACGGGCCGCTCGG 100 57
LCP49_RS03810  803286 ..  803330 -  -5.5  -2.72344   TCGGAGGGGGAAGGA CTCATGCCCCCATCATCCTCC CCG GGCGGCTCAGAGGAGCGTGAG CCCCACCTTCACGGC  45 11
LCP49_RS03805 NONE
LCP49_RS03800 NONE
LCP49_RS03795 NONE
LCP49_RS03790  798583 ..  798602 -  -4.9  -3.29461   GAATCGTCTGCAGAA            CTGACCC TTCTGG GGGTCCG             ATCCCGCCTCGGAGG  49 43
LCP49_RS03770  794116 ..  794128 -  -7.7  -2.86271   CTGCCAGCACAATCA                CAGGT CAT ACCTG                GGTATGAGTCGGACG  48 460
LCP49_RS03745  788905 ..  788959 -  -9.9  -3.45054   GGGCAGAACCCACAA CCCCGTCGCCTCCGTGGGCAGAAGAG AGGG CACTTCTGCCCACGGAA-CGCTCTGG CCTGCCGCTTCCGCC  62 88
LCP49_RS03740 NONE
LCP49_RS03735  786611 ..  786641 - -21.3  -3.53012   CCTTTGGGGGCGAAA       GTGGGCGGTATCC CGCGC GGATACCGCCCAC       TTTCGCCCCCGGACG  91 77
LCP49_RS03725  782054 ..  782075 -    -8  -3.85698   CTTTCGTTCGAGAAA           CGGCGGTCC CGCCC GGAC-GCCG           TCGTCGTGAATCCGC  67 260
LCP49_RS03710 NONE
LCP49_RS03705  777989 ..  778024 - -14.8   -3.9398   TCAGAACGGCAGAAA    CGTCTGGCTCACGC GGCGGGGG GCGTGAGCCAGATG     ATTCCGCTGCGGATC  86 85
LCP49_RS03700 NONE
LCP49_RS03695  775747 ..  775767 -  -6.7  -2.65264   GGACGATCCACATCA            CGGGTCAGC TCC GCTTCCCCG            CGCCGGTGGGGATGC  46 9
LCP49_RS03690  774970 ..  774986 -  -4.3  -2.63596   CCGGAGGTCACACGA              GGAGACC GAT GAGCTCC              CGGACGAGGATCACC  42 1
LCP49_RS03685 NONE
LCP49_RS03680  774242 ..  774252 -  -4.6  -3.30124   GCGCACCCCGCACAA                 CCGG CTG CCGA                 ACCACCCGCTGGCGG  49 154
LCP49_RS03675 NONE
LCP49_RS03670  770036 ..  770064 -  -6.6  -2.78547   TCAGGGGACGAATGA       GCGCGGCCACACC GGCA GGGGTGGCC-CGA        CGATCGGGTTTCGAT  47 206
LCP49_RS03665 NONE
LCP49_RS03660 NONE
LCP49_RS03655 NONE
LCP49_RS03650 NONE
LCP49_RS03645 NONE
LCP49_RS03640  764324 ..  764344 -  -3.2  -3.21099   CTGCCTCACCACCAA           CTCCGC-CC TCAT GGCGCTGAG            CGTCGGCGACGCCGC  47 205
LCP49_RS03630 NONE
LCP49_RS03625 NONE
LCP49_RS03620 NONE
LCP49_RS03615 NONE
LCP49_RS03600  756637 ..  756658 - -10.1  -3.16564   GCCTGACCGGAGGAA           CGGCGACGAC CGC GCCG-CGCCG           CCGGCCTCAGTAGGC  59 32
LCP49_RS03590 NONE
LCP49_RS03585  753900 ..  753920 -  -2.5   -2.8474   CCCTAGTCACAAGGA            GGTTGCA CGAAGGT TGCAGCC            GGGCGGGGGTGAGGT  40 51
LCP49_RS03580  752310 ..  752325 -  -6.1  -2.87146   CCGGCTCAGAAGAAC              CCGAG CTTGTC CTCGG               AGTAGGAGACGAGCA  46 0
        adhP NONE
LCP49_RS03565 NONE
LCP49_RS03560  749259 ..  749307 -  -2.3   -4.4078   TTTCCCGAACGAAAA CGCGCTGACGGCCGC-CGTTTCC CGAAC GAAAACGCGCTGACGACCGC-CG TTTCCCGAACGAAAG  70 55
LCP49_RS03550  747545 ..  747579 - -12.1  -3.30124   GGTGACCGGGGACAA    CGCCGCCGT-CGCCAC CCAG GTGGCGGACGCCGTCG     GGATCCCGGCCGCGG  65 496
LCP49_RS03525  742351 ..  742388 - -18.4  -3.06671   ACACCGACGCGAAGA   CCCGTCGGCC-CGCCCC GCGAG GGGACGTGGCCGGCGGG   TCTTCTCGCCTCCCA  82 242
LCP49_RS03515 NONE
        rlmN  739169 ..  739184 -  -7.6  -3.62046   CGACGCCCGCAAGAA              GGAGTT CTGG AACTCC               GCCACCGAGGCGTTC  61 290
        trxA  737325 ..  737361 -    -5  -3.14132   CGGGGTGTGGACCAA   CGGGTTCT-G-CGGGCAC CCC GGGCCCGGCGAGTCCCCG   GCGGAGGCCGTGCTG  48 353
LCP49_RS03485  736257 ..  736304 - -11.2  -2.78793   ACGCAGAAGACACTA CGGGCCGCGCCGG-TC-CCGCG TCCATC CGCGGCGATCCCGGGCGGCGCG ATCTCACGACGCACG  55 56
LCP49_RS03480 NONE
LCP49_RS03475 NONE
        crtI  732491 ..  732518 -  -7.6  -3.31144   CCGGGACGCCCAGAA        GAGGGTGCGG ATCATGTG CCGCTCCCCC         CGGGGCCCGCGGGCC  53 9
LCP49_RS03465 NONE
       crtYg NONE
       crtYh NONE
LCP49_RS03450 NONE
        crtX  729139 ..  729173 -    -7  -3.35679   CGGGCTGATGGACAA    GTTGGCCGGCGGGCC CGGCCT GACCCG-CGGCCGGC     GGGACCCGAACCACC  56 423
LCP49_RS03435  724278 ..  724306 -  -3.8  -4.45544   TTTCATCAACGAAAA       CG-TCGCGACACG CCGC CGTTTCCCGAACG        AAGACGTCCGGCCCG  71 54
LCP49_RS03430  722599 ..  722613 -  -2.1  -3.72315   ACGAGAGCGAAAAGA               TGCGA CTGAT TCACA               ATAAAGACTGTTGCG  55 358
LCP49_RS03420  720705 ..  720715 -  -2.4  -3.14132   TTCGCCGCCTACCAA                 CCCC TGG GGTG                 GTCGGACCGCTGCGG  44 400
LCP49_RS03405  718308 ..  718338 -  -8.8  -2.62263   AGCCCCTCTACACCA       CCGAGGCCATCGCC ACG GGCGGCGGCCGCAA       CGGCCACGTCCGGAC  51 377
LCP49_RS03395  717629 ..  717685 - -33.2  -3.21276   GGCGTCCTGAGAAGA CCGCTCGATGTGCTCAGGACCGCGTC CTCAT GACGCGGTCCTGAGCACAGCAGGCGG TCGCGGGGATCCTGC 100 61
LCP49_RS03380 NONE
LCP49_RS03365  713653 ..  713665 -  -4.7  -3.14683   AGAGCGCGGGACGAA                GGGCG AGG CGGCC                GCAGGACCTCCCCTT  46 108
LCP49_RS03360  713119 ..  713175 - -23.1  -2.52464   GCGTCGCCGAATCCA CTGCGGAACTGACCCTTCTGGCGACCG CCA CCGCCCTCAGAAGGGTCACTTCCGCAG CGGATTCTCAGCCGT  89 33
LCP49_RS03355  712463 ..  712519 - -17.5  -2.52676   GACGTCCGGAATCGA CTGCAGAAGTGACCCCTCTGACG CCCGCTGACAC CCCCAGAAGGGTCACTTCCGCAG TCGATTCTCAGGTGT  73 33
LCP49_RS03310 NONE
LCP49_RS03305 NONE
LCP49_RS03300 NONE
LCP49_RS03295  702811 ..  702822 -  -7.2  -3.05384   CTGCCGGCCAGGCAA                GGCC ACCA GGCC                 CCCTCACTCCCCGCC  50 29
LCP49_RS03290  702236 ..  702246 -  -5.4  -4.10161   GACTACCCGCGAAAA                 CGAA AAA TTCG                 CAGTTTCCTCTCGCG  67 68
LCP49_RS03285  701459 ..  701503 -  -4.8  -2.71144   CAGCCTCGCCAACCA GC-ACGGTCCCGACGCGCGGTG GGT CTTCGC-CGCCGGCGCCGTCGC CGCCTCGGTCCTGTG  42 223
LCP49_RS03275  699738 ..  699776 -  -2.1  -2.83164   GCATGGACGAGCAGA   TCCTGACGACCGGGCGG CTCTT CCGCGCGGTGGCGCGGC   ACCGTGCCACCGGCC  41 351
LCP49_RS03260  696516 ..  696554 - -15.3  -2.62616   CCACGCCGGACATCA   TCGACGCTACGCGGGTC TGACC GACCCGCGTAGAGCTGA   CCCACGCCAGAACTG  66 135
LCP49_RS03255  695515 ..  695548 - -26.1  -2.70826   TACAGGGACAGACGA     CACGGGCCCGCCTGC CGGA GCAGACGGGCCCGTG      CACTCCCTCATCGGG 100 50
LCP49_RS03225  690270 ..  690291 -  -2.1  -3.48924   GCACGTGCGAGACAA           CGCCACAGC ACTG GACGTGGAG            CTGACCCGCGAAGAC  50 522
LCP49_RS03195 NONE
LCP49_RS03190  684420 ..  684441 -  -5.2  -3.07962   CCTGATATGCGAAGA           GTTCAC-CG CGCGT CGTGTGAAC           TCTTCGTTGCATCTC  46 87
LCP49_RS03180  681990 ..  682000 -  -4.6   -3.6608   ACCACCGGAGTGAAA                 CCGC AAA GCAG                 ATCATCGCGCTACTC  57 305
LCP49_RS03165  678882 ..  678897 -  -6.8  -3.66654   GACGTCAACTGGAAA              CCGACC CATA GGTCAG               GTCAGGCTGACACCC  60 274
LCP49_RS03160 NONE
LCP49_RS03155 NONE
LCP49_RS03150 NONE
LCP49_RS03145 NONE
LCP49_RS03140  674943 ..  674965 -  -3.2  -3.65046   GCTGGACTTGAAGAA           CGACGTCGTC CGG GCCGGCGTCC           ACGCAGCCCAAGACG  55 115
LCP49_RS03125  669419 ..  669431 -  -3.4  -3.37796   CCTCATGACCCACAA                CATC TAGGG GATG                GGCACCATTGCGGCC  49 49
LCP49_RS11630  668868 ..  668885 -  -4.1  -4.26076   TGACCCCTATGAAAA             CGCCC-TG GGC CACGGACG             TCGCTCTGAACCTGA  69 304
LCP49_RS03010  649968 ..  649986 -  -2.3  -4.24342   GTCGGCATGAAGAAA             GCCAACC CGCAC GGTCTGC             ACGACATGCTCGGCA  66 346
LCP49_RS03000 NONE
LCP49_RS02995 NONE
LCP49_RS02990  646859 ..  646877 -  -8.2  -3.14132   GCGGTGCGTGACGAA             GCTGATCT CGG AGATCAAC             TTCCTGGCCTCGGCG  53 360
LCP49_RS02980 NONE
LCP49_RS02960 NONE
LCP49_RS02955 NONE
LCP49_RS02950 NONE
LCP49_RS02945 NONE
LCP49_RS02940 NONE
LCP49_RS02935 NONE
LCP49_RS02930  631434 ..  631445 -  -3.6  -3.68351   TGGTCAGGACGGAAA                CGCC GTCC AGCG                 CAGAGCTGAGGTCCA  54 127
LCP49_RS02925  630114 ..  630136 -  -2.7  -3.17392   CATTCGGGAATGGAA          CACCCAGTTC ACCC GCA-TGGGTG           GGGGGGTTGGCGAGA  43 194
LCP49_RS02920  628510 ..  628560 - -27.2  -2.71731   GGCACCCGGGAACGA GCCCTGCGATATGGCCCCTA TCAGCGGGTTT TAGGGGCCATATCGCAGGGC TCGTCACTCAGCAGG 100 65
LCP49_RS02915  626906 ..  626932 -  -7.8  -3.04144   TGGTGACCGGCAAGA         CCTCGGAGCTGC TGG GCTGCTCGGCGG         CCATGCTGCTGAACG  52 487
LCP49_RS02880 NONE
LCP49_RS02870 NONE
LCP49_RS02865 NONE
LCP49_RS02860  612327 ..  612338 -  -3.6  -2.94218   AGGGCTGAGGACAGA                GGCC CCTC AGCC                 CCGCAGACCCCCGAG  43 20
LCP49_RS02840  606689 ..  606726 -  -6.9  -2.62184   CCGGTCCGGAGACGA   GGGGCAGG-GGGTCGG CGCCGGC CCGAGGCTCCCGCCCC   TCTCGCCGAGGCCCG  46 94
LCP49_RS02835 NONE
LCP49_RS02775 NONE
LCP49_RS02770  593723 ..  593756 - -21.7  -2.53876   CTCGACGCGAACTGA     GCGGGC-GGCGGCGGG CGC CCCGCCGCCGGCGCGC     TCACCGGGTTCCCGG  83 26
LCP49_RS02760 NONE
LCP49_RS02755  589706 ..  589717 -  -5.8  -3.16564   CGCTCACGTCAGGAA                GTCG CGCG CGAC                 CCCGAGGAAGCGGTC  48 2
LCP49_RS02740 NONE
LCP49_RS02735  584828 ..  584845 -  -4.7  -3.72576   CTTTCGTTGACGAAA             CGGGCGC TCTC ACCCCCG              CGCCAGCGACTTGAC  59 17
LCP49_RS02680 NONE
LCP49_RS02675 NONE
        pdxS NONE
        pdxT  569032 ..  569068 -    -8  -3.31144   CCTGGACCCCCAGAA   GGACGTCCGCG-TCACCT CCG AGGTGCTCGCGGAGG-CC   TGAGCCCCGCGAGGA  56 0
LCP49_RS02655  567283 ..  567312 -  -4.1  -2.71364   TGAGCCGGCGAAGGA       TCCGGCGCGCGCGG GGT CC-CGCCAGACGGA       CGGCTCCGGCGGTTC  41 39
LCP49_RS02640 NONE
LCP49_RS02635 NONE
LCP49_RS02630 NONE
LCP49_RS02610 NONE
LCP49_RS02605  558370 ..  558406 -   -26  -3.96148   CCCCGTCACGAGAAA    GTCCCGGCCCGCGATC TCAGG GATCGCGGACCGGGAC    GGCCCGTGGAGCTAA 100 30
LCP49_RS02600 NONE
LCP49_RS02595  555620 ..  555641 -  -3.5  -2.78463   ACGGCGCCGAGGACA           CGGACCTGG CCTT CCGCGCCCG            CGACGCCGGCCTGAC  41 333
LCP49_RS02585 NONE
LCP49_RS02580  551150 ..  551165 -  -7.5  -3.17212   CCACCAGGCCAGGAA              CGCGG AGAGCG CCGCG               AAGTCCAGCTCGTCC  50 116
LCP49_RS02575  550040 ..  550088 -  -8.1  -3.90291   ACGGGGTCAAGGAAA CGGTACG-ACCGCCC-CCGCAGA CGTGC TCCGCGGCAGACGGGACGTGCCG CCCATCCTCCACTGG  68 56
LCP49_RS02570  548728 ..  548776 -  -8.7   -4.4078   TTTCCCGAACGAAAA CGCTCGGCGGGCCGGCGCCG-TC ATCTG GATCGG-GCGGGCGCGCCCCGCG AGGGACAGCACGTCC  80 74
LCP49_RS02555  545562 ..  545577 -    -6  -3.15544   CTCGACGTGGACGAA              GCCGGG GTGA CCCTGC               TGCGCGTCCGCGACG  50 166
LCP49_RS02545  543661 ..  543684 -  -2.2  -3.01712   CGCGCCCCCCTAAGA          TGCCACCACA GGTC CGAGGCGGCG           GCCTCCTGCTCCATC  42 204
LCP49_RS02540  543050 ..  543070 -  -3.2  -3.22475   TCCACGCGCAGAACA           TCGCCGTCC TCCA GG-CGCCGA            GCAGGCGCGGGGAGG  47 208
LCP49_RS02520 NONE
LCP49_RS02515  537358 ..  537369 -  -7.2  -2.86343   ATCCGAACCATCAGA                GGCG CCCA CGCC                 ACCTTTGTCCCCCCA  48 350
LCP49_RS02510 NONE
LCP49_RS02505  533071 ..  533093 -    -7  -3.31792   CGACTACTGTGACAA           CGAGACAGTC CAC GACTATGTCG           TTCTCTAACGGCCCC  55 498
LCP49_RS02500  531842 ..  531863 -  -5.1  -3.14132   CTCTGGCTCTACCAA           CGACGC-CGC TGA ACGCGCGTCA           CTCGAAGAAGTCCTC  46 23
LCP49_RS02495 NONE
LCP49_RS02490 NONE
LCP49_RS02485  528159 ..  528180 -  -4.3  -3.06696   CGGGGCGTTAAGAGA           CTCCGAGCC GGGT GACACGGAA            GGGACCTCGAACTCC  46 134
LCP49_RS02480 NONE
LCP49_RS02475 NONE
LCP49_RS02470  525230 ..  525243 -  -3.7  -3.14564   CTATGGGCCGACGAA               GGCGC TGGC GCGCG                GGGCCGACGTCGAGG  45 197
LCP49_RS11620  524233 ..  524248 - -10.4  -3.04263   AGCCGACGGCCAAGA              CGGACC ACGA GGTCCG               CGCCACCCTGGGCGC  57 183
LCP49_RS02455  523133 ..  523156 -  -8.8  -2.70932   CTCCCTGCTGAAGTA          CGCC-TGCACC CGG GGTGCGCGGCG          GGTGGCGCAGATCGC  52 204
LCP49_RS02435  518760 ..  518799 - -35.2  -2.63596   GCGGAGCGGACACGA  CCACGGGGCGGGCACCGA CGGA TCGGTGCCCGCCCCGTGG   TCGCGATGGGCCGGT 100 69
LCP49_RS02395  509553 ..  509569 -  -2.1  -2.70932   CGGCGCGCTCAACGA              CCTGGTG CTG CTCCAGC              CCCGCCCGTGACCTC  39 2
LCP49_RS02385 NONE
LCP49_RS02380 NONE
LCP49_RS02375 NONE
LCP49_RS02370  500507 ..  500517 -  -6.8  -3.41051   GGAGCTCCAGGAGAA                 CGAC CGC GTCG                 AGTTCGAGACCCAGG  56 299
LCP49_RS02355  498246 ..  498284 -  -6.4  -3.21276   TGCGGCTGTACAAGA   CCCGGTCGGCGGCCACGG CGG CCGTGCGCGCAGGCCACG   TGCGCATCGACGGCG  52 351
LCP49_RS02340  494850 ..  494877 -  -7.6  -3.29471   GGTGGAGGAGATGAA        GGACGTGGCC-GC GGA GCTGGACCCGTCC        ATCGTGGTCATCGGC  53 303
LCP49_RS02325  492470 ..  492526 - -32.7  -3.25823   CGGTGCGCATACCAA CGCGGGTTGAGTTATCGCGGGTG TTCAGCCGCGC CACCCGCGATAACTCAACCCGCG TTGCGGGCCGGGCCG 100 48
LCP49_RS02320 NONE
LCP49_RS02315 NONE
LCP49_RS02310 NONE
LCP49_RS02305 NONE
LCP49_RS02290  484145 ..  484161 -  -3.6  -3.47494   ATGGAACGACGAGAA              CAACGC GGCGT GCGCCG              TCCCACCTTACGCGA  50 173
        rpmB NONE
        rpmG NONE
        rpsN  482968 ..  483004 -  -2.7  -2.52896   CCAGTTGTGAACGTA    CCACCTCTCCGCGGGCG AAT CGCCCCCTGAACCGCGA    GAATCCGCGATTTCC  38 149
LCP49_RS02270  482537 ..  482572 - -22.6  -2.62184   CGCGCCCGCAGACGA    CGACGGGCGCCCCACC CGAG GGTGGGACGCCCGTCC     TGCGGCCTGCGGCGT  86 70
LCP49_RS02265 NONE
LCP49_RS02260  480968 ..  480978 -  -2.4  -2.78384   CGGCCGGGGATCAGA                 GGTC AGC GGCC                 GTCGTCGAGGTGGCC  39 17
LCP49_RS02255 NONE
LCP49_RS02250  478801 ..  478812 -  -5.8  -3.54424   GTCCATCCTCTCAAA                GCGT GCGG ACGC                 CCGGCGACGACGGGA  54 69
LCP49_RS02245 NONE
LCP49_RS02240  475655 ..  475688 -  -3.6  -3.59262   CGTCACAGGGGGAAA     GACGACGCCGCCGG GCGGGT CCGGCTCAGTCGGC      GGCCAGGGCGGCGGC  54 17
LCP49_RS02235 NONE
LCP49_RS02230  472914 ..  472941 -  -6.8  -2.90075   GTTTCCTCAACGACA        GCGTCTGCGGAG GCGC CTCCGCCGTCTC         GTCGACGAGCGCGGC  48 49
LCP49_RS02225 NONE
LCP49_RS02220  471129 ..  471149 -  -9.7  -2.90075   GCGTCTCGAAGGACA            CGATCCTGG TCA CCACGATCG            TCGCGATCCCGGCGA  53 125
LCP49_RS02210  469345 ..  469391 - -28.9  -2.62184   GCCCGCTCCACACCA CGACGACGGCCCCGGGCCCCTC ACGC GAGGGACCCGGGGCCGT-ATCG GTCCACGTCGCCCCG 100 141
LCP49_RS02195  467288 ..  467309 -  -2.2  -2.62184   CGCGGTCGGAGAGCA           GCACGGCT CAGTCC AACCGCAC            GACGACGGCCAGCGG  38 11
         dcd NONE
LCP49_RS02185 NONE
LCP49_RS02180 NONE
LCP49_RS02175 NONE
LCP49_RS02170 NONE
LCP49_RS02165 NONE
LCP49_RS02160 NONE
        mnhG NONE
LCP49_RS02125  450330 ..  450362 -  -8.9  -3.97139   GAAGGCCAAGAAGAA      GTGACCGCGCGCCCC TGA GGCGCCCGCGTGCAC      GGAGGGCCCGACCGC  71 74
        dnaK NONE
LCP49_RS02110 NONE
LCP49_RS02105 NONE
LCP49_RS02100 NONE
LCP49_RS02095  443571 ..  443589 - -10.2  -3.78934   CCCGTGGCACAAGAA             GCGGCACC ACA AGCGCCGC             CTGGTCTCCCCCGCC  72 480
LCP49_RS02075  439809 ..  439821 -  -4.7  -2.80816   TGGTCACCCATGAGA                TGGGC TTC GCCCG                CGAGGTGGCCGACCG  44 270
LCP49_RS02055  436100 ..  436113 -  -3.7  -3.14132   GGTCGGGCGGATCAA               CTCCG CGAT CGGCG                TGCTCGCCCTCGCGT  45 416
        clpB  432148 ..  432160 -  -9.1  -3.44051   GCTGGACCACCACAA                CACGC TCG GCGTG                CTCACGGCCGACTGG  60 442
LCP49_RS02035 NONE
LCP49_RS02030  429510 ..  429524 -  -3.4  -3.72576   GTTTCCCGCACGAAA               GCACGC CCG GCGCCC               GCCGTTTCCCGAACG  57 89
LCP49_RS02025  428314 ..  428351 -  -3.9  -3.53012   TTTTCGTTCGGGAAA   CGGCGGCCTCCGGAGCG TTTT CGTTCGGGAAACGGCGG    TTCACGACGCGAAGA  50 27
LCP49_RS01985 NONE
LCP49_RS01980 NONE
        purD NONE
LCP49_RS01965 NONE
LCP49_RS01960  414674 ..  414707 -   -11  -3.21924   CGATCGCGGAGAACA     TCGCCCTCGGCCGGC CCGAC GCCA-CCGAGGCCGA     GATCCAGGCGGCCGC  63 474
LCP49_RS01935 NONE
LCP49_RS01930 NONE
LCP49_RS01925  406460 ..  406485 -  -4.5  -3.64487   CGAGACCGTGAACAA         GGCCCTGGCCG AGTT CGTCCAGCGCG          GCTGGATCCGCCTGG  57 132
LCP49_RS01915 NONE
LCP49_RS01910 NONE
LCP49_RS01905 NONE
LCP49_RS01900  401750 ..  401766 -  -9.3  -2.70932   CCGTCTGCTCAAGGA              CGTGGCC GAG GGCCGCG              ACCCGGGCGACTCCA  52 178
         nth NONE
LCP49_RS01880  396743 ..  396779 - -10.8  -3.25823   CGCTGGGGACACGAA   CCCGCCCTCCGGCGCCT GTGC AGGAGC-GGACGGCGGA    GCGCAGCCGTCAGTC  61 35
LCP49_RS01875 NONE
LCP49_RS01870 NONE
LCP49_RS01865 NONE
LCP49_RS01860 NONE
LCP49_RS01855  392810 ..  392833 -  -5.1  -3.09492   GCGGCAACCGCAACA          GCCCGCTGG ACAAGG CCGGCGCGC           TGACCGTCCTGCGGT  48 60
LCP49_RS01840 NONE
LCP49_RS01835  386851 ..  386867 -  -3.5  -3.44051   CGCTGACCACGATAA              CGCCCGG CGT CCCCGCG              CCCGCCACCACCCGA  49 44
        topA NONE
LCP49_RS01825 NONE
LCP49_RS01820 NONE
        proC  381041 ..  381052 -  -3.6  -3.01712   TGGTGGGTGTGAAGA                CCCC GGGC GAGG                 ACTTCACCTACGCCC  43 142
LCP49_RS01800  377576 ..  377615 -  -9.3  -3.21276   TTCTCGGCCACAATA CCGGCCGCACGGGCCGCGGT CGA ACCG-GGAC-GCG-GGCCGG CTCAGTCGAACCAGG  59 27
LCP49_RS01795  377293 ..  377322 - -22.9  -3.21099   GCCGTCCACGACGAA       GCCGCCGTCCCCC CGGA AGGGGACGGCGGC        TTCGTCTCGTCAGCG  95 58
LCP49_RS01790  376642 ..  376675 -  -7.4  -2.78384   GGTCCGTCGAGCAGA     TGGATCTGC-CCGCC GACCA GGCGGAGCAGATGCG     CGCCATGATGGAGGG  47 339
LCP49_RS01780 NONE
LCP49_RS01775 NONE
LCP49_RS01770 NONE
LCP49_RS01765 NONE
        ccsB  370661 ..  370673 -  -6.9  -3.21747   CCATCCTACGAGGAA                GGACG CCC CGCCC                GCCGACCGCCCAGCC  53 479
LCP49_RS01750  370049 ..  370093 - -12.6  -2.73994   AGGTCGGGAAGATGA CGCTGGCCGCCCGCCTGGGC GACGG ACCCGCGCGGGCGTCCTACG GCGTCATGCTGGCCG  59 298
LCP49_RS01710 NONE
LCP49_RS11615  360309 ..  360327 -  -7.3  -3.06696   GCGTTCGGGAACATA             GGCGACC GTTAT GGACGCC             TTCGACTGCTCATGA  50 154
LCP49_RS01700 NONE
LCP49_RS01680  352685 ..  352723 - -14.4  -2.78384   TCCCGCCGGACGAGA   CCGCCGACTGAGCCGACG GTC CGGCGCCCCGGTCAGCGG   GGGCGCACGACGACG  64 19
LCP49_RS01670 NONE
LCP49_RS01665 NONE
LCP49_RS01660 NONE
LCP49_RS01650  346442 ..  346456 -    -7  -3.16564   CGGTCAGTCTAGGAA               GGGCGC TCG GCTCCC               GTTCCGACGGGGCGC  50 76
LCP49_RS01645 NONE
LCP49_RS01640 NONE
        menD NONE
LCP49_RS01630 NONE
LCP49_RS01625  338198 ..  338231 - -11.5  -3.14132   GGCGCTGGCCATGAA     GCGCGCGTGGGCCCC GGAC GGGGTCTCCACGCGC      CAGCACAACGAGCCC  61 249
LCP49_RS01605 NONE
LCP49_RS01600  333484 ..  333508 - -14.2  -3.05384   CCTCCCGCCACGGAA          CCCCGCGCCC GCTCA GGGCGTGGGG          TTCCGTGCGTCGTAG  67 13
LCP49_RS01585  331947 ..  331974 - -22.8  -3.32844   CCCCGGACGGCAGAA        GACCCCGGGACC GTAC GGTCCCGGGGTC         TTCGTTCCGGTGGCA 100 36
LCP49_RS01580  329747 ..  329761 -  -3.4  -2.82015   TGGACACGGACGAGA               CCGCGC TCT ACGCCG               TCGGCCGAGCGGGCG  42 274
LCP49_RS01565 NONE
LCP49_RS01560  325224 ..  325253 -  -3.5  -3.54935   GAAACCGCCCCCAAA       TCTCTGACACG GACGTCGG CGGGTCAGAGG        CTGCCCAGAGCCCGC  50 19
LCP49_RS01555 NONE
LCP49_RS01545  320763 ..  320806 -    -5  -4.18018   GGGGCCGATGCAAAA TCGGCCCCGGTCACGGCCTCC GGC GGGGTCCGC-ACCCCGGCCGG ATCAGCGGCGGGCGC  67 27
LCP49_RS01540  320601 ..  320638 - -11.9    -3.484   GCCACGACACGAGAA   CGCCCGCACTCACGG TTTTCACG CCGCGAGGGCGGGCT    CTCATGTCAGAGCCC  68 33
LCP49_RS01535  320471 ..  320503 - -17.8  -3.66178   CCCCGGAACGCGAAA     GGACCCGGCC-CCTC CGAG GAGGTGACCGGGTCC      GTCCGATTCCGTAGC  91 36
LCP49_RS01530 NONE
LCP49_RS01525 NONE
LCP49_RS01520 NONE
LCP49_RS01515  317874 ..  317900 - -10.1  -3.53012   TTGTCGTTCGGGAAA        CGGCGCCCGCCC CGCC AAG-GGGCGCCG         TTTCCCGAACGAAAG  65 80
LCP49_RS01475  311248 ..  311274 - -17.3  -2.63596   CGCCATGGCAGATCA        CGGCGCGGCCCG ACAG CGGGCCGCG-CG         TCCTCAGCGCTGGCC  73 177
LCP49_RS01470 NONE
LCP49_RS01465 NONE
LCP49_RS01445 NONE
LCP49_RS01440  304006 ..  304025 -  -6.3  -3.25823   CGTGGCGGAGATGAA            GACGGCG TTCGAC CGCCGGC             GCCGGGCCATGGTCG  52 366
LCP49_RS01430 NONE
        secE NONE
        nusG NONE
        rplK NONE
        rplA  300121 ..  300178 - -31.6  -2.74605   GGCCCGCAAAATCGA CCCGGGACGACGCCGGCCGGTCGTCCCCG CTG CGGGGACGACCGGCCGACGTCGT---GGG CCCCGATCACCGGGG 100 50
        rplJ NONE
        rplL NONE
        rpoB NONE
LCP49_RS01390  290926 ..  290943 -  -2.5  -4.08767   CGCAGGCGTGCAAAA             GTGTGGC ATCT GCCGCGC              AATGACCCCGCGACC  60 187
        rpsL NONE
        rpsG  289903 ..  289952 - -21.4  -2.62184   GCCCGTCCGAGAGGA CGCACC-TGCGGCCCGGGGCGCG GATCG CGCGCCCCGGGCCACACGGATCA CCAGCGGTAGTGGGC  83 23
        fusA  287471 ..  287485 -  -3.4  -3.63515   GTTCATCGTCAAGAA               GACTGC TCA GCCGCC               TGCGACGTGCTGACA  54 258
         tuf  286184 ..  286195 -  -7.2  -3.01712   CCCGCCTCCGGAAGA                CCCG GAGA CGGG                 GGCGTCGCACGTCAG  49 76
LCP49_RS01365  285956 ..  286000 -  -7.8  -3.04144   CCGTGACGGCGAACA GGCGGCGCGG-GCTGG-GCA GGCTCAT CGCTCCAGCTCCCCGCCGCG GTTCGCACGCCGGAT  52 2
LCP49_RS01360  285464 ..  285499 - -25.4  -3.65656   TCAGTATAGACAGAA    CCGGGCCCGGTCCGCC AATC GGCGGGCCGGGCCCGA     CGGCCCCCCGGGCTC 100 39
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW  283247 ..  283281 -  -4.2  -3.14344   CAGTTCCTCGATTAA    GTGGTCTCCGCACGCC GATCA GGCGAGC-G-GACCTC    CGAAGATGTCGATGG  44 9
        rplB NONE
        rpsS  282066 ..  282106 - -11.8  -3.30124   TTCGATTCTCGAGAA GGTCAAGCG-TGCTGTGCC CTCA GGCTCAGCGGCGCTTGCCC  TTCTTGTCGTCCTTC  64 10
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ  279821 ..  279850 - -26.5  -3.42354   GAGTCTAACGCACAA       GGCCGCCCCGTGC CAGT GCACGGGGCGGCC        CTCTGCGTCGCCGGC 100 60
        rplN NONE
        rplX NONE
        rplE NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO  275316 ..  275338 - -10.4  -2.78384   GGGCGGGGCACGAGA           CGGCGGCCAC ACC GGGGCGGCCG           CTGTGCGAGTCTACA  55 111
        secY NONE
LCP49_RS01250 NONE
         map  272379 ..  272423 - -18.4  -2.72012   AACCAGCACAGACGA CGACGGCCGCCCGGTCCGCC GGACG GGCGGGACGGACGGCCGACA GCTCGGGCCGCTCAC  77 37
        infA NONE
        rpmJ  271689 ..  271733 -  -3.2  -3.01712   CGGCGCCGGGGAAGA TCCGGCGTGCTCCG-CGGCGG GCGT CCGCCGTCGTCGGTCTCCGGC CCCTGCGGCCGGAGG  43 152
        rpsM NONE
        rpsK  270650 ..  270697 -  -4.7  -3.53012   CGCGGTGGGTGGAAA CGAGGACGGGGTGGGGGCAGGTC CGCA GACCTGTCCGCGTCC-G-CCCCG GGCGGGGGCGGACGC  52 57
LCP49_RS01220 NONE
        rplQ NONE
LCP49_RS01210  267762 ..  267779 -  -6.2  -4.18018   GCCCCGGAGCCAAAA             GCCGCC GCCGCG GGCGAC              CCCGGCTCACAGGGT  69 32
        rplM  267040 ..  267077 -    -7  -3.05384   GTTCTCCTCAGGGAA  GGTCTGCGTCAGTGGCCC GCCG GGGTCACTGG-GC-GACC   TGGCCGATCTCGAAG  50 13
        rpsI  266423 ..  266437 -  -5.6  -2.62184   TGCGCCTTCATATTA               CCCCTG GGT CAGGTG               CCGCCGGCCCACGGA  44 123
        ppk2 NONE
        glmM NONE
LCP49_RS01180  262486 ..  262519 -  -2.4  -3.72324   GATGCCGATGAACAA    GATGATCGAGGC-CCG CAAC CGCCGCCTCGG-CATC     GACCCCGCCGAGGAG  54 228
        galE  259212 ..  259226 -  -5.6  -3.27653   ATGCGCACGAGAATA               CCGGAC CGG GCCCGA               CTTCGGCGCACGGCG  51 48
        glmS  257189 ..  257204 -  -4.6  -2.98823   GCGGGGTGACATAGA              TCACCC AGTC GGGTGT               GGTCACACTCTAGCC  45 148
LCP49_RS01150  255870 ..  255881 -  -2.2  -2.62396   GATCCGCTCAGACGA                GTCGG GCT CCG-C                GGGCGGCCATGTCCG  38 6
        glgX NONE
LCP49_RS01140 NONE
LCP49_RS01135 NONE
LCP49_RS01130 NONE
         alr NONE
        tsaE NONE
        tsaB NONE
LCP49_RS01110 NONE
        tsaD  246734 ..  246767 -  -3.7  -3.01712   GGCGTGGCGGCAAGA     GGCCGGGCGCGCTCAG ACG CTGA-CGACCTCGACC     GGCTGTCCCGGGTCC  43 4
LCP49_RS01100  245814 ..  245832 -    -3  -3.62046   GGACGGCTGGAAGAA             CCTGAAGG AGG CCGTCACG             AACCTGGCGGATCGC  55 358
LCP49_RS01070  239677 ..  239714 - -14.1   -2.6472   GAATACCGTACACGA   GGGTGCCGT-AATCCCCC AAC GGGGGTTCGACGGCTCCC   GCCGCCCGGGGCCCG  63 56
LCP49_RS01065 NONE
LCP49_RS01060 NONE
LCP49_RS01055 NONE
LCP49_RS01050  235503 ..  235540 -  -8.3  -3.61268   CACGGAACCTGGAAA   CACG-CGGGTCCTGCCCC CGG AAGGCGAGACCCGGCGGG   TTCTGCCCACGGAAC  63 107
       groES NONE
        groL NONE
LCP49_RS01030  229265 ..  229286 -  -5.1  -3.21099   GGGCGCCACCACCAA           GATGGACGGC TGC GCCG-CGATC           TACCCGGCCGTGGCC  50 447
        guaB  226535 ..  226554 -  -3.4  -2.52464   CCCCCCCGGAACCGA            CGTGCGGG TCAG CGCGAACG             GTAGTTCGGGGCCTC  39 14
LCP49_RS01015 NONE
LCP49_RS01010 NONE
LCP49_RS01005  223741 ..  223765 -  -7.8  -2.78596   CACCCGTCCAGGATA         GTCGAGGCGCT CAGT AGCGCCGCG-C          GGCGTCCGGGAAGCG  50 11
        guaA NONE
LCP49_RS00995 NONE
LCP49_RS00990  217678 ..  217708 -  -5.9  -3.29511   CGGATCCCCCCAGAA       CCGCGCGCCCCGG CGCGC CCCGAGCGAGCTG       GAGCTGAGCATGCCC  51 334
LCP49_RS00975 NONE
LCP49_RS00970  214793 ..  214824 -    -5  -3.15861   GAGCACCTTCAGGAA      CGTGCGGGCCACGAC GCC GTCGTCGCCGGT-CG      CCTCGACGGCCAGGA  46 469
LCP49_RS00965  213611 ..  213626 -  -4.6  -2.78463   AGGTGGCCGACTACA              CGGACA CCCG CGCCCG               GGCCCTGTGGTCGCT  42 408
LCP49_RS00955 NONE
LCP49_RS00950  210289 ..  210304 -  -6.1  -2.78384   GCGGTGTGCATCACA              GTCGC GGTCGT GCGAC               GCGGGCCGGCACCCC  45 55
LCP49_RS00945 NONE
LCP49_RS00940 NONE
LCP49_RS00935  207331 ..  207368 - -26.3  -3.85698   CTTTCGTTCGAGAAA   CGGCG-GGGGCGGGGGCC GAC GGCCCCCGCCCCACGCGG   CTTGCTCCCGACGTC 100 43
LCP49_RS00920 NONE
LCP49_RS00915  202814 ..  202828 -  -5.6   -3.0497   AGATGACCTCGAACA               CGGCCA CCG CGGCCA               CGTTCCTGCCCGTCG  46 403
LCP49_RS00895 NONE
LCP49_RS00890  198226 ..  198240 -  -3.4  -3.50808   CTGATCACAACAACA               GCACGC CCG GCGAAC               CTATTCCAGAAATCT  50 95
LCP49_RS00885  197356 ..  197374 -  -8.8  -3.36803   GAAGCGGACCCACAA             CACCGTGT ACC ACCCGGTG             GGCTCGGTGCGCATG  58 328
        ychF  195618 ..  195646 -  -5.2  -3.35088   AAATGGCGTAAGCAA        CGCGCCGGTTCA CACGT TGAACCGGAACT        CCACCACGTCGCCGT  51 6
LCP49_RS00870  193269 ..  193314 -  -6.7  -2.75382   GAGGCCACCTAACTA GCGCGGCCGCAGGGGCAAAGCA TTC CGTTTCGAC-CTGCGGGCGAGC TCCCGTCCGAGGACC  47 66
LCP49_RS00840 NONE
LCP49_RS00835 NONE
LCP49_RS00830  187352 ..  187368 -  -2.2  -3.63515   CGTGATCGTCAACAA              CGCC GACCGCAAG GGCG              CCCACATCCTCGCCA  54 374
LCP49_RS00790  180025 ..  180035 -  -6.8  -3.05596   CATGGTCGTACGCAA                 CCGA ATC TCGG                 GCAAGGGTGACGGTG  50 79
LCP49_RS00785 NONE
LCP49_RS00780 NONE
LCP49_RS00775  177133 ..  177148 -  -4.6  -2.61264   CTCGGCATGGACAAC              GGGACG ATCA CACCCC               TGGTGCGGCGCCTGG  41 278
LCP49_RS00760 NONE
LCP49_RS00755  175865 ..  175896 -   -23  -2.62983   GGCAGGGTGAGATCA      CGCCGGCTCCGGGC ACGT GCCCGGAGCCGGCC       CAGGGCCGCAGGACC  89 51
LCP49_RS00745 NONE
LCP49_RS00740 NONE
LCP49_RS00730  168689 ..  168717 -  -3.9  -3.59979   CGCCTGGAGGCCAAA       CGCCGT-CGCTCC GAGGT GAAGCGCAC-GCG       CCGCCGCCCCGGCCT  54 75
LCP49_RS00710  163288 ..  163330 - -11.9  -2.87132   CCCGCCCCGCACACA CCACGGCCCCCTCCCTG TCTGCAGCT CCGGGACGGGGCCGTCG TCGGGACTGGCGGTG  60 41
LCP49_RS00700 NONE
LCP49_RS00695 NONE
LCP49_RS00690 NONE
LCP49_RS00685  157974 ..  158002 -  -8.8  -3.18681   CCTGAAGGCGATCAA        GGACCACGGCGT GAAGA ACGTCGTGTTCC        TCACCGGCGACGTCC  56 367
LCP49_RS00655  151284 ..  151296 -  -4.7  -3.61398   CCTGCGCGGGAAGAA                GGCCG CGC CCGCC                CACTGATGCGGCGGC  56 158
LCP49_RS00640  148673 ..  148686 -  -3.7  -3.28712   CGCGGGGTTCGAGAA               GGTCC TCGT GGTCC                TGACCCGGGAGCGCG  47 361
         tpx  147464 ..  147522 -  -3.1  -2.52635   AGCGCGATGACGAAC GCCAGGGGCGAGCGTCGTGCGCGCGGCGG CCAGC CCGGCG-GCGT-C-ACGCTCAGCCCCGG- GCGGCCGCCAGGGCG  39 16
LCP49_RS00625  146001 ..  146041 -  -7.4  -3.28924   GATGGCCGTGCACAA CGTGCCGGA-GGGCGTGGC CGTG GCCGTGCCCGTGCGGCAGG  CCACCGGGTCGCGGC  53 313
LCP49_RS00615  143885 ..  143898 -  -2.3  -3.55444   TTCCGATTCGCGAAA               GTCCG GATC CGGAT                CCGTCTCAGCCGTGT  49 108
LCP49_RS00610 NONE
LCP49_RS00605 NONE
LCP49_RS00600 NONE
LCP49_RS00595  137122 ..  137138 -  -7.9  -2.78384   CGCGCGGTCAGTAGA              CGCCCTC GCC GAGGGAG              GCGAGGAACTCGCGG  50 1
        typA NONE
LCP49_RS00585  134494 ..  134507 -  -6.7  -2.95223   CAACGCGATCACATA               GGTCA TGAC TGACC                GTCCACCTCTCTCTG  49 14
LCP49_RS00580 NONE
        dapC  132962 ..  133004 -  -5.3  -3.32769   GCTCCAAACTATCAA GGACCGGC-CCGGGGCGCGC GATC GCTTCCCCCGACGACGGCCC TCGGCCCCGGCTCAG  51 37
LCP49_RS00570  131504 ..  131558 - -44.8  -2.52464   GCTCCGGCGAACGCA TTGGGGGCGGTTTCGGGTGGTATTCC GTC GGAATACCACCCGAAACCGCCCCCAA ACGCAGGGTCAGCGC 100 48
        dapE NONE
LCP49_RS00530 NONE
LCP49_RS00525  123276 ..  123319 -  -6.7  -3.53012   CGTGCTCGCGCCAAA CGATGGCCCGCACCGAGCC-CG GCC CGCGACTCAG-GCGCGCC-CCG CCGGATCGCTCCGGG  57 12
LCP49_RS00520 NONE
LCP49_RS00510  121121 ..  121162 - -14.3  -2.80994   CCCAACTCTACTAGA GCGGCACCG-CCCCACAGCC CGG AGCCGCGGGGGCGGGGCGGC TCAGCCGCGGGGGCG  65 26
LCP49_RS00505  120129 ..  120147 -  -5.9  -2.78463   AGCTGGCGGAGCAGA             CGGGCCA GACCG TGGCCGG             GGTCGTGGAGAACAT  46 372
LCP49_RS00485  116164 ..  116190 -  -7.9  -2.62396   CACGGGCGGAGATCA        CGG-ACGCCGCG ATGG CGCAGCGGGCCG         AGGCCGCGATGCTGA  48 166
LCP49_RS00470  111884 ..  111916 - -11.2  -2.70932   CTTCTGCGCGAATGA      CCCTTCTGACCGCC TGCGC GGCGGCTGGAAGGG      TCATTCGCGCAACCG  55 71
        hemE NONE
LCP49_RS00435 NONE
LCP49_RS00430 NONE
LCP49_RS00425 NONE
        hemC NONE
LCP49_RS00415   98531 ..   98550 - -11.4  -3.39327   CTTCTACACGGAGAA            CGTGCGCA TGCT CGCGCACG             CGTACGACCTGACGG  65 253
        hemB NONE
        hemL   93206 ..   93252 -  -5.8  -3.30124   GGTGACCCTGGAGAA CGCGCACACCTCCGCGGCGGACG CCCT CG-CCGCCGTCCAGGTG-GC-CG ACGCCCTGGCCGCCC  50 221
LCP49_RS00380 NONE
LCP49_RS00375 NONE
LCP49_RS00370   84853 ..   84869 -  -2.1  -3.44051   CCTGCACGAGGACAA              CCTGCTC CTC GAGCGCG              GCCGCGTGGTGGGCG  48 485
LCP49_RS00360   83110 ..   83120 -  -2.4  -2.88663   ATCTATTCTCAGACA                 CGCC CTA GGTG                 TAGGAGGGCATGACG  40 19
LCP49_RS00355 NONE
        nudC NONE
LCP49_RS00345   78879 ..   78894 -    -6  -3.05596   CACGCGCCGAGTGAA              GGTCCG CCCC CGGCCC               GGCTGCGCCTGCGAC  48 110
LCP49_RS00335   77071 ..   77087 -  -3.5  -3.24747   GCGCGAGACCATGAA              CCGCCGC CGC GCCTCGG              GTGGCCCGGCCGAAC  47 377
LCP49_RS00325 NONE
LCP49_RS00320 NONE
LCP49_RS00315   71167 ..   71190 - -19.6  -3.32844   CCGGGCATGCGAGAA          GGCCCCCAGC AGAT GCTGGGGGCC           TTCTCCTTCTCGTTG  90 37
LCP49_RS00290 NONE
LCP49_RS00285   64052 ..   64110 - -19.1  -2.57795   CCGAGCACCAACTGA GAGGTCCCGCAGGGGGAGGGCCGACGACG CGTCC CGTCGTCGGCCCTCCCC-TGCGGG-CA-- CGGTTCAGAACCCGG  76 30
LCP49_RS00255   57869 ..   57879 -  -2.4   -2.7674   GAGATCAGCCAATGA                 GGGG CCT CTCC                 TTCGGGTACTCGAAG  39 4
LCP49_RS00250 NONE
LCP49_RS00245 NONE
        mnmA NONE
LCP49_RS00235 NONE
LCP49_RS00230   53187 ..   53199 - -10.5  -2.79302   ATCAGCCCGATGATA                CCCGC CGG GCGGG                CCCGTCCACGGCCGA  57 79
        mtrA NONE
        mtrB NONE
LCP49_RS00215 NONE
LCP49_RS00210 NONE
        raiA NONE
        secA   43623 ..   43662 -  -5.7  -3.08679   CGCCCGCACCGAACA GGGGCGCGAG-GAGCTG-CG TCG CGTCCGCTCGCTCGC-CGCC GTGATCGCCGTCGCC  48 452
LCP49_RS00185   41903 ..   41921 -  -6.7  -3.44622   GAGCGTCAGAAGGAA            GTGACGCG CGCC CGCGTC-C             GGGAGTGGACCGAGA  54 76
LCP49_RS00175 NONE
LCP49_RS00170 NONE
LCP49_RS00165   37699 ..   37725 - -11.5  -3.14132   GCGGCGCGCCATGAA        GCGCCGCGCGGC GCGC GCC-CGCCGCGC         CTCCTGACCCACCCG  62 95
LCP49_RS00155   36551 ..   36569 - -13.2  -3.28712   GGGCCCCGGCGAGAA             GTTCACCG GCC CGGTGAAC             TGACCACGGCCCCGA  68 96
        infC NONE
        rpmI NONE
        rplT NONE
LCP49_RS00130   32972 ..   33001 - -25.1  -3.39327   CCCGGACACGCAGAA       GGGGCGGGGATCC ACGC GGATCCCCGCCCC        TTCTGCGTGTCCGGA 100 67
LCP49_RS00115   30402 ..   30437 -  -2.5  -2.82516   CCGGCTACGAGCAGA   TGTACG-CCCGGTCCGC CTAC GCGC-CCGAGTCGTACC    GTCGCATGCTCACCC  41 215
LCP49_RS00105   28650 ..   28671 -  -4.3  -2.71263   AACGTCTTCGAACGA           CGCGC-GAGC CTG GCCCTGGGCG           GCTACATCGAGCGGC  42 118
        pheS NONE
        pheT NONE
LCP49_RS00080   23243 ..   23253 -  -8.2  -3.29144   GGACTGGGTGTACAA                 GCGC GGC GCGC                 TCACCGTGGAGGCGC  55 262
        argC NONE
        argJ NONE
        argB NONE
LCP49_RS00045 NONE
        argF NONE
        argR   10898 ..   10934 - -33.9  -2.79183   CGGACCGGTACCACA    CGAGGAAGGCCCCCGCC GTC GGCGGGGGCCTTCCTCG    TGCCTGGTGCCCGTC 100 70
LCP49_RS00025 NONE
        argH NONE
LCP49_RS00015    3806 ..    3826 -  -4.5  -3.14527   GAAGCCGCAGTAATA            CGAGACGGG CTC CCCGGCCAG            CGCCTGCTCCAGCGC   0 233
